Pregenerated sensors for DNAJB7 (Homo sapiens)
Ensembl gene IDs: ENSG00000172404Ensembl transcript IDs: ENST00000307221.5
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTGAACCTGTGTGTCTTGATACATTCTTGTCTTCTAATGCTATGCATGTTTCGTTCACCCAAGCTGGAGTaGAGTGGCGTGATCCCATTA | + |
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Preference number: 2 (lower is better) Translates to: LNLCVLIHSCLLMLCMFRSPKLE*SGVIPL Trigger: TAATGGGATCACGCCACTGCACTCCAGCTTGGGTGA...ACGAAACATGCATAGCATTAGAAGACAAGAATGTATCAAGACACACAGGTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| 3UTR-3UTR CCA 90 bp | ATACTAATTGTCCGCAGTCTCTTCTATAGAATAAATAACCTTTCCTTCTCCCATCAAGCTGGAGTGCAGTaGCGTGATCCCATTACACTG | + |
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Preference number: 2 (lower is better) Translates to: ILIVRSLFYRINNLSFSHQAGVQ*RDPITL Trigger: CAGTGTAATGGGATCACGCCACTGCACTCCAGCTTG...ATGGGAGAAGGAAAGGTTATTTATTCTATAGAAGAGACTGCGGACAATTAGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| 3UTR-3UTR TCA 90 bp | ATACTAATTGTCCGCAGTCTCTTCTATAGAATAAATAACCTTTCCTTCTCCCATCCATACAGACTGCTCTaGGGAATTCAGGATAAGACT | + |
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Preference number: 2 (lower is better) Translates to: ILIVRSLFYRINNLSFSHPYRLL*GIQDKT Trigger: AGTCTTATCCTGAATTCCTCAGAGCAGTCTGTATGG...ATGGGAGAAGGAAAGGTTATTTATTCTATAGAAGAGACTGCGGACAATTAGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| 3UTR TCA 72 bp | AGGTCTCATTATGTTACCCGGACTGTCGTGAAATTCTaGCTTCAACCCTCCTGCCTGGGCCTCCCAAGATGC | + |
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Preference number: 3 (lower is better) Translates to: RSHYVTRTVVKF*LQPSCLGLPRC Trigger: GCATCTTGGGAGGCCCAGGCAGGAGGGTTGAAGTCAGAATTTCACGACAGTCCGGGTAACATAATGAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| 3UTR TCA 72 bp | ACAAAAATAGAAAATTTCCTGTCTGGAGTGATTCACTaGTGGCCTACCATACAGACTGCTCTGAGGAATTCA | + |
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Preference number: 3 (lower is better) Translates to: TKIENFLSGVIH*WPTIQTALRNS Trigger: TGAATTCCTCAGAGCAGTCTGTATGGTAGGCCATCAGTGAATCACTCCAGACAGGAAATTTTCTATTTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR TCA 90 bp | CTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGCTTCCCGAGTAGCTGGGACCTCTTTGACTCCTGCTaGGAAAATAGGGGGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: LCLPGSSSLSTSFPSSWDLFDSC*ENRGIS Trigger: AGAGATCCCCCTATTTTCTCAGCAGGAGTCAAAGAG...GTCCCAGCTACTCGGGAAGCTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR TCA 90 bp | CTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGCTTCCCGAGTAGCTGGGACCTGGCTTATGGAATGTaGAGCCGTACTCACATTCAT | + |
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Preference number: 4 (lower is better) Translates to: LCLPGSSSLSTSFPSSWDLAYGM*SRTHIH Trigger: ATGAATGTGAGTACGGCTTCACATTCCATAAGCCAG...GTCCCAGCTACTCGGGAAGCTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR TCA 90 bp | AAGCTGGAGTGCAGTGGCGTGATCCCATTACACTGCAACCTATGTCTTCCAGGCCCATACAGACTGCTCTaGGGAATTCAGGATAAGACT | + |
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Preference number: 4 (lower is better) Translates to: KLECSGVIPLHCNLCLPGPYRLL*GIQDKT Trigger: AGTCTTATCCTGAATTCCTCAGAGCAGTCTGTATGG...GCCTGGAAGACATAGGTTGCAGTGTAATGGGATCACGCCACTGCACTCCAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR CCA 90 bp | AAGCTGGAGTGCAGTGGCGTGATCCCATTACACTGCAACCTATGTCTTCCAGGCACAGATAGTTGGAAGTaGGTGTGCTGGGTATTGAGA | + |
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Preference number: 4 (lower is better) Translates to: KLECSGVIPLHCNLCLPGTDSWK*VCWVLR Trigger: TCTCAATACCCAGCACACCCACTTCCAACTATCTGT...GCCTGGAAGACATAGGTTGCAGTGTAATGGGATCACGCCACTGCACTCCAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR TCA 90 bp | CTCACTATACTGCCCAGGCAAATTCTTATTAGCACCAACTGTCACCACAAACTCGGGTGTGCTGGGTATTaGGAACCGTGGTTTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LTILPRQILISTNCHHKLGCAGY*EPWFPQ Trigger: CTGAGGAAACCACGGTTCTCAATACCCAGCACACCC...GAGTTTGTGGTGACAGTTGGTGCTAATAAGAATTTGCCTGGGCAGTATAGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR TCA 90 bp | GATCCCATTACACTGCAACCTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGACTGTCGTGAAATTCTaGCTTCAACCCTCCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: DPITLQPMSSRLKQSFYQTVVKF*LQPSCL Trigger: CAGGCAGGAGGGTTGAAGTCAGAATTTCACGACAGT...CTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAGGTTGCAGTGTAATGGGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR GCA 90 bp | GATCCCATTACACTGCAACCTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGAGTTGGAAGTGGGTGTaGTGGGTATTGAGAACCGTG | + |
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Preference number: 4 (lower is better) Translates to: DPITLQPMSSRLKQSFYQSWKWV*WVLRTV Trigger: CACGGTTCTCAATACCCAGCACACCCACTTCCAACT...CTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAGGTTGCAGTGTAATGGGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR CCA 90 bp | AAGCTGGAGTGCAGTGGCGTGATCCCATTACACTGCAACCTATGTCTTCCAGGCGTTTTAACAGATAGTTaGAAGTGGGTGTGCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: KLECSGVIPLHCNLCLPGVLTDS*KWVCWV Trigger: TACCCAGCACACCCACTTCCAACTATCTGTTAAAAC...GCCTGGAAGACATAGGTTGCAGTGTAATGGGATCACGCCACTGCACTCCAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR CCA 90 bp | CTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGCTTCCCGAGTAGCTGGGACAGAAAATTTCCTGTCTaGAGTGATTCACTGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: LCLPGSSSLSTSFPSSWDRKFPV*SDSLMA Trigger: GGCCATCAGTGAATCACTCCAGACAGGAAATTTTCT...GTCCCAGCTACTCGGGAAGCTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR TCA 90 bp | GATCCCATTACACTGCAACCTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGTCTGGAGTGATTCACTaGTGGCCTACCATACAGACT | + |
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Preference number: 4 (lower is better) Translates to: DPITLQPMSSRLKQSFYQSGVIH*WPTIQT Trigger: AGTCTGTATGGTAGGCCATCAGTGAATCACTCCAGA...CTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAGGTTGCAGTGTAATGGGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR GCA 90 bp | CTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGCTTCCCGAGTAGCTGGGACGGAGAAAAAGTATCCTaGATCTCTGTTTCTGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LCLPGSSSLSTSFPSSWDGEKVS*ISVSVS Trigger: GGAAACAGAAACAGAGATGCAGGATACTTTTTCTCC...GTCCCAGCTACTCGGGAAGCTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR CCA 90 bp | CTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGCTTCCCGAGTAGCTGGGACGATATTCACTGGCAGTaGAGAAAAAGTATCCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: LCLPGSSSLSTSFPSSWDDIHWQ*RKSILH Trigger: ATGCAGGATACTTTTTCTCCACTGCCAGTGAATATC...GTCCCAGCTACTCGGGAAGCTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR CCA 90 bp | CTCACTATACTGCCCAGGCAAATTCTTATTAGCACCAACTGTCACCACAAACTCCAAGCTGGAGTGCAGTaGCGTGATCCCATTACACTG | + |
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Preference number: 4 (lower is better) Translates to: LTILPRQILISTNCHHKLQAGVQ*RDPITL Trigger: CAGTGTAATGGGATCACGCCACTGCACTCCAGCTTG...GAGTTTGTGGTGACAGTTGGTGCTAATAAGAATTTGCCTGGGCAGTATAGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR TCA 90 bp | CTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGCTTCCCGAGTAGCTGGGACCATTTGCTCGATATCTaGTGTATTTGTAACCCATCT | + |
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Preference number: 4 (lower is better) Translates to: LCLPGSSSLSTSFPSSWDHLLDI*CICNPS Trigger: AGATGGGTTACAAATACATCAGATATCGAGCAAATG...GTCCCAGCTACTCGGGAAGCTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR GCA 90 bp | GATCCCATTACACTGCAACCTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGGGATTTTTATCAGGGTaGCATTTAAGTGCCACTTTA | + |
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Preference number: 4 (lower is better) Translates to: DPITLQPMSSRLKQSFYQGFLSG*HLSATL Trigger: TAAAGTGGCACTTAAATGGCACCCTGATAAAAATCC...CTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAGGTTGCAGTGTAATGGGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR CCA 90 bp | CTGAACCTGTGTGTCTTGATACATTCTTGTCTTCTAATGCTATGCATGTTTCGTGGTCACACTCTCAGCTaGAGTGCAATGGCAAGATCA | + |
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Preference number: 4 (lower is better) Translates to: LNLCVLIHSCLLMLCMFRGHTLS*SAMARS Trigger: TGATCTTGCCATTGCACTCCAGCTGAGAGTGTGACC...ACGAAACATGCATAGCATTAGAAGACAAGAATGTATCAAGACACACAGGTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR TCA 90 bp | CTCACTATACTGCCCAGGCAAATTCTTATTAGCACCAACTGTCACCACAAACTCTCCACGAAAGTATATTaGGATACATGTTTGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LTILPRQILISTNCHHKLSTKVY*DTCLEL Trigger: CAGCTCCAAACATGTATCTCAATATACTTTCGTGGA...GAGTTTGTGGTGACAGTTGGTGCTAATAAGAATTTGCCTGGGCAGTATAGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR GCA 90 bp | ATACTAATTGTCCGCAGTCTCTTCTATAGAATAAATAACCTTTCCTTCTCCCATTCACCCAAGCTGGAGTaGAGTGGCGTGATCCCATTA | + |
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Preference number: 4 (lower is better) Translates to: ILIVRSLFYRINNLSFSHSPKLE*SGVIPL Trigger: TAATGGGATCACGCCACTGCACTCCAGCTTGGGTGA...ATGGGAGAAGGAAAGGTTATTTATTCTATAGAAGAGACTGCGGACAATTAGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR GCA 90 bp | CTGAACCTGTGTGTCTTGATACATTCTTGTCTTCTAATGCTATGCATGTTTCGTACAGGTGTGAGCCACTaGACCCAGCTAAGTCTATTT | + |
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Preference number: 4 (lower is better) Translates to: LNLCVLIHSCLLMLCMFRTGVSH*TQLSLF Trigger: AAATAGACTTAGCTGGGTGCAGTGGCTCACACCTGT...ACGAAACATGCATAGCATTAGAAGACAAGAATGTATCAAGACACACAGGTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR TCA 90 bp | CTCACTATACTGCCCAGGCAAATTCTTATTAGCACCAACTGTCACCACAAACTCGTATTTGGCCAAAGTTaGATAAGTTTTAGTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LTILPRQILISTNCHHKLVFGQS*ISFSAA Trigger: AGCAGCACTAAAACTTATTCAACTTTGGCCAAATAC...GAGTTTGTGGTGACAGTTGGTGCTAATAAGAATTTGCCTGGGCAGTATAGTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR TCA 90 bp | CTGAACCTGTGTGTCTTGATACATTCTTGTCTTCTAATGCTATGCATGTTTCGTTTGGTGAATAGTTGTTaGATGACTGTGTTCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LNLCVLIHSCLLMLCMFRLVNSC*MTVFSS Trigger: GCTGGAGAACACAGTCATTCAACAACTATTCACCAA...ACGAAACATGCATAGCATTAGAAGACAAGAATGTATCAAGACACACAGGTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR TCA 90 bp | ATACTAATTGTCCGCAGTCTCTTCTATAGAATAAATAACCTTTCCTTCTCCCATATTTCCTGTCTGGAGTaGTTCACTGATGGCCTACCA | + |
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Preference number: 4 (lower is better) Translates to: ILIVRSLFYRINNLSFSHISCLE*FTDGLP Trigger: TGGTAGGCCATCAGTGAATCACTCCAGACAGGAAAT...ATGGGAGAAGGAAAGGTTATTTATTCTATAGAAGAGACTGCGGACAATTAGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR GCA 90 bp | ATACTAATTGTCCGCAGTCTCTTCTATAGAATAAATAACCTTTCCTTCTCCCATGAAGTAAGGCCTTCATaGCCCAATGAACCCTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: ILIVRSLFYRINNLSFSHEVRPS*PNEPCD Trigger: ATCACAGGGTTCATTGGGGCATGAAGGCCTTACTTC...ATGGGAGAAGGAAAGGTTATTTATTCTATAGAAGAGACTGCGGACAATTAGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR GCA 90 bp | ATACTAATTGTCCGCAGTCTCTTCTATAGAATAAATAACCTTTCCTTCTCCCATGTGATCCCATTACACTaGAACCTATGTCTTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: ILIVRSLFYRINNLSFSHVIPLH*NLCLPG Trigger: GCCTGGAAGACATAGGTTGCAGTGTAATGGGATCAC...ATGGGAGAAGGAAAGGTTATTTATTCTATAGAAGAGACTGCGGACAATTAGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR TCA 90 bp | CTGAACCTGTGTGTCTTGATACATTCTTGTCTTCTAATGCTATGCATGTTTCGTCATTCATCATCAAAATaGCTTCCACCTCCGTTTAAT | + |
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Preference number: 4 (lower is better) Translates to: LNLCVLIHSCLLMLCMFRHSSSK*LPPPFN Trigger: ATTAAACGGAGGTGGAAGTCATTTTGATGATGAATG...ACGAAACATGCATAGCATTAGAAGACAAGAATGTATCAAGACACACAGGTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR CCA 90 bp | ATACTAATTGTCCGCAGTCTCTTCTATAGAATAAATAACCTTTCCTTCTCCCATATTGAGATACATGTTTaGAGCTGTGAGAATTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: ILIVRSLFYRINNLSFSHIEIHV*SCENLV Trigger: CACCAAATTCTCACAGCTCCAAACATGTATCTCAAT...ATGGGAGAAGGAAAGGTTATTTATTCTATAGAAGAGACTGCGGACAATTAGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR CAA 90 bp | CTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGCTTCCCGAGTAGCTGGGACTCCAGCTGCATTCTTTaGCAAAGCCCTCTTCATTGG | + |
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Preference number: 5 (lower is better) Translates to: LCLPGSSSLSTSFPSSWDSSCIL*QSPLHW Trigger: CCAATGAAGAGGGCTTTGCAAAAGAATGCAGCTGGA...GTCCCAGCTACTCGGGAAGCTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR CAA 90 bp | CTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGCTTCCCGAGTAGCTGGGACGCAAAGCCCTCTTCATaGGCCACACTATTTACAAGA | + |
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Preference number: 5 (lower is better) Translates to: LCLPGSSSLSTSFPSSWDAKPSS*ATLFTR Trigger: TCTTGTAAATAGTGTGGCCAATGAAGAGGGCTTTGC...GTCCCAGCTACTCGGGAAGCTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR CAA 90 bp | CTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGCTTCCCGAGTAGCTGGGACATAGGGGGATCTCTGTaGCTGGTAACCCAAGATATA | + |
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Preference number: 5 (lower is better) Translates to: LCLPGSSSLSTSFPSSWDIGGSL*LVTQDI Trigger: TATATCTTGGGTTACCAGCAACAGAGATCCCCCTAT...GTCCCAGCTACTCGGGAAGCTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR CAA 90 bp | CTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGCTTCCCGAGTAGCTGGGACCCCGTTTCTCATCATTaGATAATACCTCGTATGCCT | + |
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Preference number: 5 (lower is better) Translates to: LCLPGSSSLSTSFPSSWDPVSHH*IIPRMP Trigger: AGGCATACGAGGTATTATCAAATGATGAGAAACGGG...GTCCCAGCTACTCGGGAAGCTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR CAA 90 bp | AAGCTGGAGTGCAGTGGCGTGATCCCATTACACTGCAACCTATGTCTTCCAGGCGTCCACGAAAGTATATaGAGATACATGTTTGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: KLECSGVIPLHCNLCLPGVHESI*RYMFGA Trigger: AGCTCCAAACATGTATCTCAATATACTTTCGTGGAC...GCCTGGAAGACATAGGTTGCAGTGTAATGGGATCACGCCACTGCACTCCAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR CAA 90 bp | CTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGCTTCCCGAGTAGCTGGGACCTGAACCTGTGTGTCTaGATACATTCTTGTCTTCTA | + |
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Preference number: 5 (lower is better) Translates to: LCLPGSSSLSTSFPSSWDLNLCV*IHSCLL Trigger: TAGAAGACAAGAATGTATCAAGACACACAGGTTCAG...GTCCCAGCTACTCGGGAAGCTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR CAA 90 bp | CTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGCTTCCCGAGTAGCTGGGACCTGCCATTAACGATTTaGTCTGAAGTTGTAACAGAT | + |
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Preference number: 5 (lower is better) Translates to: LCLPGSSSLSTSFPSSWDLPLTI*SEVVTD Trigger: ATCTGTTACAACTTCAGACAAAATCGTTAATGGCAG...GTCCCAGCTACTCGGGAAGCTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR CAA 90 bp | GATCCCATTACACTGCAACCTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGCTCTTACCACCCTCTTaGACTCCTGCTGAGAAAATA | + |
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Preference number: 5 (lower is better) Translates to: DPITLQPMSSRLKQSFYQLLPPS*TPAEKI Trigger: TATTTTCTCAGCAGGAGTCAAAGAGGGTGGTAAGAG...CTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAGGTTGCAGTGTAATGGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR CAA 90 bp | GATCCCATTACACTGCAACCTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGAATGCTGTTCCTCCATaGGAAAACAGCCATTTCATG | + |
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Preference number: 5 (lower is better) Translates to: DPITLQPMSSRLKQSFYQNAVPP*ENSHFM Trigger: CATGAAATGGCTGTTTTCCAATGGAGGAACAGCATT...CTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAGGTTGCAGTGTAATGGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR CAA 90 bp | CTGAACCTGTGTGTCTTGATACATTCTTGTCTTCTAATGCTATGCATGTTTCGTTGGGTGTGCTGGGTATaGAGAACCGTGGTTTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: LNLCVLIHSCLLMLCMFRWVCWV*RTVVSS Trigger: TGAGGAAACCACGGTTCTCAATACCCAGCACACCCA...ACGAAACATGCATAGCATTAGAAGACAAGAATGTATCAAGACACACAGGTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS-3UTR CAA 90 bp | GATCCCATTACACTGCAACCTATGTCTTCCAGGCTCAAGCAGTCTTTCTACCAGTTTGGTAGACTTCTTTaGCACCTCTTTACGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: DPITLQPMSSRLKQSFYQFGRLL*HLFTLL Trigger: AAGAAGCGTAAAGAGGTGCAAAAGAAGTCTACCAAA...CTGGTAGAAAGACTGCTTGAGCCTGGAAGACATAGGTTGCAGTGTAATGGGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS TCA 90 bp | ATTGAGATACATGTTTGGAGCTGTGAGAATTTGGTGAATAGTTGTTaGATGACTGTGTTCTCCAGCTGCATTCTTTTGCAAAGCCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: IEIHVWSCENLVNSC*MTVFSSCILLQSPL Trigger: AAGAGGGCTTTGCAAAAGAATGCAGCTGGAGAACACAGTCATTCAACAACTATTCACCAAATTCTCACAGCTCCAAACATGTATCTCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS CAA 72 bp | GTTTTAACAGATAGTTGGAAGTGGGTGTGCTGGGTATaGAGAACCGTGGTTTCCTCAGCTCAGGCTCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VLTDSWKWVCWV*RTVVSSAQALL Trigger: CAGCAGAGCCTGAGCTGAGGAAACCACGGTTCTCAATACCCAGCACACCCACTTCCAACTATCTGTTAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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| CDS CAA 90 bp | TTACCACCCTCTTTGACTCCTGCTGAGAAAATAGGGGGATCTCTGTaGCTGGTAACCCAAGATATACCTCCCTCATCATTGTCCACGAAA | + |
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Preference number: 6 (lower is better) Translates to: LPPSLTPAEKIGGSL*LVTQDIPPSSLSTK Trigger: TTTCGTGGACAATGATGAGGGAGGTATATCTTGGGTTACCAGCAACAGAGATCCCCCTATTTTCTCAGCAGGAGTCAAAGAGGGTGGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307221.5 |
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