RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAJB12 (Homo sapiens)

Ensembl gene IDs: ENSG00000148719

Ensembl transcript IDs: ENST00000338820.7, ENST00000394903.6, ENST00000444643.7, ENST00000461919.5, ENST00000463786.2, ENST00000473051.1

Found 553 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGCACAGAGGCAGGCACAAATGGCCTCCAGGCAGAGTCAGCCATaGATCCAGGCCGGGAGGACACAGGCAAAGGAGGGGGTGGGCAGG +
Preference number: 1 (lower is better)
Translates to: AAQRQAQMASRQSQP*IQAGRTQAKEGVGR
Trigger: CCTGCCCACCCCCTCCTTTGCCTGTGTCCTCCCGGCCTGGATCCATGGCTGACTCTGCCTGGAGGCCATTTGTGCCTGCCTCTGTGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR GCA 90 bp CTGGCAAACGCTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTaGAGAAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTCC +
Preference number: 1 (lower is better)
Translates to: LANAGNRAQRPHSPG*RRREPATSNSHFPS
Trigger: GGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAGCGTTTGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 90 bp CGCGGCCCCTGCCGCCACCAAGACTGCCAGCTCCCACCCACCTCGTaGCTGCCTGTTCATCTTGCTCCATTTCCTCCTAGCTGGAGGGAT +
Preference number: 1 (lower is better)
Translates to: RGPCRHQDCQLPPTS*LPVHLAPFPPSWRD
Trigger: ATCCCTCCAGCTAGGAGGAAATGGAGCAAGATGAACAGGCAGCCACGAGGTGGGTGGGAGCTGGCAGTCTTGGTGGCGGCAGGGGCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 90 bp CACACTTCTCTGGGCTTGGCTGAAGTGGCCACCTCTGGCAAACGCTaGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTGCAGAAGGAG +
Preference number: 1 (lower is better)
Translates to: HTSLGLAEVATSGKR*EQSPAPPFAGLQKE
Trigger: CTCCTTCTGCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAGCGTTTGCCAGAGGTGGCCACTTCAGCCAAGCCCAGAGAAGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR TCA 90 bp CTCCACCCCTCCTGTGCTGAGCGGCTGCGTCTGACCCTGAACTCATaGCCTTCTGTTCCCTTCCTCAGACCGCAGGCGAGATGCCTGGGC +
Preference number: 1 (lower is better)
Translates to: LHPSCAERLRLTLNS*PSVPFLRPQARCLG
Trigger: GCCCAGGCATCTCGCCTGCGGTCTGAGGAAGGGAACAGAAGGTCATGAGTTCAGGGTCAGACGCAGCCGCTCAGCACAGGAGGGGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR GCA 90 bp GCCCCTGCCGCCACCAAGACTGCCAGCTCCCACCCACCTCGTGGCTaGCTGTTCATCTTGCTCCATTTCCTCCTAGCTGGAGGGATGGAG +
Preference number: 1 (lower is better)
Translates to: APAATKTASSHPPRG*LFILLHFLLAGGME
Trigger: CTCCATCCCTCCAGCTAGGAGGAAATGGAGCAAGATGAACAGGCAGCCACGAGGTGGGTGGGAGCTGGCAGTCTTGGTGGCGGCAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 90 bp GTCAGCCATGGATCCAGGCCGGGAGGACACAGGCAAAGGAGGGGGTaGGCAGGGCACCCACACAGAGAAGAACCTTCACTGCTTCTGCCC +
Preference number: 1 (lower is better)
Translates to: VSHGSRPGGHRQRRG*AGHPHREEPSLLLP
Trigger: GGGCAGAAGCAGTGAAGGTTCTTCTCTGTGTGGGTGCCCTGCCCACCCCCTCCTTTGCCTGTGTCCTCCCGGCCTGGATCCATGGCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR TCA 90 bp GGCACGGACAATAGTCTGCTGTGCTGGAGAAAGGGCCGTGCTGACTaGTGGCTGGAGTGGACCAAGAAGCCCCGGGTGGCCCTCAGCAAC +
Preference number: 1 (lower is better)
Translates to: GTDNSLLCWRKGRAD*WLEWTKKPRVALSN
Trigger: GTTGCTGAGGGCCACCCGGGGCTTCTTGGTCCACTCCAGCCATCAGTCAGCACGGCCCTTTCTCCAGCACAGCAGACTATTGTCCGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 90 bp ACTCATGACCTTCTGTTCCCTTCCTCAGACCGCAGGCGAGATGCCTaGGCAAGGCCGGATGCCTGTGGCTTCCAGGCTGCCAGGTGTGAC +
Preference number: 1 (lower is better)
Translates to: THDLLFPSSDRRRDA*ARPDACGFQAARCD
Trigger: GTCACACCTGGCAGCCTGGAAGCCACAGGCATCCGGCCTTGCCCAGGCATCTCGCCTGCGGTCTGAGGAAGGGAACAGAAGGTCATGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 90 bp AGGGCCGTGCTGACTGATGGCTGGAGTGGACCAAGAAGCCCCGGGTaGCCCTCAGCAACAGTTTCAAGTTCCCACTCTGCCTGGTTCTGG +
Preference number: 1 (lower is better)
Translates to: RAVLTDGWSGPRSPG*PSATVSSSHSAWFW
Trigger: CCAGAACCAGGCAGAGTGGGAACTTGAAACTGTTGCTGAGGGCCACCCGGGGCTTCTTGGTCCACTCCAGCCATCAGTCAGCACGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 90 bp GCGCTGCTGAGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTTGTaGGGCCTCTACTGTGACTCAATACTGACCTGGCACCTGCCTCCA +
Preference number: 1 (lower is better)
Translates to: ALLRGERWSHPSRSL*GLYCDSILTWHLPP
Trigger: TGGAGGCAGGTGCCAGGTCAGTATTGAGTCACAGTAGAGGCCCCACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAGCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR GCA 90 bp TTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATaGGGAGCCTCCGCCAGCCCTGCGAGGGAGGGAAGCAGCCCCATG +
Preference number: 1 (lower is better)
Translates to: FYFRCHGFCILGERR*GASASPAREGSSPM
Trigger: CATGGGGCTGCTTCCCTCCCTCGCAGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
ENST00000461919.5
3UTR CCA 90 bp GGGTGGTTATCACCTCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTTaGAAGACGGCGGGCGCAATGACACACCCACCGCCACAGGAAAAC +
Preference number: 1 (lower is better)
Translates to: GWLSPPGWQLGEVRL*KTAGAMTHPPPQEN
Trigger: GTTTTCCTGTGGCGGTGGGTGTGTCATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGAGGTGATAACCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR CCA 90 bp CCCACCTCGTGGCTGCCTGTTCATCTTGCTCCATTTCCTCCTAGCTaGAGGGATGGAGAAAGGGGAGGGCTCTTGGCCCACCTATTCCCA +
Preference number: 1 (lower is better)
Translates to: PTSWLPVHLAPFPPS*RDGERGGLLAHLFP
Trigger: TGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTCTCCATCCCTCCAGCTAGGAGGAAATGGAGCAAGATGAACAGGCAGCCACGAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 90 bp GAGAGAAACTCTGGGAGGGTGGTTATCACCTCCTGGCTGGCAGCTTaGGGAAGTAAGGCTTTGGAAGACGGCGGGCGCAATGACACACCC +
Preference number: 1 (lower is better)
Translates to: ERNSGRVVITSWLAA*GSKALEDGGRNDTP
Trigger: GGGTGTGTCATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGAGGTGATAACCACCCTCCCAGAGTTTCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR TCA 90 bp AGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTaGGCGGCTGCGTCTGACCCTGAACTCATGACCTTCTGTTCCCTT +
Preference number: 1 (lower is better)
Translates to: SLLPATLISPPPLLC*AAASDPELMTFCSL
Trigger: AAGGGAACAGAAGGTCATGAGTTCAGGGTCAGACGCAGCCGCTCAGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 90 bp ACAATAGTCTGCTGTGCTGGAGAAAGGGCCGTGCTGACTGATGGCTaGAGTGGACCAAGAAGCCCCGGGTGGCCCTCAGCAACAGTTTCA +
Preference number: 1 (lower is better)
Translates to: TIVCCAGERAVLTDG*SGPRSPGWPSATVS
Trigger: TGAAACTGTTGCTGAGGGCCACCCGGGGCTTCTTGGTCCACTCCAGCCATCAGTCAGCACGGCCCTTTCTCCAGCACAGCAGACTATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 90 bp GAGGGATGGAGAAAGGGGAGGGCTCTTGGCCCACCTATTCCCACATaGTTCTTCCTGGTATCAGGCAGGCAGTGTGCATATGGGGCTCTC +
Preference number: 1 (lower is better)
Translates to: EGWRKGRALGPPIPT*FFLVSGRQCAYGAL
Trigger: GAGAGCCCCATATGCACACTGCCTGCCTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTCTCCATCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 90 bp CACAGAGAAGAACCTTCACTGCTTCTGCCCACACTTCTCTGGGCTTaGCTGAAGTGGCCACCTCTGGCAAACGCTGGGAACAGAGCCCAG +
Preference number: 1 (lower is better)
Translates to: HREEPSLLLPTLLWA*LKWPPLANAGNRAQ
Trigger: CTGGGCTCTGTTCCCAGCGTTTGCCAGAGGTGGCCACTTCAGCCAAGCCCAGAGAAGTGTGGGCAGAAGCAGTGAAGGTTCTTCTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 90 bp TGGGGCCTCTACTGTGACTCAATACTGACCTGGCACCTGCCTCCATaGCCTGCTCCTCTCCAGGTTAACCATAATCCTGAGGCCTTCGCG +
Preference number: 1 (lower is better)
Translates to: WGLYCDSILTWHLPP*PAPLQVNHNPEAFA
Trigger: CGCGAAGGCCTCAGGATTATGGTTAACCTGGAGAGGAGCAGGCCATGGAGGCAGGTGCCAGGTCAGTATTGAGTCACAGTAGAGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR CCA 90 bp AAAGAGCCGAGAGAAACTCTGGGAGGGTGGTTATCACCTCCTGGCTaGCAGCTTGGGGAAGTAAGGCTTTGGAAGACGGCGGGCGCAATG +
Preference number: 1 (lower is better)
Translates to: KEPRETLGGWLSPPG*QLGEVRLWKTAGAM
Trigger: CATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGAGGTGATAACCACCCTCCCAGAGTTTCTCTCGGCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR TCA 90 bp AGGCAGGCAGTGTGCATATGGGGCTCTCTTGGGCCCCACCATATGTaGTGGCCTAAATACCAGGGCACGGACAATAGTCTGCTGTGCTGG +
Preference number: 1 (lower is better)
Translates to: RQAVCIWGSLGPHHM*WPKYQGTDNSLLCW
Trigger: CCAGCACAGCAGACTATTGTCCGTGCCCTGGTATTTAGGCCATCACATATGGTGGGGCCCAAGAGAGCCCCATATGCACACTGCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR GCA 90 bp GGAAGCAGCCCCATGGCAGGTTTTCTGTCTGTCCTAAGAGCTTTCTaGATTTACTGGGTGAGAGAGAGGGCAGCTGTGCAGCGTTCGGCC +
Preference number: 1 (lower is better)
Translates to: GSSPMAGFLSVLRAF*IYWVRERAAVQRSA
Trigger: GGCCGAACGCTGCACAGCTGCCCTCTCTCTCACCCAGTAAATGCAGAAAGCTCTTAGGACAGACAGAAAACCTGCCATGGGGCTGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
ENST00000461919.5
3UTR CCA 90 bp CACCCACACAGAGAAGAACCTTCACTGCTTCTGCCCACACTTCTCTaGGCTTGGCTGAAGTGGCCACCTCTGGCAAACGCTGGGAACAGA +
Preference number: 1 (lower is better)
Translates to: HPHREEPSLLLPTLL*AWLKWPPLANAGNR
Trigger: TCTGTTCCCAGCGTTTGCCAGAGGTGGCCACTTCAGCCAAGCCCAGAGAAGTGTGGGCAGAAGCAGTGAAGGTTCTTCTCTGTGTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 90 bp ATTCTGGTTCAGGTGTATCCTTTGTCCAAGGTACGAGAGGAGGCCTaGCGGTCACATCAACAGCGAGTGAAGACAGAGGCAGCCACGGGC +
Preference number: 1 (lower is better)
Translates to: ILVQVYPLSKVREEA*RSHQQRVKTEAATG
Trigger: GCCCGTGGCTGCCTCTGTCTTCACTCGCTGTTGATGTGACCGCCAGGCCTCCTCTCGTACCTTGGACAAAGGATACACCTGAACCAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR GCA 90 bp CCCACCATATGTGATGGCCTAAATACCAGGGCACGGACAATAGTCTaGTGTGCTGGAGAAAGGGCCGTGCTGACTGATGGCTGGAGTGGA +
Preference number: 1 (lower is better)
Translates to: PTICDGLNTRARTIV*CAGERAVLTDGWSG
Trigger: TCCACTCCAGCCATCAGTCAGCACGGCCCTTTCTCCAGCACAGCAGACTATTGTCCGTGCCCTGGTATTTAGGCCATCACATATGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 90 bp CCCATGGCAGGTTTTCTGTCTGTCCTAAGAGCTTTCTGCATTTACTaGGTGAGAGAGAGGGCAGCTGTGCAGCGTTCGGCCTCCAATTCC +
Preference number: 1 (lower is better)
Translates to: PMAGFLSVLRAFCIY*VRERAAVQRSASNS
Trigger: GGAATTGGAGGCCGAACGCTGCACAGCTGCCCTCTCTCTCACCCAGTAAATGCAGAAAGCTCTTAGGACAGACAGAAAACCTGCCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
ENST00000461919.5
3UTR CCA 90 bp CCCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATaGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTCCGCCAG +
Preference number: 1 (lower is better)
Translates to: PTDICCEFYILLSLP*FLYPRREAMRSLRQ
Trigger: CTGGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
ENST00000461919.5
3UTR GCA 90 bp CCCTTCCCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTaGCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTCC +
Preference number: 1 (lower is better)
Translates to: PFPLISAASFTFYFR*HGFCILGERRCGAS
Trigger: GGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
ENST00000461919.5
3UTR CCA 90 bp AGGCACTCTGGCCACATCAGTTCTTATAATCTCTCTGGGCTGAAGTaGCTGCTTCATTGCAGGGTTGGACCTTGTTTAAAAACCAGATTT +
Preference number: 1 (lower is better)
Translates to: RHSGHISSYNLSGLK*LLHCRVGPCLKTRF
Trigger: AAATCTGGTTTTTAAACAAGGTCCAACCCTGCAATGAAGCAGCCACTTCAGCCCAGAGAGATTATAAGAACTGATGTGGCCAGAGTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR CCA 90 bp TTTAAGCAAAATCCTCATTTCAATGTGAGGGTAAGAAAACTATTCTaGTTCAGGTGTATCCTTTGTCCAAGGTACGAGAGGAGGCCTGGC +
Preference number: 1 (lower is better)
Translates to: FKQNPHFNVRVRKLF*FRCILCPRYERRPG
Trigger: GCCAGGCCTCCTCTCGTACCTTGGACAAAGGATACACCTGAACCAGAATAGTTTTCTTACCCTCACATTGAAATGAGGATTTTGCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR TCA 90 bp GTGGCTGCTTCATTGCAGGGTTGGACCTTGTTTAAAAACCAGATTTaGCATTTCCTTACCGAACTTCCTTTCCCAGCAAGAATCCTATTT +
Preference number: 1 (lower is better)
Translates to: VAASLQGWTLFKNQI*HFLTELPFPARILF
Trigger: AAATAGGATTCTTGCTGGGAAAGGAAGTTCGGTAAGGAAATGTCAAATCTGGTTTTTAAACAAGGTCCAACCCTGCAATGAAGCAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR TCA 90 bp CCACCTCTGGCAAACGCTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTGCCCAGGCTGCCAGGTGTaGCGGCATTCGAGAGAGTGC +
Preference number: 2 (lower is better)
Translates to: PPLANAGNRAQRPHSPGCPGCQV*RHSREC
Trigger: GCACTCTCTCGAATGCCGTCACACCTGGCAGCCTGG...GCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAGCGTTTGCCAGAGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp CTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTGCAGAAGGAGGGAGCCTGGGGTGGAGGCAGCCCTaGCTCATACTTGGACCTCGG +
Preference number: 2 (lower is better)
Translates to: LGTEPSAPIRRAAEGGSLGWRQP*LILGPR
Trigger: CCGAGGTCCAAGTATGAGCCAGGGCTGCCTCCACCC...CAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp GGCCGGATGCCTGTGGCTTCCAGGCTGCCAGGTGTGACGGCATTCGAGAGAGTGGGTCCCCCACACCCCTaGAGCCAGGGAGCAGAGCGG +
Preference number: 2 (lower is better)
Translates to: GRMPVASRLPGVTAFERVGPPHP*SQGAER
Trigger: CCGCTCTGCTCCCTGGCTCCAGGGGTGTGGGGGACC...CACTCTCTCGAATGCCGTCACACCTGGCAGCCTGGAAGCCACAGGCATCCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR TCA 90 bp CCACCTCTGGCAAACGCTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTGCGGGCCCCACCATATGTaGTGGCCTAAATACCAGGGC +
Preference number: 2 (lower is better)
Translates to: PPLANAGNRAQRPHSPGCGPHHM*WPKYQG
Trigger: GCCCTGGTATTTAGGCCATCACATATGGTGGGGCCC...GCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAGCGTTTGCCAGAGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR TCA 90 bp ATCACCTCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTTGGAAGACGGCGGGCGCTGGTGGTGGCTCCTGTaGGGGAGGAAAGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: ITSWLAAWGSKALEDGGRWWWLL*GRKGSW
Trigger: CCAGCTGCCTTTCCTCCCTCACAGGAGCCACCACCA...GCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGAGGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR GCA 90 bp CCACCTCTGGCAAACGCTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTGCGACAATAGTCTGCTGTaGTGGAGAAAGGGCCGTGCT +
Preference number: 2 (lower is better)
Translates to: PPLANAGNRAQRPHSPGCDNSLL*WRKGRA
Trigger: AGCACGGCCCTTTCTCCAGCACAGCAGACTATTGTC...GCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAGCGTTTGCCAGAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp GAAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCCGCAGGCGAGATGCCTaGGCAAGGCCGGATGCCTGT +
Preference number: 2 (lower is better)
Translates to: EGGSLLPATLISPPPLLCRRRDA*ARPDAC
Trigger: ACAGGCATCCGGCCTTGCCCAGGCATCTCGCCTGCG...GCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR TCA 90 bp GGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTGAGCGGGAGAAAGGGCCGTGCTaGCTGATGGCTGGAGTGGAC +
Preference number: 2 (lower is better)
Translates to: GACYQQLSFPLHPSCAEREKGPC*LMAGVD
Trigger: GTCCACTCCAGCCATCAGTCAGCACGGCCCTTTCTC...CCGCTCAGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR TCA 90 bp TCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTTGGAAGACGGCGGGCGCAATGACCCAGGCTGCCAGGTGTaGCGGCATTCGAGAGAGTGC +
Preference number: 2 (lower is better)
Translates to: SWLAAWGSKALEDGGRNDPGCQV*RHSREC
Trigger: GCACTCTCTCGAATGCCGTCACACCTGGCAGCCTGG...GTCATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR GCA 90 bp TATCCTTTGTCCAAGGTACGAGAGGAGGCCTGGCGGTCACATCAACAGCGAGTGTGCACCGCTGCACCGTaGTGCCCGCTCGACCCCCAC +
Preference number: 2 (lower is better)
Translates to: YPLSKVREEAWRSHQQRVCTAAP*CPLDPH
Trigger: GTGGGGGTCGAGCGGGCAGCACGGTGCAGCGGTGCA...CACTCGCTGTTGATGTGACCGCCAGGCCTCCTCTCGTACCTTGGACAAAGGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR CCA 90 bp GGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTGAGCGGGGCTGGAGGTCAGGCTaGGGACAGGAGTCTTTGCCA +
Preference number: 2 (lower is better)
Translates to: GACYQQLSFPLHPSCAERGWRSG*GQESLP
Trigger: TGGCAAAGACTCCTGTCCCCAGCCTGACCTCCAGCC...CCGCTCAGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp TATCAGGCAGGCAGTGTGCATATGGGGCTCTCTTGGGCCCCACCATATGTGATGGGTCCCCCACACCCCTaGAGCCAGGGAGCAGAGCGG +
Preference number: 2 (lower is better)
Translates to: YQAGSVHMGLSWAPPYVMGPPHP*SQGAER
Trigger: CCGCTCTGCTCCCTGGCTCCAGGGGTGTGGGGGACC...CATCACATATGGTGGGGCCCAAGAGAGCCCCATATGCACACTGCCTGCCTGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp ATTCGCCGGGCTGCAGAAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTCACTCTGCCTGGTTCTaGGGTCCCCCACACCCCTGG +
Preference number: 2 (lower is better)
Translates to: IRRAAEGGSLLPATLISPHSAWF*GPPHPW
Trigger: CCAGGGGTGTGGGGGACCCCAGAACCAGGCAGAGTG...AGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CAA 90 bp CCAGCGCTGCTGAGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTaGTGGGGCCTCTACTGTGACTCAATACTGACCTGGCACCTGCCT +
Preference number: 2 (lower is better)
Translates to: PALLRGERWSHPSRS*WGLYCDSILTWHLP
Trigger: AGGCAGGTGCCAGGTCAGTATTGAGTCACAGTAGAGGCCCCACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAGCAGCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR GCA 90 bp CCCACCAGCGCTGCTGAGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTTGTGGGGGACAGGAGTCTTTaGCACAATCACCAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: PTSAAERGEVVSPKQVLVGDRSL*HNHQAS
Trigger: GGAAGCCTGGTGATTGTGGCAAAGACTCCTGTCCCC...CACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAGCAGCGCTGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR GCA 90 bp GGCCGGATGCCTGTGGCTTCCAGGCTGCCAGGTGTGACGGCATTCGAGAGAGTGCACCCACCTCGTGGCTaGCTGTTCATCTTGCTCCAT +
Preference number: 2 (lower is better)
Translates to: GRMPVASRLPGVTAFERVHPPRG*LFILLH
Trigger: ATGGAGCAAGATGAACAGGCAGCCACGAGGTGGGTG...CACTCTCTCGAATGCCGTCACACCTGGCAGCCTGGAAGCCACAGGCATCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR GCA 90 bp GGGCACCCACACAGAGAAGAACCTTCACTGCTTCTGCCCACACTTCTCTGGGCTTGCCGCCACCAAGACTaGCAGCTCCCACCCACCTCG +
Preference number: 2 (lower is better)
Translates to: GHPHREEPSLLLPTLLWACRHQD*QLPPTS
Trigger: CGAGGTGGGTGGGAGCTGGCAGTCTTGGTGGCGGCA...AGCCCAGAGAAGTGTGGGCAGAAGCAGTGAAGGTTCTTCTCTGTGTGGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp GTGGACCAAGAAGCCCCGGGTGGCCCTCAGCAACAGTTTCAAGTTCCCACTCTGCAGCTGCTCGGTCTCTaGAGGCTGGAGGTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: VDQEAPGGPQQQFQVPTLQLLGL*RLEVRL
Trigger: CAGCCTGACCTCCAGCCTCCAGAGACCGAGCAGCTG...CAGAGTGGGAACTTGAAACTGTTGCTGAGGGCCACCCGGGGCTTCTTGGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp GAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGGCAGGCACACTCTGCCTGGTTCTaGGGTCCCCCACACCCCTGG +
Preference number: 2 (lower is better)
Translates to: EGSWPTYSHMVLPGIRQAHSAWF*GPPHPW
Trigger: CCAGGGGTGTGGGGGACCCCAGAACCAGGCAGAGTG...TGCCTGCCTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp CTGGGCACCAGGACAAAGAGCCCACCAGCGCTGCTGAGAGGGGAGAGGTGGTCTAAAGGGGAGGGCTCTTaGCCCACCTATTCCCACATG +
Preference number: 2 (lower is better)
Translates to: LGTRTKSPPALLRGERWSKGEGS*PTYSHM
Trigger: CATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTT...AGACCACCTCTCCCCTCTCAGCAGCGCTGGTGGGCTCTTTGTCCTGGTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR TCA 90 bp AAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTAAGGGCCGTGCTGACTaGTGGCTGGAGTGGACCAAG +
Preference number: 2 (lower is better)
Translates to: KEGACYQQLSFPLHPSCAKGRAD*WLEWTK
Trigger: CTTGGTCCACTCCAGCCATCAGTCAGCACGGCCCTT...AGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp GAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGGCAGGCAGGGTGGAGGCAGCCCTaGCTCATACTTGGACCTCGG +
Preference number: 2 (lower is better)
Translates to: EGSWPTYSHMVLPGIRQAGWRQP*LILGPR
Trigger: CCGAGGTCCAAGTATGAGCCAGGGCTGCCTCCACCC...TGCCTGCCTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp GGGATGGAGAAAGGGGAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGCGGAAACCGACCTTaGTTTCCCAGCAGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: GMEKGEGSWPTYSHMVLPGGNRP*FPSRPH
Trigger: GTGGGGCCTGCTGGGAAACCAAGGTCGGTTTCCGCC...AGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTCTCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp TGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTGAGCGGCTGCGTCCAAGAAGCCCCGGGTaGCCCTCAGCAACAGTTTCA +
Preference number: 2 (lower is better)
Translates to: CYQQLSFPLHPSCAERLRPRSPG*PSATVS
Trigger: TGAAACTGTTGCTGAGGGCCACCCGGGGCTTCTTGG...ACGCAGCCGCTCAGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp CCCACCAGCGCTGCTGAGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTTGTGCATATGGGGCTCTCTTaGGCCCCACCATATGTGATG +
Preference number: 2 (lower is better)
Translates to: PTSAAERGEVVSPKQVLVHMGLS*APPYVM
Trigger: CATCACATATGGTGGGGCCCAAGAGAGCCCCATATG...CACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAGCAGCGCTGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR CCA 90 bp ATTCGCCGGGCTGCAGAAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTCAGGCAGTGTGCATATaGGGCTCTCTTGGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: IRRAAEGGSLLPATLISPQAVCI*GSLGPH
Trigger: GTGGGGCCCAAGAGAGCCCCATATGCACACTGCCTG...AGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp AGTAAGGCTTTGGAAGACGGCGGGCGCAATGACACACCCACCGCCACAGGAAAAACCTCTGGCAAACGCTaGGAACAGAGCCCAGCGCCC +
Preference number: 2 (lower is better)
Translates to: SKALEDGGRNDTPTATGKTSGKR*EQSPAP
Trigger: GGGCGCTGGGCTCTGTTCCCAGCGTTTGCCAGAGGT...TTTTCCTGTGGCGGTGGGTGTGTCATTGCGCCCGCCGTCTTCCAAAGCCTTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR CAA 90 bp AGGGTGGTTATCACCTCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTaGGAAGACGGCGGGCGCAATGACACACCCACCGCCACAGGAAAA +
Preference number: 2 (lower is better)
Translates to: RVVITSWLAAWGSKA*EDGGRNDTPTATGK
Trigger: TTTTCCTGTGGCGGTGGGTGTGTCATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGAGGTGATAACCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR TCA 90 bp ATTCGCCGGGCTGCAGAAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTGGGCCCCACCATATGTaGTGGCCTAAATACCAGGGC +
Preference number: 2 (lower is better)
Translates to: IRRAAEGGSLLPATLISPGPHHM*WPKYQG
Trigger: GCCCTGGTATTTAGGCCATCACATATGGTGGGGCCC...AGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR GCA 90 bp GAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGGCAGGCAGACCAGGGCCAAAGCTaGCAGGAGTTGCAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: EGSWPTYSHMVLPGIRQADQGQS*QELQGG
Trigger: TCCACCCTGCAACTCCTGGCAGCTTTGGCCCTGGTC...TGCCTGCCTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR GCA 90 bp TCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTTGGAAGACGGCGGGCGCAATGACCACCCACCTCGTGGCTaGCTGTTCATCTTGCTCCAT +
Preference number: 2 (lower is better)
Translates to: SWLAAWGSKALEDGGRNDHPPRG*LFILLH
Trigger: ATGGAGCAAGATGAACAGGCAGCCACGAGGTGGGTG...GTCATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR GCA 90 bp GTGGCACCTATAAGGCAAAGCCCACTGAGGGACTTAGGGGTGGGGAAATGGTTACTAGGAGAGAGGCGATaGGGAGCCTCCGCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: VAPIRQSPLRDLGVGKWLLGERR*GASASP
Trigger: AGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAG...TAACCATTTCCCCACCCCTAAGTCCCTCAGTGGGCTTTGCCTTATAGGTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR CCA 90 bp GGGCACCCACACAGAGAAGAACCTTCACTGCTTCTGCCCACACTTCTCTGGGCTGCCCTGGCTCATACTTaGACCTCGGTGGTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: GHPHREEPSLLLPTLLWAALAHT*TSVVWL
Trigger: CAGCCACACCACCGAGGTCCAAGTATGAGCCAGGGC...AGCCCAGAGAAGTGTGGGCAGAAGCAGTGAAGGTTCTTCTCTGTGTGGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp GCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGGCAGGCAGTGTGGCGGAAACCGACCTTaGTTTCCCAGCAGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: ALGPPIPTWFFLVSGRQCGGNRP*FPSRPH
Trigger: GTGGGGCCTGCTGGGAAACCAAGGTCGGTTTCCGCC...ACACTGCCTGCCTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp AAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTGTGCTGACTGATGGCTaGAGTGGACCAAGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: KEGACYQQLSFPLHPSCAVLTDG*SGPRSP
Trigger: GGGGCTTCTTGGTCCACTCCAGCCATCAGTCAGCAC...AGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp ACTCATGACCTTCTGTTCCCTTCCTCAGACCGCAGGCGAGATGCCTGGGCAAGGGTGCTGACTGATGGCTaGAGTGGACCAAGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: THDLLFPSSDRRRDAWARVLTDG*SGPRSP
Trigger: GGGGCTTCTTGGTCCACTCCAGCCATCAGTCAGCAC...CCTTGCCCAGGCATCTCGCCTGCGGTCTGAGGAAGGGAACAGAAGGTCATGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp GGGCGTGGGGGCAGAGCACCGGGGCCACAGTGGGTAGGCACTCTGGCCACATCAGCTTCATTGCAGGGTTaGACCTTGTTTAAAAACCAG +
Preference number: 2 (lower is better)
Translates to: GRGGRAPGPQWVGTLATSASLQG*TLFKNQ
Trigger: CTGGTTTTTAAACAAGGTCCAACCCTGCAATGAAGC...TGATGTGGCCAGAGTGCCTACCCACTGTGGCCCCGGTGCTCTGCCCCCACGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR TCA 90 bp GCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGGCAGGCAGTGTGAGAAAGGGCCGTGCTaGCTGATGGCTGGAGTGGAC +
Preference number: 2 (lower is better)
Translates to: ALGPPIPTWFFLVSGRQCEKGPC*LMAGVD
Trigger: GTCCACTCCAGCCATCAGTCAGCACGGCCCTTTCTC...ACACTGCCTGCCTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR TCA 90 bp TCCTTGGTGCATGACTTAGGAAAAACCAGTGGCAATGATGGAGCTGTGCCCTGTCCACCCCTCCTGTGCTaGGCGGCTGCGTCTGACCCT +
Preference number: 2 (lower is better)
Translates to: SLVHDLGKTSGNDGAVPCPPLLC*AAASDP
Trigger: AGGGTCAGACGCAGCCGCTCAGCACAGGAGGGGTGG...ACAGGGCACAGCTCCATCATTGCCACTGGTTTTTCCTAAGTCATGCACCAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR TCA 90 bp GCTCCTCTCCAGGTTAACCATAATCCTGAGGCCTTCGCGGGTTCACACTATCATGCCTCTGGCTTCTCCTaGGAGGTGGCTGGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: APLQVNHNPEAFAGSHYHASGFS*EVAGGG
Trigger: GCCACCACCAGCCACCTCTCAGGAGAAGCCAGAGGC...ATGATAGTGTGAACCCGCGAAGGCCTCAGGATTATGGTTAACCTGGAGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR TCA 90 bp GGAAAAACCAGTGGCAATGATGGAGCTGTGCCCTGTGGCACCTATAAGGCAAAGGCCTCTGGCTTCTCCTaGGAGGTGGCTGGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: GKTSGNDGAVPCGTYKAKASGFS*EVAGGG
Trigger: GCCACCACCAGCCACCTCTCAGGAGAAGCCAGAGGC...CTTTGCCTTATAGGTGCCACAGGGCACAGCTCCATCATTGCCACTGGTTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR GCA 90 bp ACTCATGACCTTCTGTTCCCTTCCTCAGACCGCAGGCGAGATGCCTGGGCAAGGATCAGGCAGGCAGTGTaGATATGGGGCTCTCTTGGG +
Preference number: 2 (lower is better)
Translates to: THDLLFPSSDRRRDAWARIRQAV*IWGSLG
Trigger: CCCAAGAGAGCCCCATATGCACACTGCCTGCCTGAT...CCTTGCCCAGGCATCTCGCCTGCGGTCTGAGGAAGGGAACAGAAGGTCATGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp GAAAGGGGAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGAGTTCCCACTCTGCCTaGTTCTGGGGTCCCCCACAC +
Preference number: 2 (lower is better)
Translates to: ERGGLLAHLFPHGSSWYQSSHSA*FWGPPH
Trigger: GTGTGGGGGACCCCAGAACCAGGCAGAGTGGGAACT...CTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp TATCAGGCAGGCAGTGTGCATATGGGGCTCTCTTGGGCCCCACCATATGTGATGAGTTCCCACTCTGCCTaGTTCTGGGGTCCCCCACAC +
Preference number: 2 (lower is better)
Translates to: YQAGSVHMGLSWAPPYVMSSHSA*FWGPPH
Trigger: GTGTGGGGGACCCCAGAACCAGGCAGAGTGGGAACT...CATCACATATGGTGGGGCCCAAGAGAGCCCCATATGCACACTGCCTGCCTGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp GGCAATGATGGAGCTGTGCCCTGTGGCACCTATAAGGCAAAGCCCACTGAGGGATGGGCTTGGCTGAAGTaGCCACCTCTGGCAAACGCT +
Preference number: 2 (lower is better)
Translates to: GNDGAVPCGTYKAKPTEGWAWLK*PPLANA
Trigger: AGCGTTTGCCAGAGGTGGCCACTTCAGCCAAGCCCA...TCCCTCAGTGGGCTTTGCCTTATAGGTGCCACAGGGCACAGCTCCATCATTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR CCA 90 bp TATCCTTTGTCCAAGGTACGAGAGGAGGCCTGGCGGTCACATCAACAGCGAGTGAGGCAGAGTCAGCCATaGATCCAGGCCGGGAGGACA +
Preference number: 2 (lower is better)
Translates to: YPLSKVREEAWRSHQQRVRQSQP*IQAGRT
Trigger: TGTCCTCCCGGCCTGGATCCATGGCTGACTCTGCCT...CACTCGCTGTTGATGTGACCGCCAGGCCTCCTCTCGTACCTTGGACAAAGGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR GCA 90 bp ATTCGCCGGGCTGCAGAAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTGACAATAGTCTGCTGTaGTGGAGAAAGGGCCGTGCT +
Preference number: 2 (lower is better)
Translates to: IRRAAEGGSLLPATLISPDNSLL*WRKGRA
Trigger: AGCACGGCCCTTTCTCCAGCACAGCAGACTATTGTC...AGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR GCA 90 bp GGGGCTGTGAAAAGCTCTGATGCGACTCTCCTTATGCTGTCAGCTACAGCTAATTGCCGCCACCAAGACTaGCAGCTCCCACCCACCTCG +
Preference number: 2 (lower is better)
Translates to: GAVKSSDATLLMLSATANCRHQD*QLPPTS
Trigger: CGAGGTGGGTGGGAGCTGGCAGTCTTGGTGGCGGCA...ATTAGCTGTAGCTGACAGCATAAGGAGAGTCGCATCAGAGCTTTTCACAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR GCA 90 bp AAACTATTCTGGTTCAGGTGTATCCTTTGTCCAAGGTACGAGAGGAGGCCTGGCCCCCATTCGCCGGGCTaGAGAAGGAGGGAGCCTGCT +
Preference number: 2 (lower is better)
Translates to: KLFWFRCILCPRYERRPGPHSPG*RRREPA
Trigger: AGCAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGG...GCCAGGCCTCCTCTCGTACCTTGGACAAAGGATACACCTGAACCAGAATAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR CCA 90 bp GGGCACCCACACAGAGAAGAACCTTCACTGCTTCTGCCCACACTTCTCTGGGCTAAAGGGGAGGGCTCTTaGCCCACCTATTCCCACATG +
Preference number: 2 (lower is better)
Translates to: GHPHREEPSLLLPTLLWAKGEGS*PTYSHM
Trigger: CATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTT...AGCCCAGAGAAGTGTGGGCAGAAGCAGTGAAGGTTCTTCTCTGTGTGGGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CAA 90 bp TGGTTCTTCCTGGTATCAGGCAGGCAGTGTGCATATGGGGCTCTCTaGGGCCCCACCATATGTGATGGCCTAAATACCAGGGCACGGACA +
Preference number: 2 (lower is better)
Translates to: WFFLVSGRQCAYGAL*GPTICDGLNTRART
Trigger: TGTCCGTGCCCTGGTATTTAGGCCATCACATATGGTGGGGCCCAAGAGAGCCCCATATGCACACTGCCTGCCTGATACCAGGAAGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR GCA 90 bp GCATATGGGGCTCTCTTGGGCCCCACCATATGTGATGGCCTAAATACCAGGGCAGGGGACAGGAGTCTTTaGCACAATCACCAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: AYGALLGPTICDGLNTRAGDRSL*HNHQAS
Trigger: GGAAGCCTGGTGATTGTGGCAAAGACTCCTGTCCCC...TGCCCTGGTATTTAGGCCATCACATATGGTGGGGCCCAAGAGAGCCCCATATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp GGGGCTGTGAAAAGCTCTGATGCGACTCTCCTTATGCTGTCAGCTACAGCTAATCAGCTGCTCGGTCTCTaGAGGCTGGAGGTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: GAVKSSDATLLMLSATANQLLGL*RLEVRL
Trigger: CAGCCTGACCTCCAGCCTCCAGAGACCGAGCAGCTG...ATTAGCTGTAGCTGACAGCATAAGGAGAGTCGCATCAGAGCTTTTCACAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR CCA 90 bp ACTCATGACCTTCTGTTCCCTTCCTCAGACCGCAGGCGAGATGCCTGGGCAAGGCCACCTATTCCCACATaGTTCTTCCTGGTATCAGGC +
Preference number: 2 (lower is better)
Translates to: THDLLFPSSDRRRDAWARPPIPT*FFLVSG
Trigger: GCCTGATACCAGGAAGAACCATGTGGGAATAGGTGG...CCTTGCCCAGGCATCTCGCCTGCGGTCTGAGGAAGGGAACAGAAGGTCATGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp GCTTTGGAAGACGGCGGGCGCAATGACACACCCACCGCCACAGGAAAACATGGTAGGGATTTCATAGTCTaGGGAGGAGAGTGGCAACAG +
Preference number: 2 (lower is better)
Translates to: ALEDGGRNDTPTATGKHGRDFIV*GGEWQQ
Trigger: CTGTTGCCACTCTCCTCCCCAGACTATGAAATCCCT...ACCATGTTTTCCTGTGGCGGTGGGTGTGTCATTGCGCCCGCCGTCTTCCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR CCA 90 bp AAACTATTCTGGTTCAGGTGTATCCTTTGTCCAAGGTACGAGAGGAGGCCTGGCGCCCTGGCTCATACTTaGACCTCGGTGGTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: KLFWFRCILCPRYERRPGALAHT*TSVVWL
Trigger: CAGCCACACCACCGAGGTCCAAGTATGAGCCAGGGC...GCCAGGCCTCCTCTCGTACCTTGGACAAAGGATACACCTGAACCAGAATAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR CCA 90 bp GAAAGGGGAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGAATAGTCTGCTGTGCTaGAGAAAGGGCCGTGCTGAC +
Preference number: 2 (lower is better)
Translates to: ERGGLLAHLFPHGSSWYQNSLLC*RKGRAD
Trigger: GTCAGCACGGCCCTTTCTCCAGCACAGCAGACTATT...CTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CCA 90 bp CCCTGTGGCACCTATAAGGCAAAGCCCACTGAGGGACTTAGGGGTGGGGAAATGCCACCTATTCCCACATaGTTCTTCCTGGTATCAGGC +
Preference number: 2 (lower is better)
Translates to: PCGTYKAKPTEGLRGGEMPPIPT*FFLVSG
Trigger: GCCTGATACCAGGAAGAACCATGTGGGAATAGGTGG...CATTTCCCCACCCCTAAGTCCCTCAGTGGGCTTTGCCTTATAGGTGCCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR CCA 90 bp GGAAAAACCAGTGGCAATGATGGAGCTGTGCCCTGTGGCACCTATAAGGCAAAGCTGCCCACACTTCTCTaGGCTTGGCTGAAGTGGCCA +
Preference number: 2 (lower is better)
Translates to: GKTSGNDGAVPCGTYKAKLPTLL*AWLKWP
Trigger: TGGCCACTTCAGCCAAGCCCAGAGAAGTGTGGGCAG...CTTTGCCTTATAGGTGCCACAGGGCACAGCTCCATCATTGCCACTGGTTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR GCA 90 bp AATACAGCTTCCAGAGGATCCTTTAGGATCTATGTTCTTATTGCACATGGCTCACCCACCAACCCCACTTaGGGCCTGCCCTCCTGCGGC +
Preference number: 2 (lower is better)
Translates to: NTASRGSFRIYVLIAHGSPTNPT*GLPSCG
Trigger: GCCGCAGGAGGGCAGGCCGCAAGTGGGGTTGGTGGG...TGAGCCATGTGCAATAAGAACATAGATCCTAAAGGATCCTCTGGAAGCTGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR GCA 90 bp ATCACCTCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTTGGAAGACGGCGGGCGCCCCACTGATATCTGCTaGGAGTTTTACATTCTACTT +
Preference number: 2 (lower is better)
Translates to: ITSWLAAWGSKALEDGGRPTDIC*EFYILL
Trigger: AAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGG...GCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGAGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR CCA 90 bp GGAAAAACCAGTGGCAATGATGGAGCTGTGCCCTGTGGCACCTATAAGGCAAAGACACTTCTCTGGGCTTaGCTGAAGTGGCCACCTCTG +
Preference number: 2 (lower is better)
Translates to: GKTSGNDGAVPCGTYKAKTLLWA*LKWPPL
Trigger: CAGAGGTGGCCACTTCAGCCAAGCCCAGAGAAGTGT...CTTTGCCTTATAGGTGCCACAGGGCACAGCTCCATCATTGCCACTGGTTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR GCA 90 bp CTGACTCGGAGGAAGAACTTTCTGAAGTCCTTGGTGCATGACTTAGGAAAAACCGACCAGGGCCAAAGCTaGCAGGAGTTGCAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: LTRRKNFLKSLVHDLGKTDQGQS*QELQGG
Trigger: TCCACCCTGCAACTCCTGGCAGCTTTGGCCCTGGTC...GGTTTTTCCTAAGTCATGCACCAAGGACTTCAGAAAGTTCTTCCTCCGAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR GCA 90 bp TCCTTGGTGCATGACTTAGGAAAAACCAGTGGCAATGATGGAGCTGTGCCCTGTATCAGGCAGGCAGTGTaGATATGGGGCTCTCTTGGG +
Preference number: 2 (lower is better)
Translates to: SLVHDLGKTSGNDGAVPCIRQAV*IWGSLG
Trigger: CCCAAGAGAGCCCCATATGCACACTGCCTGCCTGAT...ACAGGGCACAGCTCCATCATTGCCACTGGTTTTTCCTAAGTCATGCACCAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR CAA 90 bp GCCCTTCCCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTaGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTC +
Preference number: 2 (lower is better)
Translates to: ALPTDICCEFYILLS*PWFLYPRREAMRSL
Trigger: GAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGGAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
ENST00000461919.5
3UTR-3UTR GCA 90 bp AATACAGCTTCCAGAGGATCCTTTAGGATCTATGTTCTTATTGCACATGGCTCAAGCAGGCCCCACAGCTaGTCGGTCTCTGGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: NTASRGSFRIYVLIAHGSSRPHS*SVSGGW
Trigger: CCAGCCTCCAGAGACCGAGCAGCTGTGGGGCCTGCT...TGAGCCATGTGCAATAAGAACATAGATCCTAAAGGATCCTCTGGAAGCTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR CCA 90 bp TCCTTTAGGATCTATGTTCTTATTGCACATGGCTCAGCCCGTCTAGGGACATCTAGAGGCAGGCACAAATaGCCTCCAGGCAGAGTCAGC +
Preference number: 2 (lower is better)
Translates to: SFRIYVLIAHGSARLGTSRGRHK*PPGRVS
Trigger: GCTGACTCTGCCTGGAGGCCATTTGTGCCTGCCTCT...AGATGTCCCTAGACGGGCTGAGCCATGTGCAATAAGAACATAGATCCTAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR TCA 90 bp CTGACTCGGAGGAAGAACTTTCTGAAGTCCTTGGTGCATGACTTAGGAAAAACCGTGGGGCCTCTACTGTaGCTCAATACTGACCTGGCA +
Preference number: 2 (lower is better)
Translates to: LTRRKNFLKSLVHDLGKTVGPLL*LNTDLA
Trigger: TGCCAGGTCAGTATTGAGTCACAGTAGAGGCCCCAC...GGTTTTTCCTAAGTCATGCACCAAGGACTTCAGAAAGTTCTTCCTCCGAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR GCA 90 bp GTGGCACCTATAAGGCAAAGCCCACTGAGGGACTTAGGGGTGGGGAAATGGTTAATGCGACTCTCCTTATaGTGTCAGCTACAGCTAATG +
Preference number: 2 (lower is better)
Translates to: VAPIRQSPLRDLGVGKWLMRLSL*CQLQLM
Trigger: CATTAGCTGTAGCTGACAGCATAAGGAGAGTCGCAT...TAACCATTTCCCCACCCCTAAGTCCCTCAGTGGGCTTTGCCTTATAGGTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR CCA 90 bp TCCTTTAGGATCTATGTTCTTATTGCACATGGCTCAGCCCGTCTAGGGACATCTAGGGAAGCAGCCCCATaGCAGGTTTTCTGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: SFRIYVLIAHGSARLGTSREAAP*QVFCLS
Trigger: GGACAGACAGAAAACCTGCCATGGGGCTGCTTCCCT...AGATGTCCCTAGACGGGCTGAGCCATGTGCAATAAGAACATAGATCCTAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR GCA 90 bp TGTTTAAAAACCAGATTTGACATTTCCTTACCGAACTTCCTTTCCCAGCAAGAATTGCCACTGCACCGCTaGACCGTGCTGCCCGCTCGA +
Preference number: 2 (lower is better)
Translates to: CLKTRFDISLPNFLSQQELPLHR*TVLPAR
Trigger: TCGAGCGGGCAGCACGGTGCAGCGGTGCAGTGGCAA...TTCTTGCTGGGAAAGGAAGTTCGGTAAGGAAATGTCAAATCTGGTTTTTAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR GCA 90 bp AAATCCTCATTTCAATGTGAGGGTAAGAAAACTATTCTGGTTCAGGTGTATCCTCTAGGAGAGAGGCGATaGGGAGCCTCCGCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: KSSFQCEGKKTILVQVYPLGERR*GASASP
Trigger: AGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAG...AGGATACACCTGAACCAGAATAGTTTTCTTACCCTCACATTGAAATGAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR CCA 90 bp CTCCCTCCTCCCACTGGCGGCAAGTGCTGTTTTAAGCAAAATCCTCATTTCAATAGGGATTTCATAGTTTaGACCTCGGTGGTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: LPPPTGGKCCFKQNPHFNRDFIV*TSVVWL
Trigger: CAGCCACACCACCGAGGTCCAAACTATGAAATCCCT...ATTGAAATGAGGATTTTGCTTAAAACAGCACTTGCCGCCAGTGGGAGGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394903.6
ENST00000444643.7
3UTR CAA 90 bp TTTCAATGTGAGGGTAAGAAAACTATTCTGGTTCAGGTGTATCCTTaGTCCAAGGTACGAGAGGAGGCCTGGCGGTCACATCAACAGCGA +
Preference number: 2 (lower is better)
Translates to: FQCEGKKTILVQVYP*SKVREEAWRSHQQR
Trigger: TCGCTGTTGATGTGACCGCCAGGCCTCCTCTCGTACCTTGGACAAAGGATACACCTGAACCAGAATAGTTTTCTTACCCTCACATTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR TCA 90 bp CTGACTCGGAGGAAGAACTTTCTGAAGTCCTTGGTGCATGACTTAGGAAAAACCGGCTGTGAAAAGCTCTaGTGCGACTCTCCTTATGCT +
Preference number: 2 (lower is better)
Translates to: LTRRKNFLKSLVHDLGKTGCEKL*CDSPYA
Trigger: AGCATAAGGAGAGTCGCATCAGAGCTTTTCACAGCC...GGTTTTTCCTAAGTCATGCACCAAGGACTTCAGAAAGTTCTTCCTCCGAGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR CCA 90 bp GCTCCTCTCCAGGTTAACCATAATCCTGAGGCCTTCGCGGGTTCACACTATCATCTACTTTCGTTGCCATaGTTTCTGTATCCTAGGAGA +
Preference number: 2 (lower is better)
Translates to: APLQVNHNPEAFAGSHYHLLSLP*FLYPRR
Trigger: TCTCCTAGGATACAGAAACCATGGCAACGAAAGTAG...ATGATAGTGTGAACCCGCGAAGGCCTCAGGATTATGGTTAACCTGGAGAGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR CCA 90 bp AAATCCTCATTTCAATGTGAGGGTAAGAAAACTATTCTGGTTCAGGTGTATCCTCTGAGAGGGGAGAGGTaGTCTCACCCAAGCAGGTCC +
Preference number: 2 (lower is better)
Translates to: KSSFQCEGKKTILVQVYPLRGER*SHPSRS
Trigger: GGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAG...AGGATACACCTGAACCAGAATAGTTTTCTTACCCTCACATTGAAATGAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR TCA 90 bp AAATCCTCATTTCAATGTGAGGGTAAGAAAACTATTCTGGTTCAGGTGTATCCTCCCGGCACCACTGACTaGCTCGGAGGAAGAACTTTC +
Preference number: 2 (lower is better)
Translates to: KSSFQCEGKKTILVQVYPPGTTD*LGGRTF
Trigger: GAAAGTTCTTCCTCCGAGTCAGTCAGTGGTGCCGGG...AGGATACACCTGAACCAGAATAGTTTTCTTACCCTCACATTGAAATGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR GCA 90 bp AAACTATTCTGGTTCAGGTGTATCCTTTGTCCAAGGTACGAGAGGAGGCCTGGCCCCACTGATATCTGCTaGGAGTTTTACATTCTACTT +
Preference number: 2 (lower is better)
Translates to: KLFWFRCILCPRYERRPGPTDIC*EFYILL
Trigger: AAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGG...GCCAGGCCTCCTCTCGTACCTTGGACAAAGGATACACCTGAACCAGAATAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR CCA 90 bp TCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAAGGGATTTCATAGTTTaGACCTCGGTGGTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: SAASFTFYFRCHGFCILGRDFIV*TSVVWL
Trigger: CAGCCACACCACCGAGGTCCAAACTATGAAATCCCT...TCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR CCA 90 bp CGCATCTATAAATTACATTCTATGGAGAGTTCTCTTTCTTCCTCCTATCTTTGGGTCTGGGGAGGAGAGTaGCAACAGTTAGCTCGGCAT +
Preference number: 2 (lower is better)
Translates to: RIYKLHSMESSLSSSYLWVWGGE*QQLARH
Trigger: ATGCCGAGCTAACTGTTGCCACTCTCCTCCCCAGAC...CCAAAGATAGGAGGAAGAAAGAGAACTCTCCATAGAATGTAATTTATAGATGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR CCA 90 bp TCCTTTAGGATCTATGTTCTTATTGCACATGGCTCAGCCCGTCTAGGGACATCTCTACTTTCGTTGCCATaGTTTCTGTATCCTAGGAGA +
Preference number: 2 (lower is better)
Translates to: SFRIYVLIAHGSARLGTSLLSLP*FLYPRR
Trigger: TCTCCTAGGATACAGAAACCATGGCAACGAAAGTAG...AGATGTCCCTAGACGGGCTGAGCCATGTGCAATAAGAACATAGATCCTAAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR CCA 90 bp CGCATCTATAAATTACATTCTATGGAGAGTTCTCTTTCTTCCTCCTATCTTTGGGCTTTCTGCATTTACTaGGTGAGAGAGAGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: RIYKLHSMESSLSSSYLWAFCIY*VRERAA
Trigger: AGCTGCCCTCTCTCTCACCCAGTAAATGCAGAAAGC...CCAAAGATAGGAGGAAGAAAGAGAACTCTCCATAGAATGTAATTTATAGATGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
ENST00000461919.5
3UTR-3UTR GCA 90 bp AATACAGCTTCCAGAGGATCCTTTAGGATCTATGTTCTTATTGCACATGGCTCACCCACTGATATCTGCTaGGAGTTTTACATTCTACTT +
Preference number: 2 (lower is better)
Translates to: NTASRGSFRIYVLIAHGSPTDIC*EFYILL
Trigger: AAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGG...TGAGCCATGTGCAATAAGAACATAGATCCTAAAGGATCCTCTGGAAGCTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR GCA 90 bp AAATCCTCATTTCAATGTGAGGGTAAGAAAACTATTCTGGTTCAGGTGTATCCTTATCATGATTACTGCTaGCATCAAAACCAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: KSSFQCEGKKTILVQVYPYHDYC*HQNQAG
Trigger: CCCAGCCTGGTTTTGATGGCAGCAGTAATCATGATA...AGGATACACCTGAACCAGAATAGTTTTCTTACCCTCACATTGAAATGAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR CAA 90 bp CTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTGCAGAAGGAGGGAGCCTGGGGCGGAAACCGACCTaGGTTTCCCAGCAGGCCCCA +
Preference number: 3 (lower is better)
Translates to: LGTEPSAPIRRAAEGGSLGRKPT*VSQQAP
Trigger: TGGGGCCTGCTGGGAAACCAAGGTCGGTTTCCGCCC...CAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 72 bp CTGGGCTTGGCTGAAGTGGCCACCTCTGGCAAACGCTaGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTG +
Preference number: 3 (lower is better)
Translates to: LGLAEVATSGKR*EQSPAPPFAGL
Trigger: CAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAGCGTTTGCCAGAGGTGGCCACTTCAGCCAAGCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR GCA 72 bp GCTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTaGAGAAGGAGGGAGCCTGCTACCAGCAACTCTCAT +
Preference number: 3 (lower is better)
Translates to: AGNRAQRPHSPG*RRREPATSNSH
Trigger: ATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 72 bp CTTCTGTTCCCTTCCTCAGACCGCAGGCGAGATGCCTaGGCAAGGCCGGATGCCTGTGGCTTCCAGGCTGCC +
Preference number: 3 (lower is better)
Translates to: LLFPSSDRRRDA*ARPDACGFQAA
Trigger: GGCAGCCTGGAAGCCACAGGCATCCGGCCTTGCCCAGGCATCTCGCCTGCGGTCTGAGGAAGGGAACAGAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CAA 90 bp CCACCTCTGGCAAACGCTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTGCTGGGGACAGGAGTCTTaGCCACAATCACCAGGCTTC +
Preference number: 3 (lower is better)
Translates to: PPLANAGNRAQRPHSPGCWGQES*PQSPGF
Trigger: GAAGCCTGGTGATTGTGGCAAAGACTCCTGTCCCCA...GCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAGCGTTTGCCAGAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CAA 90 bp GCTGCTGAGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTTGTGGGGCCTCTAGGGCGGAAACCGACCTaGGTTTCCCAGCAGGCCCCA +
Preference number: 3 (lower is better)
Translates to: AAERGEVVSPKQVLVGPLGRKPT*VSQQAP
Trigger: TGGGGCCTGCTGGGAAACCAAGGTCGGTTTCCGCCC...TAGAGGCCCCACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR CAA 90 bp AGCCCAGCGCCCCCATTCGCCGGGCTGCAGAAGGAGGGAGCCTGCTACCAGCAAGAAAGGGGAGGGCTCTaGGCCCACCTATTCCCACAT +
Preference number: 3 (lower is better)
Translates to: SPAPPFAGLQKEGACYQQERGGL*AHLFPH
Trigger: ATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTC...TTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGGGCGCTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR GCA 72 bp CGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATaGGGAGCCTCCGCCAGCCCTGCGAGGGAGGGAAGC +
Preference number: 3 (lower is better)
Translates to: RCHGFCILGERR*GASASPAREGS
Trigger: GCTTCCCTCCCTCGCAGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
ENST00000461919.5
3UTR CCA 72 bp GGGAGGACAGCATCGCTAGAGGGCGGAAACCGACCTTaGTTTCCCAGCAGGCCCCACAGCTGCTCGGTCTCT +
Preference number: 3 (lower is better)
Translates to: GRTASLEGGNRP*FPSRPHSCSVS
Trigger: AGAGACCGAGCAGCTGTGGGGCCTGCTGGGAAACCAAGGTCGGTTTCCGCCCTCTAGCGATGCTGTCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 72 bp TGCTGTGCTGGAGAAAGGGCCGTGCTGACTGATGGCTaGAGTGGACCAAGAAGCCCCGGGTGGCCCTCAGCA +
Preference number: 3 (lower is better)
Translates to: CCAGERAVLTDG*SGPRSPGWPSA
Trigger: TGCTGAGGGCCACCCGGGGCTTCTTGGTCCACTCCAGCCATCAGTCAGCACGGCCCTTTCTCCAGCACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 72 bp AGGCAGGCACAAATGGCCTCCAGGCAGAGTCAGCCATaGATCCAGGCCGGGAGGACACAGGCAAAGGAGGGG +
Preference number: 3 (lower is better)
Translates to: RQAQMASRQSQP*IQAGRTQAKEG
Trigger: CCCCTCCTTTGCCTGTGTCCTCCCGGCCTGGATCCATGGCTGACTCTGCCTGGAGGCCATTTGTGCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR-3UTR CAA 90 bp CCCACCAGCGCTGCTGAGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTTGTGGAAAGGGGAGGGCTCTaGGCCCACCTATTCCCACAT +
Preference number: 3 (lower is better)
Translates to: PTSAAERGEVVSPKQVLVERGGL*AHLFPH
Trigger: ATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTC...CACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAGCAGCGCTGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR CCA 72 bp TCACCTCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTTaGAAGACGGCGGGCGCAATGACACACCCACCGCCA +
Preference number: 3 (lower is better)
Translates to: SPPGWQLGEVRL*KTAGAMTHPPP
Trigger: TGGCGGTGGGTGTGTCATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR TCA 72 bp AATAGTCTGCTGTGCTGGAGAAAGGGCCGTGCTGACTaGTGGCTGGAGTGGACCAAGAAGCCCCGGGTGGCC +
Preference number: 3 (lower is better)
Translates to: NSLLCWRKGRAD*WLEWTKKPRVA
Trigger: GGCCACCCGGGGCTTCTTGGTCCACTCCAGCCATCAGTCAGCACGGCCCTTTCTCCAGCACAGCAGACTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR TCA 72 bp GCAGGTCCTTGTGGGGCCTCTACTGTGACTCAATACTaGCCTGGCACCTGCCTCCATGGCCTGCTCCTCTCC +
Preference number: 3 (lower is better)
Translates to: AGPCGASTVTQY*PGTCLHGLLLS
Trigger: GGAGAGGAGCAGGCCATGGAGGCAGGTGCCAGGTCAGTATTGAGTCACAGTAGAGGCCCCACAAGGACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR CCA 72 bp TGCCGCCACCAAGACTGCCAGCTCCCACCCACCTCGTaGCTGCCTGTTCATCTTGCTCCATTTCCTCCTAGC +
Preference number: 3 (lower is better)
Translates to: CRHQDCQLPPTS*LPVHLAPFPPS
Trigger: GCTAGGAGGAAATGGAGCAAGATGAACAGGCAGCCACGAGGTGGGTGGGAGCTGGCAGTCTTGGTGGCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR TCA 72 bp CCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTaGGCGGCTGCGTCTGACCCTGAACTCATGACCTTC +
Preference number: 3 (lower is better)
Translates to: PATLISPPPLLC*AAASDPELMTF
Trigger: GAAGGTCATGAGTTCAGGGTCAGACGCAGCCGCTCAGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR GCA 72 bp GCCACCAAGACTGCCAGCTCCCACCCACCTCGTGGCTaGCTGTTCATCTTGCTCCATTTCCTCCTAGCTGGA +
Preference number: 3 (lower is better)
Translates to: ATKTASSHPPRG*LFILLHFLLAG
Trigger: TCCAGCTAGGAGGAAATGGAGCAAGATGAACAGGCAGCCACGAGGTGGGTGGGAGCTGGCAGTCTTGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 72 bp CTGACTGATGGCTGGAGTGGACCAAGAAGCCCCGGGTaGCCCTCAGCAACAGTTTCAAGTTCCCACTCTGCC +
Preference number: 3 (lower is better)
Translates to: LTDGWSGPRSPG*PSATVSSSHSA
Trigger: GGCAGAGTGGGAACTTGAAACTGTTGCTGAGGGCCACCCGGGGCTTCTTGGTCCACTCCAGCCATCAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 72 bp TCTGGGAGGGTGGTTATCACCTCCTGGCTGGCAGCTTaGGGAAGTAAGGCTTTGGAAGACGGCGGGCGCAAT +
Preference number: 3 (lower is better)
Translates to: SGRVVITSWLAA*GSKALEDGGRN
Trigger: ATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGAGGTGATAACCACCCTCCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR CAA 90 bp TATCCTTTGTCCAAGGTACGAGAGGAGGCCTGGCGGTCACATCAACAGCGAGTGCACCCAAGCAGGTCCTaGTGGGGCCTCTACTGTGAC +
Preference number: 3 (lower is better)
Translates to: YPLSKVREEAWRSHQQRVHPSRS*WGLYCD
Trigger: GTCACAGTAGAGGCCCCACAAGGACCTGCTTGGGTG...CACTCGCTGTTGATGTGACCGCCAGGCCTCCTCTCGTACCTTGGACAAAGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR CCA 72 bp TGGCTGCCTGTTCATCTTGCTCCATTTCCTCCTAGCTaGAGGGATGGAGAAAGGGGAGGGCTCTTGGCCCAC +
Preference number: 3 (lower is better)
Translates to: WLPVHLAPFPPS*RDGERGGLLAH
Trigger: GTGGGCCAAGAGCCCTCCCCTTTCTCCATCCCTCCAGCTAGGAGGAAATGGAGCAAGATGAACAGGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 72 bp AGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTTGTaGGGCCTCTACTGTGACTCAATACTGACCTGGCAC +
Preference number: 3 (lower is better)
Translates to: RGERWSHPSRSL*GLYCDSILTWH
Trigger: GTGCCAGGTCAGTATTGAGTCACAGTAGAGGCCCCACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR CCA 72 bp GGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTaGTATCAGGCAGGCAGTGTGCATATGGGGCTCTCT +
Preference number: 3 (lower is better)
Translates to: GLLAHLFPHGSS*YQAGSVHMGLS
Trigger: AGAGAGCCCCATATGCACACTGCCTGCCTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 72 bp AGAGAAACTCTGGGAGGGTGGTTATCACCTCCTGGCTaGCAGCTTGGGGAAGTAAGGCTTTGGAAGACGGCG +
Preference number: 3 (lower is better)
Translates to: RETLGGWLSPPG*QLGEVRLWKTA
Trigger: CGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGAGGTGATAACCACCCTCCCAGAGTTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR GCA 72 bp TGTGATGGCCTAAATACCAGGGCACGGACAATAGTCTaGTGTGCTGGAGAAAGGGCCGTGCTGACTGATGGC +
Preference number: 3 (lower is better)
Translates to: CDGLNTRARTIV*CAGERAVLTDG
Trigger: GCCATCAGTCAGCACGGCCCTTTCTCCAGCACAGCAGACTATTGTCCGTGCCCTGGTATTTAGGCCATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 72 bp CAGGTGTATCCTTTGTCCAAGGTACGAGAGGAGGCCTaGCGGTCACATCAACAGCGAGTGAAGACAGAGGCA +
Preference number: 3 (lower is better)
Translates to: QVYPLSKVREEA*RSHQQRVKTEA
Trigger: TGCCTCTGTCTTCACTCGCTGTTGATGTGACCGCCAGGCCTCCTCTCGTACCTTGGACAAAGGATACACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR TCA 72 bp GTGTGCATATGGGGCTCTCTTGGGCCCCACCATATGTaGTGGCCTAAATACCAGGGCACGGACAATAGTCTG +
Preference number: 3 (lower is better)
Translates to: VCIWGSLGPHHM*WPKYQGTDNSL
Trigger: CAGACTATTGTCCGTGCCCTGGTATTTAGGCCATCACATATGGTGGGGCCCAAGAGAGCCCCATATGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CCA 72 bp GGTTTTCTGTCTGTCCTAAGAGCTTTCTGCATTTACTaGGTGAGAGAGAGGGCAGCTGTGCAGCGTTCGGCC +
Preference number: 3 (lower is better)
Translates to: GFLSVLRAFCIY*VRERAAVQRSA
Trigger: GGCCGAACGCTGCACAGCTGCCCTCTCTCTCACCCAGTAAATGCAGAAAGCTCTTAGGACAGACAGAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
ENST00000461919.5
3UTR-3UTR CAA 90 bp GGGGCTGTGAAAAGCTCTGATGCGACTCTCCTTATGCTGTCAGCTACAGCTAATTGGGGACAGGAGTCTTaGCCACAATCACCAGGCTTC +
Preference number: 3 (lower is better)
Translates to: GAVKSSDATLLMLSATANWGQES*PQSPGF
Trigger: GAAGCCTGGTGATTGTGGCAAAGACTCCTGTCCCCA...ATTAGCTGTAGCTGACAGCATAAGGAGAGTCGCATCAGAGCTTTTCACAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR-3UTR CAA 90 bp CTGACTCGGAGGAAGAACTTTCTGAAGTCCTTGGTGCATGACTTAGGAAAAACCTTCTTCCTCCTATCTTaGGCCAGGGCCTCTGGCTTC +
Preference number: 3 (lower is better)
Translates to: LTRRKNFLKSLVHDLGKTFFLLS*ARASGF
Trigger: GAAGCCAGAGGCCCTGGCCAAAGATAGGAGGAAGAA...GGTTTTTCCTAAGTCATGCACCAAGGACTTCAGAAAGTTCTTCCTCCGAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR TCA 72 bp ACTCTGGCCACATCAGTTCTTATAATCTCTCTGGGCTaGAGTGGCTGCTTCATTGCAGGGTTGGACCTTGTT +
Preference number: 3 (lower is better)
Translates to: TLATSVLIISLG*SGCFIAGLDLV
Trigger: AACAAGGTCCAACCCTGCAATGAAGCAGCCACTTCAGCCCAGAGAGATTATAAGAACTGATGTGGCCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR CCA 72 bp ATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATaGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGC +
Preference number: 3 (lower is better)
Translates to: ICCEFYILLSLP*FLYPRREAMRS
Trigger: GCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
ENST00000461919.5
3UTR-3UTR CAA 90 bp ACCAGATTTGACATTTCCTTACCGAACTTCCTTTCCCAGCAAGAATCCTATTTGGCATATGGGGCTCTCTaGGGCCCCACCATATGTGAT +
Preference number: 3 (lower is better)
Translates to: TRFDISLPNFLSQQESYLAYGAL*GPTICD
Trigger: ATCACATATGGTGGGGCCCAAGAGAGCCCCATATGC...CAAATAGGATTCTTGCTGGGAAAGGAAGTTCGGTAAGGAAATGTCAAATCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR GCA 72 bp CTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTaGCATGGTTTCTGTATCCTAGGAGAGAGGCGATGC +
Preference number: 3 (lower is better)
Translates to: LISAASFTFYFR*HGFCILGERRC
Trigger: GCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
ENST00000461919.5
3UTR CCA 72 bp AATCCTCATTTCAATGTGAGGGTAAGAAAACTATTCTaGTTCAGGTGTATCCTTTGTCCAAGGTACGAGAGG +
Preference number: 3 (lower is better)
Translates to: NPHFNVRVRKLF*FRCILCPRYER
Trigger: CCTCTCGTACCTTGGACAAAGGATACACCTGAACCAGAATAGTTTTCTTACCCTCACATTGAAATGAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
3UTR-3UTR CAA 90 bp CGCATCTATAAATTACATTCTATGGAGAGTTCTCTTTCTTCCTCCTATCTTTGGTACATTCTACTTTCGTaGCCATGGTTTCTGTATCCT +
Preference number: 3 (lower is better)
Translates to: RIYKLHSMESSLSSSYLWYILLS*PWFLYP
Trigger: AGGATACAGAAACCATGGCAACGAAAGTAGAATGTA...CCAAAGATAGGAGGAAGAAAGAGAACTCTCCATAGAATGTAATTTATAGATGCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
ENST00000461919.5
CDS-3UTR GCA 90 bp CCACCTCTGGCAAACGCTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTGCCCCACCAACCCCACTTaGGGCCTGCCCTCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: PPLANAGNRAQRPHSPGCPTNPT*GLPSCG
Trigger: GCCGCAGGAGGGCAGGCCGCAAGTGGGGTTGGTGGG...GCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAGCGTTTGCCAGAGGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GCGGAGCCTCCGCCAGCCCTGCGAGGGAGGGAAGCAGCCCCATGGCAGGTTTTCGGCGGCGGACTGGGGTaGGTGCAAAGGCCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: AEPPPALRGREAAPWQVFGGGLG*VQRPAC
Trigger: GCAAGCCGGCCTTTGCACCCACCCCAGTCCGCCGCC...GAAAACCTGCCATGGGGCTGCTTCCCTCCCTCGCAGGGCTGGCGGAGGCTCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR TCA 90 bp CCACCTCTGGCAAACGCTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTGCAGACGGCGGGCGCAATaGCACACCCACCGCCACAGG +
Preference number: 4 (lower is better)
Translates to: PPLANAGNRAQRPHSPGCRRRAQ*HTHRHR
Trigger: CCTGTGGCGGTGGGTGTGTCATTGCGCCCGCCGTCT...GCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAGCGTTTGCCAGAGGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp GCGGAGCCTCCGCCAGCCCTGCGAGGGAGGGAAGCAGCCCCATGGCAGGTTTTCCCGTGCCGGGCCGCCTaGCTCTTGTCATCGCCGAAC +
Preference number: 4 (lower is better)
Translates to: AEPPPALRGREAAPWQVFPCRAA*LLSSPN
Trigger: GTTCGGCGATGACAAGAGCCAGGCGGCCCGGCACGG...GAAAACCTGCCATGGGGCTGCTTCCCTCCCTCGCAGGGCTGGCGGAGGCTCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR GCA 90 bp CTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTGCAGAAGGAGGGAGCCTGAGCAGGCCCCACAGCTaGTCGGTCTCTGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGTEPSAPIRRAAEGGSLSRPHS*SVSGGW
Trigger: CCAGCCTCCAGAGACCGAGCAGCTGTGGGGCCTGCT...CAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp GGGCGTGGGGGCAGAGCACCGGGGCCACAGTGGGTAGGCACTCTGGCCACATCACCCCATTCGCCGGGCTaGAGAAGGAGGGAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GRGGRAPGPQWVGTLATSPHSPG*RRREPA
Trigger: AGCAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGG...TGATGTGGCCAGAGTGCCTACCCACTGTGGCCCCGGTGCTCTGCCCCCACGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp GCGGAGCCTCCGCCAGCCCTGCGAGGGAGGGAAGCAGCCCCATGGCAGGTTTTCTTGCCACTGCACCGCTaGACCGTGCTGCCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: AEPPPALRGREAAPWQVFLPLHR*TVLPAR
Trigger: TCGAGCGGGCAGCACGGTGCAGCGGTGCAGTGGCAA...GAAAACCTGCCATGGGGCTGCTTCCCTCCCTCGCAGGGCTGGCGGAGGCTCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp AGCCCAGCGCCCCCATTCGCCGGGCTGCAGAAGGAGGGAGCCTGCTACCAGCAAAAATCCCCATGCCCATaGCCGTGCCGGGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: SPAPPFAGLQKEGACYQQKSPCP*PCRAAW
Trigger: CCAGGCGGCCCGGCACGGCCATGGGCATGGGGATTT...TTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGGGCGCTGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp CAGAGGCAGCCACGGGCACTGCCTTTTCTTCAGGAGTCGAGGAGGCTGCCCTGGCCATGCCCATGGCCGTaGCGGGCCGCCTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: QRQPRALPFLQESRRLPWPCPWP*RAAWLL
Trigger: CAAGAGCCAGGCGGCCCGGCACGGCCATGGGCATGG...CCAGGGCAGCCTCCTCGACTCCTGAAGAAAAGGCAGTGCCCGTGGCTGCCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp CTGGGCACCAGGACAAAGAGCCCACCAGCGCTGCTGAGAGGGGAGAGGTGGTCTCCATGCCCATGGCCGTaGCGGGCCGCCTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LGTRTKSPPALLRGERWSPCPWP*RAAWLL
Trigger: CAAGAGCCAGGCGGCCCGGCACGGCCATGGGCATGG...AGACCACCTCTCCCCTCTCAGCAGCGCTGGTGGGCTCTTTGTCCTGGTGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTCCGCCAGCCCTGCGAGGTCCGAGGCGGCGGACTaGGGTGGGTGCAAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GFCILGERRCGASASPARSEAAD*GGCKGR
Trigger: CCGGCCTTTGCACCCACCCCAGTCCGCCGCCTCGGA...CCTCGCAGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR TCA 90 bp GGGAGGACAGCATCGCTAGAGGGCGGAAACCGACCTTGGTTTCCCAGCAGGCCCGGAGGCCTGCACCTCTaGCAGTCGGCTGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRTASLEGGNRPWFPSRPGGLHL*QSAAAG
Trigger: CCCAGCTGCAGCCGACTGTCAGAGGTGCAGGCCTCC...GGGCCTGCTGGGAAACCAAGGTCGGTTTCCGCCCTCTAGCGATGCTGTCCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR TCA 90 bp AGCCCAGCGCCCCCATTCGCCGGGCTGCAGAAGGAGGGAGCCTGCTACCAGCAACCAGGCTGCCAGGTGTaGCGGCATTCGAGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: SPAPPFAGLQKEGACYQQPGCQV*RHSREC
Trigger: GCACTCTCTCGAATGCCGTCACACCTGGCAGCCTGG...TTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGGGCGCTGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp AGCCCAGCGCCCCCATTCGCCGGGCTGCAGAAGGAGGGAGCCTGCTACCAGCAACCTCTGACAGTCGGCTaGAGCTGGGGGTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: SPAPPFAGLQKEGACYQQPLTVG*SWGCPS
Trigger: AGATGGGCACCCCCAGCTGCAGCCGACTGTCAGAGG...TTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGGGCGCTGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp GGCCGGATGCCTGTGGCTTCCAGGCTGCCAGGTGTGACGGCATTCGAGAGAGTGACCCCACTTGCGGCCTaGCCTCCTGCGGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: GRMPVASRLPGVTAFERVTPLAA*PPAAAQ
Trigger: CTGTGCTGCCGCAGGAGGGCAGGCCGCAAGTGGGGT...CACTCTCTCGAATGCCGTCACACCTGGCAGCCTGGAAGCCACAGGCATCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp TGTTCCCTTCCTCAGACCGCAGGCGAGATGCCTGGGCAAGGCCGGATGCCTGTGACCGCTGCACCGTGCTaGCCGCTCGACCCCCACCAA +
Preference number: 4 (lower is better)
Translates to: CSLPQTAGEMPGQGRMPVTAAPC*PLDPHQ
Trigger: TTGGTGGGGGTCGAGCGGGCAGCACGGTGCAGCGGT...CACAGGCATCCGGCCTTGCCCAGGCATCTCGCCTGCGGTCTGAGGAAGGGAACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp CTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTGCAGAAGGAGGGAGCCTGGCCCTGGCTCATACTTaGACCTCGGTGGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LGTEPSAPIRRAAEGGSLALAHT*TSVVWL
Trigger: CAGCCACACCACCGAGGTCCAAGTATGAGCCAGGGC...CAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTGAGCGGGGTCCCCCACACCCCTaGAGCCAGGGAGCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: GACYQQLSFPLHPSCAERGPPHP*SQGAER
Trigger: CCGCTCTGCTCCCTGGCTCCAGGGGTGTGGGGGACC...CCGCTCAGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp CTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTGCAGAAGGAGGGAGCCTGAGGCAGAGTCAGCCATaGATCCAGGCCGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: LGTEPSAPIRRAAEGGSLRQSQP*IQAGRT
Trigger: TGTCCTCCCGGCCTGGATCCATGGCTGACTCTGCCT...CAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GGGCGTGGGGGCAGAGCACCGGGGCCACAGTGGGTAGGCACTCTGGCCACATCAGCTTCTCCTGAGAGGTaGCTGGTGGTGGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: GRGGRAPGPQWVGTLATSASPER*LVVAPV
Trigger: CACAGGAGCCACCACCAGCCACCTCTCAGGAGAAGC...TGATGTGGCCAGAGTGCCTACCCACTGTGGCCCCGGTGCTCTGCCCCCACGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTCCGCCAGCCCTGCGAGGTCGAGGAGGCTGCCCTaGGGTCCCGGCACCACTGAC +
Preference number: 4 (lower is better)
Translates to: GFCILGERRCGASASPARSRRLP*GPGTTD
Trigger: GTCAGTGGTGCCGGGACCCCAGGGCAGCCTCCTCGA...CCTCGCAGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp CTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTGCAGAAGGAGGGAGCCTGGGGCCCCACCATATGTaGTGGCCTAAATACCAGGGC +
Preference number: 4 (lower is better)
Translates to: LGTEPSAPIRRAAEGGSLGPHHM*WPKYQG
Trigger: GCCCTGGTATTTAGGCCATCACATATGGTGGGGCCC...CAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR TCA 90 bp GGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTGAGCGGCCACCCCTCCTGTGCTaGGCGGCTGCGTCTGACCCT +
Preference number: 4 (lower is better)
Translates to: GACYQQLSFPLHPSCAERPPLLC*AAASDP
Trigger: AGGGTCAGACGCAGCCGCTCAGCACAGGAGGGGTGG...CCGCTCAGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp AAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTAGGGCCCGCGGCCCCTaGCGCCACCAAGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: KEGACYQQLSFPLHPSCARARGP*RHQDCQ
Trigger: CTGGCAGTCTTGGTGGCGGCAGGGGCCGCGGGCCCT...AGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTCCGCCAGCCCTGCGAGGCACTCTGCCTGGTTCTaGGGTCCCCCACACCCCTGG +
Preference number: 4 (lower is better)
Translates to: GFCILGERRCGASASPARHSAWF*GPPHPW
Trigger: CCAGGGGTGTGGGGGACCCCAGAACCAGGCAGAGTG...CCTCGCAGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp AGCCCAGCGCCCCCATTCGCCGGGCTGCAGAAGGAGGGAGCCTGCTACCAGCAAAGTTCCCACTCTGCCTaGTTCTGGGGTCCCCCACAC +
Preference number: 4 (lower is better)
Translates to: SPAPPFAGLQKEGACYQQSSHSA*FWGPPH
Trigger: GTGTGGGGGACCCCAGAACCAGGCAGAGTGGGAACT...TTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGGGCGCTGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp CTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTGCAGAAGGAGGGAGCCTGCTCCCACCCACCTCGTaGCTGCCTGTTCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: LGTEPSAPIRRAAEGGSLLPPTS*LPVHLA
Trigger: AGCAAGATGAACAGGCAGCCACGAGGTGGGTGGGAG...CAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GGGAGGACAGCATCGCTAGAGGGCGGAAACCGACCTTGGTTTCCCAGCAGGCCCCGCAGGCGAGATGCCTaGGCAAGGCCGGATGCCTGT +
Preference number: 4 (lower is better)
Translates to: GRTASLEGGNRPWFPSRPRRRDA*ARPDAC
Trigger: ACAGGCATCCGGCCTTGCCCAGGCATCTCGCCTGCG...GGGCCTGCTGGGAAACCAAGGTCGGTTTCCGCCCTCTAGCGATGCTGTCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GCGGAGCCTCCGCCAGCCCTGCGAGGGAGGGAAGCAGCCCCATGGCAGGTTTTCTGCATTTTGGGAGAGTaGTCCCTGACCCTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: AEPPPALRGREAAPWQVFCILGE*SLTLSP
Trigger: CGGGCTGAGGGTCAGGGACCACTCTCCCAAAATGCA...GAAAACCTGCCATGGGGCTGCTTCCCTCCCTCGCAGGGCTGGCGGAGGCTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461919.5
3UTR CAA 72 bp GGGGAGGACAGCATCGCTAGAGGGCGGAAACCGACCTaGGTTTCCCAGCAGGCCCCACAGCTGCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: GEDSIARGRKPT*VSQQAPQLLGL
Trigger: GAGACCGAGCAGCTGTGGGGCCTGCTGGGAAACCAAGGTCGGTTTCCGCCCTCTAGCGATGCTGTCCTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR TCA 90 bp CAGAGGCAGCCACGGGCACTGCCTTTTCTTCAGGAGTCGAGGAGGCTGCCCTGGTGGTGGTGGCTCCTGTaGGGGAGGAAAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QRQPRALPFLQESRRLPWWWWLL*GRKGSW
Trigger: CCAGCTGCCTTTCCTCCCTCACAGGAGCCACCACCA...CCAGGGCAGCCTCCTCGACTCCTGAAGAAAAGGCAGTGCCCGTGGCTGCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp GCGGAGCCTCCGCCAGCCCTGCGAGGGAGGGAAGCAGCCCCATGGCAGGTTTTCTTTGCTCTGCATCCCTaGCTGGCAGGCTCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: AEPPPALRGREAAPWQVFFALHP*LAGSSE
Trigger: CTCACTTGAGCCTGCCAGTCAGGGATGCAGAGCAAA...GAAAACCTGCCATGGGGCTGCTTCCCTCCCTCGCAGGGCTGGCGGAGGCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR GCA 90 bp CCACCTCTGGCAAACGCTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTGCGCACGGACAATAGTCTaGTGTGCTGGAGAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PPLANAGNRAQRPHSPGCARTIV*CAGERA
Trigger: GGCCCTTTCTCCAGCACAGCAGACTATTGTCCGTGC...GCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAGCGTTTGCCAGAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp GCGGAGCCTCCGCCAGCCCTGCGAGGGAGGGAAGCAGCCCCATGGCAGGTTTTCCACCCACCTCGTGGCTaGCTGTTCATCTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: AEPPPALRGREAAPWQVFHPPRG*LFILLH
Trigger: ATGGAGCAAGATGAACAGGCAGCCACGAGGTGGGTG...GAAAACCTGCCATGGGGCTGCTTCCCTCCCTCGCAGGGCTGGCGGAGGCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp ACTCATGACCTTCTGTTCCCTTCCTCAGACCGCAGGCGAGATGCCTGGGCAAGGTGCACCGCTGCACCGTaGTGCCCGCTCGACCCCCAC +
Preference number: 4 (lower is better)
Translates to: THDLLFPSSDRRRDAWARCTAAP*CPLDPH
Trigger: GTGGGGGTCGAGCGGGCAGCACGGTGCAGCGGTGCA...CCTTGCCCAGGCATCTCGCCTGCGGTCTGAGGAAGGGAACAGAAGGTCATGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp TCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTTGGAAGACGGCGGGCGCAATGACCCGTGCCGGGCCGCCTaGCTCTTGTCATCGCCGAAC +
Preference number: 4 (lower is better)
Translates to: SWLAAWGSKALEDGGRNDPCRAA*LLSSPN
Trigger: GTTCGGCGATGACAAGAGCCAGGCGGCCCGGCACGG...GTCATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GGCCGGATGCCTGTGGCTTCCAGGCTGCCAGGTGTGACGGCATTCGAGAGAGTGCAGCTGCTCGGTCTCTaGAGGCTGGAGGTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GRMPVASRLPGVTAFERVQLLGL*RLEVRL
Trigger: CAGCCTGACCTCCAGCCTCCAGAGACCGAGCAGCTG...CACTCTCTCGAATGCCGTCACACCTGGCAGCCTGGAAGCCACAGGCATCCGGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GCGGAGCCTCCGCCAGCCCTGCGAGGGAGGGAAGCAGCCCCATGGCAGGTTTTCAGGGAAGCAGCCCCATaGCAGGTTTTCTGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: AEPPPALRGREAAPWQVFREAAP*QVFCLS
Trigger: GGACAGACAGAAAACCTGCCATGGGGCTGCTTCCCT...GAAAACCTGCCATGGGGCTGCTTCCCTCCCTCGCAGGGCTGGCGGAGGCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CCA 90 bp ATCACCTCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTTGGAAGACGGCGGGCGCGCACCGGGGCCACAGTaGGTAGGCACTCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: ITSWLAAWGSKALEDGGRAPGPQ*VGTLAT
Trigger: TGTGGCCAGAGTGCCTACCCACTGTGGCCCCGGTGC...GCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGAGGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTCCGCCAGCCCTGCGAGGATGGAGGACTGGCGGTaGCTGAGGTCAGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: GFCILGERRCGASASPARMEDWR*LRSAPP
Trigger: GGGAGGTGCTGACCTCAGCCACCGCCAGTCCTCCAT...CCTCGCAGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR CCA 90 bp GCGGAGCCTCCGCCAGCCCTGCGAGGGAGGGAAGCAGCCCCATGGCAGGTTTTCGACCCTCAGGTGTCCTaGCAAATACAGCCCGAAACC +
Preference number: 4 (lower is better)
Translates to: AEPPPALRGREAAPWQVFDPQVS*QIQPET
Trigger: GGTTTCGGGCTGTATTTGCCAGGACACCTGAGGGTC...GAAAACCTGCCATGGGGCTGCTTCCCTCCCTCGCAGGGCTGGCGGAGGCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR TCA 90 bp GCGGAGCCTCCGCCAGCCCTGCGAGGGAGGGAAGCAGCCCCATGGCAGGTTTTCGTGAGAAGGCACAGGTaGAGGAGCTTCCTAAACTGC +
Preference number: 4 (lower is better)
Translates to: AEPPPALRGREAAPWQVFVRRHR*RSFLNC
Trigger: GCAGTTTAGGAAGCTCCTTCACCTGTGCCTTCTCAC...GAAAACCTGCCATGGGGCTGCTTCCCTCCCTCGCAGGGCTGGCGGAGGCTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR GCA 90 bp ATTCGCCGGGCTGCAGAAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTCGGTGGAAATCCCCATaGCCATGGCCGTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: IRRAAEGGSLLPATLISPRWKSP*PWPCRA
Trigger: GGCCCGGCACGGCCATGGGCATGGGGATTTCCACCG...AGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp AGCCCAGCGCCCCCATTCGCCGGGCTGCAGAAGGAGGGAGCCTGCTACCAGCAACACCCACCTCGTGGCTaGCTGTTCATCTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SPAPPFAGLQKEGACYQQHPPRG*LFILLH
Trigger: ATGGAGCAAGATGAACAGGCAGCCACGAGGTGGGTG...TTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGGGCGCTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp CAGAGGCAGCCACGGGCACTGCCTTTTCTTCAGGAGTCGAGGAGGCTGCCCTGGTCTGTGGGTGGGGGTTaGTCACCGGCAGTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: QRQPRALPFLQESRRLPWSVGGG*SPAVCG
Trigger: ACCACAGACTGCCGGTGACCAACCCCCACCCACAGA...CCAGGGCAGCCTCCTCGACTCCTGAAGAAAAGGCAGTGCCCGTGGCTGCCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp TGTTCCCTTCCTCAGACCGCAGGCGAGATGCCTGGGCAAGGCCGGATGCCTGTGAGTTCCCACTCTGCCTaGTTCTGGGGTCCCCCACAC +
Preference number: 4 (lower is better)
Translates to: CSLPQTAGEMPGQGRMPVSSHSA*FWGPPH
Trigger: GTGTGGGGGACCCCAGAACCAGGCAGAGTGGGAACT...CACAGGCATCCGGCCTTGCCCAGGCATCTCGCCTGCGGTCTGAGGAAGGGAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GGCCGGATGCCTGTGGCTTCCAGGCTGCCAGGTGTGACGGCATTCGAGAGAGTGCAGGCAGTGTGCATATaGGGCTCTCTTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GRMPVASRLPGVTAFERVQAVCI*GSLGPH
Trigger: GTGGGGCCCAAGAGAGCCCCATATGCACACTGCCTG...CACTCTCTCGAATGCCGTCACACCTGGCAGCCTGGAAGCCACAGGCATCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp TGTTCCCTTCCTCAGACCGCAGGCGAGATGCCTGGGCAAGGCCGGATGCCTGTGCAGGCAGTGTGCATATaGGGCTCTCTTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: CSLPQTAGEMPGQGRMPVQAVCI*GSLGPH
Trigger: GTGGGGCCCAAGAGAGCCCCATATGCACACTGCCTG...CACAGGCATCCGGCCTTGCCCAGGCATCTCGCCTGCGGTCTGAGGAAGGGAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp TTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTCCGCCAGCCCTGCGAGGGAGAGGCAGAGTCAGCCATaGATCCAGGCCGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: FCILGERRCGASASPARERQSQP*IQAGRT
Trigger: TGTCCTCCCGGCCTGGATCCATGGCTGACTCTGCCT...CTCCCTCGCAGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp GGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTCCGCCAGCCCTGCGAGGCTGAGAGGGGAGAGGTaGTCTCACCCAAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GFCILGERRCGASASPARLRGER*SHPSRS
Trigger: GGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAG...CCTCGCAGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp CCCACCAGCGCTGCTGAGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTTGTGCTGAGAGGGGAGAGGTaGTCTCACCCAAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PTSAAERGEVVSPKQVLVLRGER*SHPSRS
Trigger: GGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAG...CACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAGCAGCGCTGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GCGGAGCCTCCGCCAGCCCTGCGAGGGAGGGAAGCAGCCCCATGGCAGGTTTTCTTATCACCTCCTGGCTaGCAGCTTGGGGAAGTAAGG +
Preference number: 4 (lower is better)
Translates to: AEPPPALRGREAAPWQVFLSPPG*QLGEVR
Trigger: CCTTACTTCCCCAAGCTGCCAGCCAGGAGGTGATAA...GAAAACCTGCCATGGGGCTGCTTCCCTCCCTCGCAGGGCTGGCGGAGGCTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp CCACCTCTGGCAAACGCTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTGCAGCCGAGAGAAACTCTaGGAGGGTGGTTATCACCTC +
Preference number: 4 (lower is better)
Translates to: PPLANAGNRAQRPHSPGCSREKL*EGGYHL
Trigger: GAGGTGATAACCACCCTCCCAGAGTTTCTCTCGGCT...GCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAGCGTTTGCCAGAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR TCA 90 bp TGTTCCCTTCCTCAGACCGCAGGCGAGATGCCTGGGCAAGGCCGGATGCCTGTGTTCTCTGGGCTTGGCTaGAGTGGCCACCTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: CSLPQTAGEMPGQGRMPVFSGLG*SGHLWQ
Trigger: TTGCCAGAGGTGGCCACTTCAGCCAAGCCCAGAGAA...CACAGGCATCCGGCCTTGCCCAGGCATCTCGCCTGCGGTCTGAGGAAGGGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR TCA 90 bp CCCTGTGGCACCTATAAGGCAAAGCCCACTGAGGGACTTAGGGGTGGGGAAATGGCCCACCAGCGCTGCTaGGAGGGGAGAGGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: PCGTYKAKPTEGLRGGEMAHQRC*EGRGGL
Trigger: GAGACCACCTCTCCCCTCTCAGCAGCGCTGGTGGGC...CATTTCCCCACCCCTAAGTCCCTCAGTGGGCTTTGCCTTATAGGTGCCACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp CCCACCAGCGCTGCTGAGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTTGTGCCCGGCACCACTGACTaGCTCGGAGGAAGAACTTTC +
Preference number: 4 (lower is better)
Translates to: PTSAAERGEVVSPKQVLVPGTTD*LGGRTF
Trigger: GAAAGTTCTTCCTCCGAGTCAGTCAGTGGTGCCGGG...CACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAGCAGCGCTGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp TTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTCCGCCCGGCGTCCACATGGCTaGCCGCCGCTGGACTCTTGC +
Preference number: 4 (lower is better)
Translates to: FRCHGFCILGERRCGASARRPHG*PPLDSC
Trigger: GCAAGAGTCCAGCGGCGGTCAGCCATGTGGACGCCG...GGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR GCA 90 bp GGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTGAGCGGGACCAGGGCCAAAGCTaGCAGGAGTTGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GACYQQLSFPLHPSCAERDQGQS*QELQGG
Trigger: TCCACCCTGCAACTCCTGGCAGCTTTGGCCCTGGTC...CCGCTCAGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp CCCTGTGGCACCTATAAGGCAAAGCCCACTGAGGGACTTAGGGGTGGGGAAATGACCGCTGCACCGTGCTaGCCGCTCGACCCCCACCAA +
Preference number: 4 (lower is better)
Translates to: PCGTYKAKPTEGLRGGEMTAAPC*PLDPHQ
Trigger: TTGGTGGGGGTCGAGCGGGCAGCACGGTGCAGCGGT...CATTTCCCCACCCCTAAGTCCCTCAGTGGGCTTTGCCTTATAGGTGCCACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp GCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGGCAGGCAGTGTTGCACCGCTGCACCGTaGTGCCCGCTCGACCCCCAC +
Preference number: 4 (lower is better)
Translates to: ALGPPIPTWFFLVSGRQCCTAAP*CPLDPH
Trigger: GTGGGGGTCGAGCGGGCAGCACGGTGCAGCGGTGCA...ACACTGCCTGCCTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp AAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTCTAGGAGAGAGGCGATaGGGAGCCTCCGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: KEGACYQQLSFPLHPSCALGERR*GASASP
Trigger: AGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAG...AGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp AAGAAGCCCCGGGTGGCCCTCAGCAACAGTTTCAAGTTCCCACTCTGCCTGGTTCCGTGCCGGGCCGCCTaGCTCTTGTCATCGCCGAAC +
Preference number: 4 (lower is better)
Translates to: KKPRVALSNSFKFPLCLVPCRAA*LLSSPN
Trigger: GTTCGGCGATGACAAGAGCCAGGCGGCCCGGCACGG...AACCAGGCAGAGTGGGAACTTGAAACTGTTGCTGAGGGCCACCCGGGGCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GAAAGGGGAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGGGTCCCCCACACCCCTaGAGCCAGGGAGCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: ERGGLLAHLFPHGSSWYQGPPHP*SQGAER
Trigger: CCGCTCTGCTCCCTGGCTCCAGGGGTGTGGGGGACC...CTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp ATTCGCCGGGCTGCAGAAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTCGCAGGCGAGATGCCTaGGCAAGGCCGGATGCCTGT +
Preference number: 4 (lower is better)
Translates to: IRRAAEGGSLLPATLISPRRRDA*ARPDAC
Trigger: ACAGGCATCCGGCCTTGCCCAGGCATCTCGCCTGCG...AGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GGCGGAAACCGACCTTGGTTTCCCAGCAGGCCCCACAGCTGCTCGGTCTCTGGACTGCCCACACTTCTCTaGGCTTGGCTGAAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GGNRPWFPSRPHSCSVSGLPTLL*AWLKWP
Trigger: TGGCCACTTCAGCCAAGCCCAGAGAAGTGTGGGCAG...TCCAGAGACCGAGCAGCTGTGGGGCCTGCTGGGAAACCAAGGTCGGTTTCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp CCACCTCTGGCAAACGCTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTGCAGGGATTTCATAGTCTaGGGAGGAGAGTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: PPLANAGNRAQRPHSPGCRDFIV*GGEWQQ
Trigger: CTGTTGCCACTCTCCTCCCCAGACTATGAAATCCCT...GCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAGCGTTTGCCAGAGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
3UTR CAA 72 bp ATCACCTCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTaGGAAGACGGCGGGCGCAATGACACACCCACCGCC +
Preference number: 4 (lower is better)
Translates to: ITSWLAAWGSKA*EDGGRNDTPTA
Trigger: GGCGGTGGGTGTGTCATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGAGGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
CDS-3UTR TCA 90 bp GTGGCCCTCAGCAACAGTTTCAAGTTCCCACTCTGCCTGGTTCTGGGGTCCCCCAAGGGCCGTGCTGACTaGTGGCTGGAGTGGACCAAG +
Preference number: 4 (lower is better)
Translates to: VALSNSFKFPLCLVLGSPKGRAD*WLEWTK
Trigger: CTTGGTCCACTCCAGCCATCAGTCAGCACGGCCCTT...GGGGGACCCCAGAACCAGGCAGAGTGGGAACTTGAAACTGTTGCTGAGGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR TCA 90 bp GGGCACCCACACAGAGAAGAACCTTCACTGCTTCTGCCCACACTTCTCTGGGCTGCCTCTGGCTTCTCCTaGGAGGTGGCTGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: GHPHREEPSLLLPTLLWAASGFS*EVAGGG
Trigger: GCCACCACCAGCCACCTCTCAGGAGAAGCCAGAGGC...AGCCCAGAGAAGTGTGGGCAGAAGCAGTGAAGGTTCTTCTCTGTGTGGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR TCA 90 bp GGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTCCGCCAGCCCTGCGAGGACTGGCAGGCTCAAGTaGGAAGGCACAGGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: GFCILGERRCGASASPARTGRLK*EGTGEG
Trigger: TCCTTCACCTGTGCCTTCTCACTTGAGCCTGCCAGT...CCTCGCAGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR GCA 90 bp AGCCCAGCGCCCCCATTCGCCGGGCTGCAGAAGGAGGGAGCCTGCTACCAGCAAAAGCCTTCCTTCTGCTaGTTCTCCTTCCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SPAPPFAGLQKEGACYQQKPSFC*FSFQQL
Trigger: CAACTGCTGGAAGGAGAAGCAGCAGAAGGAAGGCTT...TTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGGGCGCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp AAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTCCTCTGACAGTCGGCTaGAGCTGGGGGTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: KEGACYQQLSFPLHPSCAPLTVG*SWGCPS
Trigger: AGATGGGCACCCCCAGCTGCAGCCGACTGTCAGAGG...AGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp GGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTGAGCGGTTCAAGTTCCCACTCTaGCTGGTTCTGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: GACYQQLSFPLHPSCAERFKFPL*LVLGSP
Trigger: GGGGGACCCCAGAACCAGGCAGAGTGGGAACTTGAA...CCGCTCAGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp GGGATGGAGAAAGGGGAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTTGCCGCCACCAAGACTaGCAGCTCCCACCCACCTCG +
Preference number: 4 (lower is better)
Translates to: GMEKGEGSWPTYSHMVLPCRHQD*QLPPTS
Trigger: CGAGGTGGGTGGGAGCTGGCAGTCTTGGTGGCGGCA...AGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTCTCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp AAGAAGCCCCGGGTGGCCCTCAGCAACAGTTTCAAGTTCCCACTCTGCCTGGTTCTGGGCAAGGCCGGATaGCTGTGGCTTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: KKPRVALSNSFKFPLCLVLGKAG*LWLPGC
Trigger: GCAGCCTGGAAGCCACAGGCATCCGGCCTTGCCCAG...AACCAGGCAGAGTGGGAACTTGAAACTGTTGCTGAGGGCCACCCGGGGCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp GGGATGGAGAAAGGGGAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTAGACCGCAGGCGAGATaGCTGGGCAAGGCCGGATGC +
Preference number: 4 (lower is better)
Translates to: GMEKGEGSWPTYSHMVLPRPQAR*LGKAGC
Trigger: GCATCCGGCCTTGCCCAGGCATCTCGCCTGCGGTCT...AGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTCTCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp GGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTCCGCCAGCCCTGCGAGGGTGCAAAGGCCGGCTTaGATTTTGGGAGAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: GFCILGERRCGASASPARVQRPA*ILGEWS
Trigger: GGACCACTCTCCCAAAATGCAAGCCGGCCTTTGCAC...CCTCGCAGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR CCA 90 bp TGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTGAGCGGCTGCGTACTCGCCTGTGGATGTaGCCCACGGACGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: CYQQLSFPLHPSCAERLRTRLWM*PTDGLG
Trigger: TCCAAGACCGTCCGTGGGCCACATCCACAGGCGAGT...ACGCAGCCGCTCAGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp ATTCGCCGGGCTGCAGAAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTGGGTGGAGGCAGCCCTaGCTCATACTTGGACCTCGG +
Preference number: 4 (lower is better)
Translates to: IRRAAEGGSLLPATLISPGWRQP*LILGPR
Trigger: CCGAGGTCCAAGTATGAGCCAGGGCTGCCTCCACCC...AGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GTGGACCAAGAAGCCCCGGGTGGCCCTCAGCAACAGTTTCAAGTTCCCACTCTGGGCGGAAACCGACCTTaGTTTCCCAGCAGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: VDQEAPGGPQQQFQVPTLGGNRP*FPSRPH
Trigger: GTGGGGCCTGCTGGGAAACCAAGGTCGGTTTCCGCC...CAGAGTGGGAACTTGAAACTGTTGCTGAGGGCCACCCGGGGCTTCTTGGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GCTGCTGAGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTTGTGGGGCCTCTATGGGCTTGGCTGAAGTaGCCACCTCTGGCAAACGCT +
Preference number: 4 (lower is better)
Translates to: AAERGEVVSPKQVLVGPLWAWLK*PPLANA
Trigger: AGCGTTTGCCAGAGGTGGCCACTTCAGCCAAGCCCA...TAGAGGCCCCACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp GGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTGAGCGGTGGGCTTGGCTGAAGTaGCCACCTCTGGCAAACGCT +
Preference number: 4 (lower is better)
Translates to: GACYQQLSFPLHPSCAERWAWLK*PPLANA
Trigger: AGCGTTTGCCAGAGGTGGCCACTTCAGCCAAGCCCA...CCGCTCAGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GGGAGGACAGCATCGCTAGAGGGCGGAAACCGACCTTGGTTTCCCAGCAGGCCCACACTTCTCTGGGCTTaGCTGAAGTGGCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: GRTASLEGGNRPWFPSRPTLLWA*LKWPPL
Trigger: CAGAGGTGGCCACTTCAGCCAAGCCCAGAGAAGTGT...GGGCCTGCTGGGAAACCAAGGTCGGTTTCCGCCCTCTAGCGATGCTGTCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp TCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTTGGAAGACGGCGGGCGCAATGACGCTTCTCCTGAGAGGTaGCTGGTGGTGGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SWLAAWGSKALEDGGRNDASPER*LVVAPV
Trigger: CACAGGAGCCACCACCAGCCACCTCTCAGGAGAAGC...GTCATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp CCCACCAGCGCTGCTGAGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTTGTGCCAAGCAGGTCCTTGTaGGGCCTCTACTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: PTSAAERGEVVSPKQVLVPSRSL*GLYCDS
Trigger: TGAGTCACAGTAGAGGCCCCACAAGGACCTGCTTGG...CACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAGCAGCGCTGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp GGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTCCGCCAGCCCTGCGAGGCCCAGCCCTTCCCACTaGTATCTGCTGCGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: GFCILGERRCGASASPARPSPSH*YLLRVL
Trigger: TAAAACTCGCAGCAGATATCAGTGGGAAGGGCTGGG...CCTCGCAGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR TCA 90 bp ATCACCTCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTTGGAAGACGGCGGGCGCGTGGGGCCTCTACTGTaGCTCAATACTGACCTGGCA +
Preference number: 4 (lower is better)
Translates to: ITSWLAAWGSKALEDGGRVGPLL*LNTDLA
Trigger: TGCCAGGTCAGTATTGAGTCACAGTAGAGGCCCCAC...GCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGAGGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp GGGATGGAGAAAGGGGAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGGTCCCGGCACCACTaGCTGACTCGGAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: GMEKGEGSWPTYSHMVLPGSRHH*LTRRKN
Trigger: GTTCTTCCTCCGAGTCAGTCAGTGGTGCCGGGACCC...AGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTCTCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp GGCGGAAACCGACCTTGGTTTCCCAGCAGGCCCCACAGCTGCTCGGTCTCTGGACCGAACTGGTCATACTaGTTCCTCTTCTCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: GGNRPWFPSRPHSCSVSGPNWSY*FLFSGL
Trigger: CAACCCGGAGAAGAGGAAGCAGTATGACCAGTTCGG...TCCAGAGACCGAGCAGCTGTGGGGCCTGCTGGGAAACCAAGGTCGGTTTCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp GCTTTGGAAGACGGCGGGCGCAATGACACACCCACCGCCACAGGAAAACATGGTCACCCTGGTTGTCCCTaGGGTCCTGCCTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ALEDGGRNDTPTATGKHGHPGCP*GPAFAG
Trigger: ACCAGCAAAGGCAGGACCGCAGGGACAACCAGGGTG...ACCATGTTTTCCTGTGGCGGTGGGTGTGTCATTGCGCCCGCCGTCTTCCAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp GGCCGGATGCCTGTGGCTTCCAGGCTGCCAGGTGTGACGGCATTCGAGAGAGTGAGCAAGCCTTCCTTCTaGTGCTTCTCCTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GRMPVASRLPGVTAFERVSKPSF*CFSFQQ
Trigger: CTGCTGGAAGGAGAAGCAGCAGAAGGAAGGCTTGCT...CACTCTCTCGAATGCCGTCACACCTGGCAGCCTGGAAGCCACAGGCATCCGGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp GCATATGGGGCTCTCTTGGGCCCCACCATATGTGATGGCCTAAATACCAGGGCACCCCATTCGCCGGGCTaGAGAAGGAGGGAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: AYGALLGPTICDGLNTRAPHSPG*RRREPA
Trigger: AGCAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGG...TGCCCTGGTATTTAGGCCATCACATATGGTGGGGCCCAAGAGAGCCCCATATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp GTGGCACCTATAAGGCAAAGCCCACTGAGGGACTTAGGGGTGGGGAAATGGTTAACCCCACTTGCGGCCTaGCCTCCTGCGGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: VAPIRQSPLRDLGVGKWLTPLAA*PPAAAQ
Trigger: CTGTGCTGCCGCAGGAGGGCAGGCCGCAAGTGGGGT...TAACCATTTCCCCACCCCTAAGTCCCTCAGTGGGCTTTGCCTTATAGGTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp GCGGAGCCTCCGCCAGCCCTGCGAGGGAGGGAAGCAGCCCCATGGCAGGTTTTCTATCATGATTACTGCTaGCATCAAAACCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AEPPPALRGREAAPWQVFYHDYC*HQNQAG
Trigger: CCCAGCCTGGTTTTGATGGCAGCAGTAATCATGATA...GAAAACCTGCCATGGGGCTGCTTCCCTCCCTCGCAGGGCTGGCGGAGGCTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GCATATGGGGCTCTCTTGGGCCCCACCATATGTGATGGCCTAAATACCAGGGCAAGCCCGCCATCACCCTaGTTGTCCCTGCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: AYGALLGPTICDGLNTRASPPSP*LSLRSC
Trigger: GCAGGACCGCAGGGACAACCAGGGTGATGGCGGGCT...TGCCCTGGTATTTAGGCCATCACATATGGTGGGGCCCAAGAGAGCCCCATATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GAAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCATACTTGGACCTCGGTaGTGTGGCTGGCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: EGGSLLPATLISPPPLLCILGPR*CGWPRT
Trigger: AGTCCTGGGCCAGCCACACCACCGAGGTCCAAGTAT...GCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp TGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTGAGCGGCTGCGTATACTTGGACCTCGGTaGTGTGGCTGGCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: CYQQLSFPLHPSCAERLRILGPR*CGWPRT
Trigger: AGTCCTGGGCCAGCCACACCACCGAGGTCCAAGTAT...ACGCAGCCGCTCAGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GGGATGGAGAAAGGGGAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGGTGGAGGCAGCCCTaGCTCATACTTGGACCTCGG +
Preference number: 4 (lower is better)
Translates to: GMEKGEGSWPTYSHMVLPGWRQP*LILGPR
Trigger: CCGAGGTCCAAGTATGAGCCAGGGCTGCCTCCACCC...AGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTCTCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GGCAATGATGGAGCTGTGCCCTGTGGCACCTATAAGGCAAAGCCCACTGAGGGAGGCGGAAACCGACCTTaGTTTCCCAGCAGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GNDGAVPCGTYKAKPTEGGGNRP*FPSRPH
Trigger: GTGGGGCCTGCTGGGAAACCAAGGTCGGTTTCCGCC...TCCCTCAGTGGGCTTTGCCTTATAGGTGCCACAGGGCACAGCTCCATCATTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp TATCAGGCAGGCAGTGTGCATATGGGGCTCTCTTGGGCCCCACCATATGTGATGCACTCTGCCTGGTTCTaGGGTCCCCCACACCCCTGG +
Preference number: 4 (lower is better)
Translates to: YQAGSVHMGLSWAPPYVMHSAWF*GPPHPW
Trigger: CCAGGGGTGTGGGGGACCCCAGAACCAGGCAGAGTG...CATCACATATGGTGGGGCCCAAGAGAGCCCCATATGCACACTGCCTGCCTGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTCCGCCAGCCCTGCGAGGCCATTTCCTCCTAGCTaGAGGGATGGAGAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: GFCILGERRCGASASPARPFPPS*RDGERG
Trigger: TCCCCTTTCTCCATCCCTCCAGCTAGGAGGAAATGG...CCTCGCAGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp CAGAGGCAGCCACGGGCACTGCCTTTTCTTCAGGAGTCGAGGAGGCTGCCCTGGTTAGGGGTGGGGAAATaGTTAGGTAGATCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QRQPRALPFLQESRRLPWLGVGK*LGRSWP
Trigger: GGGCCAGGATCTACCTAACCATTTCCCCACCCCTAA...CCAGGGCAGCCTCCTCGACTCCTGAAGAAAAGGCAGTGCCCGTGGCTGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GCTGCTGAGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTTGTGGGGCCTCTAGTGGTTATCACCTCCTaGCTGGCAGCTTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: AAERGEVVSPKQVLVGPLVVITS*LAAWGS
Trigger: ACTTCCCCAAGCTGCCAGCCAGGAGGTGATAACCAC...TAGAGGCCCCACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp CAGAGGCAGCCACGGGCACTGCCTTTTCTTCAGGAGTCGAGGAGGCTGCCCTGGAGCCGAGAGAAACTCTaGGAGGGTGGTTATCACCTC +
Preference number: 4 (lower is better)
Translates to: QRQPRALPFLQESRRLPWSREKL*EGGYHL
Trigger: GAGGTGATAACCACCCTCCCAGAGTTTCTCTCGGCT...CCAGGGCAGCCTCCTCGACTCCTGAAGAAAAGGCAGTGCCCGTGGCTGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp ATTCGCCGGGCTGCAGAAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTTTCTCTGGGCTTGGCTaGAGTGGCCACCTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: IRRAAEGGSLLPATLISPFSGLG*SGHLWQ
Trigger: TTGCCAGAGGTGGCCACTTCAGCCAAGCCCAGAGAA...AGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR TCA 90 bp TATCCTTTGTCCAAGGTACGAGAGGAGGCCTGGCGGTCACATCAACAGCGAGTGGGGTCCCGGCACCACTaGCTGACTCGGAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: YPLSKVREEAWRSHQQRVGSRHH*LTRRKN
Trigger: GTTCTTCCTCCGAGTCAGTCAGTGGTGCCGGGACCC...CACTCGCTGTTGATGTGACCGCCAGGCCTCCTCTCGTACCTTGGACAAAGGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp ATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCCATGCCCATGGCCGTaGCGGGCCGCCTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ILLSLPWFLYPRREAMRSPCPWP*RAAWLL
Trigger: CAAGAGCCAGGCGGCCCGGCACGGCCATGGGCATGG...GCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR GCA 90 bp GGAAAAACCAGTGGCAATGATGGAGCTGTGCCCTGTGGCACCTATAAGGCAAAGCGGTGGAAATCCCCATaGCCATGGCCGTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GKTSGNDGAVPCGTYKAKRWKSP*PWPCRA
Trigger: GGCCCGGCACGGCCATGGGCATGGGGATTTCCACCG...CTTTGCCTTATAGGTGCCACAGGGCACAGCTCCATCATTGCCACTGGTTTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp TGGGTGAGAGAGAGGGCAGCTGTGCAGCGTTCGGCCTCCAATTCCATTTTAATTCGGTGGAAATCCCCATaGCCATGGCCGTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: WVRERAAVQRSASNSILIRWKSP*PWPCRA
Trigger: GGCCCGGCACGGCCATGGGCATGGGGATTTCCACCG...AATTAAAATGGAATTGGAGGCCGAACGCTGCACAGCTGCCCTCTCTCTCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR GCA 90 bp GTGGACCAAGAAGCCCCGGGTGGCCCTCAGCAACAGTTTCAAGTTCCCACTCTGAGCGCATGCGGCCGTTaGTGTAGACGTGGACGTTAC +
Preference number: 4 (lower is better)
Translates to: VDQEAPGGPQQQFQVPTLSACGR*CRRGRY
Trigger: GTAACGTCCACGTCTACAGCAACGGCCGCATGCGCT...CAGAGTGGGAACTTGAAACTGTTGCTGAGGGCCACCCGGGGCTTCTTGGTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp TGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTGAGCGGCTGCGTGGGGACAGGAGTCTTTaGCACAATCACCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: CYQQLSFPLHPSCAERLRGDRSL*HNHQAS
Trigger: GGAAGCCTGGTGATTGTGGCAAAGACTCCTGTCCCC...ACGCAGCCGCTCAGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp GAAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCATCAGGCAGGCAGTGTaGATATGGGGCTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: EGGSLLPATLISPPPLLCIRQAV*IWGSLG
Trigger: CCCAAGAGAGCCCCATATGCACACTGCCTGCCTGAT...GCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp ACTCATGACCTTCTGTTCCCTTCCTCAGACCGCAGGCGAGATGCCTGGGCAAGGCGGCATTCGAGAGAGTaGCTCAGATCCCACCAGAGG +
Preference number: 4 (lower is better)
Translates to: THDLLFPSSDRRRDAWARRHSRE*LRSHQR
Trigger: CCTCTGGTGGGATCTGAGGCACTCTCTCGAATGCCG...CCTTGCCCAGGCATCTCGCCTGCGGTCTGAGGAAGGGAACAGAAGGTCATGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp CTGGGCACCAGGACAAAGAGCCCACCAGCGCTGCTGAGAGGGGAGAGGTGGTCTCAGAAGGAGGGAGCCTaGTACCAGCAACTCTCATTT +
Preference number: 4 (lower is better)
Translates to: LGTRTKSPPALLRGERWSQKEGA*YQQLSF
Trigger: AAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTCTG...AGACCACCTCTCCCCTCTCAGCAGCGCTGGTGGGCTCTTTGTCCTGGTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp GCTGCTGAGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTTGTGGGGCCTCTAGCAATGATGGAGCTGTaGCCTGTGGCACCTATAAGG +
Preference number: 4 (lower is better)
Translates to: AAERGEVVSPKQVLVGPLAMMEL*PVAPIR
Trigger: CCTTATAGGTGCCACAGGGCACAGCTCCATCATTGC...TAGAGGCCCCACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp TTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTCCGCCGCGGACTGGGGTGGGTaGAAAGGCCGGCTTGCATTT +
Preference number: 4 (lower is better)
Translates to: FRCHGFCILGERRCGASAADWGG*KGRLAF
Trigger: AAATGCAAGCCGGCCTTTGCACCCACCCCAGTCCGC...GGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR CCA 90 bp ATCACCTCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTTGGAAGACGGCGGGCGCCCTTGTTGGATTCCATaGCGGAACCAGAACGCGGAA +
Preference number: 4 (lower is better)
Translates to: ITSWLAAWGSKALEDGGRPCWIP*RNQNAE
Trigger: TTCCGCGTTCTGGTTCCGCCATGGAATCCAACAAGG...GCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGAGGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp CCCTGTGGCACCTATAAGGCAAAGCCCACTGAGGGACTTAGGGGTGGGGAAATGTCTGTGGGTGGGGGTTaGTCACCGGCAGTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PCGTYKAKPTEGLRGGEMSVGGG*SPAVCG
Trigger: ACCACAGACTGCCGGTGACCAACCCCCACCCACAGA...CATTTCCCCACCCCTAAGTCCCTCAGTGGGCTTTGCCTTATAGGTGCCACAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GGAAAAACCAGTGGCAATGATGGAGCTGTGCCCTGTGGCACCTATAAGGCAAAGAAATCCCCATGCCCATaGCCGTGCCGGGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GKTSGNDGAVPCGTYKAKKSPCP*PCRAAW
Trigger: CCAGGCGGCCCGGCACGGCCATGGGCATGGGGATTT...CTTTGCCTTATAGGTGCCACAGGGCACAGCTCCATCATTGCCACTGGTTTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp TTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTCCGCCACTCGCCTGTGGATGTaGCCCACGGACGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: FRCHGFCILGERRCGASATRLWM*PTDGLG
Trigger: TCCAAGACCGTCCGTGGGCCACATCCACAGGCGAGT...GGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CCA 90 bp AAGAAGCCCCGGGTGGCCCTCAGCAACAGTTTCAAGTTCCCACTCTGCCTGGTTCCTCGGTGGTGTGGCTaGCCCAGGACTATCCATGCA +
Preference number: 4 (lower is better)
Translates to: KKPRVALSNSFKFPLCLVPRWCG*PRTIHA
Trigger: TGCATGGATAGTCCTGGGCCAGCCACACCACCGAGG...AACCAGGCAGAGTGGGAACTTGAAACTGTTGCTGAGGGCCACCCGGGGCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GGCAATGATGGAGCTGTGCCCTGTGGCACCTATAAGGCAAAGCCCACTGAGGGACCTCGGTGGTGTGGCTaGCCCAGGACTATCCATGCA +
Preference number: 4 (lower is better)
Translates to: GNDGAVPCGTYKAKPTEGPRWCG*PRTIHA
Trigger: TGCATGGATAGTCCTGGGCCAGCCACACCACCGAGG...TCCCTCAGTGGGCTTTGCCTTATAGGTGCCACAGGGCACAGCTCCATCATTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GGGATGGAGAAAGGGGAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTCCTCGGTGGTGTGGCTaGCCCAGGACTATCCATGCA +
Preference number: 4 (lower is better)
Translates to: GMEKGEGSWPTYSHMVLPPRWCG*PRTIHA
Trigger: TGCATGGATAGTCCTGGGCCAGCCACACCACCGAGG...AGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTCTCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp AAGAAGCCCCGGGTGGCCCTCAGCAACAGTTTCAAGTTCCCACTCTGCCTGGTTTGGACCTCGGTGGTGTaGCTGGCCCAGGACTATCCA +
Preference number: 4 (lower is better)
Translates to: KKPRVALSNSFKFPLCLVWTSVV*LAQDYP
Trigger: TGGATAGTCCTGGGCCAGCCACACCACCGAGGTCCA...AACCAGGCAGAGTGGGAACTTGAAACTGTTGCTGAGGGCCACCCGGGGCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GAAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCAAAGGGGAGGGCTCTTaGCCCACCTATTCCCACATG +
Preference number: 4 (lower is better)
Translates to: EGGSLLPATLISPPPLLCKGEGS*PTYSHM
Trigger: CATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTT...GCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GCATATGGGGCTCTCTTGGGCCCCACCATATGTGATGGCCTAAATACCAGGGCAACCTCTGGCAAACGCTaGGAACAGAGCCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: AYGALLGPTICDGLNTRATSGKR*EQSPAP
Trigger: GGGCGCTGGGCTCTGTTCCCAGCGTTTGCCAGAGGT...TGCCCTGGTATTTAGGCCATCACATATGGTGGGGCCCAAGAGAGCCCCATATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR TCA 90 bp ATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCCACCCCTCCTGTGCTaGGCGGCTGCGTCTGACCCT +
Preference number: 4 (lower is better)
Translates to: ILLSLPWFLYPRREAMRSPPLLC*AAASDP
Trigger: AGGGTCAGACGCAGCCGCTCAGCACAGGAGGGGTGG...GCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR TCA 90 bp GCTGCTGAGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTTGTGGGGCCTCTAGGCTGTGAAAAGCTCTaGTGCGACTCTCCTTATGCT +
Preference number: 4 (lower is better)
Translates to: AAERGEVVSPKQVLVGPLGCEKL*CDSPYA
Trigger: AGCATAAGGAGAGTCGCATCAGAGCTTTTCACAGCC...TAGAGGCCCCACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp GGCGGAAACCGACCTTGGTTTCCCAGCAGGCCCCACAGCTGCTCGGTCTCTGGAGAAGTCCTTGGTGCATaGCTTAGGAAAAACCAGTGG +
Preference number: 4 (lower is better)
Translates to: GGNRPWFPSRPHSCSVSGEVLGA*LRKNQW
Trigger: CCACTGGTTTTTCCTAAGTCATGCACCAAGGACTTC...TCCAGAGACCGAGCAGCTGTGGGGCCTGCTGGGAAACCAAGGTCGGTTTCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp GAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGGCAGGCAAGCGCATGCGGCCGTTaGTGTAGACGTGGACGTTAC +
Preference number: 4 (lower is better)
Translates to: EGSWPTYSHMVLPGIRQASACGR*CRRGRY
Trigger: GTAACGTCCACGTCTACAGCAACGGCCGCATGCGCT...TGCCTGCCTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp GCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGGCAGGCAGTGTCACCCTGGTTGTCCCTaGGGTCCTGCCTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ALGPPIPTWFFLVSGRQCHPGCP*GPAFAG
Trigger: ACCAGCAAAGGCAGGACCGCAGGGACAACCAGGGTG...ACACTGCCTGCCTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp CAGCTAATGTCTAGCAAAAACATCACCAGGGTACCTTCCCCAAACAGGCCTCATCCCACCAACCCCACTTaGGGCCTGCCCTCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: QLMSSKNITRVPSPNRPHPTNPT*GLPSCG
Trigger: GCCGCAGGAGGGCAGGCCGCAAGTGGGGTTGGTGGG...ATGAGGCCTGTTTGGGGAAGGTACCCTGGTGATGTTTTTGCTAGACATTAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp GCGGAGCCTCCGCCAGCCCTGCGAGGGAGGGAAGCAGCCCCATGGCAGGTTTTCCCCACTGATATCTGCTaGGAGTTTTACATTCTACTT +
Preference number: 4 (lower is better)
Translates to: AEPPPALRGREAAPWQVFPTDIC*EFYILL
Trigger: AAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGG...GAAAACCTGCCATGGGGCTGCTTCCCTCCCTCGCAGGGCTGGCGGAGGCTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CCA 90 bp GCTCCTCTCCAGGTTAACCATAATCCTGAGGCCTTCGCGGGTTCACACTATCATAGCCCGCCATCACCCTaGTTGTCCCTGCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: APLQVNHNPEAFAGSHYHSPPSP*LSLRSC
Trigger: GCAGGACCGCAGGGACAACCAGGGTGATGGCGGGCT...ATGATAGTGTGAACCCGCGAAGGCCTCAGGATTATGGTTAACCTGGAGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp TGGGTGAGAGAGAGGGCAGCTGTGCAGCGTTCGGCCTCCAATTCCATTTTAATTAGCCCGCCATCACCCTaGTTGTCCCTGCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: WVRERAAVQRSASNSILISPPSP*LSLRSC
Trigger: GCAGGACCGCAGGGACAACCAGGGTGATGGCGGGCT...AATTAAAATGGAATTGGAGGCCGAACGCTGCACAGCTGCCCTCTCTCTCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CCA 90 bp TATCCTTTGTCCAAGGTACGAGAGGAGGCCTGGCGGTCACATCAACAGCGAGTGACTCGCCTGTGGATGTaGCCCACGGACGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: YPLSKVREEAWRSHQQRVTRLWM*PTDGLG
Trigger: TCCAAGACCGTCCGTGGGCCACATCCACAGGCGAGT...CACTCGCTGTTGATGTGACCGCCAGGCCTCCTCTCGTACCTTGGACAAAGGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GTGTATCCTTTGTCCAAGGTACGAGAGGAGGCCTGGCGGTCACATCAACAGCGAACTCGCCTGTGGATGTaGCCCACGGACGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: VYPLSKVREEAWRSHQQRTRLWM*PTDGLG
Trigger: TCCAAGACCGTCCGTGGGCCACATCCACAGGCGAGT...TCGCTGTTGATGTGACCGCCAGGCCTCCTCTCGTACCTTGGACAAAGGATACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GGGCACCCACACAGAGAAGAACCTTCACTGCTTCTGCCCACACTTCTCTGGGCTGTGCTGACTGATGGCTaGAGTGGACCAAGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: GHPHREEPSLLLPTLLWAVLTDG*SGPRSP
Trigger: GGGGCTTCTTGGTCCACTCCAGCCATCAGTCAGCAC...AGCCCAGAGAAGTGTGGGCAGAAGCAGTGAAGGTTCTTCTCTGTGTGGGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GAAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCCCATTTCCTCCTAGCTaGAGGGATGGAGAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: EGGSLLPATLISPPPLLCPFPPS*RDGERG
Trigger: TCCCCTTTCTCCATCCCTCCAGCTAGGAGGAAATGG...GCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp AAGAAGCCCCGGGTGGCCCTCAGCAACAGTTTCAAGTTCCCACTCTGCCTGGTTCTCCCACCCACCTCGTaGCTGCCTGTTCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: KKPRVALSNSFKFPLCLVLPPTS*LPVHLA
Trigger: AGCAAGATGAACAGGCAGCCACGAGGTGGGTGGGAG...AACCAGGCAGAGTGGGAACTTGAAACTGTTGCTGAGGGCCACCCGGGGCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GCTTTGGAAGACGGCGGGCGCAATGACACACCCACCGCCACAGGAAAACATGGTACACTTCTCTGGGCTTaGCTGAAGTGGCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: ALEDGGRNDTPTATGKHGTLLWA*LKWPPL
Trigger: CAGAGGTGGCCACTTCAGCCAAGCCCAGAGAAGTGT...ACCATGTTTTCCTGTGGCGGTGGGTGTGTCATTGCGCCCGCCGTCTTCCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp GCTCCTCTCCAGGTTAACCATAATCCTGAGGCCTTCGCGGGTTCACACTATCATGGGCTGGAGGGCTCCTaGGCACCAGGACAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: APLQVNHNPEAFAGSHYHGLEGS*APGQRA
Trigger: GGCTCTTTGTCCTGGTGCCCAGGAGCCCTCCAGCCC...ATGATAGTGTGAACCCGCGAAGGCCTCAGGATTATGGTTAACCTGGAGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp AGTAAGGCTTTGGAAGACGGCGGGCGCAATGACACACCCACCGCCACAGGAAAATGGTTAGGTAGATCCTaGCCCCCTCTGCAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SKALEDGGRNDTPTATGKWLGRS*PPLQAF
Trigger: GAAGGCCTGCAGAGGGGGCCAGGATCTACCTAACCA...TTTTCCTGTGGCGGTGGGTGTGTCATTGCGCCCGCCGTCTTCCAAAGCCTTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GGGATGGAGAAAGGGGAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGTACGAGAGGAGGCCTaGCGGTCACATCAACAGCGA +
Preference number: 4 (lower is better)
Translates to: GMEKGEGSWPTYSHMVLPVREEA*RSHQQR
Trigger: TCGCTGTTGATGTGACCGCCAGGCCTCCTCTCGTAC...AGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTCTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp GGCAATGATGGAGCTGTGCCCTGTGGCACCTATAAGGCAAAGCCCACTGAGGGAGTACGAGAGGAGGCCTaGCGGTCACATCAACAGCGA +
Preference number: 4 (lower is better)
Translates to: GNDGAVPCGTYKAKPTEGVREEA*RSHQQR
Trigger: TCGCTGTTGATGTGACCGCCAGGCCTCCTCTCGTAC...TCCCTCAGTGGGCTTTGCCTTATAGGTGCCACAGGGCACAGCTCCATCATTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp AGCCCAGCGCCCCCATTCGCCGGGCTGCAGAAGGAGGGAGCCTGCTACCAGCAAGCTTCATTGCAGGGTTaGACCTTGTTTAAAAACCAG +
Preference number: 4 (lower is better)
Translates to: SPAPPFAGLQKEGACYQQASLQG*TLFKNQ
Trigger: CTGGTTTTTAAACAAGGTCCAACCCTGCAATGAAGC...TTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAATGGGGGCGCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000338820.7
3UTR CAA 72 bp CTGAGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTaGTGGGGCCTCTACTGTGACTCAATACTGACCTGG +
Preference number: 4 (lower is better)
Translates to: LRGERWSHPSRS*WGLYCDSILTW
Trigger: CCAGGTCAGTATTGAGTCACAGTAGAGGCCCCACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
CDS-3UTR TCA 90 bp GCTTTGGAAGACGGCGGGCGCAATGACACACCCACCGCCACAGGAAAACATGGTTCCTTTCCCGAGTTTTaGGCGAGGGTGGAAGTGCTA +
Preference number: 4 (lower is better)
Translates to: ALEDGGRNDTPTATGKHGSFPEF*ARVEVL
Trigger: TAGCACTTCCACCCTCGCTCAAAACTCGGGAAAGGA...ACCATGTTTTCCTGTGGCGGTGGGTGTGTCATTGCGCCCGCCGTCTTCCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp TGGGTGAGAGAGAGGGCAGCTGTGCAGCGTTCGGCCTCCAATTCCATTTTAATTCCAGGCTGCCAGGTGTaGCGGCATTCGAGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: WVRERAAVQRSASNSILIPGCQV*RHSREC
Trigger: GCACTCTCTCGAATGCCGTCACACCTGGCAGCCTGG...AATTAAAATGGAATTGGAGGCCGAACGCTGCACAGCTGCCCTCTCTCTCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR TCA 90 bp GTGGCCCTCAGCAACAGTTTCAAGTTCCCACTCTGCCTGGTTCTGGGGTCCCCCGGCTGTGAAAAGCTCTaGTGCGACTCTCCTTATGCT +
Preference number: 4 (lower is better)
Translates to: VALSNSFKFPLCLVLGSPGCEKL*CDSPYA
Trigger: AGCATAAGGAGAGTCGCATCAGAGCTTTTCACAGCC...GGGGGACCCCAGAACCAGGCAGAGTGGGAACTTGAAACTGTTGCTGAGGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR TCA 90 bp GTGGACCAAGAAGCCCCGGGTGGCCCTCAGCAACAGTTTCAAGTTCCCACTCTGAAAAACCAGTGGCAATaGTGGAGCTGTGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: VDQEAPGGPQQQFQVPTLKNQWQ*WSCALW
Trigger: CCACAGGGCACAGCTCCATCATTGCCACTGGTTTTT...CAGAGTGGGAACTTGAAACTGTTGCTGAGGGCCACCCGGGGCTTCTTGGTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR TCA 90 bp GAAAGGGGAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGCACATCAACAGCGAGTaGAGACAGAGGCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: ERGGLLAHLFPHGSSWYQHINSE*RQRQPR
Trigger: CCGTGGCTGCCTCTGTCTTCACTCGCTGTTGATGTG...CTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR TCA 90 bp ATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCATCATCGGGAGGAGTaGGGGGCCCGGCTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: ILLSLPWFLYPRREAMRSHHREE*GARLQD
Trigger: GTCCTGAAGCCGGGCCCCTCACTCCTCCCGATGATG...GCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR GCA 90 bp GAAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCGAGCGAGGGTGGAAGTaGTACCGTATGTCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: EGGSLLPATLISPPPLLCERGWK*YRMSSK
Trigger: CTTAGAAGACATACGGTAGCACTTCCACCCTCGCTC...GCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp TCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTTGGAAGACGGCGGGCGCAATGACAAGCCTTCCTTCTGCTaGTTCTCCTTCCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SWLAAWGSKALEDGGRNDKPSFC*FSFQQL
Trigger: CAACTGCTGGAAGGAGAAGCAGCAGAAGGAAGGCTT...GTCATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp TATCAGGCAGGCAGTGTGCATATGGGGCTCTCTTGGGCCCCACCATATGTGATGTTCAAGTTCCCACTCTaGCTGGTTCTGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: YQAGSVHMGLSWAPPYVMFKFPL*LVLGSP
Trigger: GGGGGACCCCAGAACCAGGCAGAGTGGGAACTTGAA...CATCACATATGGTGGGGCCCAAGAGAGCCCCATATGCACACTGCCTGCCTGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp GCTTTGGAAGACGGCGGGCGCAATGACACACCCACCGCCACAGGAAAACATGGTGACAATAGTCTGCTGTaGTGGAGAAAGGGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: ALEDGGRNDTPTATGKHGDNSLL*WRKGRA
Trigger: AGCACGGCCCTTTCTCCAGCACAGCAGACTATTGTC...ACCATGTTTTCCTGTGGCGGTGGGTGTGTCATTGCGCCCGCCGTCTTCCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp GGGCACCCACACAGAGAAGAACCTTCACTGCTTCTGCCCACACTTCTCTGGGCTGCACGGACAATAGTCTaGTGTGCTGGAGAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: GHPHREEPSLLLPTLLWAARTIV*CAGERA
Trigger: GGCCCTTTCTCCAGCACAGCAGACTATTGTCCGTGC...AGCCCAGAGAAGTGTGGGCAGAAGCAGTGAAGGTTCTTCTCTGTGTGGGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp CCCACCAGCGCTGCTGAGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTTGTGGTCCTAAGAGCTTTCTaGATTTACTGGGTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: PTSAAERGEVVSPKQVLVVLRAF*IYWVRE
Trigger: CTCTCTCACCCAGTAAATGCAGAAAGCTCTTAGGAC...CACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAGCAGCGCTGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp TTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTCCGCCAGCCCTGCGAGGGAGATGCGACTCTCCTTATaGTGTCAGCTACAGCTAATG +
Preference number: 4 (lower is better)
Translates to: FCILGERRCGASASPAREMRLSL*CQLQLM
Trigger: CATTAGCTGTAGCTGACAGCATAAGGAGAGTCGCAT...CTCCCTCGCAGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GGGGCTGTGAAAAGCTCTGATGCGACTCTCCTTATGCTGTCAGCTACAGCTAATAGCGCCCGGTCGGGCTaGTTGCTCTGGATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GAVKSSDATLLMLSATANSARSG*LLWMAL
Trigger: CAAGGCCATCCAGAGCAACCAGCCCGACCGGGCGCT...ATTAGCTGTAGCTGACAGCATAAGGAGAGTCGCATCAGAGCTTTTCACAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp TATCAGGCAGGCAGTGTGCATATGGGGCTCTCTTGGGCCCCACCATATGTGATGAGAGGCAGGCACAAATaGCCTCCAGGCAGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: YQAGSVHMGLSWAPPYVMRGRHK*PPGRVS
Trigger: GCTGACTCTGCCTGGAGGCCATTTGTGCCTGCCTCT...CATCACATATGGTGGGGCCCAAGAGAGCCCCATATGCACACTGCCTGCCTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GGGATGGAGAAAGGGGAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGTCTGGGGAGGAGAGTaGCAACAGTTAGCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: GMEKGEGSWPTYSHMVLPVWGGE*QQLARH
Trigger: ATGCCGAGCTAACTGTTGCCACTCTCCTCCCCAGAC...AGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTCTCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GTGGCCCTCAGCAACAGTTTCAAGTTCCCACTCTGCCTGGTTCTGGGGTCCCCCGCTTTCTGCATTTACTaGGTGAGAGAGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: VALSNSFKFPLCLVLGSPAFCIY*VRERAA
Trigger: AGCTGCCCTCTCTCTCACCCAGTAAATGCAGAAAGC...GGGGGACCCCAGAACCAGGCAGAGTGGGAACTTGAAACTGTTGCTGAGGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp CTCCCTCCTCCCACTGGCGGCAAGTGCTGTTTTAAGCAAAATCCTCATTTCAATTCGAGGAGGCTGCCCTaGGGTCCCGGCACCACTGAC +
Preference number: 4 (lower is better)
Translates to: LPPPTGGKCCFKQNPHFNSRRLP*GPGTTD
Trigger: GTCAGTGGTGCCGGGACCCCAGGGCAGCCTCCTCGA...ATTGAAATGAGGATTTTGCTTAAAACAGCACTTGCCGCCAGTGGGAGGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp ACTCATGACCTTCTGTTCCCTTCCTCAGACCGCAGGCGAGATGCCTGGGCAAGGCGCCACAGGAAAACATaGTCATTCCAGAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: THDLLFPSSDRRRDAWARRHRKT*SFQKAQ
Trigger: CTGGGCCTTCTGGAATGACCATGTTTTCCTGTGGCG...CCTTGCCCAGGCATCTCGCCTGCGGTCTGAGGAAGGGAACAGAAGGTCATGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR TCA 90 bp GGCAATGATGGAGCTGTGCCCTGTGGCACCTATAAGGCAAAGCCCACTGAGGGATCCTTTCCCGAGTTTTaGGCGAGGGTGGAAGTGCTA +
Preference number: 4 (lower is better)
Translates to: GNDGAVPCGTYKAKPTEGSFPEF*ARVEVL
Trigger: TAGCACTTCCACCCTCGCTCAAAACTCGGGAAAGGA...TCCCTCAGTGGGCTTTGCCTTATAGGTGCCACAGGGCACAGCTCCATCATTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp TCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTTGGAAGACGGCGGGCGCAATGACGAAGTCCTTGGTGCATaGCTTAGGAAAAACCAGTGG +
Preference number: 4 (lower is better)
Translates to: SWLAAWGSKALEDGGRNDEVLGA*LRKNQW
Trigger: CCACTGGTTTTTCCTAAGTCATGCACCAAGGACTTC...GTCATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp GGGCACCCACACAGAGAAGAACCTTCACTGCTTCTGCCCACACTTCTCTGGGCTAGCAAGCCTTCCTTCTaGTGCTTCTCCTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GHPHREEPSLLLPTLLWASKPSF*CFSFQQ
Trigger: CTGCTGGAAGGAGAAGCAGCAGAAGGAAGGCTTGCT...AGCCCAGAGAAGTGTGGGCAGAAGCAGTGAAGGTTCTTCTCTGTGTGGGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp AAGAAGCCCCGGGTGGCCCTCAGCAACAGTTTCAAGTTCCCACTCTGCCTGGTTGACAATAGTCTGCTGTaGTGGAGAAAGGGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: KKPRVALSNSFKFPLCLVDNSLL*WRKGRA
Trigger: AGCACGGCCCTTTCTCCAGCACAGCAGACTATTGTC...AACCAGGCAGAGTGGGAACTTGAAACTGTTGCTGAGGGCCACCCGGGGCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp TCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAAGGGCCCGCGGCCCCTaGCGCCACCAAGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: SAASFTFYFRCHGFCILGRARGP*RHQDCQ
Trigger: CTGGCAGTCTTGGTGGCGGCAGGGGCCGCGGGCCCT...TCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp ACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGACTAGGAGAGAGGCGATaGGGAGCCTCCGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: TFYFRCHGFCILGERRCGLGERR*GASASP
Trigger: AGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAG...TCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CCA 90 bp GAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGGCAGGCAAATAGTCTGCTGTGCTaGAGAAAGGGCCGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: EGSWPTYSHMVLPGIRQANSLLC*RKGRAD
Trigger: GTCAGCACGGCCCTTTCTCCAGCACAGCAGACTATT...TGCCTGCCTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp GGGCACCCACACAGAGAAGAACCTTCACTGCTTCTGCCCACACTTCTCTGGGCTCATATGGGGCTCTCTTaGGCCCCACCATATGTGATG +
Preference number: 4 (lower is better)
Translates to: GHPHREEPSLLLPTLLWAHMGLS*APPYVM
Trigger: CATCACATATGGTGGGGCCCAAGAGAGCCCCATATG...AGCCCAGAGAAGTGTGGGCAGAAGCAGTGAAGGTTCTTCTCTGTGTGGGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp TATCCTTTGTCCAAGGTACGAGAGGAGGCCTGGCGGTCACATCAACAGCGAGTGAAAGGGGAGGGCTCTTaGCCCACCTATTCCCACATG +
Preference number: 4 (lower is better)
Translates to: YPLSKVREEAWRSHQQRVKGEGS*PTYSHM
Trigger: CATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTT...CACTCGCTGTTGATGTGACCGCCAGGCCTCCTCTCGTACCTTGGACAAAGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp CTCCCTCCTCCCACTGGCGGCAAGTGCTGTTTTAAGCAAAATCCTCATTTCAATGCACCGGGGCCACAGTaGGTAGGCACTCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: LPPPTGGKCCFKQNPHFNAPGPQ*VGTLAT
Trigger: TGTGGCCAGAGTGCCTACCCACTGTGGCCCCGGTGC...ATTGAAATGAGGATTTTGCTTAAAACAGCACTTGCCGCCAGTGGGAGGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
3UTR CAA 72 bp CTGGTATCAGGCAGGCAGTGTGCATATGGGGCTCTCTaGGGCCCCACCATATGTGATGGCCTAAATACCAGG +
Preference number: 4 (lower is better)
Translates to: LVSGRQCAYGAL*GPTICDGLNTR
Trigger: CCTGGTATTTAGGCCATCACATATGGTGGGGCCCAAGAGAGCCCCATATGCACACTGCCTGCCTGATACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp CCCTGTGGCACCTATAAGGCAAAGCCCACTGAGGGACTTAGGGGTGGGGAAATGAAGCCTTCCTTCTGCTaGTTCTCCTTCCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: PCGTYKAKPTEGLRGGEMKPSFC*FSFQQL
Trigger: CAACTGCTGGAAGGAGAAGCAGCAGAAGGAAGGCTT...CATTTCCCCACCCCTAAGTCCCTCAGTGGGCTTTGCCTTATAGGTGCCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp CTCCCTCCTCCCACTGGCGGCAAGTGCTGTTTTAAGCAAAATCCTCATTTCAATCCTCTGACAGTCGGCTaGAGCTGGGGGTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: LPPPTGGKCCFKQNPHFNPLTVG*SWGCPS
Trigger: AGATGGGCACCCCCAGCTGCAGCCGACTGTCAGAGG...ATTGAAATGAGGATTTTGCTTAAAACAGCACTTGCCGCCAGTGGGAGGAGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp TCCTTTAGGATCTATGTTCTTATTGCACATGGCTCAGCCCGTCTAGGGACATCTAGACCGCAGGCGAGATaGCTGGGCAAGGCCGGATGC +
Preference number: 4 (lower is better)
Translates to: SFRIYVLIAHGSARLGTSRPQAR*LGKAGC
Trigger: GCATCCGGCCTTGCCCAGGCATCTCGCCTGCGGTCT...AGATGTCCCTAGACGGGCTGAGCCATGTGCAATAAGAACATAGATCCTAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp TGGGTGAGAGAGAGGGCAGCTGTGCAGCGTTCGGCCTCCAATTCCATTTTAATTGGCAGCCACGGGCACTaGCTTTTCTTCAGGAGTCGA +
Preference number: 4 (lower is better)
Translates to: WVRERAAVQRSASNSILIGSHGH*LFFRSR
Trigger: TCGACTCCTGAAGAAAAGGCAGTGCCCGTGGCTGCC...AATTAAAATGGAATTGGAGGCCGAACGCTGCACAGCTGCCCTCTCTCTCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp TCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTTGGAAGACGGCGGGCGCAATGACGATCTATGTTCTTATTaGACATGGCTCAGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: SWLAAWGSKALEDGGRNDDLCSY*TWLSPS
Trigger: AGACGGGCTGAGCCATGTGCAATAAGAACATAGATC...GTCATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp ATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCTGGACCTCGGTGGTGTaGCTGGCCCAGGACTATCCA +
Preference number: 4 (lower is better)
Translates to: ILLSLPWFLYPRREAMRSWTSVV*LAQDYP
Trigger: TGGATAGTCCTGGGCCAGCCACACCACCGAGGTCCA...GCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp CAGCTAATGTCTAGCAAAAACATCACCAGGGTACCTTCCCCAAACAGGCCTCATACCTCTGGCAAACGCTaGGAACAGAGCCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: QLMSSKNITRVPSPNRPHTSGKR*EQSPAP
Trigger: GGGCGCTGGGCTCTGTTCCCAGCGTTTGCCAGAGGT...ATGAGGCCTGTTTGGGGAAGGTACCCTGGTGATGTTTTTGCTAGACATTAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp CCCTGTGGCACCTATAAGGCAAAGCCCACTGAGGGACTTAGGGGTGGGGAAATGAGGGATTTCATAGTCTaGGGAGGAGAGTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: PCGTYKAKPTEGLRGGEMRDFIV*GGEWQQ
Trigger: CTGTTGCCACTCTCCTCCCCAGACTATGAAATCCCT...CATTTCCCCACCCCTAAGTCCCTCAGTGGGCTTTGCCTTATAGGTGCCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp GTGGCACCTATAAGGCAAAGCCCACTGAGGGACTTAGGGGTGGGGAAATGGTTACCAAGCAGGTCCTTGTaGGGCCTCTACTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: VAPIRQSPLRDLGVGKWLPSRSL*GLYCDS
Trigger: TGAGTCACAGTAGAGGCCCCACAAGGACCTGCTTGG...TAACCATTTCCCCACCCCTAAGTCCCTCAGTGGGCTTTGCCTTATAGGTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GTGTATCCTTTGTCCAAGGTACGAGAGGAGGCCTGGCGGTCACATCAACAGCGACGCCACAGGAAAACATaGTCATTCCAGAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VYPLSKVREEAWRSHQQRRHRKT*SFQKAQ
Trigger: CTGGGCCTTCTGGAATGACCATGTTTTCCTGTGGCG...TCGCTGTTGATGTGACCGCCAGGCCTCCTCTCGTACCTTGGACAAAGGATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp TATCCTTTGTCCAAGGTACGAGAGGAGGCCTGGCGGTCACATCAACAGCGAGTGTCCTGGCTGGCAGCTTaGGGAAGTAAGGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: YPLSKVREEAWRSHQQRVSWLAA*GSKALE
Trigger: TTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGA...CACTCGCTGTTGATGTGACCGCCAGGCCTCCTCTCGTACCTTGGACAAAGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp ACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAATGGCTGACCGCCGCTaGACTCTTGCGGGCGATGGA +
Preference number: 4 (lower is better)
Translates to: TFYFRCHGFCILGERRCGMADRR*TLAGDG
Trigger: TCCATCGCCCGCAAGAGTCCAGCGGCGGTCAGCCAT...TCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR TCA 90 bp ACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGACCTCAGCCCGAGAGGTaGGAGGGAGTGAAGATACGG +
Preference number: 4 (lower is better)
Translates to: TFYFRCHGFCILGERRCGPQPER*EGVKIR
Trigger: CCGTATCTTCACTCCCTCTCACCTCTCGGGCTGAGG...TCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR TCA 90 bp TGGGTGAGAGAGAGGGCAGCTGTGCAGCGTTCGGCCTCCAATTCCATTTTAATTGGATTTCATAGTCTCTaGCAGTCGGCTGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: WVRERAAVQRSASNSILIGFHSL*QSAAAG
Trigger: CCCAGCTGCAGCCGACTGTCAGAGACTATGAAATCC...AATTAAAATGGAATTGGAGGCCGAACGCTGCACAGCTGCCCTCTCTCTCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR GCA 90 bp TATCCTTTGTCCAAGGTACGAGAGGAGGCCTGGCGGTCACATCAACAGCGAGTGGAGCGAGGGTGGAAGTaGTACCGTATGTCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: YPLSKVREEAWRSHQQRVERGWK*YRMSSK
Trigger: CTTAGAAGACATACGGTAGCACTTCCACCCTCGCTC...CACTCGCTGTTGATGTGACCGCCAGGCCTCCTCTCGTACCTTGGACAAAGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp TCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGACGGTGGAAATCCCCATaGCCATGGCCGTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SAASFTFYFRCHGFCILGRWKSP*PWPCRA
Trigger: GGCCCGGCACGGCCATGGGCATGGGGATTTCCACCG...TCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR GCA 90 bp TACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGCACCCTGGTTGTCCCTaGGGTCCTGCCTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: YILLSLPWFLYPRREAMRHPGCP*GPAFAG
Trigger: ACCAGCAAAGGCAGGACCGCAGGGACAACCAGGGTG...CCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR GCA 90 bp TATCAGGCAGGCAGTGTGCATATGGGGCTCTCTTGGGCCCCACCATATGTGATGCAGAAGGAGGGAGCCTaGTACCAGCAACTCTCATTT +
Preference number: 4 (lower is better)
Translates to: YQAGSVHMGLSWAPPYVMQKEGA*YQQLSF
Trigger: AAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTCTG...CATCACATATGGTGGGGCCCAAGAGAGCCCCATATGCACACTGCCTGCCTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp AAGAAGCCCCGGGTGGCCCTCAGCAACAGTTTCAAGTTCCCACTCTGCCTGGTTGAGAAGAACCTTCACTaGTTCTGCCCACACTTCTCT +
Preference number: 4 (lower is better)
Translates to: KKPRVALSNSFKFPLCLVEKNLH*FCPHFS
Trigger: AGAGAAGTGTGGGCAGAAGCAGTGAAGGTTCTTCTC...AACCAGGCAGAGTGGGAACTTGAAACTGTTGCTGAGGGCCACCCGGGGCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp ATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCGGCAGCCACGGGCACTaGCTTTTCTTCAGGAGTCGA +
Preference number: 4 (lower is better)
Translates to: ILLSLPWFLYPRREAMRSGSHGH*LFFRSR
Trigger: TCGACTCCTGAAGAAAAGGCAGTGCCCGTGGCTGCC...GCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp CCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTAAATCCCCATGCCCATaGCCGTGCCGGGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: PLISAASFTFYFRCHGFCKSPCP*PCRAAW
Trigger: CCAGGCGGCCCGGCACGGCCATGGGCATGGGGATTT...ACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CCA 90 bp TACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGGCCCTGGCTCATACTTaGACCTCGGTGGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: YILLSLPWFLYPRREAMRALAHT*TSVVWL
Trigger: CAGCCACACCACCGAGGTCCAAGTATGAGCCAGGGC...CCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp GGGGCTGTGAAAAGCTCTGATGCGACTCTCCTTATGCTGTCAGCTACAGCTAATGTGCTGACTGATGGCTaGAGTGGACCAAGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: GAVKSSDATLLMLSATANVLTDG*SGPRSP
Trigger: GGGGCTTCTTGGTCCACTCCAGCCATCAGTCAGCAC...ATTAGCTGTAGCTGACAGCATAAGGAGAGTCGCATCAGAGCTTTTCACAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp GCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGGCAGGCAGTGTCCACCTATTCCCACATaGTTCTTCCTGGTATCAGGC +
Preference number: 4 (lower is better)
Translates to: ALGPPIPTWFFLVSGRQCPPIPT*FFLVSG
Trigger: GCCTGATACCAGGAAGAACCATGTGGGAATAGGTGG...ACACTGCCTGCCTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp TTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCAGGGAAGCAGCCCCATaGCAGGTTTTCTGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: FYFRCHGFCILGERRCGAREAAP*QVFCLS
Trigger: GGACAGACAGAAAACCTGCCATGGGGCTGCTTCCCT...GGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CCA 90 bp ATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCGGGGAAGTAAGGCTTTaGAAGACGGCGGGCGCAATG +
Preference number: 4 (lower is better)
Translates to: ILLSLPWFLYPRREAMRSGEVRL*KTAGAM
Trigger: CATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCC...GCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp TTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCGAAACTCTGGGAGGGTaGTTATCACCTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FYFRCHGFCILGERRCGAETLGG*LSPPGW
Trigger: CCAGCCAGGAGGTGATAACCACCCTCCCAGAGTTTC...GGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp TTCCCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCGCCTCTGGCTTCTCCTaGGAGGTGGCTGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: FPLISAASFTFYFRCHGFASGFS*EVAGGG
Trigger: GCCACCACCAGCCACCTCTCAGGAGAAGCCAGAGGC...GAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR TCA 90 bp TCCTTGGTGCATGACTTAGGAAAAACCAGTGGCAATGATGGAGCTGTGCCCTGTGTGGGGCCTCTACTGTaGCTCAATACTGACCTGGCA +
Preference number: 4 (lower is better)
Translates to: SLVHDLGKTSGNDGAVPCVGPLL*LNTDLA
Trigger: TGCCAGGTCAGTATTGAGTCACAGTAGAGGCCCCAC...ACAGGGCACAGCTCCATCATTGCCACTGGTTTTTCCTAAGTCATGCACCAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp CTCCCTCCTCCCACTGGCGGCAAGTGCTGTTTTAAGCAAAATCCTCATTTCAATCACATCAACAGCGAGTaGAGACAGAGGCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: LPPPTGGKCCFKQNPHFNHINSE*RQRQPR
Trigger: CCGTGGCTGCCTCTGTCTTCACTCGCTGTTGATGTG...ATTGAAATGAGGATTTTGCTTAAAACAGCACTTGCCGCCAGTGGGAGGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp TCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAAGGACTGGCGGTGGCTaGGGTCAGCACCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: SAASFTFYFRCHGFCILGRTGGG*GQHLPP
Trigger: TGGTGGGAGGTGCTGACCTCAGCCACCGCCAGTCCT...TCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR TCA 90 bp ATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCGGTTTACTGAGTGGTaGTCACAAGCACCACCCGGT +
Preference number: 4 (lower is better)
Translates to: ILLSLPWFLYPRREAMRSRFTEW*SQAPPG
Trigger: ACCGGGTGGTGCTTGTGATCACCACTCAGTAAACCG...GCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR GCA 90 bp TTTCTTTGTTTGTCTTTCCTCAAATATACAGTCCATCACCTTGGCTCAGTGCATCCATGCCCATGGCCGTaGCGGGCCGCCTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: FLCLSFLKYTVHHLGSVHPCPWP*RAAWLL
Trigger: CAAGAGCCAGGCGGCCCGGCACGGCCATGGGCATGG...ATGCACTGAGCCAAGGTGATGGACTGTATATTTGAGGAAAGACAAACAAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
ENST00000463786.2
CDS-3UTR GCA 90 bp GGGGCTGTGAAAAGCTCTGATGCGACTCTCCTTATGCTGTCAGCTACAGCTAATGGGGACAGGAGTCTTTaGCACAATCACCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GAVKSSDATLLMLSATANGDRSL*HNHQAS
Trigger: GGAAGCCTGGTGATTGTGGCAAAGACTCCTGTCCCC...ATTAGCTGTAGCTGACAGCATAAGGAGAGTCGCATCAGAGCTTTTCACAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp TTCCCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCCTGGGCAAGGCCGGATaGCTGTGGCTTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: FPLISAASFTFYFRCHGFLGKAG*LWLPGC
Trigger: GCAGCCTGGAAGCCACAGGCATCCGGCCTTGCCCAG...GAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp TATCAGGCAGGCAGTGTGCATATGGGGCTCTCTTGGGCCCCACCATATGTGATGGAGAAGAACCTTCACTaGTTCTGCCCACACTTCTCT +
Preference number: 4 (lower is better)
Translates to: YQAGSVHMGLSWAPPYVMEKNLH*FCPHFS
Trigger: AGAGAAGTGTGGGCAGAAGCAGTGAAGGTTCTTCTC...CATCACATATGGTGGGGCCCAAGAGAGCCCCATATGCACACTGCCTGCCTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp CCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTCTAGGAGAGAGGCGATaGGGAGCCTCCGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PLISAASFTFYFRCHGFCLGERR*GASASP
Trigger: AGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAG...ACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR GCA 90 bp ATCACCTCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTTGGAAGACGGCGGGCGCACATTCTACTTTCGTTaGCATGGTTTCTGTATCCTA +
Preference number: 4 (lower is better)
Translates to: ITSWLAAWGSKALEDGGRTFYFR*HGFCIL
Trigger: TAGGATACAGAAACCATGGCAACGAAAGTAGAATGT...GCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGAGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp GCTTTGGAAGACGGCGGGCGCAATGACACACCCACCGCCACAGGAAAACATGGTCACTATCATGATTACTaGTGCCATCAAAACCAGGCT +
Preference number: 4 (lower is better)
Translates to: ALEDGGRNDTPTATGKHGHYHDY*CHQNQA
Trigger: AGCCTGGTTTTGATGGCAGCAGTAATCATGATAGTG...ACCATGTTTTCCTGTGGCGGTGGGTGTGTCATTGCGCCCGCCGTCTTCCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp CTGACTCGGAGGAAGAACTTTCTGAAGTCCTTGGTGCATGACTTAGGAAAAACCGGCTGGAGGTCAGGCTaGGGACAGGAGTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LTRRKNFLKSLVHDLGKTGWRSG*GQESLP
Trigger: TGGCAAAGACTCCTGTCCCCAGCCTGACCTCCAGCC...GGTTTTTCCTAAGTCATGCACCAAGGACTTCAGAAAGTTCTTCCTCCGAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp CTCCCTCCTCCCACTGGCGGCAAGTGCTGTTTTAAGCAAAATCCTCATTTCAATCTGCCCACACTTCTCTaGGCTTGGCTGAAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LPPPTGGKCCFKQNPHFNLPTLL*AWLKWP
Trigger: TGGCCACTTCAGCCAAGCCCAGAGAAGTGTGGGCAG...ATTGAAATGAGGATTTTGCTTAAAACAGCACTTGCCGCCAGTGGGAGGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp AAACTATTCTGGTTCAGGTGTATCCTTTGTCCAAGGTACGAGAGGAGGCCTGGCGAAACTCTGGGAGGGTaGTTATCACCTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KLFWFRCILCPRYERRPGETLGG*LSPPGW
Trigger: CCAGCCAGGAGGTGATAACCACCCTCCCAGAGTTTC...GCCAGGCCTCCTCTCGTACCTTGGACAAAGGATACACCTGAACCAGAATAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp ATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCGGAAGCGCCTTTCCCTaGCGCCCGAAGAACAGAAAT +
Preference number: 4 (lower is better)
Translates to: ILLSLPWFLYPRREAMRSGSAFP*RPKNRN
Trigger: ATTTCTGTTCTTCGGGCGCCAGGGAAAGGCGCTTCC...GCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR TCA 90 bp TTCCCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGGTGGTGGCTCCTGTaGGGGAGGAAAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FPLISAASFTFYFRCHGFWWWLL*GRKGSW
Trigger: CCAGCTGCCTTTCCTCCCTCACAGGAGCCACCACCA...GAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR TCA 90 bp TTTCTTTGTTTGTCTTTCCTCAAATATACAGTCCATCACCTTGGCTCAGTGCATGCCCACCAGCGCTGCTaGGAGGGGAGAGGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: FLCLSFLKYTVHHLGSVHAHQRC*EGRGGL
Trigger: GAGACCACCTCTCCCCTCTCAGCAGCGCTGGTGGGC...ATGCACTGAGCCAAGGTGATGGACTGTATATTTGAGGAAAGACAAACAAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp TCCTTGGTGCATGACTTAGGAAAAACCAGTGGCAATGATGGAGCTGTGCCCTGTAAAAACCAGTGGCAATaGTGGAGCTGTGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SLVHDLGKTSGNDGAVPCKNQWQ*WSCALW
Trigger: CCACAGGGCACAGCTCCATCATTGCCACTGGTTTTT...ACAGGGCACAGCTCCATCATTGCCACTGGTTTTTCCTAAGTCATGCACCAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp ACCAGATTTGACATTTCCTTACCGAACTTCCTTTCCCAGCAAGAATCCTATTTGTGCCGCCACCAAGACTaGCAGCTCCCACCCACCTCG +
Preference number: 4 (lower is better)
Translates to: TRFDISLPNFLSQQESYLCRHQD*QLPPTS
Trigger: CGAGGTGGGTGGGAGCTGGCAGTCTTGGTGGCGGCA...CAAATAGGATTCTTGCTGGGAAAGGAAGTTCGGTAAGGAAATGTCAAATCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp CCCTGTGGCACCTATAAGGCAAAGCCCACTGAGGGACTTAGGGGTGGGGAAATGCACTATCATGATTACTaGTGCCATCAAAACCAGGCT +
Preference number: 4 (lower is better)
Translates to: PCGTYKAKPTEGLRGGEMHYHDY*CHQNQA
Trigger: AGCCTGGTTTTGATGGCAGCAGTAATCATGATAGTG...CATTTCCCCACCCCTAAGTCCCTCAGTGGGCTTTGCCTTATAGGTGCCACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp TATCCTTTGTCCAAGGTACGAGAGGAGGCCTGGCGGTCACATCAACAGCGAGTGAAGTGGCTGCTTCATTaGAGGGTTGGACCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: YPLSKVREEAWRSHQQRVKWLLH*RVGPCL
Trigger: TAAACAAGGTCCAACCCTGCAATGAAGCAGCCACTT...CACTCGCTGTTGATGTGACCGCCAGGCCTCCTCTCGTACCTTGGACAAAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp CAGCTAATGTCTAGCAAAAACATCACCAGGGTACCTTCCCCAAACAGGCCTCATGTCACCGGCAGTCTGTaGTTTCTGGTTGAGGGACTC +
Preference number: 4 (lower is better)
Translates to: QLMSSKNITRVPSPNRPHVTGSL*FLVEGL
Trigger: GAGTCCCTCAACCAGAAACCACAGACTGCCGGTGAC...ATGAGGCCTGTTTGGGGAAGGTACCCTGGTGATGTTTTTGCTAGACATTAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp ATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCATATGGGGCTCTCTTaGGCCCCACCATATGTGATG +
Preference number: 4 (lower is better)
Translates to: ILLSLPWFLYPRREAMRSHMGLS*APPYVM
Trigger: CATCACATATGGTGGGGCCCAAGAGAGCCCCATATG...GCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp GGAAAAACCAGTGGCAATGATGGAGCTGTGCCCTGTGGCACCTATAAGGCAAAGCCACCTATTCCCACATaGTTCTTCCTGGTATCAGGC +
Preference number: 4 (lower is better)
Translates to: GKTSGNDGAVPCGTYKAKPPIPT*FFLVSG
Trigger: GCCTGATACCAGGAAGAACCATGTGGGAATAGGTGG...CTTTGCCTTATAGGTGCCACAGGGCACAGCTCCATCATTGCCACTGGTTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp CAGCTAATGTCTAGCAAAAACATCACCAGGGTACCTTCCCCAAACAGGCCTCATGTCTGGGGAGGAGAGTaGCAACAGTTAGCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: QLMSSKNITRVPSPNRPHVWGGE*QQLARH
Trigger: ATGCCGAGCTAACTGTTGCCACTCTCCTCCCCAGAC...ATGAGGCCTGTTTGGGGAAGGTACCCTGGTGATGTTTTTGCTAGACATTAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp TTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTCCGCCCTACTTTCGTTGCCATaGTTTCTGTATCCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: FRCHGFCILGERRCGASALLSLP*FLYPRR
Trigger: TCTCCTAGGATACAGAAACCATGGCAACGAAAGTAG...GGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CCA 90 bp AGTAAGGCTTTGGAAGACGGCGGGCGCAATGACACACCCACCGCCACAGGAAAACTACTTTCGTTGCCATaGTTTCTGTATCCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: SKALEDGGRNDTPTATGKLLSLP*FLYPRR
Trigger: TCTCCTAGGATACAGAAACCATGGCAACGAAAGTAG...TTTTCCTGTGGCGGTGGGTGTGTCATTGCGCCCGCCGTCTTCCAAAGCCTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGCCTTCCCTTCTGTaGGCAGGGGGCTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: DICCEFYILLSLPWFLYPRPSLL*AGGWRA
Trigger: AGCCCTCCAGCCCCCTGCCCACAGAAGGGAAGGCCT...AGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp AATACAGCTTCCAGAGGATCCTTTAGGATCTATGTTCTTATTGCACATGGCTCAAGGCCTTCCCTTCTGTaGGCAGGGGGCTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: NTASRGSFRIYVLIAHGSRPSLL*AGGWRA
Trigger: AGCCCTCCAGCCCCCTGCCCACAGAAGGGAAGGCCT...TGAGCCATGTGCAATAAGAACATAGATCCTAAAGGATCCTCTGGAAGCTGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTGAGCGGGTAAGAAAACTATTCTaGTTCAGGTGTATCCTTTGT +
Preference number: 4 (lower is better)
Translates to: GACYQQLSFPLHPSCAERVRKLF*FRCILC
Trigger: ACAAAGGATACACCTGAACCAGAATAGTTTTCTTAC...CCGCTCAGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp TGGGTGAGAGAGAGGGCAGCTGTGCAGCGTTCGGCCTCCAATTCCATTTTAATTTGTTCTTATTGCACATaGCTCAGCCCGTCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: WVRERAAVQRSASNSILICSYCT*LSPSRD
Trigger: GTCCCTAGACGGGCTGAGCCATGTGCAATAAGAACA...AATTAAAATGGAATTGGAGGCCGAACGCTGCACAGCTGCCCTCTCTCTCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GCTCCTCTCCAGGTTAACCATAATCCTGAGGCCTTCGCGGGTTCACACTATCATTGTTCTTATTGCACATaGCTCAGCCCGTCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: APLQVNHNPEAFAGSHYHCSYCT*LSPSRD
Trigger: GTCCCTAGACGGGCTGAGCCATGTGCAATAAGAACA...ATGATAGTGTGAACCCGCGAAGGCCTCAGGATTATGGTTAACCTGGAGAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp TGGGTGAGAGAGAGGGCAGCTGTGCAGCGTTCGGCCTCCAATTCCATTTTAATTAGGGATTTCATAGTTTaGACCTCGGTGGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: WVRERAAVQRSASNSILIRDFIV*TSVVWL
Trigger: CAGCCACACCACCGAGGTCCAAACTATGAAATCCCT...AATTAAAATGGAATTGGAGGCCGAACGCTGCACAGCTGCCCTCTCTCTCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394903.6
CDS-3UTR TCA 90 bp AATACAGCTTCCAGAGGATCCTTTAGGATCTATGTTCTTATTGCACATGGCTCATGGTGGTGGCTCCTGTaGGGGAGGAAAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: NTASRGSFRIYVLIAHGSWWWLL*GRKGSW
Trigger: CCAGCTGCCTTTCCTCCCTCACAGGAGCCACCACCA...TGAGCCATGTGCAATAAGAACATAGATCCTAAAGGATCCTCTGGAAGCTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp TGTTTAAAAACCAGATTTGACATTTCCTTACCGAACTTCCTTTCCCAGCAAGAAAGACGGCGGGCGCAATaGCACACCCACCGCCACAGG +
Preference number: 4 (lower is better)
Translates to: CLKTRFDISLPNFLSQQERRRAQ*HTHRHR
Trigger: CCTGTGGCGGTGGGTGTGTCATTGCGCCCGCCGTCT...TTCTTGCTGGGAAAGGAAGTTCGGTAAGGAAATGTCAAATCTGGTTTTTAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp TACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGCCGAACTGGTCATACTaGTTCCTCTTCTCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: YILLSLPWFLYPRREAMRPNWSY*FLFSGL
Trigger: CAACCCGGAGAAGAGGAAGCAGTATGACCAGTTCGG...CCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR GCA 90 bp TTTCTTTGTTTGTCTTTCCTCAAATATACAGTCCATCACCTTGGCTCAGTGCATTTGCCACTGCACCGCTaGACCGTGCTGCCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: FLCLSFLKYTVHHLGSVHLPLHR*TVLPAR
Trigger: TCGAGCGGGCAGCACGGTGCAGCGGTGCAGTGGCAA...ATGCACTGAGCCAAGGTGATGGACTGTATATTTGAGGAAAGACAAACAAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR GCA 90 bp TGGGTGAGAGAGAGGGCAGCTGTGCAGCGTTCGGCCTCCAATTCCATTTTAATTCCCACTGGCGGCAAGTaGTGTTTTAAGCAAAATCCT +
Preference number: 4 (lower is better)
Translates to: WVRERAAVQRSASNSILIPTGGK*CFKQNP
Trigger: AGGATTTTGCTTAAAACAGCACTTGCCGCCAGTGGG...AATTAAAATGGAATTGGAGGCCGAACGCTGCACAGCTGCCCTCTCTCTCACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp TTCCCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTCTCTGACAGTCGGCTaGAGCTGGGGGTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: FPLISAASFTFYFRCHGFSLTVG*SWGCPS
Trigger: AGATGGGCACCCCCAGCTGCAGCCGACTGTCAGAGA...GAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR CCA 90 bp TTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCAGTTTTGAGCGAGGGTaGAAGTGCTACCGTATGTCT +
Preference number: 4 (lower is better)
Translates to: FYFRCHGFCILGERRCGASFERG*KCYRMS
Trigger: AGACATACGGTAGCACTTCCACCCTCGCTCAAAACT...GGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GGGGCTGTGAAAAGCTCTGATGCGACTCTCCTTATGCTGTCAGCTACAGCTAATGCAGTCTGTGGTTTCTaGTTGAGGGACTCAATCAGG +
Preference number: 4 (lower is better)
Translates to: GAVKSSDATLLMLSATANAVCGF*LRDSIR
Trigger: CCTGATTGAGTCCCTCAACCAGAAACCACAGACTGC...ATTAGCTGTAGCTGACAGCATAAGGAGAGTCGCATCAGAGCTTTTCACAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp ATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCGCTTTCTGCATTTACTaGGTGAGAGAGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ILLSLPWFLYPRREAMRSAFCIY*VRERAA
Trigger: AGCTGCCCTCTCTCTCACCCAGTAAATGCAGAAAGC...GCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CCA 90 bp CCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTGCTTCTCCTGAGAGGTaGCTGGTGGTGGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: PLISAASFTFYFRCHGFCASPER*LVVAPV
Trigger: CACAGGAGCCACCACCAGCCACCTCTCAGGAGAAGC...ACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CCA 90 bp TCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTTGGAAGACGGCGGGCGCAATGACGTAAGAAAACTATTCTaGTTCAGGTGTATCCTTTGT +
Preference number: 4 (lower is better)
Translates to: SWLAAWGSKALEDGGRNDVRKLF*FRCILC
Trigger: ACAAAGGATACACCTGAACCAGAATAGTTTTCTTAC...GTCATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp CTCCCTCCTCCCACTGGCGGCAAGTGCTGTTTTAAGCAAAATCCTCATTTCAATTTATCACCTCCTGGCTaGCAGCTTGGGGAAGTAAGG +
Preference number: 4 (lower is better)
Translates to: LPPPTGGKCCFKQNPHFNLSPPG*QLGEVR
Trigger: CCTTACTTCCCCAAGCTGCCAGCCAGGAGGTGATAA...ATTGAAATGAGGATTTTGCTTAAAACAGCACTTGCCGCCAGTGGGAGGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp TTTCTTTGTTTGTCTTTCCTCAAATATACAGTCCATCACCTTGGCTCAGTGCATCGGGCGATGGAGGACTaGCGGTGGCTGAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: FLCLSFLKYTVHHLGSVHRAMED*RWLRSA
Trigger: TGCTGACCTCAGCCACCGCCAGTCCTCCATCGCCCG...ATGCACTGAGCCAAGGTGATGGACTGTATATTTGAGGAAAGACAAACAAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR CCA 90 bp CGCATCTATAAATTACATTCTATGGAGAGTTCTCTTTCTTCCTCCTATCTTTGGGCCTCGGCGTCCACATaGCTGACCGCCGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: RIYKLHSMESSLSSSYLWASAST*LTAAGL
Trigger: GAGTCCAGCGGCGGTCAGCCATGTGGACGCCGAGGC...CCAAAGATAGGAGGAAGAAAGAGAACTCTCCATAGAATGTAATTTATAGATGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
3UTR CAA 72 bp GAGGGTAAGAAAACTATTCTGGTTCAGGTGTATCCTTaGTCCAAGGTACGAGAGGAGGCCTGGCGGTCACAT +
Preference number: 4 (lower is better)
Translates to: EGKKTILVQVYP*SKVREEAWRSH
Trigger: ATGTGACCGCCAGGCCTCCTCTCGTACCTTGGACAAAGGATACACCTGAACCAGAATAGTTTTCTTACCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
CDS-3UTR TCA 90 bp GATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAAGGGCCGTGCTGACTaGTGGCTGGAGTGGACCAAG +
Preference number: 4 (lower is better)
Translates to: DICCEFYILLSLPWFLYPKGRAD*WLEWTK
Trigger: CTTGGTCCACTCCAGCCATCAGTCAGCACGGCCCTT...AGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp AAATCCTCATTTCAATGTGAGGGTAAGAAAACTATTCTGGTTCAGGTGTATCCTAGCAGGCCCCACAGCTaGTCGGTCTCTGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KSSFQCEGKKTILVQVYPSRPHS*SVSGGW
Trigger: CCAGCCTCCAGAGACCGAGCAGCTGTGGGGCCTGCT...AGGATACACCTGAACCAGAATAGTTTTCTTACCCTCACATTGAAATGAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp CCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTCGGCATTCGAGAGAGTaGCTCAGATCCCACCAGAGG +
Preference number: 4 (lower is better)
Translates to: PLISAASFTFYFRCHGFCRHSRE*LRSHQR
Trigger: CCTCTGGTGGGATCTGAGGCACTCTCTCGAATGCCG...ACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp GCTCCTCTCCAGGTTAACCATAATCCTGAGGCCTTCGCGGGTTCACACTATCATTATCATGATTACTGCTaGCATCAAAACCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: APLQVNHNPEAFAGSHYHYHDYC*HQNQAG
Trigger: CCCAGCCTGGTTTTGATGGCAGCAGTAATCATGATA...ATGATAGTGTGAACCCGCGAAGGCCTCAGGATTATGGTTAACCTGGAGAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp TCCTTGGTGCATGACTTAGGAAAAACCAGTGGCAATGATGGAGCTGTGCCCTGTCCCACTGGCGGCAAGTaGTGTTTTAAGCAAAATCCT +
Preference number: 4 (lower is better)
Translates to: SLVHDLGKTSGNDGAVPCPTGGK*CFKQNP
Trigger: AGGATTTTGCTTAAAACAGCACTTGCCGCCAGTGGG...ACAGGGCACAGCTCCATCATTGCCACTGGTTTTTCCTAAGTCATGCACCAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp CACGCATCTATAAATTACATTCTATGGAGAGTTCTCTTTCTTCCTCCTATCTTTCCGCCGCTGGACTCTTaGGGGCGATGGAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: HASINYILWRVLFLPPIFPPLDS*GRWRTG
Trigger: GCCAGTCCTCCATCGCCCGCAAGAGTCCAGCGGCGG...AAAGATAGGAGGAAGAAAGAGAACTCTCCATAGAATGTAATTTATAGATGCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR CCA 90 bp TCCTTGGTGCATGACTTAGGAAAAACCAGTGGCAATGATGGAGCTGTGCCCTGTAGTTTTGAGCGAGGGTaGAAGTGCTACCGTATGTCT +
Preference number: 4 (lower is better)
Translates to: SLVHDLGKTSGNDGAVPCSFERG*KCYRMS
Trigger: AGACATACGGTAGCACTTCCACCCTCGCTCAAAACT...ACAGGGCACAGCTCCATCATTGCCACTGGTTTTTCCTAAGTCATGCACCAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp CACGCATCTATAAATTACATTCTATGGAGAGTTCTCTTTCTTCCTCCTATCTTTAAATCCCCATGCCCATaGCCGTGCCGGGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: HASINYILWRVLFLPPIFKSPCP*PCRAAW
Trigger: CCAGGCGGCCCGGCACGGCCATGGGCATGGGGATTT...AAAGATAGGAGGAAGAAAGAGAACTCTCCATAGAATGTAATTTATAGATGCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CCA 90 bp CGCATCTATAAATTACATTCTATGGAGAGTTCTCTTTCTTCCTCCTATCTTTGGAGCCCGCCATCACCCTaGTTGTCCCTGCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RIYKLHSMESSLSSSYLWSPPSP*LSLRSC
Trigger: GCAGGACCGCAGGGACAACCAGGGTGATGGCGGGCT...CCAAAGATAGGAGGAAGAAAGAGAACTCTCCATAGAATGTAATTTATAGATGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CCA 90 bp TCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGACCAAGAAGCCCCGGGTaGCCCTCAGCAACAGTTTCA +
Preference number: 4 (lower is better)
Translates to: SAASFTFYFRCHGFCILGPRSPG*PSATVS
Trigger: TGAAACTGTTGCTGAGGGCCACCCGGGGCTTCTTGG...TCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CCA 90 bp TACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGGCTTTCTGCATTTACTaGGTGAGAGAGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: YILLSLPWFLYPRREAMRAFCIY*VRERAA
Trigger: AGCTGCCCTCTCTCTCACCCAGTAAATGCAGAAAGC...CCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR TCA 90 bp CCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTTCTGTGGTTTCTGGTTaGGGGACTCAATCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: PLISAASFTFYFRCHGFCSVVSG*GTQSGR
Trigger: GCGCCCTGATTGAGTCCCTCAACCAGAAACCACAGA...ACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp TTTCTTTGTTTGTCTTTCCTCAAATATACAGTCCATCACCTTGGCTCAGTGCATGAGAAAGGGCCGTGCTaGCTGATGGCTGGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: FLCLSFLKYTVHHLGSVHEKGPC*LMAGVD
Trigger: GTCCACTCCAGCCATCAGTCAGCACGGCCCTTTCTC...ATGCACTGAGCCAAGGTGATGGACTGTATATTTGAGGAAAGACAAACAAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR TCA 90 bp GATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTGGGCCCCACCATATGTaGTGGCCTAAATACCAGGGC +
Preference number: 4 (lower is better)
Translates to: DICCEFYILLSLPWFLYPGPHHM*WPKYQG
Trigger: GCCCTGGTATTTAGGCCATCACATATGGTGGGGCCC...AGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR TCA 90 bp AATACAGCTTCCAGAGGATCCTTTAGGATCTATGTTCTTATTGCACATGGCTCACCCGGCACCACTGACTaGCTCGGAGGAAGAACTTTC +
Preference number: 4 (lower is better)
Translates to: NTASRGSFRIYVLIAHGSPGTTD*LGGRTF
Trigger: GAAAGTTCTTCCTCCGAGTCAGTCAGTGGTGCCGGG...TGAGCCATGTGCAATAAGAACATAGATCCTAAAGGATCCTCTGGAAGCTGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp TCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAAAGGGTTCCCGGGTaGAGCGAGGTGATGAGTTGT +
Preference number: 4 (lower is better)
Translates to: SAASFTFYFRCHGFCILGERVPG*SEVMSC
Trigger: ACAACTCATCACCTCGCTTCACCCGGGAACCCTTTC...TCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR TCA 90 bp TTCCCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCGGCCGGTTAGGAGGCTaGCTGCTGTTCCTCAATTTC +
Preference number: 4 (lower is better)
Translates to: FPLISAASFTFYFRCHGFGRLGG*LLFLNF
Trigger: GAAATTGAGGAACAGCAGTCAGCCTCCTAACCGGCC...GAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR GCA 90 bp GATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGCGCATGCGGCCGTTaGTGTAGACGTGGACGTTAC +
Preference number: 4 (lower is better)
Translates to: DICCEFYILLSLPWFLYPSACGR*CRRGRY
Trigger: GTAACGTCCACGTCTACAGCAACGGCCGCATGCGCT...AGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR GCA 90 bp TCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAATCAGGCAGGCAGTGTaGATATGGGGCTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SAASFTFYFRCHGFCILGIRQAV*IWGSLG
Trigger: CCCAAGAGAGCCCCATATGCACACTGCCTGCCTGAT...TCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp TCCTTGGTGCATGACTTAGGAAAAACCAGTGGCAATGATGGAGCTGTGCCCTGTAAGTGGCTGCTTCATTaGAGGGTTGGACCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: SLVHDLGKTSGNDGAVPCKWLLH*RVGPCL
Trigger: TAAACAAGGTCCAACCCTGCAATGAAGCAGCCACTT...ACAGGGCACAGCTCCATCATTGCCACTGGTTTTTCCTAAGTCATGCACCAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp CCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTGGCCAAAGATCAACCTaGAAGAGTCCGGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PLISAASFTFYFRCHGFCGQRST*KSPEGG
Trigger: TCCTCCCTCCGGACTCTTGCAGGTTGATCTTTGGCC...ACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR CCA 90 bp TTTCTTTGTTTGTCTTTCCTCAAATATACAGTCCATCACCTTGGCTCAGTGCATTGGACCTCGGTGGTGTaGCTGGCCCAGGACTATCCA +
Preference number: 4 (lower is better)
Translates to: FLCLSFLKYTVHHLGSVHWTSVV*LAQDYP
Trigger: TGGATAGTCCTGGGCCAGCCACACCACCGAGGTCCA...ATGCACTGAGCCAAGGTGATGGACTGTATATTTGAGGAAAGACAAACAAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000463786.2
CDS-3UTR CCA 90 bp TTTCTTTGTTTGTCTTTCCTCAAATATACAGTCCATCACCTTGGCTCAGTGCATGGCTGGAGGTCAGGCTaGGGACAGGAGTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: FLCLSFLKYTVHHLGSVHGWRSG*GQESLP
Trigger: TGGCAAAGACTCCTGTCCCCAGCCTGACCTCCAGCC...ATGCACTGAGCCAAGGTGATGGACTGTATATTTGAGGAAAGACAAACAAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp CACGCATCTATAAATTACATTCTATGGAGAGTTCTCTTTCTTCCTCCTATCTTTGGGCTGGAGGGCTCCTaGGCACCAGGACAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: HASINYILWRVLFLPPIFGLEGS*APGQRA
Trigger: GGCTCTTTGTCCTGGTGCCCAGGAGCCCTCCAGCCC...AAAGATAGGAGGAAGAAAGAGAACTCTCCATAGAATGTAATTTATAGATGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp ACCAGATTTGACATTTCCTTACCGAACTTCCTTTCCCAGCAAGAATCCTATTTGTGGTTAGGTAGATCCTaGCCCCCTCTGCAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: TRFDISLPNFLSQQESYLWLGRS*PPLQAF
Trigger: GAAGGCCTGCAGAGGGGGCCAGGATCTACCTAACCA...CAAATAGGATTCTTGCTGGGAAAGGAAGTTCGGTAAGGAAATGTCAAATCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp AATACAGCTTCCAGAGGATCCTTTAGGATCTATGTTCTTATTGCACATGGCTCAGGGGAAGTAAGGCTTTaGAAGACGGCGGGCGCAATG +
Preference number: 4 (lower is better)
Translates to: NTASRGSFRIYVLIAHGSGEVRL*KTAGAM
Trigger: CATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCC...TGAGCCATGTGCAATAAGAACATAGATCCTAAAGGATCCTCTGGAAGCTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp TTCCCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCGTGGTTATCACCTCCTaGCTGGCAGCTTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: FPLISAASFTFYFRCHGFVVITS*LAAWGS
Trigger: ACTTCCCCAAGCTGCCAGCCAGGAGGTGATAACCAC...GAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp TGTTTAAAAACCAGATTTGACATTTCCTTACCGAACTTCCTTTCCCAGCAAGAAGAGAAAGGGCCGTGCTaGCTGATGGCTGGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: CLKTRFDISLPNFLSQQEEKGPC*LMAGVD
Trigger: GTCCACTCCAGCCATCAGTCAGCACGGCCCTTTCTC...TTCTTGCTGGGAAAGGAAGTTCGGTAAGGAAATGTCAAATCTGGTTTTTAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp AAATCCTCATTTCAATGTGAGGGTAAGAAAACTATTCTGGTTCAGGTGTATCCTCACCCTGGTTGTCCCTaGGGTCCTGCCTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: KSSFQCEGKKTILVQVYPHPGCP*GPAFAG
Trigger: ACCAGCAAAGGCAGGACCGCAGGGACAACCAGGGTG...AGGATACACCTGAACCAGAATAGTTTTCTTACCCTCACATTGAAATGAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp CGCATCTATAAATTACATTCTATGGAGAGTTCTCTTTCTTCCTCCTATCTTTGGGACCAGGGCCAAAGCTaGCAGGAGTTGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RIYKLHSMESSLSSSYLWDQGQS*QELQGG
Trigger: TCCACCCTGCAACTCCTGGCAGCTTTGGCCCTGGTC...CCAAAGATAGGAGGAAGAAAGAGAACTCTCCATAGAATGTAATTTATAGATGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR GCA 90 bp CAGCTAATGTCTAGCAAAAACATCACCAGGGTACCTTCCCCAAACAGGCCTCATGTCCTAAGAGCTTTCTaGATTTACTGGGTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: QLMSSKNITRVPSPNRPHVLRAF*IYWVRE
Trigger: CTCTCTCACCCAGTAAATGCAGAAAGCTCTTAGGAC...ATGAGGCCTGTTTGGGGAAGGTACCCTGGTGATGTTTTTGCTAGACATTAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp TACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGATGCGACTCTCCTTATaGTGTCAGCTACAGCTAATG +
Preference number: 4 (lower is better)
Translates to: YILLSLPWFLYPRREAMRMRLSL*CQLQLM
Trigger: CATTAGCTGTAGCTGACAGCATAAGGAGAGTCGCAT...CCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp TTTCTTTGTTTGTCTTTCCTCAAATATACAGTCCATCACCTTGGCTCAGTGCATCCAAGAAGCCCCGGGTaGCCCTCAGCAACAGTTTCA +
Preference number: 4 (lower is better)
Translates to: FLCLSFLKYTVHHLGSVHPRSPG*PSATVS
Trigger: TGAAACTGTTGCTGAGGGCCACCCGGGGCTTCTTGG...ATGCACTGAGCCAAGGTGATGGACTGTATATTTGAGGAAAGACAAACAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CCA 90 bp ATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTACTTTCGTTGCCATaGTTTCTGTATCCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: ILLSLPWFLYPRREAMRSLLSLP*FLYPRR
Trigger: TCTCCTAGGATACAGAAACCATGGCAACGAAAGTAG...GCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CCA 90 bp CCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTCTAGCTGTGTCATCCTaGGCATCCCTTACCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PLISAASFTFYFRCHGFCLAVSS*ASLTSE
Trigger: CTCTGAGGTAAGGGATGCCCAGGATGACACAGCTAG...ACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR TCA 90 bp TTTCTTTGTTTGTCTTTCCTCAAATATACAGTCCATCACCTTGGCTCAGTGCATTCTGTGGTTTCTGGTTaGGGGACTCAATCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: FLCLSFLKYTVHHLGSVHSVVSG*GTQSGR
Trigger: GCGCCCTGATTGAGTCCCTCAACCAGAAACCACAGA...ATGCACTGAGCCAAGGTGATGGACTGTATATTTGAGGAAAGACAAACAAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp ACCAGATTTGACATTTCCTTACCGAACTTCCTTTCCCAGCAAGAATCCTATTTGCCCAGCCCTTCCCACTaGTATCTGCTGCGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: TRFDISLPNFLSQQESYLPSPSH*YLLRVL
Trigger: TAAAACTCGCAGCAGATATCAGTGGGAAGGGCTGGG...CAAATAGGATTCTTGCTGGGAAAGGAAGTTCGGTAAGGAAATGTCAAATCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp TTCCCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCAAGCCTTCCTTCTGCTaGTTCTCCTTCCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: FPLISAASFTFYFRCHGFKPSFC*FSFQQL
Trigger: CAACTGCTGGAAGGAGAAGCAGCAGAAGGAAGGCTT...GAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR GCA 90 bp GCTCCTCTCCAGGTTAACCATAATCCTGAGGCCTTCGCGGGTTCACACTATCATACATTCTACTTTCGTTaGCATGGTTTCTGTATCCTA +
Preference number: 4 (lower is better)
Translates to: APLQVNHNPEAFAGSHYHTFYFR*HGFCIL
Trigger: TAGGATACAGAAACCATGGCAACGAAAGTAGAATGT...ATGATAGTGTGAACCCGCGAAGGCCTCAGGATTATGGTTAACCTGGAGAGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp ACCAGATTTGACATTTCCTTACCGAACTTCCTTTCCCAGCAAGAATCCTATTTGGCAATGATGGAGCTGTaGCCTGTGGCACCTATAAGG +
Preference number: 4 (lower is better)
Translates to: TRFDISLPNFLSQQESYLAMMEL*PVAPIR
Trigger: CCTTATAGGTGCCACAGGGCACAGCTCCATCATTGC...CAAATAGGATTCTTGCTGGGAAAGGAAGTTCGGTAAGGAAATGTCAAATCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp AATACAGCTTCCAGAGGATCCTTTAGGATCTATGTTCTTATTGCACATGGCTCACCTTGTTGGATTCCATaGCGGAACCAGAACGCGGAA +
Preference number: 4 (lower is better)
Translates to: NTASRGSFRIYVLIAHGSPCWIP*RNQNAE
Trigger: TTCCGCGTTCTGGTTCCGCCATGGAATCCAACAAGG...TGAGCCATGTGCAATAAGAACATAGATCCTAAAGGATCCTCTGGAAGCTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp CCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTGCAGTCTGTGGTTTCTaGTTGAGGGACTCAATCAGG +
Preference number: 4 (lower is better)
Translates to: PLISAASFTFYFRCHGFCAVCGF*LRDSIR
Trigger: CCTGATTGAGTCCCTCAACCAGAAACCACAGACTGC...ACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp GATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTTCCTGGCTGGCAGCTTaGGGAAGTAAGGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: DICCEFYILLSLPWFLYPSWLAA*GSKALE
Trigger: TTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGA...AGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp TTCCCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCATAATCTCTCTGGGCTaGAGTGGCTGCTTCATTGCA +
Preference number: 4 (lower is better)
Translates to: FPLISAASFTFYFRCHGFIISLG*SGCFIA
Trigger: TGCAATGAAGCAGCCACTTCAGCCCAGAGAGATTAT...GAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp TGTTTAAAAACCAGATTTGACATTTCCTTACCGAACTTCCTTTCCCAGCAAGAAGTCACCGGCAGTCTGTaGTTTCTGGTTGAGGGACTC +
Preference number: 4 (lower is better)
Translates to: CLKTRFDISLPNFLSQQEVTGSL*FLVEGL
Trigger: GAGTCCCTCAACCAGAAACCACAGACTGCCGGTGAC...TTCTTGCTGGGAAAGGAAGTTCGGTAAGGAAATGTCAAATCTGGTTTTTAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp TACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAACTGCAAAGCCCTATaGGTATTATTGCCAATCACA +
Preference number: 4 (lower is better)
Translates to: YILLSLPWFLYPRREAMRNCKAL*VLLPIT
Trigger: TGTGATTGGCAATAATACCCATAGGGCTTTGCAGTT...CCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
3UTR CAA 72 bp ACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTaGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATG +
Preference number: 4 (lower is better)
Translates to: TDICCEFYILLS*PWFLYPRREAM
Trigger: CATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000444643.7
ENST00000461919.5
CDS-3UTR TCA 90 bp AAATCCTCATTTCAATGTGAGGGTAAGAAAACTATTCTGGTTCAGGTGTATCCTCCCAGCCCTTCCCACTaGTATCTGCTGCGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: KSSFQCEGKKTILVQVYPPSPSH*YLLRVL
Trigger: TAAAACTCGCAGCAGATATCAGTGGGAAGGGCTGGG...AGGATACACCTGAACCAGAATAGTTTTCTTACCCTCACATTGAAATGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp TGTTTAAAAACCAGATTTGACATTTCCTTACCGAACTTCCTTTCCCAGCAAGAAAGCAAGCCTTCCTTCTaGTGCTTCTCCTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CLKTRFDISLPNFLSQQESKPSF*CFSFQQ
Trigger: CTGCTGGAAGGAGAAGCAGCAGAAGGAAGGCTTGCT...TTCTTGCTGGGAAAGGAAGTTCGGTAAGGAAATGTCAAATCTGGTTTTTAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp CGCATCTATAAATTACATTCTATGGAGAGTTCTCTTTCTTCCTCCTATCTTTGGAGCAAGCCTTCCTTCTaGTGCTTCTCCTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RIYKLHSMESSLSSSYLWSKPSF*CFSFQQ
Trigger: CTGCTGGAAGGAGAAGCAGCAGAAGGAAGGCTTGCT...CCAAAGATAGGAGGAAGAAAGAGAACTCTCCATAGAATGTAATTTATAGATGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR GCA 90 bp TTCCCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCGTCCTAAGAGCTTTCTaGATTTACTGGGTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: FPLISAASFTFYFRCHGFVLRAF*IYWVRE
Trigger: CTCTCTCACCCAGTAAATGCAGAAAGCTCTTAGGAC...GAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR GCA 90 bp ACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAACATTCTACTTTCGTTaGCATGGTTTCTGTATCCTA +
Preference number: 4 (lower is better)
Translates to: TFYFRCHGFCILGERRCGTFYFR*HGFCIL
Trigger: TAGGATACAGAAACCATGGCAACGAAAGTAGAATGT...TCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR GCA 90 bp TTCCCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCGATCTATGTTCTTATTaGACATGGCTCAGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: FPLISAASFTFYFRCHGFDLCSY*TWLSPS
Trigger: AGACGGGCTGAGCCATGTGCAATAAGAACATAGATC...GAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CCA 90 bp CACGCATCTATAAATTACATTCTATGGAGAGTTCTCTTTCTTCCTCCTATCTTTCTCTGCATCCCTGACTaGCAGGCTCAAGTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HASINYILWRVLFLPPIFLCIPD*QAQVRR
Trigger: CCTTCTCACTTGAGCCTGCCAGTCAGGGATGCAGAG...AAAGATAGGAGGAAGAAAGAGAACTCTCCATAGAATGTAATTTATAGATGCGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR TCA 90 bp TTTCTTTGTTTGTCTTTCCTCAAATATACAGTCCATCACCTTGGCTCAGTGCATATAATCTCTCTGGGCTaGAGTGGCTGCTTCATTGCA +
Preference number: 4 (lower is better)
Translates to: FLCLSFLKYTVHHLGSVHIISLG*SGCFIA
Trigger: TGCAATGAAGCAGCCACTTCAGCCCAGAGAGATTAT...ATGCACTGAGCCAAGGTGATGGACTGTATATTTGAGGAAAGACAAACAAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR TCA 90 bp TTTCTTTGTTTGTCTTTCCTCAAATATACAGTCCATCACCTTGGCTCAGTGCATAATCTTTACATTGCTTaGCCCTCAGGTGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: FLCLSFLKYTVHHLGSVHNLYIA*PSGVLA
Trigger: TGCCAGGACACCTGAGGGTCAAGCAATGTAAAGATT...ATGCACTGAGCCAAGGTGATGGACTGTATATTTGAGGAAAGACAAACAAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR GCA 90 bp CACGCATCTATAAATTACATTCTATGGAGAGTTCTCTTTCTTCCTCCTATCTTTCCGAACTGGTCATACTaGTTCCTCTTCTCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: HASINYILWRVLFLPPIFPNWSY*FLFSGL
Trigger: CAACCCGGAGAAGAGGAAGCAGTATGACCAGTTCGG...AAAGATAGGAGGAAGAAAGAGAACTCTCCATAGAATGTAATTTATAGATGCGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CCA 90 bp CACGCATCTATAAATTACATTCTATGGAGAGTTCTCTTTCTTCCTCCTATCTTTTTAGGGGTGGGGAAATaGTTAGGTAGATCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: HASINYILWRVLFLPPIFLGVGK*LGRSWP
Trigger: GGGCCAGGATCTACCTAACCATTTCCCCACCCCTAA...AAAGATAGGAGGAAGAAAGAGAACTCTCCATAGAATGTAATTTATAGATGCGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR GCA 90 bp TTCCCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCCCCACTGATATCTGCTaGGAGTTTTACATTCTACTT +
Preference number: 4 (lower is better)
Translates to: FPLISAASFTFYFRCHGFPTDIC*EFYILL
Trigger: AAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGG...GAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CCA 90 bp TTTCTTTGTTTGTCTTTCCTCAAATATACAGTCCATCACCTTGGCTCAGTGCATCTCTCCCCTCTAGCGTaGATTAAGAAAAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: FLCLSFLKYTVHHLGSVHLSPLA*IKKNSL
Trigger: CAAGGAGTTTTTCTTAATCCACGCTAGAGGGGAGAG...ATGCACTGAGCCAAGGTGATGGACTGTATATTTGAGGAAAGACAAACAAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR CCA 90 bp CACGCATCTATAAATTACATTCTATGGAGAGTTCTCTTTCTTCCTCCTATCTTTGCTTCATTGCAGGGTTaGACCTTGTTTAAAAACCAG +
Preference number: 4 (lower is better)
Translates to: HASINYILWRVLFLPPIFASLQG*TLFKNQ
Trigger: CTGGTTTTTAAACAAGGTCCAACCCTGCAATGAAGC...AAAGATAGGAGGAAGAAAGAGAACTCTCCATAGAATGTAATTTATAGATGCGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS CCA 90 bp TCCACATGGCTGACCGCCGCTGGACTCTTGCGGGCGATGGAGGACTaGCGGTGGCTGAGGTCAGCACCTCCCACCAGGCCACCCGCTCCG +
Preference number: 5 (lower is better)
Translates to: STWLTAAGLLRAMED*RWLRSAPPTRPPAP
Trigger: CGGAGCGGGTGGCCTGGTGGGAGGTGCTGACCTCAGCCACCGCCAGTCCTCCATCGCCCGCAAGAGTCCAGCGGCGGTCAGCCATGTGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS TCA 90 bp ACCTCCCACCAGGCCACCCGCTCCGAATCTCATCATCGGGAGGAGTaGGGGGCCCGGCTTCAGGACAGTCCGAGGCGGCGGACTGGGGTG +
Preference number: 5 (lower is better)
Translates to: TSHQATRSESHHREE*GARLQDSPRRRTGV
Trigger: CACCCCAGTCCGCCGCCTCGGACTGTCCTGAAGCCGGGCCCCTCACTCCTCCCGATGATGAGATTCGGAGCGGGTGGCCTGGTGGGAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS CCA 90 bp CAGGAGGCTCCTGTCCAGGGCAACTCAGCAGCCTCGGCGTCCACATaGCTGACCGCCGCTGGACTCTTGCGGGCGATGGAGGACTGGCGG +
Preference number: 5 (lower is better)
Translates to: QEAPVQGNSAASAST*LTAAGLLRAMEDWR
Trigger: CCGCCAGTCCTCCATCGCCCGCAAGAGTCCAGCGGCGGTCAGCCATGTGGACGCCGAGGCTGCTGAGTTGCCCTGGACAGGAGCCTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR CAA 90 bp CCACCTCTGGCAAACGCTGGGAACAGAGCCCAGCGCCCCCATTCGCCGGGCTGCCCGCCATCACCCTGGTaGTCCCTGCGGTCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: PPLANAGNRAQRPHSPGCPPSPW*SLRSCL
Trigger: AAGGCAGGACCGCAGGGACAACCAGGGTGATGGCGG...GCAGCCCGGCGAATGGGGGCGCTGGGCTCTGTTCCCAGCGTTTGCCAGAGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS CCA 90 bp GGAGGAGTGAGGGGCCCGGCTTCAGGACAGTCCGAGGCGGCGGACTaGGGTGGGTGCAAAGGCCGGCTTGCATTTTGGGAGAGTGGTCCC +
Preference number: 5 (lower is better)
Translates to: GGVRGPASGQSEAAD*GGCKGRLAFWESGP
Trigger: GGGACCACTCTCCCAAAATGCAAGCCGGCCTTTGCACCCACCCCAGTCCGCCGCCTCGGACTGTCCTGAAGCCGGGCCCCTCACTCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR CAA 90 bp GGCGGAAACCGACCTTGGTTTCCCAGCAGGCCCCACAGCTGCTCGGTCTCTGGAGCCCGGTCGGGCTGGTaGCTCTGGATGGCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: GGNRPWFPSRPHSCSVSGARSGW*LWMALR
Trigger: CCTCAAGGCCATCCAGAGCAACCAGCCCGACCGGGC...TCCAGAGACCGAGCAGCTGTGGGGCCTGCTGGGAAACCAAGGTCGGTTTCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS GCA 90 bp AGGACAGTCCGAGGCGGCGGACTGGGGTGGGTGCAAAGGCCGGCTTaGATTTTGGGAGAGTGGTCCCTGACCCTCAGCCCGAGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: RTVRGGGLGWVQRPA*ILGEWSLTLSPRGE
Trigger: CTCACCTCTCGGGCTGAGGGTCAGGGACCACTCTCCCAAAATGCAAGCCGGCCTTTGCACCCACCCCAGTCCGCCGCCTCGGACTGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR CAA 90 bp CCCACCAGCGCTGCTGAGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTTGTGCCGCCATCACCCTGGTaGTCCCTGCGGTCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: PTSAAERGEVVSPKQVLVPPSPW*SLRSCL
Trigger: AAGGCAGGACCGCAGGGACAACCAGGGTGATGGCGG...CACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAGCAGCGCTGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp ACTCATGACCTTCTGTTCCCTTCCTCAGACCGCAGGCGAGATGCCTGGGCAAGGCCCCACCAACCCCACTaGCGGCCTGCCCTCCTGCGG +
Preference number: 5 (lower is better)
Translates to: THDLLFPSSDRRRDAWARPHQPH*RPALLR
Trigger: CCGCAGGAGGGCAGGCCGCAAGTGGGGTTGGTGGGG...CCTTGCCCAGGCATCTCGCCTGCGGTCTGAGGAAGGGAACAGAAGGTCATGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CAA 90 bp GCTGCTGAGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTTGTGGGGCCTCTAGTCTGTGGGTGGGGGTaGGTCACCGGCAGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: AAERGEVVSPKQVLVGPLVCGWG*VTGSLW
Trigger: CCACAGACTGCCGGTGACCAACCCCCACCCACAGAC...TAGAGGCCCCACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp GGGCGTGGGGGCAGAGCACCGGGGCCACAGTGGGTAGGCACTCTGGCCACATCATTCTTCCTCCTATCTTaGGCCAGGGCCTCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: GRGGRAPGPQWVGTLATSFFLLS*ARASGF
Trigger: GAAGCCAGAGGCCCTGGCCAAAGATAGGAGGAAGAA...TGATGTGGCCAGAGTGCCTACCCACTGTGGCCCCGGTGCTCTGCCCCCACGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp GAAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCCCGCCATCACCCTGGTaGTCCCTGCGGTCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: EGGSLLPATLISPPPLLCPPSPW*SLRSCL
Trigger: AAGGCAGGACCGCAGGGACAACCAGGGTGATGGCGG...GCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS TCA 90 bp GGCTTGCATTTTGGGAGAGTGGTCCCTGACCCTCAGCCCGAGAGGTaGGAGGGAGTGAAGATACGGAAGCGCCTTTCCCTGGCGCCCGAA +
Preference number: 5 (lower is better)
Translates to: GLHFGRVVPDPQPER*EGVKIRKRLSLAPE
Trigger: TTCGGGCGCCAGGGAAAGGCGCTTCCGTATCTTCACTCCCTCTCACCTCTCGGGCTGAGGGTCAGGGACCACTCTCCCAAAATGCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR CAA 90 bp CCCACCAGCGCTGCTGAGAGGGGAGAGGTGGTCTCACCCAAGCAGGTCCTTGTGGTCTGTGGTTTCTGGTaGAGGGACTCAATCAGGGCG +
Preference number: 5 (lower is better)
Translates to: PTSAAERGEVVSPKQVLVVCGFW*RDSIRA
Trigger: CGCCCTGATTGAGTCCCTCAACCAGAAACCACAGAC...CACAAGGACCTGCTTGGGTGAGACCACCTCTCCCCTCTCAGCAGCGCTGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp GGCGGAAACCGACCTTGGTTTCCCAGCAGGCCCCACAGCTGCTCGGTCTCTGGAGCTGTGCCAATGGCTTaGAAGGCTTCAGTGGCACCA +
Preference number: 5 (lower is better)
Translates to: GGNRPWFPSRPHSCSVSGAVPMA*KASVAP
Trigger: TGGTGCCACTGAAGCCTTCAAAGCCATTGGCACAGC...TCCAGAGACCGAGCAGCTGTGGGGCCTGCTGGGAAACCAAGGTCGGTTTCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CAA 90 bp GAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGGCAGGCAGGGCGGAAACCGACCTaGGTTTCCCAGCAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: EGSWPTYSHMVLPGIRQAGRKPT*VSQQAP
Trigger: TGGGGCCTGCTGGGAAACCAAGGTCGGTTTCCGCCC...TGCCTGCCTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CAA 90 bp GGCCGGATGCCTGTGGCTTCCAGGCTGCCAGGTGTGACGGCATTCGAGAGAGTGGCATATGGGGCTCTCTaGGGCCCCACCATATGTGAT +
Preference number: 5 (lower is better)
Translates to: GRMPVASRLPGVTAFERVAYGAL*GPTICD
Trigger: ATCACATATGGTGGGGCCCAAGAGAGCCCCATATGC...CACTCTCTCGAATGCCGTCACACCTGGCAGCCTGGAAGCCACAGGCATCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CAA 90 bp GCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGGCAGGCAGTGTGTCTGTGGGTGGGGGTaGGTCACCGGCAGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: ALGPPIPTWFFLVSGRQCVCGWG*VTGSLW
Trigger: CCACAGACTGCCGGTGACCAACCCCCACCCACAGAC...ACACTGCCTGCCTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CAA 90 bp GAAAGGGGAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGGGGCGGAAACCGACCTaGGTTTCCCAGCAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: ERGGLLAHLFPHGSSWYQGRKPT*VSQQAP
Trigger: TGGGGCCTGCTGGGAAACCAAGGTCGGTTTCCGCCC...CTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS TCA 90 bp TTGGGAGAGTGGTCCCTGACCCTCAGCCCGAGAGGTGAGAGGGAGTaGAGATACGGAAGCGCCTTTCCCTGGCGCCCGAAGAACAGAAAT +
Preference number: 5 (lower is better)
Translates to: LGEWSLTLSPRGERE*RYGSAFPWRPKNRN
Trigger: ATTTCTGTTCTTCGGGCGCCAGGGAAAGGCGCTTCCGTATCTTCACTCCCTCTCACCTCTCGGGCTGAGGGTCAGGGACCACTCTCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS CCA 90 bp TATGGGCCCCAAGACAGGAGGTGCCGCACAGACCAGAGGAGTAGTTaGTTCCCTCTCAAACCAGAGCAGGGACCCGCACACTCCCTGAAA +
Preference number: 5 (lower is better)
Translates to: YGPQDRRCRTDQRSS*FPLKPEQGPAHSLK
Trigger: TTTCAGGGAGTGTGCGGGTCCCTGCTCTGGTTTGAGAGGGAACCAACTACTCCTCTGGTCTGTGCGGCACCTCCTGTCTTGGGGCCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473051.1
CDS-3UTR CAA 90 bp AGTAAGGCTTTGGAAGACGGCGGGCGCAATGACACACCCACCGCCACAGGAAAACACCCAAGCAGGTCCTaGTGGGGCCTCTACTGTGAC +
Preference number: 5 (lower is better)
Translates to: SKALEDGGRNDTPTATGKHPSRS*WGLYCD
Trigger: GTCACAGTAGAGGCCCCACAAGGACCTGCTTGGGTG...TTTTCCTGTGGCGGTGGGTGTGTCATTGCGCCCGCCGTCTTCCAAAGCCTTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp TTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTCCGCCAGCCCTGCGAGGGAGGTTCAGGTGTATCCTTaGTCCAAGGTACGAGAGGAG +
Preference number: 5 (lower is better)
Translates to: FCILGERRCGASASPAREVQVYP*SKVREE
Trigger: CTCCTCTCGTACCTTGGACAAAGGATACACCTGAAC...CTCCCTCGCAGGGCTGGCGGAGGCTCCGCATCGCCTCTCTCCTAGGATACAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp ATTCGCCGGGCTGCAGAAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTTGGGGAAGTAAGGCTTaGGAAGACGGCGGGCGCAAT +
Preference number: 5 (lower is better)
Translates to: IRRAAEGGSLLPATLISPWGSKA*EDGGRN
Trigger: ATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCA...AGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTTCTGCAGCCCGGCGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CAA 90 bp GCTTTGGAAGACGGCGGGCGCAATGACACACCCACCGCCACAGGAAAACATGGTTGGGGAAGTAAGGCTTaGGAAGACGGCGGGCGCAAT +
Preference number: 5 (lower is better)
Translates to: ALEDGGRNDTPTATGKHGWGSKA*EDGGRN
Trigger: ATTGCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCA...ACCATGTTTTCCTGTGGCGGTGGGTGTGTCATTGCGCCCGCCGTCTTCCAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS GCA 90 bp CCACCCTCCGCCCCTCCTTTCCCGAGTTTTGAGCGAGGGTGGAAGTaGTACCGTATGTCTTCTAAGAAAGGGACGGCTGGTGTAGGTGTC +
Preference number: 5 (lower is better)
Translates to: PPSAPPFPSFERGWK*YRMSSKKGTAGVGV
Trigger: GACACCTACACCAGCCGTCCCTTTCTTAGAAGACATACGGTAGCACTTCCACCCTCGCTCAAAACTCGGGAAAGGAGGGGCGGAGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS GCA 90 bp CCCGAAACCCTCTCCAAGGGGAGGCAAACAGGCCAAAGATCAACCTaGAAGAGTCCGGAGGGAGGAAAGTTCAGCAGTCCAGGCTACCTC +
Preference number: 5 (lower is better)
Translates to: PETLSKGRQTGQRST*KSPEGGKFSSPGYL
Trigger: GAGGTAGCCTGGACTGCTGAACTTTCCTCCCTCCGGACTCTTGCAGGTTGATCTTTGGCCTGTTTGCCTCCCCTTGGAGAGGGTTTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR CAA 90 bp TTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCCGGGCCGCCTGGCTCTaGTCATCGCCGAACTGGTCA +
Preference number: 5 (lower is better)
Translates to: FYFRCHGFCILGERRCGARAAWL*SSPNWS
Trigger: TGACCAGTTCGGCGATGACAAGAGCCAGGCGGCCCG...GGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CAA 90 bp AAGGAGGGAGCCTGCTACCAGCAACTCTCATTTCCCCTCCACCCCTCCTGTGCTTGGGGACAGGAGTCTTaGCCACAATCACCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: KEGACYQQLSFPLHPSCAWGQES*PQSPGF
Trigger: GAAGCCTGGTGATTGTGGCAAAGACTCCTGTCCCCA...AGCACAGGAGGGGTGGAGGGGAAATGAGAGTTGCTGGTAGCAGGCTCCCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CAA 90 bp ACTCATGACCTTCTGTTCCCTTCCTCAGACCGCAGGCGAGATGCCTGGGCAAGGGCATATGGGGCTCTCTaGGGCCCCACCATATGTGAT +
Preference number: 5 (lower is better)
Translates to: THDLLFPSSDRRRDAWARAYGAL*GPTICD
Trigger: ATCACATATGGTGGGGCCCAAGAGAGCCCCATATGC...CCTTGCCCAGGCATCTCGCCTGCGGTCTGAGGAAGGGAACAGAAGGTCATGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CAA 90 bp GAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGGCAGGCAGAAAGGGGAGGGCTCTaGGCCCACCTATTCCCACAT +
Preference number: 5 (lower is better)
Translates to: EGSWPTYSHMVLPGIRQAERGGL*AHLFPH
Trigger: ATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTC...TGCCTGCCTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CAA 90 bp GGGCGTGGGGGCAGAGCACCGGGGCCACAGTGGGTAGGCACTCTGGCCACATCATACATTCTACTTTCGTaGCCATGGTTTCTGTATCCT +
Preference number: 5 (lower is better)
Translates to: GRGGRAPGPQWVGTLATSYILLS*PWFLYP
Trigger: AGGATACAGAAACCATGGCAACGAAAGTAGAATGTA...TGATGTGGCCAGAGTGCCTACCCACTGTGGCCCCGGTGCTCTGCCCCCACGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp ATCACCTCCTGGCTGGCAGCTTGGGGAAGTAAGGCTTTGGAAGACGGCGGGCGCGGATCTATGTTCTTATaGCACATGGCTCAGCCCGTC +
Preference number: 5 (lower is better)
Translates to: ITSWLAAWGSKALEDGGRGSMFL*HMAQPV
Trigger: GACGGGCTGAGCCATGTGCAATAAGAACATAGATCC...GCGCCCGCCGTCTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCAGGAGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp GCTTTGGAAGACGGCGGGCGCAATGACACACCCACCGCCACAGGAAAACATGGTCGCTCAGCTTCATCCTaGTTGGATTCCATGGCGGAA +
Preference number: 5 (lower is better)
Translates to: ALEDGGRNDTPTATGKHGRSASS*LDSMAE
Trigger: TTCCGCCATGGAATCCAACAAGGATGAAGCTGAGCG...ACCATGTTTTCCTGTGGCGGTGGGTGTGTCATTGCGCCCGCCGTCTTCCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp GAGGGCTCTTGGCCCACCTATTCCCACATGGTTCTTCCTGGTATCAGGCAGGCAGCTGTGCCAATGGCTTaGAAGGCTTCAGTGGCACCA +
Preference number: 5 (lower is better)
Translates to: EGSWPTYSHMVLPGIRQAAVPMA*KASVAP
Trigger: TGGTGCCACTGAAGCCTTCAAAGCCATTGGCACAGC...TGCCTGCCTGATACCAGGAAGAACCATGTGGGAATAGGTGGGCCAAGAGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CAA 90 bp ATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCCGCCATCACCCTGGTaGTCCCTGCGGTCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: ILLSLPWFLYPRREAMRSPPSPW*SLRSCL
Trigger: AAGGCAGGACCGCAGGGACAACCAGGGTGATGGCGG...GCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CAA 90 bp GGGCACCCACACAGAGAAGAACCTTCACTGCTTCTGCCCACACTTCTCTGGGCTTGGGGACAGGAGTCTTaGCCACAATCACCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: GHPHREEPSLLLPTLLWAWGQES*PQSPGF
Trigger: GAAGCCTGGTGATTGTGGCAAAGACTCCTGTCCCCA...AGCCCAGAGAAGTGTGGGCAGAAGCAGTGAAGGTTCTTCTCTGTGTGGGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000463786.2
CDS-3UTR CAA 90 bp TACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGCGGGCCGCCTGGCTCTaGTCATCGCCGAACTGGTCA +
Preference number: 5 (lower is better)
Translates to: YILLSLPWFLYPRREAMRRAAWL*SSPNWS
Trigger: TGACCAGTTCGGCGATGACAAGAGCCAGGCGGCCCG...CCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CAA 90 bp GTGGACCAAGAAGCCCCGGGTGGCCCTCAGCAACAGTTTCAAGTTCCCACTCTGGGATCTATGTTCTTATaGCACATGGCTCAGCCCGTC +
Preference number: 5 (lower is better)
Translates to: VDQEAPGGPQQQFQVPTLGSMFL*HMAQPV
Trigger: GACGGGCTGAGCCATGTGCAATAAGAACATAGATCC...CAGAGTGGGAACTTGAAACTGTTGCTGAGGGCCACCCGGGGCTTCTTGGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CAA 90 bp GCATATGGGGCTCTCTTGGGCCCCACCATATGTGATGGCCTAAATACCAGGGCACGCTCAGCTTCATCCTaGTTGGATTCCATGGCGGAA +
Preference number: 5 (lower is better)
Translates to: AYGALLGPTICDGLNTRARSASS*LDSMAE
Trigger: TTCCGCCATGGAATCCAACAAGGATGAAGCTGAGCG...TGCCCTGGTATTTAGGCCATCACATATGGTGGGGCCCAAGAGAGCCCCATATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CAA 90 bp ACCAGATTTGACATTTCCTTACCGAACTTCCTTTCCCAGCAAGAATCCTATTTGCCCCACCAACCCCACTaGCGGCCTGCCCTCCTGCGG +
Preference number: 5 (lower is better)
Translates to: TRFDISLPNFLSQQESYLPHQPH*RPALLR
Trigger: CCGCAGGAGGGCAGGCCGCAAGTGGGGTTGGTGGGG...CAAATAGGATTCTTGCTGGGAAAGGAAGTTCGGTAAGGAAATGTCAAATCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CAA 90 bp ATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCACCCAAGCAGGTCCTaGTGGGGCCTCTACTGTGAC +
Preference number: 5 (lower is better)
Translates to: ILLSLPWFLYPRREAMRSHPSRS*WGLYCD
Trigger: GTCACAGTAGAGGCCCCACAAGGACCTGCTTGGGTG...GCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp TGGGTGAGAGAGAGGGCAGCTGTGCAGCGTTCGGCCTCCAATTCCATTTTAATTGTCTGTGGTTTCTGGTaGAGGGACTCAATCAGGGCG +
Preference number: 5 (lower is better)
Translates to: WVRERAAVQRSASNSILIVCGFW*RDSIRA
Trigger: CGCCCTGATTGAGTCCCTCAACCAGAAACCACAGAC...AATTAAAATGGAATTGGAGGCCGAACGCTGCACAGCTGCCCTCTCTCTCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp GGAAAAACCAGTGGCAATGATGGAGCTGTGCCCTGTGGCACCTATAAGGCAAAGGCTGTGCCAATGGCTTaGAAGGCTTCAGTGGCACCA +
Preference number: 5 (lower is better)
Translates to: GKTSGNDGAVPCGTYKAKAVPMA*KASVAP
Trigger: TGGTGCCACTGAAGCCTTCAAAGCCATTGGCACAGC...CTTTGCCTTATAGGTGCCACAGGGCACAGCTCCATCATTGCCACTGGTTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp TTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGAGCCTTCTTCCTCCTATCTTaGGCCAGGGCCTCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: FYFRCHGFCILGERRCGAFFLLS*ARASGF
Trigger: GAAGCCAGAGGCCCTGGCCAAAGATAGGAGGAAGAA...GGCTCCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS TCA 90 bp TTGCTCTGCATCCCTGACTGGCAGGCTCAAGTGAGAAGGCACAGGTaGAGGAGCTTCCTAAACTGCAAAGCCCTATGGGTATTATTGCCA +
Preference number: 5 (lower is better)
Translates to: LLCIPDWQAQVRRHR*RSFLNCKALWVLLP
Trigger: TGGCAATAATACCCATAGGGCTTTGCAGTTTAGGAAGCTCCTTCACCTGTGCCTTCTCACTTGAGCCTGCCAGTCAGGGATGCAGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR CAA 90 bp TACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGAGAGGCGATGCGGCTCCTTTCCCGAGTTTaGAGCGAGGGTGGAAGTGCT +
Preference number: 5 (lower is better)
Translates to: YILLSLPWFLYPRREAMRLLSRV*SEGGSA
Trigger: AGCACTTCCACCCTCGCTCAAAACTCGGGAAAGGAG...CCGCATCGCCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp CTGACTCGGAGGAAGAACTTTCTGAAGTCCTTGGTGCATGACTTAGGAAAAACCCTCCTTTCCCGAGTTTaGAGCGAGGGTGGAAGTGCT +
Preference number: 5 (lower is better)
Translates to: LTRRKNFLKSLVHDLGKTLLSRV*SEGGSA
Trigger: AGCACTTCCACCCTCGCTCAAAACTCGGGAAAGGAG...GGTTTTTCCTAAGTCATGCACCAAGGACTTCAGAAAGTTCTTCCTCCGAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp TTTCTTTGTTTGTCTTTCCTCAAATATACAGTCCATCACCTTGGCTCAGTGCATCGGGCCGCCTGGCTCTaGTCATCGCCGAACTGGTCA +
Preference number: 5 (lower is better)
Translates to: FLCLSFLKYTVHHLGSVHRAAWL*SSPNWS
Trigger: TGACCAGTTCGGCGATGACAAGAGCCAGGCGGCCCG...ATGCACTGAGCCAAGGTGATGGACTGTATATTTGAGGAAAGACAAACAAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
ENST00000463786.2
CDS-3UTR CAA 90 bp GGCAATGATGGAGCTGTGCCCTGTGGCACCTATAAGGCAAAGCCCACTGAGGGAAACTTTCTGAAGTCCTaGGTGCATGACTTAGGAAAA +
Preference number: 5 (lower is better)
Translates to: GNDGAVPCGTYKAKPTEGNFLKS*VHDLGK
Trigger: TTTTCCTAAGTCATGCACCAAGGACTTCAGAAAGTT...TCCCTCAGTGGGCTTTGCCTTATAGGTGCCACAGGGCACAGCTCCATCATTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp TCCTTGGTGCATGACTTAGGAAAAACCAGTGGCAATGATGGAGCTGTGCCCTGTGAAGTGGCTGCTTCATaGCAGGGTTGGACCTTGTTT +
Preference number: 5 (lower is better)
Translates to: SLVHDLGKTSGNDGAVPCEVAAS*QGWTLF
Trigger: AAACAAGGTCCAACCCTGCAATGAAGCAGCCACTTC...ACAGGGCACAGCTCCATCATTGCCACTGGTTTTTCCTAAGTCATGCACCAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS GCA 90 bp CCTAAACTGCAAAGCCCTATGGGTATTATTGCCAATCACATTATCTaGGCCAACCCTCTAATCTTCCCGAGGAGGAAACCCAAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: PKLQSPMGIIANHII*ANPLIFPRRKPKLR
Trigger: CCTGAGCTTGGGTTTCCTCCTCGGGAAGATTAGAGGGTTGGCGCAGATAATGTGATTGGCAATAATACCCATAGGGCTTTGCAGTTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR CAA 90 bp AAATCCTCATTTCAATGTGAGGGTAAGAAAACTATTCTGGTTCAGGTGTATCCTCGGGCCGCCTGGCTCTaGTCATCGCCGAACTGGTCA +
Preference number: 5 (lower is better)
Translates to: KSSFQCEGKKTILVQVYPRAAWL*SSPNWS
Trigger: TGACCAGTTCGGCGATGACAAGAGCCAGGCGGCCCG...AGGATACACCTGAACCAGAATAGTTTTCTTACCCTCACATTGAAATGAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp CACGCATCTATAAATTACATTCTATGGAGAGTTCTCTTTCTTCCTCCTATCTTTACCGCCGCTGGACTCTaGCGGGCGATGGAGGACTGG +
Preference number: 5 (lower is better)
Translates to: HASINYILWRVLFLPPIFTAAGL*RAMEDW
Trigger: CCAGTCCTCCATCGCCCGCAAGAGTCCAGCGGCGGT...AAAGATAGGAGGAAGAAAGAGAACTCTCCATAGAATGTAATTTATAGATGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS TCA 90 bp TTCCTCACCCATAGAATAAAGATAATGATCTTTGCTCTGCATCCCTaGCTGGCAGGCTCAAGTGAGAAGGCACAGGTGAAGGAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: FLTHRIKIMIFALHP*LAGSSEKAQVKELP
Trigger: AGGAAGCTCCTTCACCTGTGCCTTCTCACTTGAGCCTGCCAGTCAGGGATGCAGAGCAAAGATCATTATCTTTATTCTATGGGTGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR CAA 90 bp TTCCCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCGCTGTGCCAATGGCTTaGAAGGCTTCAGTGGCACCA +
Preference number: 5 (lower is better)
Translates to: FPLISAASFTFYFRCHGFAVPMA*KASVAP
Trigger: TGGTGCCACTGAAGCCTTCAAAGCCATTGGCACAGC...GAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CAA 90 bp TCCTTTAGGATCTATGTTCTTATTGCACATGGCTCAGCCCGTCTAGGGACATCTGTTCAGGTGTATCCTTaGTCCAAGGTACGAGAGGAG +
Preference number: 5 (lower is better)
Translates to: SFRIYVLIAHGSARLGTSVQVYP*SKVREE
Trigger: CTCCTCTCGTACCTTGGACAAAGGATACACCTGAAC...AGATGTCCCTAGACGGGCTGAGCCATGTGCAATAAGAACATAGATCCTAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp CGCATCTATAAATTACATTCTATGGAGAGTTCTCTTTCTTCCTCCTATCTTTGGGAAAGGGGAGGGCTCTaGGCCCACCTATTCCCACAT +
Preference number: 5 (lower is better)
Translates to: RIYKLHSMESSLSSSYLWERGGL*AHLFPH
Trigger: ATGTGGGAATAGGTGGGCCAAGAGCCCTCCCCTTTC...CCAAAGATAGGAGGAAGAAAGAGAACTCTCCATAGAATGTAATTTATAGATGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338820.7
CDS-3UTR CAA 90 bp CTTACCGAACTTCCTTTCCCAGCAAGAATCCTATTTGTTGGGGGACTTTTAAAAGAAGTGGCTGCTTCATaGCAGGGTTGGACCTTGTTT +
Preference number: 5 (lower is better)
Translates to: LTELPFPARILFVGGLLKEVAAS*QGWTLF
Trigger: AAACAAGGTCCAACCCTGCAATGAAGCAGCCACTTC...TTTTAAAAGTCCCCCAACAAATAGGATTCTTGCTGGGAAAGGAAGTTCGGTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp CACGCATCTATAAATTACATTCTATGGAGAGTTCTCTTTCTTCCTCCTATCTTTGGTGCAAAGGCCGGCTaGCATTTTGGGAGAGTGGTC +
Preference number: 5 (lower is better)
Translates to: HASINYILWRVLFLPPIFGAKAG*HFGRVV
Trigger: GACCACTCTCCCAAAATGCAAGCCGGCCTTTGCACC...AAAGATAGGAGGAAGAAAGAGAACTCTCCATAGAATGTAATTTATAGATGCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR CAA 90 bp TCCTTTAGGATCTATGTTCTTATTGCACATGGCTCAGCCCGTCTAGGGACATCTAACTTTCTGAAGTCCTaGGTGCATGACTTAGGAAAA +
Preference number: 5 (lower is better)
Translates to: SFRIYVLIAHGSARLGTSNFLKS*VHDLGK
Trigger: TTTTCCTAAGTCATGCACCAAGGACTTCAGAAAGTT...AGATGTCCCTAGACGGGCTGAGCCATGTGCAATAAGAACATAGATCCTAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS-3UTR CAA 90 bp TCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTATCCTAGGAGCCCTATGGGTATTATaGCCAATCACATTATCTGCG +
Preference number: 5 (lower is better)
Translates to: SAASFTFYFRCHGFCILGALWVL*PITLSA
Trigger: CGCAGATAATGTGATTGGCAATAATACCCATAGGGC...TCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS-3UTR CAA 90 bp CCACTGATATCTGCTGCGAGTTTTACATTCTACTTTCGTTGCCATGGTTTCTGTTACATTCTACTTTCGTaGCCATGGTTTCTGTATCCT +
Preference number: 5 (lower is better)
Translates to: PLISAASFTFYFRCHGFCYILLS*PWFLYP
Trigger: AGGATACAGAAACCATGGCAACGAAAGTAGAATGTA...ACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTCGCAGCAGATATCAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338820.7
ENST00000394903.6
ENST00000461919.5
CDS-3UTR CAA 90 bp CACGCATCTATAAATTACATTCTATGGAGAGTTCTCTTTCTTCCTCCTATCTTTATAGTAATCTTTACATaGCTTGACCCTCAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: HASINYILWRVLFLPPIFIVIFT*LDPQVS
Trigger: GGACACCTGAGGGTCAAGCAATGTAAAGATTACTAT...AAAGATAGGAGGAAGAAAGAGAACTCTCCATAGAATGTAATTTATAGATGCGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS TCA 72 bp CAGGCCACCCGCTCCGAATCTCATCATCGGGAGGAGTaGGGGGCCCGGCTTCAGGACAGTCCGAGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: QATRSESHHREE*GARLQDSPRRR
Trigger: CCGCCGCCTCGGACTGTCCTGAAGCCGGGCCCCTCACTCCTCCCGATGATGAGATTCGGAGCGGGTGGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS TCA 72 bp CTGGACTCTTGCGGGCGATGGAGGACTGGCGGTGGCTaGGGTCAGCACCTCCCACCAGGCCACCCGCTCCGA +
Preference number: 6 (lower is better)
Translates to: LDSCGRWRTGGG*GQHLPPGHPLR
Trigger: TCGGAGCGGGTGGCCTGGTGGGAGGTGCTGACCTCAGCCACCGCCAGTCCTCCATCGCCCGCAAGAGTCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS CCA 72 bp CTGACCGCCGCTGGACTCTTGCGGGCGATGGAGGACTaGCGGTGGCTGAGGTCAGCACCTCCCACCAGGCCA +
Preference number: 6 (lower is better)
Translates to: LTAAGLLRAMED*RWLRSAPPTRP
Trigger: TGGCCTGGTGGGAGGTGCTGACCTCAGCCACCGCCAGTCCTCCATCGCCCGCAAGAGTCCAGCGGCGGTCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS CCA 72 bp CTCAGCAGCCTCGGCGTCCACATGGCTGACCGCCGCTaGACTCTTGCGGGCGATGGAGGACTGGCGGTGGCT +
Preference number: 6 (lower is better)
Translates to: LSSLGVHMADRR*TLAGDGGLAVA
Trigger: AGCCACCGCCAGTCCTCCATCGCCCGCAAGAGTCCAGCGGCGGTCAGCCATGTGGACGCCGAGGCTGCTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS CAA 72 bp GCCTCGGCGTCCACATGGCTGACCGCCGCTGGACTCTaGCGGGCGATGGAGGACTGGCGGTGGCTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: ASASTWLTAAGL*RAMEDWRWLRS
Trigger: TGACCTCAGCCACCGCCAGTCCTCCATCGCCCGCAAGAGTCCAGCGGCGGTCAGCCATGTGGACGCCGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS CAA 90 bp AACTCAGCAGCCTCGGCGTCCACATGGCTGACCGCCGCTGGACTCTaGCGGGCGATGGAGGACTGGCGGTGGCTGAGGTCAGCACCTCCC +
Preference number: 6 (lower is better)
Translates to: NSAASASTWLTAAGL*RAMEDWRWLRSAPP
Trigger: GGGAGGTGCTGACCTCAGCCACCGCCAGTCCTCCATCGCCCGCAAGAGTCCAGCGGCGGTCAGCCATGTGGACGCCGAGGCTGCTGAGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS CCA 72 bp AGGGGCCCGGCTTCAGGACAGTCCGAGGCGGCGGACTaGGGTGGGTGCAAAGGCCGGCTTGCATTTTGGGAG +
Preference number: 6 (lower is better)
Translates to: RGPASGQSEAAD*GGCKGRLAFWE
Trigger: CTCCCAAAATGCAAGCCGGCCTTTGCACCCACCCCAGTCCGCCGCCTCGGACTGTCCTGAAGCCGGGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS CCA 72 bp CCTGTCCAGGGCAACTCAGCAGCCTCGGCGTCCACATaGCTGACCGCCGCTGGACTCTTGCGGGCGATGGAG +
Preference number: 6 (lower is better)
Translates to: PVQGNSAASAST*LTAAGLLRAME
Trigger: CTCCATCGCCCGCAAGAGTCCAGCGGCGGTCAGCCATGTGGACGCCGAGGCTGCTGAGTTGCCCTGGACAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS CAA 90 bp GTCCGAGGCGGCGGACTGGGGTGGGTGCAAAGGCCGGCTTGCATTTaGGGAGAGTGGTCCCTGACCCTCAGCCCGAGAGGTGAGAGGGAG +
Preference number: 6 (lower is better)
Translates to: VRGGGLGWVQRPACI*GEWSLTLSPRGERE
Trigger: CTCCCTCTCACCTCTCGGGCTGAGGGTCAGGGACCACTCTCCCAAAATGCAAGCCGGCCTTTGCACCCACCCCAGTCCGCCGCCTCGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS CCA 72 bp CCCGGCTTCAGGACAGTCCGAGGCGGCGGACTGGGGTaGGTGCAAAGGCCGGCTTGCATTTTGGGAGAGTGG +
Preference number: 6 (lower is better)
Translates to: PGFRTVRGGGLG*VQRPACILGEW
Trigger: CCACTCTCCCAAAATGCAAGCCGGCCTTTGCACCCACCCCAGTCCGCCGCCTCGGACTGTCCTGAAGCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS GCA 72 bp GCTTCAGGACAGTCCGAGGCGGCGGACTGGGGTGGGTaGAAAGGCCGGCTTGCATTTTGGGAGAGTGGTCCC +
Preference number: 6 (lower is better)
Translates to: ASGQSEAADWGG*KGRLAFWESGP
Trigger: GGGACCACTCTCCCAAAATGCAAGCCGGCCTTTGCACCCACCCCAGTCCGCCGCCTCGGACTGTCCTGAAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS CCA 72 bp GGGTGGGTGCAAAGGCCGGCTTGCATTTTGGGAGAGTaGTCCCTGACCCTCAGCCCGAGAGGTGAGAGGGAG +
Preference number: 6 (lower is better)
Translates to: GWVQRPACILGE*SLTLSPRGERE
Trigger: CTCCCTCTCACCTCTCGGGCTGAGGGTCAGGGACCACTCTCCCAAAATGCAAGCCGGCCTTTGCACCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS TCA 72 bp TTTGGGAGAGTGGTCCCTGACCCTCAGCCCGAGAGGTaGGAGGGAGTGAAGATACGGAAGCGCCTTTCCCTG +
Preference number: 6 (lower is better)
Translates to: FGRVVPDPQPER*EGVKIRKRLSL
Trigger: CAGGGAAAGGCGCTTCCGTATCTTCACTCCCTCTCACCTCTCGGGCTGAGGGTCAGGGACCACTCTCCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS CCA 72 bp CAAGACAGGAGGTGCCGCACAGACCAGAGGAGTAGTTaGTTCCCTCTCAAACCAGAGCAGGGACCCGCACAC +
Preference number: 6 (lower is better)
Translates to: QDRRCRTDQRSS*FPLKPEQGPAH
Trigger: GTGTGCGGGTCCCTGCTCTGGTTTGAGAGGGAACCAACTACTCCTCTGGTCTGTGCGGCACCTCCTGTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473051.1
CDS CAA 90 bp GCGCGGAGTGATGACATCCACCCTCCGCCCCTCCTTTCCCGAGTTTaGAGCGAGGGTGGAAGTGCTACCGTATGTCTTCTAAGAAAGGGA +
Preference number: 6 (lower is better)
Translates to: ARSDDIHPPPLLSRV*SEGGSATVCLLRKG
Trigger: TCCCTTTCTTAGAAGACATACGGTAGCACTTCCACCCTCGCTCAAAACTCGGGAAAGGAGGGGCGGAGGGTGGATGTCATCACTCCGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS GCA 72 bp CTCTCCAAGGGGAGGCAAACAGGCCAAAGATCAACCTaGAAGAGTCCGGAGGGAGGAAAGTTCAGCAGTCCA +
Preference number: 6 (lower is better)
Translates to: LSKGRQTGQRST*KSPEGGKFSSP
Trigger: TGGACTGCTGAACTTTCCTCCCTCCGGACTCTTGCAGGTTGATCTTTGGCCTGTTTGCCTCCCCTTGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS CAA 72 bp GATGACATCCACCCTCCGCCCCTCCTTTCCCGAGTTTaGAGCGAGGGTGGAAGTGCTACCGTATGTCTTCTA +
Preference number: 6 (lower is better)
Translates to: DDIHPPPLLSRV*SEGGSATVCLL
Trigger: TAGAAGACATACGGTAGCACTTCCACCCTCGCTCAAAACTCGGGAAAGGAGGGGCGGAGGGTGGATGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338820.7
ENST00000394903.6
CDS TCA 72 bp ATCCCTGACTGGCAGGCTCAAGTGAGAAGGCACAGGTaGAGGAGCTTCCTAAACTGCAAAGCCCTATGGGTA +
Preference number: 6 (lower is better)
Translates to: IPDWQAQVRRHR*RSFLNCKALWV
Trigger: TACCCATAGGGCTTTGCAGTTTAGGAAGCTCCTTCACCTGTGCCTTCTCACTTGAGCCTGCCAGTCAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS GCA 72 bp CAAAGCCCTATGGGTATTATTGCCAATCACATTATCTaGGCCAACCCTCTAATCTTCCCGAGGAGGAAACCC +
Preference number: 6 (lower is better)
Translates to: QSPMGIIANHII*ANPLIFPRRKP
Trigger: GGGTTTCCTCCTCGGGAAGATTAGAGGGTTGGCGCAGATAATGTGATTGGCAATAATACCCATAGGGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS TCA 72 bp CATAGAATAAAGATAATGATCTTTGCTCTGCATCCCTaGCTGGCAGGCTCAAGTGAGAAGGCACAGGTGAAG +
Preference number: 6 (lower is better)
Translates to: HRIKIMIFALHP*LAGSSEKAQVK
Trigger: CTTCACCTGTGCCTTCTCACTTGAGCCTGCCAGTCAGGGATGCAGAGCAAAGATCATTATCTTTATTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461919.5
CDS CCA 72 bp AGTCACAGAACATTTTACTTTCTAGCTGTGTCATCCTaGGCATCCCTTACCTCAGAGATTTTCCTCACCCAT +
Preference number: 6 (lower is better)
Translates to: SHRTFYFLAVSS*ASLTSEIFLTH
Trigger: ATGGGTGAGGAAAATCTCTGAGGTAAGGGATGCCCAGGATGACACAGCTAGAAAGTAAAATGTTCTGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461919.5