RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAJA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000103423

Ensembl transcript IDs: ENST00000262375.11, ENST00000355296.8, ENST00000431375.6, ENST00000570857.5, ENST00000572009.1, ENST00000572139.5, ENST00000572974.1, ENST00000573120.5, ENST00000574393.1, ENST00000574895.1, ENST00000575106.5, ENST00000576180.1, ENST00000576911.5, ENST00000577083.1, ENST00000612103.4, ENST00000614397.4, ENST00000615114.2, ENST00000631547.1, ENST00000632045.1, ENST00000632459.1, ENST00000632730.1, ENST00000632858.1, ENST00000633082.1, ENST00000633170.1, ENST00000633240.1, ENST00000633648.1, ENST00000633931.1

Found 861 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTaGTGCTGTTCTGGAATCCTCCCGTCTCCCAGGTGCCCTGGCCCT +
Preference number: 1 (lower is better)
Translates to: CCCQGRPEALRVGAQ*CCSGILPSPRCPGP
Trigger: AGGGCCAGGGCACCTGGGAGACGGGAGGATTCCAGAACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR GCA 90 bp CCTCTGCCTGAGCCAGGGGCCGTCACCTACCAATGGACAGGAAACTaGCACCAGCCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCAC +
Preference number: 1 (lower is better)
Translates to: PLPEPGAVTYQWTGN*HQPLGLHPTARAVH
Trigger: GTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGCCCCTGGCTCAGGCAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR GCA 90 bp CACACGGTCAGAGCAGAACCCCCAGGGACTCTCTGGGCCTCTACGTaGCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGAAT +
Preference number: 1 (lower is better)
Translates to: HTVRAEPPGTLWAST*LPGTDCAAAWYPGN
Trigger: ATTCCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAGAGAGTCCCTGGGGGTTCTGCTCTGACCGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR CCA 90 bp AGGATCACCACCCACACGGTCAGAGCAGAACCCCCAGGGACTCTCTaGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGG +
Preference number: 1 (lower is better)
Translates to: RITTHTVRAEPPGTL*ASTCLPGTDCAAAW
Trigger: CCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAGAGAGTCCCTGGGGGTTCTGCTCTGACCGTGTGGGTGGTGATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR CCA 90 bp GGTCCACAGTGGGGCCTCCCTTCCAGTAGCTATGCTGGGAGCCGCTaGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGCATCGTACTGCT +
Preference number: 1 (lower is better)
Translates to: GPQWGLPSSSYAGSR*PQDRSLQSRRHRTA
Trigger: AGCAGTACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATAGCTACTGGAAGGGAGGCCCCACTGTGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR GCA 90 bp TTTCCATGCCGGAGCCGCCACAGTAGTGGCAATGCTGCACCTTGGTaGCGGGCTCGTTCCCCTTGCCGTTGCAGCGCTCACACGTGTCCA +
Preference number: 1 (lower is better)
Translates to: FPCRSRHSSGNAAPW*RARSPCRCSAHTCP
Trigger: TGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCCACTACTGTGGCGGCTCCGGCATGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR CCA 90 bp CAGGGGCCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTaGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCG +
Preference number: 1 (lower is better)
Translates to: QGPSPTNGQETATSL*GCILLPGLSTVTFP
Trigger: CGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR CCA 90 bp TGGTTTCCATGCCGGAGCCGCCACAGTAGTGGCAATGCTGCACCTTaGTGCCGGGCTCGTTCCCCTTGCCGTTGCAGCGCTCACACGTGT +
Preference number: 1 (lower is better)
Translates to: WFPCRSRHSSGNAAP*CRARSPCRCSAHTC
Trigger: ACACGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCCACTACTGTGGCGGCTCCGGCATGGAAACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR TCA 90 bp ACAGGCGGCCATCCCGGATGGGGTGGGAGCAAGGACTGTACATCCTaGCAAGGATCACCACCCACACGGTCAGAGCAGAACCCCCAGGGA +
Preference number: 1 (lower is better)
Translates to: TGGHPGWGGSKDCTS*QGSPPTRSEQNPQG
Trigger: TCCCTGGGGGTTCTGCTCTGACCGTGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTTGCTCCCACCCCATCCGGGATGGCCGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR GCA 90 bp CCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTaGATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGA +
Preference number: 1 (lower is better)
Translates to: PSPTNGQETATSLWG*ILLPGLSTVTFPWR
Trigger: TCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR CCA 90 bp TCTAACCATCTCCCTCTGCCTGAGCCAGGGGCCGTCACCTACCAATaGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGCC +
Preference number: 1 (lower is better)
Translates to: SNHLPLPEPGAVTYQ*TGNCHQPLGLHPTA
Trigger: GGCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGCCCCTGGCTCAGGCAGAGGGAGATGGTTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR TCA 90 bp CGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATaGTTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGA +
Preference number: 1 (lower is better)
Translates to: RAVHCDLSVERGVVP*FCCCQGRPEALRVG
Trigger: TCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR CCA 90 bp TCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTaGGAGCTCAGTGCTGCTGTTCTGGAATCCTCCCGTCTCCCAGGT +
Preference number: 1 (lower is better)
Translates to: SHDFAVAKAVQRLCG*ELSAAVLESSRLPG
Trigger: ACCTGGGAGACGGGAGGATTCCAGAACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR TCA 90 bp CCACCAGCCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTaGCCTTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTG +
Preference number: 1 (lower is better)
Translates to: PPASGAASYCPGCPL*PFRGERCCPMILLL
Trigger: CAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR GCA 90 bp CTTCCAGTAGCTATGCTGGGAGCCGCTGGCCCCAGGATCGAAGCCTaGAGAGCCGTAGGCATCGTACTGCTTCCTCTTCACCTCATCACT +
Preference number: 1 (lower is better)
Translates to: LPVAMLGAAGPRIEA*RAVGIVLLPLHLIT
Trigger: AGTGATGAGGTGAAGAGGAAGCAGTACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATAGCTACTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR CCA 90 bp TGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTaGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTC +
Preference number: 1 (lower is better)
Translates to: WGCILLPGLSTVTFP*REVLSHDFAVAKAV
Trigger: GACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR CCA 90 bp CAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCCGGATGGGGTaGGAGCAAGGACTGTACATCCTGACAAGGATCACCACCCACACG +
Preference number: 1 (lower is better)
Translates to: QQDSIVRDRRPSRMG*EQGLYILTRITTHT
Trigger: CGTGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTTGCTCCCACCCCATCCGGGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR GCA 90 bp TGCAGGCACAGGGATCATCACTCGCTTTTTCTGCTTGGCTTGTCCTaGTCCCCTGCAGACCACACAGGGCGATATGATGATGGAGCCGCG +
Preference number: 1 (lower is better)
Translates to: CRHRDHHSLFLLGLS*SPADHTGRYDDGAA
Trigger: CGCGGCTCCATCATCATATCGCCCTGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAGTGATGATCCCTGTGCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR GCA 90 bp CCATCCTCGACTCCTGCAGGCACAGGGATCATCACTCGCTTTTTCTaGTTGGCTTGTCCTGCTCCCCTGCAGACCACACAGGGCGATATG +
Preference number: 1 (lower is better)
Translates to: PSSTPAGTGIITRFF*LACPAPLQTTQGDM
Trigger: CATATCGCCCTGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAGTGATGATCCCTGTGCCTGCAGGAGTCGAGGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR TCA 90 bp GGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAAAGATCTTCCTaGACAGCTCCTCGGGGTCCACAGTGGGGCCTCCCTTCCAGTAGC +
Preference number: 1 (lower is better)
Translates to: GNLQMKRMRTRQRSS*TAPRGPQWGLPSSS
Trigger: GCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR GCA 90 bp TCTAACGACAGCCCGAAGATCCTGAAACACATGGAAACTGCGACATaGTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAA +
Preference number: 1 (lower is better)
Translates to: SNDSPKILKHMETAT*YQQRLGNGGSALTE
Trigger: TTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGCAGTTTCCATGTGTTTCAGGATCTTCGGGCTGTCGTTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR GCA 90 bp AAGAAGAGCCTGAGCTATAGAAATAAAGAGGTCGGAGTGGATGTCTaGGCCGTCCCTCCGGAACACAGGGCTTTTCTGCACCCTGAACGT +
Preference number: 1 (lower is better)
Translates to: KKSLSYRNKEVGVDV*AVPPEHRAFLHPER
Trigger: ACGTTCAGGGTGCAGAAAAGCCCTGTGTTCCGGAGGGACGGCGCAGACATCCACTCCGACCTCTTTATTTCTATAGCTCAGGCTCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR GCA 90 bp ACACGTGTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTaGAGCTTGATTGAATGTCAACTCCATGAAGTATTCCTGAGGCTG +
Preference number: 1 (lower is better)
Translates to: TRVHDVHGELLVDPL*SLIECQLHEVFLRL
Trigger: CAGCCTCAGGAATACTTCATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATGGACACGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR CCA 90 bp AAACCTCATAGGCTTCTGCCAGCTGGGAGAACTTCTCCTTGGCTTTaGGATCATCCTTATTTGTGTCAGGGTGATACTTCTTGGCAAGCT +
Preference number: 1 (lower is better)
Translates to: KPHRLLPAGRTSPWL*DHPYLCQGDTSWQA
Trigger: AGCTTGCCAAGAAGTATCACCCTGACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCCAGCTGGCAGAAGCCTATGAGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR CCA 90 bp CACTCAAAACCTCATAGGCTTCTGCCAGCTGGGAGAACTTCTCCTTaGCTTTGGGATCATCCTTATTTGTGTCAGGGTGATACTTCTTGG +
Preference number: 1 (lower is better)
Translates to: HSKPHRLLPAGRTSP*LWDHPYLCQGDTSW
Trigger: CCAAGAAGTATCACCCTGACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCCAGCTGGCAGAAGCCTATGAGGTTTTGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR-3UTR CCA 90 bp CCAGGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGGTCTCCCAGGTGCCCTaGCCCTTGGAGGGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: PGALALGGAAASRPSFQWVSQVP*PLEGLL
Trigger: CAGCAGCCCCTCCAAGGGCCAGGGCACCTGGGAGAC...CCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000576911.5
ENST00000612103.4
ENST00000615114.2
3UTR-3UTR GCA 90 bp CTGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGACCAGCCTCTGGGGCTaGATCCTACTGCCCGGGCTG +
Preference number: 2 (lower is better)
Translates to: LGLYVPPRHRLCSCLVPRTSLWG*ILLPGL
Trigger: CAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGT...CCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR TCA 90 bp GGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGAACCATCTCCCTCTGCCTaGGCCAGGGGCCGTCACCTA +
Preference number: 2 (lower is better)
Translates to: GLYVPPRHRLCSCLVPREPSPSA*ARGRHL
Trigger: TAGGTGACGGCCCCTGGCTCAGGCAGAGGGAGATGG...TTCCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp CTCCTCGGGGTCCACAGTGGGGCCTCCCTTCCAGTAGCTATGCTGGGAGCCGCTCGGGCTCGTTCCCCTTaGCGTTGCAGCGCTCACACG +
Preference number: 2 (lower is better)
Translates to: LLGVHSGASLPVAMLGAARARSP*RCSAHT
Trigger: CGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCG...AGCGGCTCCCAGCATAGCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR-3UTR CCA 90 bp TGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGACTGCCACCAGCCTCTaGGGCTGCATCCTACTGCCC +
Preference number: 2 (lower is better)
Translates to: WASTCLPGTDCAAAWYPGTATSL*GCILLP
Trigger: GGGCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGT...CCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR TCA 90 bp AGAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGCCGGGCTGTCCACTGTaGCCTTTCCGTGGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: RAADASAGPLIRGGRCWWPGCPL*PFRGER
Trigger: CCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGG...CCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR TCA 90 bp GGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGATCCCGGGCTGTCCACTGTaGCCTTTCCGTGGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: GALALGGAAASRPSFQWIPGCPL*PFRGER
Trigger: CCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGG...GATCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000576911.5
ENST00000612103.4
ENST00000615114.2
3UTR-3UTR CCA 90 bp CTGAGCCAGGGGCCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGTCTCCCAGGTGCCCTaGCCCTTGGAGGGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: LSQGPSPTNGQETATSLWVSQVP*PLEGLL
Trigger: CAGCAGCCCCTCCAAGGGCCAGGGCACCTGGGAGAC...CCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGCCCCTGGCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR CCA 90 bp TGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTGGCGGCCATCCCGGATaGGGTGGGAGCAAGGACTGT +
Preference number: 2 (lower is better)
Translates to: CCCQGRPEALRVGAQCCCGGHPG*GGSKDC
Trigger: ACAGTCCTTGCTCCCACCCCATCCGGGATGGCCGCC...ACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR TCA 90 bp GGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGAAGCCCCACGCTCCCAGTaGAGACAACCTGTCAGGAAG +
Preference number: 2 (lower is better)
Translates to: GLYVPPRHRLCSCLVPREAPRSQ*RQPVRK
Trigger: CTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGGGC...TTCCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp TGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTCTAACCATCTCCCTCTaGCTGAGCCAGGGGCCGTCA +
Preference number: 2 (lower is better)
Translates to: CCCQGRPEALRVGAQCCCLTISL*LSQGPS
Trigger: TGACGGCCCCTGGCTCAGGCAGAGGGAGATGGTTAG...ACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR GCA 90 bp TTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGCTAACCATCTCCCTCTaGCTGAGCCAGGGGCCGTCA +
Preference number: 2 (lower is better)
Translates to: LLLPRPSRGSAGGSSVLLLTISL*LSQGPS
Trigger: TGACGGCCCCTGGCTCAGGCAGAGGGAGATGGTTAG...CAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR GCA 90 bp ATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCCCAGGCACCGACTGTaGAGCTGCTTGGTACCCCGG +
Preference number: 2 (lower is better)
Translates to: ILLLPRPSRGSAGGSSVLPRHRL*SCLVPR
Trigger: CCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGG...CAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp CCCAAGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCCTCTGGGCCTCTACGTaGCTCCCAGGCACCGACTGT +
Preference number: 2 (lower is better)
Translates to: PKAAEVWPAQCCNGLWLSLWAST*LPGTDC
Trigger: ACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAGAG...GCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp CTCCTCGGGGTCCACAGTGGGGCCTCCCTTCCAGTAGCTATGCTGGGAGCCGCTCCCAGGATCGAAGCCTaGAGAGCCGTAGGCATCGTA +
Preference number: 2 (lower is better)
Translates to: LLGVHSGASLPVAMLGAAPRIEA*RAVGIV
Trigger: TACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGG...AGCGGCTCCCAGCATAGCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR CCA 90 bp TCAGTTCCCAAGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGAGGTGCCCTGGCCCTTaGAGGGGCTGCTGCTTCCCG +
Preference number: 2 (lower is better)
Translates to: SVPKAAEVWPAQCCNGLWRCPGP*RGCCFP
Trigger: CGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCT...CCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTTGGGAACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp CCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGCAGAGGCTCTGCGGGTaGGAGCTCAGTGCTGCTGTT +
Preference number: 2 (lower is better)
Translates to: PLGLHPTARAVHCDLSVEQRLCG*ELSAAV
Trigger: AACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTG...CTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR CCA 90 bp CTGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGCCGTCACCTACCAATaGACAGGAAACTGCCACCAG +
Preference number: 2 (lower is better)
Translates to: LGLYVPPRHRLCSCLVPRAVTYQ*TGNCHQ
Trigger: CTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGC...CCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp ACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCCGGATGGGGTGGGAGCACCCCCAGGGACTCTCTaGGCCTCTACGTGCCTCCCA +
Preference number: 2 (lower is better)
Translates to: TTGLNSQGQAAIPDGVGAPPGTL*ASTCLP
Trigger: TGGGAGGCACGTAGAGGCCCAGAGAGTCCCTGGGGG...TGCTCCCACCCCATCCGGGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp CCTGAACAGCTCCTCGGGGTCCACAGTGGGGCCTCCCTTCCAGTAGCTATGCTGTATGCTGGGAGCCGCTaGCCCCAGGATCGAAGCCTG +
Preference number: 2 (lower is better)
Translates to: PEQLLGVHSGASLPVAMLYAGSR*PQDRSL
Trigger: CAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATA...CAGCATAGCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGGAGCTGTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR GCA 90 bp ATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTCTGGGCCTCTACGTaGCTCCCAGGCACCGACTGT +
Preference number: 2 (lower is better)
Translates to: ILLLPRPSRGSAGGSSVLLWAST*LPGTDC
Trigger: ACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAGAG...CAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp CTGAGCCAGGGGCCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGTGGCCAGCACAGTGCTaGAATGGGCTGTGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: LSQGPSPTNGQETATSLWWPAQC*NGLWLS
Trigger: GCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCA...CCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGCCCCTGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp TTTCCATGCCGGAGCCGCCACAGTAGTGGCAATGCTGCACCTTGGTGCCGGGCTCGTTCCCCTTGCCGTTaGAGCGCTCACACGTGTCCA +
Preference number: 2 (lower is better)
Translates to: FPCRSRHSSGNAAPWCRARSPCR*SAHTCP
Trigger: TGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACG...AGCCCGGCACCAAGGTGCAGCATTGCCACTACTGTGGCGGCTCCGGCATGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR GCA 90 bp TGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGCGGGCTCGTTCCCCTTaGCGTTGCAGCGCTCACACG +
Preference number: 2 (lower is better)
Translates to: CILLPGLSTVTFPWREVLRARSP*RCSAHT
Trigger: CGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCG...CAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR CCA 90 bp CCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGGTCTCCCAGGTGCCCTaGCCCTTGGAGGGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: PWREVLSHDFAVAKAVQRVSQVP*PLEGLL
Trigger: CAGCAGCCCCTCCAAGGGCCAGGGCACCTGGGAGAC...CCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR CCA 90 bp GGTCAGAGCAGAACCCCCAGGGACTCTCTGGGCCTCTACGTGCCTCCCAGGCACTCAGTGCTGCTGTTCTaGAATCCTCCCGTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: GQSRTPRDSLGLYVPPRHSVLLF*NPPVSQ
Trigger: CTGGGAGACGGGAGGATTCCAGAACAGCAGCACTGA...GTGCCTGGGAGGCACGTAGAGGCCCAGAGAGTCCCTGGGGGTTCTGCTCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp GGGCTCGTTCCCCTTGCCGTTGCAGCGCTCACACGTGTCCATGATGTTCACGGTACTGCCACCAGCCTCTaGGGCTGCATCCTACTGCCC +
Preference number: 2 (lower is better)
Translates to: GLVPLAVAALTRVHDVHGTATSL*GCILLP
Trigger: GGGCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGT...ACCGTGAACATCATGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR CCA 90 bp TCAGTTCCCAAGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGGGCGGCCATCCCGGATaGGGTGGGAGCAAGGACTGT +
Preference number: 2 (lower is better)
Translates to: SVPKAAEVWPAQCCNGLWGGHPG*GGSKDC
Trigger: ACAGTCCTTGCTCCCACCCCATCCGGGATGGCCGCC...CCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTTGGGAACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp GGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGCATCGTACTGCTTCCTCTTCACTATGCTGGGAGCCGCTaGCCCCAGGATCGAAGCCTG +
Preference number: 2 (lower is better)
Translates to: GPRIEACRAVGIVLLPLHYAGSR*PQDRSL
Trigger: CAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATA...GTGAAGAGGAAGCAGTACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR TCA 90 bp TGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGCCGGGCTGTCCACTGTaGCCTTTCCGTGGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: CILLPGLSTVTFPWREVLPGCPL*PFRGER
Trigger: CCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGG...CAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR TCA 90 bp TGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGCCGGGCTGTCCACTGTaGCCTTTCCGTGGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: CCPMILLLPRPSRGSAGGPGCPL*PFRGER
Trigger: CCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGG...CCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR TCA 90 bp AGGACTGTACATCCTGACAAGGATCACCACCCACACGGTCAGAGCAGAACCCCCCCATCTCCCTCTGCCTaGGCCAGGGGCCGTCACCTA +
Preference number: 2 (lower is better)
Translates to: RTVHPDKDHHPHGQSRTPPSPSA*ARGRHL
Trigger: TAGGTGACGGCCCCTGGCTCAGGCAGAGGGAGATGG...GGGGGTTCTGCTCTGACCGTGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR TCA 90 bp ATGTCTGCGCCGTCCCTCCGGAACACAGGGCTTTTCTGCACCCTGAACGTAATGCCATCTCCCTCTGCCTaGGCCAGGGGCCGTCACCTA +
Preference number: 2 (lower is better)
Translates to: MSAPSLRNTGLFCTLNVMPSPSA*ARGRHL
Trigger: TAGGTGACGGCCCCTGGCTCAGGCAGAGGGAGATGG...CATTACGTTCAGGGTGCAGAAAAGCCCTGTGTTCCGGAGGGACGGCGCAGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR TCA 90 bp CTGCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATACTGAGCAGAGCAGCTaGTGCCTCGGCAGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: LRHATSRGWGMGVLLSLNTEQSS*CLGRAP
Trigger: AGGGGCCCTGCCGAGGCATCAGCTGCTCTGCTCAGT...ATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR TCA 90 bp AGAACCAAGCCCCTGACTAGCAACAGTGGCAGGGCTTCAGTTCCCAAGGCAGCTACTGAGCAGAGCAGCTaGTGCCTCGGCAGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: RTKPLTSNSGRASVPKAATEQSS*CLGRAP
Trigger: AGGGGCCCTGCCGAGGCATCAGCTGCTCTGCTCAGT...AGCTGCCTTGGGAACTGAAGCCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp AGAACCAAGCCCCTGACTAGCAACAGTGGCAGGGCTTCAGTTCCCAAGGCAGCTACCAGCCTCTGGGGCTaGATCCTACTGCCCGGGCTG +
Preference number: 2 (lower is better)
Translates to: RTKPLTSNSGRASVPKAATSLWG*ILLPGL
Trigger: CAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGT...AGCTGCCTTGGGAACTGAAGCCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp CCCTCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCAACCAGCCTCTGGGGCTaGATCCTACTGCCCGGGCTG +
Preference number: 2 (lower is better)
Translates to: PSMPGLQQQDSIVRDRRPTSLWG*ILLPGL
Trigger: CAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGT...TGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp CCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGACCAGCCTCTGGGGCTaGATCCTACTGCCCGGGCTG +
Preference number: 2 (lower is better)
Translates to: PWREVLSHDFAVAKAVQRTSLWG*ILLPGL
Trigger: CAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGT...CCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR GCA 90 bp ATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTAACCATCTCCCTCTaGCTGAGCCAGGGGCCGTCA +
Preference number: 2 (lower is better)
Translates to: ILLLPRPSRGSAGGSSVLLTISL*LSQGPS
Trigger: TGACGGCCCCTGGCTCAGGCAGAGGGAGATGGTTAG...CAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR GCA 90 bp CCTCGGGGTCCACAGTGGGGCCTCCCTTCCAGTAGCTATGCTGGGAGCCGCTGGAACCTCATAGGCTTCTaGCAGCTGGGAGAACTTCTC +
Preference number: 2 (lower is better)
Translates to: PRGPQWGLPSSSYAGSRWNLIGF*QLGELL
Trigger: GAGAAGTTCTCCCAGCTGGCAGAAGCCTATGAGGTT...CCAGCGGCTCCCAGCATAGCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR GCA 90 bp GGGCTCGTTCCCCTTGCCGTTGCAGCGCTCACACGTGTCCATGATGTTCACGGTCGTTCCCCTTGCCGTTaGAGCGCTCACACGTGTCCA +
Preference number: 2 (lower is better)
Translates to: GLVPLAVAALTRVHDVHGRSPCR*SAHTCP
Trigger: TGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACG...ACCGTGAACATCATGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000575106.5
ENST00000576911.5
ENST00000615114.2
ENST00000633082.1
3UTR-3UTR CCA 90 bp CCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGTCTCCCAGGTGCCCTaGCCCTTGGAGGGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: PTLPVKTTCQEELILEPPVSQVP*PLEGLL
Trigger: CAGCAGCCCCTCCAAGGGCCAGGGCACCTGGGAGAC...GGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp TTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTCAGTGCTGCTGTTCTaGAATCCTCCCGTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: LLLPRPSRGSAGGSSVLLSVLLF*NPPVSQ
Trigger: CTGGGAGACGGGAGGATTCCAGAACAGCAGCACTGA...CAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR CCA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATACTGCCACCAGCCTCTaGGGCTGCATCCTACTGCCC +
Preference number: 2 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDTATSL*GCILLP
Trigger: GGGCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGT...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR CCA 90 bp AGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCAGAAACTGCCACCAGCCTCTaGGGCTGCATCCTACTGCCC +
Preference number: 2 (lower is better)
Translates to: RQLKSGQHSAAMGCGSAETATSL*GCILLP
Trigger: GGGCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGT...TTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp GAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGGAGGAAGAACTCATTCTaGAACCTCCCGGAGGTTTGC +
Preference number: 2 (lower is better)
Translates to: EQLMPRQGPSLGEDGAGGRKNSF*NLPEVC
Trigger: GCAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCT...CCCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp TGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGAGGAAGAACTCATTCTaGAACCTCCCGGAGGTTTGC +
Preference number: 2 (lower is better)
Translates to: WASTCLPGTDCAAAWYPGRKNSF*NLPEVC
Trigger: GCAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCT...CCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp CACCAGCCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGGAGCCCTCCATGCCTaGCTTACAACAACAGGACTC +
Preference number: 2 (lower is better)
Translates to: HQPLGLHPTARAVHCDLSGALHA*LTTTGL
Trigger: GAGTCCTGTTGTTGTAAGCCAGGCATGGAGGGCTCC...GGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR TCA 90 bp GCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATGGGGAGAACCAAGCCCCTaGCTAGCAACAGTGGCAGGG +
Preference number: 2 (lower is better)
Translates to: ATCYQQRLGNGGSALTEWGEPSP*LATVAG
Trigger: CCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCTCC...CCATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp ATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCAATGGACAGGAAACTaGCACCAGCCTCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: ILLLPRPSRGSAGGSSVLQWTGN*HQPLGL
Trigger: CAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTG...CAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR GCA 90 bp GAGTGGATGTCTGCGCCGTCCCTCCGGAACACAGGGCTTTTCTGCACCCTGAACCAATGGACAGGAAACTaGCACCAGCCTCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: EWMSAPSLRNTGLFCTLNQWTGN*HQPLGL
Trigger: CAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTG...GTTCAGGGTGCAGAAAAGCCCTGTGTTCCGGAGGGACGGCGCAGACATCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR GCA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATTGGCCAGCACAGTGCTaGAATGGGCTGTGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDWPAQC*NGLWLS
Trigger: GCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCA...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp GCCAAAGATCTTCCTGAACAGCTCCTCGGGGTCCACAGTGGGGCCTCCCTTCCACCCAGGATCGAAGCCTaGAGAGCCGTAGGCATCGTA +
Preference number: 2 (lower is better)
Translates to: AKDLPEQLLGVHSGASLPPRIEA*RAVGIV
Trigger: TACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGG...TGGAAGGGAGGCCCCACTGTGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR CCA 90 bp CTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTAGGTGCCCTGGCCCTTaGAGGGGCTGCTGCTTCCCG +
Preference number: 2 (lower is better)
Translates to: LPVKTTCQEELILEPPGGRCPGP*RGCCFP
Trigger: CGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCT...ACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp TCAGTTCCCAAGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCAGAGGCTCTGCGGGTaGGAGCTCAGTGCTGCTGTT +
Preference number: 2 (lower is better)
Translates to: SVPKAAEVWPAQCCNGLWQRLCG*ELSAAV
Trigger: AACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTG...CCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTTGGGAACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp CTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTCAGAGGCTCTGCGGGTaGGAGCTCAGTGCTGCTGTT +
Preference number: 2 (lower is better)
Translates to: LHPTARAVHCDLSVERGVQRLCG*ELSAAV
Trigger: AACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTG...AACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR CCA 90 bp CTGCTTGGCTTGTCCTGCTCCCCTGCAGACCACACAGGGCGATATGATGATGGAGGCAATGCTGCACCTTaGTGCCGGGCTCGTTCCCCT +
Preference number: 2 (lower is better)
Translates to: LLGLSCSPADHTGRYDDGGNAAP*CRARSP
Trigger: AGGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCC...TCCATCATCATATCGCCCTGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR CAA 90 bp CTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTaGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: LLPGLSTVTFPWREV*SHDFAVAKAVQRLC
Trigger: GCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR TCA 90 bp AGAACCAAGCCCCTGACTAGCAACAGTGGCAGGGCTTCAGTTCCCAAGGCAGCTGCCCCACGCTCCCAGTaGAGACAACCTGTCAGGAAG +
Preference number: 2 (lower is better)
Translates to: RTKPLTSNSGRASVPKAAAPRSQ*RQPVRK
Trigger: CTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGGGC...AGCTGCCTTGGGAACTGAAGCCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR TCA 90 bp GCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATGGAGTTCCCAAGGCAGCTaGAGTCTGGCCAGCACAGTG +
Preference number: 2 (lower is better)
Translates to: ATCYQQRLGNGGSALTEWSSQGS*SLASTV
Trigger: CACTGTGCTGGCCAGACTTCAGCTGCCTTGGGAACT...CCATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR TCA 90 bp CTGCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATGGAGAACCAAGCCCCTaGCTAGCAACAGTGGCAGGG +
Preference number: 2 (lower is better)
Translates to: LRHATSRGWGMGVLLSLNGEPSP*LATVAG
Trigger: CCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCTCC...ATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp GCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATGGCGGGTGGGAGCTCAGTaGTGCTGTTCTGGAATCCTC +
Preference number: 2 (lower is better)
Translates to: ATCYQQRLGNGGSALTEWRVGAQ*CCSGIL
Trigger: GAGGATTCCAGAACAGCAGCACTGAGCTCCCACCCG...CCATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp GCCTGGGGGCCCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTCGGGTGGGAGCTCAGTaGTGCTGTTCTGGAATCCTC +
Preference number: 2 (lower is better)
Translates to: AWGPHAPSEDNLSGRTHSRVGAQ*CCSGIL
Trigger: GAGGATTCCAGAACAGCAGCACTGAGCTCCCACCCG...AGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGGGCCCCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATCGGGTGGGAGCTCAGTaGTGCTGTTCTGGAATCCTC +
Preference number: 2 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDRVGAQ*CCSGIL
Trigger: GAGGATTCCAGAACAGCAGCACTGAGCTCCCACCCG...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR GCA 90 bp CACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGCCGGGTGGGAGCTCAGTaGTGCTGTTCTGGAATCCTC +
Preference number: 2 (lower is better)
Translates to: HLPMDRKLPPASGAASYCRVGAQ*CCSGIL
Trigger: GAGGATTCCAGAACAGCAGCACTGAGCTCCCACCCG...GCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR GCA 90 bp CTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTACCAGCCTCTGGGGCTaGATCCTACTGCCCGGGCTG +
Preference number: 2 (lower is better)
Translates to: LPVKTTCQEELILEPPGGTSLWG*ILLPGL
Trigger: CAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGT...ACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp AGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCAGAACAATGGACAGGAAACTaGCACCAGCCTCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: RQLKSGQHSAAMGCGSAEQWTGN*HQPLGL
Trigger: CAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTG...TTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp TCTTTTTCCAGAGCTGGTGAGGGTGACGCCGTTCACCGTCCCCTCCACATCTGTCTAACCATCTCCCTCTaGCTGAGCCAGGGGCCGTCA +
Preference number: 2 (lower is better)
Translates to: SFSRAGEGDAVHRPLHICLTISL*LSQGPS
Trigger: TGACGGCCCCTGGCTCAGGCAGAGGGAGATGGTTAG...ACAGATGTGGAGGGGACGGTGAACGGCGTCACCCTCACCAGCTCTGGAAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR GCA 90 bp TCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCCTCTGGGCCTCTACGTaGCTCCCAGGCACCGACTGT +
Preference number: 2 (lower is better)
Translates to: SMPGLQQQDSIVRDRRPSLWAST*LPGTDC
Trigger: ACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAGAG...GGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp TGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGGGCAGGAGCCCTCCATaGCTGGCTTACAACAACAGG +
Preference number: 2 (lower is better)
Translates to: CILLPGLSTVTFPWREVLGRSPP*LAYNNR
Trigger: CCTGTTGTTGTAAGCCAGGCATGGAGGGCTCCTGCC...CAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp AGTAGCTATGCTGGGAGCCGCTGGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGAACCTCATAGGCTTCTaGCAGCTGGGAGAACTTCTC +
Preference number: 2 (lower is better)
Translates to: SSYAGSRWPQDRSLQSRRNLIGF*QLGELL
Trigger: GAGAAGTTCTCCCAGCTGGCAGAAGCCTATGAGGTT...CCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATAGCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR CCA 90 bp ACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCCGGATGGGGTGGGAGCATCAGTGCTGCTGTTCTaGAATCCTCCCGTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: TTGLNSQGQAAIPDGVGASVLLF*NPPVSQ
Trigger: CTGGGAGACGGGAGGATTCCAGAACAGCAGCACTGA...TGCTCCCACCCCATCCGGGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp AGAACCAAGCCCCTGACTAGCAACAGTGGCAGGGCTTCAGTTCCCAAGGCAGCTCAGAGGCTCTGCGGGTaGGAGCTCAGTGCTGCTGTT +
Preference number: 2 (lower is better)
Translates to: RTKPLTSNSGRASVPKAAQRLCG*ELSAAV
Trigger: AACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTG...AGCTGCCTTGGGAACTGAAGCCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp CACCAGCCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCAGGAAGAACTCATTCTaGAACCTCCCGGAGGTTTGC +
Preference number: 2 (lower is better)
Translates to: HQPLGLHPTARAVHCDLSRKNSF*NLPEVC
Trigger: GCAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCT...GGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp CACCAGCCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGACTGTGCAGCTGCTTaGTACCCCGGGAATAAAAAC +
Preference number: 2 (lower is better)
Translates to: HQPLGLHPTARAVHCDLSDCAAA*YPGNKN
Trigger: GTTTTTATTCCCGGGGTACCAAGCAGCTGCACAGTC...GGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp TGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTGCTGCAATGGGCTGTaGCTCAGCAGAAGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: CILLPGLSTVTFPWREVLCCNGL*LSRRAG
Trigger: TCCTGCCCTTCTGCTGAGCCACAGCCCATTGCAGCA...CAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp CATCTGTCTCGTCCTCGGCGTAGCTCAGGATCAGGCTCTGCTGCCGGCTCGTTACTCGCTTTTTCTGCTTaGCTTGTCCTGCTCCCCTGC +
Preference number: 2 (lower is better)
Translates to: HLSRPRRSSGSGSAAGSLLAFSA*LVLLPC
Trigger: GCAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAG...TAACGAGCCGGCAGCAGAGCCTGATCCTGAGCTACGCCGAGGACGAGACAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR TCA 90 bp TGGGAGCAAGGACTGTACATCCTGACAAGGATCACCACCCACACGGTCAGAGCAGCCCCACGCTCCCAGTaGAGACAACCTGTCAGGAAG +
Preference number: 2 (lower is better)
Translates to: WEQGLYILTRITTHTVRAAPRSQ*RQPVRK
Trigger: CTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGGGC...TGCTCTGACCGTGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTTGCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR TCA 90 bp TGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTCCCCCAAGAAGAGCCTaGGCTATAGAAATAAAGAGG +
Preference number: 2 (lower is better)
Translates to: CCCQGRPEALRVGAQCCCPPRRA*AIEIKR
Trigger: CCTCTTTATTTCTATAGCTCAGGCTCTTCTTGGGGG...ACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR GCA 90 bp AGGACTGTACATCCTGACAAGGATCACCACCCACACGGTCAGAGCAGAACCCCCCAATGGACAGGAAACTaGCACCAGCCTCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: RTVHPDKDHHPHGQSRTPQWTGN*HQPLGL
Trigger: CAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTG...GGGGGTTCTGCTCTGACCGTGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp TGGGAGCAAGGACTGTACATCCTGACAAGGATCACCACCCACACGGTCAGAGCACTAACCATCTCCCTCTaGCTGAGCCAGGGGCCGTCA +
Preference number: 2 (lower is better)
Translates to: WEQGLYILTRITTHTVRALTISL*LSQGPS
Trigger: TGACGGCCCCTGGCTCAGGCAGAGGGAGATGGTTAG...TGCTCTGACCGTGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTTGCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp CCAAATGAAGAGGATGAGAACTCGCCAAAGATCTTCCTGAACAGCTCCTCGGGGCGGGCTCGTTCCCCTTaGCGTTGCAGCGCTCACACG +
Preference number: 2 (lower is better)
Translates to: PNEEDENSPKIFLNSSSGRARSP*RCSAHT
Trigger: CGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCG...CCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTTCTCATCCTCTTCATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR-3UTR GCA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATAGGATCAGGCTCTGCTaGCGGCTCGTTAGCCTCTTT +
Preference number: 2 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDRIRLC*RLVSLF
Trigger: AAAGAGGCTAACGAGCCGGCAGCAGAGCCTGATCCT...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR CCA 90 bp TCTGCTCTCACTGAATGGTGGGGAACCTTCAACTGCTTAGCCTGTGCTTTCCTTAGGTGCCCTGGCCCTTaGAGGGGCTGCTGCTTCCCG +
Preference number: 2 (lower is better)
Translates to: SALTEWWGTFNCLACAFLRCPGP*RGCCFP
Trigger: CGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCT...AAGGAAAGCACAGGCTAAGCAGTTGAAGGTTCCCCACCATTCAGTGAGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATTCAGTGCTGCTGTTCTaGAATCCTCCCGTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDSVLLF*NPPVSQ
Trigger: CTGGGAGACGGGAGGATTCCAGAACAGCAGCACTGA...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR CCA 90 bp CCCAAGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCACTGTGACCTTTCCGTaGAGAGAGGTGTTGTCCCAT +
Preference number: 2 (lower is better)
Translates to: PKAAEVWPAQCCNGLWLSTVTFP*REVLSH
Trigger: ATGGGACAACACCTCTCTCCACGGAAAGGTCACAGT...GCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp TGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGGGAGCCCTCCATGCCTaGCTTACAACAACAGGACTC +
Preference number: 2 (lower is better)
Translates to: CCPMILLLPRPSRGSAGGGALHA*LTTTGL
Trigger: GAGTCCTGTTGTTGTAAGCCAGGCATGGAGGGCTCC...CCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATAGCACAGTGCTGCAATaGGCTGTGGCTCAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDSTVLQ*AVAQQK
Trigger: CTTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCT...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp CTCCTCGGGGTCCACAGTGGGGCCTCCCTTCCAGTAGCTATGCTGGGAGCCGCTGGGAGAACTTCTCCTTaGCTTTGGGATCATCCTTAT +
Preference number: 2 (lower is better)
Translates to: LLGVHSGASLPVAMLGAAGRTSP*LWDHPY
Trigger: ATAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCC...AGCGGCTCCCAGCATAGCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR CCA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATATAAAGAGGTCGGAGTaGATGTCTGCGCCGTCCCTC +
Preference number: 2 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDIKRSE*MSAPSL
Trigger: GAGGGACGGCGCAGACATCCACTCCGACCTCTTTAT...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR CAA 90 bp TCCTCGACTCCTGCAGGCACAGGGATCATCACTCGCTTTTTCTGCTaGGCTTGTCCTGCTCCCCTGCAGACCACACAGGGCGATATGATG +
Preference number: 2 (lower is better)
Translates to: SSTPAGTGIITRFFC*ACPAPLQTTQGDMM
Trigger: CATCATATCGCCCTGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAGTGATGATCCCTGTGCCTGCAGGAGTCGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR TCA 90 bp CCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTGCCGGGCTGTCCACTGTaGCCTTTCCGTGGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: PVKTTCQEELILEPPGGLPGCPL*PFRGER
Trigger: CCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGG...CAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp CTCCTACACGTGGAACGCATCACAAAAGGGCCTGTGTTGATGGTTTCCATGCCGCAGAGGCTCTGCGGGTaGGAGCTCAGTGCTGCTGTT +
Preference number: 2 (lower is better)
Translates to: LLHVERITKGPVLMVSMPQRLCG*ELSAAV
Trigger: AACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTG...CGGCATGGAAACCATCAACACAGGCCCTTTTGTGATGCGTTCCACGTGTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR CCA 90 bp ACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCCGGATGGGGTGGGAGCAACTGTGACCTTTCCGTaGAGAGAGGTGTTGTCCCAT +
Preference number: 2 (lower is better)
Translates to: TTGLNSQGQAAIPDGVGATVTFP*REVLSH
Trigger: ATGGGACAACACCTCTCTCCACGGAAAGGTCACAGT...TGCTCCCACCCCATCCGGGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp GAGTGGATGTCTGCGCCGTCCCTCCGGAACACAGGGCTTTTCTGCACCCTGAACCACATCTCCTACACGTaGAACGCATCACAAAAGGGC +
Preference number: 2 (lower is better)
Translates to: EWMSAPSLRNTGLFCTLNHISYT*NASQKG
Trigger: GCCCTTTTGTGATGCGTTCCACGTGTAGGAGATGTG...GTTCAGGGTGCAGAAAAGCCCTGTGTTCCGGAGGGACGGCGCAGACATCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR CCA 90 bp AGTAGCTATGCTGGGAGCCGCTGGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGTTCTTGATCTCTTTCTaGCTGGCATTTCGAGGCACT +
Preference number: 2 (lower is better)
Translates to: SSYAGSRWPQDRSLQSRRFLISF*LAFRGT
Trigger: AGTGCCTCGAAATGCCAGCCAGAAAGAGATCAAGAA...CCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATAGCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR CAA 90 bp GACTCCTGCAGGCACAGGGATCATCACTCGCTTTTTCTGCTTGGCTaGTCCTGCTCCCCTGCAGACCACACAGGGCGATATGATGATGGA +
Preference number: 2 (lower is better)
Translates to: DSCRHRDHHSLFLLG*SCSPADHTGRYDDG
Trigger: TCCATCATCATATCGCCCTGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAGTGATGATCCCTGTGCCTGCAGGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR GCA 90 bp CTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTCAATGGACAGGAAACTaGCACCAGCCTCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: LPVKTTCQEELILEPPGGQWTGN*HQPLGL
Trigger: CAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTG...ACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp TGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGATCACTCGCTTTTTCTaGTTGGCTTGTCCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: CCPMILLLPRPSRGSAGGITRFF*LACPAP
Trigger: GGGAGCAGGACAAGCCAAGCAGAAAAAGCGAGTGAT...CCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR CCA 90 bp TTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGGAAACTGCGGTCTCCCAGGTGCCCTaGCCCTTGGAGGGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: FINLSNDSPKILKHMETAVSQVP*PLEGLL
Trigger: CAGCAGCCCCTCCAAGGGCCAGGGCACCTGGGAGAC...CGCAGTTTCCATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp TGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTCAGTGCTGCTGTTCTaGAATCCTCCCGTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: WREVLSHDFAVAKAVQRLSVLLF*NPPVSQ
Trigger: CTGGGAGACGGGAGGATTCCAGAACAGCAGCACTGA...GAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR CCA 90 bp TCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCTCAGTGCTGCTGTTCTaGAATCCTCCCGTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: SMPGLQQQDSIVRDRRPSSVLLF*NPPVSQ
Trigger: CTGGGAGACGGGAGGATTCCAGAACAGCAGCACTGA...GGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp TCAGTTCCCAAGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGACTGTGACCTTTCCGTaGAGAGAGGTGTTGTCCCAT +
Preference number: 2 (lower is better)
Translates to: SVPKAAEVWPAQCCNGLWTVTFP*REVLSH
Trigger: ATGGGACAACACCTCTCTCCACGGAAAGGTCACAGT...CCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTTGGGAACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp CCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTAACTGTGACCTTTCCGTaGAGAGAGGTGTTGTCCCAT +
Preference number: 2 (lower is better)
Translates to: PSPTNGQETATSLWGCILTVTFP*REVLSH
Trigger: ATGGGACAACACCTCTCTCCACGGAAAGGTCACAGT...TAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR TCA 90 bp CACCAGCCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCAATCACTTCGTAACTTaGTGCAGCTTAAGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: HQPLGLHPTARAVHCDLSNHFVT*CSLRLH
Trigger: ATGAAGCCTTAAGCTGCATCAAGTTACGAAGTGATT...GGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR TCA 90 bp CTGCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATAAGGACTGTACATCCTaGCAAGGATCACCACCCACA +
Preference number: 2 (lower is better)
Translates to: LRHATSRGWGMGVLLSLNKDCTS*QGSPPT
Trigger: TGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTT...ATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp CCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTGCGGGTGGGAGCTCAGTaGTGCTGTTCTGGAATCCTC +
Preference number: 2 (lower is better)
Translates to: PVKTTCQEELILEPPGGLRVGAQ*CCSGIL
Trigger: GAGGATTCCAGAACAGCAGCACTGAGCTCCCACCCG...CAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp TTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGGAAACTGCGCCCAGGCACCGACTGTaGAGCTGCTTGGTACCCCGG +
Preference number: 2 (lower is better)
Translates to: FINLSNDSPKILKHMETAPRHRL*SCLVPR
Trigger: CCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGG...CGCAGTTTCCATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp TCCCTTCCAGTAGCTATGCTGGGAGCCGCTGGCCCCAGGATCGAAGCCTGCAGACAGGGTGATACTTCTTaGCAAGCTGATAATAGGCTT +
Preference number: 2 (lower is better)
Translates to: SLPVAMLGAAGPRIEACRQGDTS*QADNRL
Trigger: AAGCCTATTATCAGCTTGCCAAGAAGTATCACCCTG...TCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATAGCTACTGGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR-3UTR TCA 90 bp TGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGGGAATAAAAACTAACTaGGCAGAGCAGCTGATGCCT +
Preference number: 2 (lower is better)
Translates to: CCPMILLLPRPSRGSAGGGIKTN*AEQLMP
Trigger: AGGCATCAGCTGCTCTGCTCAGTTAGTTTTTATTCC...CCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR TCA 90 bp AACTCGCCAAAGATCTTCCTGAACAGCTCCTCGGGGTCCACAGTGGGGCCTCCCGATAATAGGCTTTCTTaGTCTCTTTCTGGCTGGCAT +
Preference number: 2 (lower is better)
Translates to: NSPKIFLNSSSGSTVGPPDNRLS*SLSGWH
Trigger: ATGCCAGCCAGAAAGAGATCAAGAAAGCCTATTATC...GGGAGGCCCCACTGTGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR-3UTR GCA 90 bp GAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGCCCAGGCACCGACTGTaGAGCTGCTTGGTACCCCGG +
Preference number: 2 (lower is better)
Translates to: EVFFINLSNDSPKILKHMPRHRL*SCLVPR
Trigger: CCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGG...CATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp ACATCTCCTACACGTGGAACGCATCACAAAAGGGCCTGTGTTGATGGTTTCCATAATGCTGCACCTTGGTaGCGGGCTCGTTCCCCTTGC +
Preference number: 2 (lower is better)
Translates to: TSPTRGTHHKRACVDGFHNAAPW*RARSPC
Trigger: GCAAGGGGAACGAGCCCGGCACCAAGGTGCAGCATT...ATGGAAACCATCAACACAGGCCCTTTTGTGATGCGTTCCACGTGTAGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR GCA 90 bp GGGCTCGTTCCCCTTGCCGTTGCAGCGCTCACACGTGTCCATGATGTTCACGGTCTTGTTGACCCCCTTTaGAGCTTGATTGAATGTCAA +
Preference number: 2 (lower is better)
Translates to: GLVPLAVAALTRVHDVHGLVDPL*SLIECQ
Trigger: TTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAG...ACCGTGAACATCATGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR-3UTR CCA 90 bp TTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGGAAACTGCGACTGCCACCAGCCTCTaGGGCTGCATCCTACTGCCC +
Preference number: 2 (lower is better)
Translates to: FINLSNDSPKILKHMETATATSL*GCILLP
Trigger: GGGCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGT...CGCAGTTTCCATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp GATCAAACACGGTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAAAGACCTCGGGGTCCACAGTaGGGCCTCCCTTCCAGTAGC +
Preference number: 2 (lower is better)
Translates to: DQTRSGNLQMKRMRTRQRPRGPQ*GLPSSS
Trigger: GCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGG...TCTTTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGACCGTGTTTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR TCA 90 bp GCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCAGAAGGAATCACTTCGTAACTTaGTGCAGCTTAAGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: AAEVWPAQCCNGLWLSRRNHFVT*CSLRLH
Trigger: ATGAAGCCTTAAGCTGCATCAAGTTACGAAGTGATT...CCTTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp GAAGCCTGCAGAGCCGTAGGCATCGTACTGCTTCCTCTTCACCTCATCACTCAAAACCTCATAGGCTTCTaGCAGCTGGGAGAACTTCTC +
Preference number: 2 (lower is better)
Translates to: EACRAVGIVLLPLHLITQNLIGF*QLGELL
Trigger: GAGAAGTTCTCCCAGCTGGCAGAAGCCTATGAGGTT...TTGAGTGATGAGGTGAAGAGGAAGCAGTACGATGCCTACGGCTCTGCAGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR GCA 90 bp ACACGGTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAAAGATCTTCCCGTTCCCCTTGCCGTTaGAGCGCTCACACGTGTCCA +
Preference number: 2 (lower is better)
Translates to: TRSGNLQMKRMRTRQRSSRSPCR*SAHTCP
Trigger: TGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACG...GGAAGATCTTTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGACCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR-3UTR CCA 90 bp GTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTGCTGCGGCCTAGTTTCCAGTaGATCTTTTTCCTCGGCTGG +
Preference number: 2 (lower is better)
Translates to: VKTTCQEELILEPPGGLLRPSFQ*IFFLGW
Trigger: CCAGCCGAGGAAAAAGATCCACTGGAAACTAGGCCG...CAGCAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
3UTR-3UTR CCA 90 bp TCTGCTCTCACTGAATGGTGGGGAACCTTCAACTGCTTAGCCTGTGCTTTCCTTGCCGTCACCTACCAATaGACAGGAAACTGCCACCAG +
Preference number: 2 (lower is better)
Translates to: SALTEWWGTFNCLACAFLAVTYQ*TGNCHQ
Trigger: CTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGC...AAGGAAAGCACAGGCTAAGCAGTTGAAGGTTCCCCACCATTCAGTGAGAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp TCTGCTCTCACTGAATGGTGGGGAACCTTCAACTGCTTAGCCTGTGCTTTCCTTGGAGCCCTCCATGCCTaGCTTACAACAACAGGACTC +
Preference number: 2 (lower is better)
Translates to: SALTEWWGTFNCLACAFLGALHA*LTTTGL
Trigger: GAGTCCTGTTGTTGTAAGCCAGGCATGGAGGGCTCC...AAGGAAAGCACAGGCTAAGCAGTTGAAGGTTCCCCACCATTCAGTGAGAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp TGCAGCTTGATTGAATGTCAACTCCATGAAGTATTCCTGAGGCTGATCAAACACCCTCGGGGTCCACAGTaGGGCCTCCCTTCCAGTAGC +
Preference number: 2 (lower is better)
Translates to: CSLIECQLHEVFLRLIKHPRGPQ*GLPSSS
Trigger: GCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGG...GTGTTTGATCAGCCTCAGGAATACTTCATGGAGTTGACATTCAATCAAGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR CCA 90 bp GGGCTCGTTCCCCTTGCCGTTGCAGCGCTCACACGTGTCCATGATGTTCACGGTACTTCTCCTTGGCTTTaGGATCATCCTTATTTGTGT +
Preference number: 2 (lower is better)
Translates to: GLVPLAVAALTRVHDVHGTSPWL*DHPYLC
Trigger: ACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGT...ACCGTGAACATCATGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR-3UTR GCA 90 bp GAAACTGTTGAGAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGGCCAGCACAGTGCTaGAATGGGCTGTGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: ETVEKCSSLTCLTTARRSWPAQC*NGLWLS
Trigger: GCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCA...GGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTCTCAACAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp CTTCGTAACTTGATGCAGCTTAAGGCTTCATTTCTAAGCTGTAAGCATGGCCTTGTCGGAGTGGATGTCTaGGCCGTCCCTCCGGAACAC +
Preference number: 2 (lower is better)
Translates to: LRNLMQLKASFLSCKHGLVGVDV*AVPPEH
Trigger: GTGTTCCGGAGGGACGGCGCAGACATCCACTCCGAC...AAGGCCATGCTTACAGCTTAGAAATGAAGCCTTAAGCTGCATCAAGTTACGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR TCA 90 bp CTTCGTAACTTGATGCAGCTTAAGGCTTCATTTCTAAGCTGTAAGCATGGCCTTGCCCCACGCTCCCAGTaGAGACAACCTGTCAGGAAG +
Preference number: 2 (lower is better)
Translates to: LRNLMQLKASFLSCKHGLAPRSQ*RQPVRK
Trigger: CTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGGGC...AAGGCCATGCTTACAGCTTAGAAATGAAGCCTTAAGCTGCATCAAGTTACGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR TCA 90 bp GTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAAAGATCTTCCTGAACCGCCAAAGATCTTCCTaGACAGCTCCTCGGGGTCCA +
Preference number: 2 (lower is better)
Translates to: VWKSPNEEDENSPKIFLNRQRSS*TAPRGP
Trigger: TGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCG...GTTCAGGAAGATCTTTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR GCA 90 bp GAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGCAATGGACAGGAAACTaGCACCAGCCTCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: EVFFINLSNDSPKILKHMQWTGN*HQPLGL
Trigger: CAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTG...CATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR GCA 90 bp GTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAAAGATCTTCCTGAACCCCAGGATCGAAGCCTaGAGAGCCGTAGGCATCGTA +
Preference number: 2 (lower is better)
Translates to: VWKSPNEEDENSPKIFLNPRIEA*RAVGIV
Trigger: TACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGG...GTTCAGGAAGATCTTTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR CCA 90 bp TCTGCTCTCACTGAATGGTGGGGAACCTTCAACTGCTTAGCCTGTGCTTTCCTTACTGTGACCTTTCCGTaGAGAGAGGTGTTGTCCCAT +
Preference number: 2 (lower is better)
Translates to: SALTEWWGTFNCLACAFLTVTFP*REVLSH
Trigger: ATGGGACAACACCTCTCTCCACGGAAAGGTCACAGT...AAGGAAAGCACAGGCTAAGCAGTTGAAGGTTCCCCACCATTCAGTGAGAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp GCCTGCAGAGCCGTAGGCATCGTACTGCTTCCTCTTCACCTCATCACTCAAAACTTCTTGATCTCTTTCTaGCTGGCATTTCGAGGCACT +
Preference number: 2 (lower is better)
Translates to: ACRAVGIVLLPLHLITQNFLISF*LAFRGT
Trigger: AGTGCCTCGAAATGCCAGCCAGAAAGAGATCAAGAA...GTTTTGAGTGATGAGGTGAAGAGGAAGCAGTACGATGCCTACGGCTCTGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR-3UTR TCA 90 bp GAAGAGGATGAGAACTCGCCAAAGATCTTCCTGAACAGCTCCTCGGGGTCCACAGATAATAGGCTTTCTTaGTCTCTTTCTGGCTGGCAT +
Preference number: 2 (lower is better)
Translates to: EEDENSPKIFLNSSSGSTDNRLS*SLSGWH
Trigger: ATGCCAGCCAGAAAGAGATCAAGAAAGCCTATTATC...TGTGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTTCTCATCCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR-3UTR CCA 90 bp AATATTCAATTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCCCCCAGGGACTCTCTaGGCCTCTACGTGCCTCCCA +
Preference number: 2 (lower is better)
Translates to: NIQFQIRVLALQESNHLPPPGTL*ASTCLP
Trigger: TGGGAGGCACGTAGAGGCCCAGAGAGTCCCTGGGGG...AGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAATTGAATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp GAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGAGCACAGTGCTGCAATaGGCTGTGGCTCAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: EVFFINLSNDSPKILKHMSTVLQ*AVAQQK
Trigger: CTTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCT...CATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR TCA 90 bp TTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGGAAACTGCGAAGGACTGTACATCCTaGCAAGGATCACCACCCACA +
Preference number: 2 (lower is better)
Translates to: FINLSNDSPKILKHMETAKDCTS*QGSPPT
Trigger: TGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTT...CGCAGTTTCCATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp TTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTGAGACTGTGACCTTTCCGTaGAGAGAGGTGTTGTCCCAT +
Preference number: 2 (lower is better)
Translates to: FQIRVLALQESNHLPLPETVTFP*REVLSH
Trigger: ATGGGACAACACCTCTCTCCACGGAAAGGTCACAGT...CTCAGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR CCA 90 bp TTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGGAAACTGCGGACTGTGCAGCTGCTTaGTACCCCGGGAATAAAAAC +
Preference number: 2 (lower is better)
Translates to: FINLSNDSPKILKHMETADCAAA*YPGNKN
Trigger: GTTTTTATTCCCGGGGTACCAAGCAGCTGCACAGTC...CGCAGTTTCCATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp TTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGGAAACTGCGTCTGCTCTCACTGAATaGTGGGGAACCTTCAACTGC +
Preference number: 2 (lower is better)
Translates to: FINLSNDSPKILKHMETASALTE*WGTFNC
Trigger: GCAGTTGAAGGTTCCCCACCATTCAGTGAGAGCAGA...CGCAGTTTCCATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR TCA 90 bp CCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTGAATCACTTCGTAACTTaGTGCAGCTTAAGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: PVKTTCQEELILEPPGGLNHFVT*CSLRLH
Trigger: ATGAAGCCTTAAGCTGCATCAAGTTACGAAGTGATT...CAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp GAAACTGTTGAGAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCGACTGTGCAGCTGCTTaGTACCCCGGGAATAAAAAC +
Preference number: 2 (lower is better)
Translates to: ETVEKCSSLTCLTTARRSDCAAA*YPGNKN
Trigger: GTTTTTATTCCCGGGGTACCAAGCAGCTGCACAGTC...GGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTCTCAACAGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp CTTCGTAACTTGATGCAGCTTAAGGCTTCATTTCTAAGCTGTAAGCATGGCCTTAAGGCAGCTGAAGTCTaGCCAGCACAGTGCTGCAAT +
Preference number: 2 (lower is better)
Translates to: LRNLMQLKASFLSCKHGLKAAEV*PAQCCN
Trigger: ATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTT...AAGGCCATGCTTACAGCTTAGAAATGAAGCCTTAAGCTGCATCAAGTTACGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR CAA 90 bp GTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTGCAGCTaGATTGAATGTCAACTCCATGAAGTATTCCTGAGGCTGATCAAA +
Preference number: 2 (lower is better)
Translates to: VHDVHGELLVDPLCS*IECQLHEVFLRLIK
Trigger: TTTGATCAGCCTCAGGAATACTTCATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR-3UTR CCA 90 bp CTTCGTAACTTGATGCAGCTTAAGGCTTCATTTCTAAGCTGTAAGCATGGCCTTGACTGTGCAGCTGCTTaGTACCCCGGGAATAAAAAC +
Preference number: 2 (lower is better)
Translates to: LRNLMQLKASFLSCKHGLDCAAA*YPGNKN
Trigger: GTTTTTATTCCCGGGGTACCAAGCAGCTGCACAGTC...AAGGCCATGCTTACAGCTTAGAAATGAAGCCTTAAGCTGCATCAAGTTACGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp CTTCGTAACTTGATGCAGCTTAAGGCTTCATTTCTAAGCTGTAAGCATGGCCTTGCTCTCACTGAATGGTaGGGAACCTTCAACTGCTTA +
Preference number: 2 (lower is better)
Translates to: LRNLMQLKASFLSCKHGLALTEW*GTFNCL
Trigger: TAAGCAGTTGAAGGTTCCCCACCATTCAGTGAGAGC...AAGGCCATGCTTACAGCTTAGAAATGAAGCCTTAAGCTGCATCAAGTTACGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CCA 90 bp GATCAAACACGGTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAAAGAGGGAGAACTTCTCCTTaGCTTTGGGATCATCCTTAT +
Preference number: 2 (lower is better)
Translates to: DQTRSGNLQMKRMRTRQRGRTSP*LWDHPY
Trigger: ATAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCC...TCTTTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGACCGTGTTTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR CCA 90 bp AATATTCAATTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCGGCCTAGTTTCCAGTaGATCTTTTTCCTCGGCTGG +
Preference number: 2 (lower is better)
Translates to: NIQFQIRVLALQESNHLPRPSFQ*IFFLGW
Trigger: CCAGCCGAGGAAAAAGATCCACTGGAAACTAGGCCG...AGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAATTGAATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
3UTR-3UTR CCA 90 bp TGCAGCTTGATTGAATGTCAACTCCATGAAGTATTCCTGAGGCTGATCAAACACGGGAGAACTTCTCCTTaGCTTTGGGATCATCCTTAT +
Preference number: 2 (lower is better)
Translates to: CSLIECQLHEVFLRLIKHGRTSP*LWDHPY
Trigger: ATAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCC...GTGTTTGATCAGCCTCAGGAATACTTCATGGAGTTGACATTCAATCAAGCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR CCA 90 bp ACGGTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAAAGATCTTCCTGACTTCTCCTTGGCTTTaGGATCATCCTTATTTGTGT +
Preference number: 2 (lower is better)
Translates to: TVWKSPNEEDENSPKIFLTSPWL*DHPYLC
Trigger: ACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGT...CAGGAAGATCTTTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGACCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR-3UTR CCA 90 bp TGCAGCTTGATTGAATGTCAACTCCATGAAGTATTCCTGAGGCTGATCAAACACCAGGGTGATACTTCTTaGCAAGCTGATAATAGGCTT +
Preference number: 2 (lower is better)
Translates to: CSLIECQLHEVFLRLIKHQGDTS*QADNRL
Trigger: AAGCCTATTATCAGCTTGCCAAGAAGTATCACCCTG...GTGTTTGATCAGCCTCAGGAATACTTCATGGAGTTGACATTCAATCAAGCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR GCA 72 bp CGGAGCCGCCACAGTAGTGGCAATGCTGCACCTTGGTaGCGGGCTCGTTCCCCTTGCCGTTGCAGCGCTCAC +
Preference number: 3 (lower is better)
Translates to: RSRHSSGNAAPW*RARSPCRCSAH
Trigger: GTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCCACTACTGTGGCGGCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR CCA 72 bp TGCCGGAGCCGCCACAGTAGTGGCAATGCTGCACCTTaGTGCCGGGCTCGTTCCCCTTGCCGTTGCAGCGCT +
Preference number: 3 (lower is better)
Translates to: CRSRHSSGNAAP*CRARSPCRCSA
Trigger: AGCGCTGCAACGGCAAGGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCCACTACTGTGGCGGCTCCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR CAA 90 bp CACCAGCCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCTGGCAATGCTGCACCTaGGTGCCGGGCTCGTTCCCC +
Preference number: 3 (lower is better)
Translates to: HQPLGLHPTARAVHCDLSWQCCT*VPGSFP
Trigger: GGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCCA...GGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR GCA 72 bp CAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTaGTGCTGTTCTGGAATCCTCCCGTCTCCCAGGTGC +
Preference number: 3 (lower is better)
Translates to: QGRPEALRVGAQ*CCSGILPSPRC
Trigger: GCACCTGGGAGACGGGAGGATTCCAGAACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR GCA 72 bp GAGCCAGGGGCCGTCACCTACCAATGGACAGGAAACTaGCACCAGCCTCTGGGGCTGCATCCTACTGCCCGG +
Preference number: 3 (lower is better)
Translates to: EPGAVTYQWTGN*HQPLGLHPTAR
Trigger: CCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGCCCCTGGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR CCA 72 bp ACCCACACGGTCAGAGCAGAACCCCCAGGGACTCTCTaGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCA +
Preference number: 3 (lower is better)
Translates to: THTVRAEPPGTL*ASTCLPGTDCA
Trigger: TGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAGAGAGTCCCTGGGGGTTCTGCTCTGACCGTGTGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR CCA 72 bp TGGGGCCTCCCTTCCAGTAGCTATGCTGGGAGCCGCTaGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGCAT +
Preference number: 3 (lower is better)
Translates to: WGLPSSSYAGSR*PQDRSLQSRRH
Trigger: ATGCCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATAGCTACTGGAAGGGAGGCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR CAA 90 bp GGGCTCGTTCCCCTTGCCGTTGCAGCGCTCACACGTGTCCATGATGTTCACGGTCCGGGCTCGTTCCCCTaGCCGTTGCAGCGCTCACAC +
Preference number: 3 (lower is better)
Translates to: GLVPLAVAALTRVHDVHGPGSFP*PLQRSH
Trigger: GTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGG...ACCGTGAACATCATGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000575106.5
ENST00000576911.5
ENST00000615114.2
ENST00000633082.1
3UTR-3UTR CAA 90 bp GGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGCATCGTACTGCTTCCTCTTCACCCGGGCTCGTTCCCCTaGCCGTTGCAGCGCTCACAC +
Preference number: 3 (lower is better)
Translates to: GPRIEACRAVGIVLLPLHPGSFP*PLQRSH
Trigger: GTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGG...GTGAAGAGGAAGCAGTACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR GCA 72 bp AGAGCAGAACCCCCAGGGACTCTCTGGGCCTCTACGTaGCTCCCAGGCACCGACTGTGCAGCTGCTTGGTAC +
Preference number: 3 (lower is better)
Translates to: RAEPPGTLWAST*LPGTDCAAAWY
Trigger: GTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAGAGAGTCCCTGGGGGTTCTGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CAA 90 bp CTGCTTGGCTTGTCCTGCTCCCCTGCAGACCACACAGGGCGATATGATGATGGACCGGGCTCGTTCCCCTaGCCGTTGCAGCGCTCACAC +
Preference number: 3 (lower is better)
Translates to: LLGLSCSPADHTGRYDDGPGSFP*PLQRSH
Trigger: GTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGG...TCCATCATCATATCGCCCTGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR GCA 72 bp GCTATGCTGGGAGCCGCTGGCCCCAGGATCGAAGCCTaGAGAGCCGTAGGCATCGTACTGCTTCCTCTTCAC +
Preference number: 3 (lower is better)
Translates to: AMLGAAGPRIEA*RAVGIVLLPLH
Trigger: GTGAAGAGGAAGCAGTACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR CAA 90 bp ATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCTCGTTCCCCTTGCCGTaGCAGCGCTCACACGTGTCC +
Preference number: 3 (lower is better)
Translates to: ILLPGLSTVTFPWREVLSSFPLP*QRSHVS
Trigger: GGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGA...GGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR CAA 90 bp GTGGAACGCATCACAAAAGGGCCTGTGTTGATGGTTTCCATGCCGGAGCCGCCATGGCAATGCTGCACCTaGGTGCCGGGCTCGTTCCCC +
Preference number: 3 (lower is better)
Translates to: VERITKGPVLMVSMPEPPWQCCT*VPGSFP
Trigger: GGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCCA...TGGCGGCTCCGGCATGGAAACCATCAACACAGGCCCTTTTGTGATGCGTTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR CAA 90 bp CTGCTTGGCTTGTCCTGCTCCCCTGCAGACCACACAGGGCGATATGATGATGGATCGTTCCCCTTGCCGTaGCAGCGCTCACACGTGTCC +
Preference number: 3 (lower is better)
Translates to: LLGLSCSPADHTGRYDDGSFPLP*QRSHVS
Trigger: GGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGA...TCCATCATCATATCGCCCTGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR CAA 90 bp TGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGCCCATGATTTTGCTGTaGCCAAGGCCGTCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: CCPMILLLPRPSRGSAGGPMILL*PRPSRG
Trigger: GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGG...CCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR CAA 90 bp GGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGATCGAACCTCCCGGAGGTTaGCTGAGAAGGAAATTAATC +
Preference number: 3 (lower is better)
Translates to: GALALGGAAASRPSFQWIEPPGG*LRRKLI
Trigger: GATTAATTTCCTTCTCAGCAAACCTCCGGGAGGTTC...GATCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
3UTR-3UTR CAA 90 bp ATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGACTCGCTTTTTCTGCTaGGCTTGTCCTGCTCCCCTG +
Preference number: 3 (lower is better)
Translates to: ILLLPRPSRGSAGGSSVLTRFFC*ACPAPL
Trigger: CAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAGT...CAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR CAA 90 bp AGTAGCTATGCTGGGAGCCGCTGGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGTGGGAGAACTTCTCCTaGGCTTTGGGATCATCCTTA +
Preference number: 3 (lower is better)
Translates to: SSYAGSRWPQDRSLQSRRWENFS*ALGSSL
Trigger: TAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCCA...CCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATAGCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR CAA 90 bp GAGTGGATGTCTGCGCCGTCCCTCCGGAACACAGGGCTTTTCTGCACCCTGAACTTCACGGTGAACTCCTaGTTGACCCCCTTTGCAGCT +
Preference number: 3 (lower is better)
Translates to: EWMSAPSLRNTGLFCTLNFTVNS*LTPFAA
Trigger: AGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAA...GTTCAGGGTGCAGAAAAGCCCTGTGTTCCGGAGGGACGGCGCAGACATCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR CAA 90 bp CCCTTTTTCCCACAGGCATCCTCACGGTCTGGCCATCCTCGACTCCTGCAGGCATTCACGGTGAACTCCTaGTTGACCCCCTTTGCAGCT +
Preference number: 3 (lower is better)
Translates to: PFFPQASSRSGHPRLLQAFTVNS*LTPFAA
Trigger: AGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAA...TGCCTGCAGGAGTCGAGGATGGCCAGACCGTGAGGATGCCTGTGGGAAAAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR CAA 90 bp CAGGGCGATATGATGATGGAGCCGCGGCCACCACATCTCCTACACGTGGAACGCACAAAAGGGCCTGTGTaGATGGTTTCCATGCCGGAG +
Preference number: 3 (lower is better)
Translates to: QGDMMMEPRPPHLLHVERTKGPV*MVSMPE
Trigger: CTCCGGCATGGAAACCATCAACACAGGCCCTTTTGT...GCGTTCCACGTGTAGGAGATGTGGTGGCCGCGGCTCCATCATCATATCGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR TCA 72 bp TCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTaGCCTTTCCGTGGAGAGAGGTGTTGTCCCATGATT +
Preference number: 3 (lower is better)
Translates to: SGAASYCPGCPL*PFRGERCCPMI
Trigger: AATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR TCA 72 bp CATCCCGGATGGGGTGGGAGCAAGGACTGTACATCCTaGCAAGGATCACCACCCACACGGTCAGAGCAGAAC +
Preference number: 3 (lower is better)
Translates to: HPGWGGSKDCTS*QGSPPTRSEQN
Trigger: GTTCTGCTCTGACCGTGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTTGCTCCCACCCCATCCGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR CCA 72 bp TCAATAGTCAGGGACAGGCGGCCATCCCGGATGGGGTaGGAGCAAGGACTGTACATCCTGACAAGGATCACC +
Preference number: 3 (lower is better)
Translates to: SIVRDRRPSRMG*EQGLYILTRIT
Trigger: GGTGATCCTTGTCAGGATGTACAGTCCTTGCTCCCACCCCATCCGGGATGGCCGCCTGTCCCTGACTATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CAA 90 bp TGGGAGCAAGGACTGTACATCCTGACAAGGATCACCACCCACACGGTCAGAGCACCCATGATTTTGCTGTaGCCAAGGCCGTCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: WEQGLYILTRITTHTVRAPMILL*PRPSRG
Trigger: GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGG...TGCTCTGACCGTGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTTGCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CAA 90 bp CACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGCTGTTGTCCCATGATTTaGCTGTTGCCAAGGCCGTCC +
Preference number: 3 (lower is better)
Translates to: HLPMDRKLPPASGAASYCCCPMI*LLPRPS
Trigger: GGACGGCCTTGGCAACAGCAAAATCATGGGACAACA...GCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR CAA 90 bp CTGGGAGCCGCTGGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGCATCGTACTGAACTTCTCCTTGGCTTaGGGATCATCCTTATTTGTG +
Preference number: 3 (lower is better)
Translates to: LGAAGPRIEACRAVGIVLNFSLA*GSSLFV
Trigger: CACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTT...CAGTACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR CAA 90 bp CGCTGGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGCATCGTACTGCTTCCTCTTGGGAGAACTTCTCCTaGGCTTTGGGATCATCCTTA +
Preference number: 3 (lower is better)
Translates to: RWPQDRSLQSRRHRTASSWENFS*ALGSSL
Trigger: TAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCCA...AGAGGAAGCAGTACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR CAA 90 bp CTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTCCCATGATTTTGCTGTaGCCAAGGCCGTCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: LPVKTTCQEELILEPPGGPMILL*PRPSRG
Trigger: GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGG...ACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR TCA 72 bp CACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATaGTTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTG +
Preference number: 3 (lower is better)
Translates to: HCDLSVERGVVP*FCCCQGRPEAL
Trigger: CAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR TCA 72 bp CAAATGAAGAGGATGAGAACTCGCCAAAGATCTTCCTaGACAGCTCCTCGGGGTCCACAGTGGGGCCTCCCT +
Preference number: 3 (lower is better)
Translates to: QMKRMRTRQRSS*TAPRGPQWGLP
Trigger: AGGGAGGCCCCACTGTGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTTCTCATCCTCTTCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR GCA 72 bp AGCCCGAAGATCCTGAAACACATGGAAACTGCGACATaGTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCT +
Preference number: 3 (lower is better)
Translates to: SPKILKHMETAT*YQQRLGNGGSA
Trigger: AGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGCAGTTTCCATGTGTTTCAGGATCTTCGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR GCA 72 bp CTGAGCTATAGAAATAAAGAGGTCGGAGTGGATGTCTaGGCCGTCCCTCCGGAACACAGGGCTTTTCTGCAC +
Preference number: 3 (lower is better)
Translates to: LSYRNKEVGVDV*AVPPEHRAFLH
Trigger: GTGCAGAAAAGCCCTGTGTTCCGGAGGGACGGCGCAGACATCCACTCCGACCTCTTTATTTCTATAGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR CCA 72 bp AAAATTTCCCTTTTTCCCACAGGCATCCTCACGGTCTaGCCATCCTCGACTCCTGCAGGCACAGGGATCATC +
Preference number: 3 (lower is better)
Translates to: KISLFPTGILTV*PSSTPAGTGII
Trigger: GATGATCCCTGTGCCTGCAGGAGTCGAGGATGGCCAGACCGTGAGGATGCCTGTGGGAAAAAGGGAAATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR GCA 72 bp AGGGATCATCACTCGCTTTTTCTGCTTGGCTTGTCCTaGTCCCCTGCAGACCACACAGGGCGATATGATGAT +
Preference number: 3 (lower is better)
Translates to: RDHHSLFLLGLS*SPADHTGRYDD
Trigger: ATCATCATATCGCCCTGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAGTGATGATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR CAA 90 bp TCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCGAACCTCCCGGAGGTTaGCTGAGAAGGAAATTAATC +
Preference number: 3 (lower is better)
Translates to: SMPGLQQQDSIVRDRRPSEPPGG*LRRKLI
Trigger: GATTAATTTCCTTCTCAGCAAACCTCCGGGAGGTTC...GGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CAA 90 bp CCAAATGAAGAGGATGAGAACTCGCCAAAGATCTTCCTGAACAGCTCCTCGGGGTTCACGGTGAACTCCTaGTTGACCCCCTTTGCAGCT +
Preference number: 3 (lower is better)
Translates to: PNEEDENSPKIFLNSSSGFTVNS*LTPFAA
Trigger: AGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAA...CCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTTCTCATCCTCTTCATTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR-3UTR CAA 90 bp ACACGTGTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTGCAGCTTGACAAAAGGGCCTGTGTaGATGGTTTCCATGCCGGAG +
Preference number: 3 (lower is better)
Translates to: TRVHDVHGELLVDPLCSLTKGPV*MVSMPE
Trigger: CTCCGGCATGGAAACCATCAACACAGGCCCTTTTGT...CAAGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATGGACACGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
3UTR-3UTR CAA 90 bp GAAGAGGATGAGAACTCGCCAAAGATCTTCCTGAACAGCTCCTCGGGGTCCACAAACTTCTCCTTGGCTTaGGGATCATCCTTATTTGTG +
Preference number: 3 (lower is better)
Translates to: EEDENSPKIFLNSSSGSTNFSLA*GSSLFV
Trigger: CACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTT...TGTGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTTCTCATCCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR CAA 90 bp CTCCTTGGCTTTGGGATCATCCTTATTTGTGTCAGGGTGATACTTCTTGGCAAGTTCACGGTGAACTCCTaGTTGACCCCCTTTGCAGCT +
Preference number: 3 (lower is better)
Translates to: LLGFGIILICVRVILLGKFTVNS*LTPFAA
Trigger: AGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAA...CTTGCCAAGAAGTATCACCCTGACACAAATAAGGATGATCCCAAAGCCAAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR CCA 72 bp AGGCTTCTGCCAGCTGGGAGAACTTCTCCTTGGCTTTaGGATCATCCTTATTTGTGTCAGGGTGATACTTCT +
Preference number: 3 (lower is better)
Translates to: RLLPAGRTSPWL*DHPYLCQGDTS
Trigger: AGAAGTATCACCCTGACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCCAGCTGGCAGAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR-3UTR CAA 90 bp AATATTCAATTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCCCATGATTTTGCTGTaGCCAAGGCCGTCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: NIQFQIRVLALQESNHLPPMILL*PRPSRG
Trigger: GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGG...AGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAATTGAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
3UTR-3UTR CAA 90 bp GAAACTGTTGAGAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCGAACCTCCCGGAGGTTaGCTGAGAAGGAAATTAATC +
Preference number: 3 (lower is better)
Translates to: ETVEKCSSLTCLTTARRSEPPGG*LRRKLI
Trigger: GATTAATTTCCTTCTCAGCAAACCTCCGGGAGGTTC...GGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTCTCAACAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR-3UTR CAA 90 bp GATCAAACACGGTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAAAGATGGGAGAACTTCTCCTaGGCTTTGGGATCATCCTTA +
Preference number: 3 (lower is better)
Translates to: DQTRSGNLQMKRMRTRQRWENFS*ALGSSL
Trigger: TAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCCA...TCTTTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGACCGTGTTTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR-3UTR CAA 90 bp ACGGTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAAAGATCTTCCTGAACTTCTCCTTGGCTTaGGGATCATCCTTATTTGTG +
Preference number: 3 (lower is better)
Translates to: TVWKSPNEEDENSPKIFLNFSLA*GSSLFV
Trigger: CACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTT...CAGGAAGATCTTTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
3UTR GCA 72 bp CATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTaGAGCTTGATTGAATGTCAACTCCATGAAGTATTC +
Preference number: 3 (lower is better)
Translates to: HDVHGELLVDPL*SLIECQLHEVF
Trigger: GAATACTTCATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
3UTR-3UTR CAA 90 bp ACTTCTCCTTGGCTTTGGGATCATCCTTATTTGTGTCAGGGTGATACTTCTTGGAACTTCTCCTTGGCTTaGGGATCATCCTTATTTGTG +
Preference number: 3 (lower is better)
Translates to: TSPWLWDHPYLCQGDTSWNFSLA*GSSLFV
Trigger: CACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTT...CCAAGAAGTATCACCCTGACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CCA 90 bp GAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGGACCGCGCAGCCATCTTaGCCCGGGGACTCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: EQLMPRQGPSLGEDGAGGTAQPS*PGDSAP
Trigger: AGGCGCAGAGTCCCCGGGCCAAGATGGCTGCGCGGT...CCCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000431375.6
ENST00000612103.4
CDS-3UTR CCA 90 bp TGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGCCTCGGGGTCCACAGTaGGGCCTCCCTTCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: WASTCLPGTDCAAAWYPGPRGPQ*GLPSSS
Trigger: GCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGG...CCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp CAGGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGACCATCTCCCTCTGCCTaGGCCAGGGGCCGTCACCTA +
Preference number: 4 (lower is better)
Translates to: QVPWPLEGLLLPGLVSSGPSPSA*ARGRHL
Trigger: TAGGTGACGGCCCCTGGCTCAGGCAGAGGGAGATGG...TCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000576911.5
ENST00000612103.4
ENST00000615114.2
CDS-3UTR GCA 90 bp GGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGATCCGGGCTCGTTCCCCTTaGCGTTGCAGCGCTCACACG +
Preference number: 4 (lower is better)
Translates to: GALALGGAAASRPSFQWIRARSP*RCSAHT
Trigger: CGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCG...GATCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000576911.5
ENST00000612103.4
ENST00000615114.2
CDS-3UTR GCA 90 bp AGAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGCCCAGGCACCGACTGTaGAGCTGCTTGGTACCCCGG +
Preference number: 4 (lower is better)
Translates to: RAADASAGPLIRGGRCWWPRHRL*SCLVPR
Trigger: CCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGG...CCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CCTCGGGGTCCACAGTGGGGCCTCCCTTCCAGTAGCTATGCTGGGAGCCGCTGGTATGCTGGGAGCCGCTaGCCCCAGGATCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: PRGPQWGLPSSSYAGSRWYAGSR*PQDRSL
Trigger: CAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATA...CCAGCGGCTCCCAGCATAGCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CCA 90 bp CCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGGTGCCCTGGCCCTTaGAGGGGCTGCTGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: PLGLHPTARAVHCDLSVERCPGP*RGCCFP
Trigger: CGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCT...CTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp TGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTGTCTCCCAGGTGCCCTaGCCCTTGGAGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CCCQGRPEALRVGAQCCCVSQVP*PLEGLL
Trigger: CAGCAGCCCCTCCAAGGGCCAGGGCACCTGGGAGAC...ACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp CCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGGTCTCCCAGGTGCCCTaGCCCTTGGAGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLGLHPTARAVHCDLSVEVSQVP*PLEGLL
Trigger: CAGCAGCCCCTCCAAGGGCCAGGGCACCTGGGAGAC...CTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp AGAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGCCCCCAGGGACTCTCTaGGCCTCTACGTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RAADASAGPLIRGGRCWWPPGTL*ASTCLP
Trigger: TGGGAGGCACGTAGAGGCCCAGAGAGTCCCTGGGGG...CCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CAGGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGACCCCCAGGGACTCTCTaGGCCTCTACGTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QVPWPLEGLLLPGLVSSGPPGTL*ASTCLP
Trigger: TGGGAGGCACGTAGAGGCCCAGAGAGTCCCTGGGGG...TCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR TCA 90 bp TTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGCCATCTCCCTCTGCCTaGGCCAGGGGCCGTCACCTA +
Preference number: 4 (lower is better)
Translates to: LLLPRPSRGSAGGSSVLLPSPSA*ARGRHL
Trigger: TAGGTGACGGCCCCTGGCTCAGGCAGAGGGAGATGG...CAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp TGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTCCATCTCCCTCTGCCTaGGCCAGGGGCCGTCACCTA +
Preference number: 4 (lower is better)
Translates to: CCCQGRPEALRVGAQCCCPSPSA*ARGRHL
Trigger: TAGGTGACGGCCCCTGGCTCAGGCAGAGGGAGATGG...ACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp TCCCTTCCAGTAGCTATGCTGGGAGCCGCTGGCCCCAGGATCGAAGCCTGCAGACGGGGACGCTCAGCTTaGGGCTCAGCCATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SLPVAMLGAAGPRIEACRRGRSA*GSAMPP
Trigger: TGGGGGCATGGCTGAGCCGCAAGCTGAGCGTCCCCG...TCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATAGCTACTGGAAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR GCA 90 bp TGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGAATGCTGCACCTTGGTaGCGGGCTCGTTCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: WASTCLPGTDCAAAWYPGNAAPW*RARSPC
Trigger: GCAAGGGGAACGAGCCCGGCACCAAGGTGCAGCATT...CCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CTGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGCTCAGGATCAGGCTCTaGTGCCGGCTCGTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: LGLYVPPRHRLCSCLVPRLRIRL*CRLVSL
Trigger: GAGGCTAACGAGCCGGCAGCAGAGCCTGATCCTGAG...CCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp GTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTTCTGACCAGCCTCTGGGGCTaGATCCTACTGCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: VAKAVQRLCGWELSAAVLTSLWG*ILLPGL
Trigger: CAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGT...CAGAACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp GTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTTCTGCCCAGGCACCGACTGTaGAGCTGCTTGGTACCCCGG +
Preference number: 4 (lower is better)
Translates to: VAKAVQRLCGWELSAAVLPRHRL*SCLVPR
Trigger: CCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGG...CAGAACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp TGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGTGGCCAGCACAGTGCTaGAATGGGCTGTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: WASTCLPGTDCAAAWYPGWPAQC*NGLWLS
Trigger: GCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCA...CCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp ATGCTGGGAGCCGCTGGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGCATCGTACCTCGGGGTCCACAGTaGGGCCTCCCTTCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: MLGAAGPRIEACRAVGIVPRGPQ*GLPSSS
Trigger: GCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGG...TACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CCA 90 bp GGTCAGAGCAGAACCCCCAGGGACTCTCTGGGCCTCTACGTGCCTCCCAGGCACGGCAATGCTGCACCTTaGTGCCGGGCTCGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GQSRTPRDSLGLYVPPRHGNAAP*CRARSP
Trigger: AGGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCC...GTGCCTGGGAGGCACGTAGAGGCCCAGAGAGTCCCTGGGGGTTCTGCTCTGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp GGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGAAGGCAATGCTGCACCTTaGTGCCGGGCTCGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GLYVPPRHRLCSCLVPREGNAAP*CRARSP
Trigger: AGGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCC...TTCCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CCGGGCTCGTTCCCCTTGCCGTTGCAGCGCTCACACGTGTCCATGATGTTCACGAGGTGCCCTGGCCCTTaGAGGGGCTGCTGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: PGSFPLPLQRSHVSMMFTRCPGP*RGCCFP
Trigger: CGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCT...CGTGAACATCATGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR CCA 90 bp CCCAAGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCAGGTGCCCTGGCCCTTaGAGGGGCTGCTGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: PKAAEVWPAQCCNGLWLSRCPGP*RGCCFP
Trigger: CGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCT...GCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGCAGAGGCTCTGCGGGTaGGAGCTCAGTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: WASTCLPGTDCAAAWYPGQRLCG*ELSAAV
Trigger: AACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTG...CCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CAGGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGAACTGCCACCAGCCTCTaGGGCTGCATCCTACTGCCC +
Preference number: 4 (lower is better)
Translates to: QVPWPLEGLLLPGLVSSGTATSL*GCILLP
Trigger: GGGCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGT...TCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000576911.5
ENST00000612103.4
ENST00000615114.2
CDS-3UTR CCA 90 bp TTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGGGCGGCCATCCCGGATaGGGTGGGAGCAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: LLLPRPSRGSAGGSSVLLGGHPG*GGSKDC
Trigger: ACAGTCCTTGCTCCCACCCCATCCGGGATGGCCGCC...CAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp GGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGATCGGGGGATCGTCACGTTaGTCGTCTCGTACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GALALGGAAASRPSFQWIGGSSR*SSRTGP
Trigger: AGGGCCTGTACGAGACGATCAACGTGACGATCCCCC...GATCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000576911.5
ENST00000612103.4
ENST00000615114.2
CDS-3UTR TCA 90 bp GGTCAGAGCAGAACCCCCAGGGACTCTCTGGGCCTCTACGTGCCTCCCAGGCACGGGGGATCGTCACGTTaGTCGTCTCGTACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GQSRTPRDSLGLYVPPRHGGSSR*SSRTGP
Trigger: AGGGCCTGTACGAGACGATCAACGTGACGATCCCCC...GTGCCTGGGAGGCACGTAGAGGCCCAGAGAGTCCCTGGGGGTTCTGCTCTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp TTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGCCGGGCTGTCCACTGTaGCCTTTCCGTGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LLLPRPSRGSAGGSSVLLPGCPL*PFRGER
Trigger: CCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGG...CAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp CTGAGCCAGGGGCCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGACTGAGCAGAGCAGCTaGTGCCTCGGCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LSQGPSPTNGQETATSLWTEQSS*CLGRAP
Trigger: AGGGGCCCTGCCGAGGCATCAGCTGCTCTGCTCAGT...CCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGCCCCTGGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp GAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGGAGTTCCCAAGGCAGCTaGAGTCTGGCCAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: EQLMPRQGPSLGEDGAGGSSQGS*SLASTV
Trigger: CACTGTGCTGGCCAGACTTCAGCTGCCTTGGGAACT...CCCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp AGAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGCGTTCCCCTTGCCGTTaGAGCGCTCACACGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RAADASAGPLIRGGRCWWRSPCR*SAHTCP
Trigger: TGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACG...CCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CAGGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGACTCAGGATCAGGCTCTaGTGCCGGCTCGTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: QVPWPLEGLLLPGLVSSGLRIRL*CRLVSL
Trigger: GAGGCTAACGAGCCGGCAGCAGAGCCTGATCCTGAG...TCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000576911.5
ENST00000612103.4
ENST00000615114.2
CDS-3UTR GCA 90 bp TGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGCGGGTGGGAGCTCAGTaGTGCTGTTCTGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: WASTCLPGTDCAAAWYPGRVGAQ*CCSGIL
Trigger: GAGGATTCCAGAACAGCAGCACTGAGCTCCCACCCG...CCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp GAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGGCAATGGACAGGAAACTaGCACCAGCCTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: EQLMPRQGPSLGEDGAGGQWTGN*HQPLGL
Trigger: CAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTG...CCCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp AGAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGTGGCCAGCACAGTGCTaGAATGGGCTGTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RAADASAGPLIRGGRCWWWPAQC*NGLWLS
Trigger: GCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCA...CCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TCCCTTCCAGTAGCTATGCTGGGAGCCGCTGGCCCCAGGATCGAAGCCTGCAGACCTCGGGGTCCACAGTaGGGCCTCCCTTCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SLPVAMLGAAGPRIEACRPRGPQ*GLPSSS
Trigger: GCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGG...TCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATAGCTACTGGAAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CCA 90 bp CACCAGCCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGGCAATGCTGCACCTTaGTGCCGGGCTCGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: HQPLGLHPTARAVHCDLSGNAAP*CRARSP
Trigger: AGGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCC...GGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp GATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGTCTCCCAGGTGCCCTaGCCCTTGGAGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DFAVAKAVQRLCGWELSAVSQVP*PLEGLL
Trigger: CAGCAGCCCCTCCAAGGGCCAGGGCACCTGGGAGAC...AGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp ATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGGTCTCCCAGGTGCCCTaGCCCTTGGAGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ILLLPRPSRGSAGGSSVLVSQVP*PLEGLL
Trigger: CAGCAGCCCCTCCAAGGGCCAGGGCACCTGGGAGAC...CAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp AGAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGCAGAGGCTCTGCGGGTaGGAGCTCAGTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: RAADASAGPLIRGGRCWWQRLCG*ELSAAV
Trigger: AACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTG...CCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTACTGCCACCAGCCTCTaGGGCTGCATCCTACTGCCC +
Preference number: 4 (lower is better)
Translates to: CCCQGRPEALRVGAQCCCTATSL*GCILLP
Trigger: GGGCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGT...ACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp CCAGGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGTGCTGCAATGGGCTGTaGCTCAGCAGAAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PGALALGGAAASRPSFQWCCNGL*LSRRAG
Trigger: TCCTGCCCTTCTGCTGAGCCACAGCCCATTGCAGCA...CCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR CCA 90 bp GAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGGTGCTGCAATGGGCTGTaGCTCAGCAGAAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: EQLMPRQGPSLGEDGAGGCCNGL*LSRRAG
Trigger: TCCTGCCCTTCTGCTGAGCCACAGCCCATTGCAGCA...CCCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp CTCCTCGGGGTCCACAGTGGGGCCTCCCTTCCAGTAGCTATGCTGGGAGCCGCTCGCCAAAGATCTTCCTaGACAGCTCCTCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LLGVHSGASLPVAMLGAARQRSS*TAPRGP
Trigger: TGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCG...AGCGGCTCCCAGCATAGCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR TCA 90 bp TGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTGGAGAACCAAGCCCCTaGCTAGCAACAGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: CCCQGRPEALRVGAQCCCGEPSP*LATVAG
Trigger: CCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCTCC...ACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTCGGGGACGCTCAGCTTaGGGCTCAGCCATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LHPTARAVHCDLSVERGVRGRSA*GSAMPP
Trigger: TGGGGGCATGGCTGAGCCGCAAGCTGAGCGTCCCCG...AACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp TGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGCGGGGACGCTCAGCTTaGGGCTCAGCCATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: CILLPGLSTVTFPWREVLRGRSA*GSAMPP
Trigger: TGGGGGCATGGCTGAGCCGCAAGCTGAGCGTCCCCG...CAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CAGGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGACCCAGGATCGAAGCCTaGAGAGCCGTAGGCATCGTA +
Preference number: 4 (lower is better)
Translates to: QVPWPLEGLLLPGLVSSGPRIEA*RAVGIV
Trigger: TACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGG...TCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR GCA 90 bp CCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGCGTTCCCCTTGCCGTTaGAGCGCTCACACGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PLGLHPTARAVHCDLSVERSPCR*SAHTCP
Trigger: TGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACG...CTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CACCAGCCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCCGTTCCCCTTGCCGTTaGAGCGCTCACACGTGTCCA +
Preference number: 4 (lower is better)
Translates to: HQPLGLHPTARAVHCDLSRSPCR*SAHTCP
Trigger: TGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACG...GGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CACCAGCCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCAATGCTGCACCTTGGTaGCGGGCTCGTTCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: HQPLGLHPTARAVHCDLSNAAPW*RARSPC
Trigger: GCAAGGGGAACGAGCCCGGCACCAAGGTGCAGCATT...GGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp TTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGAATGCTGCACCTTGGTaGCGGGCTCGTTCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LLLPRPSRGSAGGSSVLLNAAPW*RARSPC
Trigger: GCAAGGGGAACGAGCCCGGCACCAAGGTGCAGCATT...CAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CAGGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGACGGGTGGGAGCTCAGTaGTGCTGTTCTGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: QVPWPLEGLLLPGLVSSGRVGAQ*CCSGIL
Trigger: GAGGATTCCAGAACAGCAGCACTGAGCTCCCACCCG...TCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000576911.5
ENST00000612103.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CATCTGTCTCGTCCTCGGCGTAGCTCAGGATCAGGCTCTGCTGCCGGCTCGTTAACCAGCCTCTGGGGCTaGATCCTACTGCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: HLSRPRRSSGSGSAAGSLTSLWG*ILLPGL
Trigger: CAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGT...TAACGAGCCGGCAGCAGAGCCTGATCCTGAGCTACGCCGAGGACGAGACAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR GCA 90 bp GGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGAACAATGGACAGGAAACTaGCACCAGCCTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLYVPPRHRLCSCLVPREQWTGN*HQPLGL
Trigger: CAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTG...TTCCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp GGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGAAGGCAGGAGCCCTCCATaGCTGGCTTACAACAACAGG +
Preference number: 4 (lower is better)
Translates to: GLYVPPRHRLCSCLVPREGRSPP*LAYNNR
Trigger: CCTGTTGTTGTAAGCCAGGCATGGAGGGCTCCTGCC...TTCCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp GAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGGATGGAAACTGCGACATaGTACCAGCAGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: EQLMPRQGPSLGEDGAGGMETAT*YQQRLG
Trigger: CCCCAGCCTCTGCTGGTAGCATGTCGCAGTTTCCAT...CCCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CGCTGGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGCATCGTACTGCTTCCTCTTATGCTGGGAGCCGCTaGCCCCAGGATCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: RWPQDRSLQSRRHRTASSYAGSR*PQDRSL
Trigger: CAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATA...AGAGGAAGCAGTACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CCA 90 bp GCCAAAGATCTTCCTGAACAGCTCCTCGGGGTCCACAGTGGGGCCTCCCTTCCACCTCGGGGTCCACAGTaGGGCCTCCCTTCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: AKDLPEQLLGVHSGASLPPRGPQ*GLPSSS
Trigger: GCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGG...TGGAAGGGAGGCCCCACTGTGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CCA 90 bp CTGAGCCAGGGGCCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCAATGCTGCACCTTaGTGCCGGGCTCGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LSQGPSPTNGQETATSLWGNAAP*CRARSP
Trigger: AGGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCC...CCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGCCCCTGGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATAGGTGCCCTGGCCCTTaGAGGGGCTGCTGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDRCPGP*RGCCFP
Trigger: CGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCT...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp ATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCGTCTCCCAGGTGCCCTaGCCCTTGGAGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ILLPGLSTVTFPWREVLSVSQVP*PLEGLL
Trigger: CAGCAGCCCCTCCAAGGGCCAGGGCACCTGGGAGAC...GGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp TTTCCATGCCGGAGCCGCCACAGTAGTGGCAATGCTGCACCTTGGTGCCGGGCTACTGCCACCAGCCTCTaGGGCTGCATCCTACTGCCC +
Preference number: 4 (lower is better)
Translates to: FPCRSRHSSGNAAPWCRATATSL*GCILLP
Trigger: GGGCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGT...AGCCCGGCACCAAGGTGCAGCATTGCCACTACTGTGGCGGCTCCGGCATGGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR CCA 90 bp CAGGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGACCATCCCGGATGGGGTaGGAGCAAGGACTGTACATC +
Preference number: 4 (lower is better)
Translates to: QVPWPLEGLLLPGLVSSGPSRMG*EQGLYI
Trigger: GATGTACAGTCCTTGCTCCCACCCCATCCGGGATGG...TCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR CCA 90 bp GATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGGCGGCCATCCCGGATaGGGTGGGAGCAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: DFAVAKAVQRLCGWELSAGGHPG*GGSKDC
Trigger: ACAGTCCTTGCTCCCACCCCATCCGGGATGGCCGCC...AGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGGGAGCCCTCCATGCCTaGCTTACAACAACAGGACTC +
Preference number: 4 (lower is better)
Translates to: WASTCLPGTDCAAAWYPGGALHA*LTTTGL
Trigger: GAGTCCTGTTGTTGTAAGCCAGGCATGGAGGGCTCC...CCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGAGCACAGTGCTGCAATaGGCTGTGGCTCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LGLYVPPRHRLCSCLVPRSTVLQ*AVAQQK
Trigger: CTTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCT...CCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGACCGCGCAGCCATCTTaGCCCGGGGACTCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: CCPMILLLPRPSRGSAGGTAQPS*PGDSAP
Trigger: AGGCGCAGAGTCCCCGGGCCAAGATGGCTGCGCGGT...CCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431375.6
ENST00000612103.4
CDS-3UTR TCA 90 bp ACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCCGGATGGGGTGGGAGCACCGGGCTGTCCACTGTaGCCTTTCCGTGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TTGLNSQGQAAIPDGVGAPGCPL*PFRGER
Trigger: CCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGG...TGCTCCCACCCCATCCGGGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp ATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCCGGGCTGTCCACTGTaGCCTTTCCGTGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: ILLLPRPSRGSAGGSSVLPGCPL*PFRGER
Trigger: CCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGG...CAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp CTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGATCTTTTTCCCATCTCCCTCTGCCTaGGCCAGGGGCCGTCACCTA +
Preference number: 4 (lower is better)
Translates to: LALGGAAASRPSFQWIFFPSPSA*ARGRHL
Trigger: TAGGTGACGGCCCCTGGCTCAGGCAGAGGGAGATGG...GAAAAAGATCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000576911.5
ENST00000612103.4
ENST00000615114.2
CDS-3UTR TCA 90 bp CTGAGCCAGGGGCCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGCCCCACGCTCCCAGTaGAGACAACCTGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LSQGPSPTNGQETATSLWAPRSQ*RQPVRK
Trigger: CTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGGGC...CCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGCCCCTGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp GCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATGGACTGAGCAGAGCAGCTaGTGCCTCGGCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: ATCYQQRLGNGGSALTEWTEQSS*CLGRAP
Trigger: AGGGGCCCTGCCGAGGCATCAGCTGCTCTGCTCAGT...CCATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp CCAGGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGGGGTTCTGCTCTCACTaGATGGTGGGGAACCTTCAA +
Preference number: 4 (lower is better)
Translates to: PGALALGGAAASRPSFQWGFCSH*MVGNLQ
Trigger: TTGAAGGTTCCCCACCATTCAGTGAGAGCAGAACCC...CCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR GCA 90 bp AGTAGCTATGCTGGGAGCCGCTGGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGCCCAGGATCGAAGCCTaGAGAGCCGTAGGCATCGTA +
Preference number: 4 (lower is better)
Translates to: SSYAGSRWPQDRSLQSRRPRIEA*RAVGIV
Trigger: TACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGG...CCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATAGCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR GCA 90 bp GTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTTCTGCCCAGGATCGAAGCCTaGAGAGCCGTAGGCATCGTA +
Preference number: 4 (lower is better)
Translates to: VAKAVQRLCGWELSAAVLPRIEA*RAVGIV
Trigger: TACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGG...CAGAACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp GCCTGGGGGCCCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTCGGGCTCGTTCCCCTTaGCGTTGCAGCGCTCACACG +
Preference number: 4 (lower is better)
Translates to: AWGPHAPSEDNLSGRTHSRARSP*RCSAHT
Trigger: CGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCG...AGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGGGCCCCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp ATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGGTCGGAGTGGATGTCTaGGCCGTCCCTCCGGAACAC +
Preference number: 4 (lower is better)
Translates to: ILLLPRPSRGSAGGSSVLVGVDV*AVPPEH
Trigger: GTGTTCCGGAGGGACGGCGCAGACATCCACTCCGAC...CAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CACCAGCCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCCGGGTGGGAGCTCAGTaGTGCTGTTCTGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: HQPLGLHPTARAVHCDLSRVGAQ*CCSGIL
Trigger: GAGGATTCCAGAACAGCAGCACTGAGCTCCCACCCG...GGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATACCAGCCTCTGGGGCTaGATCCTACTGCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDTSLWG*ILLPGL
Trigger: CAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGT...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp TGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGACCAGCCTCTGGGGCTaGATCCTACTGCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: CCPMILLLPRPSRGSAGGTSLWG*ILLPGL
Trigger: CAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGT...CCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp GCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATGGCCTCGGGGTCCACAGTaGGGCCTCCCTTCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: ATCYQQRLGNGGSALTEWPRGPQ*GLPSSS
Trigger: GCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGG...CCATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CAGGGCGATATGATGATGGAGCCGCGGCCACCACATCTCCTACACGTGGAACGCGGCAATGCTGCACCTTaGTGCCGGGCTCGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: QGDMMMEPRPPHLLHVERGNAAP*CRARSP
Trigger: AGGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCC...GCGTTCCACGTGTAGGAGATGTGGTGGCCGCGGCTCCATCATCATATCGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR CCA 90 bp CTGAGCCAGGGGCCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGCTGCGGAGCTATCCATaGTGCTGCCACCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSQGPSPTNGQETATSLWLRSYP*CCHQSW
Trigger: CCAGCTCTGGTGGCAGCACCATGGATAGCTCCGCAG...CCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGCCCCTGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR CCA 90 bp TCGTTCCCCTTGCCGTTGCAGCGCTCACACGTGTCCATGATGTTCACGGTGAACAGGTGCCCTGGCCCTTaGAGGGGCTGCTGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: SFPLPLQRSHVSMMFTVNRCPGP*RGCCFP
Trigger: CGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCT...GTTCACCGTGAACATCATGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR CCA 90 bp AGAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGTCAGTGCTGCTGTTCTaGAATCCTCCCGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RAADASAGPLIRGGRCWWSVLLF*NPPVSQ
Trigger: CTGGGAGACGGGAGGATTCCAGAACAGCAGCACTGA...CCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CCGGGCTCGTTCCCCTTGCCGTTGCAGCGCTCACACGTGTCCATGATGTTCACGCAGAGGCTCTGCGGGTaGGAGCTCAGTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PGSFPLPLQRSHVSMMFTQRLCG*ELSAAV
Trigger: AACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTG...CGTGAACATCATGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR CCA 90 bp CCCAAGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCCAGAGGCTCTGCGGGTaGGAGCTCAGTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PKAAEVWPAQCCNGLWLSQRLCG*ELSAAV
Trigger: AACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTG...GCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp GGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGATCGCCGTCACCTACCAATaGACAGGAAACTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: GALALGGAAASRPSFQWIAVTYQ*TGNCHQ
Trigger: CTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGC...GATCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000576911.5
ENST00000612103.4
ENST00000615114.2
CDS-3UTR CCA 90 bp CACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGCCCCCCAGGGACTCTCTaGGCCTCTACGTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: HLPMDRKLPPASGAASYCPPGTL*ASTCLP
Trigger: TGGGAGGCACGTAGAGGCCCAGAGAGTCCCTGGGGG...GCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp GTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTTCTGCCATCCCGGATGGGGTaGGAGCAAGGACTGTACATC +
Preference number: 4 (lower is better)
Translates to: VAKAVQRLCGWELSAAVLPSRMG*EQGLYI
Trigger: GATGTACAGTCCTTGCTCCCACCCCATCCGGGATGG...CAGAACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATGGCGGCCATCCCGGATaGGGTGGGAGCAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDGGHPG*GGSKDC
Trigger: ACAGTCCTTGCTCCCACCCCATCCGGGATGGCCGCC...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CACCAGCCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCTGCTGCAATGGGCTGTaGCTCAGCAGAAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HQPLGLHPTARAVHCDLSCCNGL*LSRRAG
Trigger: TCCTGCCCTTCTGCTGAGCCACAGCCCATTGCAGCA...GGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGAAGGCAGCTGAAGTCTaGCCAGCACAGTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: LGLYVPPRHRLCSCLVPRKAAEV*PAQCCN
Trigger: ATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTT...CCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGCTACCAGCAGAGGCTaGGGAATGGGGGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: WGCILLPGLSTVTFPWREATSRG*GMGVLL
Trigger: GAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGC...CTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR CAA 72 bp TGCTGCACCTTGGTGCCGGGCTCGTTCCCCTTGCCGTaGCAGCGCTCACACGTGTCCATGATGTTCACGGTG +
Preference number: 4 (lower is better)
Translates to: CCTLVPGSFPLP*QRSHVSMMFTV
Trigger: CACCGTGAACATCATGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGGCACCAAGGTGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR TCA 90 bp GTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTTCTGCAAAAGGGCCTGTGTTaGTGGTTTCCATGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: VAKAVQRLCGWELSAAVLQKGLC*WFPCRS
Trigger: GCTCCGGCATGGAAACCATCAACACAGGCCCTTTTG...CAGAACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp GATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGGGGGATCGTCACGTTaGTCGTCTCGTACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: DFAVAKAVQRLCGWELSAGGSSR*SSRTGP
Trigger: AGGGCCTGTACGAGACGATCAACGTGACGATCCCCC...AGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp AGAACCAAGCCCCTGACTAGCAACAGTGGCAGGGCTTCAGTTCCCAAGGCAGCTCCATCTCCCTCTGCCTaGGCCAGGGGCCGTCACCTA +
Preference number: 4 (lower is better)
Translates to: RTKPLTSNSGRASVPKAAPSPSA*ARGRHL
Trigger: TAGGTGACGGCCCCTGGCTCAGGCAGAGGGAGATGG...AGCTGCCTTGGGAACTGAAGCCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp TCCCTTCCAGTAGCTATGCTGGGAGCCGCTGGCCCCAGGATCGAAGCCTGCAGACCCAGGATCGAAGCCTaGAGAGCCGTAGGCATCGTA +
Preference number: 4 (lower is better)
Translates to: SLPVAMLGAAGPRIEACRPRIEA*RAVGIV
Trigger: TACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGG...TCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATAGCTACTGGAAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR GCA 90 bp CCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCGGGCTCGTTCCCCTTaGCGTTGCAGCGCTCACACG +
Preference number: 4 (lower is better)
Translates to: PWREVLSHDFAVAKAVQRRARSP*RCSAHT
Trigger: CGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCG...CCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCCGGGCTCGTTCCCCTTaGCGTTGCAGCGCTCACACG +
Preference number: 4 (lower is better)
Translates to: RGERCCPMILLLPRPSRGRARSP*RCSAHT
Trigger: CGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCG...GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp GATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTAATGCTGCACCTTGGTaGCGGGCTCGTTCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: DFAVAKAVQRLCGWELSANAAPW*RARSPC
Trigger: GCAAGGGGAACGAGCCCGGCACCAAGGTGCAGCATT...AGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp GAGTGGATGTCTGCGCCGTCCCTCCGGAACACAGGGCTTTTCTGCACCCTGAACAATGCTGCACCTTGGTaGCGGGCTCGTTCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: EWMSAPSLRNTGLFCTLNNAAPW*RARSPC
Trigger: GCAAGGGGAACGAGCCCGGCACCAAGGTGCAGCATT...GTTCAGGGTGCAGAAAAGCCCTGTGTTCCGGAGGGACGGCGCAGACATCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR GCA 90 bp CTGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGATCACTCGCTTTTTCTaGTTGGCTTGTCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LGLYVPPRHRLCSCLVPRITRFF*LACPAP
Trigger: GGGAGCAGGACAAGCCAAGCAGAAAAAGCGAGTGAT...CCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGATCTTTTTCGTCGGAGTGGATGTCTaGGCCGTCCCTCCGGAACAC +
Preference number: 4 (lower is better)
Translates to: LALGGAAASRPSFQWIFFVGVDV*AVPPEH
Trigger: GTGTTCCGGAGGGACGGCGCAGACATCCACTCCGAC...GAAAAAGATCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000576911.5
ENST00000612103.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGGATCAGGCTCTGCTaGCGGCTCGTTAGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PLGLHPTARAVHCDLSVERIRLC*RLVSLF
Trigger: AAAGAGGCTAACGAGCCGGCAGCAGAGCCTGATCCT...CTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp GCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCAGAAGGCTCAGGATCAGGCTCTaGTGCCGGCTCGTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: AAEVWPAQCCNGLWLSRRLRIRL*CRLVSL
Trigger: GAGGCTAACGAGCCGGCAGCAGAGCCTGATCCTGAG...CCTTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp GAGTGGATGTCTGCGCCGTCCCTCCGGAACACAGGGCTTTTCTGCACCCTGAACCTCAGGATCAGGCTCTaGTGCCGGCTCGTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: EWMSAPSLRNTGLFCTLNLRIRL*CRLVSL
Trigger: GAGGCTAACGAGCCGGCAGCAGAGCCTGATCCTGAG...GTTCAGGGTGCAGAAAAGCCCTGTGTTCCGGAGGGACGGCGCAGACATCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR GCA 90 bp TTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGCCTAGCCTTGCTTCCTaGGGAGCTATCCATGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLLPRPSRGSAGGSSVLLPSLAS*GAIHGA
Trigger: AGCACCATGGATAGCTCCGCAGGAAGCAAGGCTAGG...CAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR GCA 90 bp CTGCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATACCAGCCTCTGGGGCTaGATCCTACTGCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LRHATSRGWGMGVLLSLNTSLWG*ILLPGL
Trigger: CAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGT...ATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGATCTTTTTCCTCTGGGCCTCTACGTaGCTCCCAGGCACCGACTGT +
Preference number: 4 (lower is better)
Translates to: LALGGAAASRPSFQWIFFLWAST*LPGTDC
Trigger: ACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAGAG...GAAAAAGATCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR CCA 90 bp TCAGTTCCCAAGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCCAGCAACCAGCGTGTaGAGCACCGCGCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: SVPKAAEVWPAQCCNGLWPATSV*STAQPS
Trigger: AGATGGCTGCGCGGTGCTCCACACGCTGGTTGCTGG...CCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTTGGGAACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGTATGCTGGGAGCCGCTaGCCCCAGGATCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: CCPMILLLPRPSRGSAGGYAGSR*PQDRSL
Trigger: CAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATA...CCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATTATGCTGGGAGCCGCTaGCCCCAGGATCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDYAGSR*PQDRSL
Trigger: CAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATA...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTTTTTCCAGAGCTGGTGAGGGTGACGCCGTTCACCGTCCCCTCCACATCTGTCGGCAATGCTGCACCTTaGTGCCGGGCTCGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LFPELVRVTPFTVPSTSVGNAAP*CRARSP
Trigger: AGGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCC...GACAGATGTGGAGGGGACGGTGAACGGCGTCACCCTCACCAGCTCTGGAAAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR CCA 90 bp CACCAGCCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCCTCGCTTTTTCTGCTTaGCTTGTCCTGCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: HQPLGLHPTARAVHCDLSLAFSA*LVLLPC
Trigger: GCAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAG...GGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp GATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGGCATCCTCACGGTCTaGCCATCCTCGACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: DFAVAKAVQRLCGWELSAGILTV*PSSTPA
Trigger: TGCAGGAGTCGAGGATGGCCAGACCGTGAGGATGCC...AGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp TTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGATAAAGAGGTCGGAGTaGATGTCTGCGCCGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LLLPRPSRGSAGGSSVLLIKRSE*MSAPSL
Trigger: GAGGGACGGCGCAGACATCCACTCCGACCTCTTTAT...CAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp CCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGATAAAGAGGTCGGAGTaGATGTCTGCGCCGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PLGLHPTARAVHCDLSVEIKRSE*MSAPSL
Trigger: GAGGGACGGCGCAGACATCCACTCCGACCTCTTTAT...CTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp TGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCAGGTGCCCTGGCCCTTaGAGGGGCTGCTGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: WREVLSHDFAVAKAVQRLRCPGP*RGCCFP
Trigger: CGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCT...GAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp ACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCCGGATGGGGTGGGAGCACAGAGGCTCTGCGGGTaGGAGCTCAGTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: TTGLNSQGQAAIPDGVGAQRLCG*ELSAAV
Trigger: AACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTG...TGCTCCCACCCCATCCGGGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGACTGTGACCTTTCCGTaGAGAGAGGTGTTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: LGLYVPPRHRLCSCLVPRTVTFP*REVLSH
Trigger: ATGGGACAACACCTCTCTCCACGGAAAGGTCACAGT...CCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCCCCCCAGGGACTCTCTaGGCCTCTACGTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RGERCCPMILLLPRPSRGPPGTL*ASTCLP
Trigger: TGGGAGGCACGTAGAGGCCCAGAGAGTCCCTGGGGG...GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CCAGGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGTGTCAACAGTGTAAGTaGGAGAACCAAGCCCCTGAC +
Preference number: 4 (lower is better)
Translates to: PGALALGGAAASRPSFQWCQQCK*ENQAPD
Trigger: GTCAGGGGCTTGGTTCTCCCACTTACACTGTTGACA...CCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR CCA 90 bp CTGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGTGTCAACAGTGTAAGTaGGAGAACCAAGCCCCTGAC +
Preference number: 4 (lower is better)
Translates to: LGLYVPPRHRLCSCLVPRCQQCK*ENQAPD
Trigger: GTCAGGGGCTTGGTTCTCCCACTTACACTGTTGACA...CCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR CAA 72 bp TGGCAATGCTGCACCTTGGTGCCGGGCTCGTTCCCCTaGCCGTTGCAGCGCTCACACGTGTCCATGATGTTC +
Preference number: 4 (lower is better)
Translates to: WQCCTLVPGSFP*PLQRSHVSMMF
Trigger: GAACATCATGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR TCA 90 bp CCAGGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGACCCCCTTTGCAGCTTaGTTGAATGTCAACTCCATG +
Preference number: 4 (lower is better)
Translates to: PGALALGGAAASRPSFQWTPFAA*LNVNSM
Trigger: CATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGT...CCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000576911.5
ENST00000612103.4
ENST00000615114.2
CDS-3UTR TCA 90 bp CCGGGCTCGTTCCCCTTGCCGTTGCAGCGCTCACACGTGTCCATGATGTTCACGCAAAAGGGCCTGTGTTaGTGGTTTCCATGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: PGSFPLPLQRSHVSMMFTQKGLC*WFPCRS
Trigger: GCTCCGGCATGGAAACCATCAACACAGGCCCTTTTG...CGTGAACATCATGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR TCA 90 bp GAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGGCCCCCAAGAAGAGCCTaGGCTATAGAAATAAAGAGG +
Preference number: 4 (lower is better)
Translates to: EQLMPRQGPSLGEDGAGGPPRRA*AIEIKR
Trigger: CCTCTTTATTTCTATAGCTCAGGCTCTTCTTGGGGG...CCCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp GCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATGGGGGGGATCGTCACGTTaGTCGTCTCGTACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: ATCYQQRLGNGGSALTEWGGSSR*SSRTGP
Trigger: AGGGCCTGTACGAGACGATCAACGTGACGATCCCCC...CCATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp CGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCCCGGGCTGTCCACTGTaGCCTTTCCGTGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RGERCCPMILLLPRPSRGPGCPL*PFRGER
Trigger: CCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGG...GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp CCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCCGGGCTGTCCACTGTaGCCTTTCCGTGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PWREVLSHDFAVAKAVQRPGCPL*PFRGER
Trigger: CCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGG...CCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATGCCCCACGCTCCCAGTaGAGACAACCTGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDAPRSQ*RQPVRK
Trigger: CTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGGGC...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp TGGGAGCAAGGACTGTACATCCTGACAAGGATCACCACCCACACGGTCAGAGCAACTGAGCAGAGCAGCTaGTGCCTCGGCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: WEQGLYILTRITTHTVRATEQSS*CLGRAP
Trigger: AGGGGCCCTGCCGAGGCATCAGCTGCTCTGCTCAGT...TGCTCTGACCGTGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTTGCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp TGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCACTGAGCAGAGCAGCTaGTGCCTCGGCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: WREVLSHDFAVAKAVQRLTEQSS*CLGRAP
Trigger: AGGGGCCCTGCCGAGGCATCAGCTGCTCTGCTCAGT...GAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp GCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCAGAAGGAGTTCCCAAGGCAGCTaGAGTCTGGCCAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: AAEVWPAQCCNGLWLSRRSSQGS*SLASTV
Trigger: CACTGTGCTGGCCAGACTTCAGCTGCCTTGGGAACT...CCTTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp TGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGGGAGAACCAAGCCCCTaGCTAGCAACAGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: CILLPGLSTVTFPWREVLGEPSP*LATVAG
Trigger: CCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCTCC...CAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp GCCTGGGGGCCCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAGAACCAAGCCCCTaGCTAGCAACAGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AWGPHAPSEDNLSGRTHSGEPSP*LATVAG
Trigger: CCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCTCC...AGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGGGCCCCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp AACTCGCCAAAGATCTTCCTGAACAGCTCCTCGGGGTCCACAGTGGGGCCTCCCCCCAGGATCGAAGCCTaGAGAGCCGTAGGCATCGTA +
Preference number: 4 (lower is better)
Translates to: NSPKIFLNSSSGSTVGPPPRIEA*RAVGIV
Trigger: TACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGG...GGGAGGCCCCACTGTGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR GCA 90 bp ATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCGTTCCCCTTGCCGTTaGAGCGCTCACACGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ILLPGLSTVTFPWREVLSRSPCR*SAHTCP
Trigger: TGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACG...GGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp TGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGCGTTCCCCTTGCCGTTaGAGCGCTCACACGTGTCCA +
Preference number: 4 (lower is better)
Translates to: CCPMILLLPRPSRGSAGGRSPCR*SAHTCP
Trigger: TGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACG...CCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp GTTGCAGCGCTCACACGTGTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCCGGGCTCGTTCCCCTTaGCGTTGCAGCGCTCACACG +
Preference number: 4 (lower is better)
Translates to: VAALTRVHDVHGELLVDPRARSP*RCSAHT
Trigger: CGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCG...GGGGTCAACAAGGAGTTCACCGTGAACATCATGGACACGTGTGAGCGCTGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000575106.5
ENST00000576911.5
ENST00000615114.2
ENST00000633082.1
CDS-3UTR GCA 90 bp TCAGTTCCCAAGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGAATGCTGCACCTTGGTaGCGGGCTCGTTCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: SVPKAAEVWPAQCCNGLWNAAPW*RARSPC
Trigger: GCAAGGGGAACGAGCCCGGCACCAAGGTGCAGCATT...CCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTTGGGAACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp AGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCAGAAAATGCTGCACCTTGGTaGCGGGCTCGTTCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: RQLKSGQHSAAMGCGSAENAAPW*RARSPC
Trigger: GCAAGGGGAACGAGCCCGGCACCAAGGTGCAGCATT...TTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp ATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGCTTGGCTTGTCCTaGTCCCCTGCAGACCACACA +
Preference number: 4 (lower is better)
Translates to: ILLLPRPSRGSAGGSSVLLLGLS*SPADHT
Trigger: TGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAG...CAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp GCCTGGGGGCCCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTCTCAGGATCAGGCTCTaGTGCCGGCTCGTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: AWGPHAPSEDNLSGRTHSLRIRL*CRLVSL
Trigger: GAGGCTAACGAGCCGGCAGCAGAGCCTGATCCTGAG...AGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGGGCCCCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCACCAGCCTCTGGGGCTaGATCCTACTGCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PTLPVKTTCQEELILEPPTSLWG*ILLPGL
Trigger: CAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGT...GGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp ACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCCGGATGGGGTGGGAGCACAATGGACAGGAAACTaGCACCAGCCTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TTGLNSQGQAAIPDGVGAQWTGN*HQPLGL
Trigger: CAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTG...TGCTCCCACCCCATCCGGGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CCCTTTTTCCCACAGGCATCCTCACGGTCTGGCCATCCTCGACTCCTGCAGGCACAATGGACAGGAAACTaGCACCAGCCTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PFFPQASSRSGHPRLLQAQWTGN*HQPLGL
Trigger: CAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTG...TGCCTGCAGGAGTCGAGGATGGCCAGACCGTGAGGATGCCTGTGGGAAAAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR GCA 90 bp GCCTGGGGGCCCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTCTAACCATCTCCCTCTaGCTGAGCCAGGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: AWGPHAPSEDNLSGRTHSLTISL*LSQGPS
Trigger: TGACGGCCCCTGGCTCAGGCAGAGGGAGATGGTTAG...AGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGGGCCCCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CTTTTTCCAGAGCTGGTGAGGGTGACGCCGTTCACCGTCCCCTCCACATCTGTCCTAACCATCTCCCTCTaGCTGAGCCAGGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: LFPELVRVTPFTVPSTSVLTISL*LSQGPS
Trigger: TGACGGCCCCTGGCTCAGGCAGAGGGAGATGGTTAG...GACAGATGTGGAGGGGACGGTGAACGGCGTCACCCTCACCAGCTCTGGAAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR GCA 90 bp TCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGCTCTGGGCCTCTACGTaGCTCCCAGGCACCGACTGT +
Preference number: 4 (lower is better)
Translates to: SPTNGQETATSLWGCILLLWAST*LPGTDC
Trigger: ACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAGAG...CAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGGGCCTCTACGTaGCTCCCAGGCACCGACTGT +
Preference number: 4 (lower is better)
Translates to: PWREVLSHDFAVAKAVQRLWAST*LPGTDC
Trigger: ACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAGAG...CCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp TGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGTGGCCAGCACAGTGCTaGAATGGGCTGTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: CCPMILLLPRPSRGSAGGWPAQC*NGLWLS
Trigger: GCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCA...CCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGTATGCTGGGAGCCGCTaGCCCCAGGATCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SPTNGQETATSLWGCILLYAGSR*PQDRSL
Trigger: CAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATA...CAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp GCGCTCACACGTGTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTGCCCTCGGGGTCCACAGTaGGGCCTCCCTTCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: ALTRVHDVHGELLVDPLCPRGPQ*GLPSSS
Trigger: GCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGG...GCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATGGACACGTGTGAGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CCA 90 bp CAGGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGACACATCTCCTACACGTaGAACGCATCACAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: QVPWPLEGLLLPGLVSSGHISYT*NASQKG
Trigger: GCCCTTTTGTGATGCGTTCCACGTGTAGGAGATGTG...TCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000576911.5
ENST00000612103.4
ENST00000615114.2
CDS-3UTR CCA 90 bp GGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGAACACATCTCCTACACGTaGAACGCATCACAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: GLYVPPRHRLCSCLVPREHISYT*NASQKG
Trigger: GCCCTTTTGTGATGCGTTCCACGTGTAGGAGATGTG...TTCCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp AGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCAGAAGGCATCCTCACGGTCTaGCCATCCTCGACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RQLKSGQHSAAMGCGSAEGILTV*PSSTPA
Trigger: TGCAGGAGTCGAGGATGGCCAGACCGTGAGGATGCC...TTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGGCATCCTCACGGTCTaGCCATCCTCGACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LHPTARAVHCDLSVERGVGILTV*PSSTPA
Trigger: TGCAGGAGTCGAGGATGGCCAGACCGTGAGGATGCC...AACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp CCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGCGGAGCTATCCATaGTGCTGCCACCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSPTNGQETATSLWGCILLRSYP*CCHQSW
Trigger: CCAGCTCTGGTGGCAGCACCATGGATAGCTCCGCAG...TAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR CCA 90 bp CCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACAGAGGCTCTGCGGGTaGGAGCTCAGTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PSPTNGQETATSLWGCILQRLCG*ELSAAV
Trigger: AACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTG...TAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp CTGCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATACTGCCACCAGCCTCTaGGGCTGCATCCTACTGCCC +
Preference number: 4 (lower is better)
Translates to: LRHATSRGWGMGVLLSLNTATSL*GCILLP
Trigger: GGGCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGT...ATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGCCGTCACCTACCAATaGACAGGAAACTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: WGCILLPGLSTVTFPWREAVTYQ*TGNCHQ
Trigger: CTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGC...CTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp TCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCGGCGGCCATCCCGGATaGGGTGGGAGCAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: SMPGLQQQDSIVRDRRPSGGHPG*GGSKDC
Trigger: ACAGTCCTTGCTCCCACCCCATCCGGGATGGCCGCC...GGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CCCAAGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCAGCACAGTGCTGCAATaGGCTGTGGCTCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PKAAEVWPAQCCNGLWLSSTVLQ*AVAQQK
Trigger: CTTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCT...GCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp GAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGGGCTCTCACTGAATGGTaGGGAACCTTCAACTGCTTA +
Preference number: 4 (lower is better)
Translates to: EQLMPRQGPSLGEDGAGGALTEW*GTFNCL
Trigger: TAAGCAGTTGAAGGTTCCCCACCATTCAGTGAGAGC...CCCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CAGGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGATCTGCTCTCACTGAATaGTGGGGAACCTTCAACTGC +
Preference number: 4 (lower is better)
Translates to: QVPWPLEGLLLPGLVSSGSALTE*WGTFNC
Trigger: GCAGTTGAAGGTTCCCCACCATTCAGTGAGAGCAGA...TCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR CCA 90 bp TGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGGCTACCAGCAGAGGCTaGGGAATGGGGGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: CILLPGLSTVTFPWREVLATSRG*GMGVLL
Trigger: GAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGC...CAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTAGCTACCAGCAGAGGCTaGGGAATGGGGGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: PSPTNGQETATSLWGCILATSRG*GMGVLL
Trigger: GAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGC...TAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR CAA 72 bp TTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTaGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: FRGERCCPMILL*PRPSRGSAGGS
Trigger: GCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp TGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGCGCCAAAGATCTTCCTaGACAGCTCCTCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: CCPMILLLPRPSRGSAGGRQRSS*TAPRGP
Trigger: TGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCG...CCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp CTGGGAGCCGCTGGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGCATCGTACTGACCCCCTTTGCAGCTTaGTTGAATGTCAACTCCATG +
Preference number: 4 (lower is better)
Translates to: LGAAGPRIEACRAVGIVLTPFAA*LNVNSM
Trigger: CATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGT...CAGTACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR TCA 90 bp ATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCAAAAGGGCCTGTGTTaGTGGTTTCCATGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: ILLLPRPSRGSAGGSSVLQKGLC*WFPCRS
Trigger: GCTCCGGCATGGAAACCATCAACACAGGCCCTTTTG...CAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp AGAACCAAGCCCCTGACTAGCAACAGTGGCAGGGCTTCAGTTCCCAAGGCAGCTGGGGGATCGTCACGTTaGTCGTCTCGTACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RTKPLTSNSGRASVPKAAGGSSR*SSRTGP
Trigger: AGGGCCTGTACGAGACGATCAACGTGACGATCCCCC...AGCTGCCTTGGGAACTGAAGCCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp TGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGGGAATAAAAACTAACTaGGCAGAGCAGCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: WASTCLPGTDCAAAWYPGGIKTN*AEQLMP
Trigger: AGGCATCAGCTGCTCTGCTCAGTTAGTTTTTATTCC...CCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp TTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGAAGGACTGTACATCCTaGCAAGGATCACCACCCACA +
Preference number: 4 (lower is better)
Translates to: LLLPRPSRGSAGGSSVLLKDCTS*QGSPPT
Trigger: TGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTT...CAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATAGTTCCCAAGGCAGCTaGAGTCTGGCCAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDSSQGS*SLASTV
Trigger: CACTGTGCTGGCCAGACTTCAGCTGCCTTGGGAACT...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp TCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGGGAGAACCAAGCCCCTaGCTAGCAACAGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SPTNGQETATSLWGCILLGEPSP*LATVAG
Trigger: CCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCTCC...CAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp CTGAGCCAGGGGCCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGGTTCTGCTCTCACTaGATGGTGGGGAACCTTCAA +
Preference number: 4 (lower is better)
Translates to: LSQGPSPTNGQETATSLWGFCSH*MVGNLQ
Trigger: TTGAAGGTTCCCCACCATTCAGTGAGAGCAGAACCC...CCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGCCCCTGGCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTGCGGGGACGCTCAGCTTaGGGCTCAGCCATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PVKTTCQEELILEPPGGLRGRSA*GSAMPP
Trigger: TGGGGGCATGGCTGAGCCGCAAGCTGAGCGTCCCCG...CAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp AGCCTGCAGAGCCGTAGGCATCGTACTGCTTCCTCTTCACCTCATCACTCAAAACGGGGACGCTCAGCTTaGGGCTCAGCCATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SLQSRRHRTASSSPHHSKRGRSA*GSAMPP
Trigger: TGGGGGCATGGCTGAGCCGCAAGCTGAGCGTCCCCG...TTTTGAGTGATGAGGTGAAGAGGAAGCAGTACGATGCCTACGGCTCTGCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR GCA 90 bp CGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCCGTTCCCCTTGCCGTTaGAGCGCTCACACGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RGERCCPMILLLPRPSRGRSPCR*SAHTCP
Trigger: TGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACG...GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTTGTCCTGCTCCCCTaGAGACCACACAGGGCGATA +
Preference number: 4 (lower is better)
Translates to: PSPTNGQETATSLWGCILLVLLP*RPHRAI
Trigger: TATCGCCCTGTGTGGTCTGCAGGGGAGCAGGACAAG...TAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTCTTGTCCTGCTCCCCTaGAGACCACACAGGGCGATA +
Preference number: 4 (lower is better)
Translates to: LHPTARAVHCDLSVERGVLVLLP*RPHRAI
Trigger: TATCGCCCTGTGTGGTCTGCAGGGGAGCAGGACAAG...AACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTCTGCTTGGCTTGTCCTaGTCCCCTGCAGACCACACA +
Preference number: 4 (lower is better)
Translates to: LHPTARAVHCDLSVERGVLLGLS*SPADHT
Trigger: TGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAG...AACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGCCTGCTTGGCTTGTCCTaGTCCCCTGCAGACCACACA +
Preference number: 4 (lower is better)
Translates to: HLPMDRKLPPASGAASYCLLGLS*SPADHT
Trigger: TGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAG...GCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGCTTGGCTTGTCCTaGTCCCCTGCAGACCACACA +
Preference number: 4 (lower is better)
Translates to: PSPTNGQETATSLWGCILLLGLS*SPADHT
Trigger: TGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAG...TAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp TGTGTTGATGGTTTCCATGCCGGAGCCGCCACAGTAGTGGCAATGCTGCACCTTGTCGGAGTGGATGTCTaGGCCGTCCCTCCGGAACAC +
Preference number: 4 (lower is better)
Translates to: CVDGFHAGAATVVAMLHLVGVDV*AVPPEH
Trigger: GTGTTCCGGAGGGACGGCGCAGACATCCACTCCGAC...AAGGTGCAGCATTGCCACTACTGTGGCGGCTCCGGCATGGAAACCATCAACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR GCA 90 bp CTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTCAATGGACAGGAAACTaGCACCAGCCTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LHPTARAVHCDLSVERGVQWTGN*HQPLGL
Trigger: CAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTG...AACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGATCTTTTTCCAATGGACAGGAAACTaGCACCAGCCTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LALGGAAASRPSFQWIFFQWTGN*HQPLGL
Trigger: CAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTG...GAAAAAGATCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000576911.5
ENST00000612103.4
ENST00000615114.2
CDS-3UTR GCA 90 bp AGGACTGTACATCCTGACAAGGATCACCACCCACACGGTCAGAGCAGAACCCCCCTAACCATCTCCCTCTaGCTGAGCCAGGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: RTVHPDKDHHPHGQSRTPLTISL*LSQGPS
Trigger: TGACGGCCCCTGGCTCAGGCAGAGGGAGATGGTTAG...GGGGGTTCTGCTCTGACCGTGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp TTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGCCCAGGCACCGACTGTaGAGCTGCTTGGTACCCCGG +
Preference number: 4 (lower is better)
Translates to: FPWREVLSHDFAVAKAVQPRHRL*SCLVPR
Trigger: CCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGG...CTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGATCTTTTTCGGCAGGAGCCCTCCATaGCTGGCTTACAACAACAGG +
Preference number: 4 (lower is better)
Translates to: LALGGAAASRPSFQWIFFGRSPP*LAYNNR
Trigger: CCTGTTGTTGTAAGCCAGGCATGGAGGGCTCCTGCC...GAAAAAGATCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR CCA 90 bp TGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTATGCTGGGAGCCGCTaGCCCCAGGATCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: WREVLSHDFAVAKAVQRLYAGSR*PQDRSL
Trigger: CAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATA...GAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGCCTCGGGGTCCACAGTaGGGCCTCCCTTCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: FPWREVLSHDFAVAKAVQPRGPQ*GLPSSS
Trigger: GCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGG...CTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTCACATCTCCTACACGTaGAACGCATCACAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: CCCQGRPEALRVGAQCCCHISYT*NASQKG
Trigger: GCCCTTTTGTGATGCGTTCCACGTGTAGGAGATGTG...ACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp CATCTGTCTCGTCCTCGGCGTAGCTCAGGATCAGGCTCTGCTGCCGGCTCGTTATCAGTGCTGCTGTTCTaGAATCCTCCCGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: HLSRPRRSSGSGSAAGSLSVLLF*NPPVSQ
Trigger: CTGGGAGACGGGAGGATTCCAGAACAGCAGCACTGA...TAACGAGCCGGCAGCAGAGCCTGATCCTGAGCTACGCCGAGGACGAGACAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR CCA 90 bp ATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGGCCGTCACCTACCAATaGACAGGAAACTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: ILLLPRPSRGSAGGSSVLAVTYQ*TGNCHQ
Trigger: CTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGC...CAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp GTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTTCTGGACTGTGCAGCTGCTTaGTACCCCGGGAATAAAAAC +
Preference number: 4 (lower is better)
Translates to: VAKAVQRLCGWELSAAVLDCAAA*YPGNKN
Trigger: GTTTTTATTCCCGGGGTACCAAGCAGCTGCACAGTC...CAGAACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGGGCGGCCATCCCGGATaGGGTGGGAGCAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: FPWREVLSHDFAVAKAVQGGHPG*GGSKDC
Trigger: ACAGTCCTTGCTCCCACCCCATCCGGGATGGCCGCC...CTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTATGCTGCAATGGGCTGTaGCTCAGCAGAAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PSPTNGQETATSLWGCILCCNGL*LSRRAG
Trigger: TCCTGCCCTTCTGCTGAGCCACAGCCCATTGCAGCA...TAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp GGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGAAGCTCTCACTGAATGGTaGGGAACCTTCAACTGCTTA +
Preference number: 4 (lower is better)
Translates to: GLYVPPRHRLCSCLVPREALTEW*GTFNCL
Trigger: TAAGCAGTTGAAGGTTCCCCACCATTCAGTGAGAGC...TTCCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CACCAGCCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCTCTGCTCTCACTGAATaGTGGGGAACCTTCAACTGC +
Preference number: 4 (lower is better)
Translates to: HQPLGLHPTARAVHCDLSSALTE*WGTFNC
Trigger: GCAGTTGAAGGTTCCCCACCATTCAGTGAGAGCAGA...GGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp TCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGCGCCAAAGATCTTCCTaGACAGCTCCTCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SPTNGQETATSLWGCILLRQRSS*TAPRGP
Trigger: TGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCG...CAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp CCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCGCCAAAGATCTTCCTaGACAGCTCCTCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: PWREVLSHDFAVAKAVQRRQRSS*TAPRGP
Trigger: TGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCG...CCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp CACCAGCCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCACCCCCTTTGCAGCTTaGTTGAATGTCAACTCCATG +
Preference number: 4 (lower is better)
Translates to: HQPLGLHPTARAVHCDLSTPFAA*LNVNSM
Trigger: CATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGT...GGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp TGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGCAAAAGGGCCTGTGTTaGTGGTTTCCATGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: CILLPGLSTVTFPWREVLQKGLC*WFPCRS
Trigger: GCTCCGGCATGGAAACCATCAACACAGGCCCTTTTG...CAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp TTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGCCCCCAAGAAGAGCCTaGGCTATAGAAATAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LLLPRPSRGSAGGSSVLLPPRRA*AIEIKR
Trigger: CCTCTTTATTTCTATAGCTCAGGCTCTTCTTGGGGG...CAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp CCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGGGGATCGTCACGTTaGTCGTCTCGTACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PTLPVKTTCQEELILEPPGGSSR*SSRTGP
Trigger: AGGGCCTGTACGAGACGATCAACGTGACGATCCCCC...GGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp TGTGTTGATGGTTTCCATGCCGGAGCCGCCACAGTAGTGGCAATGCTGCACCTTGGGGGATCGTCACGTTaGTCGTCTCGTACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: CVDGFHAGAATVVAMLHLGGSSR*SSRTGP
Trigger: AGGGCCTGTACGAGACGATCAACGTGACGATCCCCC...AAGGTGCAGCATTGCCACTACTGTGGCGGCTCCGGCATGGAAACCATCAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR TCA 90 bp TTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGCCGGGCTGTCCACTGTaGCCTTTCCGTGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: FPWREVLSHDFAVAKAVQPGCPL*PFRGER
Trigger: CCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGG...CTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp GTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTGCTGCCATCTCCCTCTGCCTaGGCCAGGGGCCGTCACCTA +
Preference number: 4 (lower is better)
Translates to: VKTTCQEELILEPPGGLLPSPSA*ARGRHL
Trigger: TAGGTGACGGCCCCTGGCTCAGGCAGAGGGAGATGG...CAGCAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp CCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGCCCCACGCTCCCAGTaGAGACAACCTGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PTLPVKTTCQEELILEPPAPRSQ*RQPVRK
Trigger: CTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGGGC...GGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp AGAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGGGAATAAAAACTAACTaGGCAGAGCAGCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: RAADASAGPLIRGGRCWWGIKTN*AEQLMP
Trigger: AGGCATCAGCTGCTCTGCTCAGTTAGTTTTTATTCC...CCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp CTGAGCCAGGGGCCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGAAGGACTGTACATCCTaGCAAGGATCACCACCCACA +
Preference number: 4 (lower is better)
Translates to: LSQGPSPTNGQETATSLWKDCTS*QGSPPT
Trigger: TGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTT...CCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGCCCCTGGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CCCTCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCACCCAGGATCGAAGCCTaGAGAGCCGTAGGCATCGTA +
Preference number: 4 (lower is better)
Translates to: PSMPGLQQQDSIVRDRRPPRIEA*RAVGIV
Trigger: TACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGG...TGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CTGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGCTTGTTGACCCCCTTTaGAGCTTGATTGAATGTCAA +
Preference number: 4 (lower is better)
Translates to: LGLYVPPRHRLCSCLVPRLVDPL*SLIECQ
Trigger: TTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAG...CCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CCTCGGGGTCCACAGTGGGGCCTCCCTTCCAGTAGCTATGCTGGGAGCCGCTGGCTTGTTGACCCCCTTTaGAGCTTGATTGAATGTCAA +
Preference number: 4 (lower is better)
Translates to: PRGPQWGLPSSSYAGSRWLVDPL*SLIECQ
Trigger: TTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAG...CCAGCGGCTCCCAGCATAGCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR GCA 90 bp TGTGTTGATGGTTTCCATGCCGGAGCCGCCACAGTAGTGGCAATGCTGCACCTTCGTTCCCCTTGCCGTTaGAGCGCTCACACGTGTCCA +
Preference number: 4 (lower is better)
Translates to: CVDGFHAGAATVVAMLHLRSPCR*SAHTCP
Trigger: TGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACG...AAGGTGCAGCATTGCCACTACTGTGGCGGCTCCGGCATGGAAACCATCAACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR GCA 90 bp GTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTGCTGCGGGCTCGTTCCCCTTaGCGTTGCAGCGCTCACACG +
Preference number: 4 (lower is better)
Translates to: VKTTCQEELILEPPGGLLRARSP*RCSAHT
Trigger: CGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCG...CAGCAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTTGTCCTGCTCCCCTaGAGACCACACAGGGCGATA +
Preference number: 4 (lower is better)
Translates to: PWREVLSHDFAVAKAVQRLVLLP*RPHRAI
Trigger: TATCGCCCTGTGTGGTCTGCAGGGGAGCAGGACAAG...CCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp TGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGAGGATCAGGCTCTGCTaGCGGCTCGTTAGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: CILLPGLSTVTFPWREVLRIRLC*RLVSLF
Trigger: AAAGAGGCTAACGAGCCGGCAGCAGAGCCTGATCCT...CAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTAGGATCAGGCTCTGCTaGCGGCTCGTTAGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LHPTARAVHCDLSVERGVRIRLC*RLVSLF
Trigger: AAAGAGGCTAACGAGCCGGCAGCAGAGCCTGATCCT...AACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp TGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCCTCAGGATCAGGCTCTaGTGCCGGCTCGTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: WREVLSHDFAVAKAVQRLLRIRL*CRLVSL
Trigger: GAGGCTAACGAGCCGGCAGCAGAGCCTGATCCTGAG...GAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CTGCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATCGGGTGGGAGCTCAGTaGTGCTGTTCTGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: LRHATSRGWGMGVLLSLNRVGAQ*CCSGIL
Trigger: GAGGATTCCAGAACAGCAGCACTGAGCTCCCACCCG...ATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp TCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGCGGGTGGGAGCTCAGTaGTGCTGTTCTGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: SPTNGQETATSLWGCILLRVGAQ*CCSGIL
Trigger: GAGGATTCCAGAACAGCAGCACTGAGCTCCCACCCG...CAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp AGAACCAAGCCCCTGACTAGCAACAGTGGCAGGGCTTCAGTTCCCAAGGCAGCTGGCAGGAGCCCTCCATaGCTGGCTTACAACAACAGG +
Preference number: 4 (lower is better)
Translates to: RTKPLTSNSGRASVPKAAGRSPP*LAYNNR
Trigger: CCTGTTGTTGTAAGCCAGGCATGGAGGGCTCCTGCC...AGCTGCCTTGGGAACTGAAGCCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp TCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCTGGCCAGCACAGTGCTaGAATGGGCTGTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SMPGLQQQDSIVRDRRPSWPAQC*NGLWLS
Trigger: GCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCA...GGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCTGGCCAGCACAGTGCTaGAATGGGCTGTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PTLPVKTTCQEELILEPPWPAQC*NGLWLS
Trigger: GCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCA...GGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp TGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGATGGAAACTGCGACATaGTACCAGCAGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CILLPGLSTVTFPWREVLMETAT*YQQRLG
Trigger: CCCCAGCCTCTGCTGGTAGCATGTCGCAGTTTCCAT...CAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGCCAGCAACCAGCGTGTaGAGCACCGCGCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: FPWREVLSHDFAVAKAVQPATSV*STAQPS
Trigger: AGATGGCTGCGCGGTGCTCCACACGCTGGTTGCTGG...CTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp GAAGAGGATGAGAACTCGCCAAAGATCTTCCTGAACAGCTCCTCGGGGTCCACACCAGCAACCAGCGTGTaGAGCACCGCGCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: EEDENSPKIFLNSSSGSTPATSV*STAQPS
Trigger: AGATGGCTGCGCGGTGCTCCACACGCTGGTTGCTGG...TGTGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTTCTCATCCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CCA 90 bp CAGGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGATTCTTGATCTCTTTCTaGCTGGCATTTCGAGGCACT +
Preference number: 4 (lower is better)
Translates to: QVPWPLEGLLLPGLVSSGFLISF*LAFRGT
Trigger: AGTGCCTCGAAATGCCAGCCAGAAAGAGATCAAGAA...TCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR CCA 90 bp CTGGGAGCCGCTGGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGCATCGTACTGGGGAGAACTTCTCCTTaGCTTTGGGATCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: LGAAGPRIEACRAVGIVLGRTSP*LWDHPY
Trigger: ATAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCC...CAGTACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CCA 90 bp GCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATGGCTCGCTTTTTCTGCTTaGCTTGTCCTGCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: ATCYQQRLGNGGSALTEWLAFSA*LVLLPC
Trigger: GCAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAG...CCATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTTTTTCCAGAGCTGGTGAGGGTGACGCCGTTCACCGTCCCCTCCACATCTGTCCTCGCTTTTTCTGCTTaGCTTGTCCTGCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LFPELVRVTPFTVPSTSVLAFSA*LVLLPC
Trigger: GCAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAG...GACAGATGTGGAGGGGACGGTGAACGGCGTCACCCTCACCAGCTCTGGAAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR CCA 90 bp GCCTGGGGGCCCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTATAAAGAGGTCGGAGTaGATGTCTGCGCCGTCCCTC +
Preference number: 4 (lower is better)
Translates to: AWGPHAPSEDNLSGRTHSIKRSE*MSAPSL
Trigger: GAGGGACGGCGCAGACATCCACTCCGACCTCTTTAT...AGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGGGCCCCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGATAAAGAGGTCGGAGTaGATGTCTGCGCCGTCCCTC +
Preference number: 4 (lower is better)
Translates to: CCPMILLLPRPSRGSAGGIKRSE*MSAPSL
Trigger: GAGGGACGGCGCAGACATCCACTCCGACCTCTTTAT...CCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp TGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGAGGAAGAACTCATTCTaGAACCTCCCGGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: WGCILLPGLSTVTFPWRERKNSF*NLPEVC
Trigger: GCAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCT...CTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTGAGCCAGGGGCCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGACTGTGCAGCTGCTTaGTACCCCGGGAATAAAAAC +
Preference number: 4 (lower is better)
Translates to: LSQGPSPTNGQETATSLWDCAAA*YPGNKN
Trigger: GTTTTTATTCCCGGGGTACCAAGCAGCTGCACAGTC...CCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGCCCCTGGCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTGCCCCCAGGGACTCTCTaGGCCTCTACGTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PVKTTCQEELILEPPGGLPPGTL*ASTCLP
Trigger: TGGGAGGCACGTAGAGGCCCAGAGAGTCCCTGGGGG...CAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTGCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATCCATCCCGGATGGGGTaGGAGCAAGGACTGTACATC +
Preference number: 4 (lower is better)
Translates to: LRHATSRGWGMGVLLSLNPSRMG*EQGLYI
Trigger: GATGTACAGTCCTTGCTCCCACCCCATCCGGGATGG...ATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CCCTCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCACCATCCCGGATGGGGTaGGAGCAAGGACTGTACATC +
Preference number: 4 (lower is better)
Translates to: PSMPGLQQQDSIVRDRRPPSRMG*EQGLYI
Trigger: GATGTACAGTCCTTGCTCCCACCCCATCCGGGATGG...TGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATGGAGCCCTCCATGCCTaGCTTACAACAACAGGACTC +
Preference number: 4 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDGALHA*LTTTGL
Trigger: GAGTCCTGTTGTTGTAAGCCAGGCATGGAGGGCTCC...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp ATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCAGCACAGTGCTGCAATaGGCTGTGGCTCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ILLPGLSTVTFPWREVLSSTVLQ*AVAQQK
Trigger: CTTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCT...GGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCGCTACCAGCAGAGGCTaGGGAATGGGGGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SMPGLQQQDSIVRDRRPSATSRG*GMGVLL
Trigger: GAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGC...GGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp GCGCTCACACGTGTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTGCCGCCAAAGATCTTCCTaGACAGCTCCTCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: ALTRVHDVHGELLVDPLCRQRSS*TAPRGP
Trigger: TGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCG...GCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATGGACACGTGTGAGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR TCA 90 bp TGGGAGCAAGGACTGTACATCCTGACAAGGATCACCACCCACACGGTCAGAGCACGCCAAAGATCTTCCTaGACAGCTCCTCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: WEQGLYILTRITTHTVRARQRSS*TAPRGP
Trigger: TGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCG...TGCTCTGACCGTGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTTGCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp CCTGAACAGCTCCTCGGGGTCCACAGTGGGGCCTCCCTTCCAGTAGCTATGCTGACCCCCTTTGCAGCTTaGTTGAATGTCAACTCCATG +
Preference number: 4 (lower is better)
Translates to: PEQLLGVHSGASLPVAMLTPFAA*LNVNSM
Trigger: CATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGT...CAGCATAGCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGGAGCTGTTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR TCA 90 bp CGATATGATGATGGAGCCGCGGCCACCACATCTCCTACACGTGGAACGCATCACCAAAAGGGCCTGTGTTaGTGGTTTCCATGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RYDDGAAATTSPTRGTHHQKGLC*WFPCRS
Trigger: GCTCCGGCATGGAAACCATCAACACAGGCCCTTTTG...GTGATGCGTTCCACGTGTAGGAGATGTGGTGGCCGCGGCTCCATCATCATATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR TCA 90 bp TTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTTGGAACTCGTATCTTaGTGTGGATGTAGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LLLPRPSRGSAGGSSVLLLELVS*CGCSGL
Trigger: GAGACCACTACATCCACATCAAGATACGAGTTCCAA...CAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp CCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGTTGGAACTCGTATCTTaGTGTGGATGTAGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: PLGLHPTARAVHCDLSVELELVS*CGCSGL
Trigger: GAGACCACTACATCCACATCAAGATACGAGTTCCAA...CTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp TCTGCTCTCACTGAATGGTGGGGAACCTTCAACTGCTTAGCCTGTGCTTTCCTTCCATCTCCCTCTGCCTaGGCCAGGGGCCGTCACCTA +
Preference number: 4 (lower is better)
Translates to: SALTEWWGTFNCLACAFLPSPSA*ARGRHL
Trigger: TAGGTGACGGCCCCTGGCTCAGGCAGAGGGAGATGG...AAGGAAAGCACAGGCTAAGCAGTTGAAGGTTCCCCACCATTCAGTGAGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp CTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTGGAGAACCAAGCCCCTaGCTAGCAACAGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPVKTTCQEELILEPPGGGEPSP*LATVAG
Trigger: CCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCTCC...ACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp GCCTGGGGGCCCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGGTTCTGCTCTCACTaGATGGTGGGGAACCTTCAA +
Preference number: 4 (lower is better)
Translates to: AWGPHAPSEDNLSGRTHSGFCSH*MVGNLQ
Trigger: TTGAAGGTTCCCCACCATTCAGTGAGAGCAGAACCC...AGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGGGCCCCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp AACTCGCCAAAGATCTTCCTGAACAGCTCCTCGGGGTCCACAGTGGGGCCTCCCAACCTCATAGGCTTCTaGCAGCTGGGAGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: NSPKIFLNSSSGSTVGPPNLIGF*QLGELL
Trigger: GAGAAGTTCTCCCAGCTGGCAGAAGCCTATGAGGTT...GGGAGGCCCCACTGTGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR GCA 90 bp TCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCCCCAGGATCGAAGCCTaGAGAGCCGTAGGCATCGTA +
Preference number: 4 (lower is better)
Translates to: SMPGLQQQDSIVRDRRPSPRIEA*RAVGIV
Trigger: TACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGG...GGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CAGGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGACTTGTTGACCCCCTTTaGAGCTTGATTGAATGTCAA +
Preference number: 4 (lower is better)
Translates to: QVPWPLEGLLLPGLVSSGLVDPL*SLIECQ
Trigger: TTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAG...TCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000576911.5
ENST00000612103.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCCTGCTTGGCTTGTCCTaGTCCCCTGCAGACCACACA +
Preference number: 4 (lower is better)
Translates to: PTLPVKTTCQEELILEPPLLGLS*SPADHT
Trigger: TGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAG...GGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CAGGGCGATATGATGATGGAGCCGCGGCCACCACATCTCCTACACGTGGAACGCATCACTCGCTTTTTCTaGTTGGCTTGTCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: QGDMMMEPRPPHLLHVERITRFF*LACPAP
Trigger: GGGAGCAGGACAAGCCAAGCAGAAAAAGCGAGTGAT...GCGTTCCACGTGTAGGAGATGTGGTGGCCGCGGCTCCATCATCATATCGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR GCA 90 bp CCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTGGTCGGAGTGGATGTCTaGGCCGTCCCTCCGGAACAC +
Preference number: 4 (lower is better)
Translates to: PVKTTCQEELILEPPGGLVGVDV*AVPPEH
Trigger: GTGTTCCGGAGGGACGGCGCAGACATCCACTCCGAC...CAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp TCTGCTCTCACTGAATGGTGGGGAACCTTCAACTGCTTAGCCTGTGCTTTCCTTCCCAGGCACCGACTGTaGAGCTGCTTGGTACCCCGG +
Preference number: 4 (lower is better)
Translates to: SALTEWWGTFNCLACAFLPRHRL*SCLVPR
Trigger: CCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGG...AAGGAAAGCACAGGCTAAGCAGTTGAAGGTTCCCCACCATTCAGTGAGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGCAGGAGCCCTCCATaGCTGGCTTACAACAACAGG +
Preference number: 4 (lower is better)
Translates to: PTLPVKTTCQEELILEPPGRSPP*LAYNNR
Trigger: CCTGTTGTTGTAAGCCAGGCATGGAGGGCTCCTGCC...GGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTGGGAGCCGCTGGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGCATCGTACTGGATAATAATCTTCTTTaGCCAAAGGGGCACTCGTGT +
Preference number: 4 (lower is better)
Translates to: LGAAGPRIEACRAVGIVLDNNLL*PKGHSC
Trigger: ACACGAGTGCCCCTTTGGCCAAAGAAGATTATTATC...CAGTACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CCA 90 bp GAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGGACTTCTCCTTGGCTTTaGGATCATCCTTATTTGTGT +
Preference number: 4 (lower is better)
Translates to: EQLMPRQGPSLGEDGAGGTSPWL*DHPYLC
Trigger: ACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGT...CCCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTGGGAGAACTTCTCCTTaGCTTTGGGATCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: CCCQGRPEALRVGAQCCCGRTSP*LWDHPY
Trigger: ATAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCC...ACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp AATGAAGAGGATGAGAACTCGCCAAAGATCTTCCTGAACAGCTCCTCGGGGTCCTATGCTGGGAGCCGCTaGCCCCAGGATCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: NEEDENSPKIFLNSSSGSYAGSR*PQDRSL
Trigger: CAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATA...GGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTTCTCATCCTCTTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CCA 90 bp AGCCTGCAGAGCCGTAGGCATCGTACTGCTTCCTCTTCACCTCATCACTCAAAATATGCTGGGAGCCGCTaGCCCCAGGATCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SLQSRRHRTASSSPHHSKYAGSR*PQDRSL
Trigger: CAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATA...TTTTGAGTGATGAGGTGAAGAGGAAGCAGTACGATGCCTACGGCTCTGCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CCA 90 bp CTGCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATCTCGCTTTTTCTGCTTaGCTTGTCCTGCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LRHATSRGWGMGVLLSLNLAFSA*LVLLPC
Trigger: GCAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAG...ATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CGCTCACACGTGTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTGCAGGCATCCTCACGGTCTaGCCATCCTCGACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RSHVSMMFTVNSLLTPFAGILTV*PSSTPA
Trigger: TGCAGGAGTCGAGGATGGCCAGACCGTGAGGATGCC...TGCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATGGACACGTGTGAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR CCA 90 bp ACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCGGCATCCTCACGGTCTaGCCATCCTCGACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TFPWREVLSHDFAVAKAVGILTV*PSSTPA
Trigger: TGCAGGAGTCGAGGATGGCCAGACCGTGAGGATGCC...GACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp TCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGATAAAGAGGTCGGAGTaGATGTCTGCGCCGTCCCTC +
Preference number: 4 (lower is better)
Translates to: SPTNGQETATSLWGCILLIKRSE*MSAPSL
Trigger: GAGGGACGGCGCAGACATCCACTCCGACCTCTTTAT...CAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp ATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCGGCCTAGTTTCCAGTaGATCTTTTTCCTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: ILLPGLSTVTFPWREVLSRPSFQ*IFFLGW
Trigger: CCAGCCGAGGAAAAAGATCCACTGGAAACTAGGCCG...GGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR CCA 90 bp AGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCAGAACGGCCTAGTTTCCAGTaGATCTTTTTCCTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: RQLKSGQHSAAMGCGSAERPSFQ*IFFLGW
Trigger: CCAGCCGAGGAAAAAGATCCACTGGAAACTAGGCCG...TTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR CCA 90 bp CCCTCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCAGTGCTGCTGTTCTaGAATCCTCCCGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PSMPGLQQQDSIVRDRRPSVLLF*NPPVSQ
Trigger: CTGGGAGACGGGAGGATTCCAGAACAGCAGCACTGA...TGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTCAGAGGCTCTGCGGGTaGGAGCTCAGTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LPVKTTCQEELILEPPGGQRLCG*ELSAAV
Trigger: AACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTG...ACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp AGAACCAAGCCCCTGACTAGCAACAGTGGCAGGGCTTCAGTTCCCAAGGCAGCTGCCGTCACCTACCAATaGACAGGAAACTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: RTKPLTSNSGRASVPKAAAVTYQ*TGNCHQ
Trigger: CTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGC...AGCTGCCTTGGGAACTGAAGCCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCTGCAATGGGCTGTaGCTCAGCAGAAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: WREVLSHDFAVAKAVQRLCCNGL*LSRRAG
Trigger: TCCTGCCCTTCTGCTGAGCCACAGCCCATTGCAGCA...GAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGAGCACAGTGCTGCAATaGGCTGTGGCTCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PWREVLSHDFAVAKAVQRSTVLQ*AVAQQK
Trigger: CTTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCT...CCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp TGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTGATAATAGGCTTTCTTaGTCTCTTTCTGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: CCCQGRPEALRVGAQCCCDNRLS*SLSGWH
Trigger: ATGCCAGCCAGAAAGAGATCAAGAAAGCCTATTATC...ACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp GCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCAGAAGGACCCCCTTTGCAGCTTaGTTGAATGTCAACTCCATG +
Preference number: 4 (lower is better)
Translates to: AAEVWPAQCCNGLWLSRRTPFAA*LNVNSM
Trigger: CATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGT...CCTTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp ATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGACCCCCTTTGCAGCTTaGTTGAATGTCAACTCCATG +
Preference number: 4 (lower is better)
Translates to: ILLLPRPSRGSAGGSSVLTPFAA*LNVNSM
Trigger: CATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGT...CAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp CTGAGCCAGGGGCCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGAATAAAAACTAACTaGGCAGAGCAGCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: LSQGPSPTNGQETATSLWGIKTN*AEQLMP
Trigger: AGGCATCAGCTGCTCTGCTCAGTTAGTTTTTATTCC...CCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGCCCCTGGCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp TGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGAAGGACTGTACATCCTaGCAAGGATCACCACCCACA +
Preference number: 4 (lower is better)
Translates to: CILLPGLSTVTFPWREVLKDCTS*QGSPPT
Trigger: TGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTT...CAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp ACACGTGTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTGCAGCTTGCGTTCCCCTTGCCGTTaGAGCGCTCACACGTGTCCA +
Preference number: 4 (lower is better)
Translates to: TRVHDVHGELLVDPLCSLRSPCR*SAHTCP
Trigger: TGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACG...CAAGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATGGACACGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000575106.5
ENST00000576911.5
ENST00000615114.2
ENST00000633082.1
CDS-3UTR GCA 90 bp AATGAAGAGGATGAGAACTCGCCAAAGATCTTCCTGAACAGCTCCTCGGGGTCCCGTTCCCCTTGCCGTTaGAGCGCTCACACGTGTCCA +
Preference number: 4 (lower is better)
Translates to: NEEDENSPKIFLNSSSGSRSPCR*SAHTCP
Trigger: TGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACG...GGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTTCTCATCCTCTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR GCA 90 bp ACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCTGCTTGGCTTGTCCTaGTCCCCTGCAGACCACACA +
Preference number: 4 (lower is better)
Translates to: TFPWREVLSHDFAVAKAVLLGLS*SPADHT
Trigger: TGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAG...GACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTATCACTCGCTTTTTCTaGTTGGCTTGTCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LHPTARAVHCDLSVERGVITRFF*LACPAP
Trigger: GGGAGCAGGACAAGCCAAGCAGAAAAAGCGAGTGAT...AACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTAATCACTCGCTTTTTCTaGTTGGCTTGTCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PSPTNGQETATSLWGCILITRFF*LACPAP
Trigger: GGGAGCAGGACAAGCCAAGCAGAAAAAGCGAGTGAT...TAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp TCTGCTCTCACTGAATGGTGGGGAACCTTCAACTGCTTAGCCTGTGCTTTCCTTGTCGGAGTGGATGTCTaGGCCGTCCCTCCGGAACAC +
Preference number: 4 (lower is better)
Translates to: SALTEWWGTFNCLACAFLVGVDV*AVPPEH
Trigger: GTGTTCCGGAGGGACGGCGCAGACATCCACTCCGAC...AAGGAAAGCACAGGCTAAGCAGTTGAAGGTTCCCCACCATTCAGTGAGAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp TCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCAGGATCAGGCTCTGCTaGCGGCTCGTTAGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: SMPGLQQQDSIVRDRRPSRIRLC*RLVSLF
Trigger: AAAGAGGCTAACGAGCCGGCAGCAGAGCCTGATCCT...GGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp TCTGCTCTCACTGAATGGTGGGGAACCTTCAACTGCTTAGCCTGTGCTTTCCTTCTCTGGGCCTCTACGTaGCTCCCAGGCACCGACTGT +
Preference number: 4 (lower is better)
Translates to: SALTEWWGTFNCLACAFLLWAST*LPGTDC
Trigger: ACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAGAG...AAGGAAAGCACAGGCTAAGCAGTTGAAGGTTCCCCACCATTCAGTGAGAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp TGGGAGCAAGGACTGTACATCCTGACAAGGATCACCACCCACACGGTCAGAGCAATGGAAACTGCGACATaGTACCAGCAGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: WEQGLYILTRITTHTVRAMETAT*YQQRLG
Trigger: CCCCAGCCTCTGCTGGTAGCATGTCGCAGTTTCCAT...TGCTCTGACCGTGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTTGCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp ATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCAAAGGGGCACTCGTGTaGAAGGAGGCAGTACAAATG +
Preference number: 4 (lower is better)
Translates to: ILLPGLSTVTFPWREVLSKGALV*KEAVQM
Trigger: CATTTGTACTGCCTCCTTCCACACGAGTGCCCCTTT...GGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTGATAATAATCTTCTTTaGCCAAAGGGGCACTCGTGT +
Preference number: 4 (lower is better)
Translates to: CCCQGRPEALRVGAQCCCDNNLL*PKGHSC
Trigger: ACACGAGTGCCCCTTTGGCCAAAGAAGATTATTATC...ACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp AGTAGCTATGCTGGGAGCCGCTGGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGCAGGGTGATACTTCTTaGCAAGCTGATAATAGGCTT +
Preference number: 4 (lower is better)
Translates to: SSYAGSRWPQDRSLQSRRQGDTS*QADNRL
Trigger: AAGCCTATTATCAGCTTGCCAAGAAGTATCACCCTG...CCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATAGCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CCA 90 bp CCTGAACAGCTCCTCGGGGTCCACAGTGGGGCCTCCCTTCCAGTAGCTATGCTGGGGAGAACTTCTCCTTaGCTTTGGGATCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: PEQLLGVHSGASLPVAMLGRTSP*LWDHPY
Trigger: ATAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCC...CAGCATAGCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGGAGCTGTTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CCA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATCACATCTCCTACACGTaGAACGCATCACAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDHISYT*NASQKG
Trigger: GCCCTTTTGTGATGCGTTCCACGTGTAGGAGATGTG...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp TGGGAGCAAGGACTGTACATCCTGACAAGGATCACCACCCACACGGTCAGAGCAATAAAGAGGTCGGAGTaGATGTCTGCGCCGTCCCTC +
Preference number: 4 (lower is better)
Translates to: WEQGLYILTRITTHTVRAIKRSE*MSAPSL
Trigger: GAGGGACGGCGCAGACATCCACTCCGACCTCTTTAT...TGCTCTGACCGTGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTTGCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TGGGAGCAAGGACTGTACATCCTGACAAGGATCACCACCCACACGGTCAGAGCATCAGTGCTGCTGTTCTaGAATCCTCCCGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: WEQGLYILTRITTHTVRASVLLF*NPPVSQ
Trigger: CTGGGAGACGGGAGGATTCCAGAACAGCAGCACTGA...TGCTCTGACCGTGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTTGCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp GCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATGGACTGTGACCTTTCCGTaGAGAGAGGTGTTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: ATCYQQRLGNGGSALTEWTVTFP*REVLSH
Trigger: ATGGGACAACACCTCTCTCCACGGAAAGGTCACAGT...CCATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATACTGTGACCTTTCCGTaGAGAGAGGTGTTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDTVTFP*REVLSH
Trigger: ATGGGACAACACCTCTCTCCACGGAAAGGTCACAGT...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp CACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGCAGGAAGAACTCATTCTaGAACCTCCCGGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: HLPMDRKLPPASGAASYCRKNSF*NLPEVC
Trigger: GCAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCT...GCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATGACTGTGCAGCTGCTTaGTACCCCGGGAATAAAAAC +
Preference number: 4 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDDCAAA*YPGNKN
Trigger: GTTTTTATTCCCGGGGTACCAAGCAGCTGCACAGTC...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTGCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATAAGGCAGCTGAAGTCTaGCCAGCACAGTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: LRHATSRGWGMGVLLSLNKAAEV*PAQCCN
Trigger: ATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTT...ATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp ATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCTCTGCTCTCACTGAATaGTGGGGAACCTTCAACTGC +
Preference number: 4 (lower is better)
Translates to: ILLPGLSTVTFPWREVLSSALTE*WGTFNC
Trigger: GCAGTTGAAGGTTCCCCACCATTCAGTGAGAGCAGA...GGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTTCTGCTCTCACTGAATaGTGGGGAACCTTCAACTGC +
Preference number: 4 (lower is better)
Translates to: LHPTARAVHCDLSVERGVSALTE*WGTFNC
Trigger: GCAGTTGAAGGTTCCCCACCATTCAGTGAGAGCAGA...AACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp GCCAAAGATCTTCCTGAACAGCTCCTCGGGGTCCACAGTGGGGCCTCCCTTCCACAGGGTGATACTTCTTaGCAAGCTGTAAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: AKDLPEQLLGVHSGASLPQGDTS*QAVRLT
Trigger: TGTCAGCCTTACAGCTTGCCAAGAAGTATCACCCTG...TGGAAGGGAGGCCCCACTGTGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570857.5
ENST00000631547.1
CDS-3UTR TCA 90 bp TTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGCAAAAGGGCCTGTGTTaGTGGTTTCCATGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: FPWREVLSHDFAVAKAVQQKGLC*WFPCRS
Trigger: GCTCCGGCATGGAAACCATCAACACAGGCCCTTTTG...CTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp CCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACCCCCAAGAAGAGCCTaGGCTATAGAAATAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PSPTNGQETATSLWGCILPPRRA*AIEIKR
Trigger: CCTCTTTATTTCTATAGCTCAGGCTCTTCTTGGGGG...TAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp CCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAATCACTTCGTAACTTaGTGCAGCTTAAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: PLGLHPTARAVHCDLSVENHFVT*CSLRLH
Trigger: ATGAAGCCTTAAGCTGCATCAAGTTACGAAGTGATT...CTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp GCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCAGAAGGGGAATAAAAACTAACTaGGCAGAGCAGCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: AAEVWPAQCCNGLWLSRRGIKTN*AEQLMP
Trigger: AGGCATCAGCTGCTCTGCTCAGTTAGTTTTTATTCC...CCTTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp AGAACCAAGCCCCTGACTAGCAACAGTGGCAGGGCTTCAGTTCCCAAGGCAGCTAAGGACTGTACATCCTaGCAAGGATCACCACCCACA +
Preference number: 4 (lower is better)
Translates to: RTKPLTSNSGRASVPKAAKDCTS*QGSPPT
Trigger: TGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTT...AGCTGCCTTGGGAACTGAAGCCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp GTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTGCTGAGTTCCCAAGGCAGCTaGAGTCTGGCCAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: VKTTCQEELILEPPGGLLSSQGS*SLASTV
Trigger: CACTGTGCTGGCCAGACTTCAGCTGCCTTGGGAACT...CAGCAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp TGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCGGGTTCTGCTCTCACTaGATGGTGGGGAACCTTCAA +
Preference number: 4 (lower is better)
Translates to: WREVLSHDFAVAKAVQRLGFCSH*MVGNLQ
Trigger: TTGAAGGTTCCCCACCATTCAGTGAGAGCAGAACCC...GAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp AGAACCAAGCCCCTGACTAGCAACAGTGGCAGGGCTTCAGTTCCCAAGGCAGCTAACCTCATAGGCTTCTaGCAGCTGGGAGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: RTKPLTSNSGRASVPKAANLIGF*QLGELL
Trigger: GAGAAGTTCTCCCAGCTGGCAGAAGCCTATGAGGTT...AGCTGCCTTGGGAACTGAAGCCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp TCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGAACCTCATAGGCTTCTaGCAGCTGGGAGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: SPTNGQETATSLWGCILLNLIGF*QLGELL
Trigger: GAGAAGTTCTCCCAGCTGGCAGAAGCCTATGAGGTT...CAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp ACACGTGTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTGCAGCTTGCTTGTCCTGCTCCCCTaGAGACCACACAGGGCGATA +
Preference number: 4 (lower is better)
Translates to: TRVHDVHGELLVDPLCSLLVLLP*RPHRAI
Trigger: TATCGCCCTGTGTGGTCTGCAGGGGAGCAGGACAAG...CAAGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATGGACACGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR GCA 90 bp TCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGATCACTCGCTTTTTCTaGTTGGCTTGTCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SPTNGQETATSLWGCILLITRFF*LACPAP
Trigger: GGGAGCAGGACAAGCCAAGCAGAAAAAGCGAGTGAT...CAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp ACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCAGGATCAGGCTCTGCTaGCGGCTCGTTAGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: TFPWREVLSHDFAVAKAVRIRLC*RLVSLF
Trigger: AAAGAGGCTAACGAGCCGGCAGCAGAGCCTGATCCT...GACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp TCTGCTCTCACTGAATGGTGGGGAACCTTCAACTGCTTAGCCTGTGCTTTCCTTCTCAGGATCAGGCTCTaGTGCCGGCTCGTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: SALTEWWGTFNCLACAFLLRIRL*CRLVSL
Trigger: GAGGCTAACGAGCCGGCAGCAGAGCCTGATCCTGAG...AAGGAAAGCACAGGCTAAGCAGTTGAAGGTTCCCCACCATTCAGTGAGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp ACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCCTAGCCTTGCTTCCTaGGGAGCTATCCATGGTGCT +
Preference number: 4 (lower is better)
Translates to: TFPWREVLSHDFAVAKAVPSLAS*GAIHGA
Trigger: AGCACCATGGATAGCTCCGCAGGAAGCAAGGCTAGG...GACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR CCA 90 bp GTTCACGGTGAACTCCTTGTTGACCCCCTTTGCAGCTTGATTGAATGTCAACTCCCAGCAACCAGCGTGTaGAGCACCGCGCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: VHGELLVDPLCSLIECQLPATSV*STAQPS
Trigger: AGATGGCTGCGCGGTGCTCCACACGCTGGTTGCTGG...GAGTTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CCA 90 bp AGAACCAAGCCCCTGACTAGCAACAGTGGCAGGGCTTCAGTTCCCAAGGCAGCTAAAGGGGCACTCGTGTaGAAGGAGGCAGTACAAATG +
Preference number: 4 (lower is better)
Translates to: RTKPLTSNSGRASVPKAAKGALV*KEAVQM
Trigger: CATTTGTACTGCCTCCTTCCACACGAGTGCCCCTTT...AGCTGCCTTGGGAACTGAAGCCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp GCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCAGAAGGTTCTTGATCTCTTTCTaGCTGGCATTTCGAGGCACT +
Preference number: 4 (lower is better)
Translates to: AAEVWPAQCCNGLWLSRRFLISF*LAFRGT
Trigger: AGTGCCTCGAAATGCCAGCCAGAAAGAGATCAAGAA...CCTTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTGAGCCTCGGGGTCCACAGTaGGGCCTCCCTTCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: FQIRVLALQESNHLPLPEPRGPQ*GLPSSS
Trigger: GCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGG...CTCAGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp AGAACCAAGCCCCTGACTAGCAACAGTGGCAGGGCTTCAGTTCCCAAGGCAGCTAGGAAGAACTCATTCTaGAACCTCCCGGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: RTKPLTSNSGRASVPKAARKNSF*NLPEVC
Trigger: GCAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCT...AGCTGCCTTGGGAACTGAAGCCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CCCTCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCAGACTGTGCAGCTGCTTaGTACCCCGGGAATAAAAAC +
Preference number: 4 (lower is better)
Translates to: PSMPGLQQQDSIVRDRRPDCAAA*YPGNKN
Trigger: GTTTTTATTCCCGGGGTACCAAGCAGCTGCACAGTC...TGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp ACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCGGAGCCCTCCATGCCTaGCTTACAACAACAGGACTC +
Preference number: 4 (lower is better)
Translates to: TFPWREVLSHDFAVAKAVGALHA*LTTTGL
Trigger: GAGTCCTGTTGTTGTAAGCCAGGCATGGAGGGCTCC...GACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp TCGTTCCCCTTGCCGTTGCAGCGCTCACACGTGTCCATGATGTTCACGGTGAACACCCCCTTTGCAGCTTaGTTGAATGTCAACTCCATG +
Preference number: 4 (lower is better)
Translates to: SFPLPLQRSHVSMMFTVNTPFAA*LNVNSM
Trigger: CATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGT...GTTCACCGTGAACATCATGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000575106.5
ENST00000576911.5
ENST00000615114.2
ENST00000633082.1
CDS-3UTR TCA 90 bp TCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGCCCCCAAGAAGAGCCTaGGCTATAGAAATAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SPTNGQETATSLWGCILLPPRRA*AIEIKR
Trigger: CCTCTTTATTTCTATAGCTCAGGCTCTTCTTGGGGG...CAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp TGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGTCGGCTGGGATATCATaGGGTAAACATTTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: WGCILLPGLSTVTFPWRESAGIS*GKHFLK
Trigger: CTTAAGAAAATGTTTACCTCATGATATCCCAGCCGA...CTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR TCA 90 bp TTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTGAGCCGGGCTGTCCACTGTaGCCTTTCCGTGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: FQIRVLALQESNHLPLPEPGCPL*PFRGER
Trigger: CCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGG...CTCAGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp TTTCCATGCCGGAGCCGCCACAGTAGTGGCAATGCTGCACCTTGGTGCCGGGCTAATCACTTCGTAACTTaGTGCAGCTTAAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: FPCRSRHSSGNAAPWCRANHFVT*CSLRLH
Trigger: ATGAAGCCTTAAGCTGCATCAAGTTACGAAGTGATT...AGCCCGGCACCAAGGTGCAGCATTGCCACTACTGTGGCGGCTCCGGCATGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR TCA 90 bp ACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCGGGTTCTGCTCTCACTaGATGGTGGGGAACCTTCAA +
Preference number: 4 (lower is better)
Translates to: TFPWREVLSHDFAVAKAVGFCSH*MVGNLQ
Trigger: TTGAAGGTTCCCCACCATTCAGTGAGAGCAGAACCC...GACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CAGGATCGAAGCCTGCAGAGCCGTAGGCATCGTACTGCTTCCTCTTCACCTCATAACCTCATAGGCTTCTaGCAGCTGGGAGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: QDRSLQSRRHRTASSSPHNLIGF*QLGELL
Trigger: GAGAAGTTCTCCCAGCTGGCAGAAGCCTATGAGGTT...ATGAGGTGAAGAGGAAGCAGTACGATGCCTACGGCTCTGCAGGCTTCGATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR GCA 90 bp CAATTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTCGGGCTCGTTCCCCTTaGCGTTGCAGCGCTCACACG +
Preference number: 4 (lower is better)
Translates to: QFQIRVLALQESNHLPLPRARSP*RCSAHT
Trigger: CGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCG...AGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp TTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTGAGGTCGGAGTGGATGTCTaGGCCGTCCCTCCGGAACAC +
Preference number: 4 (lower is better)
Translates to: FQIRVLALQESNHLPLPEVGVDV*AVPPEH
Trigger: GTGTTCCGGAGGGACGGCGCAGACATCCACTCCGAC...CTCAGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp TGGGAGCAAGGACTGTACATCCTGACAAGGATCACCACCCACACGGTCAGAGCAAAAGGGGCACTCGTGTaGAAGGAGGCAGTACAAATG +
Preference number: 4 (lower is better)
Translates to: WEQGLYILTRITTHTVRAKGALV*KEAVQM
Trigger: CATTTGTACTGCCTCCTTCCACACGAGTGCCCCTTT...TGCTCTGACCGTGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTTGCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp ACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCCGGATGGGGTGGGAGCAGATAATAATCTTCTTTaGCCAAAGGGGCACTCGTGT +
Preference number: 4 (lower is better)
Translates to: TTGLNSQGQAAIPDGVGADNNLL*PKGHSC
Trigger: ACACGAGTGCCCCTTTGGCCAAAGAAGATTATTATC...TGCTCCCACCCCATCCGGGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp GCCTGGGGGCCCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTTTCTTGATCTCTTTCTaGCTGGCATTTCGAGGCACT +
Preference number: 4 (lower is better)
Translates to: AWGPHAPSEDNLSGRTHSFLISF*LAFRGT
Trigger: AGTGCCTCGAAATGCCAGCCAGAAAGAGATCAAGAA...AGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGGGCCCCCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCCACATCTCCTACACGTaGAACGCATCACAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: PTLPVKTTCQEELILEPPHISYT*NASQKG
Trigger: GCCCTTTTGTGATGCGTTCCACGTGTAGGAGATGTG...GGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCACTGTGACCTTTCCGTaGAGAGAGGTGTTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SMPGLQQQDSIVRDRRPSTVTFP*REVLSH
Trigger: ATGGGACAACACCTCTCTCCACGGAAAGGTCACAGT...GGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTGGCCGTCACCTACCAATaGACAGGAAACTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: PVKTTCQEELILEPPGGLAVTYQ*TGNCHQ
Trigger: CTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGC...CAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp ACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCAAGGCAGCTGAAGTCTaGCCAGCACAGTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: TFPWREVLSHDFAVAKAVKAAEV*PAQCCN
Trigger: ATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTT...GACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAAGGCAGCTGAAGTCTaGCCAGCACAGTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: FPWREVLSHDFAVAKAVQKAAEV*PAQCCN
Trigger: ATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTT...CTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGTCAACAGTGTAAGTaGGAGAACCAAGCCCCTGAC +
Preference number: 4 (lower is better)
Translates to: WREVLSHDFAVAKAVQRLCQQCK*ENQAPD
Trigger: GTCAGGGGCTTGGTTCTCCCACTTACACTGTTGACA...GAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGGCTCTCACTGAATGGTaGGGAACCTTCAACTGCTTA +
Preference number: 4 (lower is better)
Translates to: PWREVLSHDFAVAKAVQRALTEW*GTFNCL
Trigger: TAAGCAGTTGAAGGTTCCCCACCATTCAGTGAGAGC...CCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp CTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGATAATAGGCTTTCTTaGTCTCTTTCTGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: LHPTARAVHCDLSVERGVDNRLS*SLSGWH
Trigger: ATGCCAGCCAGAAAGAGATCAAGAAAGCCTATTATC...AACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp CACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGCGATAATAGGCTTTCTTaGTCTCTTTCTGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: HLPMDRKLPPASGAASYCDNRLS*SLSGWH
Trigger: ATGCCAGCCAGAAAGAGATCAAGAAAGCCTATTATC...GCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp TCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCACCCCCTTTGCAGCTTaGTTGAATGTCAACTCCATG +
Preference number: 4 (lower is better)
Translates to: SMPGLQQQDSIVRDRRPSTPFAA*LNVNSM
Trigger: CATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGT...GGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp TCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCCCCCCAAGAAGAGCCTaGGCTATAGAAATAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SMPGLQQQDSIVRDRRPSPPRRA*AIEIKR
Trigger: CCTCTTTATTTCTATAGCTCAGGCTCTTCTTGGGGG...GGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGA
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp GATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTAATCACTTCGTAACTTaGTGCAGCTTAAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: DFAVAKAVQRLCGWELSANHFVT*CSLRLH
Trigger: ATGAAGCCTTAAGCTGCATCAAGTTACGAAGTGATT...AGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp GCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATGGCTTGTTGACCCCCTTTaGAGCTTGATTGAATGTCAA +
Preference number: 4 (lower is better)
Translates to: ATCYQQRLGNGGSALTEWLVDPL*SLIECQ
Trigger: TTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAG...CCATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp TGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGCTTGTTGACCCCCTTTaGAGCTTGATTGAATGTCAA +
Preference number: 4 (lower is better)
Translates to: CILLPGLSTVTFPWREVLLVDPL*SLIECQ
Trigger: TTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAG...CAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp ATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCTTGTTGACCCCCTTTaGAGCTTGATTGAATGTCAA +
Preference number: 4 (lower is better)
Translates to: ILLPGLSTVTFPWREVLSLVDPL*SLIECQ
Trigger: TTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAG...GGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTTGTTGACCCCCTTTaGAGCTTGATTGAATGTCAA +
Preference number: 4 (lower is better)
Translates to: PSPTNGQETATSLWGCILLVDPL*SLIECQ
Trigger: TTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAG...TAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTATCACTCGCTTTTTCTaGTTGGCTTGTCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LPVKTTCQEELILEPPGGITRFF*LACPAP
Trigger: GGGAGCAGGACAAGCCAAGCAGAAAAAGCGAGTGAT...ACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp GAAACTGTTGAGAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCGTCGGAGTGGATGTCTaGGCCGTCCCTCCGGAACAC +
Preference number: 4 (lower is better)
Translates to: ETVEKCSSLTCLTTARRSVGVDV*AVPPEH
Trigger: GTGTTCCGGAGGGACGGCGCAGACATCCACTCCGAC...GGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTCTCAACAGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp TTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTGAGCTAACCATCTCCCTCTaGCTGAGCCAGGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: FQIRVLALQESNHLPLPELTISL*LSQGPS
Trigger: TGACGGCCCCTGGCTCAGGCAGAGGGAGATGGTTAG...CTCAGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp GAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGCCAGCAACCAGCGTGTaGAGCACCGCGCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: EVFFINLSNDSPKILKHMPATSV*STAQPS
Trigger: AGATGGCTGCGCGGTGCTCCACACGCTGGTTGCTGG...CATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp GCCTGCAGAGCCGTAGGCATCGTACTGCTTCCTCTTCACCTCATCACTCAAAACAAAGGGGCACTCGTGTaGAAGGAGGCAGTACAAATG +
Preference number: 4 (lower is better)
Translates to: ACRAVGIVLLPLHLITQNKGALV*KEAVQM
Trigger: CATTTGTACTGCCTCCTTCCACACGAGTGCCCCTTT...GTTTTGAGTGATGAGGTGAAGAGGAAGCAGTACGATGCCTACGGCTCTGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CCA 90 bp TGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGCAGGGTGATACTTCTTaGCAAGCTGATAATAGGCTT +
Preference number: 4 (lower is better)
Translates to: CILLPGLSTVTFPWREVLQGDTS*QADNRL
Trigger: AAGCCTATTATCAGCTTGCCAAGAAGTATCACCCTG...CAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp ATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGACTTCTCCTTGGCTTTaGGATCATCCTTATTTGTGT +
Preference number: 4 (lower is better)
Translates to: ILLLPRPSRGSAGGSSVLTSPWL*DHPYLC
Trigger: ACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGT...CAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp AGAACCAAGCCCCTGACTAGCAACAGTGGCAGGGCTTCAGTTCCCAAGGCAGCTGGGAGAACTTCTCCTTaGCTTTGGGATCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: RTKPLTSNSGRASVPKAAGRTSP*LWDHPY
Trigger: ATAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCC...AGCTGCCTTGGGAACTGAAGCCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CAATTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTGGCAATGCTGCACCTTaGTGCCGGGCTCGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: QFQIRVLALQESNHLPLPGNAAP*CRARSP
Trigger: AGGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCC...AGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp TTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGCACATCTCCTACACGTaGAACGCATCACAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: FPWREVLSHDFAVAKAVQHISYT*NASQKG
Trigger: GCCCTTTTGTGATGCGTTCCACGTGTAGGAGATGTG...CTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp TTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTGAGGGCATCCTCACGGTCTaGCCATCCTCGACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FQIRVLALQESNHLPLPEGILTV*PSSTPA
Trigger: TGCAGGAGTCGAGGATGGCCAGACCGTGAGGATGCC...CTCAGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp CTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTGTCAACAGTGTAAGTaGGAGAACCAAGCCCCTGAC +
Preference number: 4 (lower is better)
Translates to: LPVKTTCQEELILEPPGGCQQCK*ENQAPD
Trigger: GTCAGGGGCTTGGTTCTCCCACTTACACTGTTGACA...ACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp ACGGTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAAAGATCTTCCTGCGCCAAAGATCTTCCTaGACAGCTCCTCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TVWKSPNEEDENSPKIFLRQRSS*TAPRGP
Trigger: TGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCG...CAGGAAGATCTTTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR TCA 90 bp CCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCTTGGAACTCGTATCTTaGTGTGGATGTAGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: PTLPVKTTCQEELILEPPLELVS*CGCSGL
Trigger: GAGACCACTACATCCACATCAAGATACGAGTTCCAA...GGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp GCCTGGGGGCCCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTAATCACTTCGTAACTTaGTGCAGCTTAAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: AWGPHAPSEDNLSGRTHSNHFVT*CSLRLH
Trigger: ATGAAGCCTTAAGCTGCATCAAGTTACGAAGTGATT...AGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGGGCCCCCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp GAAACTGTTGAGAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCGCCCCACGCTCCCAGTaGAGACAACCTGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ETVEKCSSLTCLTTARRSAPRSQ*RQPVRK
Trigger: CTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGGGC...GGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTCTCAACAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp GTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTGCTGAAGGACTGTACATCCTaGCAAGGATCACCACCCACA +
Preference number: 4 (lower is better)
Translates to: VKTTCQEELILEPPGGLLKDCTS*QGSPPT
Trigger: TGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTT...CAGCAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CCAAATGAAGAGGATGAGAACTCGCCAAAGATCTTCCTGAACAGCTCCTCGGGGAACCTCATAGGCTTCTaGCAGCTGGGAGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: PNEEDENSPKIFLNSSSGNLIGF*QLGELL
Trigger: GAGAAGTTCTCCCAGCTGGCAGAAGCCTATGAGGTT...CCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTTCTCATCCTCTTCATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR GCA 90 bp ACGGTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAAAGATCTTCCTGCCCAGGATCGAAGCCTaGAGAGCCGTAGGCATCGTA +
Preference number: 4 (lower is better)
Translates to: TVWKSPNEEDENSPKIFLPRIEA*RAVGIV
Trigger: TACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGG...CAGGAAGATCTTTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR GCA 90 bp TTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTGAGCGGGTGGGAGCTCAGTaGTGCTGTTCTGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: FQIRVLALQESNHLPLPERVGAQ*CCSGIL
Trigger: GAGGATTCCAGAACAGCAGCACTGAGCTCCCACCCG...CTCAGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CAATTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTCTAACCATCTCCCTCTaGCTGAGCCAGGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: QFQIRVLALQESNHLPLPLTISL*LSQGPS
Trigger: TGACGGCCCCTGGCTCAGGCAGAGGGAGATGGTTAG...AGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp TTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTGAGGGCAGGAGCCCTCCATaGCTGGCTTACAACAACAGG +
Preference number: 4 (lower is better)
Translates to: FQIRVLALQESNHLPLPEGRSPP*LAYNNR
Trigger: CCTGTTGTTGTAAGCCAGGCATGGAGGGCTCCTGCC...CTCAGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CAGGATCGAAGCCTGCAGAGCCGTAGGCATCGTACTGCTTCCTCTTCACCTCATTTCTTGATCTCTTTCTaGCTGGCATTTCGAGGCACT +
Preference number: 4 (lower is better)
Translates to: QDRSLQSRRHRTASSSPHFLISF*LAFRGT
Trigger: AGTGCCTCGAAATGCCAGCCAGAAAGAGATCAAGAA...ATGAGGTGAAGAGGAAGCAGTACGATGCCTACGGCTCTGCAGGCTTCGATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CCA 90 bp CTGCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATCAGGGTGATACTTCTTaGCAAGCTGATAATAGGCTT +
Preference number: 4 (lower is better)
Translates to: LRHATSRGWGMGVLLSLNQGDTS*QADNRL
Trigger: AAGCCTATTATCAGCTTGCCAAGAAGTATCACCCTG...ATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp ACATCTCCTACACGTGGAACGCATCACAAAAGGGCCTGTGTTGATGGTTTCCATCTCGCTTTTTCTGCTTaGCTTGTCCTGCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: TSPTRGTHHKRACVDGFHLAFSA*LVLLPC
Trigger: GCAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAG...ATGGAAACCATCAACACAGGCCCTTTTGTGATGCGTTCCACGTGTAGGAGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR CCA 90 bp CCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTGACTGTGACCTTTCCGTaGAGAGAGGTGTTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: PVKTTCQEELILEPPGGLTVTFP*REVLSH
Trigger: ATGGGACAACACCTCTCTCCACGGAAAGGTCACAGT...CAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTTCGTAACTTGATGCAGCTTAAGGCTTCATTTCTAAGCTGTAAGCATGGCCTTACTGCCACCAGCCTCTaGGGCTGCATCCTACTGCCC +
Preference number: 4 (lower is better)
Translates to: LRNLMQLKASFLSCKHGLTATSL*GCILLP
Trigger: GGGCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGT...AAGGCCATGCTTACAGCTTAGAAATGAAGCCTTAAGCTGCATCAAGTTACGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp GAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGGCTACCAGCAGAGGCTaGGGAATGGGGGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: EVFFINLSNDSPKILKHMATSRG*GMGVLL
Trigger: GAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGC...CATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp GAAGCCTGCAGAGCCGTAGGCATCGTACTGCTTCCTCTTCACCTCATCACTCAACAGGGTGATACTTCTTaGCAAGCTGTAAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: EACRAVGIVLLPLHLITQQGDTS*QAVRLT
Trigger: TGTCAGCCTTACAGCTTGCCAAGAAGTATCACCCTG...TTGAGTGATGAGGTGAAGAGGAAGCAGTACGATGCCTACGGCTCTGCAGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570857.5
ENST00000631547.1
CDS-3UTR TCA 90 bp TCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCGATAATAGGCTTTCTTaGTCTCTTTCTGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SMPGLQQQDSIVRDRRPSDNRLS*SLSGWH
Trigger: ATGCCAGCCAGAAAGAGATCAAGAAAGCCTATTATC...GGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp GTTGCAGCGCTCACACGTGTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCGATAATAGGCTTTCTTaGTCTCTTTCTGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: VAALTRVHDVHGELLVDPDNRLS*SLSGWH
Trigger: ATGCCAGCCAGAAAGAGATCAAGAAAGCCTATTATC...GGGGTCAACAAGGAGTTCACCGTGAACATCATGGACACGTGTGAGCGCTGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR TCA 90 bp CTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTGGAACTCGTATCTTaGTGTGGATGTAGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LPVKTTCQEELILEPPGGLELVS*CGCSGL
Trigger: GAGACCACTACATCCACATCAAGATACGAGTTCCAA...ACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp ACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCTTGGAACTCGTATCTTaGTGTGGATGTAGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: TFPWREVLSHDFAVAKAVLELVS*CGCSGL
Trigger: GAGACCACTACATCCACATCAAGATACGAGTTCCAA...GACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp CGCTCACACGTGTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTGCATTGGAACTCGTATCTTaGTGTGGATGTAGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: RSHVSMMFTVNSLLTPFALELVS*CGCSGL
Trigger: GAGACCACTACATCCACATCAAGATACGAGTTCCAA...TGCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATGGACACGTGTGAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR GCA 90 bp CCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCCTTGTTGACCCCCTTTaGAGCTTGATTGAATGTCAA +
Preference number: 4 (lower is better)
Translates to: PTLPVKTTCQEELILEPPLVDPL*SLIECQ
Trigger: TTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAG...GGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp GAAACTGTTGAGAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCCTTGTCCTGCTCCCCTaGAGACCACACAGGGCGATA +
Preference number: 4 (lower is better)
Translates to: ETVEKCSSLTCLTTARRSLVLLP*RPHRAI
Trigger: TATCGCCCTGTGTGGTCTGCAGGGGAGCAGGACAAG...GGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTCTCAACAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp TTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTGAGAGGATCAGGCTCTGCTaGCGGCTCGTTAGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: FQIRVLALQESNHLPLPERIRLC*RLVSLF
Trigger: AAAGAGGCTAACGAGCCGGCAGCAGAGCCTGATCCT...CTCAGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp GAAACTGTTGAGAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCCGGGTGGGAGCTCAGTaGTGCTGTTCTGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: ETVEKCSSLTCLTTARRSRVGAQ*CCSGIL
Trigger: GAGGATTCCAGAACAGCAGCACTGAGCTCCCACCCG...GGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTCTCAACAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp GAAACTGTTGAGAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCCAATGGACAGGAAACTaGCACCAGCCTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ETVEKCSSLTCLTTARRSQWTGN*HQPLGL
Trigger: CAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTG...GGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTCTCAACAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR GCA 90 bp CTTCGTAACTTGATGCAGCTTAAGGCTTCATTTCTAAGCTGTAAGCATGGCCTTCTAACCATCTCCCTCTaGCTGAGCCAGGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: LRNLMQLKASFLSCKHGLLTISL*LSQGPS
Trigger: TGACGGCCCCTGGCTCAGGCAGAGGGAGATGGTTAG...AAGGCCATGCTTACAGCTTAGAAATGAAGCCTTAAGCTGCATCAAGTTACGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp TCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCCAGGGTGATACTTCTTaGCAAGCTGATAATAGGCTT +
Preference number: 4 (lower is better)
Translates to: SMPGLQQQDSIVRDRRPSQGDTS*QADNRL
Trigger: AAGCCTATTATCAGCTTGCCAAGAAGTATCACCCTG...GGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCACTTCTCCTTGGCTTTaGGATCATCCTTATTTGTGT +
Preference number: 4 (lower is better)
Translates to: RGERCCPMILLLPRPSRGTSPWL*DHPYLC
Trigger: ACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGT...GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CCCTCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCAACTTCTCCTTGGCTTTaGGATCATCCTTATTTGTGT +
Preference number: 4 (lower is better)
Translates to: PSMPGLQQQDSIVRDRRPTSPWL*DHPYLC
Trigger: ACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGT...TGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTGAGCTCGCTTTTTCTGCTTaGCTTGTCCTGCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: FQIRVLALQESNHLPLPELAFSA*LVLLPC
Trigger: GCAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAG...CTCAGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp TTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGGAAACTGCGTCAGTGCTGCTGTTCTaGAATCCTCCCGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: FINLSNDSPKILKHMETASVLLF*NPPVSQ
Trigger: CTGGGAGACGGGAGGATTCCAGAACAGCAGCACTGA...CGCAGTTTCCATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TCTGCTCTCACTGAATGGTGGGGAACCTTCAACTGCTTAGCCTGTGCTTTCCTTAGGAAGAACTCATTCTaGAACCTCCCGGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: SALTEWWGTFNCLACAFLRKNSF*NLPEVC
Trigger: GCAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCT...AAGGAAAGCACAGGCTAAGCAGTTGAAGGTTCCCCACCATTCAGTGAGAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CAATTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTCCATCCCGGATGGGGTaGGAGCAAGGACTGTACATC +
Preference number: 4 (lower is better)
Translates to: QFQIRVLALQESNHLPLPPSRMG*EQGLYI
Trigger: GATGTACAGTCCTTGCTCCCACCCCATCCGGGATGG...AGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp CAATTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTCAAAAGGGCCTGTGTTaGTGGTTTCCATGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: QFQIRVLALQESNHLPLPQKGLC*WFPCRS
Trigger: GCTCCGGCATGGAAACCATCAACACAGGCCCTTTTG...AGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CGCTCACACGTGTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTGCACTTGTTGACCCCCTTTaGAGCTTGATTGAATGTCAA +
Preference number: 4 (lower is better)
Translates to: RSHVSMMFTVNSLLTPFALVDPL*SLIECQ
Trigger: TTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAG...TGCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATGGACACGTGTGAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000575106.5
ENST00000576911.5
ENST00000615114.2
ENST00000633082.1
CDS-3UTR GCA 90 bp CTTCGTAACTTGATGCAGCTTAAGGCTTCATTTCTAAGCTGTAAGCATGGCCTTCTTGTCCTGCTCCCCTaGAGACCACACAGGGCGATA +
Preference number: 4 (lower is better)
Translates to: LRNLMQLKASFLSCKHGLLVLLP*RPHRAI
Trigger: TATCGCCCTGTGTGGTCTGCAGGGGAGCAGGACAAG...AAGGCCATGCTTACAGCTTAGAAATGAAGCCTTAAGCTGCATCAAGTTACGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CTTCGTAACTTGATGCAGCTTAAGGCTTCATTTCTAAGCTGTAAGCATGGCCTTCTGCTTGGCTTGTCCTaGTCCCCTGCAGACCACACA +
Preference number: 4 (lower is better)
Translates to: LRNLMQLKASFLSCKHGLLLGLS*SPADHT
Trigger: TGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAG...AAGGCCATGCTTACAGCTTAGAAATGAAGCCTTAAGCTGCATCAAGTTACGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp GTTCACGGTGAACTCCTTGTTGACCCCCTTTGCAGCTTGATTGAATGTCAACTCAAAGGGGCACTCGTGTaGAAGGAGGCAGTACAAATG +
Preference number: 4 (lower is better)
Translates to: VHGELLVDPLCSLIECQLKGALV*KEAVQM
Trigger: CATTTGTACTGCCTCCTTCCACACGAGTGCCCCTTT...GAGTTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CCA 90 bp CTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTCAGGGTGATACTTCTTaGCAAGCTGATAATAGGCTT +
Preference number: 4 (lower is better)
Translates to: LPVKTTCQEELILEPPGGQGDTS*QADNRL
Trigger: AAGCCTATTATCAGCTTGCCAAGAAGTATCACCCTG...ACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp GAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGCTCGCTTTTTCTGCTTaGCTTGTCCTGCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: EVFFINLSNDSPKILKHMLAFSA*LVLLPC
Trigger: GCAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAG...CATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTGAACGTAATGAAAATTTCCCTTTTTCCCACAGGCATCCTCACGGTCTGGCCAACTGTGACCTTTCCGTaGAGAGAGGTGTTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: LNVMKISLFPTGILTVWPTVTFP*REVLSH
Trigger: ATGGGACAACACCTCTCTCCACGGAAAGGTCACAGT...TGGCCAGACCGTGAGGATGCCTGTGGGAAAAAGGGAAATTTTCATTACGTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR CCA 90 bp TTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGGAAACTGCGAAGGCAGCTGAAGTCTaGCCAGCACAGTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: FINLSNDSPKILKHMETAKAAEV*PAQCCN
Trigger: ATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTT...CGCAGTTTCCATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TCTGCTCTCACTGAATGGTGGGGAACCTTCAACTGCTTAGCCTGTGCTTTCCTTGCTCTCACTGAATGGTaGGGAACCTTCAACTGCTTA +
Preference number: 4 (lower is better)
Translates to: SALTEWWGTFNCLACAFLALTEW*GTFNCL
Trigger: TAAGCAGTTGAAGGTTCCCCACCATTCAGTGAGAGC...AAGGAAAGCACAGGCTAAGCAGTTGAAGGTTCCCCACCATTCAGTGAGAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp ACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCAATCACTTCGTAACTTaGTGCAGCTTAAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: TFPWREVLSHDFAVAKAVNHFVT*CSLRLH
Trigger: ATGAAGCCTTAAGCTGCATCAAGTTACGAAGTGATT...GACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR GCA 90 bp CTTCGTAACTTGATGCAGCTTAAGGCTTCATTTCTAAGCTGTAAGCATGGCCTTATGGAAACTGCGACATaGTACCAGCAGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LRNLMQLKASFLSCKHGLMETAT*YQQRLG
Trigger: CCCCAGCCTCTGCTGGTAGCATGTCGCAGTTTCCAT...AAGGCCATGCTTACAGCTTAGAAATGAAGCCTTAAGCTGCATCAAGTTACGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TCTGCTCTCACTGAATGGTGGGGAACCTTCAACTGCTTAGCCTGTGCTTTCCTTGGGAGAACTTCTCCTTaGCTTTGGGATCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: SALTEWWGTFNCLACAFLGRTSP*LWDHPY
Trigger: ATAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCC...AAGGAAAGCACAGGCTAAGCAGTTGAAGGTTCCCCACCATTCAGTGAGAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp AATATTCAATTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTACTGCCACCAGCCTCTaGGGCTGCATCCTACTGCCC +
Preference number: 4 (lower is better)
Translates to: NIQFQIRVLALQESNHLPTATSL*GCILLP
Trigger: GGGCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGT...AGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAATTGAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp CTTCGTAACTTGATGCAGCTTAAGGCTTCATTTCTAAGCTGTAAGCATGGCCTTGCCGTCACCTACCAATaGACAGGAAACTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: LRNLMQLKASFLSCKHGLAVTYQ*TGNCHQ
Trigger: CTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGC...AAGGCCATGCTTACAGCTTAGAAATGAAGCCTTAAGCTGCATCAAGTTACGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp TTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGGAAACTGCGAGGAAGAACTCATTCTaGAACCTCCCGGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: FINLSNDSPKILKHMETARKNSF*NLPEVC
Trigger: GCAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCT...CGCAGTTTCCATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTTCGTAACTTGATGCAGCTTAAGGCTTCATTTCTAAGCTGTAAGCATGGCCTTAGCACAGTGCTGCAATaGGCTGTGGCTCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LRNLMQLKASFLSCKHGLSTVLQ*AVAQQK
Trigger: CTTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCT...AAGGCCATGCTTACAGCTTAGAAATGAAGCCTTAAGCTGCATCAAGTTACGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp CATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTGCAGCTTGATTGAATGTACCCCCTTTGCAGCTTaGTTGAATGTCAACTCCATG +
Preference number: 4 (lower is better)
Translates to: HDVHGELLVDPLCSLIECTPFAA*LNVNSM
Trigger: CATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGT...ACATTCAATCAAGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR GCA 90 bp GAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGAACCTCATAGGCTTCTaGCAGCTGGGAGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: EVFFINLSNDSPKILKHMNLIGF*QLGELL
Trigger: GAGAAGTTCTCCCAGCTGGCAGAAGCCTATGAGGTT...CATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp GAAACTGTTGAGAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCAAAGGGGCACTCGTGTaGAAGGAGGCAGTACAAATG +
Preference number: 4 (lower is better)
Translates to: ETVEKCSSLTCLTTARRSKGALV*KEAVQM
Trigger: CATTTGTACTGCCTCCTTCCACACGAGTGCCCCTTT...GGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTCTCAACAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp GAGGCTGATCAAACACGGTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCTTCTTGATCTCTTTCTaGCTGGCATTTCGAGGCACT +
Preference number: 4 (lower is better)
Translates to: EADQTRSGNLQMKRMRTRFLISF*LAFRGT
Trigger: AGTGCCTCGAAATGCCAGCCAGAAAGAGATCAAGAA...GCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGACCGTGTTTGATCAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CCA 90 bp GAGGCTGATCAAACACGGTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCGGGAGAACTTCTCCTTaGCTTTGGGATCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: EADQTRSGNLQMKRMRTRGRTSP*LWDHPY
Trigger: ATAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCC...GCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGACCGTGTTTGATCAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CCA 90 bp GAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGCACATCTCCTACACGTaGAACGCATCACAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: EVFFINLSNDSPKILKHMHISYT*NASQKG
Trigger: GCCCTTTTGTGATGCGTTCCACGTGTAGGAGATGTG...CATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp GAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGGACTGTGCAGCTGCTTaGTACCCCGGGAATAAAAAC +
Preference number: 4 (lower is better)
Translates to: EVFFINLSNDSPKILKHMDCAAA*YPGNKN
Trigger: GTTTTTATTCCCGGGGTACCAAGCAGCTGCACAGTC...CATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp TTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTGAGGCTCTCACTGAATGGTaGGGAACCTTCAACTGCTTA +
Preference number: 4 (lower is better)
Translates to: FQIRVLALQESNHLPLPEALTEW*GTFNCL
Trigger: TAAGCAGTTGAAGGTTCCCCACCATTCAGTGAGAGC...CTCAGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
3UTR CAA 72 bp GTTCACGGTGAACTCCTTGTTGACCCCCTTTGCAGCTaGATTGAATGTCAACTCCATGAAGTATTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VHGELLVDPLCS*IECQLHEVFLR
Trigger: CCTCAGGAATACTTCATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR TCA 90 bp GAAACTGTTGAGAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCACCCCCTTTGCAGCTTaGTTGAATGTCAACTCCATG +
Preference number: 4 (lower is better)
Translates to: ETVEKCSSLTCLTTARRSTPFAA*LNVNSM
Trigger: CATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGT...GGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTCTCAACAGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp GATCAAACACGGTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAAAGAACCCCCTTTGCAGCTTaGTTGAATGTCAACTCCATG +
Preference number: 4 (lower is better)
Translates to: DQTRSGNLQMKRMRTRQRTPFAA*LNVNSM
Trigger: CATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGT...TCTTTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGACCGTGTTTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR TCA 90 bp CAATTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTCCCCCAAGAAGAGCCTaGGCTATAGAAATAAAGAGG +
Preference number: 4 (lower is better)
Translates to: QFQIRVLALQESNHLPLPPPRRA*AIEIKR
Trigger: CCTCTTTATTTCTATAGCTCAGGCTCTTCTTGGGGG...AGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR TCA 90 bp GAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGCCCCCAAGAAGAGCCTaGGCTATAGAAATAAAGAGG +
Preference number: 4 (lower is better)
Translates to: EVFFINLSNDSPKILKHMPPRRA*AIEIKR
Trigger: CCTCTTTATTTCTATAGCTCAGGCTCTTCTTGGGGG...CATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp TTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTGAGGGAATAAAAACTAACTaGGCAGAGCAGCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: FQIRVLALQESNHLPLPEGIKTN*AEQLMP
Trigger: AGGCATCAGCTGCTCTGCTCAGTTAGTTTTTATTCC...CTCAGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp GCTGATCAAACACGGTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAATTATTTGTGTCAGGGTaGTACTTCTTGGCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: ADQTRSGNLQMKRMRTRQLFVSG*YFLASC
Trigger: ACAGCTTGCCAAGAAGTATCACCCTGACACAAATAA...TTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGACCGTGTTTGATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570857.5
ENST00000631547.1
CDS-3UTR TCA 90 bp ACGGTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAAAGATCTTCCTGTTATTTGTGTCAGGGTaGTACTTCTTGGCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: TVWKSPNEEDENSPKIFLLFVSG*YFLASC
Trigger: ACAGCTTGCCAAGAAGTATCACCCTGACACAAATAA...CAGGAAGATCTTTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570857.5
ENST00000631547.1
CDS-3UTR CCA 90 bp TTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTGAGGATAATAATCTTCTTTaGCCAAAGGGGCACTCGTGT +
Preference number: 4 (lower is better)
Translates to: FQIRVLALQESNHLPLPEDNNLL*PKGHSC
Trigger: ACACGAGTGCCCCTTTGGCCAAAGAAGATTATTATC...CTCAGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp CTCCTTGGCTTTGGGATCATCCTTATTTGTGTCAGGGTGATACTTCTTGGCAAGGATAATAATCTTCTTTaGCCAAAGGGGCACTCGTGT +
Preference number: 4 (lower is better)
Translates to: LLGFGIILICVRVILLGKDNNLL*PKGHSC
Trigger: ACACGAGTGCCCCTTTGGCCAAAGAAGATTATTATC...CTTGCCAAGAAGTATCACCCTGACACAAATAAGGATGATCCCAAAGCCAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CCA 90 bp ACGGTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAAAGATCTTCCTGCAGGGTGATACTTCTTaGCAAGCTGATAATAGGCTT +
Preference number: 4 (lower is better)
Translates to: TVWKSPNEEDENSPKIFLQGDTS*QADNRL
Trigger: AAGCCTATTATCAGCTTGCCAAGAAGTATCACCCTG...CAGGAAGATCTTTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CCA 90 bp AATATTCAATTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTATAAAGAGGTCGGAGTaGATGTCTGCGCCGTCCCTC +
Preference number: 4 (lower is better)
Translates to: NIQFQIRVLALQESNHLPIKRSE*MSAPSL
Trigger: GAGGGACGGCGCAGACATCCACTCCGACCTCTTTAT...AGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAATTGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp AATATTCAATTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTTCAGTGCTGCTGTTCTaGAATCCTCCCGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: NIQFQIRVLALQESNHLPSVLLF*NPPVSQ
Trigger: CTGGGAGACGGGAGGATTCCAGAACAGCAGCACTGA...AGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAATTGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp AATATTCAATTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTGGAGCCCTCCATGCCTaGCTTACAACAACAGGACTC +
Preference number: 4 (lower is better)
Translates to: NIQFQIRVLALQESNHLPGALHA*LTTTGL
Trigger: GAGTCCTGTTGTTGTAAGCCAGGCATGGAGGGCTCC...AGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAATTGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CCA 90 bp GCTGATCAAACACGGTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAAACTTCTCCTTGGCTTTaGGATCATCCTTATTTGTGT +
Preference number: 4 (lower is better)
Translates to: ADQTRSGNLQMKRMRTRQTSPWL*DHPYLC
Trigger: ACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGT...TTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGACCGTGTTTGATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CCA 90 bp CCTTGGCTTTGGGATCATCCTTATTTGTGTCAGGGTGATACTTCTTGGCAAGCTACTTCTCCTTGGCTTTaGGATCATCCTTATTTGTGT +
Preference number: 4 (lower is better)
Translates to: PWLWDHPYLCQGDTSWQATSPWL*DHPYLC
Trigger: ACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGT...AGCTTGCCAAGAAGTATCACCCTGACACAAATAAGGATGATCCCAAAGCCAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CCA 90 bp CTCCTTGGCTTTGGGATCATCCTTATTTGTGTCAGGGTGATACTTCTTGGCAAGACTTCTCCTTGGCTTTaGGATCATCCTTATTTGTGT +
Preference number: 4 (lower is better)
Translates to: LLGFGIILICVRVILLGKTSPWL*DHPYLC
Trigger: ACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGT...CTTGCCAAGAAGTATCACCCTGACACAAATAAGGATGATCCCAAAGCCAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CCA 90 bp CTTCGTAACTTGATGCAGCTTAAGGCTTCATTTCTAAGCTGTAAGCATGGCCTTGATAATAATCTTCTTTaGCCAAAGGGGCACTCGTGT +
Preference number: 4 (lower is better)
Translates to: LRNLMQLKASFLSCKHGLDNNLL*PKGHSC
Trigger: ACACGAGTGCCCCTTTGGCCAAAGAAGATTATTATC...AAGGCCATGCTTACAGCTTAGAAATGAAGCCTTAAGCTGCATCAAGTTACGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR TCA 90 bp CTTCGTAACTTGATGCAGCTTAAGGCTTCATTTCTAAGCTGTAAGCATGGCCTTAATCACTTCGTAACTTaGTGCAGCTTAAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: LRNLMQLKASFLSCKHGLNHFVT*CSLRLH
Trigger: ATGAAGCCTTAAGCTGCATCAAGTTACGAAGTGATT...AAGGCCATGCTTACAGCTTAGAAATGAAGCCTTAAGCTGCATCAAGTTACGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CCA 90 bp AATATTCAATTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTGGGAGAACTTCTCCTTaGCTTTGGGATCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: NIQFQIRVLALQESNHLPGRTSP*LWDHPY
Trigger: ATAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCC...AGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAATTGAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS GCA 90 bp GGCCGCAAGAGGTCAGGGAAGACGCAAAGGCGGGGACGCTCAGCTTaGGGCTCAGCCATGCCCCCACCACGCCCTCCCTGGGCGGCCGGG +
Preference number: 5 (lower is better)
Translates to: GRKRSGKTQRRGRSA*GSAMPPPRPPWAAG
Trigger: CCCGGCCGCCCAGGGAGGGCGTGGTGGGGGCATGGCTGAGCCGCAAGCTGAGCGTCCCCGCCTTTGCGTCTTCCCTGACCTCTTGCGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000570857.5
ENST00000572974.1
ENST00000574895.1
ENST00000575106.5
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
ENST00000631547.1
ENST00000632858.1
ENST00000633082.1
ENST00000633931.1
CDS-3UTR CAA 90 bp CTGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGCACCGCGCAGCCATCTaGGCCCGGGGACTCTGCGCC +
Preference number: 5 (lower is better)
Translates to: LGLYVPPRHRLCSCLVPRHRAAI*ARGLCA
Trigger: GGCGCAGAGTCCCCGGGCCAAGATGGCTGCGCGGTG...CCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp GTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTTCTGGCGGGGACGCTCAGCTaGCGGCTCAGCCATGCCCCC +
Preference number: 5 (lower is better)
Translates to: VAKAVQRLCGWELSAAVLAGTLS*RLSHAP
Trigger: GGGGGCATGGCTGAGCCGCAAGCTGAGCGTCCCCGC...CAGAACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp TGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGCCGGGCTCGTTCCCCTaGCCGTTGCAGCGCTCACAC +
Preference number: 5 (lower is better)
Translates to: WASTCLPGTDCAAAWYPGPGSFP*PLQRSH
Trigger: GTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGG...CCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp TTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGCACCGCGCAGCCATCTaGGCCCGGGGACTCTGCGCC +
Preference number: 5 (lower is better)
Translates to: LLLPRPSRGSAGGSSVLLHRAAI*ARGLCA
Trigger: GGCGCAGAGTCCCCGGGCCAAGATGGCTGCGCGGTG...CAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp GATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCGGGGACGCTCAGCTaGCGGCTCAGCCATGCCCCC +
Preference number: 5 (lower is better)
Translates to: DFAVAKAVQRLCGWELSAAGTLS*RLSHAP
Trigger: GGGGGCATGGCTGAGCCGCAAGCTGAGCGTCCCCGC...AGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp GCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATGGGCGGGGACGCTCAGCTaGCGGCTCAGCCATGCCCCC +
Preference number: 5 (lower is better)
Translates to: ATCYQQRLGNGGSALTEWAGTLS*RLSHAP
Trigger: GGGGGCATGGCTGAGCCGCAAGCTGAGCGTCCCCGC...CCATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp AGAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGTCGTTCCCCTTGCCGTaGCAGCGCTCACACGTGTCC +
Preference number: 5 (lower is better)
Translates to: RAADASAGPLIRGGRCWWSFPLP*QRSHVS
Trigger: GGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGA...CCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp CTGAGCCAGGGGCCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGCCGGGCTCGTTCCCCTaGCCGTTGCAGCGCTCACAC +
Preference number: 5 (lower is better)
Translates to: LSQGPSPTNGQETATSLWPGSFP*PLQRSH
Trigger: GTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGG...CCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGCCCCTGGCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp TTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTGGCAATGCTGCACCTaGGTGCCGGGCTCGTTCCCC +
Preference number: 5 (lower is better)
Translates to: LLLPRPSRGSAGGSSVLLWQCCT*VPGSFP
Trigger: GGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCCA...CAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp GGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGATCGCCTCACGCCTAGCCTaGCTTCCTGCGGAGCTATCC +
Preference number: 5 (lower is better)
Translates to: GALALGGAAASRPSFQWIASRLA*LPAELS
Trigger: GGATAGCTCCGCAGGAAGCAAGGCTAGGCGTGAGGC...GATCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS CCA 90 bp GCCTTACCATGCCGGAGCCGCCACAGTAGTGGCAATGCTGCACCTTaGTGCCGGGCTCGTTCCCCTTGCCGTTGCAGCGCTCACACGTGT +
Preference number: 5 (lower is better)
Translates to: ALPCRSRHSSGNAAP*CRARSPCRCSAHTC
Trigger: ACACGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCCACTACTGTGGCGGCTCCGGCATGGTAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CCA 90 bp GGAGCAGTGCCACAACCAGCTCTTCTCAGTCAGTGGTGCAAGCCGTaGGAGGTGGAGTCTCGGGCAGAGCCTTACCATGCCGGAGCCGCC +
Preference number: 5 (lower is better)
Translates to: GAVPQPALLSQWCKP*EVESRAEPYHAGAA
Trigger: GGCGGCTCCGGCATGGTAAGGCTCTGCCCGAGACTCCACCTCCCACGGCTTGCACCACTGACTGAGAAGAGCTGGTTGTGGCACTGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS-3UTR CAA 90 bp CACCAGCCTCTGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCTCGTTCCCCTTGCCGTaGCAGCGCTCACACGTGTCC +
Preference number: 5 (lower is better)
Translates to: HQPLGLHPTARAVHCDLSSFPLP*QRSHVS
Trigger: GGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGA...GGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp ATGCTGGGAGCCGCTGGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGCATCGTATCGTTCCCCTTGCCGTaGCAGCGCTCACACGTGTCC +
Preference number: 5 (lower is better)
Translates to: MLGAAGPRIEACRAVGIVSFPLP*QRSHVS
Trigger: GGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGA...TACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CAA 90 bp TCCAGTAGCTATGCTGGGAGCCGCTGGCCCCAGGATCGAAGCCTGCAGAGCCGTTCGTTCCCCTTGCCGTaGCAGCGCTCACACGTGTCC +
Preference number: 5 (lower is better)
Translates to: SSSYAGSRWPQDRSLQSRSFPLP*QRSHVS
Trigger: GGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGA...ACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCATAGCTACTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS GCA 90 bp TTACCATGCCGGAGCCGCCACAGTAGTGGCAATGCTGCACCTTGGTaGCGGGCTCGTTCCCCTTGCCGTTGCAGCGCTCACACGTGTCCA +
Preference number: 5 (lower is better)
Translates to: LPCRSRHSSGNAAPW*RARSPCRCSAHTCP
Trigger: TGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCCACTACTGTGGCGGCTCCGGCATGGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS-3UTR CAA 90 bp TGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGTCGTTCCCCTTGCCGTaGCAGCGCTCACACGTGTCC +
Preference number: 5 (lower is better)
Translates to: WGCILLPGLSTVTFPWRESFPLP*QRSHVS
Trigger: GGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGA...CTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp GCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATGGCCGGGCTCGTTCCCCTaGCCGTTGCAGCGCTCACAC +
Preference number: 5 (lower is better)
Translates to: ATCYQQRLGNGGSALTEWPGSFP*PLQRSH
Trigger: GTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGG...CCATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp CTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGATCTTTTTCCCGGGCTCGTTCCCCTaGCCGTTGCAGCGCTCACAC +
Preference number: 5 (lower is better)
Translates to: LALGGAAASRPSFQWIFFPGSFP*PLQRSH
Trigger: GTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGG...GAAAAAGATCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000576911.5
ENST00000612103.4
ENST00000615114.2
CDS-3UTR CAA 90 bp CTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTCCGGGCTCGTTCCCCTaGCCGTTGCAGCGCTCACAC +
Preference number: 5 (lower is better)
Translates to: LHPTARAVHCDLSVERGVPGSFP*PLQRSH
Trigger: GTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGG...AACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp GGGCTCGTTCCCCTTGCCGTTGCAGCGCTCACACGTGTCCATGATGTTCACGGTTGGCAATGCTGCACCTaGGTGCCGGGCTCGTTCCCC +
Preference number: 5 (lower is better)
Translates to: GLVPLAVAALTRVHDVHGWQCCT*VPGSFP
Trigger: GGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCCA...ACCGTGAACATCATGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR CAA 90 bp CCCAAGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCGCCTCACGCCTAGCCTaGCTTCCTGCGGAGCTATCC +
Preference number: 5 (lower is better)
Translates to: PKAAEVWPAQCCNGLWLSASRLA*LPAELS
Trigger: GGATAGCTCCGCAGGAAGCAAGGCTAGGCGTGAGGC...GCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR CAA 90 bp GGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGAACCCATGATTTTGCTGTaGCCAAGGCCGTCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: GLYVPPRHRLCSCLVPREPMILL*PRPSRG
Trigger: GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGG...TTCCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp TCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCATCCCACCGCGCAGCCATCTaGGCCCGGGGACTCTGCGCC +
Preference number: 5 (lower is better)
Translates to: SMPGLQQQDSIVRDRRPSHRAAI*ARGLCA
Trigger: GGCGCAGAGTCCCCGGGCCAAGATGGCTGCGCGGTG...GGATGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATTGGCAATGCTGCACCTaGGTGCCGGGCTCGTTCCCC +
Preference number: 5 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDWQCCT*VPGSFP
Trigger: GGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCCA...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp AGAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGACTCGCTTTTTCTGCTaGGCTTGTCCTGCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: RAADASAGPLIRGGRCWWTRFFC*ACPAPL
Trigger: CAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAGT...CCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS CCA 90 bp AGAGGTGGGGGACAGGTGCTGGCAGCACACAGGCAGCCATCACTGTaGCAAAAGGGATATGCACCGCCCGAGTCTTCTGCTCTTGGAGCC +
Preference number: 5 (lower is better)
Translates to: RGGGQVLAAHRQPSL*QKGYAPPESSALGA
Trigger: GGCTCCAAGAGCAGAAGACTCGGGCGGTGCATATCCCTTTTGCCACAGTGATGGCTGCCTGTGTGCTGCCAGCACCTGTCCCCCACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CCA 90 bp GAAAAGCCAATACAGGGTGCGTGGCTGAGGTCGCTCCCTGGCCCTTaGAACCACAGGACCCTGGAGAAGCCAGGGAATAGCCCCCAGATG +
Preference number: 5 (lower is better)
Translates to: EKPIQGAWLRSLPGP*NHRTLEKPGNSPQM
Trigger: CATCTGGGGGCTATTCCCTGGCTTCTCCAGGGTCCTGTGGTTCCAAGGGCCAGGGAGCGACCTCAGCCACGCACCCTGTATTGGCTTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CCA 90 bp AAGCTTTGGAAAGAACTCACAGGCAGCCAGCACCCTCGCAGCACATaGGAAGAGAGGGACCCAACCTTGGCAGGGGCGGACACCCTGAGC +
Preference number: 5 (lower is better)
Translates to: KLWKELTGSQHPRST*EERDPTLAGADTLS
Trigger: GCTCAGGGTGTCCGCCCCTGCCAAGGTTGGGTCCCTCTCTTCCCATGTGCTGCGAGGGTGCTGGCTGCCTGTGAGTTCTTTCCAAAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576180.1
ENST00000632730.1
CDS CCA 90 bp GTGGACCGAGCAGAGTCAGCAGCCAAGGCTTCCGCCGGGAAGCTTTaGAAAGAACTCACAGGCAGCCAGCACCCTCGCAGCACATGGGAA +
Preference number: 5 (lower is better)
Translates to: VDRAESAAKASAGKL*KELTGSQHPRSTWE
Trigger: TTCCCATGTGCTGCGAGGGTGCTGGCTGCCTGTGAGTTCTTTCCAAAGCTTCCCGGCGGAAGCCTTGGCTGCTGACTCTGCTCGGTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576180.1
ENST00000632730.1
CDS-3UTR CAA 90 bp CCAAATGAAGAGGATGAGAACTCGCCAAAGATCTTCCTGAACAGCTCCTCGGGGGCGGGGACGCTCAGCTaGCGGCTCAGCCATGCCCCC +
Preference number: 5 (lower is better)
Translates to: PNEEDENSPKIFLNSSSGAGTLS*RLSHAP
Trigger: GGGGGCATGGCTGAGCCGCAAGCTGAGCGTCCCCGC...CCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTTCTCATCCTCTTCATTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CAA 90 bp ACACGTGTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTGCAGCTTGGCGGGGACGCTCAGCTaGCGGCTCAGCCATGCCCCC +
Preference number: 5 (lower is better)
Translates to: TRVHDVHGELLVDPLCSLAGTLS*RLSHAP
Trigger: GGGGGCATGGCTGAGCCGCAAGCTGAGCGTCCCCGC...CAAGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATGGACACGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000575106.5
ENST00000576911.5
ENST00000615114.2
ENST00000633082.1
CDS-3UTR CAA 90 bp AGAGCAGCTGATGCCTCGGCAGGGCCCCTCATTAGGGGAGGACGGTGCTGGTGGTTCACGGTGAACTCCTaGTTGACCCCCTTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: RAADASAGPLIRGGRCWWFTVNS*LTPFAA
Trigger: AGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAA...CCACCAGCACCGTCCTCCCCTAATGAGGGGCCCTGCCGAGGCATCAGCTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp GGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGAATTCACGGTGAACTCCTaGTTGACCCCCTTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: GLYVPPRHRLCSCLVPREFTVNS*LTPFAA
Trigger: AGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAA...TTCCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp GGTGCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGATCTTCACGGTGAACTCCTaGTTGACCCCCTTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: GALALGGAAASRPSFQWIFTVNS*LTPFAA
Trigger: AGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAA...GATCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000576911.5
ENST00000612103.4
ENST00000615114.2
CDS-3UTR CAA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATTCGTTCCCCTTGCCGTaGCAGCGCTCACACGTGTCC +
Preference number: 5 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDSFPLP*QRSHVS
Trigger: GGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGA...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp AGAACCAAGCCCCTGACTAGCAACAGTGGCAGGGCTTCAGTTCCCAAGGCAGCTTGGCAATGCTGCACCTaGGTGCCGGGCTCGTTCCCC +
Preference number: 5 (lower is better)
Translates to: RTKPLTSNSGRASVPKAAWQCCT*VPGSFP
Trigger: GGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCCA...AGCTGCCTTGGGAACTGAAGCCCTGCCACTGTTGCTAGTCAGGGGCTTGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS TCA 90 bp GCACAGGCTCGTCTCCTCAGGGTCACGGGGGAAAGACAGCCAGGCTaGGTTCACCAACTCCCCCAATTCCCAGCATACGTTCTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: AQARLLRVTGERQPG*VHQLPQFPAYVLWE
Trigger: CTCCCAGAGAACGTATGCTGGGAATTGGGGGAGTTGGTGAACTCAGCCTGGCTGTCTTTCCCCCGTGACCCTGAGGAGACGAGCCTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS GCA 90 bp GAAGAGAGGGACCCAACCTTGGCAGGGGCGGACACCCTGAGCCAGTaGAGCGGTGAGAACCTAAGGACCATGCCCTCAAAGCTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: EERDPTLAGADTLSQ*SGENLRTMPSKLLY
Trigger: GTACAGAAGCTTTGAGGGCATGGTCCTTAGGTTCTCACCGCTGCACTGGCTCAGGGTGTCCGCCCCTGCCAAGGTTGGGTCCCTCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576180.1
ENST00000632730.1
CDS-3UTR CAA 90 bp ACAGCTCCTCGGGGTCCACAGTGGGGCCTCCCTTCCAGTAGCTATGCTGGGAGCTTCACGGTGAACTCCTaGTTGACCCCCTTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: TAPRGPQWGLPSSSYAGSFTVNS*LTPFAA
Trigger: AGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAA...GCTCCCAGCATAGCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGGAGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CAA 90 bp CGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCGTTCCCCTTGCCGTaGCAGCGCTCACACGTGTCC +
Preference number: 5 (lower is better)
Translates to: RGERCCPMILLLPRPSRGSFPLP*QRSHVS
Trigger: GGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGA...GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp ACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCCGGGCTCGTTCCCCTaGCCGTTGCAGCGCTCACAC +
Preference number: 5 (lower is better)
Translates to: TFPWREVLSHDFAVAKAVPGSFP*PLQRSH
Trigger: GTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGG...GACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp GAAGAGGATGAGAACTCGCCAAAGATCTTCCTGAACAGCTCCTCGGGGTCCACACCGGGCTCGTTCCCCTaGCCGTTGCAGCGCTCACAC +
Preference number: 5 (lower is better)
Translates to: EEDENSPKIFLNSSSGSTPGSFP*PLQRSH
Trigger: GTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGG...TGTGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTTCTCATCCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CAA 90 bp TGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTACAAAAGGGCCTGTGTaGATGGTTTCCATGCCGGAG +
Preference number: 5 (lower is better)
Translates to: CCCQGRPEALRVGAQCCCTKGPV*MVSMPE
Trigger: CTCCGGCATGGAAACCATCAACACAGGCCCTTTTGT...ACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp CCGGGCTCGTTCCCCTTGCCGTTGCAGCGCTCACACGTGTCCATGATGTTCACGACTCGCTTTTTCTGCTaGGCTTGTCCTGCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: PGSFPLPLQRSHVSMMFTTRFFC*ACPAPL
Trigger: CAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAGT...CGTGAACATCATGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR CAA 90 bp GATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTCCCATGATTTTGCTGTaGCCAAGGCCGTCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: DFAVAKAVQRLCGWELSAPMILL*PRPSRG
Trigger: GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGG...AGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp CTGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGAACCTCCCGGAGGTTaGCTGAGAAGGAAATTAATC +
Preference number: 5 (lower is better)
Translates to: LGLYVPPRHRLCSCLVPREPPGG*LRRKLI
Trigger: GATTAATTTCCTTCTCAGCAAACCTCCGGGAGGTTC...CCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS TCA 90 bp GGACCCAACCTTGGCAGGGGCGGACACCCTGAGCCAGTGCAGCGGTaGGAACCTAAGGACCATGCCCTCAAAGCTTCTGTACAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: GPNLGRGGHPEPVQR*EPKDHALKASVQKS
Trigger: GCTTTTCTGTACAGAAGCTTTGAGGGCATGGTCCTTAGGTTCTCACCGCTGCACTGGCTCAGGGTGTCCGCCCCTGCCAAGGTTGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576180.1
ENST00000632730.1
CDS GCA 90 bp TCCCAGGCCCCGCTAACCAGTGTGGGAGTGATGCCAGCCAGGAACTaGTTCCCATGCGATTATAGACTCAAGGCCTGTGGCTTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: SQAPLTSVGVMPARN*FPCDYRLKACGLWS
Trigger: GGACCACAAGCCACAGGCCTTGAGTCTATAATCGCATGGGAAGCAGTTCCTGGCTGGCATCACTCCCACACTGGTTAGCGGGGCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS GCA 90 bp GGTGCTGGCAGCACACAGGCAGCCATCACTGTGGCAAAAGGGATATaGACCGCCCGAGTCTTCTGCTCTTGGAGCCAGACACTGGACAGA +
Preference number: 5 (lower is better)
Translates to: GAGSTQAAITVAKGI*TARVFCSWSQTLDR
Trigger: TCTGTCCAGTGTCTGGCTCCAAGAGCAGAAGACTCGGGCGGTGCATATCCCTTTTGCCACAGTGATGGCTGCCTGTGTGCTGCCAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS-3UTR CAA 90 bp CTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTGGCAATGCTGCACCTaGGTGCCGGGCTCGTTCCCC +
Preference number: 5 (lower is better)
Translates to: LPVKTTCQEELILEPPGGWQCCT*VPGSFP
Trigger: GGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCCA...ACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp CTGAGCCAGGGGCCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGACAAAAGGGCCTGTGTaGATGGTTTCCATGCCGGAG +
Preference number: 5 (lower is better)
Translates to: LSQGPSPTNGQETATSLWTKGPV*MVSMPE
Trigger: CTCCGGCATGGAAACCATCAACACAGGCCCTTTTGT...CCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGCCCCTGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp AGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCAGAACCCATGATTTTGCTGTaGCCAAGGCCGTCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: RQLKSGQHSAAMGCGSAEPMILL*PRPSRG
Trigger: GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGG...TTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp CTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGATCTTTTTCCCCATGATTTTGCTGTaGCCAAGGCCGTCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: LALGGAAASRPSFQWIFFPMILL*PRPSRG
Trigger: GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGG...GAAAAAGATCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000576911.5
ENST00000612103.4
ENST00000615114.2
CDS-3UTR CAA 90 bp CTGAGCCAGGGGCCGTCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGTGTTGTCCCATGATTTaGCTGTTGCCAAGGCCGTCC +
Preference number: 5 (lower is better)
Translates to: LSQGPSPTNGQETATSLWCCPMI*LLPRPS
Trigger: GGACGGCCTTGGCAACAGCAAAATCATGGGACAACA...CCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGACGGCCCCTGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp GGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGAAGAACCTCCCGGAGGTTaGCTGAGAAGGAAATTAATC +
Preference number: 5 (lower is better)
Translates to: GLYVPPRHRLCSCLVPREEPPGG*LRRKLI
Trigger: GATTAATTTCCTTCTCAGCAAACCTCCGGGAGGTTC...TTCCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS GCA 90 bp GTTCACCAACTCCCCCAATTCCCAGCATACGTTCTCTGGGAGCAGTaGCACAACCAGCTCTTCTCAGTCAGTGGTGCAAGCCGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: VHQLPQFPAYVLWEQ*HNQLFSVSGASRGR
Trigger: CCTCCCACGGCTTGCACCACTGACTGAGAAGAGCTGGTTGTGGCACTGCTCCCAGAGAACGTATGCTGGGAATTGGGGGAGTTGGTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS GCA 90 bp GCTTTCCTTTTCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTaGATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: AFLFNGQETATSLWG*ILLPGLSTVTFPWR
Trigger: TCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGAAAAGGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574393.1
ENST00000633170.1
CDS-3UTR CAA 90 bp TGGGCCTCTACGTGCCTCCCAGGCACCGACTGTGCAGCTGCTTGGTACCCCGGGAACTTCTCCTTGGCTTaGGGATCATCCTTATTTGTG +
Preference number: 5 (lower is better)
Translates to: WASTCLPGTDCAAAWYPGNFSLA*GSSLFV
Trigger: CACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTT...CCCGGGGTACCAAGCAGCTGCACAGTCGGTGCCTGGGAGGCACGTAGAGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp ATGCTGGGAGCCGCTGGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGCATCGTATGGGAGAACTTCTCCTaGGCTTTGGGATCATCCTTA +
Preference number: 5 (lower is better)
Translates to: MLGAAGPRIEACRAVGIVWENFS*ALGSSL
Trigger: TAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCCA...TACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CAA 90 bp ATGCTGGGAGCCGCTGGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGCATCGTAGACCCCCTTTGCAGCTaGATTGAATGTCAACTCCAT +
Preference number: 5 (lower is better)
Translates to: MLGAAGPRIEACRAVGIVDPLCS*IECQLH
Trigger: ATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGTC...TACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCGGCTCCCAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CAA 90 bp ATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGACAAAAGGGCCTGTGTaGATGGTTTCCATGCCGGAG +
Preference number: 5 (lower is better)
Translates to: ILLLPRPSRGSAGGSSVLTKGPV*MVSMPE
Trigger: CTCCGGCATGGAAACCATCAACACAGGCCCTTTTGT...CAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp GCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCAGAAGGTGTTGTCCCATGATTTaGCTGTTGCCAAGGCCGTCC +
Preference number: 5 (lower is better)
Translates to: AAEVWPAQCCNGLWLSRRCCPMI*LLPRPS
Trigger: GGACGGCCTTGGCAACAGCAAAATCATGGGACAACA...CCTTCTGCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp TGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTGAACCTCCCGGAGGTTaGCTGAGAAGGAAATTAATC +
Preference number: 5 (lower is better)
Translates to: CCCQGRPEALRVGAQCCCEPPGG*LRRKLI
Trigger: GATTAATTTCCTTCTCAGCAAACCTCCGGGAGGTTC...ACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp TTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTGAGCACCGCGCAGCCATCTaGGCCCGGGGACTCTGCGCC +
Preference number: 5 (lower is better)
Translates to: FQIRVLALQESNHLPLPEHRAAI*ARGLCA
Trigger: GGCGCAGAGTCCCCGGGCCAAGATGGCTGCGCGGTG...CTCAGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS GCA 90 bp GCAGCCATCACTGTGGCAAAAGGGATATGCACCGCCCGAGTCTTCTaGTCTTGGAGCCAGACACTGGACAGAAGCAAGTGCAGAGAGCAC +
Preference number: 5 (lower is better)
Translates to: AAITVAKGICTARVF*SWSQTLDRSKCREH
Trigger: GTGCTCTCTGCACTTGCTTCTGTCCAGTGTCTGGCTCCAAGAGCAGAAGACTCGGGCGGTGCATATCCCTTTTGCCACAGTGATGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CCA 90 bp AAGGGATATGCACCGCCCGAGTCTTCTGCTCTTGGAGCCAGACACTaGACAGAAGCAAGTGCAGAGAGCACAACCCAGGGTGAACCCTTC +
Preference number: 5 (lower is better)
Translates to: KGYAPPESSALGARH*TEASAESTTQGEPF
Trigger: GAAGGGTTCACCCTGGGTTGTGCTCTCTGCACTTGCTTCTGTCCAGTGTCTGGCTCCAAGAGCAGAAGACTCGGGCGGTGCATATCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS-3UTR CAA 90 bp CTCCTCGGGGTCCACAGTGGGGCCTCCCTTCCAGTAGCTATGCTGGGAGCCGCTTGGGATCATCCTTATTaGTGTCAGGGTGATACTTCT +
Preference number: 5 (lower is better)
Translates to: LLGVHSGASLPVAMLGAAWDHPY*CQGDTS
Trigger: AGAAGTATCACCCTGACACAAATAAGGATGATCCCA...AGCGGCTCCCAGCATAGCTACTGGAAGGGAGGCCCCACTGTGGACCCCGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CAA 90 bp CCGGGCTCGTTCCCCTTGCCGTTGCAGCGCTCACACGTGTCCATGATGTTCACGGACCCCCTTTGCAGCTaGATTGAATGTCAACTCCAT +
Preference number: 5 (lower is better)
Translates to: PGSFPLPLQRSHVSMMFTDPLCS*IECQLH
Trigger: ATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGTC...CGTGAACATCATGGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000575106.5
ENST00000576911.5
ENST00000615114.2
ENST00000633082.1
CDS-3UTR CAA 90 bp TGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGACCCCCTTTGCAGCTaGATTGAATGTCAACTCCAT +
Preference number: 5 (lower is better)
Translates to: WGCILLPGLSTVTFPWREDPLCS*IECQLH
Trigger: ATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGTC...CTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp CCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTGTCGTTCCCCTTGCCGTaGCAGCGCTCACACGTGTCC +
Preference number: 5 (lower is better)
Translates to: PVKTTCQEELILEPPGGLSFPLP*QRSHVS
Trigger: GGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGA...CAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp ACACGTGTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTGCAGCTTGTCGTTCCCCTTGCCGTaGCAGCGCTCACACGTGTCC +
Preference number: 5 (lower is better)
Translates to: TRVHDVHGELLVDPLCSLSFPLP*QRSHVS
Trigger: GGACACGTGTGAGCGCTGCAACGGCAAGGGGAACGA...CAAGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATGGACACGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000575106.5
ENST00000576911.5
ENST00000615114.2
ENST00000633082.1
CDS-3UTR CAA 90 bp CCCTCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCAACTCGCTTTTTCTGCTaGGCTTGTCCTGCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: PSMPGLQQQDSIVRDRRPTRFFC*ACPAPL
Trigger: CAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAGT...TGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp TGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTTGGGATCATCCTTATTaGTGTCAGGGTGATACTTCT +
Preference number: 5 (lower is better)
Translates to: CCCQGRPEALRVGAQCCCWDHPY*CQGDTS
Trigger: AGAAGTATCACCCTGACACAAATAAGGATGATCCCA...ACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp TGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGAGCTCAGTGCTGCTGTAACTTCTCCTTGGCTTaGGGATCATCCTTATTTGTG +
Preference number: 5 (lower is better)
Translates to: CCCQGRPEALRVGAQCCCNFSLA*GSSLFV
Trigger: CACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTT...ACAGCAGCACTGAGCTCCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp CGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTTCACGGTGAACTCCTaGTTGACCCCCTTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: RGERCCPMILLLPRPSRGFTVNS*LTPFAA
Trigger: AGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAA...GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp TTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTGAGCCGGGCTCGTTCCCCTaGCCGTTGCAGCGCTCACAC +
Preference number: 5 (lower is better)
Translates to: FQIRVLALQESNHLPLPEPGSFP*PLQRSH
Trigger: GTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGG...CTCAGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp AGGACTGTACATCCTGACAAGGATCACCACCCACACGGTCAGAGCAGAACCCCCACAAAAGGGCCTGTGTaGATGGTTTCCATGCCGGAG +
Preference number: 5 (lower is better)
Translates to: RTVHPDKDHHPHGQSRTPTKGPV*MVSMPE
Trigger: CTCCGGCATGGAAACCATCAACACAGGCCCTTTTGT...GGGGGTTCTGCTCTGACCGTGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp CCCACGCTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCACTCGCTTTTTCTGCTaGGCTTGTCCTGCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: PTLPVKTTCQEELILEPPTRFFC*ACPAPL
Trigger: CAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAGT...GGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAGCGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp CGCTCACACGTGTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTGCACCCATGATTTTGCTGTaGCCAAGGCCGTCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: RSHVSMMFTVNSLLTPFAPMILL*PRPSRG
Trigger: GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGG...TGCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATGGACACGTGTGAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR CAA 90 bp TCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGTGTTGTCCCATGATTTaGCTGTTGCCAAGGCCGTCC +
Preference number: 5 (lower is better)
Translates to: SPTNGQETATSLWGCILLCCPMI*LLPRPS
Trigger: GGACGGCCTTGGCAACAGCAAAATCATGGGACAACA...CAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp CGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTGTTGTCCCATGATTTaGCTGTTGCCAAGGCCGTCC +
Preference number: 5 (lower is better)
Translates to: RGERCCPMILLLPRPSRGCCPMI*LLPRPS
Trigger: GGACGGCCTTGGCAACAGCAAAATCATGGGACAACA...GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS TCA 90 bp CCCGCCGTCGCGCATGCTGGGAAAATGTTTGTGTTGATCCTCGCTTaGCCTCACAGGCACCCTGGATTCTTCACAGATTCACACTTCACC +
Preference number: 5 (lower is better)
Translates to: PAVAHAGKMFVLILA*PHRHPGFFTDSHFT
Trigger: GGTGAAGTGTGAATCTGTGAAGAATCCAGGGTGCCTGTGAGGTCAAGCGAGGATCAACACAAACATTTTCCCAGCATGCGCGACGGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CCA 90 bp AAGTGCTTCCAAAAGTCTCACGAACTCTCCCGCCGTCGCGCATGCTaGGAAAATGTTTGTGTTGATCCTCGCTTGACCTCACAGGCACCC +
Preference number: 5 (lower is better)
Translates to: KCFQKSHELSRRRAC*ENVCVDPRLTSQAP
Trigger: GGGTGCCTGTGAGGTCAAGCGAGGATCAACACAAACATTTTCCCAGCATGCGCGACGGCGGGAGAGTTCGTGAGACTTTTGGAAGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CCA 90 bp ATCACTGTGGCAAAAGGGATATGCACCGCCCGAGTCTTCTGCTCTTaGAGCCAGACACTGGACAGAAGCAAGTGCAGAGAGCACAACCCA +
Preference number: 5 (lower is better)
Translates to: ITVAKGICTARVFCS*SQTLDRSKCREHNP
Trigger: TGGGTTGTGCTCTCTGCACTTGCTTCTGTCCAGTGTCTGGCTCCAAGAGCAGAAGACTCGGGCGGTGCATATCCCTTTTGCCACAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CCA 90 bp GCCCTGGCCCTTGGAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTaGATCTTTTTCCTGAGCCAAAGAGATAGGCTGTTACCTTATACT +
Preference number: 5 (lower is better)
Translates to: ALALGGAAASRPSFQ*IFFLSQRDRLLPYT
Trigger: AGTATAAGGTAACAGCCTATCTCTTTGGCTCAGGAAAAAGATCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTCCAAGGGCCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574393.1
ENST00000633170.1
CDS-3UTR CAA 90 bp TGGGGCTGCATCCTACTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGTGGGATCATCCTTATTaGTGTCAGGGTGATACTTCT +
Preference number: 5 (lower is better)
Translates to: WGCILLPGLSTVTFPWREWDHPY*CQGDTS
Trigger: AGAAGTATCACCCTGACACAAATAAGGATGATCCCA...CTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAGTAGGATGCAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp CGCTGGCCCCAGGATCGAAGCCTGCAGAGCCGTAGGCATCGTACTGCTTCCTCTTGGGATCATCCTTATTaGTGTCAGGGTGATACTTCT +
Preference number: 5 (lower is better)
Translates to: RWPQDRSLQSRRHRTASSWDHPY*CQGDTS
Trigger: AGAAGTATCACCCTGACACAAATAAGGATGATCCCA...AGAGGAAGCAGTACGATGCCTACGGCTCTGCAGGCTTCGATCCTGGGGCCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CAA 90 bp CCCAAGGCAGCTGAAGTCTGGCCAGCACAGTGCTGCAATGGGCTGTGGCTCAGCAACTTCTCCTTGGCTTaGGGATCATCCTTATTTGTG +
Preference number: 5 (lower is better)
Translates to: PKAAEVWPAQCCNGLWLSNFSLA*GSSLFV
Trigger: CACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTT...GCTGAGCCACAGCCCATTGCAGCACTGTGCTGGCCAGACTTCAGCTGCCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATTGGGAGAACTTCTCCTaGGCTTTGGGATCATCCTTA +
Preference number: 5 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDWENFS*ALGSSL
Trigger: TAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCCA...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp CTGCCCGGGCTGTCCACTGTGACCTTTCCGTGGAGAGAGGTGTTGTCCCATGATGACCCCCTTTGCAGCTaGATTGAATGTCAACTCCAT +
Preference number: 5 (lower is better)
Translates to: LPGLSTVTFPWREVLSHDDPLCS*IECQLH
Trigger: ATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGTC...ATCATGGGACAACACCTCTCTCCACGGAAAGGTCACAGTGGACAGCCCGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp TGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCTGCGGGTGGGGACCCCCTTTGCAGCTaGATTGAATGTCAACTCCAT +
Preference number: 5 (lower is better)
Translates to: CCPMILLLPRPSRGSAGGDPLCS*IECQLH
Trigger: ATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGTC...CCCACCCGCAGAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp GTTGCAGCGCTCACACGTGTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCTTCACGGTGAACTCCTaGTTGACCCCCTTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: VAALTRVHDVHGELLVDPFTVNS*LTPFAA
Trigger: AGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAA...GGGGTCAACAAGGAGTTCACCGTGAACATCATGGACACGTGTGAGCGCTGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000575106.5
ENST00000576911.5
ENST00000615114.2
ENST00000633082.1
CDS-3UTR CAA 90 bp AGTATTCCTGAGGCTGATCAAACACGGTCTGGAAATCTCCAAATGAAGAGGATGCCGGGCTCGTTCCCCTaGCCGTTGCAGCGCTCACAC +
Preference number: 5 (lower is better)
Translates to: SIPEADQTRSGNLQMKRMPGSFP*PLQRSH
Trigger: GTGTGAGCGCTGCAACGGCAAGGGGAACGAGCCCGG...CATCCTCTTCATTTGGAGATTTCCAGACCGTGTTTGATCAGCCTCAGGAATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CAA 90 bp TGGGAGCAAGGACTGTACATCCTGACAAGGATCACCACCCACACGGTCAGAGCAACAAAAGGGCCTGTGTaGATGGTTTCCATGCCGGAG +
Preference number: 5 (lower is better)
Translates to: WEQGLYILTRITTHTVRATKGPV*MVSMPE
Trigger: CTCCGGCATGGAAACCATCAACACAGGCCCTTTTGT...TGCTCTGACCGTGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCTTGCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp CGCTCACACGTGTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTGCAACTCGCTTTTTCTGCTaGGCTTGTCCTGCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: RSHVSMMFTVNSLLTPFATRFFC*ACPAPL
Trigger: CAGGGGAGCAGGACAAGCCAAGCAGAAAAAGCGAGT...TGCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATGGACACGTGTGAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS-3UTR CAA 90 bp GTTGCAGCGCTCACACGTGTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCTGTTGTCCCATGATTTaGCTGTTGCCAAGGCCGTCC +
Preference number: 5 (lower is better)
Translates to: VAALTRVHDVHGELLVDPCCPMI*LLPRPS
Trigger: GGACGGCCTTGGCAACAGCAAAATCATGGGACAACA...GGGGTCAACAAGGAGTTCACCGTGAACATCATGGACACGTGTGAGCGCTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576911.5
ENST00000615114.2
CDS TCA 90 bp TCACGAACTCTCCCGCCGTCGCGCATGCTGGGAAAATGTTTGTGTTaGTCCTCGCTTGACCTCACAGGCACCCTGGATTCTTCACAGATT +
Preference number: 5 (lower is better)
Translates to: SRTLPPSRMLGKCLC*SSLDLTGTLDSSQI
Trigger: AATCTGTGAAGAATCCAGGGTGCCTGTGAGGTCAAGCGAGGATCAACACAAACATTTTCCCAGCATGCGCGACGGCGGGAGAGTTCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS GCA 90 bp GTGAAGTGCTTCCAAAAGTCTCACGAACTCTCCCGCCGTCGCGCATaGTGGGAAAATGTTTGTGTTGATCCTCGCTTGACCTCACAGGCA +
Preference number: 5 (lower is better)
Translates to: VKCFQKSHELSRRRA*WENVCVDPRLTSQA
Trigger: TGCCTGTGAGGTCAAGCGAGGATCAACACAAACATTTTCCCAGCATGCGCGACGGCGGGAGAGTTCGTGAGACTTTTGGAAGCACTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS-3UTR CAA 90 bp TCACCTACCAATGGACAGGAAACTGCCACCAGCCTCTGGGGCTGCATCCTACTGTGGGAGAACTTCTCCTaGGCTTTGGGATCATCCTTA +
Preference number: 5 (lower is better)
Translates to: SPTNGQETATSLWGCILLWENFS*ALGSSL
Trigger: TAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCCA...CAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGGTAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp GATGAGAACTCGCCAAAGATCTTCCTGAACAGCTCCTCGGGGTCCACAGTGGGGTGGGAGAACTTCTCCTaGGCTTTGGGATCATCCTTA +
Preference number: 5 (lower is better)
Translates to: DENSPKIFLNSSSGSTVGWENFS*ALGSSL
Trigger: TAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCCA...CCCCACTGTGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTTCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CAA 90 bp CTCCCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTCACGGTGAACTCCTaGTTGACCCCCTTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: LPVKTTCQEELILEPPGGFTVNS*LTPFAA
Trigger: AGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAA...ACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp CAATTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTTGGCAATGCTGCACCTaGGTGCCGGGCTCGTTCCCC +
Preference number: 5 (lower is better)
Translates to: QFQIRVLALQESNHLPLPWQCCT*VPGSFP
Trigger: GGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCCA...AGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp CCCTCCATGCCTGGCTTACAACAACAGGACTCAATAGTCAGGGACAGGCGGCCAGAACCTCCCGGAGGTTaGCTGAGAAGGAAATTAATC +
Preference number: 5 (lower is better)
Translates to: PSMPGLQQQDSIVRDRRPEPPGG*LRRKLI
Trigger: GATTAATTTCCTTCTCAGCAAACCTCCGGGAGGTTC...TGGCCGCCTGTCCCTGACTATTGAGTCCTGTTGTTGTAAGCCAGGCATGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS CCA 90 bp AGGAACTGCTTCCCATGCGATTATAGACTCAAGGCCTGTGGCTTGTaGTCCACACTCAAGGAGCAGCCTAAAATTCCTCATGTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: RNCFPCDYRLKACGL*STLKEQPKIPHVLP
Trigger: GGGGAGGACATGAGGAATTTTAGGCTGCTCCTTGAGTGTGGACCACAAGCCACAGGCCTTGAGTCTATAATCGCATGGGAAGCAGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS-3UTR CAA 90 bp TGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAGGCTCGACCCCCTTTGCAGCTaGATTGAATGTCAACTCCAT +
Preference number: 5 (lower is better)
Translates to: WREVLSHDFAVAKAVQRLDPLCS*IECQLH
Trigger: ATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGTC...GAGCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp CCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTGACAAAAGGGCCTGTGTaGATGGTTTCCATGCCGGAG +
Preference number: 5 (lower is better)
Translates to: PVKTTCQEELILEPPGGLTKGPV*MVSMPE
Trigger: CTCCGGCATGGAAACCATCAACACAGGCCCTTTTGT...CAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS CCA 90 bp CTCTTCACCTCATCACTCAAAACCTACAGTGAAAGGCAGAGCCACTaGGCATCCCAGGTCTACCAAGGCCCAGGAATACAGACAAGAGTT +
Preference number: 5 (lower is better)
Translates to: LFTSSLKTYSERQSH*ASQVYQGPGIQTRV
Trigger: AACTCTTGTCTGTATTCCTGGGCCTTGGTAGACCTGGGATGCCCAGTGGCTCTGCCTTTCACTGTAGGTTTTGAGTGATGAGGTGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS-3UTR CAA 90 bp AGGACTGTACATCCTGACAAGGATCACCACCCACACGGTCAGAGCAGAACCCCCTGGGATCATCCTTATTaGTGTCAGGGTGATACTTCT +
Preference number: 5 (lower is better)
Translates to: RTVHPDKDHHPHGQSRTPWDHPY*CQGDTS
Trigger: AGAAGTATCACCCTGACACAAATAAGGATGATCCCA...GGGGGTTCTGCTCTGACCGTGTGGGTGGTGATCCTTGTCAGGATGTACAGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp GATGAGAACTCGCCAAAGATCTTCCTGAACAGCTCCTCGGGGTCCACAGTGGGGAACTTCTCCTTGGCTTaGGGATCATCCTTATTTGTG +
Preference number: 5 (lower is better)
Translates to: DENSPKIFLNSSSGSTVGNFSLA*GSSLFV
Trigger: CACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTT...CCCCACTGTGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTTCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CAA 90 bp TTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGTGGGAGAACTTCTCCTaGGCTTTGGGATCATCCTTA +
Preference number: 5 (lower is better)
Translates to: FPWREVLSHDFAVAKAVQWENFS*ALGSSL
Trigger: TAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCCA...CTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp CAGGATCGAAGCCTGCAGAGCCGTAGGCATCGTACTGCTTCCTCTTCACCTCATAACTTCTCCTTGGCTTaGGGATCATCCTTATTTGTG +
Preference number: 5 (lower is better)
Translates to: QDRSLQSRRHRTASSSPHNFSLA*GSSLFV
Trigger: CACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTT...ATGAGGTGAAGAGGAAGCAGTACGATGCCTACGGCTCTGCAGGCTTCGATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CAA 90 bp CCAAATGAAGAGGATGAGAACTCGCCAAAGATCTTCCTGAACAGCTCCTCGGGGTGGGAGAACTTCTCCTaGGCTTTGGGATCATCCTTA +
Preference number: 5 (lower is better)
Translates to: PNEEDENSPKIFLNSSSGWENFS*ALGSSL
Trigger: TAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCCA...CCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTTCTCATCCTCTTCATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CAA 90 bp CTGCGACATGCTACCAGCAGAGGCTGGGGAATGGGGGTTCTGCTCTCACTGAATAACATTTTCTTAAGTTaGGAAAGGAATCCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LRHATSRGWGMGVLLSLNNIFLS*ERNPSS
Trigger: CGAGGAGGGATTCCTTTCCAAACTTAAGAAAATGTT...ATTCAGTGAGAGCAGAACCCCCATTCCCCAGCCTCTGCTGGTAGCATGTCGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR CAA 90 bp GAAACTGTTGAGAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCCCCATGATTTTGCTGTaGCCAAGGCCGTCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: ETVEKCSSLTCLTTARRSPMILL*PRPSRG
Trigger: GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGG...GGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTCTCAACAGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS TCA 90 bp GAGGGGCTGCTGCTTCCCGGCCTAGTTTCCAGTGGATCTTTTTCCTaGGCCAAAGAGATAGGCTGTTACCTTATACTCAACATTTCAAGG +
Preference number: 5 (lower is better)
Translates to: EGLLLPGLVSSGSFS*AKEIGCYLILNISR
Trigger: CCTTGAAATGTTGAGTATAAGGTAACAGCCTATCTCTTTGGCTCAGGAAAAAGATCCACTGGAAACTAGGCCGGGAAGCAGCAGCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574393.1
ENST00000633170.1
CDS-3UTR CAA 90 bp GAAGAGGATGAGAACTCGCCAAAGATCTTCCTGAACAGCTCCTCGGGGTCCACATGGGATCATCCTTATTaGTGTCAGGGTGATACTTCT +
Preference number: 5 (lower is better)
Translates to: EEDENSPKIFLNSSSGSTWDHPY*CQGDTS
Trigger: AGAAGTATCACCCTGACACAAATAAGGATGATCCCA...TGTGGACCCCGAGGAGCTGTTCAGGAAGATCTTTGGCGAGTTCTCATCCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CAA 90 bp GAAGCCTGCAGAGCCGTAGGCATCGTACTGCTTCCTCTTCACCTCATCACTCAATGGGATCATCCTTATTaGTGTCAGGGTGATACTTCT +
Preference number: 5 (lower is better)
Translates to: EACRAVGIVLLPLHLITQWDHPY*CQGDTS
Trigger: AGAAGTATCACCCTGACACAAATAAGGATGATCCCA...TTGAGTGATGAGGTGAAGAGGAAGCAGTACGATGCCTACGGCTCTGCAGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CAA 90 bp TTTCCGTGGAGAGAGGTGTTGTCCCATGATTTTGCTGTTGCCAAGGCCGTCCAGAACTTCTCCTTGGCTTaGGGATCATCCTTATTTGTG +
Preference number: 5 (lower is better)
Translates to: FPWREVLSHDFAVAKAVQNFSLA*GSSLFV
Trigger: CACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTT...CTGGACGGCCTTGGCAACAGCAAAATCATGGGACAACACCTCTCTCCACGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp AATATTCAATTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTTGGCAATGCTGCACCTaGGTGCCGGGCTCGTTCCCC +
Preference number: 5 (lower is better)
Translates to: NIQFQIRVLALQESNHLPWQCCT*VPGSFP
Trigger: GGGGAACGAGCCCGGCACCAAGGTGCAGCATTGCCA...AGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAATTGAATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp CTTCGTAACTTGATGCAGCTTAAGGCTTCATTTCTAAGCTGTAAGCATGGCCTTCCCATGATTTTGCTGTaGCCAAGGCCGTCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: LRNLMQLKASFLSCKHGLPMILL*PRPSRG
Trigger: GCCTCTGGACGGCCTTGGCAACAGCAAAATCATGGG...AAGGCCATGCTTACAGCTTAGAAATGAAGCCTTAAGCTGCATCAAGTTACGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS TCA 90 bp AGGCTGTCCCAGGTAGCAATGCAACCTTTGATTCATACACATAGCTaGACAGCAGTGACCGCATGCACCGAAGTCATATTACCTCATAGG +
Preference number: 5 (lower is better)
Translates to: RLSQVAMQPLIHTHS*TAVTACTEVILPHR
Trigger: CCTATGAGGTAATATGACTTCGGTGCATGCGGTCACTGCTGTTCAGCTATGTGTATGAATCAAAGGTTGCATTGCTACCTGGGACAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573120.5
ENST00000632459.1
CDS CCA 90 bp TTACCTCATAGGCTTCTGCCAGCTGGGAGAACTTCTCCTTGGCTTTaGGATCATCCTTATTTGTGTCAGGGTGATACTTCTTGGCAAGCT +
Preference number: 5 (lower is better)
Translates to: LPHRLLPAGRTSPWL*DHPYLCQGDTSWQA
Trigger: AGCTTGCCAAGAAGTATCACCCTGACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCCAGCTGGCAGAAGCCTATGAGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573120.5
ENST00000632459.1
CDS CCA 90 bp AGTACTCATAGGCTTCTGCCAGCTGGGAGAACTTCTCCTTGGCTTTaGGATCATCCTTATTTGTGTCAGGGTGATACTTCTTGGCAAGCT +
Preference number: 5 (lower is better)
Translates to: STHRLLPAGRTSPWL*DHPYLCQGDTSWQA
Trigger: AGCTTGCCAAGAAGTATCACCCTGACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCCAGCTGGCAGAAGCCTATGAGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574895.1
ENST00000633931.1
CDS-3UTR CAA 90 bp GTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTGCTGTGGGATCATCCTTATTaGTGTCAGGGTGATACTTCT +
Preference number: 5 (lower is better)
Translates to: VKTTCQEELILEPPGGLLWDHPY*CQGDTS
Trigger: AGAAGTATCACCCTGACACAAATAAGGATGATCCCA...CAGCAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000612103.4
ENST00000614397.4
CDS-3UTR CAA 90 bp GAGGCTGATCAAACACGGTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCTGGGAGAACTTCTCCTaGGCTTTGGGATCATCCTTA +
Preference number: 5 (lower is better)
Translates to: EADQTRSGNLQMKRMRTRWENFS*ALGSSL
Trigger: TAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCCA...GCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGACCGTGTTTGATCAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CAA 90 bp GATCAAACACGGTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAAAGATTCACGGTGAACTCCTaGTTGACCCCCTTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: DQTRSGNLQMKRMRTRQRFTVNS*LTPFAA
Trigger: AGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAA...TCTTTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGACCGTGTTTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575106.5
ENST00000633082.1
CDS-3UTR CAA 90 bp CAATTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTACAAAAGGGCCTGTGTaGATGGTTTCCATGCCGGAG +
Preference number: 5 (lower is better)
Translates to: QFQIRVLALQESNHLPLPTKGPV*MVSMPE
Trigger: CTCCGGCATGGAAACCATCAACACAGGCCCTTTTGT...AGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp GAAGTGTTCTTCATTAACCTGTCTAACGACAGCCCGAAGATCCTGAAACACATGTGTTGTCCCATGATTTaGCTGTTGCCAAGGCCGTCC +
Preference number: 5 (lower is better)
Translates to: EVFFINLSNDSPKILKHMCCPMI*LLPRPS
Trigger: GGACGGCCTTGGCAACAGCAAAATCATGGGACAACA...CATGTGTTTCAGGATCTTCGGGCTGTCGTTAGACAGGTTAATGAAGAACACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000612103.4
ENST00000614397.4
CDS GCA 90 bp CACTTCACCTCTCTCCTCAGGGGACATTACCTCGTAGAGAATTTATaGTTCCTACCCTTACCTTCATCGAAAGGTTTTCTGCAAGCCAGA +
Preference number: 5 (lower is better)
Translates to: HFTSLLRGHYLVENL*FLPLPSSKGFLQAR
Trigger: TCTGGCTTGCAGAAAACCTTTCGATGAAGGTAAGGGTAGGAAGCATAAATTCTCTACGAGGTAATGTCCCCTGAGGAGAGAGGTGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS GCA 90 bp ACACGTGTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTaGAGCTTGATTGAATGTCAACTCCATGAAGTACTCATAGGCTTC +
Preference number: 5 (lower is better)
Translates to: TRVHDVHGELLVDPL*SLIECQLHEVLIGF
Trigger: GAAGCCTATGAGTACTTCATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATGGACACGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574895.1
ENST00000633931.1
CDS CCA 90 bp GTCATATTACCTCATAGGCTTCTGCCAGCTGGGAGAACTTCTCCTTaGCTTTGGGATCATCCTTATTTGTGTCAGGGTGATACTTCTTGG +
Preference number: 5 (lower is better)
Translates to: VILPHRLLPAGRTSP*LWDHPYLCQGDTSW
Trigger: CCAAGAAGTATCACCCTGACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCCAGCTGGCAGAAGCCTATGAGGTAATATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573120.5
ENST00000632459.1
CDS-3UTR CAA 90 bp TTCCAAATTAGAGTTTTAGCCCTGCAAGAGTCTAACCATCTCCCTCTGCCTGAGGACCCCCTTTGCAGCTaGATTGAATGTCAACTCCAT +
Preference number: 5 (lower is better)
Translates to: FQIRVLALQESNHLPLPEDPLCS*IECQLH
Trigger: ATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGTC...CTCAGGCAGAGGGAGATGGTTAGACTCTTGCAGGGCTAAAACTCTAATTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp CTTCGTAACTTGATGCAGCTTAAGGCTTCATTTCTAAGCTGTAAGCATGGCCTTTTCACGGTGAACTCCTaGTTGACCCCCTTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: LRNLMQLKASFLSCKHGLFTVNS*LTPFAA
Trigger: AGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAA...AAGGCCATGCTTACAGCTTAGAAATGAAGCCTTAAGCTGCATCAAGTTACGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp CCAGTGAAGACAACCTGTCAGGAAGAACTCATTCTGGAACCTCCCGGAGGTTTGAACATTTTCTTAAGTTaGGAAAGGAATCCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: PVKTTCQEELILEPPGGLNIFLS*ERNPSS
Trigger: CGAGGAGGGATTCCTTTCCAAACTTAAGAAAATGTT...CAAACCTCCGGGAGGTTCCAGAATGAGTTCTTCCTGACAGGTTGTCTTCACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262375.11
ENST00000612103.4
CDS-3UTR CAA 90 bp CTTCGTAACTTGATGCAGCTTAAGGCTTCATTTCTAAGCTGTAAGCATGGCCTTTGTTGTCCCATGATTTaGCTGTTGCCAAGGCCGTCC +
Preference number: 5 (lower is better)
Translates to: LRNLMQLKASFLSCKHGLCCPMI*LLPRPS
Trigger: GGACGGCCTTGGCAACAGCAAAATCATGGGACAACA...AAGGCCATGCTTACAGCTTAGAAATGAAGCCTTAAGCTGCATCAAGTTACGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
CDS-3UTR CAA 90 bp GTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAAAGATCTTCCTGAACAACTTCTCCTTGGCTTaGGGATCATCCTTATTTGTG +
Preference number: 5 (lower is better)
Translates to: VWKSPNEEDENSPKIFLNNFSLA*GSSLFV
Trigger: CACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTT...GTTCAGGAAGATCTTTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS-3UTR CAA 90 bp GATCAAACACGGTCTGGAAATCTCCAAATGAAGAGGATGAGAACTCGCCAAAGAAACTTCTCCTTGGCTTaGGGATCATCCTTATTTGTG +
Preference number: 5 (lower is better)
Translates to: DQTRSGNLQMKRMRTRQRNFSLA*GSSLFV
Trigger: CACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTT...TCTTTGGCGAGTTCTCATCCTCTTCATTTGGAGATTTCCAGACCGTGTTTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570857.5
ENST00000575106.5
ENST00000631547.1
ENST00000633082.1
CDS GCA 90 bp AGGGCCTCAATCTGTTCATCTGATTTTCTAGAACACACAAACTTCTaGACTCCAGATCATCAACTTGACCACACGACACTGAAAAATATG +
Preference number: 5 (lower is better)
Translates to: RASICSSDFLEHTNF*TPDHQLDHTTLKNM
Trigger: CATATTTTTCAGTGTCGTGTGGTCAAGTTGATGATCTGGAGTGCAGAAGTTTGTGTGTTCTAGAAAATCAGATGAACAGATTGAGGCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CAA 90 bp GGGCCGCAAGAGGTCAGGGAAGACGCAAAGGCGGGGACGCTCAGCTaGCGGCTCAGCCATGCCCCCACCACGCCCTCCCTGGGCGGCCGG +
Preference number: 6 (lower is better)
Translates to: GPQEVREDAKAGTLS*RLSHAPTTPSLGGR
Trigger: CCGGCCGCCCAGGGAGGGCGTGGTGGGGGCATGGCTGAGCCGCAAGCTGAGCGTCCCCGCCTTTGCGTCTTCCCTGACCTCTTGCGGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000570857.5
ENST00000572974.1
ENST00000574895.1
ENST00000575106.5
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
ENST00000631547.1
ENST00000632858.1
ENST00000633082.1
ENST00000633931.1
CDS GCA 72 bp AGGTCAGGGAAGACGCAAAGGCGGGGACGCTCAGCTTaGGGCTCAGCCATGCCCCCACCACGCCCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: RSGKTQRRGRSA*GSAMPPPRPPW
Trigger: CCAGGGAGGGCGTGGTGGGGGCATGGCTGAGCCGCAAGCTGAGCGTCCCCGCCTTTGCGTCTTCCCTGACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000570857.5
ENST00000572974.1
ENST00000574895.1
ENST00000575106.5
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
ENST00000631547.1
ENST00000632858.1
ENST00000633082.1
ENST00000633931.1
CDS CAA 72 bp GAGGTCAGGGAAGACGCAAAGGCGGGGACGCTCAGCTaGCGGCTCAGCCATGCCCCCACCACGCCCTCCCTG +
Preference number: 6 (lower is better)
Translates to: EVREDAKAGTLS*RLSHAPTTPSL
Trigger: CAGGGAGGGCGTGGTGGGGGCATGGCTGAGCCGCAAGCTGAGCGTCCCCGCCTTTGCGTCTTCCCTGACCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000431375.6
ENST00000570857.5
ENST00000572974.1
ENST00000574895.1
ENST00000575106.5
ENST00000576911.5
ENST00000612103.4
ENST00000614397.4
ENST00000615114.2
ENST00000631547.1
ENST00000632858.1
ENST00000633082.1
ENST00000633931.1
CDS CAA 72 bp CACCCTCGCAGCACATGGGAAGAGAGGGACCCAACCTaGGCAGGGGCGGACACCCTGAGCCAGTGCAGCGGT +
Preference number: 6 (lower is better)
Translates to: HPRSTWEERDPT*AGADTLSQCSG
Trigger: ACCGCTGCACTGGCTCAGGGTGTCCGCCCCTGCCAAGGTTGGGTCCCTCTCTTCCCATGTGCTGCGAGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576180.1
ENST00000632730.1
CDS CCA 72 bp CAGCTCTTCTCAGTCAGTGGTGCAAGCCGTGGGAGGTaGAGTCTCGGGCAGAGCCTTACCATGCCGGAGCCG +
Preference number: 6 (lower is better)
Translates to: QLFSVSGASRGR*SLGQSLTMPEP
Trigger: CGGCTCCGGCATGGTAAGGCTCTGCCCGAGACTCCACCTCCCACGGCTTGCACCACTGACTGAGAAGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CCA 72 bp ATACAGGGTGCGTGGCTGAGGTCGCTCCCTGGCCCTTaGAACCACAGGACCCTGGAGAAGCCAGGGAATAGC +
Preference number: 6 (lower is better)
Translates to: IQGAWLRSLPGP*NHRTLEKPGNS
Trigger: GCTATTCCCTGGCTTCTCCAGGGTCCTGTGGTTCCAAGGGCCAGGGAGCGACCTCAGCCACGCACCCTGTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CCA 72 bp AAAGAACTCACAGGCAGCCAGCACCCTCGCAGCACATaGGAAGAGAGGGACCCAACCTTGGCAGGGGCGGAC +
Preference number: 6 (lower is better)
Translates to: KELTGSQHPRST*EERDPTLAGAD
Trigger: GTCCGCCCCTGCCAAGGTTGGGTCCCTCTCTTCCCATGTGCTGCGAGGGTGCTGGCTGCCTGTGAGTTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576180.1
ENST00000632730.1
CDS CCA 72 bp GCAGAGTCAGCAGCCAAGGCTTCCGCCGGGAAGCTTTaGAAAGAACTCACAGGCAGCCAGCACCCTCGCAGC +
Preference number: 6 (lower is better)
Translates to: AESAAKASAGKL*KELTGSQHPRS
Trigger: GCTGCGAGGGTGCTGGCTGCCTGTGAGTTCTTTCCAAAGCTTCCCGGCGGAAGCCTTGGCTGCTGACTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576180.1
ENST00000632730.1
CDS CAA 90 bp TGTGGACCGAGCAGAGTCAGCAGCCAAGGCTTCCGCCGGGAAGCTTaGGAAAGAACTCACAGGCAGCCAGCACCCTCGCAGCACATGGGA +
Preference number: 6 (lower is better)
Translates to: CGPSRVSSQGFRREA*ERTHRQPAPSQHMG
Trigger: TCCCATGTGCTGCGAGGGTGCTGGCTGCCTGTGAGTTCTTTCCAAAGCTTCCCGGCGGAAGCCTTGGCTGCTGACTCTGCTCGGTCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576180.1
ENST00000632730.1
CDS CCA 72 bp CCACAACCAGCTCTTCTCAGTCAGTGGTGCAAGCCGTaGGAGGTGGAGTCTCGGGCAGAGCCTTACCATGCC +
Preference number: 6 (lower is better)
Translates to: PQPALLSQWCKP*EVESRAEPYHA
Trigger: GGCATGGTAAGGCTCTGCCCGAGACTCCACCTCCCACGGCTTGCACCACTGACTGAGAAGAGCTGGTTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CAA 72 bp AGCAGAGTCAGCAGCCAAGGCTTCCGCCGGGAAGCTTaGGAAAGAACTCACAGGCAGCCAGCACCCTCGCAG +
Preference number: 6 (lower is better)
Translates to: SRVSSQGFRREA*ERTHRQPAPSQ
Trigger: CTGCGAGGGTGCTGGCTGCCTGTGAGTTCTTTCCAAAGCTTCCCGGCGGAAGCCTTGGCTGCTGACTCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576180.1
ENST00000632730.1
CDS CCA 72 bp GCACCGCCCGAGTCTTCTGCTCTTGGAGCCAGACACTaGACAGAAGCAAGTGCAGAGAGCACAACCCAGGGT +
Preference number: 6 (lower is better)
Translates to: APPESSALGARH*TEASAESTTQG
Trigger: ACCCTGGGTTGTGCTCTCTGCACTTGCTTCTGTCCAGTGTCTGGCTCCAAGAGCAGAAGACTCGGGCGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CCA 72 bp GGACAGGTGCTGGCAGCACACAGGCAGCCATCACTGTaGCAAAAGGGATATGCACCGCCCGAGTCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: GQVLAAHRQPSL*QKGYAPPESSA
Trigger: AGCAGAAGACTCGGGCGGTGCATATCCCTTTTGCCACAGTGATGGCTGCCTGTGTGCTGCCAGCACCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS TCA 72 bp CTCCCGCCGTCGCGCATGCTGGGAAAATGTTTGTGTTaGTCCTCGCTTGACCTCACAGGCACCCTGGATTCT +
Preference number: 6 (lower is better)
Translates to: LPPSRMLGKCLC*SSLDLTGTLDS
Trigger: AGAATCCAGGGTGCCTGTGAGGTCAAGCGAGGATCAACACAAACATTTTCCCAGCATGCGCGACGGCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS TCA 72 bp CTTGGCGCAGGGACATGGCCTTCACACTGGACTGTATaGCACACCAGGCTGTCCCAGGTAGCAATGCAACCT +
Preference number: 6 (lower is better)
Translates to: LGAGTWPSHWTV*HTRLSQVAMQP
Trigger: AGGTTGCATTGCTACCTGGGACAGCCTGGTGTGTCATACAGTCCAGTGTGAAGGCCATGTCCCTGCGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573120.5
ENST00000632459.1
CDS GCA 72 bp CTCCCCCAATTCCCAGCATACGTTCTCTGGGAGCAGTaGCACAACCAGCTCTTCTCAGTCAGTGGTGCAAGC +
Preference number: 6 (lower is better)
Translates to: LPQFPAYVLWEQ*HNQLFSVSGAS
Trigger: GCTTGCACCACTGACTGAGAAGAGCTGGTTGTGGCACTGCTCCCAGAGAACGTATGCTGGGAATTGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS GCA 72 bp CCGCTAACCAGTGTGGGAGTGATGCCAGCCAGGAACTaGTTCCCATGCGATTATAGACTCAAGGCCTGTGGC +
Preference number: 6 (lower is better)
Translates to: PLTSVGVMPARN*FPCDYRLKACG
Trigger: GCCACAGGCCTTGAGTCTATAATCGCATGGGAAGCAGTTCCTGGCTGGCATCACTCCCACACTGGTTAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS GCA 72 bp AGCACACAGGCAGCCATCACTGTGGCAAAAGGGATATaGACCGCCCGAGTCTTCTGCTCTTGGAGCCAGACA +
Preference number: 6 (lower is better)
Translates to: STQAAITVAKGI*TARVFCSWSQT
Trigger: TGTCTGGCTCCAAGAGCAGAAGACTCGGGCGGTGCATATCCCTTTTGCCACAGTGATGGCTGCCTGTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS GCA 72 bp CTTAGCCTGTGCTTTCCTTTTCAATGGACAGGAAACTaGCACCAGCCTCTGGGGCTGCATCCTACTGCCCGG +
Preference number: 6 (lower is better)
Translates to: LSLCFPFQWTGN*HQPLGLHPTAR
Trigger: CCGGGCAGTAGGATGCAGCCCCAGAGGCTGGTGGCAGTTTCCTGTCCATTGAAAAGGAAAGCACAGGCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574393.1
ENST00000633170.1
CDS GCA 72 bp ACTGTGGCAAAAGGGATATGCACCGCCCGAGTCTTCTaGTCTTGGAGCCAGACACTGGACAGAAGCAAGTGC +
Preference number: 6 (lower is better)
Translates to: TVAKGICTARVF*SWSQTLDRSKC
Trigger: GCACTTGCTTCTGTCCAGTGTCTGGCTCCAAGAGCAGAAGACTCGGGCGGTGCATATCCCTTTTGCCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CAA 72 bp GTGACAAAGGTGTTCTCACACCCTCTTACCGTCACGTaGATCGTCTCGTACAGGCCCTGGGCTCTGGCTGTA +
Preference number: 6 (lower is better)
Translates to: VTKVFSHPLTVT*IVSYRPWALAV
Trigger: TACAGCCAGAGCCCAGGGCCTGTACGAGACGATCAACGTGACGGTAAGAGGGTGTGAGAACACCTTTGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CAA 72 bp AAGCCAGGGAATAGCCCCCAGATGGAGGAGAAAGCCTaGGCCCAAAATGCCCACCTCCTTCATGGAGGTTAC +
Preference number: 6 (lower is better)
Translates to: KPGNSPQMEEKA*AQNAHLLHGGY
Trigger: GTAACCTCCATGAAGGAGGTGGGCATTTTGGGCCAAGGCTTTCTCCTCCATCTGGGGGCTATTCCCTGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CAA 72 bp CTCATTCTTCCTGCTGCCATGTTAAGAAGGATGTGTTaGCTTCCCCTTCCGCCACGATCGCTGAGGCCTCCC +
Preference number: 6 (lower is better)
Translates to: LILPAAMLRRMC*LPLPPRSLRPP
Trigger: GGGAGGCCTCAGCGATCGTGGCGGAAGGGGAAGCAAACACATCCTTCTTAACATGGCAGCAGGAAGAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572139.5
ENST00000632045.1
CDS CCA 72 bp GTTCACCAACTCCCCCAATTCCCAGCATACGTTCTCTaGGAGCAGTGCCACAACCAGCTCTTCTCAGTCAGT +
Preference number: 6 (lower is better)
Translates to: VHQLPQFPAYVL*EQCHNQLFSVS
Trigger: ACTGACTGAGAAGAGCTGGTTGTGGCACTGCTCCCAGAGAACGTATGCTGGGAATTGGGGGAGTTGGTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CAA 90 bp TCCCGCCGTCGCGCATGCTGGGAAAATGTTTGTGTTGATCCTCGCTaGACCTCACAGGCACCCTGGATTCTTCACAGATTCACACTTCAC +
Preference number: 6 (lower is better)
Translates to: SRRRACWENVCVDPR*TSQAPWILHRFTLH
Trigger: GTGAAGTGTGAATCTGTGAAGAATCCAGGGTGCCTGTGAGGTCAAGCGAGGATCAACACAAACATTTTCCCAGCATGCGCGACGGCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS GCA 72 bp TTCCAAAAGTCTCACGAACTCTCCCGCCGTCGCGCATaGTGGGAAAATGTTTGTGTTGATCCTCGCTTGACC +
Preference number: 6 (lower is better)
Translates to: FQKSHELSRRRA*WENVCVDPRLT
Trigger: GGTCAAGCGAGGATCAACACAAACATTTTCCCAGCATGCGCGACGGCGGGAGAGTTCGTGAGACTTTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CCA 72 bp CAAAAGTCTCACGAACTCTCCCGCCGTCGCGCATGCTaGGAAAATGTTTGTGTTGATCCTCGCTTGACCTCA +
Preference number: 6 (lower is better)
Translates to: QKSHELSRRRAC*ENVCVDPRLTS
Trigger: TGAGGTCAAGCGAGGATCAACACAAACATTTTCCCAGCATGCGCGACGGCGGGAGAGTTCGTGAGACTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CCA 72 bp TCATCACTCAAAACCTACAGTGAAAGGCAGAGCCACTaGGCATCCCAGGTCTACCAAGGCCCAGGAATACAG +
Preference number: 6 (lower is better)
Translates to: SSLKTYSERQSH*ASQVYQGPGIQ
Trigger: CTGTATTCCTGGGCCTTGGTAGACCTGGGATGCCCAGTGGCTCTGCCTTTCACTGTAGGTTTTGAGTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS GCA 72 bp TCCTGCCTCAGCCTCCACAGTAGCTGGGTCTACAGGTaGACACCACCAGTCCTGGCAAATTGTTTTAAGTTT +
Preference number: 6 (lower is better)
Translates to: SCLSLHSSWVYR*TPPVLANCFKF
Trigger: AAACTTAAAACAATTTGCCAGGACTGGTGGTGTGCACCTGTAGACCCAGCTACTGTGGAGGCTGAGGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CAA 72 bp CGCGCATGCTGGGAAAATGTTTGTGTTGATCCTCGCTaGACCTCACAGGCACCCTGGATTCTTCACAGATTC +
Preference number: 6 (lower is better)
Translates to: RACWENVCVDPR*TSQAPWILHRF
Trigger: GAATCTGTGAAGAATCCAGGGTGCCTGTGAGGTCAAGCGAGGATCAACACAAACATTTTCCCAGCATGCGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS TCA 72 bp GCGCATGCTGGGAAAATGTTTGTGTTGATCCTCGCTTaGCCTCACAGGCACCCTGGATTCTTCACAGATTCA +
Preference number: 6 (lower is better)
Translates to: AHAGKMFVLILA*PHRHPGFFTDS
Trigger: TGAATCTGTGAAGAATCCAGGGTGCCTGTGAGGTCAAGCGAGGATCAACACAAACATTTTCCCAGCATGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS TCA 72 bp GATGAGATGACCAAACTGAATGCTAAGTGTAGGGCGTaGAGTGCTTCCAAAAGTCTCACGAACTCTCCCGCC +
Preference number: 6 (lower is better)
Translates to: DEMTKLNAKCRA*SASKSLTNSPA
Trigger: GGCGGGAGAGTTCGTGAGACTTTTGGAAGCACTTCACGCCCTACACTTAGCATTCAGTTTGGTCATCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CCA 72 bp TTCCCATGCGATTATAGACTCAAGGCCTGTGGCTTGTaGTCCACACTCAAGGAGCAGCCTAAAATTCCTCAT +
Preference number: 6 (lower is better)
Translates to: FPCDYRLKACGL*STLKEQPKIPH
Trigger: ATGAGGAATTTTAGGCTGCTCCTTGAGTGTGGACCACAAGCCACAGGCCTTGAGTCTATAATCGCATGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CAA 90 bp GTCCATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTGCAGCTaGATTGAATGTCAACTCCATGAAGTACTCATAGGCTTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: VHDVHGELLVDPLCS*IECQLHEVLIGFCQ
Trigger: CTGGCAGAAGCCTATGAGTACTTCATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574895.1
ENST00000633931.1
CDS TCA 72 bp CTGCTTCCCGGCCTAGTTTCCAGTGGATCTTTTTCCTaGGCCAAAGAGATAGGCTGTTACCTTATACTCAAC +
Preference number: 6 (lower is better)
Translates to: LLPGLVSSGSFS*AKEIGCYLILN
Trigger: GTTGAGTATAAGGTAACAGCCTATCTCTTTGGCTCAGGAAAAAGATCCACTGGAAACTAGGCCGGGAAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574393.1
ENST00000633170.1
CDS CCA 72 bp TTCGAGGCACTCCTAATATCTGATAATAATCTTCTTTaGCCAAAGGGGCACTCGTGTGGAAGGAGGCAGTAC +
Preference number: 6 (lower is better)
Translates to: FEALLISDNNLL*PKGHSCGRRQY
Trigger: GTACTGCCTCCTTCCACACGAGTGCCCCTTTGGCCAAAGAAGATTATTATCAGATATTAGGAGTGCCTCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000572009.1
ENST00000572139.5
ENST00000573120.5
ENST00000574895.1
ENST00000575106.5
ENST00000612103.4
ENST00000614397.4
ENST00000632045.1
ENST00000632459.1
ENST00000633082.1
ENST00000633240.1
ENST00000633931.1
CDS CAA 72 bp GTTCACGGTGAACTCCTTGTTGACCCCCTTTGCAGCTaGATTGAATGTCAACTCCATGAAGTACTCATAGGC +
Preference number: 6 (lower is better)
Translates to: VHGELLVDPLCS*IECQLHEVLIG
Trigger: GCCTATGAGTACTTCATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574895.1
ENST00000633931.1
CDS CAA 72 bp GGGAGAACTTCTCCTTGGCTTTGGGATCATCCTTATTaGTGTCAGGGTGATACTTCTTGGCAAGCTGTAAGG +
Preference number: 6 (lower is better)
Translates to: GRTSPWLWDHPY*CQGDTSWQAVR
Trigger: CCTTACAGCTTGCCAAGAAGTATCACCCTGACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570857.5
ENST00000631547.1
CDS TCA 72 bp GGTGATACTTCTTGGCAAGCTGATAATAGGCTTTCTTaGTCTCTTTCTGGCTGGCATTTCGAGGCACTCCTA +
Preference number: 6 (lower is better)
Translates to: GDTSWQADNRLS*SLSGWHFEALL
Trigger: TAGGAGTGCCTCGAAATGCCAGCCAGAAAGAGATCAAGAAAGCCTATTATCAGCTTGCCAAGAAGTATCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000262375.11
ENST00000355296.8
ENST00000572009.1
ENST00000572139.5
ENST00000573120.5
ENST00000574895.1
ENST00000575106.5
ENST00000612103.4
ENST00000614397.4
ENST00000632045.1
ENST00000632459.1
ENST00000633082.1
ENST00000633240.1
ENST00000633931.1
CDS GCA 72 bp CATGATGTTCACGGTGAACTCCTTGTTGACCCCCTTTaGAGCTTGATTGAATGTCAACTCCATGAAGTACTC +
Preference number: 6 (lower is better)
Translates to: HDVHGELLVDPL*SLIECQLHEVL
Trigger: GAGTACTTCATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAGGAGTTCACCGTGAACATCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574895.1
ENST00000633931.1
CDS TCA 72 bp CAGGTAGCAATGCAACCTTTGATTCATACACATAGCTaGACAGCAGTGACCGCATGCACCGAAGTCATATTA +
Preference number: 6 (lower is better)
Translates to: QVAMQPLIHTHS*TAVTACTEVIL
Trigger: TAATATGACTTCGGTGCATGCGGTCACTGCTGTTCAGCTATGTGTATGAATCAAAGGTTGCATTGCTACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573120.5
ENST00000632459.1
CDS TCA 72 bp AGAACACACAAACTTCTGCACTCCAGATCATCAACTTaGCCACACGACACTGAAAAATATGATACCGCCTGT +
Preference number: 6 (lower is better)
Translates to: RTHKLLHSRSST*PHDTEKYDTAC
Trigger: ACAGGCGGTATCATATTTTTCAGTGTCGTGTGGTCAAGTTGATGATCTGGAGTGCAGAAGTTTGTGTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS TCA 72 bp TTTCCATTTCAGAAAAAGAGCAATAAAGTACAGGGGTaGCAAAGGTGTTCTCACACCCTCTTACCGTCACGT +
Preference number: 6 (lower is better)
Translates to: FPFQKKSNKVQG*QRCSHTLLPSR
Trigger: ACGTGACGGTAAGAGGGTGTGAGAACACCTTTGTCACCCCTGTACTTTATTGCTCTTTTTCTGAAATGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577083.1
ENST00000633648.1
CDS CAA 90 bp GTGGAAGGAGGCAGTACAAATGAAAGGGTTATGTTTTGTTCCCTTTaGCTCATTCTTCCTGCTGCCATGTTAAGAAGGATGTGTTTGCTT +
Preference number: 6 (lower is better)
Translates to: VEGGSTNERVMFCSL*LILPAAMLRRMCLL
Trigger: AAGCAAACACATCCTTCTTAACATGGCAGCAGGAAGAATGAGCAAAAGGGAACAAAACATAACCCTTTCATTTGTACTGCCTCCTTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572139.5
ENST00000632045.1
CDS CAA 72 bp GGCAGTACAAATGAAAGGGTTATGTTTTGTTCCCTTTaGCTCATTCTTCCTGCTGCCATGTTAAGAAGGATG +
Preference number: 6 (lower is better)
Translates to: GSTNERVMFCSL*LILPAAMLRRM
Trigger: CATCCTTCTTAACATGGCAGCAGGAAGAATGAGCAAAAGGGAACAAAACATAACCCTTTCATTTGTACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572139.5
ENST00000632045.1