RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAI4 (Homo sapiens)

Ensembl gene IDs: ENSG00000152763

Ensembl transcript IDs: ENST00000371022.3, ENST00000371023.7, ENST00000371026.8, ENST00000464352.6, ENST00000469450.1, ENST00000488333.2, ENST00000491297.6, ENST00000493572.1, ENST00000531552.1, ENST00000531980.5, ENST00000532629.1

Found 380 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTTGGTTGTGTGGCATTGTTCCTGTGACCTGGAAGCCCCCTCCCTaGTTCAAGTTGTCCCTGCCTTTCTGGATGGAACCAATGTACTTC +
Preference number: 1 (lower is better)
Translates to: LWLCGIVPVTWKPPP*FKLSLPFWMEPMYF
Trigger: GAAGTACATTGGTTCCATCCAGAAAGGCAGGGACAACTTGAAGCAGGGAGGGGGCTTCCAGGTCACAGGAACAATGCCACACAACCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532629.1
3UTR CCA 90 bp CAGCAGCAGCAGAAGCAGCAGCTGAGCTCTAACACAAAGCGCCATTaGTTCCTCAGGCTGATGATTCAAAACAGTCACCCAGGGAACTTA +
Preference number: 1 (lower is better)
Translates to: QQQQKQQLSSNTKRH*FLRLMIQNSHPGNL
Trigger: TAAGTTCCCTGGGTGACTGTTTTGAATCATCAGCCTGAGGAACCAATGGCGCTTTGTGTTAGAGCTCAGCTGCTGCTTCTGCTGCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR TCA 90 bp CCAAATCTCCACCCTGTTCTCATTTGCAGCTGCAAATATATAGGATaGTTTTGGAGACCAGGCAACGTCGTAAACAACAGAAGTAGCTGG +
Preference number: 1 (lower is better)
Translates to: PNLHPVLICSCKYIG*FWRPGNVVNNRSSW
Trigger: CCAGCTACTTCTGTTGTTTACGACGTTGCCTGGTCTCCAAAATCATCCTATATATTTGCAGCTGCAAATGAGAACAGGGTGGAGATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR CCA 90 bp GGCCTTTGGTTAAGTCACAGGAAAAAGACCAAAGTCGTTCCAAGTTaGCGGGTATTGTTGATTCTTCTGCATGTATTTCTTCTTCCTCCT +
Preference number: 1 (lower is better)
Translates to: GLWLSHRKKTKVVPS*RVLLILLHVFLLPP
Trigger: AGGAGGAAGAAGAAATACATGCAGAAGAATCAACAATACCCGCCAACTTGGAACGACTTTGGTCTTTTTCCTGTGACTTAACCAAAGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR TCA 90 bp GATTTTGGCTATGCAATGTGCTCAGGGTTGTTAATTTGTACACAGTaGGAGGTGGTAAGTATAGTAGTTAAGTGCACAAGCTCTAGAACC +
Preference number: 1 (lower is better)
Translates to: DFGYAMCSGLLICTQ*EVVSIVVKCTSSRT
Trigger: GGTTCTAGAGCTTGTGCACTTAACTACTATACTTACCACCTCTCACTGTGTACAAATTAACAACCCTGAGCACATTGCATAGCCAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371022.3
3UTR CCA 90 bp TCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTaGCCTCAGTTTAACCCAGGATTTGTTAAAACAAACTGCATAGAA +
Preference number: 1 (lower is better)
Translates to: SSPLRMLYRTAHHVL*PQFNPGFVKTNCIE
Trigger: TTCTATGCAGTTTGTTTTAACAAATCCTGGGTTAAACTGAGGCCACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
3UTR CCA 90 bp TTTTGTTTAAGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATaGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATTCCAGT +
Preference number: 1 (lower is better)
Translates to: FCLRDWSKQMEFMKQ*ILVKGSSHCCTDSS
Trigger: ACTGGAATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCTTAAACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
3UTR GCA 90 bp GTTCATTATATGAACAAGAACATTTGTGAATATGACCTTCTTCAGTaGCAGCCAAATAGATATTTGTGTCCTTGGGATGAAAAGCAAAAC +
Preference number: 1 (lower is better)
Translates to: VHYMNKNICEYDLLQ*QPNRYLCPWDEKQN
Trigger: GTTTTGCTTTTCATCCCAAGGACACAAATATCTATTTGGCTGGCACTGAAGAAGGTCATATTCACAAATGTTCTTGTTCATATAATGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR TCA 90 bp ACTGTCTCCTACCAGAAGGCAATCTGTTTGTTTGGCAAAGAGAATGGTTGTGAAAGGTACTTCAGAGGCTaGGGTGGGAGGATCGCTGGA +
Preference number: 2 (lower is better)
Translates to: TVSYQKAICLFGKENGCERYFRG*GGRIAG
Trigger: TCCAGCGATCCTCCCACCTCAGCCTCTGAAGTACCT...TTCACAACCATTCTCTTTGCCAAACAAACAGATTGCCTTCTGGTAGGAGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR GCA 90 bp AATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCATTTGGAGGAGTCACTaGTCCCCATCTCCACCCCGA +
Preference number: 2 (lower is better)
Translates to: NFICPIVSSPLRMLYRTAIWRSH*SPSPPR
Trigger: TCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAAT...GGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
3UTR-3UTR GCA 90 bp AATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCATGGTGGCGGACACCTaGAATCCCAGCTACTTGGGA +
Preference number: 2 (lower is better)
Translates to: NFICPIVSSPLRMLYRTAMVADT*NPSYLG
Trigger: TCCCAAGTAGCTGGGATTGCAGGTGTCCGCCACCAT...GGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR CAA 90 bp TCTGGATTTGTTTTATTCCAGGCAAGGCTGCTCACATTGAGGCCTTaGGTTAAGTCACAGGAAAAAGACCAAAGTCGTTCCAAGTTGGCG +
Preference number: 2 (lower is better)
Translates to: SGFVLFQARLLTLRP*VKSQEKDQSRSKLA
Trigger: CGCCAACTTGGAACGACTTTGGTCTTTTTCCTGTGACTTAACCAAAGGCCTCAATGTGAGCAGCCTTGCCTGGAATAAAACAAATCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR GCA 90 bp AGGCATATTTCTCAGTTCATACACAGAAACCTGTCCATCACTGTCTCCTACCAGGGTAGTTCCCACTGTTaGACTGATTCCAGTCTTGGT +
Preference number: 2 (lower is better)
Translates to: RHISQFIHRNLSITVSYQGSSHC*TDSSLG
Trigger: ACCAAGACTGGAATCAGTGCAACAGTGGGAACTACC...CTGGTAGGAGACAGTGATGGACAGGTTTCTGTGTATGAACTGAGAAATATGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CCA 90 bp ACCAGTAAGTGGATCTGGATGGTAAAGAGGTCGGGGAGTAACATCAGTTCCATTACTTCTTTGGTTGTGTaGCATTGTTCCTGTGACCTG +
Preference number: 2 (lower is better)
Translates to: TSKWIWMVKRSGSNISSITSLVV*HCSCDL
Trigger: CAGGTCACAGGAACAATGCCACACAACCAAAGAAGT...AATGGAACTGATGTTACTCCCCGACCTCTTTACCATCCAGATCCACTTACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532629.1
3UTR-3UTR TCA 90 bp ACTGTCTCCTACCAGAAGGCAATCTGTTTGTTTGGCAAAGAGAATGGTTGTGAATCTATCTGGGTCCACTaGAGTCTGGGCTTAAAATCC +
Preference number: 2 (lower is better)
Translates to: TVSYQKAICLFGKENGCESIWVH*SLGLKS
Trigger: GGATTTTAAGCCCAGACTTCAGTGGACCCAGATAGA...TTCACAACCATTCTCTTTGCCAAACAAACAGATTGCCTTCTGGTAGGAGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR GCA 90 bp ACCAGTAAGTGGATCTGGATGGTAAAGAGGTCGGGGAGTAACATCAGTTCCATTTGGACACAGCCATTCTaGTTTGATTTGCACCAGTAT +
Preference number: 2 (lower is better)
Translates to: TSKWIWMVKRSGSNISSIWTQPF*FDLHQY
Trigger: ATACTGGTGCAAATCAAAGCAGAATGGCTGTGTCCA...AATGGAACTGATGTTACTCCCCGACCTCTTTACCATCCAGATCCACTTACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532629.1
3UTR-3UTR CCA 90 bp CTGTTAGCAATGAATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTTTTTTCTCACTGAATTaGGAATGTGATAAGCGCTGG +
Preference number: 2 (lower is better)
Translates to: LLAMNIWRSHCSPSPPRFFFSLN*ECDKRW
Trigger: CCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAA...AAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATATTCATTGCTAACAG
44% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
3UTR-3UTR CCA 90 bp TGTACCAGTAAGTGGATCTGGATGGTAAAGAGGTCGGGGAGTAACATCAGTTCCAGTTTTCAGTTCAGGTaGAATAAGCACGGTTTTGGA +
Preference number: 2 (lower is better)
Translates to: CTSKWIWMVKRSGSNISSSFQFR*NKHGFG
Trigger: TCCAAAACCGTGCTTATTCCACCTGAACTGAAAACT...GGAACTGATGTTACTCCCCGACCTCTTTACCATCCAGATCCACTTACTGGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532629.1
3UTR CAA 90 bp AGGCCTTTGGTTAAGTCACAGGAAAAAGACCAAAGTCGTTCCAAGTaGGCGGGTATTGTTGATTCTTCTGCATGTATTTCTTCTTCCTCC +
Preference number: 2 (lower is better)
Translates to: RPLVKSQEKDQSRSK*AGIVDSSACISSSS
Trigger: GGAGGAAGAAGAAATACATGCAGAAGAATCAACAATACCCGCCAACTTGGAACGACTTTGGTCTTTTTCCTGTGACTTAACCAAAGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR CAA 90 bp ACCAGAAGGCAATCTGTTTGTTTGGCAAAGAGAATGGTTGTGAACTaGATTCCAGGGTTAGCAGTATTCACAATCAGAGGGTCCAAAGTG +
Preference number: 2 (lower is better)
Translates to: TRRQSVCLAKRMVVN*IPGLAVFTIRGSKV
Trigger: CACTTTGGACCCTCTGATTGTGAATACTGCTAACCCTGGAATCAAGTTCACAACCATTCTCTTTGCCAAACAAACAGATTGCCTTCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CCA 90 bp TTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTGGCCTCAGTTTAACCCAGTTAGCAATGAATATTTaGAGGAGTCACTGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: LECFIEQPIMSCGLSLTQLAMNI*RSHCSP
Trigger: TGGGGAGCAGTGACTCCTCCAAATATTCATTGCTAA...CTGGGTTAAACTGAGGCCACAGGACATGATGGGCTGTTCTATAAAGCATTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
3UTR-3UTR CCA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTGCCCATCATGTCCTGTaGCCTCAGTTTAACCCAGGA +
Preference number: 2 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGAHHVL*PQFNPG
Trigger: TCCTGGGTTAAACTGAGGCCACAGGACATGATGGGC...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
3UTR-3UTR TCA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATTCTATCTGGGTCCACTaGAGTCTGGGCTTAAAATCC +
Preference number: 2 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDSIWVH*SLGLKS
Trigger: GGATTTTAAGCCCAGACTTCAGTGGACCCAGATAGA...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
3UTR-3UTR TCA 90 bp AAGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGGTCTGGGTGACAGAGTaGGATCCTGAGAAGAAGAAG +
Preference number: 2 (lower is better)
Translates to: KGLVQTNGVYEAMDTCKRVWVTE*DPEKKK
Trigger: CTTCTTCTTCTCAGGATCTCACTCTGTCACCCAGAC...CCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR GCA 90 bp CTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTCGATTTCCGCAACCTTaGTCTAGAACTCTTCATAAA +
Preference number: 2 (lower is better)
Translates to: LSSPLHLECFIEQPIMSCRFPQP*SRTLHK
Trigger: TTTATGAAGAGTTCTAGAGCAAGGTTGCGGAAATCG...ACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
3UTR-3UTR GCA 90 bp AGGCATATTTCTCAGTTCATACACAGAAACCTGTCCATCACTGTCTCCTACCAGCTAGTATTTCTCTTTTaGCATCTCCTGTTGTTCCTC +
Preference number: 2 (lower is better)
Translates to: RHISQFIHRNLSITVSYQLVFLF*HLLLFL
Trigger: GAGGAACAACAGGAGATGGCAAAAGAGAAATACTAG...CTGGTAGGAGACAGTGATGGACAGGTTTCTGTGTATGAACTGAGAAATATGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR GCA 90 bp ATGCTGATTGGTTTGACTTGGATCCAAGCAAAGTATCCATTATATCTCCCCGGCCACCCTGTTCTCATTTaGAGCTGCAAATATATAGGA +
Preference number: 2 (lower is better)
Translates to: MLIGLTWIQAKYPLYLPGHPVLI*SCKYIG
Trigger: TCCTATATATTTGCAGCTGCAAATGAGAACAGGGTG...GCCGGGGAGATATAATGGATACTTTGCTTGGATCCAAGTCAAACCAATCAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CCA 90 bp ATCTGGATGGTAAAGAGGTCGGGGAGTAACATCAGTTCCATTTATGTCAAATACTTGTCCCTGCCTTTCTaGATGGAACCAATGTACTTC +
Preference number: 2 (lower is better)
Translates to: IWMVKRSGSNISSIYVKYLSLPF*MEPMYF
Trigger: GAAGTACATTGGTTCCATCCAGAAAGGCAGGGACAA...GTATTTGACATAAATGGAACTGATGTTACTCCCCGACCTCTTTACCATCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532629.1
3UTR-3UTR GCA 90 bp TTGAGGCCTTTGGTTAAGTCACAGGAAAAAGACCAAAGTCGTTCCAAGTTGGCGTTTGTTAAAACAAACTaGATAGAATGGCCTGTTAGC +
Preference number: 2 (lower is better)
Translates to: LRPLVKSQEKDQSRSKLAFVKTN*IEWPVS
Trigger: GCTAACAGGCCATTCTATGCAGTTTGTTTTAACAAA...CGCCAACTTGGAACGACTTTGGTCTTTTTCCTGTGACTTAACCAAAGGCCTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CCA 90 bp AGGCATATTTCTCAGTTCATACACAGAAACCTGTCCATCACTGTCTCCTACCAGGAATGTGATAAGCGCTaGTCAAACCATAAAATTCTG +
Preference number: 2 (lower is better)
Translates to: RHISQFIHRNLSITVSYQECDKR*SNHKIL
Trigger: CAGAATTTTATGGTTTGACCAGCGCTTATCACATTC...CTGGTAGGAGACAGTGATGGACAGGTTTCTGTGTATGAACTGAGAAATATGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CCA 90 bp AATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCTTAGCAATGAATATTTaGAGGAGTCACTGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: NFICPIVSSPLRMLYRTALAMNI*RSHCSP
Trigger: TGGGGAGCAGTGACTCCTCCAAATATTCATTGCTAA...GGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
3UTR-3UTR TCA 90 bp TTAGTGAATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAGGCAGGCAAATCATTTaGGGTCAGAAGTTTGAAACC +
Preference number: 2 (lower is better)
Translates to: LVNFICPIVSSPLRMLYRGRQII*GQKFET
Trigger: GGTTTCAAACTTCTGACCTCAAATGATTTGCCTGCC...TCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATTCACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR TCA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATGGTCCCAAATGTTTTTaGGGTGATTCACATGGGATT +
Preference number: 2 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDGPKCF*GDSHGI
Trigger: AATCCCATGTGAATCACCTCAAAAACATTTGGGACC...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR GCA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATCCTCTCCACTTAGAATaGTTTATAGAACAGCCCATC +
Preference number: 2 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDPLHLE*FIEQPI
Trigger: GATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGG...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
3UTR-3UTR GCA 90 bp ACTGTCTCCTACCAGAAGGCAATCTGTTTGTTTGGCAAAGAGAATGGTTGTGAAGCTCCATTGAAAGTCTaGATCATCCTTTCAACATAT +
Preference number: 2 (lower is better)
Translates to: TVSYQKAICLFGKENGCEAPLKV*IILSTY
Trigger: ATATGTTGAAAGGATGATGCAGACTTTCAATGGAGC...TTCACAACCATTCTCTTTGCCAAACAAACAGATTGCCTTCTGGTAGGAGACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CCA 90 bp AACAGAAGTAGCTGGATAAAAACTCAAAGATGGCTTGACATTCTCCTGTTGCCATTTTTCTCACTGAATTaGGAATGTGATAAGCGCTGG +
Preference number: 2 (lower is better)
Translates to: NRSSWIKTQRWLDILLLPFFSLN*ECDKRW
Trigger: CCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAA...TGGCAACAGGAGAATGTCAAGCCATCTTTGAGTTTTTATCCAGCTACTTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CCA 90 bp TCACAGGAAAAAGACCAAAGTCGTTCCAAGTTGGCGGGTATTGTTGATTCTTCTAATAACATCCTGATGTaGCCTATAGATCAGAGACTT +
Preference number: 2 (lower is better)
Translates to: SQEKDQSRSKLAGIVDSSNNILM*PIDQRL
Trigger: AAGTCTCTGATCTATAGGCCACATCAGGATGTTATT...AGAAGAATCAACAATACCCGCCAACTTGGAACGACTTTGGTCTTTTTCCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CCA 90 bp AAGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGAACACAAAGCGCCATTaGTTCCTCAGGCTGATGATT +
Preference number: 2 (lower is better)
Translates to: KGLVQTNGVYEAMDTCKRNTKRH*FLRLMI
Trigger: AATCATCAGCCTGAGGAACCAATGGCGCTTTGTGTT...CCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CCA 90 bp ATGCTGATTGGTTTGACTTGGATCCAAGCAAAGTATCCATTATATCTCCCCGGCTCTTCCTCATCTTCATaGATTTTTGCCAGAATTACA +
Preference number: 2 (lower is better)
Translates to: MLIGLTWIQAKYPLYLPGSSSSS*IFARIT
Trigger: TGTAATTCTGGCAAAAATCCATGAAGATGAGGAAGA...GCCGGGGAGATATAATGGATACTTTGCTTGGATCCAAGTCAAACCAATCAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CCA 90 bp ATGCTGATTGGTTTGACTTGGATCCAAGCAAAGTATCCATTATATCTCCCCGGCGATAAGCTGCAAGTTTaGGCTGAAATATATTTTCCA +
Preference number: 2 (lower is better)
Translates to: MLIGLTWIQAKYPLYLPGDKLQV*AEIYFP
Trigger: TGGAAAATATATTTCAGCCCAAACTTGCAGCTTATC...GCCGGGGAGATATAATGGATACTTTGCTTGGATCCAAGTCAAACCAATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CCA 90 bp AACAGAAGTAGCTGGATAAAAACTCAAAGATGGCTTGACATTCTCCTGTTGCCAAAAGTCGTTCCAAGTTaGCGGGTATTGTTGATTCTT +
Preference number: 2 (lower is better)
Translates to: NRSSWIKTQRWLDILLLPKVVPS*RVLLIL
Trigger: AAGAATCAACAATACCCGCCAACTTGGAACGACTTT...TGGCAACAGGAGAATGTCAAGCCATCTTTGAGTTTTTATCCAGCTACTTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR TCA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTTTCCCACTGTTGCACTaGTTCCAGTCTTGGTTTTTA +
Preference number: 2 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGFPLLH*FQSWFL
Trigger: TAAAAACCAAGACTGGAATCAGTGCAACAGTGGGAA...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
3UTR-3UTR GCA 90 bp TTATTCTTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATATAGGTCAACTGACCTTGTAAACTaGCCTAACGTACTAGGATTT +
Preference number: 2 (lower is better)
Translates to: LFFGAPLKVCIILSTYRSTDLVN*PNVLGF
Trigger: AAATCCTAGTACGTTAGGGCAGTTTACAAGGTCAGT...TGACCTATATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531980.5
3UTR-3UTR CCA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATGAATGTGATAAGCGCTaGTCAAACCATAAAATTCTG +
Preference number: 2 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDECDKR*SNHKIL
Trigger: CAGAATTTTATGGTTTGACCAGCGCTTATCACATTC...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
3UTR-3UTR CCA 90 bp AACAGAAGTAGCTGGATAAAAACTCAAAGATGGCTTGACATTCTCCTGTTGCCAACAAACTGCATAGAATaGCCTGTTAGCAATGAATAT +
Preference number: 2 (lower is better)
Translates to: NRSSWIKTQRWLDILLLPTNCIE*PVSNEY
Trigger: ATATTCATTGCTAACAGGCCATTCTATGCAGTTTGT...TGGCAACAGGAGAATGTCAAGCCATCTTTGAGTTTTTATCCAGCTACTTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CCA 90 bp AACAGAAGTAGCTGGATAAAAACTCAAAGATGGCTTGACATTCTCCTGTTGCCAAACATCTTTATTCTTTaGTGCTCCATTGAAAGTCTG +
Preference number: 2 (lower is better)
Translates to: NRSSWIKTQRWLDILLLPNIFIL*CSIESL
Trigger: CAGACTTTCAATGGAGCACCAAAGAATAAAGATGTT...TGGCAACAGGAGAATGTCAAGCCATCTTTGAGTTTTTATCCAGCTACTTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR GCA 90 bp AAGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTATGACCTTCTTCAGTaGCAGCCAAATAGATATTTG +
Preference number: 2 (lower is better)
Translates to: KGLVQTNGVYEAMDTCKRYDLLQ*QPNRYL
Trigger: CAAATATCTATTTGGCTGGCACTGAAGAAGGTCATA...CCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR TCA 72 bp AGCAGCAGCAGCAACAGCAGCAGCAGAAGCAGCAGCTaGGCTCTAACACAAAGCGCCATTGGTTCCTCAGGC +
Preference number: 3 (lower is better)
Translates to: SSSSNSSSRSSS*ALTQSAIGSSG
Trigger: GCCTGAGGAACCAATGGCGCTTTGTGTTAGAGCTCAGCTGCTGCTTCTGCTGCTGCTGTTGCTGCTGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR GCA 72 bp TGTGGCATTGTTCCTGTGACCTGGAAGCCCCCTCCCTaGTTCAAGTTGTCCCTGCCTTTCTGGATGGAACCA +
Preference number: 3 (lower is better)
Translates to: CGIVPVTWKPPP*FKLSLPFWMEP
Trigger: TGGTTCCATCCAGAAAGGCAGGGACAACTTGAAGCAGGGAGGGGGCTTCCAGGTCACAGGAACAATGCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532629.1
3UTR TCA 72 bp CTAATAGACTTCTTTGGTTGTGTGGCATTGTTCCTGTaGCCTGGAAGCCCCCTCCCTGCTTCAAGTTGTCCC +
Preference number: 3 (lower is better)
Translates to: LIDFFGCVALFL*PGSPLPASSCP
Trigger: GGGACAACTTGAAGCAGGGAGGGGGCTTCCAGGTCACAGGAACAATGCCACACAACCAAAGAAGTCTATTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532629.1
3UTR GCA 72 bp AATGGCCTGTTAGCAATGAATATTTGGAGGAGTCACTaGTCCCCATCTCCACCCCGATTTCCGCAACCTTGC +
Preference number: 3 (lower is better)
Translates to: NGLLAMNIWRSH*SPSPPRFPQPC
Trigger: GCAAGGTTGCGGAAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATATTCATTGCTAACAGGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
3UTR-3UTR CAA 90 bp TTGAGGCCTTTGGTTAAGTCACAGGAAAAAGACCAAAGTCGTTCCAAGTTGGCGAGAGAGGAGAATTGCTaGAACCCAGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: LRPLVKSQEKDQSRSKLAREENC*NPGGGG
Trigger: ACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTCTCT...CGCCAACTTGGAACGACTTTGGTCTTTTTCCTGTGACTTAACCAAAGGCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR TCA 72 bp CTGGGTCCACTGAAGTCTGGGCTTAAAATCCAGAGCTaGTTCTGGGCAAACAGAGAAGAGTACCCTGTTGTG +
Preference number: 3 (lower is better)
Translates to: LGPLKSGLKIQS*FWANREEYPVV
Trigger: CACAACAGGGTACTCTTCTCTGTTTGCCCAGAATCAGCTCTGGATTTTAAGCCCAGACTTCAGTGGACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
3UTR CCA 72 bp CAGAAGCAGCAGCTGAGCTCTAACACAAAGCGCCATTaGTTCCTCAGGCTGATGATTCAAAACAGTCACCCA +
Preference number: 3 (lower is better)
Translates to: QKQQLSSNTKRH*FLRLMIQNSHP
Trigger: TGGGTGACTGTTTTGAATCATCAGCCTGAGGAACCAATGGCGCTTTGTGTTAGAGCTCAGCTGCTGCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CAA 90 bp GCAAGGCTGCTCACATTGAGGCCTTTGGTTAAGTCACAGGAAAAAGACCAAAGTCCCCTGGTAATTCTCTaGAAGCGACTTCACAAGCCA +
Preference number: 3 (lower is better)
Translates to: ARLLTLRPLVKSQEKDQSPLVIL*KRLHKP
Trigger: TGGCTTGTGAAGTCGCTTCAAGAGAATTACCAGGGG...ACTTTGGTCTTTTTCCTGTGACTTAACCAAAGGCCTCAATGTGAGCAGCCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CAA 90 bp ACTGTCTCCTACCAGAAGGCAATCTGTTTGTTTGGCAAAGAGAATGGTTGTGAATGCAGTGAGCCAAGATaGCACTCCAGTCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: TVSYQKAICLFGKENGCECSEPR*HSSLGD
Trigger: GTCACCCAGACTGGAGTGCAATCTTGGCTCACTGCA...TTCACAACCATTCTCTTTGCCAAACAAACAGATTGCCTTCTGGTAGGAGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CAA 90 bp GCAAGGCTGCTCACATTGAGGCCTTTGGTTAAGTCACAGGAAAAAGACCAAAGTGTTAGCAATGAATATTaGGAGGAGTCACTGCTCCCC +
Preference number: 3 (lower is better)
Translates to: ARLLTLRPLVKSQEKDQSVSNEY*EESLLP
Trigger: GGGGAGCAGTGACTCCTCCAAATATTCATTGCTAAC...ACTTTGGTCTTTTTCCTGTGACTTAACCAAAGGCCTCAATGTGAGCAGCCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR GCA 72 bp ATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATaGTTTATAGAACAGCCCATCATGTCCTGTGGCCTC +
Preference number: 3 (lower is better)
Translates to: ISYALSSPLHLE*FIEQPIMSCGL
Trigger: GAGGCCACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
3UTR CCA 72 bp GAGTTTACTTGGTTTTGCTGTACCAGTAAGTGGATCTaGATGGTAAAGAGGTCGGGGAGTAACATCAGTTCC +
Preference number: 3 (lower is better)
Translates to: EFTWFCCTSKWI*MVKRSGSNISS
Trigger: GGAACTGATGTTACTCCCCGACCTCTTTACCATCCAGATCCACTTACTGGTACAGCAAAACCAAGTAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532629.1
3UTR CCA 72 bp TGTCAAGAGTTTACTTGGTTTTGCTGTACCAGTAAGTaGATCTGGATGGTAAAGAGGTCGGGGAGTAACATC +
Preference number: 3 (lower is better)
Translates to: CQEFTWFCCTSK*IWMVKRSGSNI
Trigger: GATGTTACTCCCCGACCTCTTTACCATCCAGATCCACTTACTGGTACAGCAAAACCAAGTAAACTCTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532629.1
3UTR-3UTR CAA 90 bp AGTAAGTGGATCTGGATGGTAAAGAGGTCGGGGAGTAACATCAGTTCCATTTATCACAGCCATTCTGCTTaGATTTGCACCAGTATATCC +
Preference number: 3 (lower is better)
Translates to: SKWIWMVKRSGSNISSIYHSHSA*ICTSIS
Trigger: GGATATACTGGTGCAAATCAAAGCAGAATGGCTGTG...ATAAATGGAACTGATGTTACTCCCCGACCTCTTTACCATCCAGATCCACTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532629.1
3UTR TCA 72 bp CTGGATTTGTTTTATTCCAGGCAAGGCTGCTCACATTaGGGCCTTTGGTTAAGTCACAGGAAAAAGACCAAA +
Preference number: 3 (lower is better)
Translates to: LDLFYSRQGCSH*GLWLSHRKKTK
Trigger: TTTGGTCTTTTTCCTGTGACTTAACCAAAGGCCTCAATGTGAGCAGCCTTGCCTGGAATAAAACAAATCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR TCA 72 bp CACCCTGTTCTCATTTGCAGCTGCAAATATATAGGATaGTTTTGGAGACCAGGCAACGTCGTAAACAACAGA +
Preference number: 3 (lower is better)
Translates to: HPVLICSCKYIG*FWRPGNVVNNR
Trigger: TCTGTTGTTTACGACGTTGCCTGGTCTCCAAAATCATCCTATATATTTGCAGCTGCAAATGAGAACAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CAA 90 bp ACTGTCTCCTACCAGAAGGCAATCTGTTTGTTTGGCAAAGAGAATGGTTGTGAATTCTTTGGTGCTCCATaGAAAGTCTGCATCATCCTT +
Preference number: 3 (lower is better)
Translates to: TVSYQKAICLFGKENGCEFFGAP*KVCIIL
Trigger: AAGGATGATGCAGACTTTCAATGGAGCACCAAAGAA...TTCACAACCATTCTCTTTGCCAAACAAACAGATTGCCTTCTGGTAGGAGACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CAA 90 bp TTAGTGAATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAGTTAGCAATGAATATTaGGAGGAGTCACTGCTCCCC +
Preference number: 3 (lower is better)
Translates to: LVNFICPIVSSPLRMLYRVSNEY*EESLLP
Trigger: GGGGAGCAGTGACTCCTCCAAATATTCATTGCTAAC...TCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
3UTR-3UTR CAA 90 bp AGGCATATTTCTCAGTTCATACACAGAAACCTGTCCATCACTGTCTCCTACCAGCTTTTGTTTAAGGGATaGGTCCAAACAAATGGAGTT +
Preference number: 3 (lower is better)
Translates to: RHISQFIHRNLSITVSYQLLFKG*VQTNGV
Trigger: AACTCCATTTGTTTGGACCAATCCCTTAAACAAAAG...CTGGTAGGAGACAGTGATGGACAGGTTTCTGTGTATGAACTGAGAAATATGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CAA 90 bp AGGCATATTTCTCAGTTCATACACAGAAACCTGTCCATCACTGTCTCCTACCAGTGTCAGATTTTAATATaGCATCTGAGTGGTCTTCCT +
Preference number: 3 (lower is better)
Translates to: RHISQFIHRNLSITVSYQCQILI*HLSGLP
Trigger: AGGAAGACCACTCAGATGCAATATTAAAATCTGACA...CTGGTAGGAGACAGTGATGGACAGGTTTCTGTGTATGAACTGAGAAATATGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CAA 90 bp TCACAGGAAAAAGACCAAAGTCGTTCCAAGTTGGCGGGTATTGTTGATTCTTCTAAATTTGCCTTGCTTTaGTTTAAGGGATTGGTCCAA +
Preference number: 3 (lower is better)
Translates to: SQEKDQSRSKLAGIVDSSKFALL*FKGLVQ
Trigger: TTGGACCAATCCCTTAAACAAAAGCAAGGCAAATTT...AGAAGAATCAACAATACCCGCCAACTTGGAACGACTTTGGTCTTTTTCCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR-3UTR CAA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATCTTGACATTCTCCTGTaGCCATATAATAACACCCCA +
Preference number: 3 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDLDILL*PYNNTP
Trigger: TGGGGTGTTATTATATGGCAACAGGAGAATGTCAAG...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR TCA 72 bp TATGCAATGTGCTCAGGGTTGTTAATTTGTACACAGTaGGAGGTGGTAAGTATAGTAGTTAAGTGCACAAGC +
Preference number: 3 (lower is better)
Translates to: YAMCSGLLICTQ*EVVSIVVKCTS
Trigger: GCTTGTGCACTTAACTACTATACTTACCACCTCTCACTGTGTACAAATTAACAACCCTGAGCACATTGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371022.3
3UTR CCA 72 bp CTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTaGCCTCAGTTTAACCCAGGATTTGTTAAAACAAAC +
Preference number: 3 (lower is better)
Translates to: LRMLYRTAHHVL*PQFNPGFVKTN
Trigger: GTTTGTTTTAACAAATCCTGGGTTAAACTGAGGCCACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
3UTR CCA 72 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATaGATACTTGTAAAAGGTAGTTCCCACTGTTGCACT +
Preference number: 3 (lower is better)
Translates to: RDWSKQMEFMKQ*ILVKGSSHCCT
Trigger: AGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
3UTR-3UTR CAA 90 bp AAGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGAGAATGGTTGTGAACTaGATTCCAGGGTTAGCAGTA +
Preference number: 3 (lower is better)
Translates to: KGLVQTNGVYEAMDTCKRRMVVN*IPGLAV
Trigger: TACTGCTAACCCTGGAATCAAGTTCACAACCATTCT...CCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CCA 90 bp CCCCCTCCCTGCTTCAAGTTGTCCCTGCCTTTCTGGATGGAACCAATGTACTTCATGGTGGCGACCAGCTaGGGAGTGGTGCACCACCCC +
Preference number: 4 (lower is better)
Translates to: PPPCFKLSLPFWMEPMYFMVATS*GVVHHP
Trigger: GGGGTGGTGCACCACTCCCCAGCTGGTCGCCACCAT...GAAGTACATTGGTTCCATCCAGAAAGGCAGGGACAACTTGAAGCAGGGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR GCA 90 bp ATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTCCGCAACCTTGCTAGGCTCCGGAATGTTTaGCGGGCGTCATGGCGACGG +
Preference number: 4 (lower is better)
Translates to: IFGGVTAPHLHPDFRNLARLRNV*RASWRR
Trigger: CCGTCGCCATGACGCCCGGCAAACATTCCGGAGCCT...AGCAAGGTTGCGGAAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR TCA 90 bp CCCCCTCCCTGCTTCAAGTTGTCCCTGCCTTTCTGGATGGAACCAATGTACTTCGTGGCATTGTTCCTGTaGCCTGGAAGCCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PPPCFKLSLPFWMEPMYFVALFL*PGSPLP
Trigger: AGGGAGGGGGCTTCCAGGTCACAGGAACAATGCCAC...GAAGTACATTGGTTCCATCCAGAAAGGCAGGGACAACTTGAAGCAGGGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR CCA 90 bp TGTACCAGTAAGTGGATCTGGATGGTAAAGAGGTCGGGGAGTAACATCAGTTCCCCGGAGAGACTGGCATaGTGGCGACCAGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: CTSKWIWMVKRSGSNISSPERLA*WRPAGE
Trigger: CTCCCCAGCTGGTCGCCACCATGCCAGTCTCTCCGG...GGAACTGATGTTACTCCCCGACCTCTTTACCATCCAGATCCACTTACTGGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR GCA 90 bp ATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTCCGCAACCTTGCTATTTGGAGGAGTCACTaGTCCCCATCTCCACCCCGA +
Preference number: 4 (lower is better)
Translates to: IFGGVTAPHLHPDFRNLAIWRSH*SPSPPR
Trigger: TCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAAT...AGCAAGGTTGCGGAAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp TTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTGGCCTCAGTTTAACCCAGGTTTGCCGGGCGTCATaGCGACGGTGGAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LECFIEQPIMSCGLSLTQVCRAS*RRWSPG
Trigger: GCCAGGGCTCCACCGTCGCCATGACGCCCGGCAAAC...CTGGGTTAAACTGAGGCCACAGGACATGATGGGCTGTTCTATAAAGCATTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371026.8
3UTR CAA 72 bp GTTCCTGTGACCTGGAAGCCCCCTCCCTGCTTCAAGTaGTCCCTGCCTTTCTGGATGGAACCAATGTACTTC +
Preference number: 4 (lower is better)
Translates to: VPVTWKPPPCFK*SLPFWMEPMYF
Trigger: GAAGTACATTGGTTCCATCCAGAAAGGCAGGGACAACTTGAAGCAGGGAGGGGGCTTCCAGGTCACAGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR CCA 90 bp TTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTGGCCTCAGTTTAACCCAGCCGGAGAGACTGGCATaGTGGCGACCAGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LECFIEQPIMSCGLSLTQPERLA*WRPAGE
Trigger: CTCCCCAGCTGGTCGCCACCATGCCAGTCTCTCCGG...CTGGGTTAAACTGAGGCCACAGGACATGATGGGCTGTTCTATAAAGCATTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR CCA 90 bp TGGTTGTGTGGCATTGTTCCTGTGACCTGGAAGCCCCCTCCCTGCTTCAAGTTGACCAGTAAGTGGATCTaGATGGTAAAGAGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: WLCGIVPVTWKPPPCFKLTSKWI*MVKRSG
Trigger: CCCCGACCTCTTTACCATCCAGATCCACTTACTGGT...CAACTTGAAGCAGGGAGGGGGCTTCCAGGTCACAGGAACAATGCCACACAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR CCA 90 bp GTTAAGTGCACAAGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTATGGTGGCGACCAGCTaGGGAGTGGTGCACCACCCC +
Preference number: 4 (lower is better)
Translates to: VKCTSSRTRTVSKLLFACMVATS*GVVHHP
Trigger: GGGGTGGTGCACCACTCCCCAGCTGGTCGCCACCAT...ACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCTTGTGCACTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CCA 90 bp CAAGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTTTCCTCATCTGCCTGCCGGAGAGACTaGCATGGTGGCGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: QALEPEQLANFSLPVSSSACRRD*HGGDQL
Trigger: CAGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGC...AGATGAGGAAACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CCA 90 bp CTGCTTCAAGTTGTCCCTGCCTTTCTGGATGGAACCAATGTACTTCTTACATATGCCTGCCGGAGAGACTaGCATGGTGGCGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: LLQVVPAFLDGTNVLLTYACRRD*HGGDQL
Trigger: CAGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGC...ATATGTAAGAAGTACATTGGTTCCATCCAGAAAGGCAGGGACAACTTGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR CCA 90 bp ATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTCCGCAACCTTGCTACCAGTAAGTGGATCTaGATGGTAAAGAGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: IFGGVTAPHLHPDFRNLATSKWI*MVKRSG
Trigger: CCCCGACCTCTTTACCATCCAGATCCACTTACTGGT...AGCAAGGTTGCGGAAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp TGTGGCATTGTTCCTGTGACCTGGAAGCCCCCTCCCTGCTTCAAGTTGTCCCTGTGCTGTACCAGTAAGTaGATCTGGATGGTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: CGIVPVTWKPPPCFKLSLCCTSK*IWMVKR
Trigger: CCTCTTTACCATCCAGATCCACTTACTGGTACAGCA...CAGGGACAACTTGAAGCAGGGAGGGGGCTTCCAGGTCACAGGAACAATGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR TCA 90 bp ATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTCCGCAACCTTGCTTCTATCTGGGTCCACTaGAGTCTGGGCTTAAAATCC +
Preference number: 4 (lower is better)
Translates to: IFGGVTAPHLHPDFRNLASIWVH*SLGLKS
Trigger: GGATTTTAAGCCCAGACTTCAGTGGACCCAGATAGA...AGCAAGGTTGCGGAAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp CACCCTACAGATTTTGGCTATGCAATGTGCTCAGGGTTGTTAATTTGTACACAGAGGCTCCGGAATGTTTaGCGGGCGTCATGGCGACGG +
Preference number: 4 (lower is better)
Translates to: HPTDFGYAMCSGLLICTQRLRNV*RASWRR
Trigger: CCGTCGCCATGACGCCCGGCAAACATTCCGGAGCCT...CTGTGTACAAATTAACAACCCTGAGCACATTGCATAGCCAAAATCTGTAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR GCA 90 bp CTGTTAGCAATGAATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTATGGTGGCGGACACCTaGAATCCCAGCTACTTGGGA +
Preference number: 4 (lower is better)
Translates to: LLAMNIWRSHCSPSPPRFMVADT*NPSYLG
Trigger: TCCCAAGTAGCTGGGATTGCAGGTGTCCGCCACCAT...AAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATATTCATTGCTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CCA 90 bp CAAGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTTTCCTCATCTGAGAGACTGGCATGGTaGCGACCAGCTGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: QALEPEQLANFSLPVSSSERLAW*RPAGEW
Trigger: CCACTCCCCAGCTGGTCGCCACCATGCCAGTCTCTC...AGATGAGGAAACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CCA 90 bp GTTGTGTGGCATTGTTCCTGTGACCTGGAAGCCCCCTCCCTGCTTCAAGTTGTCTTGTCCCTGCCTTTCTaGATGGAACCAATGTACTTC +
Preference number: 4 (lower is better)
Translates to: VVWHCSCDLEAPSLLQVVLSLPF*MEPMYF
Trigger: GAAGTACATTGGTTCCATCCAGAAAGGCAGGGACAA...GACAACTTGAAGCAGGGAGGGGGCTTCCAGGTCACAGGAACAATGCCACACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR GCA 90 bp TTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTGGCCTCAGTTTAACCCAGCTGCTTGTGACTGCCTaGCGGAGAGACTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: LECFIEQPIMSCGLSLTQLLVTA*RRDWHG
Trigger: ACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAG...CTGGGTTAAACTGAGGCCACAGGACATGATGGGCTGTTCTATAAAGCATTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR GCA 90 bp TGGTTGTGTGGCATTGTTCCTGTGACCTGGAAGCCCCCTCCCTGCTTCAAGTTGTGGACACAGCCATTCTaGTTTGATTTGCACCAGTAT +
Preference number: 4 (lower is better)
Translates to: WLCGIVPVTWKPPPCFKLWTQPF*FDLHQY
Trigger: ATACTGGTGCAAATCAAAGCAGAATGGCTGTGTCCA...CAACTTGAAGCAGGGAGGGGGCTTCCAGGTCACAGGAACAATGCCACACAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR GCA 90 bp CTGTTAGCAATGAATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTGCAGTGAGCCAAGATTaGACTCCAGTCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: LLAMNIWRSHCSPSPPRFAVSQD*TPVWVT
Trigger: TGTCACCCAGACTGGAGTGCAATCTTGGCTCACTGC...AAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATATTCATTGCTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CCA 90 bp TACAGATTTTGGCTATGCAATGTGCTCAGGGTTGTTAATTTGTACACAGTGAGACCGGAGAGACTGGCATaGTGGCGACCAGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: YRFWLCNVLRVVNLYTVRPERLA*WRPAGE
Trigger: CTCCCCAGCTGGTCGCCACCATGCCAGTCTCTCCGG...TCTCACTGTGTACAAATTAACAACCCTGAGCACATTGCATAGCCAAAATCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CCA 90 bp TCACTTGCTGATACACTTGACTTAGAAACTGTACTGCTTCCTAAAACTGACCTTGCCTGCCGGAGAGACTaGCATGGTGGCGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLADTLDLETVLLPKTDLACRRD*HGGDQL
Trigger: CAGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGC...AAGGTCAGTTTTAGGAAGCAGTACAGTTTCTAAGTCAAGTGTATCAGCAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531980.5
CDS-3UTR TCA 90 bp AAGTGGATCTGGATGGTAAAGAGGTCGGGGAGTAACATCAGTTCCATTTATGTCAAGTTCTGCTGCTTGTaGCTGCCTGCCGGAGAGACT +
Preference number: 4 (lower is better)
Translates to: KWIWMVKRSGSNISSIYVKFCCL*LPAGET
Trigger: AGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTT...GACATAAATGGAACTGATGTTACTCCCCGACCTCTTTACCATCCAGATCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR TCA 90 bp CTGTTAGCAATGAATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTCAAGGCTGCTCACATTaGGGCCTTTGGTTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: LLAMNIWRSHCSPSPPRFQGCSH*GLWLSH
Trigger: GTGACTTAACCAAAGGCCTCAATGTGAGCAGCCTTG...AAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATATTCATTGCTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp ATGCTGATTGGTTTGACTTGGATCCAAGCAAAGTATCCATTATATCTCCCCGGCGAGAGGAGAATTGCTTaGACCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: MLIGLTWIQAKYPLYLPGERRIA*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTCTC...GCCGGGGAGATATAATGGATACTTTGCTTGGATCCAAGTCAAACCAATCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR GCA 90 bp AGTAAGTGGATCTGGATGGTAAAGAGGTCGGGGAGTAACATCAGTTCCATTTATTCTGCTGCTTGTGACTaGCTGCCGGAGAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: SKWIWMVKRSGSNISSIYSAACD*LPERLA
Trigger: TGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGA...ATAAATGGAACTGATGTTACTCCCCGACCTCTTTACCATCCAGATCCACTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR CCA 90 bp TTAGTGAATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAATGGTGGCGACCAGCTaGGGAGTGGTGCACCACCCC +
Preference number: 4 (lower is better)
Translates to: LVNFICPIVSSPLRMLYRMVATS*GVVHHP
Trigger: GGGGTGGTGCACCACTCCCCAGCTGGTCGCCACCAT...TCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATTCACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR CCA 90 bp TTGAACATCTTTATTCTTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATGGTGGCGACCAGCTaGGGAGTGGTGCACCACCCC +
Preference number: 4 (lower is better)
Translates to: LNIFILWCSIESLHHPFNMVATS*GVVHHP
Trigger: GGGGTGGTGCACCACTCCCCAGCTGGTCGCCACCAT...GTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAAAGATGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531980.5
CDS-3UTR CCA 90 bp TTATTCTTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATATAGGTCACCGGAGAGACTGGCATaGTGGCGACCAGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LFFGAPLKVCIILSTYRSPERLA*WRPAGE
Trigger: CTCCCCAGCTGGTCGCCACCATGCCAGTCTCTCCGG...TGACCTATATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531980.5
CDS-3UTR CCA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTGCCTGCCGGAGAGACTaGCATGGTGGCGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGACRRD*HGGDQL
Trigger: CAGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGC...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR CCA 90 bp ATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTCCGCAACCTTGCTACTACTATCCAGAACTaGAACATTACTGTTGCTCCG +
Preference number: 4 (lower is better)
Translates to: IFGGVTAPHLHPDFRNLATTIQN*NITVAP
Trigger: CGGAGCAACAGTAATGTTCCAGTTCTGGATAGTAGT...AGCAAGGTTGCGGAAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR CCA 90 bp AAGTGGATCTGGATGGTAAAGAGGTCGGGGAGTAACATCAGTTCCATTTATGTCATTGTTCCTGTGACCTaGAAGCCCCCTCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KWIWMVKRSGSNISSIYVIVPVT*KPPPCF
Trigger: GAAGCAGGGAGGGGGCTTCCAGGTCACAGGAACAAT...GACATAAATGGAACTGATGTTACTCCCCGACCTCTTTACCATCCAGATCCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR CCA 90 bp CCCCTCCCTGCTTCAAGTTGTCCCTGCCTTTCTGGATGGAACCAATGTACTTCTACTTCTTTGGTTGTGTaGCATTGTTCCTGTGACCTG +
Preference number: 4 (lower is better)
Translates to: PLPASSCPCLSGWNQCTSTSLVV*HCSCDL
Trigger: CAGGTCACAGGAACAATGCCACACAACCAAAGAAGT...AGAAGTACATTGGTTCCATCCAGAAAGGCAGGGACAACTTGAAGCAGGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR TCA 90 bp GTTAAGTGCACAAGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTAAGTTCTGCTGCTTGTaGCTGCCTGCCGGAGAGACT +
Preference number: 4 (lower is better)
Translates to: VKCTSSRTRTVSKLLFACKFCCL*LPAGET
Trigger: AGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTT...ACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCTTGTGCACTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR GCA 90 bp TTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATATAGGTCATTGCCTCTGCTTGTGACTGCCTaGCGGAGAGACTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: FGAPLKVCIILSTYRSLPLLVTA*RRDWHG
Trigger: ACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAG...AGGCAATGACCTATATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531980.5
CDS-3UTR GCA 90 bp AGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTTTCCTCATCTATTCTGCTGCTTGTGACTaGCTGCCGGAGAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: SSRTRTVSKLLFACFLIYSAACD*LPERLA
Trigger: TGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGA...ATAGATGAGGAAACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CCA 90 bp ATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTCCGCAACCTTGCTTGTCACTTTATACACTaGACCCTTATGTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: IFGGVTAPHLHPDFRNLACHFIH*TLMSSV
Trigger: TACAGAGGACATAAGGGTCCAGTGTATAAAGTGACA...AGCAAGGTTGCGGAAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp TTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTGGCCTCAGTTTAACCCAGCATGGGATTCTTTATTaGCCAGCAGCAAGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LECFIEQPIMSCGLSLTQHGILY*PAASQS
Trigger: GGACTGGCTTGCTGCTGGTCAATAAAGAATCCCATG...CTGGGTTAAACTGAGGCCACAGGACATGATGGGCTGTTCTATAAAGCATTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp CTGAAAGCTATAGAACACAGTGTCCAACTACTGTTGTGGTTTGGCCAAATTATTCTGCTTGTGACTGCCTaGCGGAGAGACTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: LKAIEHSVQLLLWFGQIILLVTA*RRDWHG
Trigger: ACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAG...AATAATTTGGCCAAACCACAACAGTAGTTGGACACTGTGTTCTATAGCTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CCA 90 bp TCACAGGAAAAAGACCAAAGTCGTTCCAAGTTGGCGGGTATTGTTGATTCTTCTGCCCATCATGTCCTGTaGCCTCAGTTTAACCCAGGA +
Preference number: 4 (lower is better)
Translates to: SQEKDQSRSKLAGIVDSSAHHVL*PQFNPG
Trigger: TCCTGGGTTAAACTGAGGCCACAGGACATGATGGGC...AGAAGAATCAACAATACCCGCCAACTTGGAACGACTTTGGTCTTTTTCCTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CCA 90 bp TTGAACATCTTTATTCTTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACCTTCAGAGGCTGAGGTaGGAGGATCGCTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LNIFILWCSIESLHHPFNLQRLR*EDRWSP
Trigger: TGGGCTCCAGCGATCCTCCCACCTCAGCCTCTGAAG...GTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAAAGATGTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR CAA 72 bp ACAAACTGCATAGAATGGCCTGTTAGCAATGAATATTaGGAGGAGTCACTGCTCCCCATCTCCACCCCGATT +
Preference number: 4 (lower is better)
Translates to: TNCIEWPVSNEY*EESLLPISTPI
Trigger: AATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATATTCATTGCTAACAGGCCATTCTATGCAGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp CTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTTCCAAAGTGCTGATATaGAGGTCCCAAATCTCCACC +
Preference number: 4 (lower is better)
Translates to: LSSPLHLECFIEQPIMSCSKVLI*RSQIST
Trigger: GGTGGAGATTTGGGACCTTCATATCAGCACTTTGGA...ACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp AAGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGAGGTACTTCAGAGGCTaGGGTGGGAGGATCGCTGGA +
Preference number: 4 (lower is better)
Translates to: KGLVQTNGVYEAMDTCKRRYFRG*GGRIAG
Trigger: TCCAGCGATCCTCCCACCTCAGCCTCTGAAGTACCT...CCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR GCA 90 bp TTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTCTGTCTGCTGCTTGTGACTaGCTGCCGGAGAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: FFSLNWECDKRWSNHKILSAACD*LPERLA
Trigger: TGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGA...CAGAATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR GCA 90 bp ATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTCCGCAACCTTGCTTTTGTTAAAACAAACTaGATAGAATGGCCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: IFGGVTAPHLHPDFRNLAFVKTN*IEWPVS
Trigger: GCTAACAGGCCATTCTATGCAGTTTGTTTTAACAAA...AGCAAGGTTGCGGAAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp TTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTGGCCTCAGTTTAACCCAGGGTAGTTCCCACTGTTaGACTGATTCCAGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LECFIEQPIMSCGLSLTQGSSHC*TDSSLG
Trigger: ACCAAGACTGGAATCAGTGCAACAGTGGGAACTACC...CTGGGTTAAACTGAGGCCACAGGACATGATGGGCTGTTCTATAAAGCATTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp CTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTGGTAGTTCCCACTGTTaGACTGATTCCAGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LSSPLHLECFIEQPIMSCGSSHC*TDSSLG
Trigger: ACCAAGACTGGAATCAGTGCAACAGTGGGAACTACC...ACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp CCCTACAGATTTTGGCTATGCAATGTGCTCAGGGTTGTTAATTTGTACACAGTGACCAGTAAGTGGATCTaGATGGTAAAGAGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: PYRFWLCNVLRVVNLYTVTSKWI*MVKRSG
Trigger: CCCCGACCTCTTTACCATCCAGATCCACTTACTGGT...CACTGTGTACAAATTAACAACCCTGAGCACATTGCATAGCCAAAATCTGTAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CCA 90 bp ATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTCCGCAACCTTGCTAACATCTTTATTCTTTaGTGCTCCATTGAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: IFGGVTAPHLHPDFRNLANIFIL*CSIESL
Trigger: CAGACTTTCAATGGAGCACCAAAGAATAAAGATGTT...AGCAAGGTTGCGGAAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp AAGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGAAGTTCTGCTGCTTGTaGCTGCCTGCCGGAGAGACT +
Preference number: 4 (lower is better)
Translates to: KGLVQTNGVYEAMDTCKRKFCCL*LPAGET
Trigger: AGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTT...CCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR TCA 90 bp TTGAGGCCTTTGGTTAAGTCACAGGAAAAAGACCAAAGTCGTTCCAAGTTGGCGGTTGGCGGGTATTGTTaGTTCTTCTGCATGTATTTC +
Preference number: 4 (lower is better)
Translates to: LRPLVKSQEKDQSRSKLAVGGYC*FFCMYF
Trigger: GAAATACATGCAGAAGAATCAACAATACCCGCCAAC...CGCCAACTTGGAACGACTTTGGTCTTTTTCCTGTGACTTAACCAAAGGCCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR TCA 90 bp TCACAGGAAAAAGACCAAAGTCGTTCCAAGTTGGCGGGTATTGTTGATTCTTCTTCCAAAGTGCTGATATaGAGGTCCCAAATCTCCACC +
Preference number: 4 (lower is better)
Translates to: SQEKDQSRSKLAGIVDSSSKVLI*RSQIST
Trigger: GGTGGAGATTTGGGACCTTCATATCAGCACTTTGGA...AGAAGAATCAACAATACCCGCCAACTTGGAACGACTTTGGTCTTTTTCCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR GCA 90 bp AACATCTTTATTCTTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATATCTGCTGCTTGTGACTaGCTGCCGGAGAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: NIFILWCSIESLHHPFNISAACD*LPERLA
Trigger: TGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGA...TATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAAAGATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531980.5
CDS-3UTR GCA 90 bp CTGTTAGCAATGAATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTACTGACCTTGTAAACTaGCCTAACGTACTAGGATTT +
Preference number: 4 (lower is better)
Translates to: LLAMNIWRSHCSPSPPRFTDLVN*PNVLGF
Trigger: AAATCCTAGTACGTTAGGGCAGTTTACAAGGTCAGT...AAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATATTCATTGCTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp TTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTCTGATTTGGAGGAGTCACTaGTCCCCATCTCCACCCCGA +
Preference number: 4 (lower is better)
Translates to: FFSLNWECDKRWSNHKILIWRSH*SPSPPR
Trigger: TCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAAT...CAGAATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp CTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTTTCCCGTTTATAGGATaGTTCTTCCAGGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LSSPLHLECFIEQPIMSCFPFIG*FFQVFC
Trigger: GCAGAAGACCTGGAAGAACCATCCTATAAACGGGAA...ACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp CTGTTAGCAATGAATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTAATATTGCATCTGAGTaGTCTTCCTCATCTTCATGG +
Preference number: 4 (lower is better)
Translates to: LLAMNIWRSHCSPSPPRFNIASE*SSSSSW
Trigger: CCATGAAGATGAGGAAGACCACTCAGATGCAATATT...AAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATATTCATTGCTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp ATTGATTCACTTGCTGATACACTTGACTTAGAAACTGTACTGCTTCCTAAAACTAAGTTCTGCTGCTTGTaGCTGCCTGCCGGAGAGACT +
Preference number: 4 (lower is better)
Translates to: IDSLADTLDLETVLLPKTKFCCL*LPAGET
Trigger: AGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTT...AGTTTTAGGAAGCAGTACAGTTTCTAAGTCAAGTGTATCAGCAAGTGAATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531980.5
CDS-3UTR TCA 90 bp CTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTTCTTTGGTGCTCCATTaGAAGTCTGCATCATCCTTT +
Preference number: 4 (lower is better)
Translates to: LSSPLHLECFIEQPIMSCSLVLH*KSASSF
Trigger: AAAGGATGATGCAGACTTTCAATGGAGCACCAAAGA...ACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp GCAAGGCTGCTCACATTGAGGCCTTTGGTTAAGTCACAGGAAAAAGACCAAAGTGCTGCAAGTTTGGGCTaGAATATATTTTCCATCAGA +
Preference number: 4 (lower is better)
Translates to: ARLLTLRPLVKSQEKDQSAASLG*NIFSIR
Trigger: TCTGATGGAAAATATATTTCAGCCCAAACTTGCAGC...ACTTTGGTCTTTTTCCTGTGACTTAACCAAAGGCCTCAATGTGAGCAGCCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR TCA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATCATGGGATTCTTTATTaGCCAGCAGCAAGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDHGILY*PAASQS
Trigger: GGACTGGCTTGCTGCTGGTCAATAAAGAATCCCATG...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp CTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTAACTCAAAGATGGCTTaGCATTCTCCTGTTGCCATA +
Preference number: 4 (lower is better)
Translates to: LSSPLHLECFIEQPIMSCNSKMA*HSPVAI
Trigger: TATGGCAACAGGAGAATGTCAAGCCATCTTTGAGTT...ACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp ATGCTGATTGGTTTGACTTGGATCCAAGCAAAGTATCCATTATATCTCCCCGGCCTTAAAATCCAGAGCTaGTTCTGGGCAAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: MLIGLTWIQAKYPLYLPGLKIQS*FWANRE
Trigger: TTCTCTGTTTGCCCAGAATCAGCTCTGGATTTTAAG...GCCGGGGAGATATAATGGATACTTTGCTTGGATCCAAGTCAAACCAATCAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR GCA 90 bp ACCAGTAAGTGGATCTGGATGGTAAAGAGGTCGGGGAGTAACATCAGTTCCATTGAGTTTACTTGGTTTTaGTGTACCAGTAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: TSKWIWMVKRSGSNISSIEFTWF*CTSKWI
Trigger: GATCCACTTACTGGTACAGCAAAACCAAGTAAACTC...AATGGAACTGATGTTACTCCCCGACCTCTTTACCATCCAGATCCACTTACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR GCA 90 bp CTGTTAGCAATGAATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTCTGGAACATTACTGTTaGTCCGTACATTGTAAATTG +
Preference number: 4 (lower is better)
Translates to: LLAMNIWRSHCSPSPPRFLEHYC*SVHCKL
Trigger: CAATTTACAATGTACGGAGCAACAGTAATGTTCCAG...AAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATATTCATTGCTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR GCA 90 bp TTGAGGCCTTTGGTTAAGTCACAGGAAAAAGACCAAAGTCGTTCCAAGTTGGCGCTAGTATTTCTCTTTTaGCATCTCCTGTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LRPLVKSQEKDQSRSKLALVFLF*HLLLFL
Trigger: GAGGAACAACAGGAGATGGCAAAAGAGAAATACTAG...CGCCAACTTGGAACGACTTTGGTCTTTTTCCTGTGACTTAACCAAAGGCCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CCA 90 bp ACCAGTAAGTGGATCTGGATGGTAAAGAGGTCGGGGAGTAACATCAGTTCCATTAGTTTTCAGTTCAGGTaGAATAAGCACGGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: TSKWIWMVKRSGSNISSISFQFR*NKHGFG
Trigger: TCCAAAACCGTGCTTATTCCACCTGAACTGAAAACT...AATGGAACTGATGTTACTCCCCGACCTCTTTACCATCCAGATCCACTTACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR CCA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATACCAGTAAGTGGATCTaGATGGTAAAGAGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDTSKWI*MVKRSG
Trigger: CCCCGACCTCTTTACCATCCAGATCCACTTACTGGT...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp TGTGAAACTAGTCAATCTTTCCCGTTTATAGGATGGTTCTTCCAGGTCTTCTGCTTCCCGTTTATAGGATaGTTCTTCCAGGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CETSQSFPFIGWFFQVFCFPFIG*FFQVFC
Trigger: GCAGAAGACCTGGAAGAACCATCCTATAAACGGGAA...GCAGAAGACCTGGAAGAACCATCCTATAAACGGGAAAGATTGACTAGTTTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531980.5
CDS-3UTR CCA 90 bp AATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCTTCTGTAGTGCTCCCTaGCAATCTTTGGTCCTGATC +
Preference number: 4 (lower is better)
Translates to: NFICPIVSSPLRMLYRTAFCSAP*QSLVLI
Trigger: GATCAGGACCAAAGATTGCCAGGGAGCACTACAGAA...GGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp CTGTTAGCAATGAATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTAATAACATCCTGATGTaGCCTATAGATCAGAGACTT +
Preference number: 4 (lower is better)
Translates to: LLAMNIWRSHCSPSPPRFNNILM*PIDQRL
Trigger: AAGTCTCTGATCTATAGGCCACATCAGGATGTTATT...AAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATATTCATTGCTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp AGTAAGTGGATCTGGATGGTAAAGAGGTCGGGGAGTAACATCAGTTCCATTTATCCCTGCCTTTCTGGATaGAACCAATGTACTTCTTAC +
Preference number: 4 (lower is better)
Translates to: SKWIWMVKRSGSNISSIYPCLSG*NQCTSY
Trigger: GTAAGAAGTACATTGGTTCCATCCAGAAAGGCAGGG...ATAAATGGAACTGATGTTACTCCCCGACCTCTTTACCATCCAGATCCACTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR TCA 90 bp CCCTACAGATTTTGGCTATGCAATGTGCTCAGGGTTGTTAATTTGTACACAGTGATTCTACAGAGACCATaGCTGTGGGCAAGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: PYRFWLCNVLRVVNLYTVILQRP*LWASQK
Trigger: TTTTTGACTTGCCCACAGTCATGGTCTCTGTAGAAT...CACTGTGTACAAATTAACAACCCTGAGCACATTGCATAGCCAAAATCTGTAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR TCA 90 bp CTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTGGCAATCTTTGGTCCTaGTCTTTAGGAAGTACATTT +
Preference number: 4 (lower is better)
Translates to: LSSPLHLECFIEQPIMSCGNLWS*SLGSTF
Trigger: AAATGTACTTCCTAAAGATCAGGACCAAAGATTGCC...ACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp AAGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGCAAGGCTGCTCACATTaGGGCCTTTGGTTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: KGLVQTNGVYEAMDTCKRQGCSH*GLWLSH
Trigger: GTGACTTAACCAAAGGCCTCAATGTGAGCAGCCTTG...CCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp ATGCTGATTGGTTTGACTTGGATCCAAGCAAAGTATCCATTATATCTCCCCGGCTGCAAATATATAGGATaGTTTTGGAGACCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: MLIGLTWIQAKYPLYLPGCKYIG*FWRPGN
Trigger: GTTGCCTGGTCTCCAAAATCATCCTATATATTTGCA...GCCGGGGAGATATAATGGATACTTTGCTTGGATCCAAGTCAAACCAATCAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR TCA 90 bp TTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTCTGGTCTGGGTGACAGAGTaGGATCCTGAGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FFSLNWECDKRWSNHKILVWVTE*DPEKKK
Trigger: CTTCTTCTTCTCAGGATCTCACTCTGTCACCCAGAC...CAGAATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR TCA 90 bp AGGAAAAAGACCAAAGTCGTTCCAAGTTGGCGGGTATTGTTGATTCTTCTGCATGGTCCCAAATGTTTTTaGGGTGATTCACATGGGATT +
Preference number: 4 (lower is better)
Translates to: RKKTKVVPSWRVLLILLHGPKCF*GDSHGI
Trigger: AATCCCATGTGAATCACCTCAAAAACATTTGGGACC...ATGCAGAAGAATCAACAATACCCGCCAACTTGGAACGACTTTGGTCTTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR GCA 90 bp CTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTGCTGCCCTTATAACTTaGAAATCTGTGAAACTAGTC +
Preference number: 4 (lower is better)
Translates to: LSSPLHLECFIEQPIMSCAALIT*KSVKLV
Trigger: GACTAGTTTCACAGATTTGCAAGTTATAAGGGCAGC...ACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR GCA 90 bp GCAAGGCTGCTCACATTGAGGCCTTTGGTTAAGTCACAGGAAAAAGACCAAAGTGCTCCATTGAAAGTCTaGATCATCCTTTCAACATAT +
Preference number: 4 (lower is better)
Translates to: ARLLTLRPLVKSQEKDQSAPLKV*IILSTY
Trigger: ATATGTTGAAAGGATGATGCAGACTTTCAATGGAGC...ACTTTGGTCTTTTTCCTGTGACTTAACCAAAGGCCTCAATGTGAGCAGCCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR GCA 90 bp TTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTGGCCTCAGTTTAACCCAGTGTAAATTGCAATTGTaGCATTGTGATAGCCAACGG +
Preference number: 4 (lower is better)
Translates to: LECFIEQPIMSCGLSLTQCKLQL*HCDSQR
Trigger: CCGTTGGCTATCACAATGGCACAATTGCAATTTACA...CTGGGTTAAACTGAGGCCACAGGACATGATGGGCTGTTCTATAAAGCATTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR GCA 90 bp AGGCATATTTCTCAGTTCATACACAGAAACCTGTCCATCACTGTCTCCTACCAGTTAGTGAATTTCATATaGCCTATCGTCTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RHISQFIHRNLSITVSYQLVNFI*PIVSSP
Trigger: TGGAGAGGAGACGATAGGGCATATGAAATTCACTAA...CTGGTAGGAGACAGTGATGGACAGGTTTCTGTGTATGAACTGAGAAATATGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CCA 90 bp AACAGAAGTAGCTGGATAAAAACTCAAAGATGGCTTGACATTCTCCTGTTGCCATGCTGTACCAGTAAGTaGATCTGGATGGTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: NRSSWIKTQRWLDILLLPCCTSK*IWMVKR
Trigger: CCTCTTTACCATCCAGATCCACTTACTGGTACAGCA...TGGCAACAGGAGAATGTCAAGCCATCTTTGAGTTTTTATCCAGCTACTTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CCA 90 bp GCAAGGCTGCTCACATTGAGGCCTTTGGTTAAGTCACAGGAAAAAGACCAAAGTTGTCAAGAGTTTACTTaGTTTTGCTGTACCAGTAAG +
Preference number: 4 (lower is better)
Translates to: ARLLTLRPLVKSQEKDQSCQEFT*FCCTSK
Trigger: CTTACTGGTACAGCAAAACCAAGTAAACTCTTGACA...ACTTTGGTCTTTTTCCTGTGACTTAACCAAAGGCCTCAATGTGAGCAGCCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CCA 90 bp AGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTTTCCTCATCTATTTCCCGTTTATAGGATaGTTCTTCCAGGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SSRTRTVSKLLFACFLIYFPFIG*FFQVFC
Trigger: GCAGAAGACCTGGAAGAACCATCCTATAAACGGGAA...ATAGATGAGGAAACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CCA 90 bp CTGTTAGCAATGAATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTAACATCTTTATTCTTTaGTGCTCCATTGAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: LLAMNIWRSHCSPSPPRFNIFIL*CSIESL
Trigger: CAGACTTTCAATGGAGCACCAAAGAATAAAGATGTT...AAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATATTCATTGCTAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp TTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTGGCCTCAGTTTAACCCAGAATATTGCATCTGAGTaGTCTTCCTCATCTTCATGG +
Preference number: 4 (lower is better)
Translates to: LECFIEQPIMSCGLSLTQNIASE*SSSSSW
Trigger: CCATGAAGATGAGGAAGACCACTCAGATGCAATATT...CTGGGTTAAACTGAGGCCACAGGACATGATGGGCTGTTCTATAAAGCATTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp TTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTGGCCTCAGTTTAACCCAGAAAGTCGTTCCAAGTTaGCGGGTATTGTTGATTCTT +
Preference number: 4 (lower is better)
Translates to: LECFIEQPIMSCGLSLTQKVVPS*RVLLIL
Trigger: AAGAATCAACAATACCCGCCAACTTGGAACGACTTT...CTGGGTTAAACTGAGGCCACAGGACATGATGGGCTGTTCTATAAAGCATTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp CTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTTGTCACTTTATACACTaGACCCTTATGTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: LSSPLHLECFIEQPIMSCCHFIH*TLMSSV
Trigger: TACAGAGGACATAAGGGTCCAGTGTATAAAGTGACA...ACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp CTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTCTGATTGGTTTGACTTaGATCCAAGCAAAGTATCCA +
Preference number: 4 (lower is better)
Translates to: LSSPLHLECFIEQPIMSCLIGLT*IQAKYP
Trigger: TGGATACTTTGCTTGGATCCAAGTCAAACCAATCAG...ACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp GAATTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTGCCCATCATGTCCTGTaGCCTCAGTTTAACCCAGGA +
Preference number: 4 (lower is better)
Translates to: EFFSLNWECDKRWSNHKIAHHVL*PQFNPG
Trigger: TCCTGGGTTAAACTGAGGCCACAGGACATGATGGGC...AATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp AGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTTTCCTCATCTATACACCCTACAGATTTTaGCTATGCAATGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SSRTRTVSKLLFACFLIYTPYRF*LCNVLR
Trigger: CCTGAGCACATTGCATAGCCAAAATCTGTAGGGTGT...ATAGATGAGGAAACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CCA 90 bp AACAGAAGTAGCTGGATAAAAACTCAAAGATGGCTTGACATTCTCCTGTTGCCAAACACAAAGCGCCATTaGTTCCTCAGGCTGATGATT +
Preference number: 4 (lower is better)
Translates to: NRSSWIKTQRWLDILLLPNTKRH*FLRLMI
Trigger: AATCATCAGCCTGAGGAACCAATGGCGCTTTGTGTT...TGGCAACAGGAGAATGTCAAGCCATCTTTGAGTTTTTATCCAGCTACTTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR CAA 72 bp AGGAAAAAGACCAAAGTCGTTCCAAGTTGGCGGGTATaGTTGATTCTTCTGCATGTATTTCTTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RKKTKVVPSWRV*LILLHVFLLPP
Trigger: AGGAGGAAGAAGAAATACATGCAGAAGAATCAACAATACCCGCCAACTTGGAACGACTTTGGTCTTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR CAA 72 bp CAATCTGTTTGTTTGGCAAAGAGAATGGTTGTGAACTaGATTCCAGGGTTAGCAGTATTCACAATCAGAGGG +
Preference number: 4 (lower is better)
Translates to: QSVCLAKRMVVN*IPGLAVFTIRG
Trigger: CCCTCTGATTGTGAATACTGCTAACCCTGGAATCAAGTTCACAACCATTCTCTTTGCCAAACAAACAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR TCA 90 bp ACTGTCTCCTACCAGAAGGCAATCTGTTTGTTTGGCAAAGAGAATGGTTGTGAAGGCAATCTTTGGTCCTaGTCTTTAGGAAGTACATTT +
Preference number: 4 (lower is better)
Translates to: TVSYQKAICLFGKENGCEGNLWS*SLGSTF
Trigger: AAATGTACTTCCTAAAGATCAGGACCAAAGATTGCC...TTCACAACCATTCTCTTTGCCAAACAAACAGATTGCCTTCTGGTAGGAGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR TCA 90 bp TTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTCTGGAGGGTCCAAAGTGCTaGTATGAAGGTCCCAAATCT +
Preference number: 4 (lower is better)
Translates to: FFSLNWECDKRWSNHKILEGPKC*YEGPKS
Trigger: AGATTTGGGACCTTCATATCAGCACTTTGGACCCTC...CAGAATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp TTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATATAGGTCATTGCCTTTCCCACTGTTGCACTaGTTCCAGTCTTGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: FGAPLKVCIILSTYRSLPFPLLH*FQSWFL
Trigger: TAAAAACCAAGACTGGAATCAGTGCAACAGTGGGAA...AGGCAATGACCTATATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR TCA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATGGCAGGCAAATCATTTaGGGTCAGAAGTTTGAAACC +
Preference number: 4 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDGRQII*GQKFET
Trigger: GGTTTCAAACTTCTGACCTCAAATGATTTGCCTGCC...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR GCA 90 bp AGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTTTCCTCATCTATTGGACACAGCCATTCTaGTTTGATTTGCACCAGTAT +
Preference number: 4 (lower is better)
Translates to: SSRTRTVSKLLFACFLIYWTQPF*FDLHQY
Trigger: ATACTGGTGCAAATCAAAGCAGAATGGCTGTGTCCA...ATAGATGAGGAAACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR GCA 90 bp CAAGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTTTCCTCATCTACTGACCTTGTAAACTaGCCTAACGTACTAGGATTT +
Preference number: 4 (lower is better)
Translates to: QALEPEQLANFSLPVSSSTDLVN*PNVLGF
Trigger: AAATCCTAGTACGTTAGGGCAGTTTACAAGGTCAGT...AGATGAGGAAACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR GCA 90 bp CAAGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTTTCCTCATCTGCTGCCCTTATAACTTaGAAATCTGTGAAACTAGTC +
Preference number: 4 (lower is better)
Translates to: QALEPEQLANFSLPVSSSAALIT*KSVKLV
Trigger: GACTAGTTTCACAGATTTGCAAGTTATAAGGGCAGC...AGATGAGGAAACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR GCA 90 bp TTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTGGCCTCAGTTTAACCCAGTTGACATTCTCCTGTTaGCATATAATAACACCCCAA +
Preference number: 4 (lower is better)
Translates to: LECFIEQPIMSCGLSLTQLTFSC*HIITPQ
Trigger: TTGGGGTGTTATTATATGGCAACAGGAGAATGTCAA...CTGGGTTAAACTGAGGCCACAGGACATGATGGGCTGTTCTATAAAGCATTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp AGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTTTCCTCATCTATACTTCTTTGGTTGTGTaGCATTGTTCAACCCGAAGT +
Preference number: 4 (lower is better)
Translates to: SSRTRTVSKLLFACFLIYTSLVV*HCSTRS
Trigger: ACTTCGGGTTGAACAATGCCACACAACCAAAGAAGT...ATAGATGAGGAAACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CCA 90 bp GATATTCCCCTGGTAATTCTCTTGAAGCGACTTCACAAGCCAGCATTTGGAAATAGTTTTCAGTTCAGGTaGAATAAGCACGGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: DIPLVILLKRLHKPAFGNSFQFR*NKHGFG
Trigger: TCCAAAACCGTGCTTATTCCACCTGAACTGAAAACT...ATTTCCAAATGCTGGCTTGTGAAGTCGCTTCAAGAGAATTACCAGGGGAATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CCA 90 bp CTGAAAGCTATAGAACACAGTGTCCAACTACTGTTGTGGTTTGGCCAAATTATTTGCTGTACCAGTAAGTaGATCTGGATGGTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LKAIEHSVQLLLWFGQIICCTSK*IWMVKR
Trigger: CCTCTTTACCATCCAGATCCACTTACTGGTACAGCA...AATAATTTGGCCAAACCACAACAGTAGTTGGACACTGTGTTCTATAGCTTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CCA 90 bp GTTGATAGGGCTTTGTTCCTTTCTGAAGGTTTTAAAGGAGAATTTGTTTCCTTGTTCTGTAGTGCTCCCTaGCAATCTTTGGTCCTGATC +
Preference number: 4 (lower is better)
Translates to: VDRALFLSEGFKGEFVSLFCSAP*QSLVLI
Trigger: GATCAGGACCAAAGATTGCCAGGGAGCACTACAGAA...CAAGGAAACAAATTCTCCTTTAAAACCTTCAGAAAGGAACAAAGCCCTATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469450.1
CDS-3UTR CCA 90 bp AAGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTTCTGTAGTGCTCCCTaGCAATCTTTGGTCCTGATC +
Preference number: 4 (lower is better)
Translates to: KGLVQTNGVYEAMDTCKRFCSAP*QSLVLI
Trigger: GATCAGGACCAAAGATTGCCAGGGAGCACTACAGAA...CCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp TTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTGGCCTCAGTTTAACCCAGCTGATAAATACGTTCTaGCCACATGGGATTCTTTAT +
Preference number: 4 (lower is better)
Translates to: LECFIEQPIMSCGLSLTQLINTF*PHGILY
Trigger: ATAAAGAATCCCATGTGGCCAGAACGTATTTATCAG...CTGGGTTAAACTGAGGCCACAGGACATGATGGGCTGTTCTATAAAGCATTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR CCA 90 bp CTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTATGAATTATGCTGATTaGTTTGACTTGGATCCAAGC +
Preference number: 4 (lower is better)
Translates to: LSSPLHLECFIEQPIMSCMNYAD*FDLDPS
Trigger: GCTTGGATCCAAGTCAAACCAATCAGCATAATTCAT...ACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp TTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTGGCCTCAGTTTAACCCAGGAATGTGATAAGCGCTaGTCAAACCATAAAATTCTG +
Preference number: 4 (lower is better)
Translates to: LECFIEQPIMSCGLSLTQECDKR*SNHKIL
Trigger: CAGAATTTTATGGTTTGACCAGCGCTTATCACATTC...CTGGGTTAAACTGAGGCCACAGGACATGATGGGCTGTTCTATAAAGCATTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp AACAGAAGTAGCTGGATAAAAACTCAAAGATGGCTTGACATTCTCCTGTTGCCATTAGCAATGAATATTTaGAGGAGTCACTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: NRSSWIKTQRWLDILLLPLAMNI*RSHCSP
Trigger: TGGGGAGCAGTGACTCCTCCAAATATTCATTGCTAA...TGGCAACAGGAGAATGTCAAGCCATCTTTGAGTTTTTATCCAGCTACTTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR TCA 90 bp TACAGATTTTGGCTATGCAATGTGCTCAGGGTTGTTAATTTGTACACAGTGAGATCTTTGGTGCTCCATTaGAAGTCTGCATCATCCTTT +
Preference number: 4 (lower is better)
Translates to: YRFWLCNVLRVVNLYTVRSLVLH*KSASSF
Trigger: AAAGGATGATGCAGACTTTCAATGGAGCACCAAAGA...TCTCACTGTGTACAAATTAACAACCCTGAGCACATTGCATAGCCAAAATCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR TCA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATAACTCAAAGATGGCTTaGCATTCTCCTGTTGCCATA +
Preference number: 4 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDNSKMA*HSPVAI
Trigger: TATGGCAACAGGAGAATGTCAAGCCATCTTTGAGTT...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp GAATTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTGAGGGTCCAAAGTGCTaGTATGAAGGTCCCAAATCT +
Preference number: 4 (lower is better)
Translates to: EFFSLNWECDKRWSNHKIEGPKC*YEGPKS
Trigger: AGATTTGGGACCTTCATATCAGCACTTTGGACCCTC...AATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp GAATTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTTCTATCTGGGTCCACTaGAGTCTGGGCTTAAAATCC +
Preference number: 4 (lower is better)
Translates to: EFFSLNWECDKRWSNHKISIWVH*SLGLKS
Trigger: GGATTTTAAGCCCAGACTTCAGTGGACCCAGATAGA...AATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp GCTCCATTGAAAGTCTGCATCATCCTTTCAACATATAGGTCATTGCCTAATCTGACTGACCTTGTAAACTaGCCTAACGTACTAGGATTT +
Preference number: 4 (lower is better)
Translates to: APLKVCIILSTYRSLPNLTDLVN*PNVLGF
Trigger: AAATCCTAGTACGTTAGGGCAGTTTACAAGGTCAGT...CAGATTAGGCAATGACCTATATGTTGAAAGGATGATGCAGACTTTCAATGGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491297.6
ENST00000531980.5
CDS-3UTR GCA 90 bp CCCTACAGATTTTGGCTATGCAATGTGCTCAGGGTTGTTAATTTGTACACAGTGGCTCCATTGAAAGTCTaGATCATCCTTTCAACATAT +
Preference number: 4 (lower is better)
Translates to: PYRFWLCNVLRVVNLYTVAPLKV*IILSTY
Trigger: ATATGTTGAAAGGATGATGCAGACTTTCAATGGAGC...CACTGTGTACAAATTAACAACCCTGAGCACATTGCATAGCCAAAATCTGTAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR GCA 90 bp AACAGAAGTAGCTGGATAAAAACTCAAAGATGGCTTGACATTCTCCTGTTGCCAAAGCTGACGATAAGCTaGAAGTTTGGGCTGAAATAT +
Preference number: 4 (lower is better)
Translates to: NRSSWIKTQRWLDILLLPKLTIS*KFGLKY
Trigger: ATATTTCAGCCCAAACTTGCAGCTTATCGTCAGCTT...TGGCAACAGGAGAATGTCAAGCCATCTTTGAGTTTTTATCCAGCTACTTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR GCA 90 bp AATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCACCCTGTTCTCATTTaGAGCTGCAAATATATAGGA +
Preference number: 4 (lower is better)
Translates to: NFICPIVSSPLRMLYRTAHPVLI*SCKYIG
Trigger: TCCTATATATTTGCAGCTGCAAATGAGAACAGGGTG...GGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp AACAGAAGTAGCTGGATAAAAACTCAAAGATGGCTTGACATTCTCCTGTTGCCACACCCTGTTCTCATTTaGAGCTGCAAATATATAGGA +
Preference number: 4 (lower is better)
Translates to: NRSSWIKTQRWLDILLLPHPVLI*SCKYIG
Trigger: TCCTATATATTTGCAGCTGCAAATGAGAACAGGGTG...TGGCAACAGGAGAATGTCAAGCCATCTTTGAGTTTTTATCCAGCTACTTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CCA 90 bp AGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTTTCCTCATCTATAGTTTTCAGTTCAGGTaGAATAAGCACGGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: SSRTRTVSKLLFACFLIYSFQFR*NKHGFG
Trigger: TCCAAAACCGTGCTTATTCCACCTGAACTGAAAACT...ATAGATGAGGAAACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CCA 90 bp CTGCTTCAAGTTGTCCCTGCCTTTCTGGATGGAACCAATGTACTTCTTACATATTGTCAAGAGTTTACTTaGTTTTGCTGTACCAGTAAG +
Preference number: 4 (lower is better)
Translates to: LLQVVPAFLDGTNVLLTYCQEFT*FCCTSK
Trigger: CTTACTGGTACAGCAAAACCAAGTAAACTCTTGACA...ATATGTAAGAAGTACATTGGTTCCATCCAGAAAGGCAGGGACAACTTGAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR CCA 90 bp TATAGGATGGTTCTTCCAGGTCTTCTGCTATTGATTCACTTGCTGATACACTTGACAAATCCCAGGCAGTaGACATTATGCCTTTATCTT +
Preference number: 4 (lower is better)
Translates to: YRMVLPGLLLLIHLLIHLTNPRQ*TLCLYL
Trigger: AAGATAAAGGCATAATGTCCACTGCCTGGGATTTGT...CAAGTGTATCAGCAAGTGAATCAATAGCAGAAGACCTGGAAGAACCATCCTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531980.5
CDS-3UTR CCA 90 bp AGGAAAAAGACCAAAGTCGTTCCAAGTTGGCGGGTATTGTTGATTCTTCTGCATAACAGCCAAAAGATCTaGATTTGTTTTATTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RKKTKVVPSWRVLLILLHNSQKI*ICFIPG
Trigger: GCCTGGAATAAAACAAATCCAGATCTTTTGGCTGTT...ATGCAGAAGAATCAACAATACCCGCCAACTTGGAACGACTTTGGTCTTTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CCA 90 bp ATGCTGATTGGTTTGACTTGGATCCAAGCAAAGTATCCATTATATCTCCCCGGCAGATATTTGTGTCCTTaGGATGAAAAGCAAAACACA +
Preference number: 4 (lower is better)
Translates to: MLIGLTWIQAKYPLYLPGRYLCP*DEKQNT
Trigger: TGTGTTTTGCTTTTCATCCCAAGGACACAAATATCT...GCCGGGGAGATATAATGGATACTTTGCTTGGATCCAAGTCAAACCAATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CCA 90 bp ACTGTCTCCTACCAGAAGGCAATCTGTTTGTTTGGCAAAGAGAATGGTTGTGAAAATAACATCCTGATGTaGCCTATAGATCAGAGACTT +
Preference number: 4 (lower is better)
Translates to: TVSYQKAICLFGKENGCENNILM*PIDQRL
Trigger: AAGTCTCTGATCTATAGGCCACATCAGGATGTTATT...TTCACAACCATTCTCTTTGCCAAACAAACAGATTGCCTTCTGGTAGGAGACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR CAA 72 bp TGGATAAAAACTCAAAGATGGCTTGACATTCTCCTGTaGCCATATAATAACACCCCAATCTGCAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: WIKTQRWLDILL*PYNNTPICRTA
Trigger: AGCTGTTCTGCAGATTGGGGTGTTATTATATGGCAACAGGAGAATGTCAAGCCATCTTTGAGTTTTTATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR TCA 90 bp GTTGATAGGGCTTTGTTCCTTTCTGAAGGTTTTAAAGGAGAATTTGTTTCCTTGTCTTTGGTGCTCCATTaGAAGTCTGCATCATCCTTT +
Preference number: 4 (lower is better)
Translates to: VDRALFLSEGFKGEFVSLSLVLH*KSASSF
Trigger: AAAGGATGATGCAGACTTTCAATGGAGCACCAAAGA...CAAGGAAACAAATTCTCCTTTAAAACCTTCAGAAAGGAACAAAGCCCTATCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469450.1
CDS-3UTR TCA 90 bp TTATTCTTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATATAGGTCATCTTTGGTGCTCCATTaGAAGTCTGCATCATCCTTT +
Preference number: 4 (lower is better)
Translates to: LFFGAPLKVCIILSTYRSSLVLH*KSASSF
Trigger: AAAGGATGATGCAGACTTTCAATGGAGCACCAAAGA...TGACCTATATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491297.6
ENST00000531980.5
CDS-3UTR TCA 90 bp TTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTCTGGGTCCCAAATGTTTTTaGGGTGATTCACTACTATCC +
Preference number: 4 (lower is better)
Translates to: FFSLNWECDKRWSNHKILGPKCF*GDSLLS
Trigger: GGATAGTAGTGAATCACCTCAAAAACATTTGGGACC...CAGAATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR TCA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATTGCAAATATATAGGATaGTTTTGGAGACCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDCKYIG*FWRPGN
Trigger: GTTGCCTGGTCTCCAAAATCATCCTATATATTTGCA...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp TTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTCTGTTCCCACTGTTGCACTaGTTCCAGTCTTGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: FFSLNWECDKRWSNHKILFPLLH*FQSWFL
Trigger: TAAAAACCAAGACTGGAATCAGTGCAACAGTGGGAA...CAGAATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTTGGACACAGCCATTCTaGTTTGATTTGCACCAGTAT +
Preference number: 4 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGWTQPF*FDLHQY
Trigger: ATACTGGTGCAAATCAAAGCAGAATGGCTGTGTCCA...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR GCA 90 bp TACAGATTTTGGCTATGCAATGTGCTCAGGGTTGTTAATTTGTACACAGTGAGAGAGTTTACTTGGTTTTaGTGTACCAGTAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: YRFWLCNVLRVVNLYTVREFTWF*CTSKWI
Trigger: GATCCACTTACTGGTACAGCAAAACCAAGTAAACTC...TCTCACTGTGTACAAATTAACAACCCTGAGCACATTGCATAGCCAAAATCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR GCA 90 bp TATAGGATGGTTCTTCCAGGTCTTCTGCTATTGATTCACTTGCTGATACACTTGGCTCCATTGAAAGTCTaGATCATCCTTTCAACATAT +
Preference number: 4 (lower is better)
Translates to: YRMVLPGLLLLIHLLIHLAPLKV*IILSTY
Trigger: ATATGTTGAAAGGATGATGCAGACTTTCAATGGAGC...CAAGTGTATCAGCAAGTGAATCAATAGCAGAAGACCTGGAAGAACCATCCTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531980.5
CDS-3UTR GCA 90 bp CCCTACAGATTTTGGCTATGCAATGTGCTCAGGGTTGTTAATTTGTACACAGTGATCTTTATTCTTTGGTaGTCCATTGAAAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: PYRFWLCNVLRVVNLYTVIFILW*SIESLH
Trigger: ATGCAGACTTTCAATGGAGCACCAAAGAATAAAGAT...CACTGTGTACAAATTAACAACCCTGAGCACATTGCATAGCCAAAATCTGTAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR GCA 90 bp TCTGACTGTGAAACTAGTCAATCTTTCCCGTTTATAGGATGGTTCTTCCAGGTCATCTTTATTCTTTGGTaGTCCATTGAAAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SDCETSQSFPFIGWFFQVIFILW*SIESLH
Trigger: ATGCAGACTTTCAATGGAGCACCAAAGAATAAAGAT...GACCTGGAAGAACCATCCTATAAACGGGAAAGATTGACTAGTTTCACAGTCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531980.5
CDS-3UTR GCA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTTCTATCCACTGTAGTTaGCATACAGGTCCCAAATGT +
Preference number: 4 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGSIHCS*HTGPKC
Trigger: ACATTTGGGACCTGTATGGCAACTACAGTGGATAGA...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp AACAGAAGTAGCTGGATAAAAACTCAAAGATGGCTTGACATTCTCCTGTTGCCATATGACCTTCTTCAGTaGCAGCCAAATAGATATTTG +
Preference number: 4 (lower is better)
Translates to: NRSSWIKTQRWLDILLLPYDLLQ*QPNRYL
Trigger: CAAATATCTATTTGGCTGGCACTGAAGAAGGTCATA...TGGCAACAGGAGAATGTCAAGCCATCTTTGAGTTTTTATCCAGCTACTTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR GCA 90 bp ACTGTCTCCTACCAGAAGGCAATCTGTTTGTTTGGCAAAGAGAATGGTTGTGAATTTGTTAAAACAAACTaGATAGAATGGCCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: TVSYQKAICLFGKENGCEFVKTN*IEWPVS
Trigger: GCTAACAGGCCATTCTATGCAGTTTGTTTTAACAAA...TTCACAACCATTCTCTTTGCCAAACAAACAGATTGCCTTCTGGTAGGAGACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR GCA 90 bp TTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTCTGCCTCTCCACTTAGAATaGTTTATAGAACAGCCCATC +
Preference number: 4 (lower is better)
Translates to: FFSLNWECDKRWSNHKILPLHLE*FIEQPI
Trigger: GATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGG...CAGAATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATTTAGTGAATTTCATATaGCCTATCGTCTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDLVNFI*PIVSSP
Trigger: TGGAGAGGAGACGATAGGGCATATGAAATTCACTAA...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp TTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATATAGGTCATTGCCTGAGTTTACTTGGTTTTaGTGTACCAGTAAGTGGATA +
Preference number: 4 (lower is better)
Translates to: FGAPLKVCIILSTYRSLPEFTWF*CTSKWI
Trigger: TATCCACTTACTGGTACAGCAAAACCAAGTAAACTC...AGGCAATGACCTATATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531980.5
CDS-3UTR CCA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTACTTCTTTGGTTGTGTaGCATTGTTCAACCCGAAGT +
Preference number: 4 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGTSLVV*HCSTRS
Trigger: ACTTCGGGTTGAACAATGCCACACAACCAAAGAAGT...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR CCA 90 bp GAATTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTTGCTGTACCAGTAAGTaGATCTGGATGGTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: EFFSLNWECDKRWSNHKICCTSK*IWMVKR
Trigger: CCTCTTTACCATCCAGATCCACTTACTGGTACAGCA...AATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp AGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTTTCCTCATCTATTGTCAAGAGTTTACTTaGTTTTGCTGTACCAGTAAG +
Preference number: 4 (lower is better)
Translates to: SSRTRTVSKLLFACFLIYCQEFT*FCCTSK
Trigger: CTTACTGGTACAGCAAAACCAAGTAAACTCTTGACA...ATAGATGAGGAAACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CCA 90 bp CCCTACAGATTTTGGCTATGCAATGTGCTCAGGGTTGTTAATTTGTACACAGTGAACATCTTTATTCTTTaGTGCTCCATTGAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: PYRFWLCNVLRVVNLYTVNIFIL*CSIESL
Trigger: CAGACTTTCAATGGAGCACCAAAGAATAAAGATGTT...CACTGTGTACAAATTAACAACCCTGAGCACATTGCATAGCCAAAATCTGTAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CCA 90 bp ACTGTCTCCTACCAGAAGGCAATCTGTTTGTTTGGCAAAGAGAATGGTTGTGAAGATAAGCTGCAAGTTTaGGCTGAAATATATTTTCCA +
Preference number: 4 (lower is better)
Translates to: TVSYQKAICLFGKENGCEDKLQV*AEIYFP
Trigger: TGGAAAATATATTTCAGCCCAAACTTGCAGCTTATC...TTCACAACCATTCTCTTTGCCAAACAAACAGATTGCCTTCTGGTAGGAGACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CCA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATAAAGTCGTTCCAAGTTaGCGGGTATTGTTGATTCTT +
Preference number: 4 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDKVVPS*RVLLIL
Trigger: AAGAATCAACAATACCCGCCAACTTGGAACGACTTT...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp AATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCATGAATTATGCTGATTaGTTTGACTTGGATCCAAGC +
Preference number: 4 (lower is better)
Translates to: NFICPIVSSPLRMLYRTAMNYAD*FDLDPS
Trigger: GCTTGGATCCAAGTCAAACCAATCAGCATAATTCAT...GGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATTTTTTCTCACTGAATTaGGAATGTGATAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDFFSLN*ECDKRW
Trigger: CCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAA...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp TTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTCTGTTAGCAATGAATATTTaGAGGAGTCACTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: FFSLNWECDKRWSNHKILLAMNI*RSHCSP
Trigger: TGGGGAGCAGTGACTCCTCCAAATATTCATTGCTAA...CAGAATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp GAATTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTTCTTTGGTGCTCCATTaGAAGTCTGCATCATCCTTT +
Preference number: 4 (lower is better)
Translates to: EFFSLNWECDKRWSNHKISLVLH*KSASSF
Trigger: AAAGGATGATGCAGACTTTCAATGGAGCACCAAAGA...AATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp GTTGATAGGGCTTTGTTCCTTTCTGAAGGTTTTAAAGGAGAATTTGTTTCCTTGGGCAATCTTTGGTCCTaGTCTTTAGGAAGTACATTT +
Preference number: 4 (lower is better)
Translates to: VDRALFLSEGFKGEFVSLGNLWS*SLGSTF
Trigger: AAATGTACTTCCTAAAGATCAGGACCAAAGATTGCC...CAAGGAAACAAATTCTCCTTTAAAACCTTCAGAAAGGAACAAAGCCCTATCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469450.1
CDS-3UTR TCA 90 bp TTAGTGAATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAGCTGCAAGTTTGGGCTaGAATATATTTTCCATCAGA +
Preference number: 4 (lower is better)
Translates to: LVNFICPIVSSPLRMLYRAASLG*NIFSIR
Trigger: TCTGATGGAAAATATATTTCAGCCCAAACTTGCAGC...TCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp GAATTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTGTTGGCGGGTATTGTTaGTTCTTCTGCATGTATTTC +
Preference number: 4 (lower is better)
Translates to: EFFSLNWECDKRWSNHKIVGGYC*FFCMYF
Trigger: GAAATACATGCAGAAGAATCAACAATACCCGCCAAC...AATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR TCA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATCAAATGTTTTTGAGGTaGTTCACTACTATCCAGAAC +
Preference number: 4 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDQMFLR*FTTIQN
Trigger: GTTCTGGATAGTAGTGAATCACCTCAAAAACATTTG...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR TCA 90 bp GAATTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTCTTAAAATCCAGAGCTaGTTCTGGGCAAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: EFFSLNWECDKRWSNHKILKIQS*FWANRE
Trigger: TTCTCTGTTTGCCCAGAATCAGCTCTGGATTTTAAG...AATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp TTAGTGAATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAGAGTTTACTTGGTTTTaGTGTACCAGTAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: LVNFICPIVSSPLRMLYREFTWF*CTSKWI
Trigger: GATCCACTTACTGGTACAGCAAAACCAAGTAAACTC...TCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp TTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTCTGGAGTTTACTTGGTTTTaGTGTACCAGTAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: FFSLNWECDKRWSNHKILEFTWF*CTSKWI
Trigger: GATCCACTTACTGGTACAGCAAAACCAAGTAAACTC...CAGAATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTAAGCTGACGATAAGCTaGAAGTTTGGGCTGAAATAT +
Preference number: 4 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGKLTIS*KFGLKY
Trigger: ATATTTCAGCCCAAACTTGCAGCTTATCGTCAGCTT...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp AACATCTTTATTCTTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATATCTATCCACTGTAGTTaGCATACAGGTCCCAAATGT +
Preference number: 4 (lower is better)
Translates to: NIFILWCSIESLHHPFNISIHCS*HTGPKC
Trigger: ACATTTGGGACCTGTATGGCAACTACAGTGGATAGA...TATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAAAGATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR GCA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTCTAGTATTTCTCTTTTaGCATCTCCTGTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGLVFLF*HLLLFL
Trigger: GAGGAACAACAGGAGATGGCAAAAGAGAAATACTAG...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTCGATTTCCGCAACCTTaGTCTAGAACTCTTCATAAA +
Preference number: 4 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGRFPQP*SRTLHK
Trigger: TTTATGAAGAGTTCTAGAGCAAGGTTGCGGAAATCG...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp ACATCTTTATTCTTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATATCCTCTCCACTTAGAATaGTTTATAGAACAGCCCATC +
Preference number: 4 (lower is better)
Translates to: TSLFFGAPLKVCIILSTYPLHLE*FIEQPI
Trigger: GATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGG...ATATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAAAGATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR GCA 90 bp TACAGATTTTGGCTATGCAATGTGCTCAGGGTTGTTAATTTGTACACAGTGAGATTTGGCTATGCAATGTaGTCAGGGTTGTTAATTTGT +
Preference number: 4 (lower is better)
Translates to: YRFWLCNVLRVVNLYTVRFGYAM*SGLLIC
Trigger: ACAAATTAACAACCCTGAGCACATTGCATAGCCAAA...TCTCACTGTGTACAAATTAACAACCCTGAGCACATTGCATAGCCAAAATCTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CCA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTTTCAGTTCAGGTaGAATAAGCACGGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGSFQFR*NKHGFG
Trigger: TCCAAAACCGTGCTTATTCCACCTGAACTGAAAACT...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp TCAATCTTTCCCGTTTATAGGATGGTTCTTCCAGGTCTTCTGCTATTGATTCACAACATCTTTATTCTTTaGTGCTCCATTGAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: SIFPVYRMVLPGLLLLIHNIFIL*CSIESL
Trigger: CAGACTTTCAATGGAGCACCAAAGAATAAAGATGTT...GTGAATCAATAGCAGAAGACCTGGAAGAACCATCCTATAAACGGGAAAGATTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531980.5
CDS-3UTR CCA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTACAAATCCCAGGCAGTaGACATTATGCCTTTATCTT +
Preference number: 4 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGTNPRQ*TLCLYL
Trigger: AAGATAAAGGCATAATGTCCACTGCCTGGGATTTGT...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp TTAGTGAATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAAATCCCAGGCAGTaGACATTATGCCTTTATCTT +
Preference number: 4 (lower is better)
Translates to: LVNFICPIVSSPLRMLYRTNPRQ*TLCLYL
Trigger: AAGATAAAGGCATAATGTCCACTGCCTGGGATTTGT...TCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATTCACTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp AATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCTCTTCCTCATCTTCATaGATTTTTGCCAGAATTACA +
Preference number: 4 (lower is better)
Translates to: NFICPIVSSPLRMLYRTASSSSS*IFARIT
Trigger: TGTAATTCTGGCAAAAATCCATGAAGATGAGGAAGA...GGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp AACAGAAGTAGCTGGATAAAAACTCAAAGATGGCTTGACATTCTCCTGTTGCCATCTTCCTCATCTTCATaGATTTTTGCCAGAATTACA +
Preference number: 4 (lower is better)
Translates to: NRSSWIKTQRWLDILLLPSSSSS*IFARIT
Trigger: TGTAATTCTGGCAAAAATCCATGAAGATGAGGAAGA...TGGCAACAGGAGAATGTCAAGCCATCTTTGAGTTTTTATCCAGCTACTTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CCA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATAGCAGTAACTCCATATaGACTCTGATAAATACGTTC +
Preference number: 4 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDSSNSI*TLINTF
Trigger: GAACGTATTTATCAGAGTCCATATGGAGTTACTGCT...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR CCA 90 bp GCTCCATTGAAAGTCTGCATCATCCTTTCAACATATAGGTCATTGCCTAATCTGAACAACAGAAGTAGCTaGATAAAAACTCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: APLKVCIILSTYRSLPNLNNRSS*IKTQRW
Trigger: CCATCTTTGAGTTTTTATCCAGCTACTTCTGTTGTT...CAGATTAGGCAATGACCTATATGTTGAAAGGATGATGCAGACTTTCAATGGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CCA 90 bp AAGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTTTTTCTCACTGAATTaGGAATGTGATAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: KGLVQTNGVYEAMDTCKRFFSLN*ECDKRW
Trigger: CCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAA...CCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp ACATCTTTATTCTTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATATCGATTTCCGCAACCTTaGTCTAGAACTCTTCATAAA +
Preference number: 4 (lower is better)
Translates to: TSLFFGAPLKVCIILSTYRFPQP*SRTLHK
Trigger: TTTATGAAGAGTTCTAGAGCAAGGTTGCGGAAATCG...ATATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAAAGATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CCA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTTGTCAAGAGTTTACTTaGTTTTGCTGTACCAGTAAG +
Preference number: 4 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGCQEFT*FCCTSK
Trigger: CTTACTGGTACAGCAAAACCAAGTAAACTCTTGACA...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp CAAGAAGTTGATAGGGCTTTGTTCCTTTCTGAAGGTTTTAAAGGAGAATTTGTTACAAATCCCAGGCAGTaGACATTATGCCTTTATCTT +
Preference number: 4 (lower is better)
Translates to: QEVDRALFLSEGFKGEFVTNPRQ*TLCLYL
Trigger: AAGATAAAGGCATAATGTCCACTGCCTGGGATTTGT...AACAAATTCTCCTTTAAAACCTTCAGAAAGGAACAAAGCCCTATCAACTTCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469450.1
CDS-3UTR CCA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTAACAGCCAAAAGATCTaGATTTGTTTTATTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGNSQKI*ICFIPG
Trigger: GCCTGGAATAAAACAAATCCAGATCTTTTGGCTGTT...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp ACATCTTTATTCTTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATATCTGATTGGTTTGACTTaGATCCAAGCAAAGTATCCA +
Preference number: 4 (lower is better)
Translates to: TSLFFGAPLKVCIILSTYLIGLT*IQAKYP
Trigger: TGGATACTTTGCTTGGATCCAAGTCAAACCAATCAG...ATATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAAAGATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR TCA 90 bp CAAGAAGTTGATAGGGCTTTGTTCCTTTCTGAAGGTTTTAAAGGAGAATTTGTTCAAGTTGAAATAAGATaGTCAGCCTTCAGAAAAAGG +
Preference number: 4 (lower is better)
Translates to: QEVDRALFLSEGFKGEFVQVEIR*SAFRKR
Trigger: CCTTTTTCTGAAGGCTGATCATCTTATTTCAACTTG...AACAAATTCTCCTTTAAAACCTTCAGAAAGGAACAAAGCCCTATCAACTTCTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469450.1
CDS-3UTR GCA 90 bp GAATTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTGCTCCATTGAAAGTCTaGATCATCCTTTCAACATAT +
Preference number: 4 (lower is better)
Translates to: EFFSLNWECDKRWSNHKIAPLKV*IILSTY
Trigger: ATATGTTGAAAGGATGATGCAGACTTTCAATGGAGC...AATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAATTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp CAAGAAGTTGATAGGGCTTTGTTCCTTTCTGAAGGTTTTAAAGGAGAATTTGTTGCTCCATTGAAAGTCTaGATCATCCTTTCAACATAT +
Preference number: 4 (lower is better)
Translates to: QEVDRALFLSEGFKGEFVAPLKV*IILSTY
Trigger: ATATGTTGAAAGGATGATGCAGACTTTCAATGGAGC...AACAAATTCTCCTTTAAAACCTTCAGAAAGGAACAAAGCCCTATCAACTTCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469450.1
CDS-3UTR GCA 90 bp TTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTCTGATCTTTATTCTTTGGTaGTCCATTGAAAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: FFSLNWECDKRWSNHKILIFILW*SIESLH
Trigger: ATGCAGACTTTCAATGGAGCACCAAAGAATAAAGAT...CAGAATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTATCTTTATTCTTTGGTaGTCCATTGAAAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGIFILW*SIESLH
Trigger: ATGCAGACTTTCAATGGAGCACCAAAGAATAAAGAT...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp ACATCTTTATTCTTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATATTTGACATTCTCCTGTTaGCATATAATAACACCCCAA +
Preference number: 4 (lower is better)
Translates to: TSLFFGAPLKVCIILSTYLTFSC*HIITPQ
Trigger: TTGGGGTGTTATTATATGGCAACAGGAGAATGTCAA...ATATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAAAGATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CCA 90 bp AACATCTTTATTCTTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATATGTCAAGAGTTTACTTaGTTTTGCTGTACCAGTAAG +
Preference number: 4 (lower is better)
Translates to: NIFILWCSIESLHHPFNICQEFT*FCCTSK
Trigger: CTTACTGGTACAGCAAAACCAAGTAAACTCTTGACA...TATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAAAGATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491297.6
ENST00000531980.5
CDS-3UTR CCA 90 bp AAGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGGATAAGCTGCAAGTTTaGGCTGAAATATATTTTCCA +
Preference number: 4 (lower is better)
Translates to: KGLVQTNGVYEAMDTCKRDKLQV*AEIYFP
Trigger: TGGAAAATATATTTCAGCCCAAACTTGCAGCTTATC...CCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp AAGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGAGATATTTGTGTCCTTaGGATGAAAAGCAAAACACA +
Preference number: 4 (lower is better)
Translates to: KGLVQTNGVYEAMDTCKRRYLCP*DEKQNT
Trigger: TGTGTTTTGCTTTTCATCCCAAGGACACAAATATCT...CCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp TTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTCTGAACAACAGAAGTAGCTaGATAAAAACTCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: FFSLNWECDKRWSNHKILNNRSS*IKTQRW
Trigger: CCATCTTTGAGTTTTTATCCAGCTACTTCTGTTGTT...CAGAATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTACAAACTGCATAGAATaGCCTGTTAGCAATGAATAT +
Preference number: 4 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGTNCIE*PVSNEY
Trigger: ATATTCATTGCTAACAGGCCATTCTATGCAGTTTGT...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CCA 90 bp TTATTCTTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATATAGGTCAACAAACTGCATAGAATaGCCTGTTAGCAATGAATAT +
Preference number: 4 (lower is better)
Translates to: LFFGAPLKVCIILSTYRSTNCIE*PVSNEY
Trigger: ATATTCATTGCTAACAGGCCATTCTATGCAGTTTGT...TGACCTATATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
3UTR CAA 72 bp ATCCATGTAAAATTTGCCTTGCTTTTGTTTAAGGGATaGGTCCAAACAAATGGAGTTTATGAAGCAATGGAT +
Preference number: 4 (lower is better)
Translates to: IHVKFALLLFKG*VQTNGVYEAMD
Trigger: ATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCTTAAACAAAAGCAAGGCAAATTTTACATGGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR GCA 90 bp GATAGGGCTTTGTTCCTTTCTGAAGGTTTTAAAGGAGAATTTGTTTCCTTGATTATCTTTATTCTTTGGTaGTCCATTGAAAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: DRALFLSEGFKGEFVSLIIFILW*SIESLH
Trigger: ATGCAGACTTTCAATGGAGCACCAAAGAATAAAGAT...AATCAAGGAAACAAATTCTCCTTTAAAACCTTCAGAAAGGAACAAAGCCCTATC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469450.1
CDS-3UTR CCA 90 bp CAAGAAGTTGATAGGGCTTTGTTCCTTTCTGAAGGTTTTAAAGGAGAATTTGTTAACATCTTTATTCTTTaGTGCTCCATTGAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: QEVDRALFLSEGFKGEFVNIFIL*CSIESL
Trigger: CAGACTTTCAATGGAGCACCAAAGAATAAAGATGTT...AACAAATTCTCCTTTAAAACCTTCAGAAAGGAACAAAGCCCTATCAACTTCTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469450.1
CDS GCA 90 bp GATGTCTCATGCCTCCAACCCGAAGTTCTGCTGCTTGTGACTGCCTaGCGGAGAGACTGGCATGGTGGCGACCAGCTGGGGAGTGGTGCA +
Preference number: 5 (lower is better)
Translates to: DVSCLQPEVLLLVTA*RRDWHGGDQLGSGA
Trigger: TGCACCACTCCCCAGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTTCGGGTTGGAGGCATGAGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS CCA 90 bp CTCCAACCCGAAGTTCTGCTGCTTGTGACTGCCTGCCGGAGAGACTaGCATGGTGGCGACCAGCTGGGGAGTGGTGCACCACCCCTTTTT +
Preference number: 5 (lower is better)
Translates to: LQPEVLLLVTACRRD*HGGDQLGSGAPPLF
Trigger: AAAAAGGGGTGGTGCACCACTCCCCAGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTTCGGGTTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS CCA 90 bp GTTCAACCCGAAGTTCTGCTGCTTGTGACTGCCTGCCGGAGAGACTaGCATGGTGGCGACCAGCTGGGGAGTGGTGCACCACCCCTTTTT +
Preference number: 5 (lower is better)
Translates to: VQPEVLLLVTACRRD*HGGDQLGSGAPPLF
Trigger: AAAAAGGGGTGGTGCACCACTCCCCAGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTTCGGGTTGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371022.3
ENST00000371023.7
ENST00000371026.8
CDS GCA 90 bp TTGTGTGGCATTGTTCAACCCGAAGTTCTGCTGCTTGTGACTGCCTaGCGGAGAGACTGGCATGGTGGCGACCAGCTGGGGAGTGGTGCA +
Preference number: 5 (lower is better)
Translates to: LCGIVQPEVLLLVTA*RRDWHGGDQLGSGA
Trigger: TGCACCACTCCCCAGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTTCGGGTTGAACAATGCCACACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371022.3
ENST00000371023.7
ENST00000371026.8
CDS GCA 90 bp TTGGTTGTGTGGCATTGTTCAACCCGAAGTTCTGCTGCTTGTGACTaGCTGCCGGAGAGACTGGCATGGTGGCGACCAGCTGGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: LVVWHCSTRSSAACD*LPERLAWWRPAGEW
Trigger: CCACTCCCCAGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTTCGGGTTGAACAATGCCACACAACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371022.3
ENST00000371023.7
ENST00000371026.8
CDS GCA 90 bp TGCTGTACCAGTAAGTGGATAACCCGAAGTTCTGCTGCTTGTGACTaGCTGCCGGAGAGACTGGCATGGTGGCGACCAGCTGGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: CCTSKWITRSSAACD*LPERLAWWRPAGEW
Trigger: CCACTCCCCAGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTTCGGGTTATCCACTTACTGGTACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531980.5
CDS TCA 90 bp TTCTTTGGTTGTGTGGCATTGTTCAACCCGAAGTTCTGCTGCTTGTaGCTGCCTGCCGGAGAGACTGGCATGGTGGCGACCAGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: FFGCVALFNPKFCCL*LPAGETGMVATSWG
Trigger: TCCCCAGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTTCGGGTTGAACAATGCCACACAACCAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371022.3
ENST00000371023.7
ENST00000371026.8
CDS-3UTR CAA 90 bp CTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTGAGGCTCCGGAATGTTaGCCGGGCGTCATGGCGACG +
Preference number: 5 (lower is better)
Translates to: LSSPLHLECFIEQPIMSCEAPEC*PGVMAT
Trigger: CGTCGCCATGACGCCCGGCAAACATTCCGGAGCCTC...ACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR CAA 90 bp CCCCTCCCTGCTTCAAGTTGTCCCTGCCTTTCTGGATGGAACCAATGTACTTCTCCTCCCTGCTTCAAGTaGTCCCTGCCTTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: PLPASSCPCLSGWNQCTSPPCFK*SLPFWM
Trigger: CATCCAGAAAGGCAGGGACAACTTGAAGCAGGGAGG...AGAAGTACATTGGTTCCATCCAGAAAGGCAGGGACAACTTGAAGCAGGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR CAA 90 bp GTTAAGTGCACAAGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTGAGGCTCCGGAATGTTaGCCGGGCGTCATGGCGACG +
Preference number: 5 (lower is better)
Translates to: VKCTSSRTRTVSKLLFACEAPEC*PGVMAT
Trigger: CGTCGCCATGACGCCCGGCAAACATTCCGGAGCCTC...ACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCTTGTGCACTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CAA 90 bp TGGTTGTGTGGCATTGTTCCTGTGACCTGGAAGCCCCCTCCCTGCTTCAAGTTGGGAATAAGCACGGTTTaGGACACAGCCATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: WLCGIVPVTWKPPPCFKLGISTV*DTAILL
Trigger: AAGCAGAATGGCTGTGTCCAAAACCGTGCTTATTCC...CAACTTGAAGCAGGGAGGGGGCTTCCAGGTCACAGGAACAATGCCACACAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR CAA 90 bp CTGTTAGCAATGAATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTTGCAGTGAGCCAAGATaGCACTCCAGTCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: LLAMNIWRSHCSPSPPRFCSEPR*HSSLGD
Trigger: GTCACCCAGACTGGAGTGCAATCTTGGCTCACTGCA...AAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATATTCATTGCTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CAA 90 bp TGTGGCATTGTTCCTGTGACCTGGAAGCCCCCTCCCTGCTTCAAGTTGTCCCTGAATAGACTTCTTTGGTaGTGTGGCATTGTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: CGIVPVTWKPPPCFKLSLNRLLW*CGIVPV
Trigger: CACAGGAACAATGCCACACAACCAAAGAAGTCTATT...CAGGGACAACTTGAAGCAGGGAGGGGGCTTCCAGGTCACAGGAACAATGCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR CAA 90 bp ATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTCCGCAACCTTGCTGCTGATTGGTTTGACTaGGATCCAAGCAAAGTATCC +
Preference number: 5 (lower is better)
Translates to: IFGGVTAPHLHPDFRNLAADWFD*DPSKVS
Trigger: GGATACTTTGCTTGGATCCAAGTCAAACCAATCAGC...AGCAAGGTTGCGGAAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS GCA 90 bp GGCCACCACAACCTTTCCTTCATCTTCAAAGACAGCAACATTGATTaGATTCCCGCTGACCTTCTTCTGTCATCACGTCTCTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: GHHNLSFIFKDSNID*IPADLLLSSRLSPR
Trigger: TCTGGGAGAGAGACGTGATGACAGAAGAAGGTCAGCGGGAATGCAATCAATGTTGCTGTCTTTGAAGATGAAGGAAAGGTTGTGGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469450.1
CDS-3UTR CAA 90 bp CCCCTCCCTGCTTCAAGTTGTCCCTGCCTTTCTGGATGGAACCAATGTACTTCTCACAGCCATTCTGCTTaGATTTGCACCAGTATATCC +
Preference number: 5 (lower is better)
Translates to: PLPASSCPCLSGWNQCTSHSHSA*ICTSIS
Trigger: GGATATACTGGTGCAAATCAAAGCAGAATGGCTGTG...AGAAGTACATTGGTTCCATCCAGAAAGGCAGGGACAACTTGAAGCAGGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR CAA 90 bp ATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTCCGCAACCTTGCTTTTTGCCATCTCCTGTaGTTCCTCGATCTTGTTCTA +
Preference number: 5 (lower is better)
Translates to: IFGGVTAPHLHPDFRNLAFCHLL*FLDLVL
Trigger: TAGAACAAGATCGAGGAACAACAGGAGATGGCAAAA...AGCAAGGTTGCGGAAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp GATATTCCCCTGGTAATTCTCTTGAAGCGACTTCACAAGCCAGCATTTGGAAATAGAGAGGAGAATTGCTaGAACCCAGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: DIPLVILLKRLHKPAFGNREENC*NPGGGG
Trigger: ACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTCTCT...ATTTCCAAATGCTGGCTTGTGAAGTCGCTTCAAGAGAATTACCAGGGGAATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS GCA 90 bp TGGATGGAACCAATGTACTTCTTACATATATTGATTGATGTCTCATaGCTCCAACCCGAAGTTCTGCTGCTTGTGACTGCCTGCCGGAGA +
Preference number: 5 (lower is better)
Translates to: WMEPMYFLHILIDVS*LQPEVLLLVTACRR
Trigger: TCTCCGGCAGGCAGTCACAAGCAGCAGAACTTCGGGTTGGAGGCATGAGACATCAATCAATATATGTAAGAAGTACATTGGTTCCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS-3UTR CAA 90 bp CTGTTAGCAATGAATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTCCAGGTCTTCTGCTATaGATTCACTTGCTGATACAC +
Preference number: 5 (lower is better)
Translates to: LLAMNIWRSHCSPSPPRFPGLLL*IHLLIH
Trigger: GTGTATCAGCAAGTGAATCAATAGCAGAAGACCTGG...AAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATATTCATTGCTAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp ATGCTGATTGGTTTGACTTGGATCCAAGCAAAGTATCCATTATATCTCCCCGGCGCTCCCTGGCAATCTTaGGTCCTGATCTTTAGGAAG +
Preference number: 5 (lower is better)
Translates to: MLIGLTWIQAKYPLYLPGAPWQS*VLIFRK
Trigger: CTTCCTAAAGATCAGGACCAAAGATTGCCAGGGAGC...GCCGGGGAGATATAATGGATACTTTGCTTGGATCCAAGTCAAACCAATCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CAA 90 bp ATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTCCGCAACCTTGCTCTTTTGTTTAAGGGATaGGTCCAAACAAATGGAGTT +
Preference number: 5 (lower is better)
Translates to: IFGGVTAPHLHPDFRNLALLFKG*VQTNGV
Trigger: AACTCCATTTGTTTGGACCAATCCCTTAAACAAAAG...AGCAAGGTTGCGGAAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp CTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTGTTAGCAATGAATATTaGGAGGAGTCACTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: LSSPLHLECFIEQPIMSCVSNEY*EESLLP
Trigger: GGGGAGCAGTGACTCCTCCAAATATTCATTGCTAAC...ACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp CAAGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTTTCCTCATCTGGAATAAGCACGGTTTaGGACACAGCCATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: QALEPEQLANFSLPVSSSGISTV*DTAILL
Trigger: AAGCAGAATGGCTGTGTCCAAAACCGTGCTTATTCC...AGATGAGGAAACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CAA 90 bp CTGTTAGCAATGAATATTTGGAGGAGTCACTGCTCCCCATCTCCACCCCGATTTTGCTGCCCTTATAACTaGCAAATCTGTGAAACTAGT +
Preference number: 5 (lower is better)
Translates to: LLAMNIWRSHCSPSPPRFCCPYN*QICETS
Trigger: ACTAGTTTCACAGATTTGCAAGTTATAAGGGCAGCA...AAATCGGGGTGGAGATGGGGAGCAGTGACTCCTCCAAATATTCATTGCTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR CAA 90 bp CACCCTACAGATTTTGGCTATGCAATGTGCTCAGGGTTGTTAATTTGTACACAGCACAGCCATTCTGCTTaGATTTGCACCAGTATATCC +
Preference number: 5 (lower is better)
Translates to: HPTDFGYAMCSGLLICTQHSHSA*ICTSIS
Trigger: GGATATACTGGTGCAAATCAAAGCAGAATGGCTGTG...CTGTGTACAAATTAACAACCCTGAGCACATTGCATAGCCAAAATCTGTAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CAA 90 bp CAAGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTTTCCTCATCTCCAGGTCTTCTGCTATaGATTCACTTGCTGATACAC +
Preference number: 5 (lower is better)
Translates to: QALEPEQLANFSLPVSSSPGLLL*IHLLIH
Trigger: GTGTATCAGCAAGTGAATCAATAGCAGAAGACCTGG...AGATGAGGAAACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CAA 90 bp CTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTTTCTTTGGTGCTCCATaGAAAGTCTGCATCATCCTT +
Preference number: 5 (lower is better)
Translates to: LSSPLHLECFIEQPIMSCFFGAP*KVCIIL
Trigger: AAGGATGATGCAGACTTTCAATGGAGCACCAAAGAA...ACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp CTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTCCAAAAGATCTGGATTaGTTTTATTCCAGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: LSSPLHLECFIEQPIMSCPKDLD*FYSRQG
Trigger: GCCTTGCCTGGAATAAAACAAATCCAGATCTTTTGG...ACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp GCAAGGCTGCTCACATTGAGGCCTTTGGTTAAGTCACAGGAAAAAGACCAAAGTACTAGTATTTCTCTTTaGCCATCTCCTGTTGTTCCT +
Preference number: 5 (lower is better)
Translates to: ARLLTLRPLVKSQEKDQSTSISL*PSPVVP
Trigger: AGGAACAACAGGAGATGGCAAAAGAGAAATACTAGT...ACTTTGGTCTTTTTCCTGTGACTTAACCAAAGGCCTCAATGTGAGCAGCCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CAA 90 bp GCAAGGCTGCTCACATTGAGGCCTTTGGTTAAGTCACAGGAAAAAGACCAAAGTTTTCGTATAACCCATTaGGAGATTCTTCCATCTGCT +
Preference number: 5 (lower is better)
Translates to: ARLLTLRPLVKSQEKDQSFRITH*EILPSA
Trigger: AGCAGATGGAAGAATCTCCAAATGGGTTATACGAAA...ACTTTGGTCTTTTTCCTGTGACTTAACCAAAGGCCTCAATGTGAGCAGCCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CAA 90 bp TTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTGGCCTCAGTTTAACCCAGCTTGACATTCTCCTGTaGCCATATAATAACACCCCA +
Preference number: 5 (lower is better)
Translates to: LECFIEQPIMSCGLSLTQLDILL*PYNNTP
Trigger: TGGGGTGTTATTATATGGCAACAGGAGAATGTCAAG...CTGGGTTAAACTGAGGCCACAGGACATGATGGGCTGTTCTATAAAGCATTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp CTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTATATATAGGATGATTTaGGAGACCAGGCAACGTCGT +
Preference number: 5 (lower is better)
Translates to: LSSPLHLECFIEQPIMSCIYRMI*ETRQRR
Trigger: ACGACGTTGCCTGGTCTCCAAAATCATCCTATATAT...ACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp GATATTCCCCTGGTAATTCTCTTGAAGCGACTTCACAAGCCAGCATTTGGAAATGCTGATTGGTTTGACTaGGATCCAAGCAAAGTATCC +
Preference number: 5 (lower is better)
Translates to: DIPLVILLKRLHKPAFGNADWFD*DPSKVS
Trigger: GGATACTTTGCTTGGATCCAAGTCAAACCAATCAGC...ATTTCCAAATGCTGGCTTGTGAAGTCGCTTCAAGAGAATTACCAGGGGAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CAA 90 bp CCCTACAGATTTTGGCTATGCAATGTGCTCAGGGTTGTTAATTTGTACACAGTGCTCAGGGTTGTTAATTaGTACACAGTGAGAGGTGGT +
Preference number: 5 (lower is better)
Translates to: PYRFWLCNVLRVVNLYTVLRVVN*YTVRGG
Trigger: ACCACCTCTCACTGTGTACAAATTAACAACCCTGAG...CACTGTGTACAAATTAACAACCCTGAGCACATTGCATAGCCAAAATCTGTAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CAA 90 bp CACCCTACAGATTTTGGCTATGCAATGTGCTCAGGGTTGTTAATTTGTACACAGTACACCCTACAGATTTaGGCTATGCAATGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: HPTDFGYAMCSGLLICTQYTLQI*AMQCAQ
Trigger: CTGAGCACATTGCATAGCCAAAATCTGTAGGGTGTA...CTGTGTACAAATTAACAACCCTGAGCACATTGCATAGCCAAAATCTGTAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CAA 90 bp AATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCTTTGAGGTCAGAAGTTaGAAACCAGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: NFICPIVSSPLRMLYRTAFEVRS*KPAWPT
Trigger: TGTTGGCCAGGCTGGTTTCAAACTTCTGACCTCAAA...GGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CAA 90 bp CCCTACAGATTTTGGCTATGCAATGTGCTCAGGGTTGTTAATTTGTACACAGTGAATAGACTTCTTTGGTaGTGTGGCATTGTTCAACCC +
Preference number: 5 (lower is better)
Translates to: PYRFWLCNVLRVVNLYTVNRLLW*CGIVQP
Trigger: GGGTTGAACAATGCCACACAACCAAAGAAGTCTATT...CACTGTGTACAAATTAACAACCCTGAGCACATTGCATAGCCAAAATCTGTAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CAA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATGGAATAAGCACGGTTTaGGACACAGCCATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDGISTV*DTAILL
Trigger: AAGCAGAATGGCTGTGTCCAAAACCGTGCTTATTCC...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp CCCTACAGATTTTGGCTATGCAATGTGCTCAGGGTTGTTAATTTGTACACAGTGTTCTTTGGTGCTCCATaGAAAGTCTGCATCATCCTT +
Preference number: 5 (lower is better)
Translates to: PYRFWLCNVLRVVNLYTVFFGAP*KVCIIL
Trigger: AAGGATGATGCAGACTTTCAATGGAGCACCAAAGAA...CACTGTGTACAAATTAACAACCCTGAGCACATTGCATAGCCAAAATCTGTAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CAA 90 bp TCTGACTGTGAAACTAGTCAATCTTTCCCGTTTATAGGATGGTTCTTCCAGGTCTTCTTTGGTGCTCCATaGAAAGTCTGCATCATCCTT +
Preference number: 5 (lower is better)
Translates to: SDCETSQSFPFIGWFFQVFFGAP*KVCIIL
Trigger: AAGGATGATGCAGACTTTCAATGGAGCACCAAAGAA...GACCTGGAAGAACCATCCTATAAACGGGAAAGATTGACTAGTTTCACAGTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531980.5
CDS-3UTR CAA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTGCTCCCTGGCAATCTTaGGTCCTGATCTTTAGGAAG +
Preference number: 5 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGAPWQS*VLIFRK
Trigger: CTTCCTAAAGATCAGGACCAAAGATTGCCAGGGAGC...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp TTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATATAGGTCATTGCCTCCAAGTTGGCGGGTATaGTTGATTCTTCTGCATGTA +
Preference number: 5 (lower is better)
Translates to: FGAPLKVCIILSTYRSLPPSWRV*LILLHV
Trigger: TACATGCAGAAGAATCAACAATACCCGCCAACTTGG...AGGCAATGACCTATATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CAA 90 bp GATATTCCCCTGGTAATTCTCTTGAAGCGACTTCACAAGCCAGCATTTGGAAATTTTTGCCATCTCCTGTaGTTCCTCGATCTTGTTCTA +
Preference number: 5 (lower is better)
Translates to: DIPLVILLKRLHKPAFGNFCHLL*FLDLVL
Trigger: TAGAACAAGATCGAGGAACAACAGGAGATGGCAAAA...ATTTCCAAATGCTGGCTTGTGAAGTCGCTTCAAGAGAATTACCAGGGGAATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CAA 90 bp AGGCATATTTCTCAGTTCATACACAGAAACCTGTCCATCACTGTCTCCTACCAGCAGCCAAATAGATATTaGTGTCCTTGGGATGAAAAG +
Preference number: 5 (lower is better)
Translates to: RHISQFIHRNLSITVSYQQPNRY*CPWDEK
Trigger: CTTTTCATCCCAAGGACACAAATATCTATTTGGCTG...CTGGTAGGAGACAGTGATGGACAGGTTTCTGTGTATGAACTGAGAAATATGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CAA 90 bp TCACAGGAAAAAGACCAAAGTCGTTCCAAGTTGGCGGGTATTGTTGATTCTTCTCAGAAGGCAATCTGTTaGTTTGGCAAAGAGAATGGT +
Preference number: 5 (lower is better)
Translates to: SQEKDQSRSKLAGIVDSSQKAIC*FGKENG
Trigger: ACCATTCTCTTTGCCAAACAAACAGATTGCCTTCTG...AGAAGAATCAACAATACCCGCCAACTTGGAACGACTTTGGTCTTTTTCCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CAA 90 bp TTAGTGAATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGACCCCTGGTAATTCTCTaGAAGCGACTTCACAAGCCA +
Preference number: 5 (lower is better)
Translates to: LVNFICPIVSSPLRMLYRPLVIL*KRLHKP
Trigger: TGGCTTGTGAAGTCGCTTCAAGAGAATTACCAGGGG...TCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CAA 90 bp TTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATATAGGTCATTGCCTTTCTTTGGTGCTCCATaGAAAGTCTGCATCATCCTT +
Preference number: 5 (lower is better)
Translates to: FGAPLKVCIILSTYRSLPFFGAP*KVCIIL
Trigger: AAGGATGATGCAGACTTTCAATGGAGCACCAAAGAA...AGGCAATGACCTATATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491297.6
ENST00000531980.5
CDS-3UTR CAA 90 bp CTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATCATGTCCTGTCATTTGCTTTACTACTaGACTCAACCACAGATTGTT +
Preference number: 5 (lower is better)
Translates to: LSSPLHLECFIEQPIMSCHLLYY*TQPQIV
Trigger: AACAATCTGTGGTTGAGTCAAGTAGTAAAGCAAATG...ACAGGACATGATGGGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp CAAGAAGTTGATAGGGCTTTGTTCCTTTCTGAAGGTTTTAAAGGAGAATTTGTTGCTCCCTGGCAATCTTaGGTCCTGATCTTTAGGAAG +
Preference number: 5 (lower is better)
Translates to: QEVDRALFLSEGFKGEFVAPWQS*VLIFRK
Trigger: CTTCCTAAAGATCAGGACCAAAGATTGCCAGGGAGC...AACAAATTCTCCTTTAAAACCTTCAGAAAGGAACAAAGCCCTATCAACTTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469450.1
CDS-3UTR CAA 90 bp ATGCTGATTGGTTTGACTTGGATCCAAGCAAAGTATCCATTATATCTCCCCGGCTGTCAGATTTTAATATaGCATCTGAGTGGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: MLIGLTWIQAKYPLYLPGCQILI*HLSGLP
Trigger: AGGAAGACCACTCAGATGCAATATTAAAATCTGACA...GCCGGGGAGATATAATGGATACTTTGCTTGGATCCAAGTCAAACCAATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CAA 90 bp GATATTCCCCTGGTAATTCTCTTGAAGCGACTTCACAAGCCAGCATTTGGAAATAGCCAGTCCTCTTTTTaGCTCTTTAAATCCAAAGTG +
Preference number: 5 (lower is better)
Translates to: DIPLVILLKRLHKPAFGNSQSSF*LFKSKV
Trigger: CACTTTGGATTTAAAGAGCAAAAAAGAGGACTGGCT...ATTTCCAAATGCTGGCTTGTGAAGTCGCTTCAAGAGAATTACCAGGGGAATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CAA 90 bp AATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCATATATAGGATGATTTaGGAGACCAGGCAACGTCGT +
Preference number: 5 (lower is better)
Translates to: NFICPIVSSPLRMLYRTAIYRMI*ETRQRR
Trigger: ACGACGTTGCCTGGTCTCCAAAATCATCCTATATAT...GGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp CAAGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTTTCCTCATCTAGTGTCCAACTACTGTaGTGGTTTGGCCAAATTATT +
Preference number: 5 (lower is better)
Translates to: QALEPEQLANFSLPVSSSSVQLL*WFGQII
Trigger: AATAATTTGGCCAAACCACAACAGTAGTTGGACACT...AGATGAGGAAACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS CCA 90 bp GAGAATTTTGTCAACAGCCAGATAAAAATGCTTCTTATTCTTGTTTaGGTTACCATGGGATTCTTTATTGACCAGCAGCAAGCCAGTCCT +
Preference number: 5 (lower is better)
Translates to: ENFVNSQIKMLLILV*VTMGFFIDQQQASP
Trigger: AGGACTGGCTTGCTGCTGGTCAATAAAGAATCCCATGGTAACCCAAACAAGAATAAGAAGCATTTTTATCTGGCTGTTGACAAAATTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371023.7
ENST00000531552.1
CDS-3UTR CAA 90 bp AGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTTTCCTCATCTATCCATTCTGCTTTGATTaGCACCAGTATATCCTTTCA +
Preference number: 5 (lower is better)
Translates to: SSRTRTVSKLLFACFLIYPFCFD*HQYILS
Trigger: TGAAAGGATATACTGGTGCAAATCAAAGCAGAATGG...ATAGATGAGGAAACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CAA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTCACAGCCATTCTGCTTaGATTTGCACCAGTATATCC +
Preference number: 5 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGHSHSA*ICTSIS
Trigger: GGATATACTGGTGCAAATCAAAGCAGAATGGCTGTG...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR CAA 90 bp GAATTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTGGAATAAGCACGGTTTaGGACACAGCCATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: EFFSLNWECDKRWSNHKIGISTV*DTAILL
Trigger: AAGCAGAATGGCTGTGTCCAAAACCGTGCTTATTCC...AATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp TTAGTGAATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGACCAGGTCTTCTGCTATaGATTCACTTGCTGATACAC +
Preference number: 5 (lower is better)
Translates to: LVNFICPIVSSPLRMLYRPGLLL*IHLLIH
Trigger: GTGTATCAGCAAGTGAATCAATAGCAGAAGACCTGG...TCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATTCACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp TTGAACATCTTTATTCTTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACCCAGGTCTTCTGCTATaGATTCACTTGCTGATACAC +
Preference number: 5 (lower is better)
Translates to: LNIFILWCSIESLHHPFNPGLLL*IHLLIH
Trigger: GTGTATCAGCAAGTGAATCAATAGCAGAAGACCTGG...GTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAAAGATGTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491297.6
ENST00000531980.5
CDS-3UTR CAA 90 bp AGCTCTAGAACCAGAACAGTTAGCAAACTTCTCTTTGCCTGTTTCCTCATCTATTGCTGCCCTTATAACTaGCAAATCTGTGAAACTAGT +
Preference number: 5 (lower is better)
Translates to: SSRTRTVSKLLFACFLIYCCPYN*QICETS
Trigger: ACTAGTTTCACAGATTTGCAAGTTATAAGGGCAGCA...ATAGATGAGGAAACAGGCAAAGAGAAGTTTGCTAACTGTTCTGGTTCTAGAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371022.3
CDS-3UTR CAA 90 bp AAGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGCAAAGTCGTTCCAAGTaGGCGGGTATTGTTGATTCT +
Preference number: 5 (lower is better)
Translates to: KGLVQTNGVYEAMDTCKRQSRSK*AGIVDS
Trigger: AGAATCAACAATACCCGCCAACTTGGAACGACTTTG...CCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS GCA 90 bp GTTTTTGAGGTGATTCACTACTATCCAGAACTGGAACATTACTGTTaGTCCGTACATTGTAAATTGCAATTGTGCCATTGTGATAGCCAA +
Preference number: 5 (lower is better)
Translates to: VFEVIHYYPELEHYC*SVHCKLQLCHCDSQ
Trigger: TTGGCTATCACAATGGCACAATTGCAATTTACAATGTACGGAGCAACAGTAATGTTCCAGTTCTGGATAGTAGTGAATCACCTCAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000464352.6
CDS-3UTR CAA 90 bp TTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTCTGAATAGACTTCTTTGGTaGTGTGGCATTGTTCAACCC +
Preference number: 5 (lower is better)
Translates to: FFSLNWECDKRWSNHKILNRLLW*CGIVQP
Trigger: GGGTTGAACAATGCCACACAACCAAAGAAGTCTATT...CAGAATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR CAA 90 bp AATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACAGCCCATTTGCTTTACTACTaGACTCAACCACAGATTGTT +
Preference number: 5 (lower is better)
Translates to: NFICPIVSSPLRMLYRTAHLLYY*TQPQIV
Trigger: AACAATCTGTGGTTGAGTCAAGTAGTAAAGCAAATG...GGCTGTTCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp GAATTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTCCAAGTTGGCGGGTATaGTTGATTCTTCTGCATGTA +
Preference number: 5 (lower is better)
Translates to: EFFSLNWECDKRWSNHKIPSWRV*LILLHV
Trigger: TACATGCAGAAGAATCAACAATACCCGCCAACTTGG...AATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp AACATCTTTATTCTTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATACAAAGTCGTTCCAAGTaGGCGGGTATTGTTGATTCT +
Preference number: 5 (lower is better)
Translates to: NIFILWCSIESLHHPFNIQSRSK*AGIVDS
Trigger: AGAATCAACAATACCCGCCAACTTGGAACGACTTTG...TATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAAAGATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CAA 90 bp AAGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGCTCACATTGAGGCCTTaGGTTAAGTCACAGGAAAAA +
Preference number: 5 (lower is better)
Translates to: KGLVQTNGVYEAMDTCKRLTLRP*VKSQEK
Trigger: TTTTTCCTGTGACTTAACCAAAGGCCTCAATGTGAG...CCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp TTGAACATCTTTATTCTTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACCTCACATTGAGGCCTTaGGTTAAGTCACAGGAAAAA +
Preference number: 5 (lower is better)
Translates to: LNIFILWCSIESLHHPFNLTLRP*VKSQEK
Trigger: TTTTTCCTGTGACTTAACCAAAGGCCTCAATGTGAG...GTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAAAGATGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CAA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATAGCCAGTCCTCTTTTTaGCTCTTTAAATCCAAAGTG +
Preference number: 5 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDSQSSF*LFKSKV
Trigger: CACTTTGGATTTAAAGAGCAAAAAAGAGGACTGGCT...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATTTTCGTATAACCCATTaGGAGATTCTTCCATCTGCT +
Preference number: 5 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDFRITH*EILPSA
Trigger: AGCAGATGGAAGAATCTCCAAATGGGTTATACGAAA...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp TTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTCTGAGAATGGTTGTGAACTaGATTCCAGGGTTAGCAGTA +
Preference number: 5 (lower is better)
Translates to: FFSLNWECDKRWSNHKILRMVVN*IPGLAV
Trigger: TACTGCTAACCCTGGAATCAAGTTCACAACCATTCT...CAGAATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp TTAGTGAATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGACAGAAGGCAATCTGTTaGTTTGGCAAAGAGAATGGT +
Preference number: 5 (lower is better)
Translates to: LVNFICPIVSSPLRMLYRQKAIC*FGKENG
Trigger: ACCATTCTCTTTGCCAAACAAACAGATTGCCTTCTG...TCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATTCACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp AACAGAAGTAGCTGGATAAAAACTCAAAGATGGCTTGACATTCTCCTGTTGCCACTTTTGTTTAAGGGATaGGTCCAAACAAATGGAGTT +
Preference number: 5 (lower is better)
Translates to: NRSSWIKTQRWLDILLLPLLFKG*VQTNGV
Trigger: AACTCCATTTGTTTGGACCAATCCCTTAAACAAAAG...TGGCAACAGGAGAATGTCAAGCCATCTTTGAGTTTTTATCCAGCTACTTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CAA 90 bp GATAGGGCTTTGTTCCTTTCTGAAGGTTTTAAAGGAGAATTTGTTTCCTTGATTTTCTTTGGTGCTCCATaGAAAGTCTGCATCATCCTT +
Preference number: 5 (lower is better)
Translates to: DRALFLSEGFKGEFVSLIFFGAP*KVCIIL
Trigger: AAGGATGATGCAGACTTTCAATGGAGCACCAAAGAA...AATCAAGGAAACAAATTCTCCTTTAAAACCTTCAGAAAGGAACAAAGCCCTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469450.1
CDS-3UTR CAA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATCATTGTAAATTGCAATaGTGCCATTGTGATAGCCAA +
Preference number: 5 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDHCKLQ*CHCDSQ
Trigger: TTGGCTATCACAATGGCACAATTGCAATTTACAATG...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR CAA 90 bp GAGTTTATGAAGCAATGGATACTTGTAAAAGGTAGTTCCCACTGTTGCACTGATTCCGTACATTGTAAATaGCAATTGTGCCATTGTGAT +
Preference number: 5 (lower is better)
Translates to: EFMKQWILVKGSSHCCTDSVHCK*QLCHCD
Trigger: ATCACAATGGCACAATTGCAATTTACAATGTACGGA...ATCAGTGCAACAGTGGGAACTACCTTTTACAAGTATCCATTGCTTCATAAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS-3UTR CAA 90 bp TTAGTGAATTTCATATGCCCTATCGTCTCCTCTCCACTTAGAATGCTTTATAGAACTAGTATTTCTCTTTaGCCATCTCCTGTTGTTCCT +
Preference number: 5 (lower is better)
Translates to: LVNFICPIVSSPLRMLYRTSISL*PSPVVP
Trigger: AGGAACAACAGGAGATGGCAAAAGAGAAATACTAGT...TCTATAAAGCATTCTAAGTGGAGAGGAGACGATAGGGCATATGAAATTCACTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTCAGCCAAATAGATATTaGTGTCCTTGGGATGAAAAG +
Preference number: 5 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGQPNRY*CPWDEK
Trigger: CTTTTCATCCCAAGGACACAAATATCTATTTGGCTG...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp GAATTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTCTTGACATTCTCCTGTaGCCATATAATAACACCCCA +
Preference number: 5 (lower is better)
Translates to: EFFSLNWECDKRWSNHKILDILL*PYNNTP
Trigger: TGGGGTGTTATTATATGGCAACAGGAGAATGTCAAG...AATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp AAGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGATTATGCTGATTGGTTaGACTTGGATCCAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: KGLVQTNGVYEAMDTCKRIMLIG*TWIQAK
Trigger: CTTTGCTTGGATCCAAGTCAAACCAATCAGCATAAT...CCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp GTTGATAGGGCTTTGTTCCTTTCTGAAGGTTTTAAAGGAGAATTTGTTTCCTTGGAAGTTGATAGGGCTTaGTTCCTTTCTGAAGGTTTT +
Preference number: 5 (lower is better)
Translates to: VDRALFLSEGFKGEFVSLEVDRA*FLSEGF
Trigger: AAAACCTTCAGAAAGGAACAAAGCCCTATCAACTTC...CAAGGAAACAAATTCTCCTTTAAAACCTTCAGAAAGGAACAAAGCCCTATCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469450.1
CDS-3UTR CAA 90 bp GTTGATAGGGCTTTGTTCCTTTCTGAAGGTTTTAAAGGAGAATTTGTTTCCTTGGCTAAAACCAAGAAGTaGATAGGGCTTTGTTCCTTT +
Preference number: 5 (lower is better)
Translates to: VDRALFLSEGFKGEFVSLAKTKK*IGLCSF
Trigger: AAAGGAACAAAGCCCTATCAACTTCTTGGTTTTAGC...CAAGGAAACAAATTCTCCTTTAAAACCTTCAGAAAGGAACAAAGCCCTATCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469450.1
CDS-3UTR CAA 90 bp AGGGATTGGTCCAAACAAATGGAGTTTATGAAGCAATGGATACTTGTAAAAGGTTGTCAGATTTTAATATaGCATCTGAGTGGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: RDWSKQMEFMKQWILVKGCQILI*HLSGLP
Trigger: AGGAAGACCACTCAGATGCAATATTAAAATCTGACA...ACCTTTTACAAGTATCCATTGCTTCATAAACTCCATTTGTTTGGACCAATCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp ACATCTTTATTCTTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACATATATTATGCTGATTGGTTaGACTTGGATCCAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: TSLFFGAPLKVCIILSTYIMLIG*TWIQAK
Trigger: CTTTGCTTGGATCCAAGTCAAACCAATCAGCATAAT...ATATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAAAGATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CAA 90 bp TTTTTCTCACTGAATTGGGAATGTGATAAGCGCTGGTCAAACCATAAAATTCTGAAATTTGCCTTGCTTTaGTTTAAGGGATTGGTCCAA +
Preference number: 5 (lower is better)
Translates to: FFSLNWECDKRWSNHKILKFALL*FKGLVQ
Trigger: TTGGACCAATCCCTTAAACAAAAGCAAGGCAAATTT...CAGAATTTTATGGTTTGACCAGCGCTTATCACATTCCCAATTCAGTGAGAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000491297.6
CDS-3UTR CAA 90 bp TTGAACATCTTTATTCTTTGGTGCTCCATTGAAAGTCTGCATCATCCTTTCAACAAATTTGCCTTGCTTTaGTTTAAGGGATTGGTCCAA +
Preference number: 5 (lower is better)
Translates to: LNIFILWCSIESLHHPFNKFALL*FKGLVQ
Trigger: TTGGACCAATCCCTTAAACAAAAGCAAGGCAAATTT...GTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAAAGATGTTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491297.6
CDS-3UTR CAA 90 bp GATAGGGCTTTGTTCCTTTCTGAAGGTTTTAAAGGAGAATTTGTTTCCTTGATTCATTTGCTTTACTACTaGACTCAACCACAGATTGTT +
Preference number: 5 (lower is better)
Translates to: DRALFLSEGFKGEFVSLIHLLYY*TQPQIV
Trigger: AACAATCTGTGGTTGAGTCAAGTAGTAAAGCAAATG...AATCAAGGAAACAAATTCTCCTTTAAAACCTTCAGAAAGGAACAAAGCCCTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469450.1
CDS CAA 72 bp CCTCCGTTAGCGGCTCGGGCCGAGGCTCCGGAATGTTaGCCGGGCGTCATGGCGACGGTGGAGCCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: PPLAARAEAPEC*PGVMATVEPWL
Trigger: GAGCCAGGGCTCCACCGTCGCCATGACGCCCGGCAAACATTCCGGAGCCTCGGCCCGAGCCGCTAACGGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371026.8
CDS CCA 72 bp TCTGCTGCTTGTGACTGCCTGCCGGAGAGACTGGCATaGTGGCGACCAGCTGGGGAGTGGTGCACCACCCCT +
Preference number: 6 (lower is better)
Translates to: SAACDCLPERLA*WRPAGEWCTTP
Trigger: AGGGGTGGTGCACCACTCCCCAGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371022.3
ENST00000371023.7
ENST00000371026.8
ENST00000531980.5
ENST00000532629.1
CDS GCA 72 bp TGCCTCCAACCCGAAGTTCTGCTGCTTGTGACTGCCTaGCGGAGAGACTGGCATGGTGGCGACCAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: CLQPEVLLLVTA*RRDWHGGDQLG
Trigger: CCCCAGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTTCGGGTTGGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS CCA 72 bp GCTGCTTGTGACTGCCTGCCGGAGAGACTGGCATGGTaGCGACCAGCTGGGGAGTGGTGCACCACCCCTTTT +
Preference number: 6 (lower is better)
Translates to: AACDCLPERLAW*RPAGEWCTTPF
Trigger: AAAAGGGGTGGTGCACCACTCCCCAGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371022.3
ENST00000371023.7
ENST00000371026.8
ENST00000531980.5
ENST00000532629.1
CDS CCA 72 bp GAAGTTCTGCTGCTTGTGACTGCCTGCCGGAGAGACTaGCATGGTGGCGACCAGCTGGGGAGTGGTGCACCA +
Preference number: 6 (lower is better)
Translates to: EVLLLVTACRRD*HGGDQLGSGAP
Trigger: TGGTGCACCACTCCCCAGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371022.3
ENST00000371023.7
ENST00000371026.8
ENST00000531980.5
ENST00000532629.1
CDS GCA 72 bp CTCATGCCTCCAACCCGAAGTTCTGCTGCTTGTGACTaGCTGCCGGAGAGACTGGCATGGTGGCGACCAGCT +
Preference number: 6 (lower is better)
Translates to: LMPPTRSSAACD*LPERLAWWRPA
Trigger: AGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTTCGGGTTGGAGGCATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS TCA 72 bp ATGTCTCATGCCTCCAACCCGAAGTTCTGCTGCTTGTaGCTGCCTGCCGGAGAGACTGGCATGGTGGCGACC +
Preference number: 6 (lower is better)
Translates to: MSHASNPKFCCL*LPAGETGMVAT
Trigger: GGTCGCCACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTTCGGGTTGGAGGCATGAGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS GCA 72 bp ATTGTTCAACCCGAAGTTCTGCTGCTTGTGACTGCCTaGCGGAGAGACTGGCATGGTGGCGACCAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: IVQPEVLLLVTA*RRDWHGGDQLG
Trigger: CCCCAGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTTCGGGTTGAACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371022.3
ENST00000371023.7
ENST00000371026.8
CDS TCA 72 bp TGTGTGGCATTGTTCAACCCGAAGTTCTGCTGCTTGTaGCTGCCTGCCGGAGAGACTGGCATGGTGGCGACC +
Preference number: 6 (lower is better)
Translates to: CVALFNPKFCCL*LPAGETGMVAT
Trigger: GGTCGCCACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTTCGGGTTGAACAATGCCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371022.3
ENST00000371023.7
ENST00000371026.8
CDS GCA 72 bp TGGCATTGTTCAACCCGAAGTTCTGCTGCTTGTGACTaGCTGCCGGAGAGACTGGCATGGTGGCGACCAGCT +
Preference number: 6 (lower is better)
Translates to: WHCSTRSSAACD*LPERLAWWRPA
Trigger: AGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTTCGGGTTGAACAATGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371022.3
ENST00000371023.7
ENST00000371026.8
CDS GCA 72 bp AGTAAGTGGATAACCCGAAGTTCTGCTGCTTGTGACTaGCTGCCGGAGAGACTGGCATGGTGGCGACCAGCT +
Preference number: 6 (lower is better)
Translates to: SKWITRSSAACD*LPERLAWWRPA
Trigger: AGCTGGTCGCCACCATGCCAGTCTCTCCGGCAGGCAGTCACAAGCAGCAGAACTTCGGGTTATCCACTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531980.5
CDS CCA 72 bp CTCCATATGGACTCTGATAAATACGTTCTGGCCACATaGGATTCTTTATTGACCAGCAGCAAGCCAGTCCTC +
Preference number: 6 (lower is better)
Translates to: LHMDSDKYVLAT*DSLLTSSKPVL
Trigger: GAGGACTGGCTTGCTGCTGGTCAATAAAGAATCCCATGTGGCCAGAACGTATTTATCAGAGTCCATATGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000464352.6
CDS TCA 72 bp TTTGGTTGTGTGGCATTGTTCCTTTTATGTGAACTCTaGAACTTGTCACTGGTGTCTCAGGGACTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: FGCVALFLLCEL*NLSLVSQGLFS
Trigger: GGAGAAGAGTCCCTGAGACACCAGTGACAAGTTTCAGAGTTCACATAAAAGGAACAATGCCACACAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488333.2
CDS GCA 72 bp AACCTTTCCTTCATCTTCAAAGACAGCAACATTGATTaGATTCCCGCTGACCTTCTTCTGTCATCACGTCTC +
Preference number: 6 (lower is better)
Translates to: NLSFIFKDSNID*IPADLLLSSRL
Trigger: GAGACGTGATGACAGAAGAAGGTCAGCGGGAATGCAATCAATGTTGCTGTCTTTGAAGATGAAGGAAAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469450.1
CDS TCA 72 bp CTGGATGGAACCAATGTACTTCTTACATATATTGATTaGTGTCTCATGCCTCCAACCCGAAGTTCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: LDGTNVLLTYID*CLMPPTRSSAA
Trigger: AGCAGCAGAACTTCGGGTTGGAGGCATGAGACATCAATCAATATATGTAAGAAGTACATTGGTTCCATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532629.1
CDS TCA 72 bp ATCCACTGTAGTTGCCATACAGGTCCCAAATGTTTTTaGGGTGATTCACTACTATCCAGAACTGGAACATTA +
Preference number: 6 (lower is better)
Translates to: IHCSCHTGPKCF*GDSLLSRTGTL
Trigger: TAATGTTCCAGTTCTGGATAGTAGTGAATCACCTCAAAAACATTTGGGACCTGTATGGCAACTACAGTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000464352.6
CDS CAA 72 bp GAACTGGAACATTACTGTTGCTCCGTACATTGTAAATaGCAATTGTGCCATTGTGATAGCCAACGGCTAAAA +
Preference number: 6 (lower is better)
Translates to: ELEHYCCSVHCK*QLCHCDSQRLK
Trigger: TTTTAGCCGTTGGCTATCACAATGGCACAATTGCAATTTACAATGTACGGAGCAACAGTAATGTTCCAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000464352.6
CDS GCA 72 bp GTGATTCACTACTATCCAGAACTGGAACATTACTGTTaGTCCGTACATTGTAAATTGCAATTGTGCCATTGT +
Preference number: 6 (lower is better)
Translates to: VIHYYPELEHYC*SVHCKLQLCHC
Trigger: ACAATGGCACAATTGCAATTTACAATGTACGGAGCAACAGTAATGTTCCAGTTCTGGATAGTAGTGAATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371026.8
ENST00000464352.6
CDS CCA 72 bp GTCAACAGCCAGATAAAAATGCTTCTTATTCTTGTTTaGGTTACCATGGGATTCTTTATTGACCAGCAGCAA +
Preference number: 6 (lower is better)
Translates to: VNSQIKMLLILV*VTMGFFIDQQQ
Trigger: TTGCTGCTGGTCAATAAAGAATCCCATGGTAACCCAAACAAGAATAAGAAGCATTTTTATCTGGCTGTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371023.7
ENST00000531552.1
CDS TCA 72 bp TCCCAGTGTAATTTCCAGTCTAAGATTGGATTGTTCTaGGCAGTTTTTGATAGCTTCTACAAGCAAACTTTT +
Preference number: 6 (lower is better)
Translates to: SQCNFQSKIGLF*AVFDSFYKQTF
Trigger: AAAAGTTTGCTTGTAGAAGCTATCAAAAACTGCTCAGAACAATCCAATCTTAGACTGGAAATTACACTGGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493572.1