RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAI2 (Homo sapiens)

Ensembl gene IDs: ENSG00000171595

Ensembl transcript IDs: ENST00000311014.11, ENST00000446837.2, ENST00000579055.5, ENST00000579312.1, ENST00000579490.5, ENST00000582036.5

Found 701 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGACCTCCAGCAGGGTGGTTGTCCCCAGCTGGGAGCCGCAGGCGATaGGACACCCATTGTCCTGCACCCGGAGGCAGAAGAGGGCCTCGT +
Preference number: 1 (lower is better)
Translates to: RPPAGWLSPAGSRRR*DTHCPAPGGRRGPR
Trigger: ACGAGGCCCTCTTCTGCCTCCGGGTGCAGGACAATGGGTGTCTCATCGCCTGCGGCTCCCAGCTGGGGACAACCACCCTGCTGGAGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR GCA 90 bp GTTGTCCCCAGCTGGGAGCCGCAGGCGATGAGACACCCATTGTCCTaGACCCGGAGGCAGAAGAGGGCCTCGTCACACACCTTCAAGCTG +
Preference number: 1 (lower is better)
Translates to: VVPSWEPQAMRHPLS*TRRQKRASSHTFKL
Trigger: CAGCTTGAAGGTGTGTGACGAGGCCCTCTTCTGCCTCCGGGTGCAGGACAATGGGTGTCTCATCGCCTGCGGCTCCCAGCTGGGGACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CCA 90 bp GCCAGATGGTGCCATACACAGGGTCTCGGTGGCTGGACTCAATGGTaGATAGCTCCGCCACCAGGCTGCCCTTTCGGGTGTCCCAGCAGG +
Preference number: 1 (lower is better)
Translates to: ARWCHTQGLGGWTQW*IAPPPGCPFGCPSR
Trigger: CCTGCTGGGACACCCGAAAGGGCAGCCTGGTGGCGGAGCTATCCACCATTGAGTCCAGCCACCGAGACCCTGTGTATGGCACCATCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CCA 90 bp GCAGCCAGATGGTGCCATACACAGGGTCTCGGTGGCTGGACTCAATaGTGGATAGCTCCGCCACCAGGCTGCCCTTTCGGGTGTCCCAGC +
Preference number: 1 (lower is better)
Translates to: AARWCHTQGLGGWTQ*WIAPPPGCPFGCPS
Trigger: GCTGGGACACCCGAAAGGGCAGCCTGGTGGCGGAGCTATCCACCATTGAGTCCAGCCACCGAGACCCTGTGTATGGCACCATCTGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR GCA 90 bp GGTCTCGGTGGCTGGACTCAATGGTGGATAGCTCCGCCACCAGGCTaGCCTTTCGGGTGTCCCAGCAGGCTATCTGTCCATTGTAGCAGC +
Preference number: 1 (lower is better)
Translates to: GLGGWTQWWIAPPPG*PFGCPSRLSVHCSS
Trigger: GCTGCTACAATGGACAGATAGCCTGCTGGGACACCCGAAAGGGCAGCCTGGTGGCGGAGCTATCCACCATTGAGTCCAGCCACCGAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR GCA 90 bp TGCCCATCCGTGGAAGCTGAGAAGCACTCGGTGCCCGTCTTCGACTaGAGCCAGATGGTGCCATACACAGGGTCTCGGTGGCTGGACTCA +
Preference number: 1 (lower is better)
Translates to: CPSVEAEKHSVPVFD*SQMVPYTGSRWLDS
Trigger: TGAGTCCAGCCACCGAGACCCTGTGTATGGCACCATCTGGCTGCAGTCGAAGACGGGCACCGAGTGCTTCTCAGCTTCCACGGATGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR GCA 90 bp CTTCTGGACTTGGTTGCTGCCTTCTCCTTCAGCCGCATCTCCCGGTaGCTGGCCTCCAGGATCTTCTCTCGCCGGGTCTCACGCTCAAAC +
Preference number: 1 (lower is better)
Translates to: LLDLVAAFSFSRISR*LASRIFSRRVSRSN
Trigger: GTTTGAGCGTGAGACCCGGCGAGAGAAGATCCTGGAGGCCAGGCACCGGGAGATGCGGCTGAAGGAGAAGGCAGCAACCAAGTCCAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CCA 90 bp CAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTaGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTG +
Preference number: 1 (lower is better)
Translates to: QQNSQARPARPLPHT*RLLSWQCVQMVREL
Trigger: CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR CCA 90 bp TCTTCGACTGCAGCCAGATGGTGCCATACACAGGGTCTCGGTGGCTaGACTCAATGGTGGATAGCTCCGCCACCAGGCTGCCCTTTCGGG +
Preference number: 1 (lower is better)
Translates to: SSTAARWCHTQGLGG*TQWWIAPPPGCPFG
Trigger: CCCGAAAGGGCAGCCTGGTGGCGGAGCTATCCACCATTGAGTCCAGCCACCGAGACCCTGTGTATGGCACCATCTGGCTGCAGTCGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CCA 90 bp CCCGTCTTCGACTGCAGCCAGATGGTGCCATACACAGGGTCTCGGTaGCTGGACTCAATGGTGGATAGCTCCGCCACCAGGCTGCCCTTT +
Preference number: 1 (lower is better)
Translates to: PVFDCSQMVPYTGSR*LDSMVDSSATRLPF
Trigger: AAAGGGCAGCCTGGTGGCGGAGCTATCCACCATTGAGTCCAGCCACCGAGACCCTGTGTATGGCACCATCTGGCTGCAGTCGAAGACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CCA 90 bp TGGACTTGGTTGCTGCCTTCTCCTTCAGCCGCATCTCCCGGTGCCTaGCCTCCAGGATCTTCTCTCGCCGGGTCTCACGCTCAAACATGG +
Preference number: 1 (lower is better)
Translates to: WTWLLPSPSAASPGA*PPGSSLAGSHAQTW
Trigger: CCATGTTTGAGCGTGAGACCCGGCGAGAGAAGATCCTGGAGGCCAGGCACCGGGAGATGCGGCTGAAGGAGAAGGCAGCAACCAAGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR TCA 90 bp TGGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTaGAGGTCTTCCCGAGGCCCTGCCATGGCCATGCAAGTCTGGTTG +
Preference number: 1 (lower is better)
Translates to: WTRRVDHGGETLPHS*RSSRGPAMAMQVWL
Trigger: CAACCAGACTTGCATGGCCATGGCAGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR TCA 90 bp GATGGGGCCATGATGGCCCGGGAAGGTGCACACAATCTTTTCAGCTaGCGTCTTGGCCTTGCGGTTGCAGGAGATGACGATGCCCTGCTC +
Preference number: 1 (lower is better)
Translates to: DGAMMAREGAHNLFS*RLGLAVAGDDDALL
Trigger: GAGCAGGGCATCGTCATCTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAAAGATTGTGTGCACCTTCCCGGGCCATCATGGCCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR GCA 90 bp TGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGCCCTaGCATGGCCATGCAAGTCTGGTTGAGGGTCAAGAGGTGGGAAAG +
Preference number: 1 (lower is better)
Translates to: WRRNPSPLLKVFPRP*HGHASLVEGQEVGK
Trigger: CTTTCCCACCTCTTGACCCTCAACCAGACTTGCATGGCCATGGCAGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR GCA 90 bp GGTTTCTCTGGAGGGCGTAGATGGGGCCATGATGGCCCGGGAAGGTaGACACAATCTTTTCAGCTGACGTCTTGGCCTTGCGGTTGCAGG +
Preference number: 1 (lower is better)
Translates to: GFSGGRRWGHDGPGR*TQSFQLTSWPCGCR
Trigger: CCTGCAACCGCAAGGCCAAGACGTCAGCTGAAAAGATTGTGTGCACCTTCCCGGGCCATCATGGCCCCATCTACGCCCTCCAGAGAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CCA 90 bp GCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTaGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTT +
Preference number: 1 (lower is better)
Translates to: ARPARPLPHTWRLLS*QCVQMVRELPGKVF
Trigger: AAATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR GCA 90 bp AAGCTGAGAAGCACTCGGTGCCCGTCTTCGACTGCAGCCAGATGGTaGCATACACAGGGTCTCGGTGGCTGGACTCAATGGTGGATAGCT +
Preference number: 1 (lower is better)
Translates to: KLRSTRCPSSTAARW*HTQGLGGWTQWWIA
Trigger: AGCTATCCACCATTGAGTCCAGCCACCGAGACCCTGTGTATGGCACCATCTGGCTGCAGTCGAAGACGGGCACCGAGTGCTTCTCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CCA 90 bp TGGAAGCTGAGAAGCACTCGGTGCCCGTCTTCGACTGCAGCCAGATaGTGCCATACACAGGGTCTCGGTGGCTGGACTCAATGGTGGATA +
Preference number: 1 (lower is better)
Translates to: WKLRSTRCPSSTAAR*CHTQGLGGWTQWWI
Trigger: TATCCACCATTGAGTCCAGCCACCGAGACCCTGTGTATGGCACCATCTGGCTGCAGTCGAAGACGGGCACCGAGTGCTTCTCAGCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR GCA 90 bp TCAGCTGACGTCTTGGCCTTGCGGTTGCAGGAGATGACGATGCCCTaGTCGGTCCCCACCATGAACTTGGTGGGCAAAGTAGATTCGAAC +
Preference number: 1 (lower is better)
Translates to: SADVLALRLQEMTMP*SVPTMNLVGKVDSN
Trigger: GTTCGAATCTACTTTGCCCACCAAGTTCATGGTGGGGACCGAGCAGGGCATCGTCATCTCCTGCAACCGCAAGGCCAAGACGTCAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR GCA 90 bp AAGAGGGCCTCGTCACACACCTTCAAGCTGAGGGTGGGATCGCACTaGTCGAACATGAAGTCCCAGATATCCAGGGTTCCGTCCATCCTG +
Preference number: 1 (lower is better)
Translates to: KRASSHTFKLRVGSH*SNMKSQISRVPSIL
Trigger: CAGGATGGACGGAACCCTGGATATCTGGGACTTCATGTTCGAGCAGTGCGATCCCACCCTCAGCTTGAAGGTGTGTGACGAGGCCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CCA 90 bp GTCTCACGCTCAAACATGGAAGAGGCTACGTTCTTCTCATTCCTCTaGAGGGTAGAGAGCCCAGGCGAGACCTCCAGCAGGGTGGTTGTC +
Preference number: 1 (lower is better)
Translates to: VSRSNMEEATFFSFL*RVESPGETSSRVVV
Trigger: GACAACCACCCTGCTGGAGGTCTCGCCTGGGCTCTCTACCCTCCAGAGGAATGAGAAGAACGTAGCCTCTTCCATGTTTGAGCGTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CCA 90 bp TCAGGAAGTTCTTCGGGTAGAAGGGGTTTCTCTGGAGGGCGTAGATaGGGCCATGATGGCCCGGGAAGGTGCACACAATCTTTTCAGCTG +
Preference number: 1 (lower is better)
Translates to: SGSSSGRRGFSGGRR*GHDGPGRCTQSFQL
Trigger: CAGCTGAAAAGATTGTGTGCACCTTCCCGGGCCATCATGGCCCCATCTACGCCCTCCAGAGAAACCCCTTCTACCCGAAGAACTTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR TCA 90 bp CCAGGGAGATGGCCCCCAAGGCATTTTCCAACTGTTCCTTCTTGGTaGTGTCCAAGATCACAACTTCAGTGGGCTCGCTCATCTTTCGGA +
Preference number: 1 (lower is better)
Translates to: PGRWPPRHFPTVPSW*CPRSQLQWARSSFG
Trigger: TCCGAAAGATGAGCGAGCCCACTGAAGTTGTGATCTTGGACATCACCAAGAAGGAACAGTTGGAAAATGCCTTGGGGGCCATCTCCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CCA 90 bp CCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATaGTCAGGGAGCTGCCTGGAAAGGTATTTTCAAAGTGGACAGACT +
Preference number: 1 (lower is better)
Translates to: PSHILGGSCRGNVSK*SGSCLERYFQSGQT
Trigger: AGTCTGTCCACTTTGAAAATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR CCA 90 bp AAGGTATTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTaGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCC +
Preference number: 1 (lower is better)
Translates to: KVFSKWTDFLFLICR*TRRVDHGGETLPHS
Trigger: GGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAATACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR CCA 90 bp TGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTTTCAAAGTaGACAGACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTC +
Preference number: 1 (lower is better)
Translates to: CVQMVRELPGKVFSK*TDFLFLICRWTRRV
Trigger: GACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR CCA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTaGAAAGGTATTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTG +
Preference number: 1 (lower is better)
Translates to: EAPVVAMCPNGQGAA*KGIFKVDRLSVPDL
Trigger: CAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR CAA 90 bp AGGGTGGTTGTCCCCAGCTGGGAGCCGCAGGCGATGAGACACCCATaGTCCTGCACCCGGAGGCAGAAGAGGGCCTCGTCACACACCTTC +
Preference number: 2 (lower is better)
Translates to: RVVVPSWEPQAMRHP*SCTRRQKRASSHTF
Trigger: GAAGGTGTGTGACGAGGCCCTCTTCTGCCTCCGGGTGCAGGACAATGGGTGTCTCATCGCCTGCGGCTCCCAGCTGGGGACAACCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR TCA 90 bp TCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAACCCTTCCCCACTCCTaGAGGTCTTCCCGAGGCCCT +
Preference number: 2 (lower is better)
Translates to: SRPSPPTYLEAPVVAMCPTLPHS*RSSRGP
Trigger: AGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGT...TGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR GCA 90 bp GTGGTTGTCCCCAGCTGGGAGCCGCAGGCGATGAGACACCCATTGTCCTGCACCCTGAGAAGCACTCGGTaGCCGTCTTCGACTGCAGCC +
Preference number: 2 (lower is better)
Translates to: VVVPSWEPQAMRHPLSCTLRSTR*PSSTAA
Trigger: GGCTGCAGTCGAAGACGGGCACCGAGTGCTTCTCAG...GGTGCAGGACAATGGGTGTCTCATCGCCTGCGGCTCCCAGCTGGGGACAACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR TCA 90 bp CACATGACCTGCCCATCCGTGGAAGCTGAGAAGCACTCGGTGCCCGTCTTCGACACCCTTCCCCACTCCTaGAGGTCTTCCCGAGGCCCT +
Preference number: 2 (lower is better)
Translates to: HMTCPSVEAEKHSVPVFDTLPHS*RSSRGP
Trigger: AGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGT...GTCGAAGACGGGCACCGAGTGCTTCTCAGCTTCCACGGATGGGCAGGTCATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CAA 90 bp GCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTaGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCT +
Preference number: 2 (lower is better)
Translates to: AAEQPSSSRPSPPTY*EAPVVAMCPNGQGA
Trigger: AGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR TCA 90 bp GGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGACCCTTCCCCACTCCTaGAGGTCTTCCCGAGGCCCT +
Preference number: 2 (lower is better)
Translates to: GGSCRGNVSKWSGSCLERTLPHS*RSSRGP
Trigger: AGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGT...CCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR TCA 90 bp GAGCCGCAGGCGATGAGACACCCATTGTCCTGCACCCGGAGGCAGAAGAGGGCCGGGAATCTTTGGGGTTaGACTCCAACGTCACGAGTG +
Preference number: 2 (lower is better)
Translates to: EPQAMRHPLSCTRRQKRAGNLWG*TPTSRV
Trigger: CACTCGTGACGTTGGAGTTCAACCCCAAAGATTCCC...GGCCCTCTTCTGCCTCCGGGTGCAGGACAATGGGTGTCTCATCGCCTGCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CAA 90 bp TGGCCCGGGAAGGTGCACACAATCTTTTCAGCTGACGTCTTGGCCTaGCGGTTGCAGGAGATGACGATGCCCTGCTCGGTCCCCACCATG +
Preference number: 2 (lower is better)
Translates to: WPGKVHTIFSADVLA*RLQEMTMPCSVPTM
Trigger: CATGGTGGGGACCGAGCAGGGCATCGTCATCTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAAAGATTGTGTGCACCTTCCCGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR TCA 90 bp CCGCATCTCCCGGTGCCTGGCCTCCAGGATCTTCTCTCGCCGGGTCTCACGCTCCAGACTTTCTGTTCCTaGTTTGTAGGTGGACGAGGA +
Preference number: 2 (lower is better)
Translates to: PHLPVPGLQDLLSPGLTLQTFCS*FVGGRG
Trigger: TCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTG...GAGCGTGAGACCCGGCGAGAGAAGATCCTGGAGGCCAGGCACCGGGAGATGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR TCA 90 bp GGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTGGGAGCCGCAGGCGATaGGACACCCATTGTCCTGCA +
Preference number: 2 (lower is better)
Translates to: GRGGSIMEEKPFPTPEGLGSRRR*DTHCPA
Trigger: TGCAGGACAATGGGTGTCTCATCGCCTGCGGCTCCC...AAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR GCA 90 bp TTCCCGGCTGTCTTCAGACCAAATGCGGGCTGTCCAGTCGCCAACCGTCAGGAAGTCTTCCCGAGGCCCTaGCATGGCCATGCAAGTCTG +
Preference number: 2 (lower is better)
Translates to: FPAVFRPNAGCPVANRQEVFPRP*HGHASL
Trigger: CAGACTTGCATGGCCATGGCAGGGCCTCGGGAAGAC...TTCCTGACGGTTGGCGACTGGACAGCCCGCATTTGGTCTGAAGACAGCCGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR GCA 90 bp GGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTAGCCGCATCTCCCGGTaGCTGGCCTCCAGGATCTTC +
Preference number: 2 (lower is better)
Translates to: GRGGSIMEEKPFPTPEGLSRISR*LASRIF
Trigger: GAAGATCCTGGAGGCCAGGCACCGGGAGATGCGGCT...AAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR CCA 90 bp CAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGGGCAATGTGTCCAAATaGTCAGGGAGCTGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: QVQQNSQARPARPLPHTWGNVSK*SGSCLE
Trigger: TTCCAGGCAGCTCCCTGACCATTTGGACACATTGCC...CCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR CCA 90 bp AGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCTCCAACGTCACGAGTaGAGACGATGGCTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: RTAKLVPPVPSHILGGSCLQRHE*RRWLQS
Trigger: GCTCTGAAGCCATCGTCTCCACTCGTGACGTTGGAG...ACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR CCA 90 bp TCCTGCACCCGGAGGCAGAAGAGGGCCTCGTCACACACCTTCAAGCTGAGGGTGTCGACTGCAGCCAGATaGTGCCATACACAGGGTCTC +
Preference number: 2 (lower is better)
Translates to: SCTRRQKRASSHTFKLRVSTAAR*CHTQGL
Trigger: GAGACCCTGTGTATGGCACCATCTGGCTGCAGTCGA...CACCCTCAGCTTGAAGGTGTGTGACGAGGCCCTCTTCTGCCTCCGGGTGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR TCA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACCCATGCAAGTCTGGTTaGGGGTCAAGAGGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHPCKSG*GSRGGK
Trigger: TTTCCCACCTCTTGACCCTCAACCAGACTTGCATGG...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR GCA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTGTCTTCCCGAGGCCCTaGCATGGCCATGCAAGTCTG +
Preference number: 2 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGVFPRP*HGHASL
Trigger: CAGACTTGCATGGCCATGGCAGGGCCTCGGGAAGAC...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR CCA 90 bp CCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGCCATGCAAGTCTaGTTGAGGGTCAAGAGGTGG +
Preference number: 2 (lower is better)
Translates to: PARPLPHTWRLLSWQCVQMAMQV*LRVKRW
Trigger: CCACCTCTTGACCCTCAACCAGACTTGCATGGCCAT...TTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR CCA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATGGCCATGCAAGTCTaGTTGAGGGTCAAGAGGTGG +
Preference number: 2 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHMAMQV*LRVKRW
Trigger: CCACCTCTTGACCCTCAACCAGACTTGCATGGCCAT...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR TCA 90 bp CAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGCAGACTTTCTGTTCCTaGTTTGTAGGTGGACGAGGA +
Preference number: 2 (lower is better)
Translates to: QVQQNSQARPARPLPHTWQTFCS*FVGGRG
Trigger: TCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTG...CCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR TCA 90 bp ATCGCACTGCTCGAACATGAAGTCCCAGATATCCAGGGTTCCGTCCATCCTGGTTGCGGTTGCAGGAGATaGCGATGCCCTGCTCGGTCC +
Preference number: 2 (lower is better)
Translates to: IALLEHEVPDIQGSVHPGCGCRR*RCPARS
Trigger: GGACCGAGCAGGGCATCGTCATCTCCTGCAACCGCA...ACCAGGATGGACGGAACCCTGGATATCTGGGACTTCATGTTCGAGCAGTGCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CAA 90 bp GGGAAGGTGCACACAATCTTTTCAGCTGACGTCTTGGCCTTGCGGTaGCAGGAGATGACGATGCCCTGCTCGGTCCCCACCATGAACTTG +
Preference number: 2 (lower is better)
Translates to: GKVHTIFSADVLALR*QEMTMPCSVPTMNL
Trigger: CAAGTTCATGGTGGGGACCGAGCAGGGCATCGTCATCTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAAAGATTGTGTGCACCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR TCA 90 bp CCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGCCATGCAAGTCTGGTTaGGGGTCAAGAGGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: PVPSHILGGSCRGNVSKWPCKSG*GSRGGK
Trigger: TTTCCCACCTCTTGACCCTCAACCAGACTTGCATGG...CCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR TCA 90 bp GAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGCCATGCAAGTCTGGTTaGGGGTCAAGAGGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: EEGRSWRRNPSPLLKVFPPCKSG*GSRGGK
Trigger: TTTCCCACCTCTTGACCCTCAACCAGACTTGCATGG...CGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR TCA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACAGACTTTCTGTTCCTaGTTTGTAGGTGGACGAGGA +
Preference number: 2 (lower is better)
Translates to: ESIQVQQNSQARPARPLPQTFCS*FVGGRG
Trigger: TCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTG...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR TCA 90 bp TTCGAACTCCAGGGAGATGGCCCCCAAGGCATTTTCCAACTGTTCCTTCTTGGTCCCATCCGTGGAAGCTaGGAAGCACTCGGTGCCCGT +
Preference number: 2 (lower is better)
Translates to: FELQGDGPQGIFQLFLLGPIRGS*EALGAR
Trigger: ACGGGCACCGAGTGCTTCTCAGCTTCCACGGATGGG...ACCAAGAAGGAACAGTTGGAAAATGCCTTGGGGGCCATCTCCCTGGAGTTCGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR GCA 90 bp GCCCCCAAGGCATTTTCCAACTGTTCCTTCTTGGTGATGTCCAAGATCACAACTGCTCCGCCACCAGGCTaGCCTTTCGGGTGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: APKAFSNCSFLVMSKITTAPPPG*PFGCPS
Trigger: GCTGGGACACCCGAAAGGGCAGCCTGGTGGCGGAGC...AGTTGTGATCTTGGACATCACCAAGAAGGAACAGTTGGAAAATGCCTTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR CCA 90 bp CGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATATGGCCATGCAAGTCTaGTTGAGGGTCAAGAGGTGG +
Preference number: 2 (lower is better)
Translates to: RPSPPTYLEAPVVAMCPNMAMQV*LRVKRW
Trigger: CCACCTCTTGACCCTCAACCAGACTTGCATGGCCAT...ATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR CCA 90 bp GATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCGAGGAGGGTCGATCATaGAGGAGAAACCCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: DNRKHSGAAEQPSSSRPSEEGRS*RRNPSP
Trigger: TGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTC...GGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR CCA 90 bp GGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGGCAATGTGTCCAAATaGTCAGGGAGCTGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: GGSIMEEKPFPTPEGLPEGNVSK*SGSCLE
Trigger: TTCCAGGCAGCTCCCTGACCATTTGGACACATTGCC...CTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR CCA 90 bp AGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTAGGTGGCTGGACTCAATaGTGGATAGCTCCGCCACCA +
Preference number: 2 (lower is better)
Translates to: RLLSWQCVQMVRELPGKVGGWTQ*WIAPPP
Trigger: TGGTGGCGGAGCTATCCACCATTGAGTCCAGCCACC...TACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR TCA 90 bp CGGGTCTCACGCTCAAACATGGAAGAGGCTACGTTCTTCTCATTCCTCTGGAGGCACACACCTTCAAGCTaGGGGTGGGATCGCACTGCT +
Preference number: 2 (lower is better)
Translates to: RVSRSNMEEATFFSFLWRHTPSS*GWDRTA
Trigger: AGCAGTGCGATCCCACCCTCAGCTTGAAGGTGTGTG...CCTCCAGAGGAATGAGAAGAACGTAGCCTCTTCCATGTTTGAGCGTGAGACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR CCA 90 bp GATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCGGCAATGTGTCCAAATaGTCAGGGAGCTGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: DNRKHSGAAEQPSSSRPSGNVSK*SGSCLE
Trigger: TTCCAGGCAGCTCCCTGACCATTTGGACACATTGCC...GGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR CCA 90 bp AACCGTCAGGAAGTTCTTCGGGTAGAAGGGGTTTCTCTGGAGGGCGTAGATGGGCAGGGTCTCGGTGGCTaGACTCAATGGTGGATAGCT +
Preference number: 2 (lower is better)
Translates to: NRQEVLRVEGVSLEGVDGQGLGG*TQWWIA
Trigger: AGCTATCCACCATTGAGTCCAGCCACCGAGACCCTG...CCCATCTACGCCCTCCAGAGAAACCCCTTCTACCCGAAGAACTTCCTGACGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR TCA 90 bp AACCGTCAGGAAGTTCTTCGGGTAGAAGGGGTTTCTCTGGAGGGCGTAGATGGGCCATGCAAGTCTGGTTaGGGGTCAAGAGGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: NRQEVLRVEGVSLEGVDGPCKSG*GSRGGK
Trigger: TTTCCCACCTCTTGACCCTCAACCAGACTTGCATGG...CCCATCTACGCCCTCCAGAGAAACCCCTTCTACCCGAAGAACTTCCTGACGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR GCA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAAGTCTTCCCGAGGCCCTaGCATGGCCATGCAAGTCTG +
Preference number: 2 (lower is better)
Translates to: DFLFLICRWTRRVDHGGEVFPRP*HGHASL
Trigger: CAGACTTGCATGGCCATGGCAGGGCCTCGGGAAGAC...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR CCA 90 bp ATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCATGGCCATGCAAGTCTaGTTGAGGGTCAAGAGGTGG +
Preference number: 2 (lower is better)
Translates to: ICRWTRRVDHGGETLPHSMAMQV*LRVKRW
Trigger: CCACCTCTTGACCCTCAACCAGACTTGCATGGCCAT...GGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR CCA 90 bp CGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGGTCAGGGAGCTGCCTaGAAAGGTATTTTCAAAGTG +
Preference number: 2 (lower is better)
Translates to: RGGSIMEEKPFPTPEGLPGQGAA*KGIFKV
Trigger: CACTTTGAAAATACCTTTCCAGGCAGCTCCCTGACC...GGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR CCA 90 bp CCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCACCCAGGAGTACGTaGGAATCTTTGGGGTTGAAC +
Preference number: 2 (lower is better)
Translates to: PHTWRLLSWQCVQMVRELPPRST*ESLGLN
Trigger: GTTCAACCCCAAAGATTCCCACGTACTCCTGGGTGG...CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR TCA 90 bp GCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTCCATGCAAGTCTGGTTaGGGGTCAAGAGGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: APVVAMCPNGQGAAWKGIPCKSG*GSRGGK
Trigger: TTTCCCACCTCTTGACCCTCAACCAGACTTGCATGG...AATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR TCA 90 bp CCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGCAGACTTTCTGTTCCTaGTTTGTAGGTGGACGAGGA +
Preference number: 2 (lower is better)
Translates to: PLPHTWRLLSWQCVQMVRQTFCS*FVGGRG
Trigger: TCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTG...CCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR GCA 90 bp GCTCCAGGCAGCATCAGTGAGGTAAGCCATGTGGTACTTGGTCCACATGATGGATGTCTTCAGACCAAATaGGGGCTGTCCAGTCGCCAA +
Preference number: 2 (lower is better)
Translates to: APGSISEVSHVVLGPHDGCLQTK*GLSSRQ
Trigger: TTGGCGACTGGACAGCCCGCATTTGGTCTGAAGACA...TCCATCATGTGGACCAAGTACCACATGGCTTACCTCACTGATGCTGCCTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR CCA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAACCCCTCCCACATACTTaGAGGCTCCTGTCGTGGCAA +
Preference number: 2 (lower is better)
Translates to: DFLFLICRWTRRVDHGGEPLPHT*RLLSWQ
Trigger: TTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGG...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR TCA 90 bp ATCGCACTGCTCGAACATGAAGTCCCAGATATCCAGGGTTCCGTCCATCCTGGTCACAATCTTTTCAGCTaGCGTCTTGGCCTTGCGGTT +
Preference number: 2 (lower is better)
Translates to: IALLEHEVPDIQGSVHPGHNLFS*RLGLAV
Trigger: AACCGCAAGGCCAAGACGTCAGCTGAAAAGATTGTG...ACCAGGATGGACGGAACCCTGGATATCTGGGACTTCATGTTCGAGCAGTGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR GCA 90 bp TTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGTCTTCCCGAGGCCCTaGCATGGCCATGCAAGTCTG +
Preference number: 2 (lower is better)
Translates to: FSKWTDFLFLICRWTRRVVFPRP*HGHASL
Trigger: CAGACTTGCATGGCCATGGCAGGGCCTCGGGAAGAC...GACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR CCA 90 bp AACCGTCAGGAAGTTCTTCGGGTAGAAGGGGTTTCTCTGGAGGGCGTAGATGGGGGTCAGGGAGCTGCCTaGAAAGGTATTTTCAAAGTG +
Preference number: 2 (lower is better)
Translates to: NRQEVLRVEGVSLEGVDGGQGAA*KGIFKV
Trigger: CACTTTGAAAATACCTTTCCAGGCAGCTCCCTGACC...CCCATCTACGCCCTCCAGAGAAACCCCTTCTACCCGAAGAACTTCCTGACGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR CCA 90 bp ATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCTGGAGGCTCCTGTCGTaGCAATGTGTCCAAATGGTC +
Preference number: 2 (lower is better)
Translates to: IRITESIQVQQNSQARPAWRLLS*QCVQMV
Trigger: GACCATTTGGACACATTGCCACGACAGGAGCCTCCA...GGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR CAA 90 bp AACTCCAGGGAGATGGCCCCCAAGGCATTTTCCAACTGTTCCTTCTaGGTGATGTCCAAGATCACAACTTCAGTGGGCTCGCTCATCTTT +
Preference number: 2 (lower is better)
Translates to: NSREMAPKAFSNCSF*VMSKITTSVGSLIF
Trigger: AAAGATGAGCGAGCCCACTGAAGTTGTGATCTTGGACATCACCAAGAAGGAACAGTTGGAAAATGCCTTGGGGGCCATCTCCCTGGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR CCA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCCTCCCACATACTTaGAGGCTCCTGTCGTGGCAA +
Preference number: 2 (lower is better)
Translates to: TRIRITESIQVQQNSQARPLPHT*RLLSWQ
Trigger: TTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGG...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR GCA 90 bp CCAGGCAGCATCAGTGAGGTAAGCCATGTGGTACTTGGTCCACATGATGGACGAAAATGGTCAGGGAGCTaGCTGGAAAGGTATTTTCAA +
Preference number: 2 (lower is better)
Translates to: PGSISEVSHVVLGPHDGRKWSGS*LERYFQ
Trigger: TTGAAAATACCTTTCCAGGCAGCTCCCTGACCATTT...TCGTCCATCATGTGGACCAAGTACCACATGGCTTACCTCACTGATGCTGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR CCA 90 bp TTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTTACACAGGGTCTCGGTaGCTGGACTCAATGGTGGAT +
Preference number: 2 (lower is better)
Translates to: FTRIRITESIQVQQNSQAYTGSR*LDSMVD
Trigger: ATCCACCATTGAGTCCAGCCACCGAGACCCTGTGTA...AGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR CCA 90 bp AATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAATGGAGGCTCCTGTCGTaGCAATGTGTCCAAATGGTC +
Preference number: 2 (lower is better)
Translates to: NFTRIRITESIQVQQNSQWRLLS*QCVQMV
Trigger: GACCATTTGGACACATTGCCACGACAGGAGCCTCCA...TTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR TCA 72 bp GCAGGGTGGTTGTCCCCAGCTGGGAGCCGCAGGCGATaGGACACCCATTGTCCTGCACCCGGAGGCAGAAGA +
Preference number: 3 (lower is better)
Translates to: AGWLSPAGSRRR*DTHCPAPGGRR
Trigger: TCTTCTGCCTCCGGGTGCAGGACAATGGGTGTCTCATCGCCTGCGGCTCCCAGCTGGGGACAACCACCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR GCA 72 bp AGCTGGGAGCCGCAGGCGATGAGACACCCATTGTCCTaGACCCGGAGGCAGAAGAGGGCCTCGTCACACACC +
Preference number: 3 (lower is better)
Translates to: SWEPQAMRHPLS*TRRQKRASSHT
Trigger: GGTGTGTGACGAGGCCCTCTTCTGCCTCCGGGTGCAGGACAATGGGTGTCTCATCGCCTGCGGCTCCCAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CCA 72 bp TTGCTGCCTTCTCCTTCAGCCGCATCTCCCGGTGCCTaGCCTCCAGGATCTTCTCTCGCCGGGTCTCACGCT +
Preference number: 3 (lower is better)
Translates to: LLPSPSAASPGA*PPGSSLAGSHA
Trigger: AGCGTGAGACCCGGCGAGAGAAGATCCTGGAGGCCAGGCACCGGGAGATGCGGCTGAAGGAGAAGGCAGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR CAA 90 bp AGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTTCCCCTCCCACATACTaGGAGGCTCCTGTCGTGGCA +
Preference number: 3 (lower is better)
Translates to: RTAKLVPPVPSHILGGSCSPPTY*EAPVVA
Trigger: TGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGA...ACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR CAA 90 bp AGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTGCTGACGTCTTGGCCTaGCGGTTGCAGGAGATGACG +
Preference number: 3 (lower is better)
Translates to: RTAKLVPPVPSHILGGSCADVLA*RLQEMT
Trigger: CGTCATCTCCTGCAACCGCAAGGCCAAGACGTCAGC...ACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CCA 72 bp TGGTGCCATACACAGGGTCTCGGTGGCTGGACTCAATaGTGGATAGCTCCGCCACCAGGCTGCCCTTTCGGG +
Preference number: 3 (lower is better)
Translates to: WCHTQGLGGWTQ*WIAPPPGCPFG
Trigger: CCCGAAAGGGCAGCCTGGTGGCGGAGCTATCCACCATTGAGTCCAGCCACCGAGACCCTGTGTATGGCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CCA 72 bp GCAGCCAGATGGTGCCATACACAGGGTCTCGGTGGCTaGACTCAATGGTGGATAGCTCCGCCACCAGGCTGC +
Preference number: 3 (lower is better)
Translates to: AARWCHTQGLGG*TQWWIAPPPGC
Trigger: GCAGCCTGGTGGCGGAGCTATCCACCATTGAGTCCAGCCACCGAGACCCTGTGTATGGCACCATCTGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR CAA 90 bp CAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGGCCATGCAAGTCTGGTaGAGGGTCAAGAGGTGGGAA +
Preference number: 3 (lower is better)
Translates to: QVQQNSQARPARPLPHTWAMQVW*RVKRWE
Trigger: TTCCCACCTCTTGACCCTCAACCAGACTTGCATGGC...CCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR CAA 90 bp GAGCCGCAGGCGATGAGACACCCATTGTCCTGCACCCGGAGGCAGAAGAGGGCCGTCCCCACCATGAACTaGGTGGGCAAAGTAGATTCG +
Preference number: 3 (lower is better)
Translates to: EPQAMRHPLSCTRRQKRAVPTMN*VGKVDS
Trigger: CGAATCTACTTTGCCCACCAAGTTCATGGTGGGGAC...GGCCCTCTTCTGCCTCCGGGTGCAGGACAATGGGTGTCTCATCGCCTGCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR TCA 72 bp GATGTCCCACCACATGACCTGCCCATCCGTGGAAGCTaGGAAGCACTCGGTGCCCGTCTTCGACTGCAGCCA +
Preference number: 3 (lower is better)
Translates to: DVPPHDLPIRGS*EALGARLRLQP
Trigger: TGGCTGCAGTCGAAGACGGGCACCGAGTGCTTCTCAGCTTCCACGGATGGGCAGGTCATGTGGTGGGACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR GCA 72 bp GGCTGGACTCAATGGTGGATAGCTCCGCCACCAGGCTaGCCTTTCGGGTGTCCCAGCAGGCTATCTGTCCAT +
Preference number: 3 (lower is better)
Translates to: GWTQWWIAPPPG*PFGCPSRLSVH
Trigger: ATGGACAGATAGCCTGCTGGGACACCCGAAAGGGCAGCCTGGTGGCGGAGCTATCCACCATTGAGTCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR GCA 72 bp AGCACTCGGTGCCCGTCTTCGACTGCAGCCAGATGGTaGCATACACAGGGTCTCGGTGGCTGGACTCAATGG +
Preference number: 3 (lower is better)
Translates to: STRCPSSTAARW*HTQGLGGWTQW
Trigger: CCATTGAGTCCAGCCACCGAGACCCTGTGTATGGCACCATCTGGCTGCAGTCGAAGACGGGCACCGAGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR GCA 72 bp TCCTCCACCACCTGGTCTTCTTCTGGACTTGGTTGCTaGCTTCTCCTTCAGCCGCATCTCCCGGTGCCTGGC +
Preference number: 3 (lower is better)
Translates to: SSTTWSSSGLGC*LLLQPHLPVPG
Trigger: GCCAGGCACCGGGAGATGCGGCTGAAGGAGAAGGCAGCAACCAAGTCCAGAAGAAGACCAGGTGGTGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CCA 72 bp GCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTaGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGA +
Preference number: 3 (lower is better)
Translates to: ARPLPHTWRLLS*QCVQMVRELPG
Trigger: TCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR CCA 72 bp AGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTaGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTC +
Preference number: 3 (lower is better)
Translates to: SQARPARPLPHT*RLLSWQCVQMV
Trigger: GACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR CCA 72 bp TGCCATACACAGGGTCTCGGTGGCTGGACTCAATGGTaGATAGCTCCGCCACCAGGCTGCCCTTTCGGGTGT +
Preference number: 3 (lower is better)
Translates to: CHTQGLGGWTQW*IAPPPGCPFGC
Trigger: ACACCCGAAAGGGCAGCCTGGTGGCGGAGCTATCCACCATTGAGTCCAGCCACCGAGACCCTGTGTATGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CCA 72 bp GACTGCAGCCAGATGGTGCCATACACAGGGTCTCGGTaGCTGGACTCAATGGTGGATAGCTCCGCCACCAGG +
Preference number: 3 (lower is better)
Translates to: DCSQMVPYTGSR*LDSMVDSSATR
Trigger: CCTGGTGGCGGAGCTATCCACCATTGAGTCCAGCCACCGAGACCCTGTGTATGGCACCATCTGGCTGCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR CAA 90 bp GGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGTCCCCTCCCACATACTaGGAGGCTCCTGTCGTGGCA +
Preference number: 3 (lower is better)
Translates to: GGSIMEEKPFPTPEGLPESPPTY*EAPVVA
Trigger: TGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGA...CTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR CAA 90 bp CATGATGGACGATTCCCGGCTGTCTTCAGACCAAATGCGGGCTGTCCAGTCGCCGTCTTGGCCTTGCGGTaGCAGGAGATGACGATGCCC +
Preference number: 3 (lower is better)
Translates to: HDGRFPAVFRPNAGCPVAVLALR*QEMTMP
Trigger: GGGCATCGTCATCTCCTGCAACCGCAAGGCCAAGAC...GGCGACTGGACAGCCCGCATTTGGTCTGAAGACAGCCGGGAATCGTCCATCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR TCA 72 bp AGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTaGAGGTCTTCCCGAGGCCCTGCCATGGCCATGCAA +
Preference number: 3 (lower is better)
Translates to: RVDHGGETLPHS*RSSRGPAMAMQ
Trigger: TTGCATGGCCATGGCAGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR GCA 72 bp GGAGGGCGTAGATGGGGCCATGATGGCCCGGGAAGGTaGACACAATCTTTTCAGCTGACGTCTTGGCCTTGC +
Preference number: 3 (lower is better)
Translates to: GGRRWGHDGPGR*TQSFQLTSWPC
Trigger: GCAAGGCCAAGACGTCAGCTGAAAAGATTGTGTGCACCTTCCCGGGCCATCATGGCCCCATCTACGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CCA 72 bp AGAAGCACTCGGTGCCCGTCTTCGACTGCAGCCAGATaGTGCCATACACAGGGTCTCGGTGGCTGGACTCAA +
Preference number: 3 (lower is better)
Translates to: RSTRCPSSTAAR*CHTQGLGGWTQ
Trigger: TTGAGTCCAGCCACCGAGACCCTGTGTATGGCACCATCTGGCTGCAGTCGAAGACGGGCACCGAGTGCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR GCA 72 bp GTCTTGGCCTTGCGGTTGCAGGAGATGACGATGCCCTaGTCGGTCCCCACCATGAACTTGGTGGGCAAAGTA +
Preference number: 3 (lower is better)
Translates to: VLALRLQEMTMP*SVPTMNLVGKV
Trigger: TACTTTGCCCACCAAGTTCATGGTGGGGACCGAGCAGGGCATCGTCATCTCCTGCAACCGCAAGGCCAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CCA 72 bp TCTTCGGGTAGAAGGGGTTTCTCTGGAGGGCGTAGATaGGGCCATGATGGCCCGGGAAGGTGCACACAATCT +
Preference number: 3 (lower is better)
Translates to: SSGRRGFSGGRR*GHDGPGRCTQS
Trigger: AGATTGTGTGCACCTTCCCGGGCCATCATGGCCCCATCTACGCCCTCCAGAGAAACCCCTTCTACCCGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR CAA 90 bp GGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTGCCATGCAAGTCTGGTaGAGGGTCAAGAGGTGGGAA +
Preference number: 3 (lower is better)
Translates to: GRGGSIMEEKPFPTPEGLAMQVW*RVKRWE
Trigger: TTCCCACCTCTTGACCCTCAACCAGACTTGCATGGC...AAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR-3UTR CAA 90 bp AGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTAGCCATGCAAGTCTGGTaGAGGGTCAAGAGGTGGGAA +
Preference number: 3 (lower is better)
Translates to: RLLSWQCVQMVRELPGKVAMQVW*RVKRWE
Trigger: TTCCCACCTCTTGACCCTCAACCAGACTTGCATGGC...TACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR TCA 72 bp AGCAGCCACCCAGGAGTACGTGGGAATCTTTGGGGTTaGACTCCAACGTCACGAGTGGAGACGATGGCTTCA +
Preference number: 3 (lower is better)
Translates to: SSHPGVRGNLWG*TPTSRVETMAS
Trigger: TGAAGCCATCGTCTCCACTCGTGACGTTGGAGTTCAACCCCAAAGATTCCCACGTACTCCTGGGTGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR GCA 72 bp TCGTCACACACCTTCAAGCTGAGGGTGGGATCGCACTaGTCGAACATGAAGTCCCAGATATCCAGGGTTCCG +
Preference number: 3 (lower is better)
Translates to: SSHTFKLRVGSH*SNMKSQISRVP
Trigger: CGGAACCCTGGATATCTGGGACTTCATGTTCGAGCAGTGCGATCCCACCCTCAGCTTGAAGGTGTGTGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CCA 72 bp TCAAACATGGAAGAGGCTACGTTCTTCTCATTCCTCTaGAGGGTAGAGAGCCCAGGCGAGACCTCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: SNMEEATFFSFL*RVESPGETSSR
Trigger: CCTGCTGGAGGTCTCGCCTGGGCTCTCTACCCTCCAGAGGAATGAGAAGAACGTAGCCTCTTCCATGTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR TCA 72 bp ATGATGGCCCGGGAAGGTGCACACAATCTTTTCAGCTaGCGTCTTGGCCTTGCGGTTGCAGGAGATGACGAT +
Preference number: 3 (lower is better)
Translates to: MMAREGAHNLFS*RLGLAVAGDDD
Trigger: ATCGTCATCTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAAAGATTGTGTGCACCTTCCCGGGCCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR CAA 90 bp CATGATGGACGATTCCCGGCTGTCTTCAGACCAAATGCGGGCTGTCCAGTCGCCTCCAACTGTTCCTTCTaGGTGATGTCCAAGATCACA +
Preference number: 3 (lower is better)
Translates to: HDGRFPAVFRPNAGCPVASNCSF*VMSKIT
Trigger: TGTGATCTTGGACATCACCAAGAAGGAACAGTTGGA...GGCGACTGGACAGCCCGCATTTGGTCTGAAGACAGCCGGGAATCGTCCATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR CAA 90 bp GCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTTGGGAATCTTTGGGGTaGAACTCCAACGTCACGAGT +
Preference number: 3 (lower is better)
Translates to: APVVAMCPNGQGAAWKGIWESLG*NSNVTS
Trigger: ACTCGTGACGTTGGAGTTCAACCCCAAAGATTCCCA...AATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR-3UTR CAA 90 bp GCTCCAGGCAGCATCAGTGAGGTAAGCCATGTGGTACTTGGTCCACATGATGGAAGTACGTGGGAATCTTaGGGGTTGAACTCCAACGTC +
Preference number: 3 (lower is better)
Translates to: APGSISEVSHVVLGPHDGSTWES*GLNSNV
Trigger: GACGTTGGAGTTCAACCCCAAAGATTCCCACGTACT...TCCATCATGTGGACCAAGTACCACATGGCTTACCTCACTGATGCTGCCTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR TCA 72 bp TGGCCCCCAAGGCATTTTCCAACTGTTCCTTCTTGGTaGTGTCCAAGATCACAACTTCAGTGGGCTCGCTCA +
Preference number: 3 (lower is better)
Translates to: WPPRHFPTVPSW*CPRSQLQWARS
Trigger: TGAGCGAGCCCACTGAAGTTGTGATCTTGGACATCACCAAGAAGGAACAGTTGGAAAATGCCTTGGGGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR GCA 72 bp TCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTaGCTGGAAAGGTATTTTCAAAGTGGACAGACTTTC +
Preference number: 3 (lower is better)
Translates to: SCRGNVSKWSGS*LERYFQSGQTF
Trigger: GAAAGTCTGTCCACTTTGAAAATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR CCA 72 bp TCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTaGACGAGGAGGGTCGATCATGGAGGAGAAACCCTT +
Preference number: 3 (lower is better)
Translates to: SKWTDFLFLICR*TRRVDHGGETL
Trigger: AAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR CCA 72 bp ATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATaGTCAGGGAGCTGCCTGGAAAGGTATTTTCAAAGT +
Preference number: 3 (lower is better)
Translates to: ILGGSCRGNVSK*SGSCLERYFQS
Trigger: ACTTTGAAAATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR CAA 72 bp GTCCCCAGCTGGGAGCCGCAGGCGATGAGACACCCATaGTCCTGCACCCGGAGGCAGAAGAGGGCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: VPSWEPQAMRHP*SCTRRQKRASS
Trigger: TGACGAGGCCCTCTTCTGCCTCCGGGTGCAGGACAATGGGTGTCTCATCGCCTGCGGCTCCCAGCTGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp AGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGGTCGCGGCTCCGGTaGTCCTCAAACGGCGGCGTT +
Preference number: 4 (lower is better)
Translates to: RTAKLVPPVPSHILGGSCRSRLR*SSNGGV
Trigger: AACGCCGCCGTTTGAGGAGCACCGGAGCCGCGACCG...ACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311014.11
ENST00000579055.5
ENST00000582036.5
CDS-3UTR GCA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACGCTCCGCCACCAGGCTaGCCTTTCGGGTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHAPPPG*PFGCPS
Trigger: GCTGGGACACCCGAAAGGGCAGCCTGGTGGCGGAGC...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp AGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCGGGAGCCGCAGGCGATaGGACACCCATTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SRTAKLVPPVPSHILGGSGSRRR*DTHCPA
Trigger: TGCAGGACAATGGGTGTCTCATCGCCTGCGGCTCCC...GGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
CDS-3UTR TCA 90 bp GGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGACCCTTCCCCACTCCTaGAGGTCTTCCCGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GAAEQPSSSRPSPPTYLETLPHS*RSSRGP
Trigger: AGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGT...CTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp AGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCACCCTTCCCCACTCCTaGAGGTCTTCCCGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SRTAKLVPPVPSHILGGSTLPHS*RSSRGP
Trigger: AGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGT...GGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CGGATGTCCCACCACATGACCTGCCCATCCGTGGAAGCTGAGAAGCACTCGGTGCGGTCGCGGCTCCGGTaGTCCTCAAACGGCGGCGTT +
Preference number: 4 (lower is better)
Translates to: RMSHHMTCPSVEAEKHSVRSRLR*SSNGGV
Trigger: AACGCCGCCGTTTGAGGAGCACCGGAGCCGCGACCG...CACCGAGTGCTTCTCAGCTTCCACGGATGGGCAGGTCATGTGGTGGGACATCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp GGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGAGCCGCATCTCCCGGTaGCTGGCCTCCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: GAAEQPSSSRPSPPTYLESRISR*LASRIF
Trigger: GAAGATCCTGGAGGCCAGGCACCGGGAGATGCGGCT...CTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCGCATCTCCCGGTGCCTGGCCTCCAGGATCTTCTCTCGCCGGGTCTCACGCTCATGCTGATCGAGCACTaGATGCCCGTGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: PHLPVPGLQDLLSPGLTLMLIEH*MPVSTG
Trigger: CCCAGTGGACACGGGCATCCAGTGCTCGATCAGCAT...GAGCGTGAGACCCGGCGAGAGAAGATCCTGGAGGCCAGGCACCGGGAGATGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CCA 90 bp CAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGGTGGTTGTCCCCAGCTaGGAGCCGCAGGCGATGAGA +
Preference number: 4 (lower is better)
Translates to: QVQQNSQARPARPLPHTWVVVPS*EPQAMR
Trigger: TCTCATCGCCTGCGGCTCCCAGCTGGGGACAACCAC...CCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp AGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCCGTGTTCCGACATGCTaGTCGAGCACTGGATGCCCG +
Preference number: 4 (lower is better)
Translates to: SRTAKLVPPVPSHILGGSRVPTC*SSTGCP
Trigger: CGGGCATCCAGTGCTCGATCAGCATGTCGGAACACG...GGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACCCCATCCGTGGAAGCTaGGAAGCACTCGGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHPIRGS*EALGAR
Trigger: ACGGGCACCGAGTGCTTCTCAGCTTCCACGGATGGG...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp AGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCCCATCCGTGGAAGCTaGGAAGCACTCGGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: RTAKLVPPVPSHILGGSCPIRGS*EALGAR
Trigger: ACGGGCACCGAGTGCTTCTCAGCTTCCACGGATGGG...ACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp CCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAACCCTTCCCCACTCCTaGAGGTCTTCCCGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PARPLPHTWRLLSWQCVQTLPHS*RSSRGP
Trigger: AGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGT...TTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGTGTGGCAGCCCTCTTaGTTTCCTGGGGGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: GAAEQPSSSRPSPPTYLEVWQPS*FPGGPE
Trigger: CTCTGGACCCCCAGGAAATCAAGAGGGCTGCCACAC...CTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp GGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGTTCCGCTCCACGAACTaGTCGGCCAGCTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: GAAEQPSSSRPSPPTYLEFRSTN*SASSGL
Trigger: CAACCCTGAGCTGGCCGAGCAGTTCGTGGAGCGGAA...CTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGTTCCGCTCCACGAACTaGTCGGCCAGCTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: QVQQNSQARPARPLPHTWFRSTN*SASSGL
Trigger: CAACCCTGAGCTGGCCGAGCAGTTCGTGGAGCGGAA...CCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGGCTCCGCCACCAGGCTaGCCTTTCGGGTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PVPSHILGGSCRGNVSKWAPPPG*PFGCPS
Trigger: GCTGGGACACCCGAAAGGGCAGCCTGGTGGCGGAGC...CCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGCTGAGAAGCACTCGGTaGCCGTCTTCGACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: QVQQNSQARPARPLPHTWLRSTR*PSSTAA
Trigger: GGCTGCAGTCGAAGACGGGCACCGAGTGCTTCTCAG...CCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACAGCCGCATCTCCCGGTaGCTGGCCTCCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHSRISR*LASRIF
Trigger: GAAGATCCTGGAGGCCAGGCACCGGGAGATGCGGCT...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp TCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAGCCGCATCTCCCGGTaGCTGGCCTCCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: SRPSPPTYLEAPVVAMCPSRISR*LASRIF
Trigger: GAAGATCCTGGAGGCCAGGCACCGGGAGATGCGGCT...TGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGGTCTTCCCGAGGCCCTaGCATGGCCATGCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: QVQQNSQARPARPLPHTWVFPRP*HGHASL
Trigger: CAGACTTGCATGGCCATGGCAGGGCCTCGGGAAGAC...CCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGGATGCCCGTGTCCACTaGGTTCCGCTCCACGAACTG +
Preference number: 4 (lower is better)
Translates to: QVQQNSQARPARPLPHTWDARVH*VPLHEL
Trigger: CAGTTCGTGGAGCGGAACCCAGTGGACACGGGCATC...CCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGGCTGGACTCAATGGTaGATAGCTCCGCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: GAAEQPSSSRPSPPTYLEGWTQW*IAPPPG
Trigger: GCCTGGTGGCGGAGCTATCCACCATTGAGTCCAGCC...CTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAAGACCTCCAGCAGGGTaGTTGTCCCCAGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PARPLPHTWRLLSWQCVQRPPAG*LSPAGS
Trigger: GCTCCCAGCTGGGGACAACCACCCTGCTGGAGGTCT...TTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp TCCTGCACCCGGAGGCAGAAGAGGGCCTCGTCACACACCTTCAAGCTGAGGGTGAGACCTCCAGCAGGGTaGTTGTCCCCAGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SCTRRQKRASSHTFKLRVRPPAG*LSPAGS
Trigger: GCTCCCAGCTGGGGACAACCACCCTGCTGGAGGTCT...CACCCTCAGCTTGAAGGTGTGTGACGAGGCCCTCTTCTGCCTCCGGGTGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CCA 90 bp TCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAGACCTCCAGCAGGGTaGTTGTCCCCAGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SRPSPPTYLEAPVVAMCPRPPAG*LSPAGS
Trigger: GCTCCCAGCTGGGGACAACCACCCTGCTGGAGGTCT...TGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGGCATCTCCCGGTGCCTaGCCTCCAGGATCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QVQQNSQARPARPLPHTWASPGA*PPGSSL
Trigger: GAGAGAAGATCCTGGAGGCCAGGCACCGGGAGATGC...CCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GGTGCCTGGCCTCCAGGATCTTCTCTCGCCGGGTCTCACGCTCAAACATGGAAGCCCATCCGTGGAAGCTaGGAAGCACTCGGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: GAWPPGSSLAGSHAQTWKPIRGS*EALGAR
Trigger: ACGGGCACCGAGTGCTTCTCAGCTTCCACGGATGGG...CTTCCATGTTTGAGCGTGAGACCCGGCGAGAGAAGATCCTGGAGGCCAGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp GCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTTGGGTCCGCTCCTTCTaGTTCTGGGTCTCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: AEQPSSSRPSPPTYLEAPWVRSF*FWVSGE
Trigger: TTCCCCAGAGACCCAGAAGCAGAAGGAGCGGACCCA...AGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311014.11
ENST00000579055.5
ENST00000582036.5
CDS-3UTR GCA 90 bp TCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAACACAATCTCCATGGTaGCGGCTGCCTGGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: SRPSPPTYLEAPVVAMCPTQSPW*RLPGSA
Trigger: AGCGGACCCAGGCAGCCGGCACCATGGAGATTGTGT...TGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311014.11
ENST00000579055.5
CDS-3UTR GCA 90 bp GCCCTGCTCGGTCCCCACCATGAACTTGGTGGGCAAAGTAGATTCGAACTCCAGGCTCCGCCACCAGGCTaGCCTTTCGGGTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ALLGPHHELGGQSRFELQAPPPG*PFGCPS
Trigger: GCTGGGACACCCGAAAGGGCAGCCTGGTGGCGGAGC...CTGGAGTTCGAATCTACTTTGCCCACCAAGTTCATGGTGGGGACCGAGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACCTGAGAAGCACTCGGTaGCCGTCTTCGACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHLRSTR*PSSTAA
Trigger: GGCTGCAGTCGAAGACGGGCACCGAGTGCTTCTCAG...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp TCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAGTCTTCCCGAGGCCCTaGCATGGCCATGCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: SRPSPPTYLEAPVVAMCPVFPRP*HGHASL
Trigger: CAGACTTGCATGGCCATGGCAGGGCCTCGGGAAGAC...TGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAGATGCCCGTGTCCACTaGGTTCCGCTCCACGAACTG +
Preference number: 4 (lower is better)
Translates to: PARPLPHTWRLLSWQCVQDARVH*VPLHEL
Trigger: CAGTTCGTGGAGCGGAACCCAGTGGACACGGGCATC...TTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp TCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAGATGCCCGTGTCCACTaGGTTCCGCTCCACGAACTG +
Preference number: 4 (lower is better)
Translates to: SRPSPPTYLEAPVVAMCPDARVH*VPLHEL
Trigger: CAGTTCGTGGAGCGGAACCCAGTGGACACGGGCATC...TGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGATGCTGATCGAGCACTaGATGCCCGTGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: GAAEQPSSSRPSPPTYLEMLIEH*MPVSTG
Trigger: CCCAGTGGACACGGGCATCCAGTGCTCGATCAGCAT...CTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp AGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCGGTGGCTGGACTCAATaGTGGATAGCTCCGCCACCA +
Preference number: 4 (lower is better)
Translates to: SRTAKLVPPVPSHILGGSGGWTQ*WIAPPP
Trigger: TGGTGGCGGAGCTATCCACCATTGAGTCCAGCCACC...GGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACGCATCTCCCGGTGCCTaGCCTCCAGGATCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHASPGA*PPGSSL
Trigger: GAGAGAAGATCCTGGAGGCCAGGCACCGGGAGATGC...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GTGGTTGTCCCCAGCTGGGAGCCGCAGGCGATGAGACACCCATTGTCCTGCACCCATCTCAAACCGCTCTaGGTTGGCCTCGTGTTCCGA +
Preference number: 4 (lower is better)
Translates to: VVVPSWEPQAMRHPLSCTHLKPL*VGLVFR
Trigger: TCGGAACACGAGGCCAACTCAGAGCGGTTTGAGATG...GGTGCAGGACAATGGGTGTCTCATCGCCTGCGGCTCCCAGCTGGGGACAACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR TCA 90 bp AGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCCAGGTCCCAGATGTATaGATCGCTGCTCATGCCCAC +
Preference number: 4 (lower is better)
Translates to: SRTAKLVPPVPSHILGGSQVPDV*IAAHAH
Trigger: GTGGGCATGAGCAGCGATTCATACATCTGGGACCTG...GGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp ATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGCCCTGCCATGCGGTTGCAGGAGATaGCGATGCCCTGCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: IMEEKPFPTPEGLPEALPCGCRR*RCPARS
Trigger: GGACCGAGCAGGGCATCGTCATCTCCTGCAACCGCA...TGGCAGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTCGCACTGCTCGAACATaGAGTCCCAGATATCCAGGG +
Preference number: 4 (lower is better)
Translates to: AEQPSSSRPSPPTYLEAPRTART*SPRYPG
Trigger: CCCTGGATATCTGGGACTTCATGTTCGAGCAGTGCG...AGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp ATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCCGGTCGCGGCTCCGGTaGTCCTCAAACGGCGGCGTT +
Preference number: 4 (lower is better)
Translates to: ICRWTRRVDHGGETLPHSRSRLR*SSNGGV
Trigger: AACGCCGCCGTTTGAGGAGCACCGGAGCCGCGACCG...GGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311014.11
ENST00000579055.5
ENST00000582036.5
CDS-3UTR GCA 90 bp AGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTCCGAGAAATTGCACTaGTTCCCGAACTCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: SRTAKLVPPVPSHILGGSSEKLH*FPNSLR
Trigger: GCGCAGCGAGTTCGGGAAGCAGTGCAATTTCTCGGA...GGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACGGCGGTCCGAGAAATTaGACTGCTTCCCGAACTCGC +
Preference number: 4 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHGGPRN*TASRTR
Trigger: GCGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCC...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACTGCCAACTTCCTGTTaGCATCGGGGTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: ESIQVQQNSQARPARPLPLPTSC*HRGARR
Trigger: TCTCCTGGCACCCCGATGGCAACAGGAAGTTGGCAG...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGATGAATCGCTGCTCATaGCCACAGGTGCCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: GAAEQPSSSRPSPPTYLEMNRCS*PQVPAE
Trigger: TTCAGCGGGCACCTGTGGGCATGAGCAGCGATTCAT...CTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTCCGCCACCAGGCTaGCCTTTCGGGTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PPTYLEAPVVAMCPNGQGAPPPG*PFGCPS
Trigger: GCTGGGACACCCGAAAGGGCAGCCTGGTGGCGGAGC...TCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCAGTGCCCGTCTTCGACTaGAGCCAGATGGTGCCATAC +
Preference number: 4 (lower is better)
Translates to: ESIQVQQNSQARPARPLPVPVFD*SQMVPY
Trigger: GTATGGCACCATCTGGCTGCAGTCGAAGACGGGCAC...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GGTGCCTGGCCTCCAGGATCTTCTCTCGCCGGGTCTCACGCTCAAACATGGAAGCTGAGAAGCACTCGGTaGCCGTCTTCGACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GAWPPGSSLAGSHAQTWKLRSTR*PSSTAA
Trigger: GGCTGCAGTCGAAGACGGGCACCGAGTGCTTCTCAG...CTTCCATGTTTGAGCGTGAGACCCGGCGAGAGAAGATCCTGGAGGCCAGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCATCCCACCACATGACCTaGCCATCCGTGGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ESIQVQQNSQARPARPLPSHHMT*PSVEAE
Trigger: CTCAGCTTCCACGGATGGGCAGGTCATGTGGTGGGA...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp AGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTGAGATGACGATGCCCTaGTCGGTCCCCACCATGAAC +
Preference number: 4 (lower is better)
Translates to: RTAKLVPPVPSHILGGSCEMTMP*SVPTMN
Trigger: GTTCATGGTGGGGACCGAGCAGGGCATCGTCATCTC...ACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCAAGACACCCATTGTCCTaGACCCGGAGGCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: ESIQVQQNSQARPARPLPRHPLS*TRRQKR
Trigger: CCTCTTCTGCCTCCGGGTGCAGGACAATGGGTGTCT...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
CDS-3UTR GCA 90 bp CCCTGCCATGGCCATGCAAGTCTGGTTGAGGGTCAAGAGGTGGGAAAGGAAGGCAGCCGCATCTCCCGGTaGCTGGCCTCCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: PCHGHASLVEGQEVGKEGSRISR*LASRIF
Trigger: GAAGATCCTGGAGGCCAGGCACCGGGAGATGCGGCT...GCCTTCCTTTCCCACCTCTTGACCCTCAACCAGACTTGCATGGCCATGGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGAGCCGCATCTCCCGGTaGCTGGCCTCCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: GGSCRGNVSKWSGSCLERSRISR*LASRIF
Trigger: GAAGATCCTGGAGGCCAGGCACCGGGAGATGCGGCT...CCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CCTTCAGCCGCATCTCCCGGTGCCTGGCCTCCAGGATCTTCTCTCGCCGGGTCTTCTTCTGGACTTGGTTaGTGCCTTCTCCTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: PSAASPGAWPPGSSLAGSSSGLG*CLLLQP
Trigger: CGGCTGAAGGAGAAGGCAGCAACCAAGTCCAGAAGA...AGACCCGGCGAGAGAAGATCCTGGAGGCCAGGCACCGGGAGATGCGGCTGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CCA 90 bp ATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGCCCTGCCAATGGTGCCGGCTGCCTaGGTCCGCTCCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: IMEEKPFPTPEGLPEALPMVPAA*VRSFCF
Trigger: GAAGCAGAAGGAGCGGACCCAGGCAGCCGGCACCAT...TGGCAGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311014.11
ENST00000579055.5
CDS-3UTR CCA 90 bp AGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTATGCTGATCGAGCACTaGATGCCCGTGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: RTAKLVPPVPSHILGGSCMLIEH*MPVSTG
Trigger: CCCAGTGGACACGGGCATCCAGTGCTCGATCAGCAT...ACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACGGTGGCTGGACTCAATaGTGGATAGCTCCGCCACCA +
Preference number: 4 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHGGWTQ*WIAPPP
Trigger: TGGTGGCGGAGCTATCCACCATTGAGTCCAGCCACC...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCAGGTGGCTGGACTCAATaGTGGATAGCTCCGCCACCA +
Preference number: 4 (lower is better)
Translates to: ESIQVQQNSQARPARPLPGGWTQ*WIAPPP
Trigger: TGGTGGCGGAGCTATCCACCATTGAGTCCAGCCACC...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTTCGACTGCAGCCAGATaGTGCCATACACAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: AEQPSSSRPSPPTYLEAPSTAAR*CHTQGL
Trigger: GAGACCCTGTGTATGGCACCATCTGGCTGCAGTCGA...AGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp AGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCCGAACTCCAGGGAGATaGCCCCCAAGGCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: SRTAKLVPPVPSHILGGSRTPGR*PPRHFP
Trigger: TGGAAAATGCCTTGGGGGCCATCTCCCTGGAGTTCG...GGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGGTGGTTGTCCCCAGCTaGGAGCCGCAGGCGATGAGA +
Preference number: 4 (lower is better)
Translates to: GGSCRGNVSKWSGSCLERVVVPS*EPQAMR
Trigger: TCTCATCGCCTGCGGCTCCCAGCTGGGGACAACCAC...CCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGCCCTCCTCCACCACCTaGTCTTCTTCTGGACTTGGT +
Preference number: 4 (lower is better)
Translates to: QVQQNSQARPARPLPHTWPSSTT*SSSGLG
Trigger: ACCAAGTCCAGAAGAAGACCAGGTGGTGGAGGAGGG...CCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp AGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCCCCTCCCACATACTTaGAGGCTCCTGTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: RTAKLVPPVPSHILGGSCPLPHT*RLLSWQ
Trigger: TTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGG...ACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR CAA 72 bp CAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTaGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGT +
Preference number: 4 (lower is better)
Translates to: QPSSSRPSPPTY*EAPVVAMCPNG
Trigger: ACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
3UTR CAA 72 bp TCCCTCCTCCACCACCTGGTCTTCTTCTGGACTTGGTaGCTGCCTTCTCCTTCAGCCGCATCTCCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: SLLHHLVFFWTW*LPSPSAASPGA
Trigger: GGCACCGGGAGATGCGGCTGAAGGAGAAGGCAGCAACCAAGTCCAGAAGAAGACCAGGTGGTGGAGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR TCA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATCTCAAACCGCTCTaGGTTGGCCTCGTGTTCCGA +
Preference number: 4 (lower is better)
Translates to: ESIQVQQNSQARPARPLPHLKPL*VGLVFR
Trigger: TCGGAACACGAGGCCAACTCAGAGCGGTTTGAGATG...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp CCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGCCCATCCGTGGAAGCTaGGAAGCACTCGGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: PLPHTWRLLSWQCVQMVRPIRGS*EALGAR
Trigger: ACGGGCACCGAGTGCTTCTCAGCTTCCACGGATGGG...CCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTTGCGGTTGCAGGAGATaGCGATGCCCTGCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: GRGGSIMEEKPFPTPEGLCGCRR*RCPARS
Trigger: GGACCGAGCAGGGCATCGTCATCTCCTGCAACCGCA...AAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACGGTACTTGGTCCACATaGTGGACGATTCCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHGTWST*WTIPGC
Trigger: ACAGCCGGGAATCGTCCATCATGTGGACCAAGTACC...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCAGGTACTTGGTCCACATaGTGGACGATTCCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: ESIQVQQNSQARPARPLPGTWST*WTIPGC
Trigger: ACAGCCGGGAATCGTCCATCATGTGGACCAAGTACC...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp CCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGGGAGCCGCAGGCGATaGGACACCCATTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PLPHTWRLLSWQCVQMVRGSRRR*DTHCPA
Trigger: TGCAGGACAATGGGTGTCTCATCGCCTGCGGCTCCC...CCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
CDS-3UTR TCA 90 bp AGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCCCATGCAAGTCTGGTTaGGGGTCAAGAGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SRTAKLVPPVPSHILGGSPCKSG*GSRGGK
Trigger: TTTCCCACCTCTTGACCCTCAACCAGACTTGCATGG...GGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTACCCTTCCCCACTCCTaGAGGTCTTCCCGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGTLPHS*RSSRGP
Trigger: AGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGT...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATTGTCCTTCAAGCTaGGGGTGGGATCGCACTGCT +
Preference number: 4 (lower is better)
Translates to: ESIQVQQNSQARPARPLPHCPSS*GWDRTA
Trigger: AGCAGTGCGATCCCACCCTCAGCTTGAAGGACAATG...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582036.5
CDS-3UTR GCA 90 bp CCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGACTCCATGGTGCCGGCTaGCTGGGTCCGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PPTYLEAPVVAMCPNGQGLHGAG*LGPLLL
Trigger: CAGAAGGAGCGGACCCAGGCAGCCGGCACCATGGAG...TCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311014.11
ENST00000579055.5
CDS-3UTR GCA 90 bp GGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTTCCGCTCCACGAACTaGTCGGCCAGCTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: GGSCRGNVSKWSGSCLERFRSTN*SASSGL
Trigger: CAACCCTGAGCTGGCCGAGCAGTTCGTGGAGCGGAA...CCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGCGGAAACGGATGGTCTaGTCCAGCTCCAGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: EEGRSWRRNPSPLLKVFPRKRMV*SSSRGF
Trigger: GAACCCCCTGGAGCTGGAGCAGACCATCCGTTTCCG...CGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GGCTACGTTCTTCTCATTCCTCTGGAGGGTAGAGAGCCCAGGCGAGACCTCCAGCGGAAACGGATGGTCTaGTCCAGCTCCAGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: GYVLLIPLEGREPRRDLQRKRMV*SSSRGF
Trigger: GAACCCCCTGGAGCTGGAGCAGACCATCCGTTTCCG...CTGGAGGTCTCGCCTGGGCTCTCTACCCTCCAGAGGAATGAGAAGAACGTAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp CGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATCGGAAACGGATGGTCTaGTCCAGCTCCAGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: RPSPPTYLEAPVVAMCPNRKRMV*SSSRGF
Trigger: GAACCCCCTGGAGCTGGAGCAGACCATCCGTTTCCG...ATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp ATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGCCCTGCCACTGTTGCCATCGGGGTaGCAGGAGAGGTGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: IMEEKPFPTPEGLPEALPLLPSG*QERCVA
Trigger: TGCCACACACCTCTCCTGGCACCCCGATGGCAACAG...TGGCAGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCAGGAGTATGCCACTaGCAACTTCCTGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: GAAEQPSSSRPSPPTYLEAGVCH*QLPVAI
Trigger: GATGGCAACAGGAAGTTGGCAGTGGCATACTCCTGC...CTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp AGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTATGAATCGCTGCTCATaGCCACAGGTGCCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: RTAKLVPPVPSHILGGSCMNRCS*PQVPAE
Trigger: TTCAGCGGGCACCTGTGGGCATGAGCAGCGATTCAT...ACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGAGATGTATGAATCGCTaGTCATGCCCACAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GAAEQPSSSRPSPPTYLERCMNR*SCPQVP
Trigger: GGGCACCTGTGGGCATGAGCAGCGATTCATACATCT...CTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATCTGAGAAGCACTCGGTaGCCGTCTTCGACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RPSPPTYLEAPVVAMCPNLRSTR*PSSTAA
Trigger: GGCTGCAGTCGAAGACGGGCACCGAGTGCTTCTCAG...ATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GATTCCCGGCTGTCTTCAGACCAAATGCGGGCTGTCCAGTCGCCAACCGTCAGGTCCCACCACATGACCTaGCCATCCGTGGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: DSRLSSDQMRAVQSPTVRSHHMT*PSVEAE
Trigger: CTCAGCTTCCACGGATGGGCAGGTCATGTGGTGGGA...CCTGACGGTTGGCGACTGGACAGCCCGCATTTGGTCTGAAGACAGCCGGGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp GCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTTGTCTTCAGACCAAATaGGGGCTGTCCAGTCGCCAA +
Preference number: 4 (lower is better)
Translates to: AEQPSSSRPSPPTYLEAPCLQTK*GLSSRQ
Trigger: TTGGCGACTGGACAGCCCGCATTTGGTCTGAAGACA...AGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp TCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAGGGTGGGATCGCACTaGTCGAACATGAAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SRPSPPTYLEAPVVAMCPRVGSH*SNMKSQ
Trigger: CTGGGACTTCATGTTCGAGCAGTGCGATCCCACCCT...TGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGAGCTCCTCATCGGTCTaGTCCTCATCCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: EGRSWRRNPSPLLKVFPRSSSSV*SSSLPS
Trigger: GGAGGGCAGGGATGAGGAGCAGACCGATGAGGAGCT...CCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp ATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGCCCTGCCAAGCTCCTCATCGGTCTaGTCCTCATCCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: IMEEKPFPTPEGLPEALPSSSSV*SSSLPS
Trigger: GGAGGGCAGGGATGAGGAGCAGACCGATGAGGAGCT...TGGCAGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAATATCTCCACAGGTCCTaGCAGGACAGCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PARPLPHTWRLLSWQCVQYLHRS*QDSSRF
Trigger: GAACCTGGAGCTGTCCTGGCAGGACCTGTGGAGATA...TTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
CDS-3UTR CCA 90 bp GGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGGATGCCCGTGTCCACTaGGTTCCGCTCCACGAACTG +
Preference number: 4 (lower is better)
Translates to: GGSCRGNVSKWSGSCLERDARVH*VPLHEL
Trigger: CAGTTCGTGGAGCGGAACCCAGTGGACACGGGCATC...CCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGGCCCTCTTGATTTCCTaGGGGTCCCTGAACACATTG +
Preference number: 4 (lower is better)
Translates to: QVQQNSQARPARPLPHTWALLIS*GSLNTL
Trigger: CAATGTGTTCAGGGACCCCCAGGAAATCAAGAGGGC...CCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGCCACCCAGGAGTACGTaGGAATCTTTGGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: GAAEQPSSSRPSPPTYLEPPRST*ESLGLN
Trigger: GTTCAACCCCAAAGATTCCCACGTACTCCTGGGTGG...CTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGGCTGGACTCAATGGTaGATAGCTCCGCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: GGSIMEEKPFPTPEGLPEGWTQW*IAPPPG
Trigger: GCCTGGTGGCGGAGCTATCCACCATTGAGTCCAGCC...CTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCCTGCCATGGCCATGCAAGTCTGGTTGAGGGTCAAGAGGTGGGAAAGGAAGGCGGCTGGACTCAATGGTaGATAGCTCCGCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: PCHGHASLVEGQEVGKEGGWTQW*IAPPPG
Trigger: GCCTGGTGGCGGAGCTATCCACCATTGAGTCCAGCC...GCCTTCCTTTCCCACCTCTTGACCCTCAACCAGACTTGCATGGCCATGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACAGGGTCTCGGTGGCTaGACTCAATGGTGGATAGCT +
Preference number: 4 (lower is better)
Translates to: ESIQVQQNSQARPARPLPQGLGG*TQWWIA
Trigger: AGCTATCCACCATTGAGTCCAGCCACCGAGACCCTG...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGAGACCTCCAGCAGGGTaGTTGTCCCCAGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PLPHTWRLLSWQCVQMVRRPPAG*LSPAGS
Trigger: GCTCCCAGCTGGGGACAACCACCCTGCTGGAGGTCT...CCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGGCATCTCCCGGTGCCTaGCCTCCAGGATCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GGSCRGNVSKWSGSCLERASPGA*PPGSSL
Trigger: GAGAGAAGATCCTGGAGGCCAGGCACCGGGAGATGC...CCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGCATCTCCCGGTGCCTaGCCTCCAGGATCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GGSIMEEKPFPTPEGLPEASPGA*PPGSSL
Trigger: GAGAGAAGATCCTGGAGGCCAGGCACCGGGAGATGC...CTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGCTGGCGTCAGCTTTATaGCGTCTGCCTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: QVQQNSQARPARPLPHTWLASAL*RLPPSS
Trigger: AGAAGAAGGAGGCAGACGCCATAAAGCTGACGCCAG...CCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGTGGAGGCTCCTGTCGTaGCAATGTGTCCAAATGGTC +
Preference number: 4 (lower is better)
Translates to: QVQQNSQARPARPLPHTWWRLLS*QCVQMV
Trigger: GACCATTTGGACACATTGCCACGACAGGAGCCTCCA...CCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAGCAGGAAGCAAGGGGTaGTGGGGAGATCCTAGGAAT +
Preference number: 4 (lower is better)
Translates to: PARPLPHTWRLLSWQCVQAGSKG*WGDPRN
Trigger: ATTCCTAGGATCTCCCCACCACCCCTTGCTTCCTGC...TTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
CDS-3UTR TCA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCAGGGAATCTTTGGGGTTaGACTCCAACGTCACGAGTG +
Preference number: 4 (lower is better)
Translates to: ESIQVQQNSQARPARPLPGNLWG*TPTSRV
Trigger: CACTCGTGACGTTGGAGTTCAACCCCAAAGATTCCC...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp AGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTGGGAATCTTTGGGGTTaGACTCCAACGTCACGAGTG +
Preference number: 4 (lower is better)
Translates to: RTAKLVPPVPSHILGGSCGNLWG*TPTSRV
Trigger: CACTCGTGACGTTGGAGTTCAACCCCAAAGATTCCC...ACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTCACAATCTTTTCAGCTaGCGTCTTGGCCTTGCGGTT +
Preference number: 4 (lower is better)
Translates to: AEQPSSSRPSPPTYLEAPHNLFS*RLGLAV
Trigger: AACCGCAAGGCCAAGACGTCAGCTGAAAAGATTGTG...AGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp AGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCCACAATCTTTTCAGCTaGCGTCTTGGCCTTGCGGTT +
Preference number: 4 (lower is better)
Translates to: SRTAKLVPPVPSHILGGSHNLFS*RLGLAV
Trigger: AACCGCAAGGCCAAGACGTCAGCTGAAAAGATTGTG...GGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGCACACACCTTCAAGCTaGGGGTGGGATCGCACTGCT +
Preference number: 4 (lower is better)
Translates to: GGSIMEEKPFPTPEGLPEHTPSS*GWDRTA
Trigger: AGCAGTGCGATCCCACCCTCAGCTTGAAGGTGTGTG...CTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
CDS-3UTR TCA 90 bp AGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTAGGGAGCCGCAGGCGATaGGACACCCATTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RLLSWQCVQMVRELPGKVGSRRR*DTHCPA
Trigger: TGCAGGACAATGGGTGTCTCATCGCCTGCGGCTCCC...TACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
CDS-3UTR TCA 90 bp AGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTCAGCTCTGCGAAGATaGTGTCGAAGAACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRTAKLVPPVPSHILGGSSALRR*CRRTPP
Trigger: AGGAGGAGTTCTTCGACATCATCTTCGCAGAGCTGA...GGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTACACAATCTCCATGGTaGCGGCTGCCTGGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGTQSPW*RLPGSA
Trigger: AGCGGACCCAGGCAGCCGGCACCATGGAGATTGTGT...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311014.11
ENST00000579055.5
CDS-3UTR GCA 90 bp ATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGCCCTGCCAGGCGGTCCGAGAAATTaGACTGCTTCCCGAACTCGC +
Preference number: 4 (lower is better)
Translates to: IMEEKPFPTPEGLPEALPGGPRN*TASRTR
Trigger: GCGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCC...TGGCAGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp AGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTTCTGCTTGATGCAGTaGTCCATGATAGAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: SRTAKLVPPVPSHILGGSFCLMQ*SMIEPS
Trigger: GCTCGGCTCTATCATGGAGCACTGCATCAAGCAGAA...GGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCCTGCCAACTTCCTGTTaGCATCGGGGTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RGGSIMEEKPFPTPEGLPLPTSC*HRGARR
Trigger: TCTCCTGGCACCCCGATGGCAACAGGAAGTTGGCAG...GGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACGCAGGAGTATGCCACTaGCAACTTCCTGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHAGVCH*QLPVAI
Trigger: GATGGCAACAGGAAGTTGGCAGTGGCATACTCCTGC...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GATTCCCGGCTGTCTTCAGACCAAATGCGGGCTGTCCAGTCGCCAACCGTCAGGGCTCATGCCCACAGGTaGCCGCTGAAAATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: DSRLSSDQMRAVQSPTVRAHAHR*PLKIQA
Trigger: TGCTTGGATTTTCAGCGGGCACCTGTGGGCATGAGC...CCTGACGGTTGGCGACTGGACAGCCCGCATTTGGTCTGAAGACAGCCGGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp CCTGGCCTCCAGGATCTTCTCTCGCCGGGTCTCACGCTCAAACATGGAAGAGGCATGAATCGCTGCTCATaGCCACAGGTGCCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: PGLQDLLSPGLTLKHGRGMNRCS*PQVPAE
Trigger: TTCAGCGGGCACCTGTGGGCATGAGCAGCGATTCAT...GCCTCTTCCATGTTTGAGCGTGAGACCCGGCGAGAGAAGATCCTGGAGGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp AGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTAGATGTATGAATCGCTaGTCATGCCCACAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: RTAKLVPPVPSHILGGSCRCMNR*SCPQVP
Trigger: GGGCACCTGTGGGCATGAGCAGCGATTCATACATCT...ACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAAGATGTATGAATCGCTaGTCATGCCCACAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PARPLPHTWRLLSWQCVQRCMNR*SCPQVP
Trigger: GGGCACCTGTGGGCATGAGCAGCGATTCATACATCT...TTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGGTGCCCGTCTTCGACTaGAGCCAGATGGTGCCATAC +
Preference number: 4 (lower is better)
Translates to: PVPSHILGGSCRGNVSKWVPVFD*SQMVPY
Trigger: GTATGGCACCATCTGGCTGCAGTCGAAGACGGGCAC...CCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATTCCCACCACATGACCTaGCCATCCGTGGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: RPSPPTYLEAPVVAMCPNSHHMT*PSVEAE
Trigger: CTCAGCTTCCACGGATGGGCAGGTCATGTGGTGGGA...ATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTCAGCTTTATGGCGTCTaGCTCCTTCTTCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: AEQPSSSRPSPPTYLEAPQLYGV*LLLLQL
Trigger: GAGCTGAAGAAGAAGGAGGCAGACGCCATAAAGCTG...AGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTGATGCCCGTGTCCACTaGGTTCCGCTCCACGAACTG +
Preference number: 4 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGDARVH*VPLHEL
Trigger: CAGTTCGTGGAGCGGAACCCAGTGGACACGGGCATC...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGATGCTGATCGAGCACTaGATGCCCGTGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: PVPSHILGGSCRGNVSKWMLIEH*MPVSTG
Trigger: CCCAGTGGACACGGGCATCCAGTGCTCGATCAGCAT...CCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTCAAGTTCAGGCTTGTTaGGGTTTTCCAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: AEQPSSSRPSPPTYLEAPQVQAC*GFPGPR
Trigger: TCTGGGACCTGGAAAACCCCAACAAGCCTGAACTTG...AGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGCAAGTTCAGGCTTGTTaGGGTTTTCCAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GAAEQPSSSRPSPPTYLEQVQAC*GFPGPR
Trigger: TCTGGGACCTGGAAAACCCCAACAAGCCTGAACTTG...CTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACACGAGTGGAGACGATaGCTTCAGAGCAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: ESIQVQQNSQARPARPLPHEWRR*LQSKFR
Trigger: CCTGAACTTGCTCTGAAGCCATCGTCTCCACTCGTG...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CGGATGTCCCACCACATGACCTGCCCATCCGTGGAAGCTGAGAAGCACTCGGTGCTCCAACGTCACGAGTaGAGACGATGGCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: RMSHHMTCPSVEAEKHSVLQRHE*RRWLQS
Trigger: GCTCTGAAGCCATCGTCTCCACTCGTGACGTTGGAG...CACCGAGTGCTTCTCAGCTTCCACGGATGGGCAGGTCATGTGGTGGGACATCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CCA 90 bp CCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAACCACCCAGGAGTACGTaGGAATCTTTGGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: PARPLPHTWRLLSWQCVQPPRST*ESLGLN
Trigger: GTTCAACCCCAAAGATTCCCACGTACTCCTGGGTGG...TTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCCTGCCATGGCCATGCAAGTCTGGTTGAGGGTCAAGAGGTGGGAAAGGAAGGCGGTGGCTGGACTCAATaGTGGATAGCTCCGCCACCA +
Preference number: 4 (lower is better)
Translates to: PCHGHASLVEGQEVGKEGGGWTQ*WIAPPP
Trigger: TGGTGGCGGAGCTATCCACCATTGAGTCCAGCCACC...GCCTTCCTTTCCCACCTCTTGACCCTCAACCAGACTTGCATGGCCATGGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp TCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCATACACAGGGTCTCGGTaGCTGGACTCAATGGTGGAT +
Preference number: 4 (lower is better)
Translates to: SRPSPPTYLEAPVVAMCPYTGSR*LDSMVD
Trigger: ATCCACCATTGAGTCCAGCCACCGAGACCCTGTGTA...TGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GATTCCCGGCTGTCTTCAGACCAAATGCGGGCTGTCCAGTCGCCAACCGTCAGGCGAACTCCAGGGAGATaGCCCCCAAGGCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: DSRLSSDQMRAVQSPTVRRTPGR*PPRHFP
Trigger: TGGAAAATGCCTTGGGGGCCATCTCCCTGGAGTTCG...CCTGACGGTTGGCGACTGGACAGCCCGCATTTGGTCTGAAGACAGCCGGGAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CCA 90 bp TCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCATTTCAGCTGACGTCTTaGCCTTGCGGTTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SRPSPPTYLEAPVVAMCPFQLTS*PCGCRR
Trigger: TCTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAA...TGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGTCTGGAGGGCGTAGATaGGGCCATGATGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: PHTWRLLSWQCVQMVRELSGGRR*GHDGPG
Trigger: TCCCGGGCCATCATGGCCCCATCTACGCCCTCCAGA...CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp AGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATCTGGAGGGCGTAGATaGGGCCATGATGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: RLLSWQCVQMVRELPGKVSGGRR*GHDGPG
Trigger: TCCCGGGCCATCATGGCCCCATCTACGCCCTCCAGA...TACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp ATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCGTGGTTGTCCCCAGCTaGGAGCCGCAGGCGATGAGA +
Preference number: 4 (lower is better)
Translates to: ICRWTRRVDHGGETLPHSVVVPS*EPQAMR
Trigger: TCTCATCGCCTGCGGCTCCCAGCTGGGGACAACCAC...GGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGTGGTTGTCCCCAGCTaGGAGCCGCAGGCGATGAGA +
Preference number: 4 (lower is better)
Translates to: PPTYLEAPVVAMCPNGQGVVVPS*EPQAMR
Trigger: TCTCATCGCCTGCGGCTCCCAGCTGGGGACAACCAC...TCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATGTGGTTGTCCCCAGCTaGGAGCCGCAGGCGATGAGA +
Preference number: 4 (lower is better)
Translates to: GSCRGNVSKWSGSCLERYVVVPS*EPQAMR
Trigger: TCTCATCGCCTGCGGCTCCCAGCTGGGGACAACCAC...ATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAATTCTTCTCATTCCTCTaGAGGGTAGAGAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PARPLPHTWRLLSWQCVQFFSFL*RVESPG
Trigger: GCCTGGGCTCTCTACCCTCCAGAGGAATGAGAAGAA...TTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTGCATCTCCCGGTGCCTaGCCTCCAGGATCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGASPGA*PPGSSL
Trigger: GAGAGAAGATCCTGGAGGCCAGGCACCGGGAGATGC...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp TCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCACTGGCGTCAGCTTTATaGCGTCTGCCTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SRPSPPTYLEAPVVAMCPLASAL*RLPPSS
Trigger: AGAAGAAGGAGGCAGACGCCATAAAGCTGACGCCAG...TGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCATGGAGGCTCCTGTCGTaGCAATGTGTCCAAATGGTC +
Preference number: 4 (lower is better)
Translates to: ESIQVQQNSQARPARPLPWRLLS*QCVQMV
Trigger: GACCATTTGGACACATTGCCACGACAGGAGCCTCCA...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCCTGCCATGGCCATGCAAGTCTGGTTGAGGGTCAAGAGGTGGGAAAGGAAGGCCCCCTCCCACATACTTaGAGGCTCCTGTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: PCHGHASLVEGQEVGKEGPLPHT*RLLSWQ
Trigger: TTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGG...GCCTTCCTTTCCCACCTCTTGACCCTCAACCAGACTTGCATGGCCATGGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGTCCATGGTGCCGGCCTaGGTCCGCTCCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PHTWRLLSWQCVQMVRELSMVPA*VRSFCF
Trigger: GAAGCAGAAGGAGCGGACCCAGGCCGGCACCATGGA...CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582036.5
CDS-3UTR TCA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACACTCGCTGCGCTTCTTaGCGTACACGTACACAATCT +
Preference number: 4 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHTRCAS*RTRTQS
Trigger: AGATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGT...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp CTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCGTGTTCCGACATGCTaGTCGAGCACTGGATGCCCG +
Preference number: 4 (lower is better)
Translates to: LPHTWRLLSWQCVQMVRERVPTC*SSTGCP
Trigger: CGGGCATCCAGTGCTCGATCAGCATGTCGGAACACG...CTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp CCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGACGTGTTCCGACATGCTaGTCGAGCACTGGATGCCCG +
Preference number: 4 (lower is better)
Translates to: PPTYLEAPVVAMCPNGQGRVPTC*SSTGCP
Trigger: CGGGCATCCAGTGCTCGATCAGCATGTCGGAACACG...TCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATCGTGTTCCGACATGCTaGTCGAGCACTGGATGCCCG +
Preference number: 4 (lower is better)
Translates to: GSCRGNVSKWSGSCLERYRVPTC*SSTGCP
Trigger: CGGGCATCCAGTGCTCGATCAGCATGTCGGAACACG...ATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGCATCTCAAACCGCTCTaGGTTGGCCTCGTGTTCCGA +
Preference number: 4 (lower is better)
Translates to: GGSCRGNVSKWSGSCLERHLKPL*VGLVFR
Trigger: TCGGAACACGAGGCCAACTCAGAGCGGTTTGAGATG...CCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGCATCTCAAACCGCTCTaGGTTGGCCTCGTGTTCCGA +
Preference number: 4 (lower is better)
Translates to: EGRSWRRNPSPLLKVFPRHLKPL*VGLVFR
Trigger: TCGGAACACGAGGCCAACTCAGAGCGGTTTGAGATG...CCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGCATCTCAAACCGCTCTaGGTTGGCCTCGTGTTCCGA +
Preference number: 4 (lower is better)
Translates to: EEGRSWRRNPSPLLKVFPHLKPL*VGLVFR
Trigger: TCGGAACACGAGGCCAACTCAGAGCGGTTTGAGATG...CGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp ATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGCCCTGCCACCCACAGGTGCCCGCTaGAAATCCAAGCAGGAGTAT +
Preference number: 4 (lower is better)
Translates to: IMEEKPFPTPEGLPEALPPTGAR*KSKQEY
Trigger: ATACTCCTGCTTGGATTTTCAGCGGGCACCTGTGGG...TGGCAGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGCCCACAGGTGCCCGCTaGAAATCCAAGCAGGAGTAT +
Preference number: 4 (lower is better)
Translates to: GGSIMEEKPFPTPEGLPEPTGAR*KSKQEY
Trigger: ATACTCCTGCTTGGATTTTCAGCGGGCACCTGTGGG...CTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp CGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATCCCACAGGTGCCCGCTaGAAATCCAAGCAGGAGTAT +
Preference number: 4 (lower is better)
Translates to: RPSPPTYLEAPVVAMCPNPTGAR*KSKQEY
Trigger: ATACTCCTGCTTGGATTTTCAGCGGGCACCTGTGGG...ATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp CGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCCAGGTCCCAGATGTATaGATCGCTGCTCATGCCCAC +
Preference number: 4 (lower is better)
Translates to: RGGSIMEEKPFPTPEGLPQVPDV*IAAHAH
Trigger: GTGGGCATGAGCAGCGATTCATACATCTGGGACCTG...GGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTTGCGGTTGCAGGAGATaGCGATGCCCTGCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: APVVAMCPNGQGAAWKGICGCRR*RCPARS
Trigger: GGACCGAGCAGGGCATCGTCATCTCCTGCAACCGCA...AATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp CGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATCGCACTGCTCGAACATaGAGTCCCAGATATCCAGGG +
Preference number: 4 (lower is better)
Translates to: RPSPPTYLEAPVVAMCPNRTART*SPRYPG
Trigger: CCCTGGATATCTGGGACTTCATGTTCGAGCAGTGCG...ATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGCGCACTGCTCGAACATaGAGTCCCAGATATCCAGGG +
Preference number: 4 (lower is better)
Translates to: EEGRSWRRNPSPLLKVFPRTART*SPRYPG
Trigger: CCCTGGATATCTGGGACTTCATGTTCGAGCAGTGCG...CGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp CCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAATCAGCTCTGCGAAGATaGTGTCGAAGAACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PARPLPHTWRLLSWQCVQSALRR*CRRTPP
Trigger: AGGAGGAGTTCTTCGACATCATCTTCGCAGAGCTGA...TTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGATTCCGCTCCACGAACTaGTCGGCCAGCTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: PPTYLEAPVVAMCPNGQGFRSTN*SASSGL
Trigger: CAACCCTGAGCTGGCCGAGCAGTTCGTGGAGCGGAA...TCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp AGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTACTGTTGCCATCGGGGTaGCAGGAGAGGTGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: RLLSWQCVQMVRELPGKVLLPSG*QERCVA
Trigger: TGCCACACACCTCTCCTGGCACCCCGATGGCAACAG...TACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp AGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCATCCAAGCAGGAGTATaGCACTGCCAACTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SRTAKLVPPVPSHILGGSIQAGV*HCQLPV
Trigger: AACAGGAAGTTGGCAGTGGCATACTCCTGCTTGGAT...GGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGGCTCATGCCCACAGGTaGCCGCTGAAAATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: EEGRSWRRNPSPLLKVFPAHAHR*PLKIQA
Trigger: TGCTTGGATTTTCAGCGGGCACCTGTGGGCATGAGC...CGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATATGAATCGCTGCTCATaGCCACAGGTGCCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: RPSPPTYLEAPVVAMCPNMNRCS*PQVPAE
Trigger: TTCAGCGGGCACCTGTGGGCATGAGCAGCGATTCAT...ATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp ATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCCTGAGAAGCACTCGGTaGCCGTCTTCGACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: ICRWTRRVDHGGETLPHSLRSTR*PSSTAA
Trigger: GGCTGCAGTCGAAGACGGGCACCGAGTGCTTCTCAG...GGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTGAGATGACGATGCCCTaGTCGGTCCCCACCATGAAC +
Preference number: 4 (lower is better)
Translates to: GRGGSIMEEKPFPTPEGLEMTMP*SVPTMN
Trigger: GTTCATGGTGGGGACCGAGCAGGGCATCGTCATCTC...AAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCGAGATGACGATGCCCTaGTCGGTCCCCACCATGAAC +
Preference number: 4 (lower is better)
Translates to: DNRKHSGAAEQPSSSRPSEMTMP*SVPTMN
Trigger: GTTCATGGTGGGGACCGAGCAGGGCATCGTCATCTC...GGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CCCTGCCATGGCCATGCAAGTCTGGTTGAGGGTCAAGAGGTGGGAAAGGAAGGCAGGGTGGGATCGCACTaGTCGAACATGAAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PCHGHASLVEGQEVGKEGRVGSH*SNMKSQ
Trigger: CTGGGACTTCATGTTCGAGCAGTGCGATCCCACCCT...GCCTTCCTTTCCCACCTCTTGACCCTCAACCAGACTTGCATGGCCATGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATAGGGTGGGATCGCACTaGTCGAACATGAAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: RPSPPTYLEAPVVAMCPNRVGSH*SNMKSQ
Trigger: CTGGGACTTCATGTTCGAGCAGTGCGATCCCACCCT...ATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCAGACACCCATTGTCCTaGACCCGGAGGCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: DNRKHSGAAEQPSSSRPSRHPLS*TRRQKR
Trigger: CCTCTTCTGCCTCCGGGTGCAGGACAATGGGTGTCT...GGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
CDS-3UTR GCA 90 bp AGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTAAGCTCCTCATCGGTCTaGTCCTCATCCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RLLSWQCVQMVRELPGKVSSSSV*SSSLPS
Trigger: GGAGGGCAGGGATGAGGAGCAGACCGATGAGGAGCT...TACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACAGCTTTATGGCGTCTaGCTCCTTCTTCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: ESIQVQQNSQARPARPLPQLYGV*LLLLQL
Trigger: GAGCTGAAGAAGAAGGAGGCAGACGCCATAAAGCTG...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATGTCTTCCCGAGGCCCTaGCATGGCCATGCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: GSCRGNVSKWSGSCLERYVFPRP*HGHASL
Trigger: CAGACTTGCATGGCCATGGCAGGGCCTCGGGAAGAC...ATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCCTGCCATGGCCATGCAAGTCTGGTTGAGGGTCAAGAGGTGGGAAAGGAAGGCCTGCTTCTGGGTCTCTaGGGAAGCGTTCAATCCACG +
Preference number: 4 (lower is better)
Translates to: PCHGHASLVEGQEVGKEGLLLGL*GSVQST
Trigger: CGTGGATTGAACGCTTCCCCAGAGACCCAGAAGCAG...GCCTTCCTTTCCCACCTCTTGACCCTCAACCAGACTTGCATGGCCATGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311014.11
ENST00000579055.5
ENST00000582036.5
CDS-3UTR CCA 90 bp TTCCCGGCTGTCTTCAGACCAAATGCGGGCTGTCCAGTCGCCAACCGTCAGGAACTGCTTCTGGGTCTCTaGGGAAGCGTTCAATCCACG +
Preference number: 4 (lower is better)
Translates to: FPAVFRPNAGCPVANRQELLLGL*GSVQST
Trigger: CGTGGATTGAACGCTTCCCCAGAGACCCAGAAGCAG...TTCCTGACGGTTGGCGACTGGACAGCCCGCATTTGGTCTGAAGACAGCCGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CCA 90 bp CCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGATGTTCAGCTCGGCCTaGCGGTCCGAGAAATTGCAC +
Preference number: 4 (lower is better)
Translates to: PVPSHILGGSCRGNVSKWMFSSA*RSEKLH
Trigger: GTGCAATTTCTCGGACCGCCAGGCCGAGCTGAACAT...CCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTATGCTGATCGAGCACTaGATGCCCGTGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: GRGGSIMEEKPFPTPEGLMLIEH*MPVSTG
Trigger: CCCAGTGGACACGGGCATCCAGTGCTCGATCAGCAT...AAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp ATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCGGCTGGACTCAATGGTaGATAGCTCCGCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: ICRWTRRVDHGGETLPHSGWTQW*IAPPPG
Trigger: GCCTGGTGGCGGAGCTATCCACCATTGAGTCCAGCC...GGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTGGTGGCTGGACTCAATaGTGGATAGCTCCGCCACCA +
Preference number: 4 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGGGWTQ*WIAPPP
Trigger: TGGTGGCGGAGCTATCCACCATTGAGTCCAGCCACC...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGCAGGGTCTCGGTGGCTaGACTCAATGGTGGATAGCT +
Preference number: 4 (lower is better)
Translates to: EGRSWRRNPSPLLKVFPRQGLGG*TQWWIA
Trigger: AGCTATCCACCATTGAGTCCAGCCACCGAGACCCTG...CCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTCGACTGCAGCCAGATaGTGCCATACACAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GGSCRGNVSKWSGSCLERSTAAR*CHTQGL
Trigger: GAGACCCTGTGTATGGCACCATCTGGCTGCAGTCGA...CCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCGACTGCAGCCAGATaGTGCCATACACAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PVPSHILGGSCRGNVSKWSTAAR*CHTQGL
Trigger: GAGACCCTGTGTATGGCACCATCTGGCTGCAGTCGA...CCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGCGAACTCCAGGGAGATaGCCCCCAAGGCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: EGRSWRRNPSPLLKVFPRRTPGR*PPRHFP
Trigger: TGGAAAATGCCTTGGGGGCCATCTCCCTGGAGTTCG...CCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAGTACGTGGGAATCTTTGGGGTTGAACTCCAACGTCACGAGTGGAGACGATGGTCTGGAGGGCGTAGATaGGGCCATGATGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: EYVGIFGVELQRHEWRRWSGGRR*GHDGPG
Trigger: TCCCGGGCCATCATGGCCCCATCTACGCCCTCCAGA...CCATCGTCTCCACTCGTGACGTTGGAGTTCAACCCCAAAGATTCCCACGTACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CCA 90 bp CCTGGCCTCCAGGATCTTCTCTCGCCGGGTCTCACGCTCAAACATGGAAGAGGCTTCTTCTCATTCCTCTaGAGGGTAGAGAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PGLQDLLSPGLTLKHGRGFFSFL*RVESPG
Trigger: GCCTGGGCTCTCTACCCTCCAGAGGAATGAGAAGAA...GCCTCTTCCATGTTTGAGCGTGAGACCCGGCGAGAGAAGATCCTGGAGGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CCA 90 bp CCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGCCCTCCTCCACCACCTaGTCTTCTTCTGGACTTGGT +
Preference number: 4 (lower is better)
Translates to: PVPSHILGGSCRGNVSKWPSSTT*SSSGLG
Trigger: ACCAAGTCCAGAAGAAGACCAGGTGGTGGAGGAGGG...CCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGCCCTCCTCCACCACCTaGTCTTCTTCTGGACTTGGT +
Preference number: 4 (lower is better)
Translates to: GGSCRGNVSKWSGSCLERPSSTT*SSSGLG
Trigger: ACCAAGTCCAGAAGAAGACCAGGTGGTGGAGGAGGG...CCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATCCCTCCTCCACCACCTaGTCTTCTTCTGGACTTGGT +
Preference number: 4 (lower is better)
Translates to: RPSPPTYLEAPVVAMCPNPSSTT*SSSGLG
Trigger: ACCAAGTCCAGAAGAAGACCAGGTGGTGGAGGAGGG...ATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp ATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGCCCTGCCAGAGGAGGGTCGATCATaGAGGAGAAACCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: IMEEKPFPTPEGLPEALPEEGRS*RRNPSP
Trigger: TGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTC...TGGCAGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGGAGGAGGGTCGATCATaGAGGAGAAACCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: EGRSWRRNPSPLLKVFPREEGRS*RRNPSP
Trigger: TGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTC...CCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGGAGGAGGGTCGATCATaGAGGAGAAACCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: EEGRSWRRNPSPLLKVFPEEGRS*RRNPSP
Trigger: TGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTC...CGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGGTCAGGGAGCTGCCTaGAAAGGTATTTTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: AEQPSSSRPSPPTYLEAPGQGAA*KGIFKV
Trigger: CACTTTGAAAATACCTTTCCAGGCAGCTCCCTGACC...AGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCCCTCCCACATACTTaGAGGCTCCTGTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: DNRKHSGAAEQPSSSRPSPLPHT*RLLSWQ
Trigger: TTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGG...GGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGGCAGGAAGCAAGGGGTaGTGGGGAGATCCTAGGAAT +
Preference number: 4 (lower is better)
Translates to: EEGRSWRRNPSPLLKVFPAGSKG*WGDPRN
Trigger: ATTCCTAGGATCTCCCCACCACCCCTTGCTTCCTGC...CGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
CDS-3UTR CCA 90 bp AGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCACCTGGTCTTCTTCTaGACTTGGTTGCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RTAKLVPPVPSHILGGSCHLVFF*TWLLPS
Trigger: AGAAGGCAGCAACCAAGTCCAGAAGAAGACCAGGTG...ACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CAA 72 bp CACACAATCTTTTCAGCTGACGTCTTGGCCTTGCGGTaGCAGGAGATGACGATGCCCTGCTCGGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: HTIFSADVLALR*QEMTMPCSVPT
Trigger: GGTGGGGACCGAGCAGGGCATCGTCATCTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAAAGATTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579055.5
3UTR CAA 72 bp CCCGGGAAGGTGCACACAATCTTTTCAGCTGACGTCTaGGCCTTGCGGTTGCAGGAGATGACGATGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PGKVHTIFSADV*ALRLQEMTMPC
Trigger: GCAGGGCATCGTCATCTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAAAGATTGTGTGCACCTTCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR TCA 90 bp TCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAATTGATGGTTTTAGCTaGAGGGTCCTCCTCCATCAC +
Preference number: 4 (lower is better)
Translates to: SRPSPPTYLEAPVVAMCPIDGFS*RVLLHH
Trigger: GTGATGGAGGAGGACCCTTCAGCTAAAACCATCAAT...TGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTCAGGTCCCAGATGTATaGATCGCTGCTCATGCCCAC +
Preference number: 4 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGQVPDV*IAAHAH
Trigger: GTGGGCATGAGCAGCGATTCATACATCTGGGACCTG...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp CCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGCAGGTCCCAGATGTATaGATCGCTGCTCATGCCCAC +
Preference number: 4 (lower is better)
Translates to: PLPHTWRLLSWQCVQMVRQVPDV*IAAHAH
Trigger: GTGGGCATGAGCAGCGATTCATACATCTGGGACCTG...CCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp AGTTCTTCGGGTAGAAGGGGTTTCTCTGGAGGGCGTAGATGGGGCCATGATGGCCAGGTCCCAGATGTATaGATCGCTGCTCATGCCCAC +
Preference number: 4 (lower is better)
Translates to: SSSGRRGFSGGRRWGHDGQVPDV*IAAHAH
Trigger: GTGGGCATGAGCAGCGATTCATACATCTGGGACCTG...GCCATCATGGCCCCATCTACGCCCTCCAGAGAAACCCCTTCTACCCGAAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR TCA 90 bp GGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGGGAATCTTTGGGGTTaGACTCCAACGTCACGAGTG +
Preference number: 4 (lower is better)
Translates to: GGSIMEEKPFPTPEGLPEGNLWG*TPTSRV
Trigger: CACTCGTGACGTTGGAGTTCAACCCCAAAGATTCCC...CTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTGGTACTTGGTCCACATaGTGGACGATTCCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: GRGGSIMEEKPFPTPEGLGTWST*WTIPGC
Trigger: ACAGCCGGGAATCGTCCATCATGTGGACCAAGTACC...AAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCGCACTGCTCGAACATaGAGTCCCAGATATCCAGGG +
Preference number: 4 (lower is better)
Translates to: GRGGSIMEEKPFPTPEGLRTART*SPRYPG
Trigger: CCCTGGATATCTGGGACTTCATGTTCGAGCAGTGCG...AAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp CTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCACACACCTTCAAGCTaGGGGTGGGATCGCACTGCT +
Preference number: 4 (lower is better)
Translates to: LPHTWRLLSWQCVQMVREHTPSS*GWDRTA
Trigger: AGCAGTGCGATCCCACCCTCAGCTTGAAGGTGTGTG...CTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
CDS-3UTR TCA 90 bp TTCGAACTCCAGGGAGATGGCCCCCAAGGCATTTTCCAACTGTTCCTTCTTGGTGGGAGCCGCAGGCGATaGGACACCCATTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FELQGDGPQGIFQLFLLGGSRRR*DTHCPA
Trigger: TGCAGGACAATGGGTGTCTCATCGCCTGCGGCTCCC...ACCAAGAAGGAACAGTTGGAAAATGCCTTGGGGGCCATCTCCCTGGAGTTCGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR TCA 90 bp CCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGTCTGGACTTGGTTGCTaGGGCACTGGCGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: PLPHTWRLLSWQCVQMVRSGLGC*GTGVSF
Trigger: AAAGCTGACGCCAGTGCCTCAGCAACCAAGTCCAGA...CCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTTCTGGACTTGGTTGCTaGGGCACTGGCGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGSGLGC*GTGVSF
Trigger: AAAGCTGACGCCAGTGCCTCAGCAACCAAGTCCAGA...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp CGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCCCATGCAAGTCTGGTTaGGGGTCAAGAGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: RGGSIMEEKPFPTPEGLPPCKSG*GSRGGK
Trigger: TTTCCCACCTCTTGACCCTCAACCAGACTTGCATGG...GGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAACTCCATGGTGCCGGCTaGCTGGGTCCGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: DFLFLICRWTRRVDHGGELHGAG*LGPLLL
Trigger: CAGAAGGAGCGGACCCAGGCAGCCGGCACCATGGAG...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311014.11
ENST00000579055.5
CDS-3UTR GCA 90 bp CCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGGGCGGTCCGAGAAATTaGACTGCTTCCCGAACTCGC +
Preference number: 4 (lower is better)
Translates to: PHTWRLLSWQCVQMVRELGGPRN*TASRTR
Trigger: GCGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCC...CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTTTCCGCTCCACGAACTaGTCGGCCAGCTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: APVVAMCPNGQGAAWKGIFRSTN*SASSGL
Trigger: CAACCCTGAGCTGGCCGAGCAGTTCGTGGAGCGGAA...AATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTCTGTTGCCATCGGGGTaGCAGGAGAGGTGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: APVVAMCPNGQGAAWKGILLPSG*QERCVA
Trigger: TGCCACACACCTCTCCTGGCACCCCGATGGCAACAG...AATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCAGATGTATGAATCGCTaGTCATGCCCACAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: RGGSIMEEKPFPTPEGLPRCMNR*SCPQVP
Trigger: GGGCACCTGTGGGCATGAGCAGCGATTCATACATCT...GGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp ATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGCCCTGCCAAGATGTATGAATCGCTaGTCATGCCCACAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: IMEEKPFPTPEGLPEALPRCMNR*SCPQVP
Trigger: GGGCACCTGTGGGCATGAGCAGCGATTCATACATCT...TGGCAGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp AGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTAGTGCCCGTCTTCGACTaGAGCCAGATGGTGCCATAC +
Preference number: 4 (lower is better)
Translates to: RLLSWQCVQMVRELPGKVVPVFD*SQMVPY
Trigger: GTATGGCACCATCTGGCTGCAGTCGAAGACGGGCAC...TACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp AACCGTCAGGAAGTTCTTCGGGTAGAAGGGGTTTCTCTGGAGGGCGTAGATGGGGTGCCCGTCTTCGACTaGAGCCAGATGGTGCCATAC +
Preference number: 4 (lower is better)
Translates to: NRQEVLRVEGVSLEGVDGVPVFD*SQMVPY
Trigger: GTATGGCACCATCTGGCTGCAGTCGAAGACGGGCAC...CCCATCTACGCCCTCCAGAGAAACCCCTTCTACCCGAAGAACTTCCTGACGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp ATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGCCCTGCCAGATGGCCCGGGAAGGTaGACACAATCTTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: IMEEKPFPTPEGLPEALPDGPGR*TQSFQL
Trigger: CAGCTGAAAAGATTGTGTGCACCTTCCCGGGCCATC...TGGCAGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGATGGCCCGGGAAGGTaGACACAATCTTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GGSIMEEKPFPTPEGLPEDGPGR*TQSFQL
Trigger: CAGCTGAAAAGATTGTGTGCACCTTCCCGGGCCATC...CTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGATGGCCCGGGAAGGTaGACACAATCTTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGGSIMEEKPFPTPEGLPDGPGR*TQSFQL
Trigger: CAGCTGAAAAGATTGTGTGCACCTTCCCGGGCCATC...GGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp AGAAGCACTCGGTGCCCGTCTTCGACTGCAGCCAGATGGTGCCATACACAGGGTTGTCTTCAGACCAAATaGGGGCTGTCCAGTCGCCAA +
Preference number: 4 (lower is better)
Translates to: RSTRCPSSTAARWCHTQGCLQTK*GLSSRQ
Trigger: TTGGCGACTGGACAGCCCGCATTTGGTCTGAAGACA...ACCCTGTGTATGGCACCATCTGGCTGCAGTCGAAGACGGGCACCGAGTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp CCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGTCTGCTCCTCATCCCTaGCCTCCGCCTTACCCTTCT +
Preference number: 4 (lower is better)
Translates to: PHTWRLLSWQCVQMVRELSAPHP*PPPYPS
Trigger: AGAAGGGTAAGGCGGAGGGCAGGGATGAGGAGCAGA...CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGTCTGCTCCTCATCCCTaGCCTCCGCCTTACCCTTCT +
Preference number: 4 (lower is better)
Translates to: LPHTWRLLSWQCVQMVRESAPHP*PPPYPS
Trigger: AGAAGGGTAAGGCGGAGGGCAGGGATGAGGAGCAGA...CTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGTATCTCCACAGGTCCTaGCAGGACAGCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PLPHTWRLLSWQCVQMVRYLHRS*QDSSRF
Trigger: GAACCTGGAGCTGTCCTGGCAGGACCTGTGGAGATA...CCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
CDS-3UTR CCA 90 bp GAGTACGTGGGAATCTTTGGGGTTGAACTCCAACGTCACGAGTGGAGACGATGGCGTACACAATCTCCATaGTGCCGGCTGCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: EYVGIFGVELQRHEWRRWRTQSP*CRLPGS
Trigger: GGACCCAGGCAGCCGGCACCATGGAGATTGTGTACG...CCATCGTCTCCACTCGTGACGTTGGAGTTCAACCCCAAAGATTCCCACGTACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CCA 90 bp ATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGCCCTGCCACACGAGTGGAGACGATaGCTTCAGAGCAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: IMEEKPFPTPEGLPEALPHEWRR*LQSKFR
Trigger: CCTGAACTTGCTCTGAAGCCATCGTCTCCACTCGTG...TGGCAGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTCTCCAACGTCACGAGTaGAGACGATGGCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGLQRHE*RRWLQS
Trigger: GCTCTGAAGCCATCGTCTCCACTCGTGACGTTGGAG...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGCCACCCAGGAGTACGTaGGAATCTTTGGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: GGSCRGNVSKWSGSCLERPPRST*ESLGLN
Trigger: GTTCAACCCCAAAGATTCCCACGTACTCCTGGGTGG...CCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCGAACTCCAGGGAGATaGCCCCCAAGGCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: DNRKHSGAAEQPSSSRPSRTPGR*PPRHFP
Trigger: TGGAAAATGCCTTGGGGGCCATCTCCCTGGAGTTCG...GGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTTTCAGCTGACGTCTTaGCCTTGCGGTTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PVPSHILGGSCRGNVSKWFQLTS*PCGCRR
Trigger: TCTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAA...CCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp AGAAGCACTCGGTGCCCGTCTTCGACTGCAGCCAGATGGTGCCATACACAGGGTTTTCAGCTGACGTCTTaGCCTTGCGGTTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RSTRCPSSTAARWCHTQGFQLTS*PCGCRR
Trigger: TCTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAA...ACCCTGTGTATGGCACCATCTGGCTGCAGTCGAAGACGGGCACCGAGTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CCA 90 bp ATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGCCCTGCCACTGGCGTCAGCTTTATaGCGTCTGCCTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IMEEKPFPTPEGLPEALPLASAL*RLPPSS
Trigger: AGAAGAAGGAGGCAGACGCCATAAAGCTGACGCCAG...TGGCAGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCCTGCCATGGCCATGCAAGTCTGGTTGAGGGTCAAGAGGTGGGAAAGGAAGGCCTGGCGTCAGCTTTATaGCGTCTGCCTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PCHGHASLVEGQEVGKEGLASAL*RLPPSS
Trigger: AGAAGAAGGAGGCAGACGCCATAAAGCTGACGCCAG...GCCTTCCTTTCCCACCTCTTGACCCTCAACCAGACTTGCATGGCCATGGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCCTGCCATGGCCATGCAAGTCTGGTTGAGGGTCAAGAGGTGGGAAAGGAAGGCATGGCCATGCAAGTCTaGTTGAGGGTCAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PCHGHASLVEGQEVGKEGMAMQV*LRVKRW
Trigger: CCACCTCTTGACCCTCAACCAGACTTGCATGGCCAT...GCCTTCCTTTCCCACCTCTTGACCCTCAACCAGACTTGCATGGCCATGGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGATGGCCATGCAAGTCTaGTTGAGGGTCAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GGSCRGNVSKWSGSCLERMAMQV*LRVKRW
Trigger: CCACCTCTTGACCCTCAACCAGACTTGCATGGCCAT...CCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACGGTCAGGGAGCTGCCTaGAAAGGTATTTTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHGQGAA*KGIFKV
Trigger: CACTTTGAAAATACCTTTCCAGGCAGCTCCCTGACC...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAGGTCAGGGAGCTGCCTaGAAAGGTATTTTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: PARPLPHTWRLLSWQCVQGQGAA*KGIFKV
Trigger: CACTTTGAAAATACCTTTCCAGGCAGCTCCCTGACC...TTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGGGCAATGTGTCCAAATaGTCAGGGAGCTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: EEGRSWRRNPSPLLKVFPGNVSK*SGSCLE
Trigger: TTCCAGGCAGCTCCCTGACCATTTGGACACATTGCC...CGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGGGCAATGTGTCCAAATaGTCAGGGAGCTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: EGRSWRRNPSPLLKVFPRGNVSK*SGSCLE
Trigger: TTCCAGGCAGCTCCCTGACCATTTGGACACATTGCC...CCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGTGGAGGCTCCTGTCGTaGCAATGTGTCCAAATGGTC +
Preference number: 4 (lower is better)
Translates to: EGRSWRRNPSPLLKVFPRWRLLS*QCVQMV
Trigger: GACCATTTGGACACATTGCCACGACAGGAGCCTCCA...CCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTGGAGGCTCCTGTCGTaGCAATGTGTCCAAATGGTC +
Preference number: 4 (lower is better)
Translates to: GGSCRGNVSKWSGSCLERWRLLS*QCVQMV
Trigger: GACCATTTGGACACATTGCCACGACAGGAGCCTCCA...CCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGAAGCAAGGGGTGGTaGGGAGATCCTAGGAATTTG +
Preference number: 4 (lower is better)
Translates to: RPSPPTYLEAPVVAMCPNGSKGW*GDPRNL
Trigger: CAAATTCCTAGGATCTCCCCACCACCCCTTGCTTCC...ATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
CDS-3UTR CCA 90 bp GGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGGGAAGCAAGGGGTGGTaGGGAGATCCTAGGAATTTG +
Preference number: 4 (lower is better)
Translates to: GGSCRGNVSKWSGSCLERGSKGW*GDPRNL
Trigger: CAAATTCCTAGGATCTCCCCACCACCCCTTGCTTCC...CCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
CDS-3UTR CCA 90 bp GGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTGGTTCTCAATCTGGTTaGGGCAGGAAGCAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GRGGSIMEEKPFPTPEGLGSQSG*GRKQGV
Trigger: CACCCCTTGCTTCCTGCCCCAACCAGATTGAGAACC...AAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
CDS-3UTR CCA 90 bp ATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGCCCTGCCATCCAGGTTCTCAATCTaGTTGGGGCAGGAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: IMEEKPFPTPEGLPEALPSRFSI*LGQEAR
Trigger: CCTTGCTTCCTGCCCCAACCAGATTGAGAACCTGGA...TGGCAGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
CDS-3UTR CCA 90 bp CGGGTCTCACGCTCAAACATGGAAGAGGCTACGTTCTTCTCATTCCTCTGGAGGGCCCTCTTGATTTCCTaGGGGTCCAGAGCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: RVSRSNMEEATFFSFLWRALLIS*GSRAEL
Trigger: CAGCTCGGCTCTGGACCCCCAGGAAATCAAGAGGGC...CCTCCAGAGGAATGAGAAGAACGTAGCCTCTTCCATGTTTGAGCGTGAGACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR TCA 90 bp GAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGACTCGCTGCGCTTCTTaGCGTACACGTACACAATCT +
Preference number: 4 (lower is better)
Translates to: EGRSWRRNPSPLLKVFPRTRCAS*RTRTQS
Trigger: AGATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGT...CCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTGGGAATCTTTGGGGTTaGACTCCAACGTCACGAGTG +
Preference number: 4 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGGNLWG*TPTSRV
Trigger: CACTCGTGACGTTGGAGTTCAACCCCAAAGATTCCC...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTACTGTTCCTTCTTGGTaGTGTCCAAGATCACAACTT +
Preference number: 4 (lower is better)
Translates to: AEQPSSSRPSPPTYLEAPTVPSW*CPRSQL
Trigger: AAGTTGTGATCTTGGACATCACCAAGAAGGAACAGT...AGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp AGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTAGGTACTTGGTCCACATaGTGGACGATTCCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: RLLSWQCVQMVRELPGKVGTWST*WTIPGC
Trigger: ACAGCCGGGAATCGTCCATCATGTGGACCAAGTACC...TACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp ATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCGGTACTTGGTCCACATaGTGGACGATTCCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: ICRWTRRVDHGGETLPHSGTWST*WTIPGC
Trigger: ACAGCCGGGAATCGTCCATCATGTGGACCAAGTACC...GGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp AGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTACGCACTGCTCGAACATaGAGTCCCAGATATCCAGGG +
Preference number: 4 (lower is better)
Translates to: RLLSWQCVQMVRELPGKVRTART*SPRYPG
Trigger: CCCTGGATATCTGGGACTTCATGTTCGAGCAGTGCG...TACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCATGCAAGTCTGGTTaGGGGTCAAGAGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: DNRKHSGAAEQPSSSRPSPCKSG*GSRGGK
Trigger: TTTCCCACCTCTTGACCCTCAACCAGACTTGCATGG...GGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CCAGGCAGCATCAGTGAGGTAAGCCATGTGGTACTTGGTCCACATGATGGACGATGGGTCCGCTCCTTCTaGTTCTGGGTCTCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: PGSISEVSHVVLGPHDGRWVRSF*FWVSGE
Trigger: TTCCCCAGAGACCCAGAAGCAGAAGGAGCGGACCCA...TCGTCCATCATGTGGACCAAGTACCACATGGCTTACCTCACTGATGCTGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp GCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTGGCGGTCCGAGAAATTaGACTGCTTCCCGAACTCGC +
Preference number: 4 (lower is better)
Translates to: APVVAMCPNGQGAAWKGIGGPRN*TASRTR
Trigger: GCGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCC...AATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp ATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGGAAACGGATGGTCTaGTCCAGCTCCAGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: IRITESIQVQQNSQARPARKRMV*SSSRGF
Trigger: GAACCCCCTGGAGCTGGAGCAGACCATCCGTTTCCG...GGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCTTCTGCTTGATGCAGTaGTCCATGATAGAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: RGGSIMEEKPFPTPEGLPFCLMQ*SMIEPS
Trigger: GCTCGGCTCTATCATGGAGCACTGCATCAAGCAGAA...GGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CCCTGCCATGGCCATGCAAGTCTGGTTGAGGGTCAAGAGGTGGGAAAGGAAGGCTTCTGCTTGATGCAGTaGTCCATGATAGAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: PCHGHASLVEGQEVGKEGFCLMQ*SMIEPS
Trigger: GCTCGGCTCTATCATGGAGCACTGCATCAAGCAGAA...GCCTTCCTTTCCCACCTCTTGACCCTCAACCAGACTTGCATGGCCATGGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGTTCTGCTTGATGCAGTaGTCCATGATAGAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: GGSIMEEKPFPTPEGLPEFCLMQ*SMIEPS
Trigger: GCTCGGCTCTATCATGGAGCACTGCATCAAGCAGAA...CTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp ATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCTGTTGCCATCGGGGTaGCAGGAGAGGTGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: IRITESIQVQQNSQARPALLPSG*QERCVA
Trigger: TGCCACACACCTCTCCTGGCACCCCGATGGCAACAG...GGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp ACAATCTTTTCAGCTGACGTCTTGGCCTTGCGGTTGCAGGAGATGACGATGCCCCTGCCAACTTCCTGTTaGCATCGGGGTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: TIFSADVLALRLQEMTMPLPTSC*HRGARR
Trigger: TCTCCTGGCACCCCGATGGCAACAGGAAGTTGGCAG...GGGCATCGTCATCTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAAAGATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp ATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCGCTCATGCCCACAGGTaGCCGCTGAAAATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: ICRWTRRVDHGGETLPHSAHAHR*PLKIQA
Trigger: TGCTTGGATTTTCAGCGGGCACCTGTGGGCATGAGC...GGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTCATGCCCACAGGTaGCCGCTGAAAATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: PPTYLEAPVVAMCPNGQGAHAHR*PLKIQA
Trigger: TGCTTGGATTTTCAGCGGGCACCTGTGGGCATGAGC...TCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTTGTCTTCAGACCAAATaGGGGCTGTCCAGTCGCCAA +
Preference number: 4 (lower is better)
Translates to: GRGGSIMEEKPFPTPEGLCLQTK*GLSSRQ
Trigger: TTGGCGACTGGACAGCCCGCATTTGGTCTGAAGACA...AAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATAGGGTGGGATCGCACTaGTCGAACATGAAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GSCRGNVSKWSGSCLERYRVGSH*SNMKSQ
Trigger: CTGGGACTTCATGTTCGAGCAGTGCGATCCCACCCT...ATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCCAGCTTTATGGCGTCTaGCTCCTTCTTCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: RGGSIMEEKPFPTPEGLPQLYGV*LLLLQL
Trigger: GAGCTGAAGAAGAAGGAGGCAGACGCCATAAAGCTG...GGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGCAGCTTTATGGCGTCTaGCTCCTTCTTCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: PVPSHILGGSCRGNVSKWQLYGV*LLLLQL
Trigger: GAGCTGAAGAAGAAGGAGGCAGACGCCATAAAGCTG...CCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp TTCGAACTCCAGGGAGATGGCCCCCAAGGCATTTTCCAACTGTTCCTTCTTGGTGTCTTCCCGAGGCCCTaGCATGGCCATGCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: FELQGDGPQGIFQLFLLGVFPRP*HGHASL
Trigger: CAGACTTGCATGGCCATGGCAGGGCCTCGGGAAGAC...ACCAAGAAGGAACAGTTGGAAAATGCCTTGGGGGCCATCTCCCTGGAGTTCGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp GATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCTCTGGACTTGGTTGCTaGCTTCTCCTTCAGCCGCAT +
Preference number: 4 (lower is better)
Translates to: DNRKHSGAAEQPSSSRPSSGLGC*LLLQPH
Trigger: ATGCGGCTGAAGGAGAAGGCAGCAACCAAGTCCAGA...GGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CCA 90 bp CCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAATGTTCAGCTCGGCCTaGCGGTCCGAGAAATTGCAC +
Preference number: 4 (lower is better)
Translates to: PPTYLEAPVVAMCPNGQGMFSSA*RSEKLH
Trigger: GTGCAATTTCTCGGACCGCCAGGCCGAGCTGAACAT...TCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCAGGGTCTCGGTGGCTaGACTCAATGGTGGATAGCT +
Preference number: 4 (lower is better)
Translates to: PHTWRLLSWQCVQMVRELQGLGG*TQWWIA
Trigger: AGCTATCCACCATTGAGTCCAGCCACCGAGACCCTG...CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGACAGGGTCTCGGTGGCTaGACTCAATGGTGGATAGCT +
Preference number: 4 (lower is better)
Translates to: PPTYLEAPVVAMCPNGQGQGLGG*TQWWIA
Trigger: AGCTATCCACCATTGAGTCCAGCCACCGAGACCCTG...TCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTTACACAGGGTCTCGGTaGCTGGACTCAATGGTGGAT +
Preference number: 4 (lower is better)
Translates to: GRGGSIMEEKPFPTPEGLYTGSR*LDSMVD
Trigger: ATCCACCATTGAGTCCAGCCACCGAGACCCTGTGTA...AAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp AGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATCGACTGCAGCCAGATaGTGCCATACACAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: RLLSWQCVQMVRELPGKVSTAAR*CHTQGL
Trigger: GAGACCCTGTGTATGGCACCATCTGGCTGCAGTCGA...TACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAATCTGGAGGGCGTAGATaGGGCCATGATGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: DFLFLICRWTRRVDHGGESGGRR*GHDGPG
Trigger: TCCCGGGCCATCATGGCCCCATCTACGCCCTCCAGA...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCGTCTTCTTCTGGACTTaGTTGCTGAGGCACTGGCGT +
Preference number: 4 (lower is better)
Translates to: DNRKHSGAAEQPSSSRPSVFFWT*LLRHWR
Trigger: ACGCCAGTGCCTCAGCAACCAAGTCCAGAAGAAGAC...GGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTATGGCCATGCAAGTCTaGTTGAGGGTCAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRGGSIMEEKPFPTPEGLMAMQV*LRVKRW
Trigger: CCACCTCTTGACCCTCAACCAGACTTGCATGGCCAT...AAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGGAGGAGGGTCGATCATaGAGGAGAAACCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LPHTWRLLSWQCVQMVREEEGRS*RRNPSP
Trigger: TGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTC...CTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTTCCAGGTTCTCAATCTaGTTGGGGCAGGAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGSRFSI*LGQEAR
Trigger: CCTTGCTTCCTGCCCCAACCAGATTGAGAACCTGGA...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
3UTR CAA 72 bp AAGGTGCACACAATCTTTTCAGCTGACGTCTTGGCCTaGCGGTTGCAGGAGATGACGATGCCCTGCTCGGTC +
Preference number: 4 (lower is better)
Translates to: KVHTIFSADVLA*RLQEMTMPCSV
Trigger: GACCGAGCAGGGCATCGTCATCTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAAAGATTGTGTGCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR TCA 90 bp TCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCATGGCCTCCTCGTCATTaGAATACTCTTCATAGATGT +
Preference number: 4 (lower is better)
Translates to: SRPSPPTYLEAPVVAMCPWPPRH*NTLHRC
Trigger: ACATCTATGAAGAGTATTTCAATGACGAGGAGGCCA...TGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATGGGAATCTTTGGGGTTaGACTCCAACGTCACGAGTG +
Preference number: 4 (lower is better)
Translates to: GSCRGNVSKWSGSCLERYGNLWG*TPTSRV
Trigger: CACTCGTGACGTTGGAGTTCAACCCCAAAGATTCCC...ATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTCACAATCTTTTCAGCTaGCGTCTTGGCCTTGCGGTT +
Preference number: 4 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGHNLFS*RLGLAV
Trigger: AACCGCAAGGCCAAGACGTCAGCTGAAAAGATTGTG...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp CCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCATGCAAGTCTGGTTaGGGGTCAAGAGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: PHTWRLLSWQCVQMVRELPCKSG*GSRGGK
Trigger: TTTCCCACCTCTTGACCCTCAACCAGACTTGCATGG...CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAAGGGAGCCGCAGGCGATaGGACACCCATTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: DFLFLICRWTRRVDHGGEGSRRR*DTHCPS
Trigger: TGAAGGACAATGGGTGTCTCATCGCCTGCGGCTCCC...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582036.5
CDS-3UTR GCA 90 bp GCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTTCCGAGAAATTGCACTaGTTCCCGAACTCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: APVVAMCPNGQGAAWKGISEKLH*FPNSLR
Trigger: GCGCAGCGAGTTCGGGAAGCAGTGCAATTTCTCGGA...AATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp AGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTAGCAGGAGTATGCCACTaGCAACTTCCTGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: RLLSWQCVQMVRELPGKVAGVCH*QLPVAI
Trigger: GATGGCAACAGGAAGTTGGCAGTGGCATACTCCTGC...TACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGGCAGGAGTATGCCACTaGCAACTTCCTGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: LPHTWRLLSWQCVQMVREAGVCH*QLPVAI
Trigger: GATGGCAACAGGAAGTTGGCAGTGGCATACTCCTGC...CTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CCCTGCCATGGCCATGCAAGTCTGGTTGAGGGTCAAGAGGTGGGAAAGGAAGGCATCCAAGCAGGAGTATaGCACTGCCAACTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: PCHGHASLVEGQEVGKEGIQAGV*HCQLPV
Trigger: AACAGGAAGTTGGCAGTGGCATACTCCTGCTTGGAT...GCCTTCCTTTCCCACCTCTTGACCCTCAACCAGACTTGCATGGCCATGGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCATCCAAGCAGGAGTATaGCACTGCCAACTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: RGGSIMEEKPFPTPEGLPIQAGV*HCQLPV
Trigger: AACAGGAAGTTGGCAGTGGCATACTCCTGCTTGGAT...GGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp ATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCGATGGCCCGGGAAGGTaGACACAATCTTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: ICRWTRRVDHGGETLPHSDGPGR*TQSFQL
Trigger: CAGCTGAAAAGATTGTGTGCACCTTCCCGGGCCATC...GGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGGATGGCCCGGGAAGGTaGACACAATCTTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LPHTWRLLSWQCVQMVREDGPGR*TQSFQL
Trigger: CAGCTGAAAAGATTGTGTGCACCTTCCCGGGCCATC...CTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGTGTCTTCAGACCAAATaGGGGCTGTCCAGTCGCCAA +
Preference number: 4 (lower is better)
Translates to: LPHTWRLLSWQCVQMVRECLQTK*GLSSRQ
Trigger: TTGGCGACTGGACAGCCCGCATTTGGTCTGAAGACA...CTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp ATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCAGACACCCATTGTCCTaGACCCGGAGGCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: IRITESIQVQQNSQARPARHPLS*TRRQKR
Trigger: CCTCTTCTGCCTCCGGGTGCAGGACAATGGGTGTCT...GGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
CDS-3UTR GCA 90 bp TCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAAATGGTCAGGGAGCTaGCTGGAAAGGTATTTTCAA +
Preference number: 4 (lower is better)
Translates to: SRPSPPTYLEAPVVAMCPKWSGS*LERYFQ
Trigger: TTGAAAATACCTTTCCAGGCAGCTCCCTGACCATTT...TGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GCCCCCAAGGCATTTTCCAACTGTTCCTTCTTGGTGATGTCCAAGATCACAACTATGGTGCCGGCTGCCTaGGTCCGCTCCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: APKAFSNCSFLVMSKITTMVPAA*VRSFCF
Trigger: GAAGCAGAAGGAGCGGACCCAGGCAGCCGGCACCAT...AGTTGTGATCTTGGACATCACCAAGAAGGAACAGTTGGAAAATGCCTTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CCA 90 bp ACAATCTTTTCAGCTGACGTCTTGGCCTTGCGGTTGCAGGAGATGACGATGCCCATGTTCAGCTCGGCCTaGCGGTCCGAGAAATTGCAC +
Preference number: 4 (lower is better)
Translates to: TIFSADVLALRLQEMTMPMFSSA*RSEKLH
Trigger: GTGCAATTTCTCGGACCGCCAGGCCGAGCTGAACAT...GGGCATCGTCATCTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAAAGATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CCA 90 bp CCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGGCCCTCTTGATTTCCTaGGGGTCCCTGAACACATTG +
Preference number: 4 (lower is better)
Translates to: PHTWRLLSWQCVQMVRELALLIS*GSLNTL
Trigger: CAATGTGTTCAGGGACCCCCAGGAAATCAAGAGGGC...CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCACGAGTGGAGACGATaGCTTCAGAGCAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PHTWRLLSWQCVQMVRELHEWRR*LQSKFR
Trigger: CCTGAACTTGCTCTGAAGCCATCGTCTCCACTCGTG...CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCACGAGTGGAGACGATaGCTTCAGAGCAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LPHTWRLLSWQCVQMVREHEWRR*LQSKFR
Trigger: CCTGAACTTGCTCTGAAGCCATCGTCTCCACTCGTG...CTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTCAGGGTCTCGGTGGCTaGACTCAATGGTGGATAGCT +
Preference number: 4 (lower is better)
Translates to: APVVAMCPNGQGAAWKGIQGLGG*TQWWIA
Trigger: AGCTATCCACCATTGAGTCCAGCCACCGAGACCCTG...AATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp ATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTACACAGGGTCTCGGTaGCTGGACTCAATGGTGGAT +
Preference number: 4 (lower is better)
Translates to: ICRWTRRVDHGGETLPHSYTGSR*LDSMVD
Trigger: ATCCACCATTGAGTCCAGCCACCGAGACCCTGTGTA...GGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp AGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATACACAGGGTCTCGGTaGCTGGACTCAATGGTGGAT +
Preference number: 4 (lower is better)
Translates to: RLLSWQCVQMVRELPGKVYTGSR*LDSMVD
Trigger: ATCCACCATTGAGTCCAGCCACCGAGACCCTGTGTA...TACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCAGGCAGCATCAGTGAGGTAAGCCATGTGGTACTTGGTCCACATGATGGACGATCGACTGCAGCCAGATaGTGCCATACACAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PGSISEVSHVVLGPHDGRSTAAR*CHTQGL
Trigger: GAGACCCTGTGTATGGCACCATCTGGCTGCAGTCGA...TCGTCCATCATGTGGACCAAGTACCACATGGCTTACCTCACTGATGCTGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CCA 90 bp GGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGAGATCACAACTTCAGTaGGCTCGCTCATCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: GGSIMEEKPFPTPEGLPERSQLQ*ARSSFG
Trigger: TCCGAAAGATGAGCGAGCCCACTGAAGTTGTGATCT...CTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTTCTTCTCATTCCTCTaGAGGGTAGAGAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GSCRGNVSKWSGSCLERYFFSFL*RVESPG
Trigger: GCCTGGGCTCTCTACCCTCCAGAGGAATGAGAAGAA...ATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGATTCTTCTCATTCCTCTaGAGGGTAGAGAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PPTYLEAPVVAMCPNGQGFFSFL*RVESPG
Trigger: GCCTGGGCTCTCTACCCTCCAGAGGAATGAGAAGAA...TCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATATGGCCATGCAAGTCTaGTTGAGGGTCAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GSCRGNVSKWSGSCLERYMAMQV*LRVKRW
Trigger: CCACCTCTTGACCCTCAACCAGACTTGCATGGCCAT...ATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGGGCAATGTGTCCAAATaGTCAGGGAGCTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PHTWRLLSWQCVQMVRELGNVSK*SGSCLE
Trigger: TTCCAGGCAGCTCCCTGACCATTTGGACACATTGCC...CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATACTCGCTGCGCTTCTTaGCGTACACGTACACAATCT +
Preference number: 4 (lower is better)
Translates to: GSCRGNVSKWSGSCLERYTRCAS*RTRTQS
Trigger: AGATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGT...ATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCATTGATGGTTTTAGCTaGAGGGTCCTCCTCCATCAC +
Preference number: 4 (lower is better)
Translates to: DNRKHSGAAEQPSSSRPSIDGFS*RVLLHH
Trigger: GTGATGGAGGAGGACCCTTCAGCTAAAACCATCAAT...GGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GATGTCCAAGATCACAACTTCAGTGGGCTCGCTCATCTTTCGGATGTCCCACCACCCACAGGTGCCCGCTaGAAATCCAAGCAGGAGTAT +
Preference number: 4 (lower is better)
Translates to: DVQDHNFSGLAHLSDVPPPTGAR*KSKQEY
Trigger: ATACTCCTGCTTGGATTTTCAGCGGGCACCTGTGGG...TGGTGGGACATCCGAAAGATGAGCGAGCCCACTGAAGTTGTGATCTTGGACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR TCA 90 bp CCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCACAATCTTTTCAGCTaGCGTCTTGGCCTTGCGGTT +
Preference number: 4 (lower is better)
Translates to: PHTWRLLSWQCVQMVRELHNLFS*RLGLAV
Trigger: AACCGCAAGGCCAAGACGTCAGCTGAAAAGATTGTG...CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAACACACACCTTCAAGCTaGGGGTGGGATCGCACTGCT +
Preference number: 4 (lower is better)
Translates to: DFLFLICRWTRRVDHGGEHTPSS*GWDRTA
Trigger: AGCAGTGCGATCCCACCCTCAGCTTGAAGGTGTGTG...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
CDS-3UTR GCA 90 bp GATGTCCAAGATCACAACTTCAGTGGGCTCGCTCATCTTTCGGATGTCCCACCATCCGAGAAATTGCACTaGTTCCCGAACTCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: DVQDHNFSGLAHLSDVPPSEKLH*FPNSLR
Trigger: GCGCAGCGAGTTCGGGAAGCAGTGCAATTTCTCGGA...TGGTGGGACATCCGAAAGATGAGCGAGCCCACTGAAGTTGTGATCTTGGACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAAGGCGGTCCGAGAAATTaGACTGCTTCCCGAACTCGC +
Preference number: 4 (lower is better)
Translates to: DFLFLICRWTRRVDHGGEGGPRN*TASRTR
Trigger: GCGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCC...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGTCAATGGCATTGTTCTaGTTGATGCAGTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: GGSIMEEKPFPTPEGLPESMALF*LMQCSM
Trigger: CATGGAGCACTGCATCAAGCAGAACAATGCCATTGA...CTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAACTGCCAACTTCCTGTTaGCATCGGGGTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: DFLFLICRWTRRVDHGGELPTSC*HRGARR
Trigger: TCTCCTGGCACCCCGATGGCAACAGGAAGTTGGCAG...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTATCCAAGCAGGAGTATaGCACTGCCAACTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: GRGGSIMEEKPFPTPEGLIQAGV*HCQLPV
Trigger: AACAGGAAGTTGGCAGTGGCATACTCCTGCTTGGAT...AAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTTTCAAACGTACACAATCTCCATaGTGCCGGCTGCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: VVAMCPNGQGAAWKGIFKRTQSP*CRLPGS
Trigger: GGACCCAGGCAGCCGGCACCATGGAGATTGTGTACG...TTTGAAAATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311014.11
ENST00000579055.5
CDS-3UTR CCA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTAGATCACAACTTCAGTaGGCTCGCTCATCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGRSQLQ*ARSSFG
Trigger: TCCGAAAGATGAGCGAGCCCACTGAAGTTGTGATCT...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp CCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCTCACGCTCAAACATaGAAGAGGCTACGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PVPSHILGGSCRGNVSKWSHAQT*KRLRSS
Trigger: AGAAGAACGTAGCCTCTTCCATGTTTGAGCGTGAGA...CCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGTCTCACGCTCAAACATaGAAGAGGCTACGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EEGRSWRRNPSPLLKVFPSHAQT*KRLRSS
Trigger: AGAAGAACGTAGCCTCTTCCATGTTTGAGCGTGAGA...CGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTGTCTTCTTCTGGACTTaGTTGCTGAGGCACTGGCGT +
Preference number: 4 (lower is better)
Translates to: APVVAMCPNGQGAAWKGIVFFWT*LLRHWR
Trigger: ACGCCAGTGCCTCAGCAACCAAGTCCAGAAGAAGAC...AATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTGGTCAGGGAGCTGCCTaGAAAGGTATTTTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: GRGGSIMEEKPFPTPEGLGQGAA*KGIFKV
Trigger: CACTTTGAAAATACCTTTCCAGGCAGCTCCCTGACC...AAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTGGCCTCCTCGTCATTaGAATACTCTTCATAGATGT +
Preference number: 4 (lower is better)
Translates to: GGSCRGNVSKWSGSCLERWPPRH*NTLHRC
Trigger: ACATCTATGAAGAGTATTTCAATGACGAGGAGGCCA...CCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp CCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTGGCCTCCTCGTCATTaGAATACTCTTCATAGATGT +
Preference number: 4 (lower is better)
Translates to: PVPSHILGGSCRGNVSKWWPPRH*NTLHRC
Trigger: ACATCTATGAAGAGTATTTCAATGACGAGGAGGCCA...CCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAACCCACAGGTGCCCGCTaGAAATCCAAGCAGGAGTAT +
Preference number: 4 (lower is better)
Translates to: DFLFLICRWTRRVDHGGEPTGAR*KSKQEY
Trigger: ATACTCCTGCTTGGATTTTCAGCGGGCACCTGTGGG...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTTGCGGTTGCAGGAGATaGCGATGCCCTGCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: TRIRITESIQVQQNSQARCGCRR*RCPARS
Trigger: GGACCGAGCAGGGCATCGTCATCTCCTGCAACCGCA...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTTCAATGGCATTGTTCTaGTTGATGCAGTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGSMALF*LMQCSM
Trigger: CATGGAGCACTGCATCAAGCAGAACAATGCCATTGA...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGTCAATGGCATTGTTCTaGTTGATGCAGTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: PLPHTWRLLSWQCVQMVRSMALF*LMQCSM
Trigger: CATGGAGCACTGCATCAAGCAGAACAATGCCATTGA...CCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGATCCAAGCAGGAGTATaGCACTGCCAACTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LPHTWRLLSWQCVQMVREIQAGV*HCQLPV
Trigger: AACAGGAAGTTGGCAGTGGCATACTCCTGCTTGGAT...CTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTTTCAAAGTGCCCGTCTTCGACTaGAGCCAGATGGTGCCATAC +
Preference number: 4 (lower is better)
Translates to: VVAMCPNGQGAAWKGIFKVPVFD*SQMVPY
Trigger: GTATGGCACCATCTGGCTGCAGTCGAAGACGGGCAC...TTTGAAAATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp TCCTTCTTGGTGATGTCCAAGATCACAACTTCAGTGGGCTCGCTCATCTTTCGGAGGGTGGGATCGCACTaGTCGAACATGAAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SFLVMSKITTSVGSLIFRRVGSH*SNMKSQ
Trigger: CTGGGACTTCATGTTCGAGCAGTGCGATCCCACCCT...CCGAAAGATGAGCGAGCCCACTGAAGTTGTGATCTTGGACATCACCAAGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp GGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGAAATGGTCAGGGAGCTaGCTGGAAAGGTATTTTCAA +
Preference number: 4 (lower is better)
Translates to: GGSCRGNVSKWSGSCLERKWSGS*LERYFQ
Trigger: TTGAAAATACCTTTCCAGGCAGCTCCCTGACCATTT...CCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAACTGCTTCTGGGTCTCTaGGGAAGCGTTCAATCCACG +
Preference number: 4 (lower is better)
Translates to: DFLFLICRWTRRVDHGGELLLGL*GSVQST
Trigger: CGTGGATTGAACGCTTCCCCAGAGACCCAGAAGCAG...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311014.11
ENST00000579055.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTCAAGTTCAGGCTTGTTaGGGTTTTCCAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: APVVAMCPNGQGAAWKGIQVQAC*GFPGPR
Trigger: TCTGGGACCTGGAAAACCCCAACAAGCCTGAACTTG...AATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp TCCATTGTAGCAGCCACCCAGGAGTACGTGGGAATCTTTGGGGTTGAACTCCAACCACCCAGGAGTACGTaGGAATCTTTGGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: SIVAATQEYVGIFGVELQPPRST*ESLGLN
Trigger: GTTCAACCCCAAAGATTCCCACGTACTCCTGGGTGG...TTGGAGTTCAACCCCAAAGATTCCCACGTACTCCTGGGTGGCTGCTACAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CCA 90 bp CCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGAGATCACAACTTCAGTaGGCTCGCTCATCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: PHTWRLLSWQCVQMVRELRSQLQ*ARSSFG
Trigger: TCCGAAAGATGAGCGAGCCCACTGAAGTTGTGATCT...CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp AGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTAAGATCACAACTTCAGTaGGCTCGCTCATCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: RLLSWQCVQMVRELPGKVRSQLQ*ARSSFG
Trigger: TCCGAAAGATGAGCGAGCCCACTGAAGTTGTGATCT...TACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAACGAACTCCAGGGAGATaGCCCCCAAGGCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: DFLFLICRWTRRVDHGGERTPGR*PPRHFP
Trigger: TGGAAAATGCCTTGGGGGCCATCTCCCTGGAGTTCG...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAACCCTCCTCCACCACCTaGTCTTCTTCTGGACTTGGT +
Preference number: 4 (lower is better)
Translates to: DFLFLICRWTRRVDHGGEPSSTT*SSSGLG
Trigger: ACCAAGTCCAGAAGAAGACCAGGTGGTGGAGGAGGG...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp ATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCACTCGCTGCGCTTCTTaGCGTACACGTACACAATCT +
Preference number: 4 (lower is better)
Translates to: IRITESIQVQQNSQARPATRCAS*RTRTQS
Trigger: AGATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGT...GGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTACTGTTCCTTCTTGGTaGTGTCCAAGATCACAACTT +
Preference number: 4 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGTVPSW*CPRSQL
Trigger: AAGTTGTGATCTTGGACATCACCAAGAAGGAACAGT...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp TTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCCACACACCTTCAAGCTaGGGGTGGGATCGCACTGCT +
Preference number: 4 (lower is better)
Translates to: FSKWTDFLFLICRWTRRVHTPSS*GWDRTA
Trigger: AGCAGTGCGATCCCACCCTCAGCTTGAAGGTGTGTG...GACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
CDS-3UTR TCA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAACCATGCAAGTCTGGTTaGGGGTCAAGAGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: DFLFLICRWTRRVDHGGEPCKSG*GSRGGK
Trigger: TTTCCCACCTCTTGACCCTCAACCAGACTTGCATGG...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCTGTTGCCATCGGGGTaGCAGGAGAGGTGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: TRIRITESIQVQQNSQARLLPSG*QERCVA
Trigger: TGCCACACACCTCTCCTGGCACCCCGATGGCAACAG...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp TCCTTCTTGGTGATGTCCAAGATCACAACTTCAGTGGGCTCGCTCATCTTTCGGGCAGGAGTATGCCACTaGCAACTTCCTGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: SFLVMSKITTSVGSLIFRAGVCH*QLPVAI
Trigger: GATGGCAACAGGAAGTTGGCAGTGGCATACTCCTGC...CCGAAAGATGAGCGAGCCCACTGAAGTTGTGATCTTGGACATCACCAAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp GTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTTTCAAAATGAATCGCTGCTCATaGCCACAGGTGCCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: VVAMCPNGQGAAWKGIFKMNRCS*PQVPAE
Trigger: TTCAGCGGGCACCTGTGGGCATGAGCAGCGATTCAT...TTTGAAAATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp TTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCTCCCACCACATGACCTaGCCATCCGTGGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: FSKWTDFLFLICRWTRRVSHHMT*PSVEAE
Trigger: CTCAGCTTCCACGGATGGGCAGGTCATGTGGTGGGA...GACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp AGTTCTTCGGGTAGAAGGGGTTTCTCTGGAGGGCGTAGATGGGGCCATGATGGCAAATGGTCAGGGAGCTaGCTGGAAAGGTATTTTCAA +
Preference number: 4 (lower is better)
Translates to: SSSGRRGFSGGRRWGHDGKWSGS*LERYFQ
Trigger: TTGAAAATACCTTTCCAGGCAGCTCCCTGACCATTT...GCCATCATGGCCCCATCTACGCCCTCCAGAGAAACCCCTTCTACCCGAAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp CCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGAAATGGTCAGGGAGCTaGCTGGAAAGGTATTTTCAA +
Preference number: 4 (lower is better)
Translates to: PLPHTWRLLSWQCVQMVRKWSGS*LERYFQ
Trigger: TTGAAAATACCTTTCCAGGCAGCTCCCTGACCATTT...CCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTTTAGTTATTGCAGTTaGTCTCTGAGGAGGGCAATA +
Preference number: 4 (lower is better)
Translates to: PVPSHILGGSCRGNVSKWFSYCS*SLRRAI
Trigger: TATTGCCCTCCTCAGAGAGCAACTGCAATAACTAAA...CCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
CDS-3UTR CCA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAATTCTTCTCATTCCTCTaGAGGGTAGAGAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: DFLFLICRWTRRVDHGGEFFSFL*RVESPG
Trigger: GCCTGGGCTCTCTACCCTCCAGAGGAATGAGAAGAA...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GCCCCCAAGGCATTTTCCAACTGTTCCTTCTTGGTGATGTCCAAGATCACAACTGAGGAGGGTCGATCATaGAGGAGAAACCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: APKAFSNCSFLVMSKITTEEGRS*RRNPSP
Trigger: TGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTC...AGTTGTGATCTTGGACATCACCAAGAAGGAACAGTTGGAAAATGCCTTGGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CCA 90 bp ACAATCTTTTCAGCTGACGTCTTGGCCTTGCGGTTGCAGGAGATGACGATGCCCGGTCAGGGAGCTGCCTaGAAAGGTATTTTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: TIFSADVLALRLQEMTMPGQGAA*KGIFKV
Trigger: CACTTTGAAAATACCTTTCCAGGCAGCTCCCTGACC...GGGCATCGTCATCTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAAAGATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CCA 90 bp TTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCCCCCTCCCACATACTTaGAGGCTCCTGTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: FSKWTDFLFLICRWTRRVPLPHT*RLLSWQ
Trigger: TTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGG...GACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCGTACACAATCTCCATaGTGCCGGCCTGGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: TRIRITESIQVQQNSQARRTQSP*CRPGSA
Trigger: AGCGGACCCAGGCCGGCACCATGGAGATTGTGTACG...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582036.5
3UTR CAA 72 bp GAGATGGCCCCCAAGGCATTTTCCAACTGTTCCTTCTaGGTGATGTCCAAGATCACAACTTCAGTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: EMAPKAFSNCSF*VMSKITTSVGS
Trigger: CGAGCCCACTGAAGTTGTGATCTTGGACATCACCAAGAAGGAACAGTTGGAAAATGCCTTGGGGGCCATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR TCA 90 bp CCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGACTGTTCCTTCTTGGTaGTGTCCAAGATCACAACTT +
Preference number: 4 (lower is better)
Translates to: PHTWRLLSWQCVQMVRELTVPSW*CPRSQL
Trigger: AAGTTGTGATCTTGGACATCACCAAGAAGGAACAGT...CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp CCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAACTGTTCCTTCTTGGTaGTGTCCAAGATCACAACTT +
Preference number: 4 (lower is better)
Translates to: PPTYLEAPVVAMCPNGQGTVPSW*CPRSQL
Trigger: AAGTTGTGATCTTGGACATCACCAAGAAGGAACAGT...TCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAATCAGCTCTGCGAAGATaGTGTCGAAGAACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DFLFLICRWTRRVDHGGESALRR*CRRTPP
Trigger: AGGAGGAGTTCTTCGACATCATCTTCGCAGAGCTGA...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp TTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCTCTGGACTTGGTTGCTaGGGCACTGGCGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: FSKWTDFLFLICRWTRRVSGLGC*GTGVSF
Trigger: AAAGCTGACGCCAGTGCCTCAGCAACCAAGTCCAGA...GACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp ATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCAGACTTTCTGTTCCTaGTTTGTAGGTGGACGAGGA +
Preference number: 4 (lower is better)
Translates to: IRITESIQVQQNSQARPAQTFCS*FVGGRG
Trigger: TCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTG...GGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp TTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCTCCGAGAAATTGCACTaGTTCCCGAACTCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: FSKWTDFLFLICRWTRRVSEKLH*FPNSLR
Trigger: GCGCAGCGAGTTCGGGAAGCAGTGCAATTTCTCGGA...GACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTTCCCACCACATGACCTaGCCATCCGTGGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TRIRITESIQVQQNSQARSHHMT*PSVEAE
Trigger: CTCAGCTTCCACGGATGGGCAGGTCATGTGGTGGGA...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTGAGATGACGATGCCCTaGTCGGTCCCCACCATGAAC +
Preference number: 4 (lower is better)
Translates to: TRIRITESIQVQQNSQAREMTMP*SVPTMN
Trigger: GTTCATGGTGGGGACCGAGCAGGGCATCGTCATCTC...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTTTCAAATGTCTTCAGACCAAATaGGGGCTGTCCAGTCGCCAA +
Preference number: 4 (lower is better)
Translates to: VVAMCPNGQGAAWKGIFKCLQTK*GLSSRQ
Trigger: TTGGCGACTGGACAGCCCGCATTTGGTCTGAAGACA...TTTGAAAATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp CCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGAAATGGTCAGGGAGCTaGCTGGAAAGGTATTTTCAA +
Preference number: 4 (lower is better)
Translates to: PHTWRLLSWQCVQMVRELKWSGS*LERYFQ
Trigger: TTGAAAATACCTTTCCAGGCAGCTCCCTGACCATTT...CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAACAAGTTCAGGCTTGTTaGGGTTTTCCAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: DFLFLICRWTRRVDHGGEQVQAC*GFPGPR
Trigger: TCTGGGACCTGGAAAACCCCAACAAGCCTGAACTTG...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAACAGACTTTCTGTTCCTaGTTTGTAGGTGGACGAGGA +
Preference number: 4 (lower is better)
Translates to: DFLFLICRWTRRVDHGGEQTFCS*FVGGRG
Trigger: TCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTG...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp ATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCTCAATGGCATTGTTCTaGTTGATGCAGTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: IRITESIQVQQNSQARPASMALF*LMQCSM
Trigger: CATGGAGCACTGCATCAAGCAGAACAATGCCATTGA...GGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTGCTCATGCCCACAGGTaGCCGCTGAAAATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: TRIRITESIQVQQNSQARAHAHR*PLKIQA
Trigger: TGCTTGGATTTTCAGCGGGCACCTGTGGGCATGAGC...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTATGTTCAGCTCGGCCTaGCGGTCCGAGAAATTGCAC +
Preference number: 4 (lower is better)
Translates to: TRIRITESIQVQQNSQARMFSSA*RSEKLH
Trigger: GTGCAATTTCTCGGACCGCCAGGCCGAGCTGAACAT...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp TTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCCCACCCAGGAGTACGTaGGAATCTTTGGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: FSKWTDFLFLICRWTRRVPPRST*ESLGLN
Trigger: GTTCAACCCCAAAGATTCCCACGTACTCCTGGGTGG...GACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp TTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCTTTCAGCTGACGTCTTaGCCTTGCGGTTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: FSKWTDFLFLICRWTRRVFQLTS*PCGCRR
Trigger: TCTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAA...GACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp TTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCATGGCCATGCAAGTCTaGTTGAGGGTCAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FSKWTDFLFLICRWTRRVMAMQV*LRVKRW
Trigger: CCACCTCTTGACCCTCAACCAGACTTGCATGGCCAT...GACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTGGTTCTCAATCTGGTTaGGGCAGGAAGCAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: TRIRITESIQVQQNSQARGSQSG*GRKQGV
Trigger: CACCCCTTGCTTCCTGCCCCAACCAGATTGAGAACC...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
CDS-3UTR TCA 90 bp ATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCTGGCCTCCTCGTCATTaGAATACTCTTCATAGATGT +
Preference number: 4 (lower is better)
Translates to: IRITESIQVQQNSQARPAWPPRH*NTLHRC
Trigger: ACATCTATGAAGAGTATTTCAATGACGAGGAGGCCA...GGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTTTCAAAATTGATGGTTTTAGCTaGAGGGTCCTCCTCCATCAC +
Preference number: 4 (lower is better)
Translates to: VVAMCPNGQGAAWKGIFKIDGFS*RVLLHH
Trigger: GTGATGGAGGAGGACCCTTCAGCTAAAACCATCAAT...TTTGAAAATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTGCCCTCTTGATTTCCTaGGGGTCCCTGAACACATTG +
Preference number: 4 (lower is better)
Translates to: TRIRITESIQVQQNSQARALLIS*GSLNTL
Trigger: CAATGTGTTCAGGGACCCCCAGGAAATCAAGAGGGC...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCACGAGTGGAGACGATaGCTTCAGAGCAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: TRIRITESIQVQQNSQARHEWRR*LQSKFR
Trigger: CCTGAACTTGCTCTGAAGCCATCGTCTCCACTCGTG...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTGGCAATGTGTCCAAATaGTCAGGGAGCTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: TRIRITESIQVQQNSQARGNVSK*SGSCLE
Trigger: TTCCAGGCAGCTCCCTGACCATTTGGACACATTGCC...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTACTCGCTGCGCTTCTTaGCGTACACGTACACAATCT +
Preference number: 4 (lower is better)
Translates to: TRIRITESIQVQQNSQARTRCAS*RTRTQS
Trigger: AGATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGT...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp TTTAATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCCCATCCGTGGAAGCTaGGAAGCACTCGGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: FNFTRIRITESIQVQQNSPIRGS*EALGAR
Trigger: ACGGGCACCGAGTGCTTCTCAGCTTCCACGGATGGG...GCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp TTTAATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCTGCGGTTGCAGGAGATaGCGATGCCCTGCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: FNFTRIRITESIQVQQNSCGCRR*RCPARS
Trigger: GGACCGAGCAGGGCATCGTCATCTCCTGCAACCGCA...GCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp TTTAATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCACCCTTCCCCACTCCTaGAGGTCTTCCCGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: FNFTRIRITESIQVQQNSTLPHS*RSSRGP
Trigger: AGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGT...GCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp TTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCCAGACTTTCTGTTCCTaGTTTGTAGGTGGACGAGGA +
Preference number: 4 (lower is better)
Translates to: FSKWTDFLFLICRWTRRVQTFCS*FVGGRG
Trigger: TCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTG...GACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp TTTAATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCAGACCTCCAGCAGGGTaGTTGTCCCCAGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: FNFTRIRITESIQVQQNSRPPAG*LSPAGS
Trigger: GCTCCCAGCTGGGGACAACCACCCTGCTGGAGGTCT...GCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp TTTAATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCGTGTTCCGACATGCTaGTCGAGCACTGGATGCCCG +
Preference number: 4 (lower is better)
Translates to: FNFTRIRITESIQVQQNSRVPTC*SSTGCP
Trigger: CGGGCATCCAGTGCTCGATCAGCATGTCGGAACACG...GCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp GCCCCCAAGGCATTTTCCAACTGTTCCTTCTTGGTGATGTCCAAGATCACAACTACTGTTCCTTCTTGGTaGTGTCCAAGATCACAACTT +
Preference number: 4 (lower is better)
Translates to: APKAFSNCSFLVMSKITTTVPSW*CPRSQL
Trigger: AAGTTGTGATCTTGGACATCACCAAGAAGGAACAGT...AGTTGTGATCTTGGACATCACCAAGAAGGAACAGTTGGAAAATGCCTTGGGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR GCA 90 bp AATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAAGACACCCATTGTCCTaGACCCGGAGGCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: NFTRIRITESIQVQQNSQRHPLS*TRRQKR
Trigger: CCTCTTCTGCCTCCGGGTGCAGGACAATGGGTGTCT...TTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
CDS-3UTR GCA 90 bp AATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAATCTGCTCCTCATCCCTaGCCTCCGCCTTACCCTTCT +
Preference number: 4 (lower is better)
Translates to: NFTRIRITESIQVQQNSQSAPHP*PPPYPS
Trigger: AGAAGGGTAAGGCGGAGGGCAGGGATGAGGAGCAGA...TTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAATTTAGTTATTGCAGTTaGTCTCTGAGGAGGGCAATA +
Preference number: 4 (lower is better)
Translates to: DFLFLICRWTRRVDHGGEFSYCS*SLRRAI
Trigger: TATTGCCCTCCTCAGAGAGCAACTGCAATAACTAAA...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
CDS-3UTR CCA 90 bp TTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCTCTCACGCTCAAACATaGAAGAGGCTACGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FSKWTDFLFLICRWTRRVSHAQT*KRLRSS
Trigger: AGAAGAACGTAGCCTCTTCCATGTTTGAGCGTGAGA...GACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp TTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTGTCTTCTTCTGGACTTaGTTGCTGAGGCACTGGCGT +
Preference number: 4 (lower is better)
Translates to: FTRIRITESIQVQQNSQAVFFWT*LLRHWR
Trigger: ACGCCAGTGCCTCAGCAACCAAGTCCAGAAGAAGAC...AGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp AATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAATCCGAGAAATTGCACTaGTTCCCGAACTCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: NFTRIRITESIQVQQNSQSEKLH*FPNSLR
Trigger: GCGCAGCGAGTTCGGGAAGCAGTGCAATTTCTCGGA...TTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR GCA 90 bp TTTAATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCTCTGCTCCTCATCCCTaGCCTCCGCCTTACCCTTCT +
Preference number: 4 (lower is better)
Translates to: FNFTRIRITESIQVQQNSSAPHP*PPPYPS
Trigger: AGAAGGGTAAGGCGGAGGGCAGGGATGAGGAGCAGA...GCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp AATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAATGTTCAGCTCGGCCTaGCGGTCCGAGAAATTGCAC +
Preference number: 4 (lower is better)
Translates to: NFTRIRITESIQVQQNSQMFSSA*RSEKLH
Trigger: GTGCAATTTCTCGGACCGCCAGGCCGAGCTGAACAT...TTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTTCTCACGCTCAAACATaGAAGAGGCTACGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TRIRITESIQVQQNSQARSHAQT*KRLRSS
Trigger: AGAAGAACGTAGCCTCTTCCATGTTTGAGCGTGAGA...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp TTTAATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCTCTGGACTTGGTTGCTaGGGCACTGGCGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: FNFTRIRITESIQVQQNSSGLGC*GTGVSF
Trigger: AAAGCTGACGCCAGTGCCTCAGCAACCAAGTCCAGA...GCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp TTTAATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCTCCAACGTCACGAGTaGAGACGATGGCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: FNFTRIRITESIQVQQNSLQRHE*RRWLQS
Trigger: GCTCTGAAGCCATCGTCTCCACTCGTGACGTTGGAG...GCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp AATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAATACACAGGGTCTCGGTaGCTGGACTCAATGGTGGAT +
Preference number: 4 (lower is better)
Translates to: NFTRIRITESIQVQQNSQYTGSR*LDSMVD
Trigger: ATCCACCATTGAGTCCAGCCACCGAGACCCTGTGTA...TTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR TCA 90 bp AATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAATCAGCTCTGCGAAGATaGTGTCGAAGAACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NFTRIRITESIQVQQNSQSALRR*CRRTPP
Trigger: AGGAGGAGTTCTTCGACATCATCTTCGCAGAGCTGA...TTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp TTTAATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCTTTCAGCTGACGTCTTaGCCTTGCGGTTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: FNFTRIRITESIQVQQNSFQLTS*PCGCRR
Trigger: TCTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAA...GCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp TTTAATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCGTCTTCTTCTGGACTTaGTTGCTGAGGCACTGGCGT +
Preference number: 4 (lower is better)
Translates to: FNFTRIRITESIQVQQNSVFFWT*LLRHWR
Trigger: ACGCCAGTGCCTCAGCAACCAAGTCCAGAAGAAGAC...GCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp TTTAATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCGGCAATGTGTCCAAATaGTCAGGGAGCTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: FNFTRIRITESIQVQQNSGNVSK*SGSCLE
Trigger: TTCCAGGCAGCTCCCTGACCATTTGGACACATTGCC...GCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp TTTAATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGTTCAGGCTTGTTaGGGTTTTCCAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: FNFTRIRITESIQVQQNSQVQAC*GFPGPR
Trigger: TCTGGGACCTGGAAAACCCCAACAAGCCTGAACTTG...GCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp TTTAATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCAGATCACAACTTCAGTaGGCTCGCTCATCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: FNFTRIRITESIQVQQNSRSQLQ*ARSSFG
Trigger: TCCGAAAGATGAGCGAGCCCACTGAAGTTGTGATCT...GCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CCA 90 bp TTTAATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCTCTCACGCTCAAACATaGAAGAGGCTACGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FNFTRIRITESIQVQQNSSHAQT*KRLRSS
Trigger: AGAAGAACGTAGCCTCTTCCATGTTTGAGCGTGAGA...GCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS TCA 90 bp GGGTCGCTGAGCACCCTGGAACCCGGGTGCCAGCTCTGCGGCTGGTaGGGGCCCAGACAGTGCGGAAAGTGGGCAGAGCTGGGGGAATCT +
Preference number: 5 (lower is better)
Translates to: GSLSTLEPGCQLCGW*GPRQCGKWAELGES
Trigger: AGATTCCCCCAGCTCTGCCCACTTTCCGCACTGTCTGGGCCCTCACCAGCCGCAGAGCTGGCACCCGGGTTCCAGGGTGCTCAGCGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579312.1
CDS-3UTR CAA 90 bp GGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGAACTCCTCCTCGGCCTaGCTGACCAGCGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GAAEQPSSSRPSPPTYLENSSSA*LTSASR
Trigger: CCTGGAGGCGCTGGTCAGCAAGGCCGAGGAGGAGTT...CTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS GCA 90 bp TTCTGGGTCTCTGGGGAAGCGTTCAATCCACGGTCGCGGCTCCGGTaGTCCTCAAACGGCGGCGTTTACCGGTTGCTTGGCAACCCCGGC +
Preference number: 5 (lower is better)
Translates to: FWVSGEAFNPRSRLR*SSNGGVYRLLGNPG
Trigger: GCCGGGGTTGCCAAGCAACCGGTAAACGCCGCCGTTTGAGGAGCACCGGAGCCGCGACCGTGGATTGAACGCTTCCCCAGAGACCCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311014.11
CDS CCA 90 bp CATGGTGCCGGCTGCCTGGGTCCGCTCCTTCTGCTTCTGGGTCTCTaGGGAAGCGTTCAATCCACGGTCGCGGCTCCGGTGCTCCTCAAA +
Preference number: 5 (lower is better)
Translates to: HGAGCLGPLLLLLGL*GSVQSTVAAPVLLK
Trigger: TTTGAGGAGCACCGGAGCCGCGACCGTGGATTGAACGCTTCCCCAGAGACCCAGAAGCAGAAGGAGCGGACCCAGGCAGCCGGCACCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311014.11
ENST00000579055.5
CDS CCA 90 bp GGATGTGAACCCCACGAGGACCAAAGCAGCCAAATGGCTGAAGCCTaGGTCGCTGAGCACCCTGGAACCCGGGTGCCAGCTCTGCGGCTG +
Preference number: 5 (lower is better)
Translates to: GCEPHEDQSSQMAEA*VAEHPGTRVPALRL
Trigger: CAGCCGCAGAGCTGGCACCCGGGTTCCAGGGTGCTCAGCGACCCAGGCTTCAGCCATTTGGCTGCTTTGGTCCTCGTGGGGTTCACATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579312.1
CDS CCA 90 bp CCACTCCCCTGGGATGTGAACCCCACGAGGACCAAAGCAGCCAAATaGCTGAAGCCTGGGTCGCTGAGCACCCTGGAACCCGGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: PLPWDVNPTRTKAAK*LKPGSLSTLEPGCQ
Trigger: CTGGCACCCGGGTTCCAGGGTGCTCAGCGACCCAGGCTTCAGCCATTTGGCTGCTTTGGTCCTCGTGGGGTTCACATCCCAGGGGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579312.1
CDS CCA 90 bp CTCCATGGTGCCGGCCTGGGTCCGCTCCTTCTGCTTCTGGGTCTCTaGGGAAGCGTTCAATCCACGGTCGCGGCTCCGGTGCTCCTCAAA +
Preference number: 5 (lower is better)
Translates to: LHGAGLGPLLLLLGL*GSVQSTVAAPVLLK
Trigger: TTTGAGGAGCACCGGAGCCGCGACCGTGGATTGAACGCTTCCCCAGAGACCCAGAAGCAGAAGGAGCGGACCCAGGCCGGCACCATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582036.5
CDS-3UTR CAA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCAAACTCCTCCTCGGCCTaGCTGACCAGCGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ESIQVQQNSQARPARPLPNSSSA*LTSASR
Trigger: CCTGGAGGCGCTGGTCAGCAAGGCCGAGGAGGAGTT...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS CCA 90 bp TCTGCGGCTGGTGAGGGCCCAGACAGTGCGGAAAGTGGGCAGAGCTaGGGGAATCTGGCAGACTTGGGTTCACGCCTGGCTTCTGCCACA +
Preference number: 5 (lower is better)
Translates to: SAAGEGPDSAESGQS*GNLADLGSRLASAT
Trigger: TGTGGCAGAAGCCAGGCGTGAACCCAAGTCTGCCAGATTCCCCCAGCTCTGCCCACTTTCCGCACTGTCTGGGCCCTCACCAGCCGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579312.1
CDS-3UTR CAA 90 bp GGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGTGTGTGGCAGCCCTCTaGATTTCCTGGGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: GAAEQPSSSRPSPPTYLECVAAL*ISWGSL
Trigger: CAGGGACCCCCAGGAAATCAAGAGGGCTGCCACACA...CTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCTTGGCCTTGCGGTaGCAGGAGATGACGATGCCC +
Preference number: 5 (lower is better)
Translates to: AEQPSSSRPSPPTYLEAPVLALR*QEMTMP
Trigger: GGGCATCGTCATCTCCTGCAACCGCAAGGCCAAGAC...AGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS CCA 90 bp CTCGTGTTCCGACATGCTGATCGAGCACTGGATGCCCGTGTCCACTaGGTTCCGCTCCACGAACTGCTCGGCCAGCTCAGGGTTGGGCAT +
Preference number: 5 (lower is better)
Translates to: LVFRHADRALDARVH*VPLHELLGQLRVGH
Trigger: ATGCCCAACCCTGAGCTGGCCGAGCAGTTCGTGGAGCGGAACCCAGTGGACACGGGCATCCAGTGCTCGATCAGCATGTCGGAACACGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS CCA 90 bp AACCGCTCTGAGTTGGCCTCGTGTTCCGACATGCTGATCGAGCACTaGATGCCCGTGTCCACTGGGTTCCGCTCCACGAACTGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: NRSELASCSDMLIEH*MPVSTGFRSTNCSA
Trigger: GGCCGAGCAGTTCGTGGAGCGGAACCCAGTGGACACGGGCATCCAGTGCTCGATCAGCATGTCGGAACACGAGGCCAACTCAGAGCGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS CCA 90 bp CAGACAGTGCGGAAAGTGGGCAGAGCTGGGGGAATCTGGCAGACTTaGGTTCACGCCTGGCTTCTGCCACATGCAGACTGGGAGGCCTCG +
Preference number: 5 (lower is better)
Translates to: QTVRKVGRAGGIWQT*VHAWLLPHADWEAS
Trigger: CGAGGCCTCCCAGTCTGCATGTGGCAGAAGCCAGGCGTGAACCCAAGTCTGCCAGATTCCCCCAGCTCTGCCCACTTTCCGCACTGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579312.1
CDS-3UTR CAA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCATGTGTGGCAGCCCTCTaGATTTCCTGGGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: ESIQVQQNSQARPARPLPCVAAL*ISWGSL
Trigger: CAGGGACCCCCAGGAAATCAAGAGGGCTGCCACACA...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAACTGCCAACTTCCTGTaGCCATCGGGGTGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: PARPLPHTWRLLSWQCVQTANFL*PSGCQE
Trigger: CTCCTGGCACCCCGATGGCAACAGGAAGTTGGCAGT...TTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACGCTGACGTCTTGGCCTaGCGGTTGCAGGAGATGACG +
Preference number: 5 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHADVLA*RLQEMT
Trigger: CGTCATCTCCTGCAACCGCAAGGCCAAGACGTCAGC...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAGCTGACGTCTTGGCCTaGCGGTTGCAGGAGATGACG +
Preference number: 5 (lower is better)
Translates to: PARPLPHTWRLLSWQCVQADVLA*RLQEMT
Trigger: CGTCATCTCCTGCAACCGCAAGGCCAAGACGTCAGC...TTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATAACTCCTCCTCGGCCTaGCTGACCAGCGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RPSPPTYLEAPVVAMCPNNSSSA*LTSASR
Trigger: CCTGGAGGCGCTGGTCAGCAAGGCCGAGGAGGAGTT...ATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp AGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCGGTCTTCTTCTGGACTaGGTTGCTGAGGCACTGGCG +
Preference number: 5 (lower is better)
Translates to: SRTAKLVPPVPSHILGGSGLLLD*VAEALA
Trigger: CGCCAGTGCCTCAGCAACCAAGTCCAGAAGAAGACC...GGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAATGGCGGTCCGAGAAATaGCACTGCTTCCCGAACTCG +
Preference number: 5 (lower is better)
Translates to: PARPLPHTWRLLSWQCVQWRSEK*HCFPNS
Trigger: CGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCCA...TTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACTCGGCCAGCTCAGGGTaGGGCATGATGTCGATGTTC +
Preference number: 5 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHSASSG*GMMSMF
Trigger: GAACATCGACATCATGCCCAACCCTGAGCTGGCCGA...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGTCAAACCGCTCTGAGTaGGCCTCGTGTTCCGACATG +
Preference number: 5 (lower is better)
Translates to: GAAEQPSSSRPSPPTYLESNRSE*ASCSDM
Trigger: CATGTCGGAACACGAGGCCAACTCAGAGCGGTTTGA...CTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGGCAAGTTCAGGCTTGTaGGGGTTTTCCAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: QVQQNSQARPARPLPHTWASSGL*GFSRSQ
Trigger: CTGGGACCTGGAAAACCCCAACAAGCCTGAACTTGC...CCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCAACTCCTCCTCGGCCTaGCTGACCAGCGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: DNRKHSGAAEQPSSSRPSNSSSA*LTSASR
Trigger: CCTGGAGGCGCTGGTCAGCAAGGCCGAGGAGGAGTT...GGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGTTCTTCTGGACTTGGTaGCTGAGGCACTGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: GAAEQPSSSRPSPPTYLEFFWTW*LRHWRQ
Trigger: CTGACGCCAGTGCCTCAGCAACCAAGTCCAGAAGAA...CTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACGGTCTTCTTCTGGACTaGGTTGCTGAGGCACTGGCG +
Preference number: 5 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHGLLLD*VAEALA
Trigger: CGCCAGTGCCTCAGCAACCAAGTCCAGAAGAAGACC...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS TCA 90 bp GGCGGTCCGAGAAATTGCACTGCTTCCCGAACTCGCTGCGCTTCTTaGCGTACACGTACACAATCTCCATGGTGCCGGCTGCCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: GGPRNCTASRTRCAS*RTRTQSPWCRLPGS
Trigger: GGACCCAGGCAGCCGGCACCATGGAGATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311014.11
ENST00000579055.5
CDS TCA 90 bp GGCGGTCCGAGAAATTGCACTGCTTCCCGAACTCGCTGCGCTTCTTaGCGTACACGTACACAATCTCCATGGTGCCGGCCTGGGTCCGCT +
Preference number: 5 (lower is better)
Translates to: GGPRNCTASRTRCAS*RTRTQSPWCRPGSA
Trigger: AGCGGACCCAGGCCGGCACCATGGAGATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582036.5
CDS GCA 90 bp GCTGCTCATGCCCACAGGTGCCCGCTGAAAATCCAAGCAGGAGTATaGCACTGCCAACTTCCTGTTGCCATCGGGGTGCCAGGAGAGGTG +
Preference number: 5 (lower is better)
Translates to: AAHAHRCPLKIQAGV*HCQLPVAIGVPGEV
Trigger: CACCTCTCCTGGCACCCCGATGGCAACAGGAAGTTGGCAGTGGCATACTCCTGCTTGGATTTTCAGCGGGCACCTGTGGGCATGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGTGTGTGGCAGCCCTCTaGATTTCCTGGGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: EGRSWRRNPSPLLKVFPRCVAAL*ISWGSL
Trigger: CAGGGACCCCCAGGAAATCAAGAGGGCTGCCACACA...CCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp ATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGCCCTGCCAACTGCCAACTTCCTGTaGCCATCGGGGTGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: IMEEKPFPTPEGLPEALPTANFL*PSGCQE
Trigger: CTCCTGGCACCCCGATGGCAACAGGAAGTTGGCAGT...TGGCAGGGCCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACGCAAGTTCAGGCTTGTaGGGGTTTTCCAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHASSGL*GFSRSQ
Trigger: CTGGGACCTGGAAAACCCCAACAAGCCTGAACTTGC...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGTCCCCACCATGAACTaGGTGGGCAAAGTAGATTCG +
Preference number: 5 (lower is better)
Translates to: GAAEQPSSSRPSPPTYLEVPTMN*VGKVDS
Trigger: CGAATCTACTTTGCCCACCAAGTTCATGGTGGGGAC...CTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGGTCTTGGCCTTGCGGTaGCAGGAGATGACGATGCCC +
Preference number: 5 (lower is better)
Translates to: GGSCRGNVSKWSGSCLERVLALR*QEMTMP
Trigger: GGGCATCGTCATCTCCTGCAACCGCAAGGCCAAGAC...CCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGCTGACGTCTTGGCCTaGCGGTTGCAGGAGATGACG +
Preference number: 5 (lower is better)
Translates to: RGGSIMEEKPFPTPEGLPADVLA*RLQEMT
Trigger: CGTCATCTCCTGCAACCGCAAGGCCAAGACGTCAGC...GGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACTTTTCAGCTGACGTCTaGGCCTTGCGGTTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHFSADV*ALRLQE
Trigger: CTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAAA...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTGCGATGAGACACCCATaGTCCTGCACCCGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGAMRHP*SCTRRQ
Trigger: CTGCCTCCGGGTGCAGGACAATGGGTGTCTCATCGC...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
CDS-3UTR CAA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCAGCCATGCAAGTCTGGTaGAGGGTCAAGAGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: ESIQVQQNSQARPARPLPAMQVW*RVKRWE
Trigger: TTCCCACCTCTTGACCCTCAACCAGACTTGCATGGC...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp AGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCGGAGATCCTAGGAATTaGTCCAGAAGCTGCATCCGC +
Preference number: 5 (lower is better)
Translates to: SRTAKLVPPVPSHILGGSGDPRN*SRSCIR
Trigger: GCGGATGCAGCTTCTGGACAAATTCCTAGGATCTCC...GGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
CDS-3UTR CAA 90 bp AGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTAGGTTCTCAATCTGGTaGGGGCAGGAAGCAAGGGGT +
Preference number: 5 (lower is better)
Translates to: RTAKLVPPVPSHILGGSCRFSIW*GQEARG
Trigger: ACCCCTTGCTTCCTGCCCCAACCAGATTGAGAACCT...ACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
CDS-3UTR CAA 90 bp GGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGTGGCGGTCCGAGAAATaGCACTGCTTCCCGAACTCG +
Preference number: 5 (lower is better)
Translates to: GGSIMEEKPFPTPEGLPEWRSEK*HCFPNS
Trigger: CGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCCA...CTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCTGGCGGTCCGAGAAATaGCACTGCTTCCCGAACTCG +
Preference number: 5 (lower is better)
Translates to: RGGSIMEEKPFPTPEGLPWRSEK*HCFPNS
Trigger: CGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCCA...GGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGTGGCGGTCCGAGAAATaGCACTGCTTCCCGAACTCG +
Preference number: 5 (lower is better)
Translates to: EEGRSWRRNPSPLLKVFPWRSEK*HCFPNS
Trigger: CGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCCA...CGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp TTCCCGGCTGTCTTCAGACCAAATGCGGGCTGTCCAGTCGCCAACCGTCAGGAATCGGCCAGCTCAGGGTaGGGCATGATGTCGATGTTC +
Preference number: 5 (lower is better)
Translates to: FPAVFRPNAGCPVANRQESASSG*GMMSMF
Trigger: GAACATCGACATCATGCCCAACCCTGAGCTGGCCGA...TTCCTGACGGTTGGCGACTGGACAGCCCGCATTTGGTCTGAAGACAGCCGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CAA 90 bp GGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGGGTCCCTGAACACATaGATGGTTTTAGCTGAAGGG +
Preference number: 5 (lower is better)
Translates to: GAAEQPSSSRPSPPTYLEGSLNT*MVLAEG
Trigger: CCCTTCAGCTAAAACCATCAATGTGTTCAGGGACCC...CTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp AGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACATACTTGGAGGCTCCGGGTCCCTGAACACATaGATGGTTTTAGCTGAAGGG +
Preference number: 5 (lower is better)
Translates to: SRTAKLVPPVPSHILGGSGSLNT*MVLAEG
Trigger: CCCTTCAGCTAAAACCATCAATGTGTTCAGGGACCC...GGAGCCTCCAAGTATGTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCAGTCCCCACCATGAACTaGGTGGGCAAAGTAGATTCG +
Preference number: 5 (lower is better)
Translates to: ESIQVQQNSQARPARPLPVPTMN*VGKVDS
Trigger: CGAATCTACTTTGCCCACCAAGTTCATGGTGGGGAC...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTGTCTTGGCCTTGCGGTaGCAGGAGATGACGATGCCC +
Preference number: 5 (lower is better)
Translates to: GRGGSIMEEKPFPTPEGLVLALR*QEMTMP
Trigger: GGGCATCGTCATCTCCTGCAACCGCAAGGCCAAGAC...AAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGCTGACGTCTTGGCCTaGCGGTTGCAGGAGATGACG +
Preference number: 5 (lower is better)
Translates to: PLPHTWRLLSWQCVQMVRADVLA*RLQEMT
Trigger: CGTCATCTCCTGCAACCGCAAGGCCAAGACGTCAGC...CCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCGATGAGACACCCATaGTCCTGCACCCGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: PPTYLEAPVVAMCPNGQGAMRHP*SCTRRQ
Trigger: CTGCCTCCGGGTGCAGGACAATGGGTGTCTCATCGC...TCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
CDS-3UTR CAA 90 bp CGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCTTCTTCTGGACTaGGTTGCTGAGGCACTGGCG +
Preference number: 5 (lower is better)
Translates to: RPSPPTYLEAPVVAMCPNGLLLD*VAEALA
Trigger: CGCCAGTGCCTCAGCAACCAAGTCCAGAAGAAGACC...ATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATTCAAACCGCTCTGAGTaGGCCTCGTGTTCCGACATG +
Preference number: 5 (lower is better)
Translates to: RPSPPTYLEAPVVAMCPNSNRSE*ASCSDM
Trigger: CATGTCGGAACACGAGGCCAACTCAGAGCGGTTTGA...ATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp ATCCTGGTGGTAAAGAAAACGGTCGGCCTCACGGGGCTCCAGGCAGCATCAGTGTCAAACCGCTCTGAGTaGGCCTCGTGTTCCGACATG +
Preference number: 5 (lower is better)
Translates to: ILVVKKTVGLTGLQAASVSNRSE*ASCSDM
Trigger: CATGTCGGAACACGAGGCCAACTCAGAGCGGTTTGA...CACTGATGCTGCCTGGAGCCCCGTGAGGCCGACCGTTTTCTTTACCACCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CAA 90 bp CCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAAACCGCTCTGAGTaGGCCTCGTGTTCCGACATG +
Preference number: 5 (lower is better)
Translates to: PVPSHILGGSCRGNVSKWSNRSE*ASCSDM
Trigger: CATGTCGGAACACGAGGCCAACTCAGAGCGGTTTGA...CCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGATGTGTGGCAGCCCTCTaGATTTCCTGGGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: PPTYLEAPVVAMCPNGQGCVAAL*ISWGSL
Trigger: CAGGGACCCCCAGGAAATCAAGAGGGCTGCCACACA...TCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAACTGCCAACTTCCTGTaGCCATCGGGGTGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: PPTYLEAPVVAMCPNGQGTANFL*PSGCQE
Trigger: CTCCTGGCACCCCGATGGCAACAGGAAGTTGGCAGT...TCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGCAAGTTCAGGCTTGTaGGGGTTTTCCAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: RGGSIMEEKPFPTPEGLPASSGL*GFSRSQ
Trigger: CTGGGACCTGGAAAACCCCAACAAGCCTGAACTTGC...GGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp AAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCACAGTACGTGGGAATCTTaGGGGTTGAACTCCAACGTC +
Preference number: 5 (lower is better)
Translates to: KAFRCSRTAKLVPPVPSHSTWES*GLNSNV
Trigger: GACGTTGGAGTTCAACCCCAAAGATTCCCACGTACT...GTGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGTTTTCAGCTGACGTCTaGGCCTTGCGGTTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: EEGRSWRRNPSPLLKVFPFSADV*ALRLQE
Trigger: CTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAAA...CGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTTTTCAGCTGACGTCTaGGCCTTGCGGTTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: GGSCRGNVSKWSGSCLERFSADV*ALRLQE
Trigger: CTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAAA...CCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGTTCTTCTGGACTTGGTaGCTGAGGCACTGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: GGSIMEEKPFPTPEGLPEFFWTW*LRHWRQ
Trigger: CTGACGCCAGTGCCTCAGCAACCAAGTCCAGAAGAA...CTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp AGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATCCCCTCCCACATACTaGGAGGCTCCTGTCGTGGCA +
Preference number: 5 (lower is better)
Translates to: RLLSWQCVQMVRELPGKVSPPTY*EAPVVA
Trigger: TGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGA...TACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS TCA 90 bp TCCTCTCCCTCCTCCACCACCTGGTCTTCTTCTGGACTTGGTTGCTaGGGCACTGGCGTCAGCTTTATGGCGTCTGCCTCCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SSPSSTTWSSSGLGC*GTGVSFMASASFFF
Trigger: GAAGAAGAAGGAGGCAGACGCCATAAAGCTGACGCCAGTGCCTCAGCAACCAAGTCCAGAAGAAGACCAGGTGGTGGAGGAGGGAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS GCA 90 bp TCCTCTCCCTCCTCCACCACCTGGTCTTCTTCTGGACTTGGTTGCTaGTGCAGGGGAAGACAGCACAGAAGTGTTGGTGTTGGTAGGGGA +
Preference number: 5 (lower is better)
Translates to: SSPSSTTWSSSGLGC*CRGRQHRSVGVGRG
Trigger: TCCCCTACCAACACCAACACTTCTGTGCTGTCTTCCCCTGCAGCAGCAACCAAGTCCAGAAGAAGACCAGGTGGTGGAGGAGGGAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579312.1
CDS CCA 90 bp CTCCTCCACCACCTGGTCTTCTTCTGGACTTGGTTGCTGAGGCACTaGCGTCAGCTTTATGGCGTCTGCCTCCTTCTTCTTCAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LLHHLVFFWTWLLRH*RQLYGVCLLLLQLC
Trigger: GCAGAGCTGAAGAAGAAGGAGGCAGACGCCATAAAGCTGACGCCAGTGCCTCAGCAACCAAGTCCAGAAGAAGACCAGGTGGTGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTTCAAACCGCTCTGAGTaGGCCTCGTGTTCCGACATG +
Preference number: 5 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGSNRSE*ASCSDM
Trigger: CATGTCGGAACACGAGGCCAACTCAGAGCGGTTTGA...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGAGCAAGTTCAGGCTaGTTGGGGTTTTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: EEGRSWRRNPSPLLKVFPRASSG*LGFSRS
Trigger: GGACCTGGAAAACCCCAACAAGCCTGAACTTGCTCT...CGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGGGTCTTCTTCTGGACTaGGTTGCTGAGGCACTGGCG +
Preference number: 5 (lower is better)
Translates to: PHTWRLLSWQCVQMVRELGLLLD*VAEALA
Trigger: CGCCAGTGCCTCAGCAACCAAGTCCAGAAGAAGACC...CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTTCCCCTCCCACATACTaGGAGGCTCCTGTCGTGGCA +
Preference number: 5 (lower is better)
Translates to: APVVAMCPNGQGAAWKGISPPTY*EAPVVA
Trigger: TGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGA...AATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGAGATCCTAGGAATTaGTCCAGAAGCTGCATCCGC +
Preference number: 5 (lower is better)
Translates to: RPSPPTYLEAPVVAMCPNGDPRN*SRSCIR
Trigger: GCGGATGCAGCTTCTGGACAAATTCCTAGGATCTCC...ATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
CDS-3UTR CAA 90 bp GGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTGCGATGAGACACCCATaGTCCTTCAAGCTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: GRGGSIMEEKPFPTPEGLAMRHP*SFKLRV
Trigger: CACCCTCAGCTTGAAGGACAATGGGTGTCTCATCGC...AAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582036.5
CDS GCA 90 bp CACTGGCGTCAGCTTTATGGCGTCTGCCTCCTTCTTCTTCAGCTCTaGGAAGATGATGTCGAAGAACTCCTCCTCGGCCTTGCTGACCAG +
Preference number: 5 (lower is better)
Translates to: HWRQLYGVCLLLLQL*EDDVEELLLGLADQ
Trigger: CTGGTCAGCAAGGCCGAGGAGGAGTTCTTCGACATCATCTTCGCAGAGCTGAAGAAGAAGGAGGCAGACGCCATAAAGCTGACGCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGAACTCGCTGCGCTTCTaGACGTACACGTACACAATC +
Preference number: 5 (lower is better)
Translates to: PVPSHILGGSCRGNVSKWNSLRF*TYTYTI
Trigger: GATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGTT...CCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTTCGGCCAGCTCAGGGTaGGGCATGATGTCGATGTTC +
Preference number: 5 (lower is better)
Translates to: APVVAMCPNGQGAAWKGISASSG*GMMSMF
Trigger: GAACATCGACATCATGCCCAACCCTGAGCTGGCCGA...AATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTCCCGCCCGTCCCCTCCCAATGGCATTGTTCTGCTaGATGCAGTGCTCCATGATA +
Preference number: 5 (lower is better)
Translates to: ESIQVQQNSQARPARPLPMALFC*MQCSMI
Trigger: TATCATGGAGCACTGCATCAAGCAGAACAATGCCAT...TGGGAGGGGACGGGCGGGACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTAGAGCAAGTTCAGGCTaGTTGGGGTTTTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGRASSG*LGFSRS
Trigger: GGACCTGGAAAACCCCAACAAGCCTGAACTTGCTCT...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CGCCCGTCCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATTGGGAATCTTTGGGGTaGAACTCCAACGTCACGAGT +
Preference number: 5 (lower is better)
Translates to: RPSPPTYLEAPVVAMCPNWESLG*NSNVTS
Trigger: ACTCGTGACGTTGGAGTTCAACCCCAAAGATTCCCA...ATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGACGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCTGGGAATCTTTGGGGTaGAACTCCAACGTCACGAGT +
Preference number: 5 (lower is better)
Translates to: RGGSIMEEKPFPTPEGLPWESLG*NSNVTS
Trigger: ACTCGTGACGTTGGAGTTCAACCCCAAAGATTCCCA...GGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAAGCGATGAGACACCCATaGTCCTGCACCCGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: DFLFLICRWTRRVDHGGEAMRHP*SCTRRQ
Trigger: CTGCCTCCGGGTGCAGGACAATGGGTGTCTCATCGC...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
CDS-3UTR CAA 90 bp TTCGAACTCCAGGGAGATGGCCCCCAAGGCATTTTCCAACTGTTCCTTCTTGGTTCCCCTCCCACATACTaGGAGGCTCCTGTCGTGGCA +
Preference number: 5 (lower is better)
Translates to: FELQGDGPQGIFQLFLLGSPPTY*EAPVVA
Trigger: TGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGA...ACCAAGAAGGAACAGTTGGAAAATGCCTTGGGGGCCATCTCCCTGGAGTTCGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CAA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTGGTCTTCTTCTGGACTaGGTTGCTGCCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGGLLLD*VAAFSF
Trigger: GAAGGAGAAGGCAGCAACCAAGTCCAGAAGAAGACC...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS GCA 90 bp ATGATGTCGATGTTCAGCTCGGCCTGGCGGTCCGAGAAATTGCACTaGTTCCCGAACTCGCTGCGCTTCTTGACGTACACGTACACAATC +
Preference number: 5 (lower is better)
Translates to: MMSMFSSAWRSEKLH*FPNSLRFLTYTYTI
Trigger: GATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCCAGGCCGAGCTGAACATCGACATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTAACTCGCTGCGCTTCTaGACGTACACGTACACAATC +
Preference number: 5 (lower is better)
Translates to: GRGGSIMEEKPFPTPEGLNSLRF*TYTYTI
Trigger: GATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGTT...AAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CCCCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGAACTCGCTGCGCTTCTaGACGTACACGTACACAATC +
Preference number: 5 (lower is better)
Translates to: PLPHTWRLLSWQCVQMVRNSLRF*TYTYTI
Trigger: GATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGTT...CCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAAGAGCAAGTTCAGGCTaGTTGGGGTTTTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: PPTYLEAPVVAMCPNGQGRASSG*LGFSRS
Trigger: GGACCTGGAAAACCCCAACAAGCCTGAACTTGCTCT...TCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTAGTACGTGGGAATCTTaGGGGTTGAACTCCAACGTC +
Preference number: 5 (lower is better)
Translates to: EAPVVAMCPNGQGAAWKGSTWES*GLNSNV
Trigger: GACGTTGGAGTTCAACCCCAAAGATTCCCACGTACT...ACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTAGTACGTGGGAATCTTaGGGGTTGAACTCCAACGTC +
Preference number: 5 (lower is better)
Translates to: GRGGSIMEEKPFPTPEGLSTWES*GLNSNV
Trigger: GACGTTGGAGTTCAACCCCAAAGATTCCCACGTACT...AAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GGTGCCTGGCCTCCAGGATCTTCTCTCGCCGGGTCTCACGCTCAAACATGGAAGTCCAACTGTTCCTTCTaGGTGATGTCCAAGATCACA +
Preference number: 5 (lower is better)
Translates to: GAWPPGSSLAGSHAQTWKSNCSF*VMSKIT
Trigger: TGTGATCTTGGACATCACCAAGAAGGAACAGTTGGA...CTTCCATGTTTGAGCGTGAGACCCGGCGAGAGAAGATCCTGGAGGCCAGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CAA 90 bp ATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCGTCCCCACCATGAACTaGGTGGGCAAAGTAGATTCG +
Preference number: 5 (lower is better)
Translates to: ICRWTRRVDHGGETLPHSVPTMN*VGKVDS
Trigger: CGAATCTACTTTGCCCACCAAGTTCATGGTGGGGAC...GGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAAGCTGACGTCTTGGCCTaGCGGTTGCAGGAGATGACG +
Preference number: 5 (lower is better)
Translates to: DFLFLICRWTRRVDHGGEADVLA*RLQEMT
Trigger: CGTCATCTCCTGCAACCGCAAGGCCAAGACGTCAGC...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGATCATGGAGGAGAATCCCCTCCCACATACTaGGAGGCTCCTGTCGTGGCA +
Preference number: 5 (lower is better)
Translates to: DFLFLICRWTRRVDHGGESPPTY*EAPVVA
Trigger: TGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGA...TTCTCCTCCATGATCGACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGTTCTTCTGGACTTGGTaGCTGCCTTCTCCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: LPHTWRLLSWQCVQMVREFFWTW*LPSPSA
Trigger: GGCTGAAGGAGAAGGCAGCAACCAAGTCCAGAAGAA...CTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS TCA 90 bp GTCCATTGTAGCAGCCACCCAGGAGTACGTGGGAATCTTTGGGGTTaGACTCCAACGTCACGAGTGGAGACGATGGCTTCAGAGCAAGTT +
Preference number: 5 (lower is better)
Translates to: VHCSSHPGVRGNLWG*TPTSRVETMASEQV
Trigger: AACTTGCTCTGAAGCCATCGTCTCCACTCGTGACGTTGGAGTTCAACCCCAAAGATTCCCACGTACTCCTGGGTGGCTGCTACAATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS CCA 90 bp CAGCTCCAGGTTCTCAATCTGGTTGGGGCAGGAAGCAAGGGGTGGTaGGGAGATCCTAGGAATTTGTCCAGAAGCTGCATCCGCATTAAA +
Preference number: 5 (lower is better)
Translates to: QLQVLNLVGAGSKGW*GDPRNLSRSCIRIK
Trigger: TTTAATGCGGATGCAGCTTCTGGACAAATTCCTAGGATCTCCCCACCACCCCTTGCTTCCTGCCCCAACCAGATTGAGAACCTGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
CDS-3UTR CAA 90 bp CCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGAACTCGCTGCGCTTCTaGACGTACACGTACACAATC +
Preference number: 5 (lower is better)
Translates to: PHTWRLLSWQCVQMVRELNSLRF*TYTYTI
Trigger: GATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGTT...CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp AGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTAGGGTCCCTGAACACATaGATGGTTTTAGCTGAAGGG +
Preference number: 5 (lower is better)
Translates to: RLLSWQCVQMVRELPGKVGSLNT*MVLAEG
Trigger: CCCTTCAGCTAAAACCATCAATGTGTTCAGGGACCC...TACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp TCCATTGTAGCAGCCACCCAGGAGTACGTGGGAATCTTTGGGGTTGAACTCCAAGCAAGTTCAGGCTTGTaGGGGTTTTCCAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: SIVAATQEYVGIFGVELQASSGL*GFSRSQ
Trigger: CTGGGACCTGGAAAACCCCAACAAGCCTGAACTTGC...TTGGAGTTCAACCCCAAAGATTCCCACGTACTCCTGGGTGGCTGCTACAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CAA 90 bp GAGGGTCGATCATGGAGGAGAAACCCTTCCCCACTCCTGAAGGTCTTCCCGAGGTCCAACTGTTCCTTCTaGGTGATGTCCAAGATCACA +
Preference number: 5 (lower is better)
Translates to: EGRSWRRNPSPLLKVFPRSNCSF*VMSKIT
Trigger: TGTGATCTTGGACATCACCAAGAAGGAACAGTTGGA...CCTCGGGAAGACCTTCAGGAGTGGGGAAGGGTTTCTCCTCCATGATCGACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS GCA 90 bp TTCTGGACTTGGTTGCTGAGGCACTGGCGTCAGCTTTATGGCGTCTaGCTCCTTCTTCTTCAGCTCTGCGAAGATGATGTCGAAGAACTC +
Preference number: 5 (lower is better)
Translates to: FWTWLLRHWRQLYGV*LLLLQLCEDDVEEL
Trigger: GAGTTCTTCGACATCATCTTCGCAGAGCTGAAGAAGAAGGAGGCAGACGCCATAAAGCTGACGCCAGTGCCTCAGCAACCAAGTCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTGGGTCCCTGAACACATaGATGGTTTTAGCTGAAGGG +
Preference number: 5 (lower is better)
Translates to: APVVAMCPNGQGAAWKGIGSLNT*MVLAEG
Trigger: CCCTTCAGCTAAAACCATCAATGTGTTCAGGGACCC...AATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp TTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGTCTTGGCCTTGCGGTaGCAGGAGATGACGATGCCC +
Preference number: 5 (lower is better)
Translates to: FSKWTDFLFLICRWTRRVVLALR*QEMTMP
Trigger: GGGCATCGTCATCTCCTGCAACCGCAAGGCCAAGAC...GACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp TCCATTGTAGCAGCCACCCAGGAGTACGTGGGAATCTTTGGGGTTGAACTCCAAAACTCGCTGCGCTTCTaGACGTACACGTACACAATC +
Preference number: 5 (lower is better)
Translates to: SIVAATQEYVGIFGVELQNSLRF*TYTYTI
Trigger: GATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGTT...TTGGAGTTCAACCCCAAAGATTCCCACGTACTCCTGGGTGGCTGCTACAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CAA 90 bp CTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGATGGCATTGTTCTGCTaGATGCAGTGCTCCATGATA +
Preference number: 5 (lower is better)
Translates to: LPHTWRLLSWQCVQMVREMALFC*MQCSMI
Trigger: TATCATGGAGCACTGCATCAAGCAGAACAATGCCAT...CTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGATGGCATTGTTCTGCTaGATGCAGTGCTCCATGATA +
Preference number: 5 (lower is better)
Translates to: PHTWRLLSWQCVQMVRELMALFC*MQCSMI
Trigger: TATCATGGAGCACTGCATCAAGCAGAACAATGCCAT...CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTACTGCCAACTTCCTGTaGCCATCGGGGTGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: TRIRITESIQVQQNSQARTANFL*PSGCQE
Trigger: CTCCTGGCACCCCGATGGCAACAGGAAGTTGGCAGT...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CCTCCCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGATCCAACTGTTCCTTCTaGGTGATGTCCAAGATCACA +
Preference number: 5 (lower is better)
Translates to: PPTYLEAPVVAMCPNGQGSNCSF*VMSKIT
Trigger: TGTGATCTTGGACATCACCAAGAAGGAACAGTTGGA...TCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp CCACATACTTGGAGGCTCCTGTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGTCCAACTGTTCCTTCTaGGTGATGTCCAAGATCACA +
Preference number: 5 (lower is better)
Translates to: PHTWRLLSWQCVQMVRELSNCSF*VMSKIT
Trigger: TGTGATCTTGGACATCACCAAGAAGGAACAGTTGGA...CAGCTCCCTGACCATTTGGACACATTGCCACGACAGGAGCCTCCAAGTATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp GTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTTTCAAATTTTCAGCTGACGTCTaGGCCTTGCGGTTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: VVAMCPNGQGAAWKGIFKFSADV*ALRLQE
Trigger: CTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAAA...TTTGAAAATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTTCCCCTCCCACATACTaGGAGGCTCCTGTCGTGGCA +
Preference number: 5 (lower is better)
Translates to: TRIRITESIQVQQNSQARSPPTY*EAPVVA
Trigger: TGCCACGACAGGAGCCTCCAAGTATGTGGGAGGGGA...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTTGGCGGTCCGAGAAATaGCACTGCTTCCCGAACTCG +
Preference number: 5 (lower is better)
Translates to: TRIRITESIQVQQNSQARWRSEK*HCFPNS
Trigger: CGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCCA...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp TTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCTTCTTCTGGACTTGGTaGCTGAGGCACTGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: FSKWTDFLFLICRWTRRVFFWTW*LRHWRQ
Trigger: CTGACGCCAGTGCCTCAGCAACCAAGTCCAGAAGAA...GACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp TTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCAGGTTCTCAATCTGGTaGGGGCAGGAAGCAAGGGGT +
Preference number: 5 (lower is better)
Translates to: FSKWTDFLFLICRWTRRVRFSIW*GQEARG
Trigger: ACCCCTTGCTTCCTGCCCCAACCAGATTGAGAACCT...GACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
CDS-3UTR CAA 90 bp GTCGTGGCAATGTGTCCAAATGGTCAGGGAGCTGCCTGGAAAGGTATTTTCAAATGGGAATCTTTGGGGTaGAACTCCAACGTCACGAGT +
Preference number: 5 (lower is better)
Translates to: VVAMCPNGQGAAWKGIFKWESLG*NSNVTS
Trigger: ACTCGTGACGTTGGAGTTCAACCCCAAAGATTCCCA...TTTGAAAATACCTTTCCAGGCAGCTCCCTGACCATTTGGACACATTGCCACGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp TTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCGTCCCCACCATGAACTaGGTGGGCAAAGTAGATTCG +
Preference number: 5 (lower is better)
Translates to: FSKWTDFLFLICRWTRRVVPTMN*VGKVDS
Trigger: CGAATCTACTTTGCCCACCAAGTTCATGGTGGGGAC...GACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp TTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTGTCTTGGCCTTGCGGTaGCAGGAGATGACGATGCCC +
Preference number: 5 (lower is better)
Translates to: FTRIRITESIQVQQNSQAVLALR*QEMTMP
Trigger: GGGCATCGTCATCTCCTGCAACCGCAAGGCCAAGAC...AGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTTTTTCAGCTGACGTCTaGGCCTTGCGGTTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: TRIRITESIQVQQNSQARFSADV*ALRLQE
Trigger: CTCCTGCAACCGCAAGGCCAAGACGTCAGCTGAAAA...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp TTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTTCGGCCAGCTCAGGGTaGGGCATGATGTCGATGTTC +
Preference number: 5 (lower is better)
Translates to: FTRIRITESIQVQQNSQASASSG*GMMSMF
Trigger: GAACATCGACATCATGCCCAACCCTGAGCTGGCCGA...AGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp TTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCTGGGAATCTTTGGGGTaGAACTCCAACGTCACGAGT +
Preference number: 5 (lower is better)
Translates to: FSKWTDFLFLICRWTRRVWESLG*NSNVTS
Trigger: ACTCGTGACGTTGGAGTTCAACCCCAAAGATTCCCA...GACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp TTTTCAAAGTGGACAGACTTTCTGTTCCTGATTTGTAGGTGGACGAGGAGGGTCAGTACGTGGGAATCTTaGGGGTTGAACTCCAACGTC +
Preference number: 5 (lower is better)
Translates to: FSKWTDFLFLICRWTRRVSTWES*GLNSNV
Trigger: GACGTTGGAGTTCAACCCCAAAGATTCCCACGTACT...GACCCTCCTCGTCCACCTACAAATCAGGAACAGAAAGTCTGTCCACTTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp ACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTCGTGTCCCCACCATGAACTaGGTGGGCAAAGTAGATTCG +
Preference number: 5 (lower is better)
Translates to: TRIRITESIQVQQNSQARVPTMN*VGKVDS
Trigger: CGAATCTACTTTGCCCACCAAGTTCATGGTGGGGAC...ACGAGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp AATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAACTGCCAACTTCCTGTaGCCATCGGGGTGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: NFTRIRITESIQVQQNSQTANFL*PSGCQE
Trigger: CTCCTGGCACCCCGATGGCAACAGGAAGTTGGCAGT...TTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp AATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAATGTGTGGCAGCCCTCTaGATTTCCTGGGGGTCCAGA +
Preference number: 5 (lower is better)
Translates to: NFTRIRITESIQVQQNSQCVAAL*ISWGSR
Trigger: TCTGGACCCCCAGGAAATCAAGAGGGCTGCCACACA...TTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579055.5
CDS-3UTR CAA 90 bp TTTAATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCTCGGCCAGCTCAGGGTaGGGCATGATGTCGATGTTC +
Preference number: 5 (lower is better)
Translates to: FNFTRIRITESIQVQQNSSASSG*GMMSMF
Trigger: GAACATCGACATCATGCCCAACCCTGAGCTGGCCGA...GCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp TTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCTTGGGAATCTTTGGGGTaGAACTCCAACGTCACGAGT +
Preference number: 5 (lower is better)
Translates to: FTRIRITESIQVQQNSQAWESLG*NSNVTS
Trigger: ACTCGTGACGTTGGAGTTCAACCCCAAAGATTCCCA...AGCTTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp AATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCCAAGCCATGCAAGTCTGGTaGAGGGTCAAGAGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: NFTRIRITESIQVQQNSQAMQVW*RVKRWE
Trigger: TTCCCACCTCTTGACCCTCAACCAGACTTGCATGGC...TTGGCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp TTTAATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCTTCTTCTGGACTTGGTaGCTGAGGCACTGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: FNFTRIRITESIQVQQNSFFWTW*LRHWRQ
Trigger: CTGACGCCAGTGCCTCAGCAACCAAGTCCAGAAGAA...GCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS-3UTR CAA 90 bp TTTAATTTTACAAGAATTAGGATAACAGAAAGCATTCAGGTGCAGCAGAACAGCAGAGCAAGTTCAGGCTaGTTGGGGTTTTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: FNFTRIRITESIQVQQNSRASSG*LGFSRS
Trigger: GGACCTGGAAAACCCCAACAAGCCTGAACTTGCTCT...GCTGTTCTGCTGCACCTGAATGCTTTCTGTTATCCTAATTCTTGTAAAATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS CCA 72 bp GCCGGCCTGGGTCCGCTCCTTCTGCTTCTGGGTCTCTaGGGAAGCGTTCAATCCACGGTCGCGGCTCCGGTG +
Preference number: 6 (lower is better)
Translates to: AGLGPLLLLLGL*GSVQSTVAAPV
Trigger: CACCGGAGCCGCGACCGTGGATTGAACGCTTCCCCAGAGACCCAGAAGCAGAAGGAGCGGACCCAGGCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582036.5
CDS CCA 72 bp GGCTGCCTGGGTCCGCTCCTTCTGCTTCTGGGTCTCTaGGGAAGCGTTCAATCCACGGTCGCGGCTCCGGTG +
Preference number: 6 (lower is better)
Translates to: GCLGPLLLLLGL*GSVQSTVAAPV
Trigger: CACCGGAGCCGCGACCGTGGATTGAACGCTTCCCCAGAGACCCAGAAGCAGAAGGAGCGGACCCAGGCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311014.11
ENST00000579055.5
CDS GCA 72 bp AGCGCCTCCAGGTCTACGGCCAGCTCCTCATCGGTCTaGTCCTCATCCCTGCCCTCCGCCTTACCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SASRSTASSSSV*SSSLPSALPFS
Trigger: GGAGAAGGGTAAGGCGGAGGGCAGGGATGAGGAGCAGACCGATGAGGAGCTGGCCGTAGACCTGGAGGCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS CCA 72 bp ATGGTGCCGGCTGCCTGGGTCCGCTCCTTCTGCTTCTaGGTCTCTGGGGAAGCGTTCAATCCACGGTCGCGG +
Preference number: 6 (lower is better)
Translates to: MVPAAWVRSFCF*VSGEAFNPRSR
Trigger: CCGCGACCGTGGATTGAACGCTTCCCCAGAGACCCAGAAGCAGAAGGAGCGGACCCAGGCAGCCGGCACCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311014.11
ENST00000579055.5
CDS CCA 72 bp TCCATGGTGCCGGCCTGGGTCCGCTCCTTCTGCTTCTaGGTCTCTGGGGAAGCGTTCAATCCACGGTCGCGG +
Preference number: 6 (lower is better)
Translates to: SMVPAWVRSFCF*VSGEAFNPRSR
Trigger: CCGCGACCGTGGATTGAACGCTTCCCCAGAGACCCAGAAGCAGAAGGAGCGGACCCAGGCCGGCACCATGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582036.5
CDS GCA 72 bp TCTGGGGAAGCGTTCAATCCACGGTCGCGGCTCCGGTaGTCCTCAAACGGCGGCGTTTACCGGTTGCTTGGC +
Preference number: 6 (lower is better)
Translates to: SGEAFNPRSRLR*SSNGGVYRLLG
Trigger: GCCAAGCAACCGGTAAACGCCGCCGTTTGAGGAGCACCGGAGCCGCGACCGTGGATTGAACGCTTCCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311014.11
CDS GCA 72 bp CTGGCAGACTTGGGTTCACGCCTGGCTTCTGCCACATaGAGACTGGGAGGCCTCGGGCTAGCTCCTCCTGAG +
Preference number: 6 (lower is better)
Translates to: LADLGSRLASAT*RLGGLGLAPPE
Trigger: CTCAGGAGGAGCTAGCCCGAGGCCTCCCAGTCTGCATGTGGCAGAAGCCAGGCGTGAACCCAAGTCTGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579312.1
CDS GCA 72 bp GGGGAATCTGGCAGACTTGGGTTCACGCCTGGCTTCTaGCACATGCAGACTGGGAGGCCTCGGGCTAGCTCC +
Preference number: 6 (lower is better)
Translates to: GESGRLGFTPGF*HMQTGRPRASS
Trigger: GGAGCTAGCCCGAGGCCTCCCAGTCTGCATGTGGCAGAAGCCAGGCGTGAACCCAAGTCTGCCAGATTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579312.1
CDS CCA 72 bp CGACATGCTGATCGAGCACTGGATGCCCGTGTCCACTaGGTTCCGCTCCACGAACTGCTCGGCCAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: RHADRALDARVH*VPLHELLGQLR
Trigger: CCTGAGCTGGCCGAGCAGTTCGTGGAGCGGAACCCAGTGGACACGGGCATCCAGTGCTCGATCAGCATGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS CCA 72 bp GGTGAGGGCCCAGACAGTGCGGAAAGTGGGCAGAGCTaGGGGAATCTGGCAGACTTGGGTTCACGCCTGGCT +
Preference number: 6 (lower is better)
Translates to: GEGPDSAESGQS*GNLADLGSRLA
Trigger: AGCCAGGCGTGAACCCAAGTCTGCCAGATTCCCCCAGCTCTGCCCACTTTCCGCACTGTCTGGGCCCTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579312.1
CDS CAA 90 bp CCAGACAGTGCGGAAAGTGGGCAGAGCTGGGGGAATCTGGCAGACTaGGGTTCACGCCTGGCTTCTGCCACATGCAGACTGGGAGGCCTC +
Preference number: 6 (lower is better)
Translates to: PDSAESGQSWGNLAD*GSRLASATCRLGGL
Trigger: GAGGCCTCCCAGTCTGCATGTGGCAGAAGCCAGGCGTGAACCCAAGTCTGCCAGATTCCCCCAGCTCTGCCCACTTTCCGCACTGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579312.1
CDS GCA 72 bp TGGATGCCCGTGTCCACTGGGTTCCGCTCCACGAACTaGTCGGCCAGCTCAGGGTTGGGCATGATGTCGATG +
Preference number: 6 (lower is better)
Translates to: WMPVSTGFRSTN*SASSGLGMMSM
Trigger: CATCGACATCATGCCCAACCCTGAGCTGGCCGAGCAGTTCGTGGAGCGGAACCCAGTGGACACGGGCATCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS CCA 72 bp GAGTTGGCCTCGTGTTCCGACATGCTGATCGAGCACTaGATGCCCGTGTCCACTGGGTTCCGCTCCACGAAC +
Preference number: 6 (lower is better)
Translates to: ELASCSDMLIEH*MPVSTGFRSTN
Trigger: GTTCGTGGAGCGGAACCCAGTGGACACGGGCATCCAGTGCTCGATCAGCATGTCGGAACACGAGGCCAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS CCA 72 bp CGGAAAGTGGGCAGAGCTGGGGGAATCTGGCAGACTTaGGTTCACGCCTGGCTTCTGCCACATGCAGACTGG +
Preference number: 6 (lower is better)
Translates to: RKVGRAGGIWQT*VHAWLLPHADW
Trigger: CCAGTCTGCATGTGGCAGAAGCCAGGCGTGAACCCAAGTCTGCCAGATTCCCCCAGCTCTGCCCACTTTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579312.1
CDS CCA 72 bp TGGGATGTGAACCCCACGAGGACCAAAGCAGCCAAATaGCTGAAGCCTGGGTCGCTGAGCACCCTGGAACCC +
Preference number: 6 (lower is better)
Translates to: WDVNPTRTKAAK*LKPGSLSTLEP
Trigger: GGGTTCCAGGGTGCTCAGCGACCCAGGCTTCAGCCATTTGGCTGCTTTGGTCCTCGTGGGGTTCACATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579312.1
CDS CAA 72 bp TCTGCGAAGATGATGTCGAAGAACTCCTCCTCGGCCTaGCTGACCAGCGCCTCCAGGTCTACGGCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SAKMMSKNSSSA*LTSASRSTASS
Trigger: GGAGCTGGCCGTAGACCTGGAGGCGCTGGTCAGCAAGGCCGAGGAGGAGTTCTTCGACATCATCTTCGCAGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS CAA 72 bp GCGGAAAGTGGGCAGAGCTGGGGGAATCTGGCAGACTaGGGTTCACGCCTGGCTTCTGCCACATGCAGACTG +
Preference number: 6 (lower is better)
Translates to: AESGQSWGNLAD*GSRLASATCRL
Trigger: CAGTCTGCATGTGGCAGAAGCCAGGCGTGAACCCAAGTCTGCCAGATTCCCCCAGCTCTGCCCACTTTCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579312.1
CDS CAA 90 bp TGGCGGTCCGAGAAATTGCACTGCTTCCCGAACTCGCTGCGCTTCTaGACGTACACGTACACAATCTCCATGGTGCCGGCCTGGGTCCGC +
Preference number: 6 (lower is better)
Translates to: WRSEKLHCFPNSLRF*TYTYTISMVPAWVR
Trigger: GCGGACCCAGGCCGGCACCATGGAGATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582036.5
CDS TCA 72 bp CAAACCGCTCTGAGTTGGCCTCGTGTTCCGACATGCTaGTCGAGCACTGGATGCCCGTGTCCACTGGGTTCC +
Preference number: 6 (lower is better)
Translates to: QTALSWPRVPTC*SSTGCPCPLGS
Trigger: GGAACCCAGTGGACACGGGCATCCAGTGCTCGATCAGCATGTCGGAACACGAGGCCAACTCAGAGCGGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS GCA 72 bp GCCCACAGGTGCCCGCTGAAAATCCAAGCAGGAGTATaGCACTGCCAACTTCCTGTTGCCATCGGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: AHRCPLKIQAGV*HCQLPVAIGVP
Trigger: TGGCACCCCGATGGCAACAGGAAGTTGGCAGTGGCATACTCCTGCTTGGATTTTCAGCGGGCACCTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS CCA 72 bp CAGACAGTGCGGAAAGTGGGCAGAGCTGGGGGAATCTaGCAGACTTGGGTTCACGCCTGGCTTCTGCCACAT +
Preference number: 6 (lower is better)
Translates to: QTVRKVGRAGGI*QTWVHAWLLPH
Trigger: ATGTGGCAGAAGCCAGGCGTGAACCCAAGTCTGCCAGATTCCCCCAGCTCTGCCCACTTTCCGCACTGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579312.1
CDS CAA 90 bp TGGCGGTCCGAGAAATTGCACTGCTTCCCGAACTCGCTGCGCTTCTaGACGTACACGTACACAATCTCCATGGTGCCGGCTGCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: WRSEKLHCFPNSLRF*TYTYTISMVPAAWV
Trigger: GACCCAGGCAGCCGGCACCATGGAGATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311014.11
ENST00000579055.5
CDS CAA 90 bp TTCTTCAGCTCTGCGAAGATGATGTCGAAGAACTCCTCCTCGGCCTaGCTGACCAGCGCCTCCAGGTCTACGGCCAGCTCCTCATCGGTC +
Preference number: 6 (lower is better)
Translates to: FFSSAKMMSKNSSSA*LTSASRSTASSSSV
Trigger: GACCGATGAGGAGCTGGCCGTAGACCTGGAGGCGCTGGTCAGCAAGGCCGAGGAGGAGTTCTTCGACATCATCTTCGCAGAGCTGAAGAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS TCA 72 bp TCCTCCACCACCTGGTCTTCTTCTGGACTTGGTTGCTaGGGCACTGGCGTCAGCTTTATGGCGTCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: SSTTWSSSGLGC*GTGVSFMASAS
Trigger: GGAGGCAGACGCCATAAAGCTGACGCCAGTGCCTCAGCAACCAAGTCCAGAAGAAGACCAGGTGGTGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS GCA 72 bp ATGTTCAGCTCGGCCTGGCGGTCCGAGAAATTGCACTaGTTCCCGAACTCGCTGCGCTTCTTGACGTACACG +
Preference number: 6 (lower is better)
Translates to: MFSSAWRSEKLH*FPNSLRFLTYT
Trigger: CGTGTACGTCAAGAAGCGCAGCGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCCAGGCCGAGCTGAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS CAA 72 bp ATGTCGATGTTCAGCTCGGCCTGGCGGTCCGAGAAATaGCACTGCTTCCCGAACTCGCTGCGCTTCTTGACG +
Preference number: 6 (lower is better)
Translates to: MSMFSSAWRSEK*HCFPNSLRFLT
Trigger: CGTCAAGAAGCGCAGCGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCCAGGCCGAGCTGAACATCGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS CAA 72 bp CCTCTCCCTCCTCCACCACCTGGTCTTCTTCTGGACTaGGTTGCTGCTGCAGGGGAAGACAGCACAGAAGTG +
Preference number: 6 (lower is better)
Translates to: PLPPPPPGLLLD*VAAAGEDSTEV
Trigger: CACTTCTGTGCTGTCTTCCCCTGCAGCAGCAACCAAGTCCAGAAGAAGACCAGGTGGTGGAGGAGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579312.1
CDS CAA 90 bp TTGGGCATGATGTCGATGTTCAGCTCGGCCTGGCGGTCCGAGAAATaGCACTGCTTCCCGAACTCGCTGCGCTTCTTGACGTACACGTAC +
Preference number: 6 (lower is better)
Translates to: LGMMSMFSSAWRSEK*HCFPNSLRFLTYTY
Trigger: GTACGTGTACGTCAAGAAGCGCAGCGAGTTCGGGAAGCAGTGCAATTTCTCGGACCGCCAGGCCGAGCTGAACATCGACATCATGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS GCA 72 bp TCATCTTTCTCCACTTTCTTCCGGAAACGGATGGTCTaGTCCAGCTCCAGGGGGTTCACGTCCTTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: SSFSTFFRKRMV*SSSRGFTSLGQ
Trigger: CTGGCCCAAGGACGTGAACCCCCTGGAGCTGGAGCAGACCATCCGTTTCCGGAAGAAAGTGGAGAAAGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS GCA 72 bp CACCCATTGTCCTTCAAGCTGAGGGTGGGATCGCACTaGTCGAACATGAAGTCCCAGATATCCAGGGTTCCG +
Preference number: 6 (lower is better)
Translates to: HPLSFKLRVGSH*SNMKSQISRVP
Trigger: CGGAACCCTGGATATCTGGGACTTCATGTTCGAGCAGTGCGATCCCACCCTCAGCTTGAAGGACAATGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582036.5
CDS CCA 72 bp CTGGACTTGGTTGCTGAGGCACTGGCGTCAGCTTTATaGCGTCTGCCTCCTTCTTCTTCAGCTCTGCGAAGA +
Preference number: 6 (lower is better)
Translates to: LDLVAEALASAL*RLPPSSSALRR
Trigger: TCTTCGCAGAGCTGAAGAAGAAGGAGGCAGACGCCATAAAGCTGACGCCAGTGCCTCAGCAACCAAGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS CAA 72 bp GAGAAATTGCACTGCTTCCCGAACTCGCTGCGCTTCTaGACGTACACGTACACAATCTCCATGGTGCCGGCC +
Preference number: 6 (lower is better)
Translates to: EKLHCFPNSLRF*TYTYTISMVPA
Trigger: GGCCGGCACCATGGAGATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGTTCGGGAAGCAGTGCAATTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582036.5
CDS TCA 72 bp AGAAATTGCACTGCTTCCCGAACTCGCTGCGCTTCTTaGCGTACACGTACACAATCTCCATGGTGCCGGCTG +
Preference number: 6 (lower is better)
Translates to: RNCTASRTRCAS*RTRTQSPWCRL
Trigger: CAGCCGGCACCATGGAGATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGTTCGGGAAGCAGTGCAATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
CDS TCA 72 bp TTCAGGCTTGTTGGGGTTTTCCAGGTCCCAGATGTATaGATCGCTGCTCATGCCCACAGGTGCCCGCTGAAA +
Preference number: 6 (lower is better)
Translates to: FRLVGVFQVPDV*IAAHAHRCPLK
Trigger: TTTCAGCGGGCACCTGTGGGCATGAGCAGCGATTCATACATCTGGGACCTGGAAAACCCCAACAAGCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS TCA 72 bp AGAAATTGCACTGCTTCCCGAACTCGCTGCGCTTCTTaGCGTACACGTACACAATCTCCATGGTGCCGGCCT +
Preference number: 6 (lower is better)
Translates to: RNCTASRTRCAS*RTRTQSPWCRP
Trigger: AGGCCGGCACCATGGAGATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGTTCGGGAAGCAGTGCAATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582036.5
CDS GCA 72 bp GGTTTTCCAGGTCCCAGATGTATGAATCGCTGCTCATaGCCACAGGTGCCCGCTGAAAATCCAAGCAGGAGT +
Preference number: 6 (lower is better)
Translates to: GFPGPRCMNRCS*PQVPAENPSRS
Trigger: ACTCCTGCTTGGATTTTCAGCGGGCACCTGTGGGCATGAGCAGCGATTCATACATCTGGGACCTGGAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS GCA 72 bp TGGTTGCTGAGGCACTGGCGTCAGCTTTATGGCGTCTaGCTCCTTCTTCTTCAGCTCTGCGAAGATGATGTC +
Preference number: 6 (lower is better)
Translates to: WLLRHWRQLYGV*LLLLQLCEDDV
Trigger: GACATCATCTTCGCAGAGCTGAAGAAGAAGGAGGCAGACGCCATAAAGCTGACGCCAGTGCCTCAGCAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS GCA 72 bp TCCTCCACCACCTGGTCTTCTTCTGGACTTGGTTGCTaGTGCAGGGGAAGACAGCACAGAAGTGTTGGTGTT +
Preference number: 6 (lower is better)
Translates to: SSTTWSSSGLGC*CRGRQHRSVGV
Trigger: AACACCAACACTTCTGTGCTGTCTTCCCCTGCAGCAGCAACCAAGTCCAGAAGAAGACCAGGTGGTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579312.1
CDS CCA 72 bp GTTCTCAATCTGGTTGGGGCAGGAAGCAAGGGGTGGTaGGGAGATCCTAGGAATTTGTCCAGAAGCTGCATC +
Preference number: 6 (lower is better)
Translates to: VLNLVGAGSKGW*GDPRNLSRSCI
Trigger: GATGCAGCTTCTGGACAAATTCCTAGGATCTCCCCACCACCCCTTGCTTCCTGCCCCAACCAGATTGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
CDS CAA 72 bp GAGAAATTGCACTGCTTCCCGAACTCGCTGCGCTTCTaGACGTACACGTACACAATCTCCATGGTGCCGGCT +
Preference number: 6 (lower is better)
Translates to: EKLHCFPNSLRF*TYTYTISMVPA
Trigger: AGCCGGCACCATGGAGATTGTGTACGTGTACGTCAAGAAGCGCAGCGAGTTCGGGAAGCAGTGCAATTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
CDS TCA 72 bp ATGTATGAATCGCTGCTCATGCCCACAGGTGCCCGCTaGAAATCCAAGCAGGAGTATGCCACTGCCAACTTC +
Preference number: 6 (lower is better)
Translates to: MYESLLMPTGAR*KSKQEYATANF
Trigger: GAAGTTGGCAGTGGCATACTCCTGCTTGGATTTTCAGCGGGCACCTGTGGGCATGAGCAGCGATTCATACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS GCA 72 bp CAGCTTTATGGCGTCTGCCTCCTTCTTCTTCAGCTCTaGGAAGATGATGTCGAAGAACTCCTCCTCGGCCTT +
Preference number: 6 (lower is better)
Translates to: QLYGVCLLLLQL*EDDVEELLLGL
Trigger: AAGGCCGAGGAGGAGTTCTTCGACATCATCTTCGCAGAGCTGAAGAAGAAGGAGGCAGACGCCATAAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579490.5
ENST00000582036.5
CDS CAA 72 bp ACGAGTGGAGACGATGGCTTCAGAGCAAGTTCAGGCTaGTTGGGGTTTTCCAGGTCCCAGATGTATGAATCG +
Preference number: 6 (lower is better)
Translates to: TSGDDGFRASSG*LGFSRSQMYES
Trigger: CGATTCATACATCTGGGACCTGGAAAACCCCAACAAGCCTGAACTTGCTCTGAAGCCATCGTCTCCACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311014.11
ENST00000446837.2
ENST00000579055.5
ENST00000579490.5
ENST00000582036.5
CDS GCA 72 bp TATATGCTAAGCATTACCCTGTTTAGTTATTGCAGTTaGTCTCTGAGGAGGGCAATAAAAATTTTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: YMLSITLFSYCS*SLRRAIKILAR
Trigger: CCTGGCCAAAATTTTTATTGCCCTCCTCAGAGAGCAACTGCAATAACTAAACAGGGTAATGCTTAGCATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5
CDS GCA 72 bp GCCGACTATATGCTAAGCATTACCCTGTTTAGTTATTaGAGTTGCTCTCTGAGGAGGGCAATAAAAATTTTG +
Preference number: 6 (lower is better)
Translates to: ADYMLSITLFSY*SCSLRRAIKIL
Trigger: CAAAATTTTTATTGCCCTCCTCAGAGAGCAACTGCAATAACTAAACAGGGTAATGCTTAGCATATAGTCGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446837.2
ENST00000579490.5