RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAI1 (Homo sapiens)

Ensembl gene IDs: ENSG00000122735

Ensembl transcript IDs: ENST00000242317.9, ENST00000437363.5, ENST00000442556.1, ENST00000470169.5, ENST00000470982.5, ENST00000485580.1, ENST00000488369.1, ENST00000488790.1, ENST00000614641.4

Found 407 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTaGGTGCTAAGGCTGGGCTGGGTACCAGGGTCAAGCCCTAGGAGT +
Preference number: 1 (lower is better)
Translates to: KKGRCWDLIRSGVTC*VLRLGWVPGSSPRS
Trigger: ACTCCTAGGGCTTGACCCTGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
3UTR CCA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTaGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGG +
Preference number: 1 (lower is better)
Translates to: DLIRSGVTCWVLRLG*VPGSSPRSTVFKRW
Trigger: CCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
3UTR CCA 90 bp TCATCGCCCACAATGATGATGGGGTGGATGAGATTGAACTGCACGTaGGTGAGCCTGTTCTTTTTGGCCGCCACAGGCTGGTTGCAGATG +
Preference number: 1 (lower is better)
Translates to: SSPTMMMGWMRLNCT*VSLFFLAATGWLQM
Trigger: CATCTGCAACCAGCCTGTGGCGGCCAAAAAGAACAGGCTCACCCACGTGCAGTTCAATCTCATCCACCCCATCATCATTGTGGGCGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470169.5
3UTR CCA 90 bp AGGCTGATGATGTGCCCACGGTCATCGCCCACAATGATGATGGGGTaGATGAGATTGAACTGCACGTGGGTGAGCCTGTTCTTTTTGGCC +
Preference number: 1 (lower is better)
Translates to: RLMMCPRSSPTMMMG*MRLNCTWVSLFFLA
Trigger: GGCCAAAAAGAACAGGCTCACCCACGTGCAGTTCAATCTCATCCACCCCATCATCATTGTGGGCGATGACCGTGGGCACATCATCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470169.5
3UTR GCA 90 bp TTTGGCATCTTGCGCAAATTGGGTGAGAGCTTGAGGCTGATGATGTaGCCACGGTCATCGCCCACAATGATGATGGGGTGGATGAGATTG +
Preference number: 1 (lower is better)
Translates to: FGILRKLGESLRLMM*PRSSPTMMMGWMRL
Trigger: CAATCTCATCCACCCCATCATCATTGTGGGCGATGACCGTGGGCACATCATCAGCCTCAAGCTCTCACCCAATTTGCGCAAGATGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
3UTR-3UTR CCA 90 bp AGGCTGATGATGTGCCCACGGTCATCGCCCACAATGATGATGGGGTGGATGAGATTGGCCGCCACAGGCTaGTTGCAGATGGCCTCATAC +
Preference number: 2 (lower is better)
Translates to: RLMMCPRSSPTMMMGWMRLAATG*LQMASY
Trigger: GTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAA...TCTCATCCACCCCATCATCATTGTGGGCGATGACCGTGGGCACATCATCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
3UTR-3UTR CCA 90 bp GACCTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTGCTAAGGCTGGGCTaGGTACCAGGGTCAAGCCCT +
Preference number: 2 (lower is better)
Translates to: DLKEQNKKGRCWDLIRSGVLRLG*VPGSSP
Trigger: AGGGCTTGACCCTGGTACCCAGCCCAGCCTTAGCAC...CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
3UTR-3UTR CCA 90 bp AGGCTGATGATGTGCCCACGGTCATCGCCCACAATGATGATGGGGTGGATGAGACACAGTAGAAGAGTATaGCGCCCAGGCCACATCACC +
Preference number: 2 (lower is better)
Translates to: RLMMCPRSSPTMMMGWMRHSRRV*RPGHIT
Trigger: GGTGATGTGGCCTGGGCGCCATACTCTTCTACTGTG...TCTCATCCACCCCATCATCATTGTGGGCGATGACCGTGGGCACATCATCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
3UTR-3UTR GCA 90 bp ATCTTGCGCAAATTGGGTGAGAGCTTGAGGCTGATGATGTGCCCACGGTCATCGCCGCCACAGGCTGGTTaGAGATGGCCTCATACTTGT +
Preference number: 2 (lower is better)
Translates to: ILRKLGESLRLMMCPRSSPPQAG*RWPHTC
Trigger: ACAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGG...CGATGACCGTGGGCACATCATCAGCCTCAAGCTCTCACCCAATTTGCGCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
3UTR CAA 90 bp ATGGGGTGGATGAGATTGAACTGCACGTGGGTGAGCCTGTTCTTTTaGGCCGCCACAGGCTGGTTGCAGATGGCCTCATACTTGTTGATG +
Preference number: 2 (lower is better)
Translates to: MGWMRLNCTWVSLFF*AATGWLQMASYLLM
Trigger: CATCAACAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAAAAAGAACAGGCTCACCCACGTGCAGTTCAATCTCATCCACCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470169.5
3UTR-3UTR GCA 90 bp CTGTTCTTTTTGGCCGCCACAGGCTGGTTGCAGATGGCCTCATACTTGTTGATGCCCATCTGTGGTGACTaGTGCGAACACAGTAGAAGA +
Preference number: 2 (lower is better)
Translates to: LFFLAATGWLQMASYLLMPICGD*CEHSRR
Trigger: TCTTCTACTGTGTTCGCAGCAGTCACCACAGATGGG...CATCAACAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAAAAAGAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470169.5
3UTR-3UTR CCA 90 bp GATGATGTGCCCACGGTCATCGCCCACAATGATGATGGGGTGGATGAGATTGAAGCTAAGTCAAATATGTaGGCCTTCCCATCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: DDVPTVIAHNDDGVDEIEAKSNM*AFPSVV
Trigger: CACCACAGATGGGAAGGCCCACATATTTGACTTAGC...TTCAATCTCATCCACCCCATCATCATTGTGGGCGATGACCGTGGGCACATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
3UTR-3UTR GCA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAAGGAGTGGGGTCACATaGTGGGTGCTAAGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVERSGVT*WVLRLG
Trigger: GCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCT...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
3UTR-3UTR CCA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACAGTGGGGTCACATGCTaGGTGCTAAGGCTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDSGVTC*VLRLGW
Trigger: CCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACT...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
3UTR-3UTR TCA 90 bp ATCGCCCACAATGATGATGGGGTGGATGAGATTGAACTGCACGTGGGTGAGCCTTGGCCTCATACTTGTTaGTGGCTAAGTCAAATATGT +
Preference number: 2 (lower is better)
Translates to: IAHNDDGVDEIELHVGEPWPHTC*WLSQIC
Trigger: ACATATTTGACTTAGCCATCAACAAGTATGAGGCCA...AGGCTCACCCACGTGCAGTTCAATCTCATCCACCCCATCATCATTGTGGGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
3UTR-3UTR CCA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACGGACCTGATCAGGAGTaGGGTCACATGCTGGGTGCT +
Preference number: 2 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDGPDQE*GHMLGA
Trigger: AGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
3UTR-3UTR TCA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGAAGATGCTGGGACCTaGTCAGGAGTGGGGTCACAT +
Preference number: 2 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVEEDAGT*SGVGSH
Trigger: ATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTC...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
3UTR-3UTR GCA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAAGTCCTGGGGTAAGGTaGTGGGACCTTAAGGAACAG +
Preference number: 2 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVESPGVR*WDLKEQ
Trigger: CTGTTCCTTAAGGTCCCAGCACCTTACCCCAGGACT...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
3UTR-3UTR CCA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAAAGAAGGGAAGATGCTaGGACCTGATCAGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVEKKGRC*DLIRSG
Trigger: CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTT...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
3UTR-3UTR CCA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACAAGAAGGGAAGATGCTaGGACCTGATCAGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDKKGRC*DLIRSG
Trigger: CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTT...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
3UTR-3UTR CCA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAACCTGGGGTAAGGTGCTaGGACCTTAAGGAACAGAAC +
Preference number: 2 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVEPGVRC*DLKEQN
Trigger: GTTCTGTTCCTTAAGGTCCCAGCACCTTACCCCAGG...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
3UTR CCA 72 bp AGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTaGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTC +
Preference number: 3 (lower is better)
Translates to: RSGVTCWVLRLG*VPGSSPRSTVF
Trigger: GAATACAGTACTCCTAGGGCTTGACCCTGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
3UTR-3UTR CAA 90 bp GATGTGCCCACGGTCATCGCCCACAATGATGATGGGGTGGATGAGATTGAACTGGCCGCCACAGGCTGGTaGCAGATGGCCTCATACTTG +
Preference number: 3 (lower is better)
Translates to: DVPTVIAHNDDGVDEIELAATGW*QMASYL
Trigger: CAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGGC...CAGTTCAATCTCATCCACCCCATCATCATTGTGGGCGATGACCGTGGGCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
3UTR-3UTR CAA 90 bp CTTGAGGCTGATGATGTGCCCACGGTCATCGCCCACAATGATGATGGGGTGGATGTGAGCCTGTTCTTTTaGGCCGCCACAGGCTGGTTG +
Preference number: 3 (lower is better)
Translates to: LEADDVPTVIAHNDDGVDVSLFF*AATGWL
Trigger: CAACCAGCCTGTGGCGGCCAAAAAGAACAGGCTCAC...ATCCACCCCATCATCATTGTGGGCGATGACCGTGGGCACATCATCAGCCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470169.5
3UTR GCA 72 bp GTCAAATATGTGGGCCTTCCCATCTGTGGTGACTGCTaGGAACACAGTAGAAGAGTATGGCGCCCAGGCCAC +
Preference number: 3 (lower is better)
Translates to: VKYVGLPICGDC*EHSRRVWRPGH
Trigger: GTGGCCTGGGCGCCATACTCTTCTACTGTGTTCGCAGCAGTCACCACAGATGGGAAGGCCCACATATTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
3UTR GCA 72 bp TTGCGCAAATTGGGTGAGAGCTTGAGGCTGATGATGTaGCCACGGTCATCGCCCACAATGATGATGGGGTGG +
Preference number: 3 (lower is better)
Translates to: LRKLGESLRLMM*PRSSPTMMMGW
Trigger: CCACCCCATCATCATTGTGGGCGATGACCGTGGGCACATCATCAGCCTCAAGCTCTCACCCAATTTGCGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
3UTR CCA 72 bp ACGTGGGTGAGCCTGTTCTTTTTGGCCGCCACAGGCTaGTTGCAGATGGCCTCATACTTGTTGATGGCTAAG +
Preference number: 3 (lower is better)
Translates to: TWVSLFFLAATG*LQMASYLLMAK
Trigger: CTTAGCCATCAACAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAAAAAGAACAGGCTCACCCACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470169.5
3UTR TCA 72 bp CCGCCACAGGCTGGTTGCAGATGGCCTCATACTTGTTaGTGGCTAAGTCAAATATGTGGGCCTTCCCATCTG +
Preference number: 3 (lower is better)
Translates to: PPQAGCRWPHTC*WLSQICGPSHL
Trigger: CAGATGGGAAGGCCCACATATTTGACTTAGCCATCAACAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR TCA 90 bp GGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCTCCAGCAGAGGGCAGTaGCGGACAGGCGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: GPDQEWGHMLGAKAGLGTSSRGQ*RTGAWL
Trigger: AAGCCAAGCGCCTGTCCGTCACTGCCCTCTGCTGGA...GGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCAGGAGTGGGGTCACATaGTGGGTGCTAAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GPDQEWGHMLGAKAGLGTRSGVT*WVLRLG
Trigger: GCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCT...GGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCACTGCAGAAGGAGGGCTaGGAGTGGGGCTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPLQKEG*EWGFLR
Trigger: CCTCAAGAAGCCCCACTCCCAGCCCTCCTTCTGCAG...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCACGCCGCTGTTGCTGCTaGACATGTACTCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPRRCCC*TCTQGS
Trigger: GCTTCCCTGAGTACATGTTCAGCAGCAACAGCGGCG...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCAGGGTCCCCGTGCCCTTaGAGGATAGAATCCAACTCC +
Preference number: 4 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPGSPCP*RIESNS
Trigger: GGAGTTGGATTCTATCCTGCAAGGGCACGGGGACCC...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCACGTTGTGGGTCCCCGTaGCCTTGCAGGATAGAATCC +
Preference number: 4 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPRCGSP*PCRIES
Trigger: GGATTCTATCCTGCAAGGGCACGGGGACCCACAACG...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCCAGGAACTTCCGTGGTaGTGCCTTCCACCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GPDQEWGHMLGAKAGLGTQELPW*CLPPSA
Trigger: AGCTGAAGGTGGAAGGCAGCACCACGGAAGTTCCTG...GGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTCCACAACCCACTGGGTaGAGCTGCAACCCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKAPQPTG*SCNPSG
Trigger: TCCTGAGGGGTTGCAGCTGCACCCAGTGGGTTGTGG...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGAGGAGGCTCCGTCTaGCATTCTCGATCCCGGACA +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKAGGGSV*HSRSRT
Trigger: TGTCCGGGATCGAGAATGCCAGACGGAGCCTCCTCC...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCATTGGCCGCCACAGGCTaGTTGCAGATGGCCTCATAC +
Preference number: 4 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPLAATG*LQMASY
Trigger: GTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAA...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCGGACACAGTGTCCACTaGCATGTTGTGGGCGTCATA +
Preference number: 4 (lower is better)
Translates to: GPDQEWGHMLGAKAGLGTGHSVH*HVVGVI
Trigger: TATGACGCCCACAACATGTCAGTGGACACTGTGTCC...GGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR TCA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCAGAAGATGCTGGGACCTaGTCAGGAGTGGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPEDAGT*SGVGSH
Trigger: ATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTC...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR GCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGTCCCCGTGCCCTTaGAGGATAGAATCCAACTCC +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKAGSPCP*RIESNS
Trigger: GGAGTTGGATTCTATCCTGCAAGGGCACGGGGACCC...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTCGTTGTGGGTCCCCGTaGCCTTGCAGGATAGAATCC +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKARCGSP*PCRIES
Trigger: GGATTCTATCCTGCAAGGGCACGGGGACCCACAACG...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTCAGGGTCTGAGTGCTTaGCAGACTTGGCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKAQGLSA*QTWLSC
Trigger: GCAGCTCAGCCAAGTCTGGCAAGCACTCAGACCCTG...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCACACACAGGGTCTGAGTaGTTGCCAGACTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPHTGSE*LPDLAE
Trigger: CTCAGCCAAGTCTGGCAAGCACTCAGACCCTGTGTG...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCACCCTTCTGCACCTCCTaGCCCTTCTTTTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPPFCTS*PFFSFG
Trigger: GCCAAAGGAAAAGAAGGGGCAGGAGGTGCAGAAGGG...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCACTGAAAAGTTTGTCCTaGGAGGAGGCTCCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPLKSLS*EEAPSG
Trigger: GCCAGACGGAGCCTCCTCCCAGGACAAACTTTTCAG...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGAGTGCCACAACCCACTaGGTGCAGCTGCAACCCCTC +
Preference number: 4 (lower is better)
Translates to: EGKMLGPDQEWGHMLGAKSATTH*VQLQPL
Trigger: GAGGGGTTGCAGCTGCACCCAGTGGGTTGTGGCACT...CTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCGGGGTCTTGATGGTGTaGTCCCAGATCTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: GPDQEWGHMLGAKAGLGTGVLMV*SQIFTV
Trigger: GACAGTGAAGATCTGGGACCACACCATCAAGACCCC...GGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCCCTGGGGTAAGGTGCTaGGACCTTAAGGAACAGAAC +
Preference number: 4 (lower is better)
Translates to: GPDQEWGHMLGAKAGLGTPGVRC*DLKEQN
Trigger: GTTCTGTTCCTTAAGGTCCCAGCACCTTACCCCAGG...GGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR TCA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCACTGATTGGCTGTGGCTaGAAAGTTTGTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPLIGCG*KVCPGR
Trigger: CCTCCCAGGACAAACTTTTCAGCCACAGCCAATCAG...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp CCATCTGTGGTGACTGCTGCGAACACAGTAGAAGAGTATGGCGCCCAGGCCACACATCCTTCTGCCACTTaGCCTGCCACACAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PSVVTAANTVEEYGAQATHPSAT*PATQGL
Trigger: CAGACCCTGTGTGGCAGGTCAAGTGGCAGAAGGATG...TGTGGCCTGGGCGCCATACTCTTCTACTGTGTTCGCAGCAGTCACCACAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR TCA 90 bp GGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCCACATCACCCACGGCTaGGTTCAGGTCATAGATGAA +
Preference number: 4 (lower is better)
Translates to: GPDQEWGHMLGAKAGLGTHITHG*VQVIDE
Trigger: TTCATCTATGACCTGAACTCAGCCGTGGGTGATGTG...GGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR TCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGAAGATGCTGGGACCTaGTCAGGAGTGGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKAEDAGT*SGVGSH
Trigger: ATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTC...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR GCA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCAGACAATGTTCTGGGGTaGGTGTGGGTTGTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPDNVLG*VWVVGC
Trigger: ACAGCCAACAACCCACACGCACCCCAGAACATTGTC...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCCCCACTGGGTGCAGCTaGAACCCCTCAGGAACTTCC +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASPTGCS*NPSGTS
Trigger: GGAAGTTCCTGAGGGGTTGCAGCTGCACCCAGTGGG...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGAAGTCAAAGGCAGTaGCACAACCCACTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKAGSQRQ*HNPLGA
Trigger: TGCACCCAGTGGGTTGTGGCACTGCCTTTGACTTCC...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCTGGATGAGATTGAACTaGACGTGGGTGAGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: GPDQEWGHMLGAKAGLGTWMRLN*TWVSLF
Trigger: GAACAGGCTCACCCACGTGCAGTTCAATCTCATCCA...GGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTACAGCTGGACCCTTCTaGACCTCCTGCCCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKATAGPF*TSCPFF
Trigger: AAAGAAGGGGCAGGAGGTGCAGAAGGGTCCAGCTGT...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR GCA 90 bp GAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTAGGAGTGGGGTCACATaGTGGGTGCTAAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: EQEGKMLGPDQEWGHMLGRSGVT*WVLRLG
Trigger: GCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCT...ACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCGGACAGCCGTCGTTGTaGGTCCCCGTGCCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVGQPSL*VPVPLQ
Trigger: CTGCAAGGGCACGGGGACCCACAACGACGGCTGTCC...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACAGGACAGCCGTCGTTGTaGGTCCCCGTGCCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTGQPSL*VPVPLQ
Trigger: CTGCAAGGGCACGGGGACCCACAACGACGGCTGTCC...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGGAGGAGGCTCCGTCTaGCATTCTCGATCCCGGACA +
Preference number: 4 (lower is better)
Translates to: EQEGKMLGPDQEWGHMLGGGGSV*HSRSRT
Trigger: TGTCCGGGATCGAGAATGCCAGACGGAGCCTCCTCC...ACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGCGCAATCTCCACAGCTaGACCCTTCTGCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: EGKMLGPDQEWGHMLGAKRNLHS*TLLHLL
Trigger: CAGGAGGTGCAGAAGGGTCCAGCTGTGGAGATTGCG...CTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCGTGCTAAGGCTGGGCTaGGTACCAGGGTCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASVLRLG*VPGSSP
Trigger: AGGGCTTGACCCTGGTACCCAGCCCAGCCTTAGCAC...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCAGTGGGGTCACATGCTaGGTGCTAAGGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASSGVTC*VLRLGW
Trigger: CCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACT...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCATTGAAGACCAAGTCCTaGGGTAAGGTGCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPLKTKS*GKVLGP
Trigger: AGGTCCCAGCACCTTACCCCAGGACTTGGTCTTCAA...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR TCA 90 bp GGTGAGCCTGTTCTTTTTGGCCGCCACAGGCTGGTTGCAGATGGCCTCATACTTCGCCGCTGTTGCTGCTaGACATGTACTCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GEPVLFGRHRLVADGLILRRCCC*TCTQGS
Trigger: GCTTCCCTGAGTACATGTTCAGCAGCAACAGCGGCG...AAGTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAAAAAGAACAGGCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR TCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCCGCCGCTGTTGCTGCTaGACATGTACTCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASRRCCC*TCTQGS
Trigger: GCTTCCCTGAGTACATGTTCAGCAGCAACAGCGGCG...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGACACAGTGTCCACTaGCATGTTGTGGGCGTCATA +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKAGHSVH*HVVGVI
Trigger: TATGACGCCCACAACATGTCAGTGGACACTGTGTCC...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR TCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTAGGGGTAATGGTGGTTaGAGACCAAGTCCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKARGNGG*RPSPGV
Trigger: TACCCCAGGACTTGGTCTTCAACCACCATTACCCCT...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR GCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTTTCAGCTGCCCCAGCTaGAGGCACATCTGTTTGACT +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKAFSCPS*RHICLT
Trigger: AGTCAAACAGATGTGCCTGCAGCTGGGGCAGCTGAA...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCGTCATAGTGGCCTACTaGCACCAGGTAGGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASVIVAY*HQVGVV
Trigger: GACCACCCCTACCTGGTGGCAGTAGGCCACTATGAC...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTCAGGGTCTGAGTGCTTaGCAGACTTGGCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: EQEGKMLGPDQEWGHMLGQGLSA*QTWLSC
Trigger: GCAGCTCAGCCAAGTCTGGCAAGCACTCAGACCCTG...ACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp CCATCTGTGGTGACTGCTGCGAACACAGTAGAAGAGTATGGCGCCCAGGCCACATTCTGCCACTTGACCTaGCACACAGGGTCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: PSVVTAANTVEEYGAQATFCHLT*HTGSEC
Trigger: GCACTCAGACCCTGTGTGGCAGGTCAAGTGGCAGAA...TGTGGCCTGGGCGCCATACTCTTCTACTGTGTTCGCAGCAGTCACCACAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR GCA 90 bp GAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGCAGGAACTTCCGTGGTaGTGCCTTCCACCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: EGKMLGPDQEWGHMLGAKQELPW*CLPPSA
Trigger: AGCTGAAGGTGGAAGGCAGCACCACGGAAGTTCCTG...CTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp TTTGGCATCTTGCGCAAATTGGGTGAGAGCTTGAGGCTGATGATGTGCCCACGGCCACAACCCACTGGGTaGAGCTGCAACCCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: FGILRKLGESLRLMMCPRPQPTG*SCNPSG
Trigger: TCCTGAGGGGTTGCAGCTGCACCCAGTGGGTTGTGG...CCGTGGGCACATCATCAGCCTCAAGCTCTCACCCAATTTGCGCAAGATGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR GCA 90 bp GCCTTCCCATCTGTGGTGACTGCTGCGAACACAGTAGAAGAGTATGGCGCCCAGGGAAGTCAAAGGCAGTaGCACAACCCACTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: AFPSVVTAANTVEEYGAQGSQRQ*HNPLGA
Trigger: TGCACCCAGTGGGTTGTGGCACTGCCTTTGACTTCC...CTGGGCGCCATACTCTTCTACTGTGTTCGCAGCAGTCACCACAGATGGGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR GCA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCACCCATCTGTGGTGACTaGTGCGAACACAGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPPICGD*CEHSRR
Trigger: TCTTCTACTGTGTTCGCAGCAGTCACCACAGATGGG...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR GCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTAGTCCTGGGGTAAGGTaGTGGGACCTTAAGGAACAG +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKASPGVR*WDLKEQ
Trigger: CTGTTCCTTAAGGTCCCAGCACCTTACCCCAGGACT...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCACCCACTGATTGGCTGTaGCTGAAAAGTTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPPTDWL*LKSLSW
Trigger: CCAGGACAAACTTTTCAGCCACAGCCAATCAGTGGG...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GCCTTCCCATCTGTGGTGACTGCTGCGAACACAGTAGAAGAGTATGGCGCCCAGCCTCAGGAACTTCCGTaGTGCTGCCTTCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: AFPSVVTAANTVEEYGAQPQELP*CCLPPS
Trigger: TGAAGGTGGAAGGCAGCACCACGGAAGTTCCTGAGG...CTGGGCGCCATACTCTTCTACTGTGTTCGCAGCAGTCACCACAGATGGGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR CCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCTTGGCCGCCACAGGCTaGTTGCAGATGGCCTCATAC +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASLAATG*LQMASY
Trigger: GTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAA...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCCGCAATCTCCACAGCTaGACCCTTCTGCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASRNLHS*TLLHLL
Trigger: CAGGAGGTGCAGAAGGGTCCAGCTGTGGAGATTGCG...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp ACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGTGCTAAGGCTGGGCTaGGTACCAGGGTCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: TEQEGKMLGPDQEWGHMLVLRLG*VPGSSP
Trigger: AGGGCTTGACCCTGGTACCCAGCCCAGCCTTAGCAC...CAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCGGACCTGATCAGGAGTaGGGTCACATGCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASGPDQE*GHMLGA
Trigger: AGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTTTGAAGACCAAGTCCTaGGGTAAGGTGCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKALKTKS*GKVLGP
Trigger: AGGTCCCAGCACCTTACCCCAGGACTTGGTCTTCAA...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR TCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGTTGTTGTAGGTCTGTaGGGCCCTCTCACTGAAGTT +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKAVVVGL*GPLTEV
Trigger: AACTTCAGTGAGAGGGCCTCACAGACCTACAACAAC...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGAGGGGTAATGGTGGTTaGAGACCAAGTCCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: EGKMLGPDQEWGHMLGAKRGNGG*RPSPGV
Trigger: TACCCCAGGACTTGGTCTTCAACCACCATTACCCCT...CTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR GCA 90 bp ACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGTCATAGTGGCCTACTaGCACCAGGTAGGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: TEQEGKMLGPDQEWGHMLVIVAY*HQVGVV
Trigger: GACCACCCCTACCTGGTGGCAGTAGGCCACTATGAC...CAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp ATCGCCCACAATGATGATGGGGTGGATGAGATTGAACTGCACGTGGGTGAGCCTGTCATAGTGGCCTACTaGCACCAGGTAGGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: IAHNDDGVDEIELHVGEPVIVAY*HQVGVV
Trigger: GACCACCCCTACCTGGTGGCAGTAGGCCACTATGAC...AGGCTCACCCACGTGCAGTTCAATCTCATCCACCCCATCATCATTGTGGGCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR GCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCCACACAGGGTCTGAGTaGTTGCCAGACTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASHTGSE*LPDLAE
Trigger: CTCAGCCAAGTCTGGCAAGCACTCAGACCCTGTGTG...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCCCCACTGGGTGCAGCTaGAACCCCTCAGGAACTTCC +
Preference number: 4 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVPTGCS*NPSGTS
Trigger: GGAAGTTCCTGAGGGGTTGCAGCTGCACCCAGTGGG...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp TATGTGGGCCTTCCCATCTGTGGTGACTGCTGCGAACACAGTAGAAGAGTATGGCCCACTGGGTGCAGCTaGAACCCCTCAGGAACTTCC +
Preference number: 4 (lower is better)
Translates to: YVGLPICGDCCEHSRRVWPTGCS*NPSGTS
Trigger: GGAAGTTCCTGAGGGGTTGCAGCTGCACCCAGTGGG...CCATACTCTTCTACTGTGTTCGCAGCAGTCACCACAGATGGGAAGGCCCACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR GCA 90 bp GACCTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGCCACAACCCACTGGGTaGAGCTGCAACCCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: DLKEQNKKGRCWDLIRSGPQPTG*SCNPSG
Trigger: TCCTGAGGGGTTGCAGCTGCACCCAGTGGGTTGTGG...CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GGTGAGCCTGTTCTTTTTGGCCGCCACAGGCTGGTTGCAGATGGCCTCATACTTCCGCCACAGGCTGGTTaGAGATGGCCTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: GEPVLFGRHRLVADGLILPPQAG*RWPHTC
Trigger: ACAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGG...AAGTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAAAAAGAACAGGCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR GCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCCCCTTCTGCACCTCCTaGCCCTTCTTTTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASPFCTS*PFFSFG
Trigger: GCCAAAGGAAAAGAAGGGGCAGGAGGTGCAGAAGGG...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTACAGCTGGACCCTTCTaGACCTCCTGCCCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: EQEGKMLGPDQEWGHMLGTAGPF*TSCPFF
Trigger: AAAGAAGGGGCAGGAGGTGCAGAAGGGTCCAGCTGT...ACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR GCA 90 bp GAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGAGTCCTGGGGTAAGGTaGTGGGACCTTAAGGAACAG +
Preference number: 4 (lower is better)
Translates to: EGKMLGPDQEWGHMLGAKSPGVR*WDLKEQ
Trigger: CTGTTCCTTAAGGTCCCAGCACCTTACCCCAGGACT...CTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCAAATCATCTCAACCCCTaGAGAGCCTACAAAACGCTC +
Preference number: 4 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPNHLNP*RAYKTL
Trigger: GAGCGTTTTGTAGGCTCTCCAGGGGTTGAGATGATT...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTTACCTGACAATGTTCTaGGGTGCGTGTGGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKAYLTMF*GACGLL
Trigger: CAACAACCCACACGCACCCCAGAACATTGTCAGGTA...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCAGCAGGGTACCCACCTaGTCCCGGTATTCATCAGCA +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASSRVPT*SRYSSA
Trigger: TGCTGATGAATACCGGGACCAGGTGGGTACCCTGCT...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp CCTGTTCTTTTTGGCCGCCACAGGCTGGTTGCAGATGGCCTCATACTTGTTGATCTGCAGAAGGAGGGCTaGGAGTGGGGCTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PVLFGRHRLVADGLILVDLQKEG*EWGFLR
Trigger: CCTCAAGAAGCCCCACTCCCAGCCCTCCTTCTGCAG...ATCAACAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAAAAAGAACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR CCA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACACTGCAGAAGGAGGGCTaGGAGTGGGGCTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTLQKEG*EWGFLR
Trigger: CCTCAAGAAGCCCCACTCCCAGCCCTCCTTCTGCAG...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp CTTGAGGCTGATGATGTGCCCACGGTCATCGCCCACAATGATGATGGGGTGGATAGTGCTTGCCAGACTTaGCTGAGCTGCAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LEADDVPTVIAHNDDGVDSACQT*LSCRRR
Trigger: CCTCCTTCTGCAGCTCAGCCAAGTCTGGCAAGCACT...ATCCACCCCATCATCATTGTGGGCGATGACCGTGGGCACATCATCAGCCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR CCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCCCTCAGGAACTTCCGTaGTGCTGCCTTCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASPQELP*CCLPPS
Trigger: TGAAGGTGGAAGGCAGCACCACGGAAGTTCCTGAGG...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GATGATGTGCCCACGGTCATCGCCCACAATGATGATGGGGTGGATGAGATTGAAAGTGCCACAACCCACTaGGTGCAGCTGCAACCCCTC +
Preference number: 4 (lower is better)
Translates to: DDVPTVIAHNDDGVDEIESATTH*VQLQPL
Trigger: GAGGGGTTGCAGCTGCACCCAGTGGGTTGTGGCACT...TTCAATCTCATCCACCCCATCATCATTGTGGGCGATGACCGTGGGCACATCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR CCA 90 bp GAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGACCTTGGTGTGGTATaGGTTCCAGGACACAGTGTC +
Preference number: 4 (lower is better)
Translates to: EGKMLGPDQEWGHMLGAKDLGVV*VPGHSV
Trigger: GACACTGTGTCCTGGAACCCATACCACACCAAGGTC...CTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCCACAGTAGAAGAGTATaGCGCCCAGGCCACATCACC +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASHSRRV*RPGHIT
Trigger: GGTGATGTGGCCTGGGCGCCATACTCTTCTACTGTG...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCACCCCTTCTTTTCCTTTaGCATCTTGCGCAAATTGGG +
Preference number: 4 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPPLLFL*HLAQIG
Trigger: CCCAATTTGCGCAAGATGCCAAAGGAAAAGAAGGGG...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACCGCAATCTCCACAGCTaGACCCTTCTGCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDRNLHS*TLLHLL
Trigger: CAGGAGGTGCAGAAGGGTCCAGCTGTGGAGATTGCG...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GACCTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGAGTGGGGTCACATGCTaGGTGCTAAGGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DLKEQNKKGRCWDLIRSGSGVTC*VLRLGW
Trigger: CCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACT...CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACGGACCTGATCAGGAGTaGGGTCACATGCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDGPDQE*GHMLGA
Trigger: AGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGAAGAAGGGAAGATGCTaGGACCTGATCAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: EGKMLGPDQEWGHMLGAKKKGRC*DLIRSG
Trigger: CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTT...CTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR TCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTAAACGCTCCCTCGTCTaGAGACAAAAAGTTTGTCCG +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKAKRSLV*RQKVCP
Trigger: CGGACAAACTTTTTGTCTTCAGACGAGGGAGCGTTT...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTCTGATGCTCTGCTTATaGGGCTGTTTATGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: EQEGKMLGPDQEWGHMLGLMLCL*GCLWGA
Trigger: GGCTCCCCATAAACAGCCTCATAAGCAGAGCATCAG...ACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTTCCCACTTCAGTCCCTaGATCTTCATCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKASHFSP*IFISLP
Trigger: AGGAAGAGAGATGAAGATTCAGGGACTGAAGTGGGA...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTCTGTCAAAATCCGAGTaGACTCCTCCTTTAACTCCG +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKALSKSE*TPPLTP
Trigger: CGGAGTTAAAGGAGGAGTTCACTCGGATTTTGACAG...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp ACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGCCGCCGTCCTTCATCTaGGTCTTTGGGGATCAGGTT +
Preference number: 4 (lower is better)
Translates to: TEQEGKMLGPDQEWGHMLPPSFI*VFGDQV
Trigger: AACCTGATCCCCAAAGACTCAGATGAAGGACGGCGG...CAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCCATCCTTCTGCCACTTaGCCTGCCACACAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVHPSAT*PATQGL
Trigger: CAGACCCTGTGTGGCAGGTCAAGTGGCAGAAGGATG...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GACCTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGCATCCTTCTGCCACTTaGCCTGCCACACAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: DLKEQNKKGRCWDLIRSGHPSAT*PATQGL
Trigger: CAGACCCTGTGTGGCAGGTCAAGTGGCAGAAGGATG...CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCTTGATGACATCTATGTaGACCAGCTTTCTCTTCACG +
Preference number: 4 (lower is better)
Translates to: GPDQEWGHMLGAKAGLGTLMTSM*TSFLFT
Trigger: CGTGAAGAGAAAGCTGGTTCACATAGATGTCATCAA...GGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGCACATCACCCACGGCTaGGTTCAGGTCATAGATGAA +
Preference number: 4 (lower is better)
Translates to: EGKMLGPDQEWGHMLGAKHITHG*VQVIDE
Trigger: TTCATCTATGACCTGAACTCAGCCGTGGGTGATGTG...CTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR TCA 90 bp GCCTTCCCATCTGTGGTGACTGCTGCGAACACAGTAGAAGAGTATGGCGCCCAGCACATCACCCACGGCTaGGTTCAGGTCATAGATGAA +
Preference number: 4 (lower is better)
Translates to: AFPSVVTAANTVEEYGAQHITHG*VQVIDE
Trigger: TTCATCTATGACCTGAACTCAGCCGTGGGTGATGTG...CTGGGCGCCATACTCTTCTACTGTGTTCGCAGCAGTCACCACAGATGGGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR TCA 90 bp GAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGCTTGCGCAAATTGGGTaGGAGCTTGAGGCTGATGAT +
Preference number: 4 (lower is better)
Translates to: EGKMLGPDQEWGHMLGAKLAQIG*ELEADD
Trigger: ATCATCAGCCTCAAGCTCTCACCCAATTTGCGCAAG...CTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGACAATGTTCTGGGGTaGGTGTGGGTTGTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: EQEGKMLGPDQEWGHMLGDNVLG*VWVVGC
Trigger: ACAGCCAACAACCCACACGCACCCCAGAACATTGTC...ACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp ATCGCCCACAATGATGATGGGGTGGATGAGATTGAACTGCACGTGGGTGAGCCTCACACAGGGTCTGAGTaGTTGCCAGACTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: IAHNDDGVDEIELHVGEPHTGSE*LPDLAE
Trigger: CTCAGCCAAGTCTGGCAAGCACTCAGACCCTGTGTG...AGGCTCACCCACGTGCAGTTCAATCTCATCCACCCCATCATCATTGTGGGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR GCA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTTCTGCCACTTGACCTaGCACACAGGGTCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDFCHLT*HTGSEC
Trigger: GCACTCAGACCCTGTGTGGCAGGTCAAGTGGCAGAA...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGTCCATGTCATCCTTCTaGCACTTGACCTGCCACACA +
Preference number: 4 (lower is better)
Translates to: EGKMLGPDQEWGHMLGAKSMSSF*HLTCHT
Trigger: TGTGTGGCAGGTCAAGTGGCAGAAGGATGACATGGA...CTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp AGCCTGTTCTTTTTGGCCGCCACAGGCTGGTTGCAGATGGCCTCATACTTGTTGCAGGAACTTCCGTGGTaGTGCCTTCCACCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SLFFLAATGWLQMASYLLQELPW*CLPPSA
Trigger: AGCTGAAGGTGGAAGGCAGCACCACGGAAGTTCCTG...CAACAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAAAAAGAACAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR GCA 90 bp ACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGAAGTCAAAGGCAGTaGCACAACCCACTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: TEQEGKMLGPDQEWGHMLGSQRQ*HNPLGA
Trigger: TGCACCCAGTGGGTTGTGGCACTGCCTTTGACTTCC...CAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCATTTTTCCCTCCTCTGTaGCCACTAGGAACATGTAGT +
Preference number: 4 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPFFPPL*PLGTCS
Trigger: ACTACATGTTCCTAGTGGGCACAGAGGAGGGAAAAA...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR GCA 90 bp GAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGCCCATCTGTGGTGACTaGTGCGAACACAGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: EGKMLGPDQEWGHMLGAKPICGD*CEHSRR
Trigger: TCTTCTACTGTGTTCGCAGCAGTCACCACAGATGGG...CTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR GCA 90 bp CCATCTGTGGTGACTGCTGCGAACACAGTAGAAGAGTATGGCGCCCAGGCCACATGGATGAGATTGAACTaGACGTGGGTGAGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: PSVVTAANTVEEYGAQATWMRLN*TWVSLF
Trigger: GAACAGGCTCACCCACGTGCAGTTCAATCTCATCCA...TGTGGCCTGGGCGCCATACTCTTCTACTGTGTTCGCAGCAGTCACCACAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR GCA 90 bp ATCTTGCGCAAATTGGGTGAGAGCTTGAGGCTGATGATGTGCCCACGGTCATCGTTGAGGCTGATGATGTaGCCACGGTCATCGCCCACA +
Preference number: 4 (lower is better)
Translates to: ILRKLGESLRLMMCPRSSLRLMM*PRSSPT
Trigger: TGTGGGCGATGACCGTGGGCACATCATCAGCCTCAA...CGATGACCGTGGGCACATCATCAGCCTCAAGCTCTCACCCAATTTGCGCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR GCA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACACAGCTGGACCCTTCTaGACCTCCTGCCCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDTAGPF*TSCPFF
Trigger: AAAGAAGGGGCAGGAGGTGCAGAAGGGTCCAGCTGT...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCTCATCATATGTATTCTaGTTGACCATCCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: GPDQEWGHMLGAKAGLGTSSYVF*LTIRSM
Trigger: CATGGAGCGGATGGTCAACCAGAATACATATGATGA...GGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACAGCAGGGTACCCACCTaGTCCCGGTATTCATCAGCA +
Preference number: 4 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDSRVPT*SRYSSA
Trigger: TGCTGATGAATACCGGGACCAGGTGGGTACCCTGCT...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGCAGATCCCTGTACTTTaGATTCCAGCAGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: EGKMLGPDQEWGHMLGAKQIPVL*IPAEGS
Trigger: ACTGCCCTCTGCTGGAATCCAAAGTACAGGGATCTG...CTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp CCATCTGTGGTGACTGCTGCGAACACAGTAGAAGAGTATGGCGCCCAGGCCACATGTACTCAGGGAAGCTaGGGTTCTTCAGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: PSVVTAANTVEEYGAQATCTQGS*GSSGCR
Trigger: TCTACAGCCTGAAGAACCCCAGCTTCCCTGAGTACA...TGTGGCCTGGGCGCCATACTCTTCTACTGTGTTCGCAGCAGTCACCACAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR CCA 90 bp ACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGAGTGCTTGCCAGACTTaGCTGAGCTGCAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: TEQEGKMLGPDQEWGHMLSACQT*LSCRRR
Trigger: CCTCCTTCTGCAGCTCAGCCAAGTCTGGCAAGCACT...CAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTATGAAGACCTTGGTGTaGTATGGGTTCCAGGACACA +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKAMKTLV*YGFQDT
Trigger: TGTGTCCTGGAACCCATACCACACCAAGGTCTTCAT...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCGGGGTCTTGATGGTGTaGTCCCAGATCTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASGVLMV*SQIFTV
Trigger: GACAGTGAAGATCTGGGACCACACCATCAAGACCCC...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp CTGATGATGTGCCCACGGTCATCGCCCACAATGATGATGGGGTGGATGAGATTGCACAGTAGAAGAGTATaGCGCCCAGGCCACATCACC +
Preference number: 4 (lower is better)
Translates to: LMMCPRSSPTMMMGWMRLHSRRV*RPGHIT
Trigger: GGTGATGTGGCCTGGGCGCCATACTCTTCTACTGTG...CAATCTCATCCACCCCATCATCATTGTGGGCGATGACCGTGGGCACATCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR CCA 90 bp TATGTGGGCCTTCCCATCTGTGGTGACTGCTGCGAACACAGTAGAAGAGTATGGTTGGCCGCCACAGGCTaGTTGCAGATGGCCTCATAC +
Preference number: 4 (lower is better)
Translates to: YVGLPICGDCCEHSRRVWLAATG*LQMASY
Trigger: GTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAA...CCATACTCTTCTACTGTGTTCGCAGCAGTCACCACAGATGGGAAGGCCCACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
3UTR CAA 72 bp ATGAGATTGAACTGCACGTGGGTGAGCCTGTTCTTTTaGGCCGCCACAGGCTGGTTGCAGATGGCCTCATAC +
Preference number: 4 (lower is better)
Translates to: MRLNCTWVSLFF*AATGWLQMASY
Trigger: GTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAAAAAGAACAGGCTCACCCACGTGCAGTTCAATCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR TCA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACACCGCCGTCCTTCATCTaGGTCTTTGGGGATCAGGTT +
Preference number: 4 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTPPSFI*VFGDQV
Trigger: AACCTGATCCCCAAAGACTCAGATGAAGGACGGCGG...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTCCCGGCTCTGCTTCATaGAGTCATAAGAGCCATATC +
Preference number: 4 (lower is better)
Translates to: EQEGKMLGPDQEWGHMLGPGSAS*SHKSHI
Trigger: GATATGGCTCTTATGACTTCATGAAGCAGAGCCGGG...ACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp CCTGTTCTTTTTGGCCGCCACAGGCTGGTTGCAGATGGCCTCATACTTGTTGATGGGAGTGGGGCTTCTTaGGGTTGTAAATGGCCACGT +
Preference number: 4 (lower is better)
Translates to: PVLFGRHRLVADGLILVDGSGAS*GCKWPR
Trigger: ACGTGGCCATTTACAACCTCAAGAAGCCCCACTCCC...ATCAACAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAAAAAGAACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR TCA 90 bp GGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCTGGCCTCATACTTGTTaGTGGCTAAGTCAAATATGT +
Preference number: 4 (lower is better)
Translates to: GPDQEWGHMLGAKAGLGTWPHTC*WLSQIC
Trigger: ACATATTTGACTTAGCCATCAACAAGTATGAGGCCA...GGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GACCTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGAAGATGCTGGGACCTaGTCAGGAGTGGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: DLKEQNKKGRCWDLIRSGEDAGT*SGVGSH
Trigger: ATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTC...CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR GCA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCGGGCCCATTCATCTGTaGCTTCTCCCACTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVGPIHL*LLPLQS
Trigger: GGACTGAAGTGGGAGAAGGCACAGATGAATGGGCCC...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTTCAGCTGCCCCAGCTaGAGGCACATCTGTTTGACT +
Preference number: 4 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDFSCPS*RHICLT
Trigger: AGTCAAACAGATGTGCCTGCAGCTGGGGCAGCTGAA...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACAGTCACTTTTTCAGCTaGCCCAGCTGCAGGCACATC +
Preference number: 4 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDSHFFS*PSCRHI
Trigger: GATGTGCCTGCAGCTGGGGCAGCTGAAAAAGTGACT...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GTCAAATATGTGGGCCTTCCCATCTGTGGTGACTGCTGCGAACACAGTAGAAGACAGGGTCTGAGTGCTTaGCAGACTTGGCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VKYVGLPICGDCCEHSRRQGLSA*QTWLSC
Trigger: GCAGCTCAGCCAAGTCTGGCAAGCACTCAGACCCTG...TCTTCTACTGTGTTCGCAGCAGTCACCACAGATGGGAAGGCCCACATATTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR GCA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCTTCTGCCACTTGACCTaGCACACAGGGTCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVFCHLT*HTGSEC
Trigger: GCACTCAGACCCTGTGTGGCAGGTCAAGTGGCAGAA...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp CCCACGGTCATCGCCCACAATGATGATGGGGTGGATGAGATTGAACTGCACGTGTCCATGTCATCCTTCTaGCACTTGACCTGCCACACA +
Preference number: 4 (lower is better)
Translates to: PTVIAHNDDGVDEIELHVSMSSF*HLTCHT
Trigger: TGTGTGGCAGGTCAAGTGGCAGAAGGATGACATGGA...CACGTGCAGTTCAATCTCATCCACCCCATCATCATTGTGGGCGATGACCGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR GCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTATCTGTGGTGACTGCTaGGAACACAGTAGAAGAGTA +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKAICGDC*EHSRRV
Trigger: TACTCTTCTACTGTGTTCGCAGCAGTCACCACAGAT...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR GCA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACACCGCCACAGGCTGGTTaGAGATGGCCTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTPPQAG*RWPHTC
Trigger: ACAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGG...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GACCTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGTTGAGGCTGATGATGTaGCCACGGTCATCGCCCACA +
Preference number: 4 (lower is better)
Translates to: DLKEQNKKGRCWDLIRSGLRLMM*PRSSPT
Trigger: TGTGGGCGATGACCGTGGGCACATCATCAGCCTCAA...CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTTTTCCTTTGGCATCTTaGGCAAATTGGGTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKAFPLAS*ANWVRA
Trigger: AGCTCTCACCCAATTTGCGCAAGATGCCAAAGGAAA...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCTCGGTCAACTCCAGCTaGTCAGGGGGTCTAACTGTG +
Preference number: 4 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVSVNSS*SGGLTV
Trigger: CACAGTTAGACCCCCTGACCAGCTGGAGTTGACCGA...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGTTCTGGGGTGCGTGTaGGTTGTTGGCTGTCAAAAT +
Preference number: 4 (lower is better)
Translates to: EQEGKMLGPDQEWGHMLGVLGCV*VVGCQN
Trigger: ATTTTGACAGCCAACAACCCACACGCACCCCAGAAC...ACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACACTGAAAAGTTTGTCCTaGGAGGAGGCTCCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTLKSLS*EEAPSG
Trigger: GCCAGACGGAGCCTCCTCCCAGGACAAACTTTTCAG...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GACCTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGAGTGCTTGCCAGACTTaGCTGAGCTGCAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: DLKEQNKKGRCWDLIRSGSACQT*LSCRRR
Trigger: CCTCCTTCTGCAGCTCAGCCAAGTCTGGCAAGCACT...CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACACCTCAGGAACTTCCGTaGTGCTGCCTTCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTPQELP*CCLPPS
Trigger: TGAAGGTGGAAGGCAGCACCACGGAAGTTCCTGAGG...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACGACCTTGGTGTGGTATaGGTTCCAGGACACAGTGTC +
Preference number: 4 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDDLGVV*VPGHSV
Trigger: GACACTGTGTCCTGGAACCCATACCACACCAAGGTC...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCCACAGTAGAAGAGTATaGCGCCCAGGCCACATCACC +
Preference number: 4 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVHSRRV*RPGHIT
Trigger: GGTGATGTGGCCTGGGCGCCATACTCTTCTACTGTG...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR TCA 90 bp ACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGTTCCTCTGCCTATGCTaGTGCTCTGCTTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: TEQEGKMLGPDQEWGHMLFLCLC*CSAYEA
Trigger: AGCCTCATAAGCAGAGCATCAGCATAGGCAGAGGAA...CAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGTTTCTGAAATCACCTTaGCAGACTCCTGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: EGKMLGPDQEWGHMLGAKFLKSP*QTPENL
Trigger: CAGGTTCTCAGGAGTCTGTCAAGGTGATTTCAGAAA...CTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242317.9
CDS-3UTR TCA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACACTGATTGGCTGTGGCTaGAAAGTTTGTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTLIGCG*KVCPGR
Trigger: CCTCCCAGGACAAACTTTTCAGCCACAGCCAATCAG...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACAGGACACAGTGTCCACTaGCATGTTGTGGGCGTCATA +
Preference number: 4 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTGHSVH*HVVGVI
Trigger: TATGACGCCCACAACATGTCAGTGGACACTGTGTCC...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR TCA 90 bp AGCCTGTTCTTTTTGGCCGCCACAGGCTGGTTGCAGATGGCCTCATACTTGTTGCTTGCGCAAATTGGGTaGGAGCTTGAGGCTGATGAT +
Preference number: 4 (lower is better)
Translates to: SLFFLAATGWLQMASYLLLAQIG*ELEADD
Trigger: ATCATCAGCCTCAAGCTCTCACCCAATTTGCGCAAG...CAACAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAAAAAGAACAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR TCA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACAAGGGGTAATGGTGGTTaGAGACCAAGTCCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTRGNGG*RPSPGV
Trigger: TACCCCAGGACTTGGTCTTCAACCACCATTACCCCT...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR TCA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTTTTCTGAAATCACCTTaGCAGACTCCTGAGAACCTT +
Preference number: 4 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKAFLKSP*QTPENL
Trigger: AAGGTTCTCAGGAGTCTGTCAAGGTGATTTCAGAAA...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614641.4
CDS-3UTR GCA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCAGTCACTTTTTCAGCTaGCCCAGCTGCAGGCACATC +
Preference number: 4 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVSHFFS*PSCRHI
Trigger: GATGTGCCTGCAGCTGGGGCAGCTGAAAAAGTGACT...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGTAAATGGCCACGTTaGCGTCATAGTGGCCTACTG +
Preference number: 4 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDCKWPR*RHSGLL
Trigger: CAGTAGGCCACTATGACGGCAACGTGGCCATTTACA...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCAACAAGAAGGGAAGATaGTGGGACCTGATCAGGAGT +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASNKKGR*WDLIRS
Trigger: ACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTT...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR GCA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCAGTCCTGGGGTAAGGTaGTGGGACCTTAAGGAACAG +
Preference number: 4 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVSPGVR*WDLKEQ
Trigger: CTGTTCCTTAAGGTCCCAGCACCTTACCCCAGGACT...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCCTTCATCTGAGTCTTTaGGGATCAGGTTCCCAACCT +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASLHLSL*GSGSQP
Trigger: AGGTTGGGAACCTGATCCCCAAAGACTCAGATGAAG...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACCCCACTGATTGGCTGTaGCTGAAAAGTTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDPTDWL*LKSLSW
Trigger: CCAGGACAAACTTTTCAGCCACAGCCAATCAGTGGG...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCATGAAGACCTTGGTGTaGTATGGGTTCCAGGACACA +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASMKTLV*YGFQDT
Trigger: TGTGTCCTGGAACCCATACCACACCAAGGTCTTCAT...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCGGGGTCTTGATGGTGTaGTCCCAGATCTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVGVLMV*SQIFTV
Trigger: GACAGTGAAGATCTGGGACCACACCATCAAGACCCC...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GACCTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGAAGAAGGGAAGATGCTaGGACCTGATCAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: DLKEQNKKGRCWDLIRSGKKGRC*DLIRSG
Trigger: CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTT...CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCCCTGGGGTAAGGTGCTaGGACCTTAAGGAACAGAAC +
Preference number: 4 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVPGVRC*DLKEQN
Trigger: GTTCTGTTCCTTAAGGTCCCAGCACCTTACCCCAGG...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCTTGAAGACCAAGTCCTaGGGTAAGGTGCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVLKTKS*GKVLGP
Trigger: AGGTCCCAGCACCTTACCCCAGGACTTGGTCTTCAA...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR TCA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCCCCGGCTCTGCTTCATaGAGTCATAAGAGCCATATC +
Preference number: 4 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVPGSAS*SHKSHI
Trigger: GATATGGCTCTTATGACTTCATGAAGCAGAGCCGGG...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCAATCCTGCCGTCAGATaGCACAGAGAAGAAGTTAAG +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASNPAVR*HREEVK
Trigger: CTTAACTTCTTCTCTGTGTCATCTGACGGCAGGATT...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GACCTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGCACATCACCCACGGCTaGGTTCAGGTCATAGATGAA +
Preference number: 4 (lower is better)
Translates to: DLKEQNKKGRCWDLIRSGHITHG*VQVIDE
Trigger: TTCATCTATGACCTGAACTCAGCCGTGGGTGATGTG...CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR GCA 90 bp GACCTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGCTGGGTGTAGTGAACTaGCAGTTGGTTCACAAAGCC +
Preference number: 4 (lower is better)
Translates to: DLKEQNKKGRCWDLIRSGLGVVN*QLVHKA
Trigger: GGCTTTGTGAACCAACTGGCAGTTCACTACACCCAG...CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTAGAGCCATATCCCACTaGAAACAGATCCCTGTACTT +
Preference number: 4 (lower is better)
Translates to: EQEGKMLGPDQEWGHMLGRAISH*KQIPVL
Trigger: AAGTACAGGGATCTGTTTGCAGTGGGATATGGCTCT...ACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp TATGTGGGCCTTCCCATCTGTGGTGACTGCTGCGAACACAGTAGAAGAGTATGGTGTAAATGGCCACGTTaGCGTCATAGTGGCCTACTG +
Preference number: 4 (lower is better)
Translates to: YVGLPICGDCCEHSRRVWCKWPR*RHSGLL
Trigger: CAGTAGGCCACTATGACGGCAACGTGGCCATTTACA...CCATACTCTTCTACTGTGTTCGCAGCAGTCACCACAGATGGGAAGGCCCACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR GCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCATCTGTGGTGACTGCTaGGAACACAGTAGAAGAGTA +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASICGDC*EHSRRV
Trigger: TACTCTTCTACTGTGTTCGCAGCAGTCACCACAGAT...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR GCA 90 bp TATGTGGGCCTTCCCATCTGTGGTGACTGCTGCGAACACAGTAGAAGAGTATGGCCCATCTGTGGTGACTaGTGCGAACACAGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: YVGLPICGDCCEHSRRVWPICGD*CEHSRR
Trigger: TCTTCTACTGTGTTCGCAGCAGTCACCACAGATGGG...CCATACTCTTCTACTGTGTTCGCAGCAGTCACCACAGATGGGAAGGCCCACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR GCA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACAACAAGAAGGGAAGATaGTGGGACCTGATCAGGAGT +
Preference number: 4 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDNKKGR*WDLIRS
Trigger: ACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTT...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGTCATCATATGTATTCTaGTTGACCATCCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: EGKMLGPDQEWGHMLGAKSSYVF*LTIRSM
Trigger: CATGGAGCGGATGGTCAACCAGAATACATATGATGA...CTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCCAGATCCCTGTACTTTaGATTCCAGCAGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVQIPVL*IPAEGS
Trigger: ACTGCCCTCTGCTGGAATCCAAAGTACAGGGATCTG...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCTGTACTCAGGGAAGCTaGGGTTCTTCAGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVCTQGS*GSSGCR
Trigger: TCTACAGCCTGAAGAACCCCAGCTTCCCTGAGTACA...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACATGAAGACCTTGGTGTaGTATGGGTTCCAGGACACA +
Preference number: 4 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDMKTLV*YGFQDT
Trigger: TGTGTCCTGGAACCCATACCACACCAAGGTCTTCAT...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACGCTAAGTCAAATATGTaGGCCTTCCCATCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDAKSNM*AFPSVV
Trigger: CACCACAGATGGGAAGGCCCACATATTTGACTTAGC...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GTGAGCCTGTTCTTTTTGGCCGCCACAGGCTGGTTGCAGATGGCCTCATACTTGAGATTGAACTGCACGTaGGTGAGCCTGTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: VSLFFLAATGWLQMASYLRLNCT*VSLFFL
Trigger: CAAAAAGAACAGGCTCACCCACGTGCAGTTCAATCT...CAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAAAAAGAACAGGCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR CCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCAGATTGAACTGCACGTaGGTGAGCCTGTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASRLNCT*VSLFFL
Trigger: CAAAAAGAACAGGCTCACCCACGTGCAGTTCAATCT...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GGTGAGCCTGTTCTTTTTGGCCGCCACAGGCTGGTTGCAGATGGCCTCATACTTACAATGATGATGGGGTaGATGAGATTGAACTGCACG +
Preference number: 4 (lower is better)
Translates to: GEPVLFGRHRLVADGLILTMMMG*MRLNCT
Trigger: CGTGCAGTTCAATCTCATCCACCCCATCATCATTGT...AAGTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAAAAAGAACAGGCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR TCA 90 bp GACCTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGAAACGCTCCCTCGTCTaGAGACAAAAAGTTTGTCCG +
Preference number: 4 (lower is better)
Translates to: DLKEQNKKGRCWDLIRSGKRSLV*RQKVCP
Trigger: CGGACAAACTTTTTGTCTTCAGACGAGGGAGCGTTT...CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATCCCACTTCAGTCCCTaGATCTTCATCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTSHFSP*IFISLP
Trigger: AGGAAGAGAGATGAAGATTCAGGGACTGAAGTGGGA...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACTCCAGCAGAGGGCAGTaGCGGACAGGCGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDSSRGQ*RTGAWL
Trigger: AAGCCAAGCGCCTGTCCGTCACTGCCCTCTGCTGGA...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp ATCGCCCACAATGATGATGGGGTGGATGAGATTGAACTGCACGTGGGTGAGCCTAATCCTGCCGTCAGATaGCACAGAGAAGAAGTTAAG +
Preference number: 4 (lower is better)
Translates to: IAHNDDGVDEIELHVGEPNPAVR*HREEVK
Trigger: CTTAACTTCTTCTCTGTGTCATCTGACGGCAGGATT...AGGCTCACCCACGTGCAGTTCAATCTCATCCACCCCATCATCATTGTGGGCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR TCA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCTTGATGACATCTATGTaGACCAGCTTTCTCTTCACG +
Preference number: 4 (lower is better)
Translates to: GQALGVLYSSDGTETEASLMTSM*TSFLFT
Trigger: CGTGAAGAGAAAGCTGGTTCACATAGATGTCATCAA...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GTGAGCCTGTTCTTTTTGGCCGCCACAGGCTGGTTGCAGATGGCCTCATACTTGTTGATGACATCTATGTaGACCAGCTTTCTCTTCACG +
Preference number: 4 (lower is better)
Translates to: VSLFFLAATGWLQMASYLLMTSM*TSFLFT
Trigger: CGTGAAGAGAAAGCTGGTTCACATAGATGTCATCAA...CAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAAAAAGAACAGGCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR TCA 90 bp CCATCTGTGGTGACTGCTGCGAACACAGTAGAAGAGTATGGCGCCCAGGCCACATGGCCTCATACTTGTTaGTGGCTAAGTCAAATATGT +
Preference number: 4 (lower is better)
Translates to: PSVVTAANTVEEYGAQATWPHTC*WLSQIC
Trigger: ACATATTTGACTTAGCCATCAACAAGTATGAGGCCA...TGTGGCCTGGGCGCCATACTCTTCTACTGTGTTCGCAGCAGTCACCACAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR GCA 90 bp TTTGGCATCTTGCGCAAATTGGGTGAGAGCTTGAGGCTGATGATGTGCCCACGGATCTGTGGTGACTGCTaGGAACACAGTAGAAGAGTA +
Preference number: 4 (lower is better)
Translates to: FGILRKLGESLRLMMCPRICGDC*EHSRRV
Trigger: TACTCTTCTACTGTGTTCGCAGCAGTCACCACAGAT...CCGTGGGCACATCATCAGCCTCAAGCTCTCACCCAATTTGCGCAAGATGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR GCA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACATCTGTGGTGACTGCTaGGAACACAGTAGAAGAGTA +
Preference number: 4 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDICGDC*EHSRRV
Trigger: TACTCTTCTACTGTGTTCGCAGCAGTCACCACAGAT...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp GAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTCACACACAAGAAATCTaGACTCTCTTCCACTTCAGT +
Preference number: 4 (lower is better)
Translates to: EQEGKMLGPDQEWGHMLGHTQEI*TLFHFS
Trigger: ACTGAAGTGGAAGAGAGTCCAGATTTCTTGTGTGTG...ACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GACCTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGCTTCATCTGAGTCTTTaGGGATCAGGTTCCCAACCT +
Preference number: 4 (lower is better)
Translates to: DLKEQNKKGRCWDLIRSGLHLSL*GSGSQP
Trigger: AGGTTGGGAACCTGATCCCCAAAGACTCAGATGAAG...CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp TATGTGGGCCTTCCCATCTGTGGTGACTGCTGCGAACACAGTAGAAGAGTATGGGCTAAGTCAAATATGTaGGCCTTCCCATCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: YVGLPICGDCCEHSRRVWAKSNM*AFPSVV
Trigger: CACCACAGATGGGAAGGCCCACATATTTGACTTAGC...CCATACTCTTCTACTGTGTTCGCAGCAGTCACCACAGATGGGAAGGCCCACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR CCA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACAGCTAAGTCAAATATGTaGGCCTTCCCATCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTAKSNM*AFPSVV
Trigger: CACCACAGATGGGAAGGCCCACATATTTGACTTAGC...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCCCCCTTCTTTTCCTTTaGCATCTTGCGCAAATTGGG +
Preference number: 4 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVPLLFL*HLAQIG
Trigger: CCCAATTTGCGCAAGATGCCAAAGGAAAAGAAGGGG...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCAATCCTGCCGTCAGATaGCACAGAGAAGAAGTTAAG +
Preference number: 4 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVNPAVR*HREEVK
Trigger: CTTAACTTCTTCTCTGTGTCATCTGACGGCAGGATT...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTTTCTCTCCTTGGGCTaGTTAGGAGTCATCAATTCT +
Preference number: 4 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDFLSLG*LGVINS
Trigger: AGAATTGATGACTCCTAAGCAGCCCAAGGAGAGAAA...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCAGAGCCATATCCCACTaGAAACAGATCCCTGTACTT +
Preference number: 4 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVRAISH*KQIPVL
Trigger: AAGTACAGGGATCTGTTTGCAGTGGGATATGGCTCT...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GACCTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGTTTTTCCCTCCTCTGTaGCCACTAGGAACATGTAGT +
Preference number: 4 (lower is better)
Translates to: DLKEQNKKGRCWDLIRSGFFPPL*PLGTCS
Trigger: ACTACATGTTCCTAGTGGGCACAGAGGAGGGAAAAA...CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR GCA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACAGGAGTGGGGTCACATaGTGGGTGCTAAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDRSGVT*WVLRLG
Trigger: GCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCT...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACCACACACAAGAAATCTaGACTCTCTTCCACTTCAGT +
Preference number: 4 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDHTQEI*TLFHFS
Trigger: ACTGAAGTGGAAGAGAGTCCAGATTTCTTGTGTGTG...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTCACTGAAGTTGAACTaGTTAGTGAGCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDSLKLN*LVSFLS
Trigger: GGAGAGAAAGCTCACTAACCAGTTCAACTTCAGTGA...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GTGAGCCTGTTCTTTTTGGCCGCCACAGGCTGGTTGCAGATGGCCTCATACTTGAAGAAGTTAAGGTTTTaGTCCATGTCATCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VSLFFLAATGWLQMASYLKKLRF*SMSSFC
Trigger: GCAGAAGGATGACATGGACCAAAACCTTAACTTCTT...CAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAAAAAGAACAGGCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR CCA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACAGTGCCACAACCCACTaGGTGCAGCTGCAACCCCTC +
Preference number: 4 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDSATTH*VQLQPL
Trigger: GAGGGGTTGCAGCTGCACCCAGTGGGTTGTGGCACT...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACAAGATTGAACTGCACGTaGGTGAGCCTGTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTRLNCT*VSLFFL
Trigger: CAAAAAGAACAGGCTCACCCACGTGCAGTTCAATCT...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACAACAATGATGATGGGGTaGATGAGATTGAACTGCACG +
Preference number: 4 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTTMMMG*MRLNCT
Trigger: CGTGCAGTTCAATCTCATCCACCCCATCATCATTGT...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGTGCTAAGGCTGGGCTaGGTACCAGGGTCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVEVLRLG*VPGSSP
Trigger: AGGGCTTGACCCTGGTACCCAGCCCAGCCTTAGCAC...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CCA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAAGTGGGGTCACATGCTaGGTGCTAAGGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVESGVTC*VLRLGW
Trigger: CCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACT...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR GCA 90 bp GTCAAATATGTGGGCCTTCCCATCTGTGGTGACTGCTGCGAACACAGTAGAAGATTTTTCCCTCCTCTGTaGCCACTAGGAACATGTAGT +
Preference number: 4 (lower is better)
Translates to: VKYVGLPICGDCCEHSRRFFPPL*PLGTCS
Trigger: ACTACATGTTCCTAGTGGGCACAGAGGAGGGAAAAA...TCTTCTACTGTGTTCGCAGCAGTCACCACAGATGGGAAGGCCCACATATTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR TCA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGGGAGTGGGGCTTCTTaGGGTTGTAAATGGCCACGT +
Preference number: 4 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVEGSGAS*GCKWPR
Trigger: ACGTGGCCATTTACAACCTCAAGAAGCCCCACTCCC...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACGGGAGTGGGGCTTCTTaGGGTTGTAAATGGCCACGT +
Preference number: 4 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDGSGAS*GCKWPR
Trigger: ACGTGGCCATTTACAACCTCAAGAAGCCCCACTCCC...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACTTGAGGCTGATGATGTaGCCACGGTCATCGCCCACA +
Preference number: 4 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDLRLMM*PRSSPT
Trigger: TGTGGGCGATGACCGTGGGCACATCATCAGCCTCAA...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACAAAGAAGTTAAGGTTTTaGTCCATGTCATCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTKKLRF*SMSSFC
Trigger: GCAGAAGGATGACATGGACCAAAACCTTAACTTCTT...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACTTCCTCTGCCTATGCTaGTGCTCTGCTTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDFLCLC*CSAYEA
Trigger: AGCCTCATAAGCAGAGCATCAGCATAGGCAGAGGAA...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGTTGTTGTAGGTCTGTaGGGCCCTCTCACTGAAGTT +
Preference number: 4 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVEVVVGL*GPLTEV
Trigger: AACTTCAGTGAGAGGGCCTCACAGACCTACAACAAC...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACCCCATCTGTGGTGACTaGTGCGAACACAGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDPICGD*CEHSRR
Trigger: TCTTCTACTGTGTTCGCAGCAGTCACCACAGATGGG...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR GCA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACTGGATGAGATTGAACTaGACGTGGGTGAGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDWMRLN*TWVSLF
Trigger: GAACAGGCTCACCCACGTGCAGTTCAATCTCATCCA...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGTTCTGGGGTGCGTGTaGGTTGTTGGCTGTCAAAAT +
Preference number: 4 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVEVLGCV*VVGCQN
Trigger: ATTTTGACAGCCAACAACCCACACGCACCCCAGAAC...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAATACCTGACAATGTTCTaGGGTGCGTGTGGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVEYLTMF*GACGLL
Trigger: CAACAACCCACACGCACCCCAGAACATTGTCAGGTA...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACTGTACTCAGGGAAGCTaGGGTTCTTCAGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDCTQGS*GSSGCR
Trigger: TCTACAGCCTGAAGAACCCCAGCTTCCCTGAGTACA...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGTTTGTCCGTCTCCTTaGCCACACACAAGAAATCTG +
Preference number: 4 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVEVCPSP*PHTRNL
Trigger: CAGATTTCTTGTGTGTGGTCAAGGAGACGGACAAAC...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACGTTTGTCCGTCTCCTTaGCCACACACAAGAAATCTG +
Preference number: 4 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDVCPSP*PHTRNL
Trigger: CAGATTTCTTGTGTGTGGTCAAGGAGACGGACAAAC...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAACTGTCAAAATCCGAGTaGACTCCTCCTTTAACTCCG +
Preference number: 4 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVELSKSE*TPPLTP
Trigger: CGGAGTTAAAGGAGGAGTTCACTCGGATTTTGACAG...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR TCA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAACCTTGACAGACTCCTaGGAACCTGCCACTAATTCA +
Preference number: 4 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVETLTDS*EPATNS
Trigger: TGAATTAGTGGCAGGTTCTCAGGAGTCTGTCAAGGT...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242317.9
CDS-3UTR GCA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACAACAAGAAGGGAAGATaGTGGGACCTGATCAGGAGT +
Preference number: 4 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDNKKGR*WDLIRS
Trigger: ACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTT...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR GCA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACTTTCCTTTGGCATCTTaGGCAAATTGGGTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDFPLAS*ANWVRA
Trigger: AGCTCTCACCCAATTTGCGCAAGATGCCAAAGGAAA...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR GCA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACTTTCTCTCCTTGGGCTaGTTAGGAGTCATCAATTCT +
Preference number: 4 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDFLSLG*LGVINS
Trigger: AGAATTGATGACTCCTAAGCAGCCCAAGGAGAGAAA...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CCA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAATCACTGAAGTTGAACTaGTTAGTGAGCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVESLKLN*LVSFLS
Trigger: GGAGAGAAAGCTCACTAACCAGTTCAACTTCAGTGA...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS TCA 90 bp ATGGCGCCCAGGCCACATCACCCACGGCTGAGTTCAGGTCATAGATaGACATCGGGGTCCTGCAGAGGTGGAGGGTGGAAAGCCCATGGC +
Preference number: 5 (lower is better)
Translates to: MAPRPHHPRLSSGHR*TSGSCRGGGWKAHG
Trigger: GCCATGGGCTTTCCACCCTCCACCTCTGCAGGACCCCGATGTTCATCTATGACCTGAACTCAGCCGTGGGTGATGTGGCCTGGGCGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485580.1
CDS-3UTR CAA 90 bp GGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCCTGTGGCTGAAAAGTTaGTCCTGGGAGGAGGCTCCG +
Preference number: 5 (lower is better)
Translates to: GPDQEWGHMLGAKAGLGTLWLKS*SWEEAP
Trigger: CGGAGCCTCCTCCCAGGACAAACTTTTCAGCCACAG...GGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS GCA 90 bp CAGTCGCAACGGTTCTTTAGGGACAGCCGTCGTTGTGGGTCCCCGTaGCCTTGCAGGATAGAATCCAACTCCCTGACGCGGTTACCCAGC +
Preference number: 5 (lower is better)
Translates to: QSQRFFRDSRRCGSP*PCRIESNSLTRLPS
Trigger: GCTGGGTAACCGCGTCAGGGAGTTGGATTCTATCCTGCAAGGGCACGGGGACCCACAACGACGGCTGTCCCTAAAGAACCGTTGCGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCGGTGCGTGTGGGTTGTaGGCTGTCAAAATCCGAGTG +
Preference number: 5 (lower is better)
Translates to: GPDQEWGHMLGAKAGLGTGACGL*AVKIRV
Trigger: CACTCGGATTTTGACAGCCAACAACCCACACGCACC...GGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCAGTGAGCCTGTTCTTTTaGGCCGCCACAGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPVSLFF*AATGWL
Trigger: CAACCAGCCTGTGGCGGCCAAAAAGAACAGGCTCAC...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS GCA 90 bp CAACGGTTCTTTAGGGACAGCCGTCGTTGTGGGTCCCCGTGCCCTTaGAGGATAGAATCCAACTCCCTGACGCGGTTACCCAGCAACCGA +
Preference number: 5 (lower is better)
Translates to: QRFFRDSRRCGSPCP*RIESNSLTRLPSNR
Trigger: TCGGTTGCTGGGTAACCGCGTCAGGGAGTTGGATTCTATCCTGCAAGGGCACGGGGACCCACAACGACGGCTGTCCCTAAAGAACCGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614641.4
CDS-3UTR CAA 90 bp GGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCCCTTCATCTGAGTCTTaGGGGATCAGGTTCCCAACC +
Preference number: 5 (lower is better)
Translates to: GPDQEWGHMLGAKAGLGTPSSES*GIRFPT
Trigger: GGTTGGGAACCTGATCCCCAAAGACTCAGATGAAGG...GGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTCTGTGGCTGAAAAGTTaGTCCTGGGAGGAGGCTCCG +
Preference number: 5 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKALWLKS*SWEEAP
Trigger: CGGAGCCTCCTCCCAGGACAAACTTTTCAGCCACAG...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCATGAACATCGGGGTCTaGATGGTGTGGTCCCAGATC +
Preference number: 5 (lower is better)
Translates to: GPDQEWGHMLGAKAGLGTMNIGV*MVWSQI
Trigger: GATCTGGGACCACACCATCAAGACCCCGATGTTCAT...GGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CAA 90 bp CCATCTGTGGTGACTGCTGCGAACACAGTAGAAGAGTATGGCGCCCAGGCCACAGCCGCCACAGGCTGGTaGCAGATGGCCTCATACTTG +
Preference number: 5 (lower is better)
Translates to: PSVVTAANTVEEYGAQATAATGW*QMASYL
Trigger: CAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGGC...TGTGGCCTGGGCGCCATACTCTTCTACTGTGTTCGCAGCAGTCACCACAGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR CAA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCAACAGATCCCTGTACTTaGGATTCCAGCAGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPTDPCT*DSSRGQ
Trigger: CTGCCCTCTGCTGGAATCCAAAGTACAGGGATCTGT...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCCGCCACAGGCTGGTaGCAGATGGCCTCATACTTG +
Preference number: 5 (lower is better)
Translates to: EQEGKMLGPDQEWGHMLGAATGW*QMASYL
Trigger: CAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGGC...ACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCAAATTGGGTGAGAGCTaGAGGCTGATGATGTGCCCA +
Preference number: 5 (lower is better)
Translates to: GPDQEWGHMLGAKAGLGTKLGES*RLMMCP
Trigger: TGGGCACATCATCAGCCTCAAGCTCTCACCCAATTT...GGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS TCA 90 bp GAACACAGTAGAAGAGTATGGCGCCCAGGCCACATCACCCACGGCTaGGTTCAGGTCATAGATGAACATCGGGGTCCTGCAGAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: EHSRRVWRPGHITHG*VQVIDEHRGPAEVE
Trigger: CTCCACCTCTGCAGGACCCCGATGTTCATCTATGACCTGAACTCAGCCGTGGGTGATGTGGCCTGGGCGCCATACTCTTCTACTGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485580.1
CDS-3UTR CAA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCAGGTCTAACTGTGGCTTaGGATTGGGCCCATTCATCT +
Preference number: 5 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPGLTVA*DWAHSS
Trigger: AGATGAATGGGCCCAATCCAAAGCCACAGTTAGACC...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGTGAGCTTTCTCTCCTaGGGCTGCTTAGGAGTCATC +
Preference number: 5 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKAVSFLS*GCLGVI
Trigger: GATGACTCCTAAGCAGCCCAAGGAGAGAAAGCTCAC...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGTGAGCCTGTTCTTTTaGGCCGCCACAGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: EQEGKMLGPDQEWGHMLGVSLFF*AATGWL
Trigger: CAACCAGCCTGTGGCGGCCAAAAAGAACAGGCTCAC...ACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp TTGGGTGAGAGCTTGAGGCTGATGATGTGCCCACGGTCATCGCCCACAATGATGGTGAGCCTGTTCTTTTaGGCCGCCACAGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: LGESLRLMMCPRSSPTMMVSLFF*AATGWL
Trigger: CAACCAGCCTGTGGCGGCCAAAAAGAACAGGCTCAC...CATCATTGTGGGCGATGACCGTGGGCACATCATCAGCCTCAAGCTCTCACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR CAA 90 bp GACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCAACCAGGTTCAGCAGTTaGTCCAGTTTCGCAATCTCC +
Preference number: 5 (lower is better)
Translates to: DLIRSGVTCWVLRLGWVPTRFSS*SSFAIS
Trigger: GGAGATTGCGAAACTGGACAAACTGCTGAACCTGGT...TGGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS TCA 90 bp TGGTGTGGTCCCAGATCTTCACTGTCCAGTCGGAGCTGCAGGACATaGAGACCTTGGTGTGGTATGGGTTCCAGGACACAGTGTCCACTG +
Preference number: 5 (lower is better)
Translates to: WCGPRSSLSSRSCRT*RPWCGMGSRTQCPL
Trigger: CAGTGGACACTGTGTCCTGGAACCCATACCACACCAAGGTCTTCATGTCCTGCAGCTCCGACTGGACAGTGAAGATCTGGGACCACACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000485580.1
ENST00000614641.4
CDS GCA 90 bp CTTCTTGAGGTTGTAAATGGCCACGTTGCCGTCATAGTGGCCTACTaGCACCAGGTAGGGGTGGTCCACGTGGATGTCGAGACACATGAC +
Preference number: 5 (lower is better)
Translates to: LLEVVNGHVAVIVAY*HQVGVVHVDVETHD
Trigger: GTCATGTGTCTCGACATCCACGTGGACCACCCCTACCTGGTGGCAGTAGGCCACTATGACGGCAACGTGGCCATTTACAACCTCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000470169.5
ENST00000614641.4
CDS-3UTR CAA 90 bp GGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGGGCTGGGTACCCTGAAGACAAAAAGTTaGTCCGTCTCCTTGACCACA +
Preference number: 5 (lower is better)
Translates to: GPDQEWGHMLGAKAGLGTLKTKS*SVSLTT
Trigger: TGTGGTCAAGGAGACGGACAAACTTTTTGTCTTCAG...GGTACCCAGCCCAGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTCTTGGCTTTGTCATTTaGGAACTTCCAGAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKALGFVI*ELPERQ
Trigger: CTGCCGCTCTGGAAGTTCCAAAATGACAAAGCCAAG...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGCAGGACATGAAGACCTaGGTGTGGTATGGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: EGKMLGPDQEWGHMLGAKQDMKT*VWYGFQ
Trigger: CTGGAACCCATACCACACCAAGGTCTTCATGTCCTG...CTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CAA 90 bp GAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGGCATCTTGCGCAAATaGGGTGAGAGCTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: EQEGKMLGPDQEWGHMLGGILRK*GESLRL
Trigger: CAGCCTCAAGCTCTCACCCAATTTGCGCAAGATGCC...ACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTACCAGGTTCAGCAGTTaGTCCAGTTTCGCAATCTCC +
Preference number: 5 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKATRFSS*SSFAIS
Trigger: GGAGATTGCGAAACTGGACAAACTGCTGAACCTGGT...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS TCA 90 bp GAACACAGTAGAAGAGTATGGCGCCCAGGCCACATCACCCACGGCTaGGTTCAGGTCATAGATGAACATCGGGGTCTTGATGGTGTGGTC +
Preference number: 5 (lower is better)
Translates to: EHSRRVWRPGHITHG*VQVIDEHRGLDGVV
Trigger: GACCACACCATCAAGACCCCGATGTTCATCTATGACCTGAACTCAGCCGTGGGTGATGTGGCCTGGGCGCCATACTCTTCTACTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CAA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCTGGGTCCCCGTGCCCTaGCAGGATAGAATCCAACTC +
Preference number: 5 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVWVPVP*QDRIQL
Trigger: GAGTTGGATTCTATCCTGCAAGGGCACGGGGACCCA...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGGGTCCCCGTGCCCTaGCAGGATAGAATCCAACTC +
Preference number: 5 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTWVPVP*QDRIQL
Trigger: GAGTTGGATTCTATCCTGCAAGGGCACGGGGACCCA...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp ACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCGTGTGGGTTGTaGGCTGTCAAAATCCGAGTG +
Preference number: 5 (lower is better)
Translates to: TEQEGKMLGPDQEWGHMLGACGL*AVKIRV
Trigger: CACTCGGATTTTGACAGCCAACAACCCACACGCACC...CAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCCCTTCATCTGAGTCTTaGGGGATCAGGTTCCCAACC +
Preference number: 5 (lower is better)
Translates to: GQALGVLYSSDGTETEASPSSES*GIRFPT
Trigger: GGTTGGGAACCTGATCCCCAAAGACTCAGATGAAGG...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTTCAGTTTCTAACTCCTaGGGCTCTTCGTCTTCTTCG +
Preference number: 5 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKASVSNS*GSSSSS
Trigger: CGAAGAAGACGAAGAGCCCAAGGAGTTAGAAACTGA...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGCCCTCTCACTGAAGTaGAACTGGTTAGTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKAALSLK*NWLVSF
Trigger: AAAGCTCACTAACCAGTTCAACTTCAGTGAGAGGGC...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTACAGATCCCTGTACTTaGGATTCCAGCAGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: EQEGKMLGPDQEWGHMLGTDPCT*DSSRGQ
Trigger: CTGCCCTCTGCTGGAATCCAAAGTACAGGGATCTGT...ACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GACCTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGACAGGGTCTGAGTGCTaGCCAGACTTGGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: DLKEQNKKGRCWDLIRSGTGSEC*PDLAEL
Trigger: CAGCTCAGCCAAGTCTGGCAAGCACTCAGACCCTGT...CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACAACAGGGTCTGAGTGCTaGCCAGACTTGGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTTGSEC*PDLAEL
Trigger: CAGCTCAGCCAAGTCTGGCAAGCACTCAGACCCTGT...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp CTGATGATGTGCCCACGGTCATCGCCCACAATGATGATGGGGTGGATGAGATTGTCATCCTTCTGCCACTaGACCTGCCACACAGGGTCT +
Preference number: 5 (lower is better)
Translates to: LMMCPRSSPTMMMGWMRLSSFCH*TCHTGS
Trigger: AGACCCTGTGTGGCAGGTCAAGTGGCAGAAGGATGA...CAATCTCATCCACCCCATCATCATTGTGGGCGATGACCGTGGGCACATCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR CAA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCCAGGACATGAAGACCTaGGTGTGGTATGGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: GQALGVLYSSDGTETEASQDMKT*VWYGFQ
Trigger: CTGGAACCCATACCACACCAAGGTCTTCATGTCCTG...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CAA 90 bp CCATCTGTGGTGACTGCTGCGAACACAGTAGAAGAGTATGGCGCCCAGGCCACAAAATTGGGTGAGAGCTaGAGGCTGATGATGTGCCCA +
Preference number: 5 (lower is better)
Translates to: PSVVTAANTVEEYGAQATKLGES*RLMMCP
Trigger: TGGGCACATCATCAGCCTCAAGCTCTCACCCAATTT...TGTGGCCTGGGCGCCATACTCTTCTACTGTGTTCGCAGCAGTCACCACAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR CAA 90 bp TTTGGCATCTTGCGCAAATTGGGTGAGAGCTTGAGGCTGATGATGTGCCCACGGGGCATCTTGCGCAAATaGGGTGAGAGCTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: FGILRKLGESLRLMMCPRGILRK*GESLRL
Trigger: CAGCCTCAAGCTCTCACCCAATTTGCGCAAGATGCC...CCGTGGGCACATCATCAGCCTCAAGCTCTCACCCAATTTGCGCAAGATGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR CAA 90 bp ACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGCCAGCCCCTCAGGTCTaGATTTTCACTTCCCTCACC +
Preference number: 5 (lower is better)
Translates to: TEQEGKMLGPDQEWGHMLPAPQV*IFTSLT
Trigger: GGTGAGGGAAGTGAAAATCAAGACCTGAGGGGCTGG...CAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CAA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACCCAGCCCCTCAGGTCTaGATTTTCACTTCCCTCACC +
Preference number: 5 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDPAPQV*IFTSLT
Trigger: GGTGAGGGAAGTGAAAATCAAGACCTGAGGGGCTGG...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS TCA 90 bp CTCCGTCTGGCATTCTCGATCCCGGACAGGGTTGTTGTAGGTCTGTaGGGCCCTCTCACTGAAGTTGAACTGGTTAGTGAGCTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: LRLAFSIPDRVVVGL*GPLTEVELVSELSL
Trigger: GAGAGAAAGCTCACTAACCAGTTCAACTTCAGTGAGAGGGCCTCACAGACCTACAACAACCCTGTCCGGGATCGAGAATGCCAGACGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000488369.1
ENST00000614641.4
CDS CCA 90 bp CTAATTCATCGCGGTAATGCTGCCGCCGTCCTTCATCTGAGTCTTTaGGGATCAGGTTCCCAACCTGGGTGTAGTGAACTGCCAGTTGGT +
Preference number: 5 (lower is better)
Translates to: LIHRGNAAAVLHLSL*GSGSQPGCSELPVG
Trigger: ACCAACTGGCAGTTCACTACACCCAGGTTGGGAACCTGATCCCCAAAGACTCAGATGAAGGACGGCGGCAGCATTACCGCGATGAATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000488369.1
ENST00000614641.4
CDS CCA 90 bp CCTCACCAGGTTCAGCAGTTTGTCCAGTTTCGCAATCTCCACAGCTaGACCCTTCTGCACCTCCTGCCCCTTCTTTTCCTTTGGCATCTT +
Preference number: 5 (lower is better)
Translates to: PHQVQQFVQFRNLHS*TLLHLLPLLFLWHL
Trigger: AAGATGCCAAAGGAAAAGAAGGGGCAGGAGGTGCAGAAGGGTCCAGCTGTGGAGATTGCGAAACTGGACAAACTGCTGAACCTGGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGGGGTGCGTGTGGGTaGTTGGCTGTCAAAATCCGA +
Preference number: 5 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTWGACG*LAVKIR
Trigger: TCGGATTTTGACAGCCAACAACCCACACGCACCCCA...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACGTGAGCTTTCTCTCCTaGGGCTGCTTAGGAGTCATC +
Preference number: 5 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDVSFLS*GCLGVI
Trigger: GATGACTCCTAAGCAGCCCAAGGAGAGAAAGCTCAC...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCGACAGGCGCTTGGCTTaGTCATTTTGGAACTTCCAG +
Preference number: 5 (lower is better)
Translates to: GQALGVLYSSDGTETEASDRRLA*SFWNFQ
Trigger: CTGGAAGTTCCAAAATGACAAAGCCAAGCGCCTGTC...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp ACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGTGACGGACAGGCGCTaGGCTTTGTCATTTTGGAAC +
Preference number: 5 (lower is better)
Translates to: TEQEGKMLGPDQEWGHMLVTDRR*ALSFWN
Trigger: GTTCCAAAATGACAAAGCCAAGCGCCTGTCCGTCAC...CAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACGTGACGGACAGGCGCTaGGCTTTGTCATTTTGGAAC +
Preference number: 5 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDVTDRR*ALSFWN
Trigger: GTTCCAAAATGACAAAGCCAAGCGCCTGTCCGTCAC...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GTCAAATATGTGGGCCTTCCCATCTGTGGTGACTGCTGCGAACACAGTAGAAGAACAGGGTCTGAGTGCTaGCCAGACTTGGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: VKYVGLPICGDCCEHSRRTGSEC*PDLAEL
Trigger: CAGCTCAGCCAAGTCTGGCAAGCACTCAGACCCTGT...TCTTCTACTGTGTTCGCAGCAGTCACCACAGATGGGAAGGCCCACATATTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR CAA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCACCAGGTTCAGCAGTTaGTCCAGTTTCGCAATCTCC +
Preference number: 5 (lower is better)
Translates to: GQALGVLYSSDGTETEASTRFSS*SSFAIS
Trigger: GGAGATTGCGAAACTGGACAAACTGCTGAACCTGGT...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CAA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACACCAGCCCCTCAGGTCTaGATTTTCACTTCCCTCACC +
Preference number: 5 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTPAPQV*IFTSLT
Trigger: GGTGAGGGAAGTGAAAATCAAGACCTGAGGGGCTGG...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS TCA 90 bp CATGAAGACCTTGGTGTGGTATGGGTTCCAGGACACAGTGTCCACTaGCATGTTGTGGGCGTCATAGGTGTCGAGGAATTGGCTGGAGTA +
Preference number: 5 (lower is better)
Translates to: HEDLGVVWVPGHSVH*HVVGVIGVEELAGV
Trigger: TACTCCAGCCAATTCCTCGACACCTATGACGCCCACAACATGTCAGTGGACACTGTGTCCTGGAACCCATACCACACCAAGGTCTTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000485580.1
ENST00000614641.4
CDS-3UTR CAA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACGGTCTAACTGTGGCTTaGGATTGGGCCCATTCATCT +
Preference number: 5 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDGLTVA*DWAHSS
Trigger: AGATGAATGGGCCCAATCCAAAGCCACAGTTAGACC...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCTGCAGGCACATCTGTTaGACTCCCAGGCTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVCRHIC*TPRLSF
Trigger: GAAACTGAGCCTGGGAGTCAAACAGATGTGCCTGCA...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACGACAGGCGCTTGGCTTaGTCATTTTGGAACTTCCAG +
Preference number: 5 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDDRRLA*SFWNFQ
Trigger: CTGGAAGTTCCAAAATGACAAAGCCAAGCGCCTGTC...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCCACATGACGCCGCTGTaGCTGCTGAACATGTACTCA +
Preference number: 5 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVHMTPL*LLNMYS
Trigger: TGAGTACATGTTCAGCAGCAACAGCGGCGTCATGTG...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp CTGTTCTTTTTGGCCGCCACAGGCTGGTTGCAGATGGCCTCATACTTGTTGATGCACATGACGCCGCTGTaGCTGCTGAACATGTACTCA +
Preference number: 5 (lower is better)
Translates to: LFFLAATGWLQMASYLLMHMTPL*LLNMYS
Trigger: TGAGTACATGTTCAGCAGCAACAGCGGCGTCATGTG...CATCAACAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGGCCAAAAAGAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR CAA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACACACATGACGCCGCTGTaGCTGCTGAACATGTACTCA +
Preference number: 5 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTHMTPL*LLNMYS
Trigger: TGAGTACATGTTCAGCAGCAACAGCGGCGTCATGTG...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGGCTGAAGAAGTTAAGGTTTaGGTCCATGTCATCCTTCTG +
Preference number: 5 (lower is better)
Translates to: GKMLGPDQEWGHMLGAKAEEVKV*VHVILL
Trigger: CAGAAGGATGACATGGACCAAAACCTTAACTTCTTC...AGCCTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGGGTGCTAAGATAGGTGTCGAGGAATaGGCTGGAGTAGGATTTAGA +
Preference number: 5 (lower is better)
Translates to: EGKMLGPDQEWGHMLGAKIGVEE*AGVGFR
Trigger: TCTAAATCCTACTCCAGCCAATTCCTCGACACCTAT...CTTAGCACCCAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CAA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCATGAACATCGGGGTCTaGATGGTGTGGTCCCAGATC +
Preference number: 5 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVMNIGV*MVWSQI
Trigger: GATCTGGGACCACACCATCAAGACCCCGATGTTCAT...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS TCA 90 bp TCTTCAGTCACTTTTTCAGCTGCCCCAGCTGCAGGCACATCTGTTTaGCTCCCAGGCTCAGTTTCTAACTCCTTGGGCTCTTCGTCTTCT +
Preference number: 5 (lower is better)
Translates to: SSVTFSAAPAAGTSV*LPGSVSNSLGSSSS
Trigger: AGAAGACGAAGAGCCCAAGGAGTTAGAAACTGAGCCTGGGAGTCAAACAGATGTGCCTGCAGCTGGGGCAGCTGAAAAAGTGACTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000488369.1
ENST00000614641.4
CDS TCA 90 bp GAACACAGTAGAAGAGTATGGCGCCCAGGCCACATCACCCACGGCTaGGTTCAGGTCATAGATGAACATCGGGGTCCTTGTAGATTTTTC +
Preference number: 5 (lower is better)
Translates to: EHSRRVWRPGHITHG*VQVIDEHRGPCRFF
Trigger: GAAAAATCTACAAGGACCCCGATGTTCATCTATGACCTGAACTCAGCCGTGGGTGATGTGGCCTGGGCGCCATACTCTTCTACTGTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS-3UTR CAA 90 bp ACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGTCAGTTTCTAACTCCTaGGGCTCTTCGTCTTCTTCG +
Preference number: 5 (lower is better)
Translates to: TEQEGKMLGPDQEWGHMLSVSNS*GSSSSS
Trigger: CGAAGAAGACGAAGAGCCCAAGGAGTTAGAAACTGA...CAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTGAGGCCAGCATAGGTGTCGAGGAATaGGCTGGAGTAGGATTTAGA +
Preference number: 5 (lower is better)
Translates to: GQALGVLYSSDGTETEASIGVEE*AGVGFR
Trigger: TCTAAATCCTACTCCAGCCAATTCCTCGACACCTAT...GCTGGCCTCAGTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CAA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACAAAATTGGGTGAGAGCTaGAGGCTGATGATGTGCCCA +
Preference number: 5 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTKLGES*RLMMCP
Trigger: TGGGCACATCATCAGCCTCAAGCTCTCACCCAATTT...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp ACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACATGCTGTTTTCCTTTGGCATCTaGCGCAAATTGGGTGAGAGC +
Preference number: 5 (lower is better)
Translates to: TEQEGKMLGPDQEWGHMLFSFGI*RKLGES
Trigger: GCTCTCACCCAATTTGCGCAAGATGCCAAAGGAAAA...CAGCATGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS CCA 90 bp GACACAATCCTGCCGTCAGATGACACAGAGAAGAAGTTAAGGTTTTaGTCCATGTCATCCTTCTGCCACTTGACCTGCCACACAGGGTCT +
Preference number: 5 (lower is better)
Translates to: DTILPSDDTEKKLRF*SMSSFCHLTCHTGS
Trigger: AGACCCTGTGTGGCAGGTCAAGTGGCAGAAGGATGACATGGACCAAAACCTTAACTTCTTCTCTGTGTCATCTGACGGCAGGATTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000470169.5
ENST00000614641.4
CDS-3UTR CAA 90 bp AAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCACAGTAGTGAACTGCCAGTaGGTTCACAAAGCCAATAGG +
Preference number: 5 (lower is better)
Translates to: KEQNKKGRCWDLIRSGVTVVNCQ*VHKANR
Trigger: CCTATTGGCTTTGTGAACCAACTGGCAGTTCACTAC...TGTGACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACTCATATGTATTCTGGTaGACCATCCGCTCCATGATC +
Preference number: 5 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDSYVFW*TIRSMI
Trigger: GATCATGGAGCGGATGGTCAACCAGAATACATATGA...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCTTTTCCTTTGGCATCTaGCGCAAATTGGGTGAGAGC +
Preference number: 5 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVFSFGI*RKLGES
Trigger: GCTCTCACCCAATTTGCGCAAGATGCCAAAGGAAAA...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS CCA 90 bp CTGCAGGCACATCTGTTTGACTCCCAGGCTCAGTTTCTAACTCCTTaGGCTCTTCGTCTTCTTCGAGGTTTCCTGTTTCTGAAATCACCT +
Preference number: 5 (lower is better)
Translates to: LQAHLFDSQAQFLTP*ALRLLRGFLFLKSP
Trigger: AGGTGATTTCAGAAACAGGAAACCTCGAAGAAGACGAAGAGCCCAAGGAGTTAGAAACTGAGCCTGGGAGTCAAACAGATGTGCCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000488369.1
ENST00000614641.4
CDS CCA 90 bp AAACCCAGACTCCATTGCTTTTTGAAGCTGTACCTGACAATGTTCTaGGGTGCGTGTGGGTTGTTGGCTGTCAAAATCCGAGTGAACTCC +
Preference number: 5 (lower is better)
Translates to: KPRLHCFLKLYLTMF*GACGLLAVKIRVNS
Trigger: GGAGTTCACTCGGATTTTGACAGCCAACAACCCACACGCACCCCAGAACATTGTCAGGTACAGCTTCAAAAAGCAATGGAGTCTGGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000470982.5
ENST00000488369.1
CDS-3UTR CAA 90 bp TGGGTACCAGGGTCAAGCCCTAGGAGTACTGTATTCAAGCGATGGGACAGAGACGAAGAAGTTAAGGTTTaGGTCCATGTCATCCTTCTG +
Preference number: 5 (lower is better)
Translates to: WVPGSSPRSTVFKRWDRDEEVKV*VHVILL
Trigger: CAGAAGGATGACATGGACCAAAACCTTAACTTCTTC...GTCTCTGTCCCATCGCTTGAATACAGTACTCCTAGGGCTTGACCCTGGTACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCATAGGTGTCGAGGAATaGGCTGGAGTAGGATTTAGA +
Preference number: 5 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVIGVEE*AGVGFR
Trigger: TCTAAATCCTACTCCAGCCAATTCCTCGACACCTAT...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CAA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGCCGCCACAGGCTGGTaGCAGATGGCCTCATACTTG +
Preference number: 5 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVEAATGW*QMASYL
Trigger: CAAGTATGAGGCCATCTGCAACCAGCCTGTGGCGGC...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS CCA 90 bp ATAGGCTTATATGTGCCTTCTTTGAAGCTGTACCTGACAATGTTCTaGGGTGCGTGTGGGTTGTTGGCTGTCAAAATCCGAGTGAACTCC +
Preference number: 5 (lower is better)
Translates to: IGLYVPSLKLYLTMF*GACGLLAVKIRVNS
Trigger: GGAGTTCACTCGGATTTTGACAGCCAACAACCCACACGCACCCCAGAACATTGTCAGGTACAGCTTCAAAGAAGGCACATATAAGCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000614641.4
CDS-3UTR CAA 90 bp GACCTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGCATGATCTTAGCAGCTaGGGACAATTTGATGAGATC +
Preference number: 5 (lower is better)
Translates to: DLKEQNKKGRCWDLIRSGHDLSS*GQFDEI
Trigger: GATCTCATCAAATTGTCCCAAGCTGCTAAGATCATG...CCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GATGATGTGCCCACGGTCATCGCCCACAATGATGATGGGGTGGATGAGATTGAAGAAGAAGTTAAGGTTTaGGTCCATGTCATCCTTCTG +
Preference number: 5 (lower is better)
Translates to: DDVPTVIAHNDDGVDEIEEEVKV*VHVILL
Trigger: CAGAAGGATGACATGGACCAAAACCTTAACTTCTTC...TTCAATCTCATCCACCCCATCATCATTGTGGGCGATGACCGTGGGCACATCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS TCA 90 bp CAGCTTTCTCTTCACGAGAGTCCAAGACACAATCCTGCCGTCAGATaGCACAGAGAAGAAGTTAAGGTTTTGGTCCATGTCATCCTTCTG +
Preference number: 5 (lower is better)
Translates to: QLSLHESPRHNPAVR*HREEVKVLVHVILL
Trigger: CAGAAGGATGACATGGACCAAAACCTTAACTTCTTCTCTGTGTCATCTGACGGCAGGATTGTGTCTTGGACTCTCGTGAAGAGAAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000470169.5
ENST00000614641.4
CDS-3UTR CAA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACTGGGGTGCGTGTGGGTaGTTGGCTGTCAAAATCCGA +
Preference number: 5 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDWGACG*LAVKIR
Trigger: TCGGATTTTGACAGCCAACAACCCACACGCACCCCA...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp CTTAAGGAACAGAACAAGAAGGGAAGATGCTGGGACCTGATCAGGAGTGGGGTCTTATATGTGCCTTCTTaGAAGCTGTACCTGACAATG +
Preference number: 5 (lower is better)
Translates to: LKEQNKKGRCWDLIRSGVLYVPS*KLYLTM
Trigger: CATTGTCAGGTACAGCTTCAAAGAAGGCACATATAA...GACCCCACTCCTGATCAGGTCCCAGCATCTTCCCTTCTTGTTCTGTTCCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAATCATCCTTCTGCCACTaGACCTGCCACACAGGGTCT +
Preference number: 5 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVESSFCH*TCHTGS
Trigger: AGACCCTGTGTGGCAGGTCAAGTGGCAGAAGGATGA...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACTCATCCTTCTGCCACTaGACCTGCCACACAGGGTCT +
Preference number: 5 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDSSFCH*TCHTGS
Trigger: AGACCCTGTGTGGCAGGTCAAGTGGCAGAAGGATGA...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACGGCATCTTGCGCAAATaGGGTGAGAGCTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDGILRK*GESLRL
Trigger: CAGCCTCAAGCTCTCACCCAATTTGCGCAAGATGCC...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS TCA 90 bp TGGGCTCTTCGTCTTCTTCGAGGTTTCCTGTTTCTGAAATCACCTTaGCAGACTCCTGAGAACCTTGGTAGGATACTGCCACTAATTCAT +
Preference number: 5 (lower is better)
Translates to: WALRLLRGFLFLKSP*QTPENLGRILPLIH
Trigger: ATGAATTAGTGGCAGTATCCTACCAAGGTTCTCAGGAGTCTGTCAAGGTGATTTCAGAAACAGGAAACCTCGAAGAAGACGAAGAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614641.4
CDS GCA 90 bp CTCTCACTGAAGTTGAACTGGTTAGTGAGCTTTCTCTCCTTGGGCTaGTTAGGAGTCATCAATTCTTCTTCAGTCACTTTTTCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: LSLKLNWLVSFLSLG*LGVINSSSVTFSAA
Trigger: GGCAGCTGAAAAAGTGACTGAAGAAGAATTGATGACTCCTAAGCAGCCCAAGGAGAGAAAGCTCACTAACCAGTTCAACTTCAGTGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000488369.1
ENST00000614641.4
CDS GCA 90 bp GTCATAGATGAACATCGGGGTCCTTGTAGATTTTTCCCTCCTCTGTaGCCACTAGGAACATGTAGTCAATCTCTTTGTGGAAGTCAAAGG +
Preference number: 5 (lower is better)
Translates to: VIDEHRGPCRFFPPL*PLGTCSQSLCGSQR
Trigger: CCTTTGACTTCCACAAAGAGATTGACTACATGTTCCTAGTGGGCACAGAGGAGGGAAAAATCTACAAGGACCCCGATGTTCATCTATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS CCA 90 bp GAAGACAAAAAGTTTGTCCGTCTCCTTGACCACACACAAGAAATCTaGACTCTCTTCCACTTCAGTTACCAGTCGCAACGGTTCTTTAGG +
Preference number: 5 (lower is better)
Translates to: EDKKFVRLLDHTQEI*TLFHFSYQSQRFFR
Trigger: CCTAAAGAACCGTTGCGACTGGTAACTGAAGTGGAAGAGAGTCCAGATTTCTTGTGTGTGGTCAAGGAGACGGACAAACTTTTTGTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000614641.4
CDS-3UTR CAA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAAACTGTGGCTTTGGATaGGGCCCATTCATCTGTGCC +
Preference number: 5 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVENCGFG*GPFICA
Trigger: GGCACAGATGAATGGGCCCAATCCAAAGCCACAGTT...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACTGCAGGCACATCTGTTaGACTCCCAGGCTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDCRHIC*TPRLSF
Trigger: GAAACTGAGCCTGGGAGTCAAACAGATGTGCCTGCA...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACCAGGACATGAAGACCTaGGTGTGGTATGGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDQDMKT*VWYGFQ
Trigger: CTGGAACCCATACCACACCAAGGTCTTCATGTCCTG...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS-3UTR CAA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACCTTGGCTTTGTCATTTaGGAACTTCCAGAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDLGFVI*ELPERQ
Trigger: CTGCCGCTCTGGAAGTTCCAAAATGACAAAGCCAAG...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGTAGTGAACTGCCAGTaGGTTCACAAAGCCAATAGG +
Preference number: 5 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVEVVNCQ*VHKANR
Trigger: CCTATTGGCTTTGTGAACCAACTGGCAGTTCACTAC...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACGCCCTCTCACTGAAGTaGAACTGGTTAGTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDALSLK*NWLVSF
Trigger: AAAGCTCACTAACCAGTTCAACTTCAGTGAGAGGGC...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACCTGAAGACAAAAAGTTaGTCCGTCTCCTTGACCACA +
Preference number: 5 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDLKTKS*SVSLTT
Trigger: TGTGGTCAAGGAGACGGACAAACTTTTTGTCTTCAG...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp TGGGTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAATCATATGTATTCTGGTaGACCATCCGCTCCATGATC +
Preference number: 5 (lower is better)
Translates to: WVSTQVYLCKVRGVMVVESYVFW*TIRSMI
Trigger: GATCATGGAGCGGATGGTCAACCAGAATACATATGA...TTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS-3UTR CAA 90 bp GTTTCTACACAGGTTTATTTGTGCAAAGTTAGAGGGGTAATGGTGGTTGAAGACCATGATCTTAGCAGCTaGGGACAATTTGATGAGATC +
Preference number: 5 (lower is better)
Translates to: VSTQVYLCKVRGVMVVEDHDLSS*GQFDEI
Trigger: GATCTCATCAAATTGTCCCAAGCTGCTAAGATCATG...GTCTTCAACCACCATTACCCCTCTAACTTTGCACAAATAAACCTGTGTAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS GCA 72 bp CGGTTCTTTAGGGACAGCCGTCGTTGTGGGTCCCCGTaGCCTTGCAGGATAGAATCCAACTCCCTGACGCGG +
Preference number: 6 (lower is better)
Translates to: RFFRDSRRCGSP*PCRIESNSLTR
Trigger: CCGCGTCAGGGAGTTGGATTCTATCCTGCAAGGGCACGGGGACCCACAACGACGGCTGTCCCTAAAGAACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS CCA 72 bp GGTCCAGTTGCACAGATCTCCCTGCCCCTGGAGGGCTaGAAGGATCGCCATCACACAGGTTGGGAAGCTCTG +
Preference number: 6 (lower is better)
Translates to: GPVAQISLPLEG*KDRHHTGWEAL
Trigger: CAGAGCTTCCCAACCTGTGTGATGGCGATCCTTCCAGCCCTCCAGGGGCAGGGAGATCTGTGCAACTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470982.5
CDS GCA 72 bp TTTAGGGACAGCCGTCGTTGTGGGTCCCCGTGCCCTTaGAGGATAGAATCCAACTCCCTGACGCGGTTACCC +
Preference number: 6 (lower is better)
Translates to: FRDSRRCGSPCP*RIESNSLTRLP
Trigger: GGGTAACCGCGTCAGGGAGTTGGATTCTATCCTGCAAGGGCACGGGGACCCACAACGACGGCTGTCCCTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS GCA 72 bp TCCTTCTGCCACTTGACCTGCCACACAGGGTCTGAGTaGTTGCCAGACTTGGCTGAGCTGCAGAAGGAGGGC +
Preference number: 6 (lower is better)
Translates to: SFCHLTCHTGSE*LPDLAELQKEG
Trigger: GCCCTCCTTCTGCAGCTCAGCCAAGTCTGGCAAGCACTCAGACCCTGTGTGGCAGGTCAAGTGGCAGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000470169.5
ENST00000614641.4
CDS GCA 72 bp AAGTCAAAGGCAGTGCCACAACCCACTGGGTGCAGCTaGAACCCCTCAGGAACTTCCGTGGTGCTGCCTTCC +
Preference number: 6 (lower is better)
Translates to: KSKAVPQPTGCS*NPSGTSVVLPS
Trigger: GGAAGGCAGCACCACGGAAGTTCCTGAGGGGTTGCAGCTGCACCCAGTGGGTTGTGGCACTGCCTTTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000470169.5
ENST00000614641.4
CDS CCA 72 bp AGGCAGAGCCAGGAACAGGCCCCTCACTTGATGGTGTaGTCCCAGATCTTCACTGTCCAGTCGGAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: RQSQEQAPHLMV*SQIFTVQSELQ
Trigger: CTGCAGCTCCGACTGGACAGTGAAGATCTGGGACCACACCATCAAGTGAGGGGCCTGTTCCTGGCTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485580.1
CDS CAA 72 bp GAGGGCAGTGACGGACAGGCGCTTGGCTTTGTCATTTaGGAACTTCCAGAGCGGCAGCAGGGTACCCACCTG +
Preference number: 6 (lower is better)
Translates to: EGSDGQALGFVI*ELPERQQGTHL
Trigger: CAGGTGGGTACCCTGCTGCCGCTCTGGAAGTTCCAAAATGACAAAGCCAAGCGCCTGTCCGTCACTGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS CAA 72 bp TTCTGCCACTTGACCTGCCACACAGGGTCTGAGTGCTaGCCAGACTTGGCTGAGCTGCAGAAGGAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: FCHLTCHTGSEC*PDLAELQKEGW
Trigger: CCAGCCCTCCTTCTGCAGCTCAGCCAAGTCTGGCAAGCACTCAGACCCTGTGTGGCAGGTCAAGTGGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000470169.5
ENST00000614641.4
CDS CAA 90 bp ATTCCAGCAGAGGGCAGTGACGGACAGGCGCTTGGCTTTGTCATTTaGGAACTTCCAGAGCGGCAGCAGGGTACCCACCTGGTCCCGGTA +
Preference number: 6 (lower is better)
Translates to: IPAEGSDGQALGFVI*ELPERQQGTHLVPV
Trigger: TACCGGGACCAGGTGGGTACCCTGCTGCCGCTCTGGAAGTTCCAAAATGACAAAGCCAAGCGCCTGTCCGTCACTGCCCTCTGCTGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS GCA 72 bp GTTGTAAATGGCCACGTTGCCGTCATAGTGGCCTACTaGCACCAGGTAGGGGTGGTCCACGTGGATGTCGAG +
Preference number: 6 (lower is better)
Translates to: VVNGHVAVIVAY*HQVGVVHVDVE
Trigger: CTCGACATCCACGTGGACCACCCCTACCTGGTGGCAGTAGGCCACTATGACGGCAACGTGGCCATTTACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000470169.5
ENST00000614641.4
CDS CAA 90 bp TCCGCATCGGTCAACTCCAGCTGGTCAGGGGGTCTAACTGTGGCTTaGGATTGGGCCCATTCATCTGTGCCTTCTCCCACTTCAGTCCCT +
Preference number: 6 (lower is better)
Translates to: SASVNSSWSGGLTVA*DWAHSSVPSPTSVP
Trigger: AGGGACTGAAGTGGGAGAAGGCACAGATGAATGGGCCCAATCCAAAGCCACAGTTAGACCCCCTGACCAGCTGGAGTTGACCGATGCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000488369.1
ENST00000614641.4
CDS CAA 90 bp TACTTTGGATTCCAGCAGAGGGCAGTGACGGACAGGCGCTTGGCTTaGTCATTTTGGAACTTCCAGAGCGGCAGCAGGGTACCCACCTGG +
Preference number: 6 (lower is better)
Translates to: YFGFQQRAVTDRRLA*SFWNFQSGSRVPTW
Trigger: CCAGGTGGGTACCCTGCTGCCGCTCTGGAAGTTCCAAAATGACAAAGCCAAGCGCCTGTCCGTCACTGCCCTCTGCTGGAATCCAAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS CAA 90 bp TCCCTGTACTTTGGATTCCAGCAGAGGGCAGTGACGGACAGGCGCTaGGCTTTGTCATTTTGGAACTTCCAGAGCGGCAGCAGGGTACCC +
Preference number: 6 (lower is better)
Translates to: SLYFGFQQRAVTDRR*ALSFWNFQSGSRVP
Trigger: GGGTACCCTGCTGCCGCTCTGGAAGTTCCAAAATGACAAAGCCAAGCGCCTGTCCGTCACTGCCCTCTGCTGGAATCCAAAGTACAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS CAA 90 bp ACCGCATCGGTCAACTCCAGCTGGTCAGGGGGTCTAACTGTGGCTTaGGATTGGGCCCATTCATCTGTGCCTTCTCCCACTTCAGTCCCT +
Preference number: 6 (lower is better)
Translates to: TASVNSSWSGGLTVA*DWAHSSVPSPTSVP
Trigger: AGGGACTGAAGTGGGAGAAGGCACAGATGAATGGGCCCAATCCAAAGCCACAGTTAGACCCCCTGACCAGCTGGAGTTGACCGATGCGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470982.5
CDS TCA 72 bp AGGCCACATCACCCACGGCTGAGTTCAGGTCATAGATaGACATCGGGGTCCTGCAGAGGTGGAGGGTGGAAA +
Preference number: 6 (lower is better)
Translates to: RPHHPRLSSGHR*TSGSCRGGGWK
Trigger: TTTCCACCCTCCACCTCTGCAGGACCCCGATGTTCATCTATGACCTGAACTCAGCCGTGGGTGATGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485580.1
CDS TCA 72 bp AGAAGAGTATGGCGCCCAGGCCACATCACCCACGGCTaGGTTCAGGTCATAGATGAACATCGGGGTCCTGCA +
Preference number: 6 (lower is better)
Translates to: RRVWRPGHITHG*VQVIDEHRGPA
Trigger: TGCAGGACCCCGATGTTCATCTATGACCTGAACTCAGCCGTGGGTGATGTGGCCTGGGCGCCATACTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485580.1
CDS GCA 72 bp CTCCTGCCCCTTCTTTTCCTTCCCATCTGTGGTGACTaGTGCGAACACAGTAGAAGAGTATGGCGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: LLPLLFLPICGD*CEHSRRVWRPG
Trigger: GCCTGGGCGCCATACTCTTCTACTGTGTTCGCAGCAGTCACCACAGATGGGAAGGAAAAGAAGGGGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442556.1
CDS CCA 72 bp CGCGGTAATGCTGCCGCCGTCCTTCATCTGAGTCTTTaGGGATCAGGTTCCCAACCTGGGTGTAGTGAACTG +
Preference number: 6 (lower is better)
Translates to: RGNAAAVLHLSL*GSGSQPGCSEL
Trigger: CAGTTCACTACACCCAGGTTGGGAACCTGATCCCCAAAGACTCAGATGAAGGACGGCGGCAGCATTACCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000488369.1
ENST00000614641.4
CDS CCA 72 bp CCTCCTTTAACTCTCACCGCATCGGTCAACTCCAGCTaGTCAGGGGGTCTAACTGTGGCTTTGGATTGGGCC +
Preference number: 6 (lower is better)
Translates to: PPLTLTASVNSS*SGGLTVALDWA
Trigger: GGCCCAATCCAAAGCCACAGTTAGACCCCCTGACCAGCTGGAGTTGACCGATGCGGTGAGAGTTAAAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470982.5
CDS TCA 72 bp AGAAGAGTATGGCGCCCAGGCCACATCACCCACGGCTaGGTTCAGGTCATAGATGAACATCGGGGTCCTTGT +
Preference number: 6 (lower is better)
Translates to: RRVWRPGHITHG*VQVIDEHRGPC
Trigger: ACAAGGACCCCGATGTTCATCTATGACCTGAACTCAGCCGTGGGTGATGTGGCCTGGGCGCCATACTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470169.5
CDS CCA 72 bp GGGAGCCTTCGCAGAAGCAGGAATCATCTCAACCCCTaGAGAGCCTACAAAACGCTCCCTCGTCTGAAGACA +
Preference number: 6 (lower is better)
Translates to: GSLRRSRNHLNP*RAYKTLPRLKT
Trigger: TGTCTTCAGACGAGGGAGCGTTTTGTAGGCTCTCCAGGGGTTGAGATGATTCCTGCTTCTGCGAAGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000614641.4
CDS CCA 72 bp AACTCCTCCTTTAACTCCGCATCGGTCAACTCCAGCTaGTCAGGGGGTCTAACTGTGGCTTTGGATTGGGCC +
Preference number: 6 (lower is better)
Translates to: NSSFNSASVNSS*SGGLTVALDWA
Trigger: GGCCCAATCCAAAGCCACAGTTAGACCCCCTGACCAGCTGGAGTTGACCGATGCGGAGTTAAAGGAGGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000488369.1
ENST00000614641.4
CDS CCA 72 bp GTCCAGTCGGAGCTGCAGGACATGAAGACCTTGGTGTaGTATGGGTTCCAGGACACAGTGTCCACTGACATG +
Preference number: 6 (lower is better)
Translates to: VQSELQDMKTLV*YGFQDTVSTDM
Trigger: CATGTCAGTGGACACTGTGTCCTGGAACCCATACCACACCAAGGTCTTCATGTCCTGCAGCTCCGACTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000485580.1
ENST00000614641.4
CDS CCA 72 bp CCCCTGGAGGGCTGGAAGGATCGCCATCACACAGGTTaGGAAGCTCTGTATTTAAAAGTCACCACAGAGCCC +
Preference number: 6 (lower is better)
Translates to: PLEGWKDRHHTG*EALYLKVTTEP
Trigger: GGGCTCTGTGGTGACTTTTAAATACAGAGCTTCCCAACCTGTGTGATGGCGATCCTTCCAGCCCTCCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470982.5
CDS CAA 72 bp CTCCAGCTGGTCAGGGGGTCTAACTGTGGCTTTGGATaGGGCCCATTCATCTGTGCCTTCTCCCACTTCAGT +
Preference number: 6 (lower is better)
Translates to: LQLVRGSNCGFG*GPFICAFSHFS
Trigger: ACTGAAGTGGGAGAAGGCACAGATGAATGGGCCCAATCCAAAGCCACAGTTAGACCCCCTGACCAGCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000470982.5
ENST00000488369.1
ENST00000614641.4
CDS CAA 72 bp TTTGGATTCCAGCAGAGGGCAGTGACGGACAGGCGCTaGGCTTTGTCATTTTGGAACTTCCAGAGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: FGFQQRAVTDRR*ALSFWNFQSGS
Trigger: GCTGCCGCTCTGGAAGTTCCAAAATGACAAAGCCAAGCGCCTGTCCGTCACTGCCCTCTGCTGGAATCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS CAA 72 bp GCCCCTGGAGGGCTGGAAGGATCGCCATCACACAGGTaGGGAAGCTCTGTATTTAAAAGTCACCACAGAGCC +
Preference number: 6 (lower is better)
Translates to: APGGLEGSPSHR*GSSVFKSHHRA
Trigger: GGCTCTGTGGTGACTTTTAAATACAGAGCTTCCCAACCTGTGTGATGGCGATCCTTCCAGCCCTCCAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470982.5
CDS CAA 90 bp CATAGGCATCATAGATCTCCCACTGATTGGCTGTGGCTGAAAAGTTaGTCCTGGGAGGAGGCTCCGTCTGGCATTCTCGATCCCGGACAG +
Preference number: 6 (lower is better)
Translates to: HRHHRSPTDWLWLKS*SWEEAPSGILDPGQ
Trigger: CTGTCCGGGATCGAGAATGCCAGACGGAGCCTCCTCCCAGGACAAACTTTTCAGCCACAGCCAATCAGTGGGAGATCTATGATGCCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000488369.1
ENST00000614641.4
CDS TCA 72 bp GGGGTGCGTGTGGGTTGTTGGCTGTCAAAATCCGAGTaGACTCCTCCTTTAACTCCGCATCGGTCAACTCCA +
Preference number: 6 (lower is better)
Translates to: GVRVGCWLSKSE*TPPLTPHRSTP
Trigger: TGGAGTTGACCGATGCGGAGTTAAAGGAGGAGTTCACTCGGATTTTGACAGCCAACAACCCACACGCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000488369.1
ENST00000614641.4
CDS TCA 72 bp AGAAGAGTATGGCGCCCAGGCCACATCACCCACGGCTaGGTTCAGGTCATAGATGAACATCGGGGTCTTGAT +
Preference number: 6 (lower is better)
Translates to: RRVWRPGHITHG*VQVIDEHRGLD
Trigger: ATCAAGACCCCGATGTTCATCTATGACCTGAACTCAGCCGTGGGTGATGTGGCCTGGGCGCCATACTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS CCA 72 bp CACTACGGTAAACTCACAGTAGAGGAAACCAGTTCATaGGGTCCAGTTGCACAGATCTCCCTGCCCCTGGAG +
Preference number: 6 (lower is better)
Translates to: HYGKLTVEETSS*GPVAQISLPLE
Trigger: CTCCAGGGGCAGGGAGATCTGTGCAACTGGACCCCATGAACTGGTTTCCTCTACTGTGAGTTTACCGTAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470982.5
CDS TCA 72 bp GCATTCTCGATCCCGGACAGGGTTGTTGTAGGTCTGTaGGGCCCTCTCACTGAAGTTGAACTGGTTAGTGAG +
Preference number: 6 (lower is better)
Translates to: AFSIPDRVVVGL*GPLTEVELVSE
Trigger: CTCACTAACCAGTTCAACTTCAGTGAGAGGGCCTCACAGACCTACAACAACCCTGTCCGGGATCGAGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000488369.1
ENST00000614641.4
CDS TCA 72 bp ATAGGCATCATAGATCTCCCACTGATTGGCTGTGGCTaGAAAGTTTGTCCTGGGAGGAGGCTCCGTCTGGCA +
Preference number: 6 (lower is better)
Translates to: IGIIDLPLIGCG*KVCPGRRLRLA
Trigger: TGCCAGACGGAGCCTCCTCCCAGGACAAACTTTTCAGCCACAGCCAATCAGTGGGAGATCTATGATGCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000488369.1
ENST00000488790.1
ENST00000614641.4
CDS TCA 72 bp CTTGGTGTGGTATGGGTTCCAGGACACAGTGTCCACTaGCATGTTGTGGGCGTCATAGGTGTCGAGGAATTG +
Preference number: 6 (lower is better)
Translates to: LGVVWVPGHSVH*HVVGVIGVEEL
Trigger: CAATTCCTCGACACCTATGACGCCCACAACATGTCAGTGGACACTGTGTCCTGGAACCCATACCACACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000485580.1
ENST00000614641.4
CDS CAA 72 bp TTTTCCTTTGGCATCTTGCGCAAATTGGGTGAGAGCTaGAGGCTGATGATGTGCCCACGGTCATCGCCCACA +
Preference number: 6 (lower is better)
Translates to: FSFGILRKLGES*RLMMCPRSSPT
Trigger: TGTGGGCGATGACCGTGGGCACATCATCAGCCTCAAGCTCTCACCCAATTTGCGCAAGATGCCAAAGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242317.9
ENST00000614641.4
CDS CAA 90 bp TCTTTGAAGCTGTACCTGACAATGTTCTGGGGTGCGTGTGGGTTGTaGGCTGTCAAAATCCGAGTGAACTCCTCCTTTAACTCCGCATCG +
Preference number: 6 (lower is better)
Translates to: SLKLYLTMFWGACGL*AVKIRVNSSFNSAS
Trigger: CGATGCGGAGTTAAAGGAGGAGTTCACTCGGATTTTGACAGCCAACAACCCACACGCACCCCAGAACATTGTCAGGTACAGCTTCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000614641.4
CDS CAA 90 bp CCTTCTTTGAAGCTGTACCTGACAATGTTCTGGGGTGCGTGTGGGTaGTTGGCTGTCAAAATCCGAGTGAACTCCTCCTTTAACTCCGCA +
Preference number: 6 (lower is better)
Translates to: PSLKLYLTMFWGACG*LAVKIRVNSSFNSA
Trigger: TGCGGAGTTAAAGGAGGAGTTCACTCGGATTTTGACAGCCAACAACCCACACGCACCCCAGAACATTGTCAGGTACAGCTTCAAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000614641.4
CDS CAA 90 bp CATAGGCATCATAGATCTCCCACTGATTGGCTGTGGCTGAAAAGTTaGTCCTGGGAGGAGGCTCCGTCTGGCATTCTCGATCCTAAAGAA +
Preference number: 6 (lower is better)
Translates to: HRHHRSPTDWLWLKS*SWEEAPSGILDPKE
Trigger: TTCTTTAGGATCGAGAATGCCAGACGGAGCCTCCTCCCAGGACAAACTTTTCAGCCACAGCCAATCAGTGGGAGATCTATGATGCCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488790.1
CDS CCA 72 bp TTTGAAGCTGTACCTGACAATGTTCTGGGGTGCGTGTaGGTTGTTGGCTGTCAAAATCCGAGTGAACTCCTC +
Preference number: 6 (lower is better)
Translates to: FEAVPDNVLGCV*VVGCQNPSELL
Trigger: GAGGAGTTCACTCGGATTTTGACAGCCAACAACCCACACGCACCCCAGAACATTGTCAGGTACAGCTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000470982.5
ENST00000488369.1
ENST00000614641.4
CDS CAA 72 bp CTGTACCTGACAATGTTCTGGGGTGCGTGTGGGTTGTaGGCTGTCAAAATCCGAGTGAACTCCTCCTTTAAC +
Preference number: 6 (lower is better)
Translates to: LYLTMFWGACGL*AVKIRVNSSFN
Trigger: GTTAAAGGAGGAGTTCACTCGGATTTTGACAGCCAACAACCCACACGCACCCCAGAACATTGTCAGGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000470982.5
ENST00000488369.1
ENST00000614641.4
CDS CAA 72 bp GTCTTGATTTTCACTTCCCTCACCAGGTTCAGCAGTTaGTCCAGTTTCGCAATCTCCACAGCTGGACCCTTC +
Preference number: 6 (lower is better)
Translates to: VLIFTSLTRFSS*SSFAISTAGPF
Trigger: GAAGGGTCCAGCTGTGGAGATTGCGAAACTGGACAAACTGCTGAACCTGGTGAGGGAAGTGAAAATCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000442556.1
ENST00000614641.4
CDS CAA 90 bp GTCTTTGGGGATCAGGTTCCCAACCTGGGTGTAGTGAACTGCCAGTaGGTTCACAAAGCCAATAGGCTTATATGTGCCTTCCAAATCCTC +
Preference number: 6 (lower is better)
Translates to: VFGDQVPNLGVVNCQ*VHKANRLICAFQIL
Trigger: GAGGATTTGGAAGGCACATATAAGCCTATTGGCTTTGTGAACCAACTGGCAGTTCACTACACCCAGGTTGGGAACCTGATCCCCAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488369.1
CDS TCA 72 bp GTGCTGCCTTCCACCTTCAGCTTGATGACATCTATGTaGACCAGCTTTCTCTTCACGAGAGTCCAAGACACA +
Preference number: 6 (lower is better)
Translates to: VLPSTFSLMTSM*TSFLFTRVQDT
Trigger: TGTGTCTTGGACTCTCGTGAAGAGAAAGCTGGTTCACATAGATGTCATCAAGCTGAAGGTGGAAGGCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000470169.5
ENST00000614641.4
CDS CCA 72 bp AAGTTTGTCCGTCTCCTTGACCACACACAAGAAATCTaGACTCTCTTCCACTTCAGTTACCAGTCGCAACGG +
Preference number: 6 (lower is better)
Translates to: KFVRLLDHTQEI*TLFHFSYQSQR
Trigger: CCGTTGCGACTGGTAACTGAAGTGGAAGAGAGTCCAGATTTCTTGTGTGTGGTCAAGGAGACGGACAAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000614641.4
CDS CCA 72 bp TATGTGCCTTCTTTGAAGCTGTACCTGACAATGTTCTaGGGTGCGTGTGGGTTGTTGGCTGTCAAAATCCGA +
Preference number: 6 (lower is better)
Translates to: YVPSLKLYLTMF*GACGLLAVKIR
Trigger: TCGGATTTTGACAGCCAACAACCCACACGCACCCCAGAACATTGTCAGGTACAGCTTCAAAGAAGGCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000614641.4
CDS CCA 72 bp CTCCATTGCTTTTTGAAGCTGTACCTGACAATGTTCTaGGGTGCGTGTGGGTTGTTGGCTGTCAAAATCCGA +
Preference number: 6 (lower is better)
Translates to: LHCFLKLYLTMF*GACGLLAVKIR
Trigger: TCGGATTTTGACAGCCAACAACCCACACGCACCCCAGAACATTGTCAGGTACAGCTTCAAAAAGCAATGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000470982.5
ENST00000488369.1
CDS CAA 72 bp GATCAGGTTCCCAACCTGGGTGTAGTGAACTGCCAGTaGGTTCACAAAGCCAATAGGCTTATATGTGCCTTC +
Preference number: 6 (lower is better)
Translates to: DQVPNLGVVNCQ*VHKANRLICAF
Trigger: GAAGGCACATATAAGCCTATTGGCTTTGTGAACCAACTGGCAGTTCACTACACCCAGGTTGGGAACCTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000488369.1
ENST00000614641.4
CDS CAA 90 bp GTCTTTGGGGATCAGGTTCCCAACCTGGGTGTAGTGAACTGCCAGTaGGTTCACAAAGCCAATAGGCTTATATGTGCCTTCTTTGAAGCT +
Preference number: 6 (lower is better)
Translates to: VFGDQVPNLGVVNCQ*VHKANRLICAFFEA
Trigger: AGCTTCAAAGAAGGCACATATAAGCCTATTGGCTTTGTGAACCAACTGGCAGTTCACTACACCCAGGTTGGGAACCTGATCCCCAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000614641.4
CDS TCA 72 bp CTTCACGAGAGTCCAAGACACAATCCTGCCGTCAGATaGCACAGAGAAGAAGTTAAGGTTTTGGTCCATGTC +
Preference number: 6 (lower is better)
Translates to: LHESPRHNPAVR*HREEVKVLVHV
Trigger: GACATGGACCAAAACCTTAACTTCTTCTCTGTGTCATCTGACGGCAGGATTGTGTCTTGGACTCTCGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000470169.5
ENST00000614641.4
CDS TCA 72 bp CGTCTTCTTCGAGGTTTCCTGTTTCTGAAATCACCTTaGCAGACTCCTGAGAACCTTGGTAGGATACTGCCA +
Preference number: 6 (lower is better)
Translates to: RLLRGFLFLKSP*QTPENLGRILP
Trigger: TGGCAGTATCCTACCAAGGTTCTCAGGAGTCTGTCAAGGTGATTTCAGAAACAGGAAACCTCGAAGAAGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614641.4
CDS GCA 72 bp TTTGGGGATCAGGTTCCCAACCTGGGTGTAGTGAACTaGCAGTTGGTTCACAAAGCCAATAGGCTTATATGT +
Preference number: 6 (lower is better)
Translates to: FGDQVPNLGVVN*QLVHKANRLIC
Trigger: ACATATAAGCCTATTGGCTTTGTGAACCAACTGGCAGTTCACTACACCCAGGTTGGGAACCTGATCCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000488369.1
ENST00000614641.4
CDS CAA 72 bp CTCCCTCGTCTGAAGACAAAAAGTTTGTCCGTCTCCTaGACCACACACAAGAAATCTGGACTCTCTTCCACT +
Preference number: 6 (lower is better)
Translates to: LPRLKTKSLSVS*TTHKKSGLSST
Trigger: AGTGGAAGAGAGTCCAGATTTCTTGTGTGTGGTCAAGGAGACGGACAAACTTTTTGTCTTCAGACGAGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000614641.4
CDS CAA 90 bp TACAAAACGCTCCCTCGTCTGAAGACAAAAAGTTTGTCCGTCTCCTaGACCACACACAAGAAATCTGGACTCTCTTCCACTTCAGTTACC +
Preference number: 6 (lower is better)
Translates to: YKTLPRLKTKSLSVS*TTHKKSGLSSTSVT
Trigger: GGTAACTGAAGTGGAAGAGAGTCCAGATTTCTTGTGTGTGGTCAAGGAGACGGACAAACTTTTTGTCTTCAGACGAGGGAGCGTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000614641.4
CDS CAA 90 bp GAGGCCCTCTCACTGAAGTTGAACTGGTTAGTGAGCTTTCTCTCCTaGGGCTGCTTAGGAGTCATCAATTCTTCTTCAGTCACTTTTTCA +
Preference number: 6 (lower is better)
Translates to: EALSLKLNWLVSFLS*GCLGVINSSSVTFS
Trigger: TGAAAAAGTGACTGAAGAAGAATTGATGACTCCTAAGCAGCCCAAGGAGAGAAAGCTCACTAACCAGTTCAACTTCAGTGAGAGGGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000488369.1
ENST00000614641.4
CDS CAA 72 bp ATTCTGGTTGACCATCCGCTCCATGATCTTAGCAGCTaGGGACAATTTGATGAGATCATCAGTCTGAGACTC +
Preference number: 6 (lower is better)
Translates to: ILVDHPLHDLSS*GQFDEIISLRL
Trigger: GAGTCTCAGACTGATGATCTCATCAAATTGTCCCAAGCTGCTAAGATCATGGAGCGGATGGTCAACCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000614641.4
CDS CAA 72 bp TCACTGAAGTTGAACTGGTTAGTGAGCTTTCTCTCCTaGGGCTGCTTAGGAGTCATCAATTCTTCTTCAGTC +
Preference number: 6 (lower is better)
Translates to: SLKLNWLVSFLS*GCLGVINSSSV
Trigger: GACTGAAGAAGAATTGATGACTCCTAAGCAGCCCAAGGAGAGAAAGCTCACTAACCAGTTCAACTTCAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000488369.1
ENST00000614641.4
CDS CAA 90 bp ATCATATGTATTCTGGTTGACCATCCGCTCCATGATCTTAGCAGCTaGGGACAATTTGATGAGATCATCAGTCTGAGACTCCATAGATGT +
Preference number: 6 (lower is better)
Translates to: IICILVDHPLHDLSS*GQFDEIISLRLHRC
Trigger: ACATCTATGGAGTCTCAGACTGATGATCTCATCAAATTGTCCCAAGCTGCTAAGATCATGGAGCGGATGGTCAACCAGAATACATATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000614641.4
CDS GCA 72 bp AAGTTGAACTGGTTAGTGAGCTTTCTCTCCTTGGGCTaGTTAGGAGTCATCAATTCTTCTTCAGTCACTTTT +
Preference number: 6 (lower is better)
Translates to: KLNWLVSFLSLG*LGVINSSSVTF
Trigger: AAAAGTGACTGAAGAAGAATTGATGACTCCTAAGCAGCCCAAGGAGAGAAAGCTCACTAACCAGTTCAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242317.9
ENST00000437363.5
ENST00000488369.1
ENST00000614641.4