RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAH2 (Homo sapiens)

Ensembl gene IDs: ENSG00000183914

Ensembl transcript IDs: ENST00000389173.6, ENST00000570791.5, ENST00000572933.5, ENST00000574518.1, ENST00000575105.1, ENST00000575498.1

Found 2196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGCCTGCCTCTGCAGGCCTCCAGGAGTCAGCCGCGTCCCTGACCTaGTCGGGCATCGCGATGCGCTCGCCGTTGATGAGGGTCAACACC +
Preference number: 1 (lower is better)
Translates to: VPASAGLQESAASLT*SGIAMRSPLMRVNT
Trigger: GGTGTTGACCCTCATCAACGGCGAGCGCATCGCGATGCCCGAGCAGGTCAGGGACGCGGCTGACTCCTGGAGGCCTGCAGAGGCAGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 90 bp AGGACAGGGAGGCCTGTAGAATGCGCCATGAGGCAGTCTTGCCGCTaGCCGTGCAGCCCACGATCATGGTGGAGTGGCGGGAGTTCTTGG +
Preference number: 1 (lower is better)
Translates to: RTGRPVECAMRQSCR*PCSPRSWWSGGSSW
Trigger: CCAAGAACTCCCGCCACTCCACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCTACAGGCCTCCCTGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 90 bp ACAGAGAGGACAGGGAGGCCTGTAGAATGCGCCATGAGGCAGTCTTaGCGCTGCCCGTGCAGCCCACGATCATGGTGGAGTGGCGGGAGT +
Preference number: 1 (lower is better)
Translates to: TERTGRPVECAMRQS*RCPCSPRSWWSGGS
Trigger: ACTCCCGCCACTCCACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCTACAGGCCTCCCTGTCCTCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 90 bp GGGCCAGGTGGCAGTTCCGGAGAAGGTCCCGCAGGGTCACCCTCATaGTCTGTTCCACATCGCCAAGCCAGGACTCCACAGGGCCTTCTA +
Preference number: 1 (lower is better)
Translates to: GPGGSSGEGPAGSPS*SVPHRQARTPQGLL
Trigger: TAGAAGGCCCTGTGGAGTCCTGGCTTGGCGATGTGGAACAGACCATGAGGGTGACCCTGCGGGACCTTCTCCGGAACTGCCACCTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 90 bp TCCCTGAATCCAGGCATCCACCTTTCAGCTCTCTCCCACAGAACCTaGCCTGCTCTGAGATTTCTGGCTCTCCTCCCCAGCCCCGGCCCA +
Preference number: 1 (lower is better)
Translates to: SLNPGIHLSALSHRT*PALRFLALLPSPGP
Trigger: TGGGCCGGGGCTGGGGAGGAGAGCCAGAAATCTCAGAGCAGGGCAGGTTCTGTGGGAGAGAGCTGAAAGGTGGATGCCTGGATTCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 90 bp TCATACCTCTGGGTGCACAAACGAGGGTCCTGCCTCATGCATCCGTaGGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTAC +
Preference number: 1 (lower is better)
Translates to: SYLWVHKRGSCLMHP*ERAEEGRPSLHSAY
Trigger: GTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGCACCCAGAGGTATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 90 bp TTAGGTACGTGCATTTGTCCCTTCTCTCATCGCTCCAGGCCACCATaGTCCCAGGTACAGCTCTCCCGGCCTTGCAAGGTCCTCCCTGGC +
Preference number: 1 (lower is better)
Translates to: LGTCICPFSHRSRPP*SQVQLSRPCKVLPG
Trigger: GCCAGGGAGGACCTTGCAAGGCCGGGAGAGCTGTACCTGGGACCATGGTGGCCTGGAGCGATGAGAGAAGGGACAAATGCACGTACCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 90 bp GCCTGGGTCACACAGCCCTCCATTCTCCTAGAGCCCCAGCTCCCCTaGCCTGAGCCGATGATGGCCCTTATCCTTGTAGGGTACTATGTC +
Preference number: 1 (lower is better)
Translates to: AWVTQPSILLEPQLP*PEPMMALILVGYYV
Trigger: GACATAGTACCCTACAAGGATAAGGGCCATCATCGGCTCAGGTCAGGGGAGCTGGGGCTCTAGGAGAATGGAGGGCTGTGTGACCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 90 bp GGTCACACAGCCCTCCATTCTCCTAGAGCCCCAGCTCCCCTGACCTaGGCCGATGATGGCCCTTATCCTTGTAGGGTACTATGTCGAGCT +
Preference number: 1 (lower is better)
Translates to: GHTALHSPRAPAPLT*ADDGPYPCRVLCRA
Trigger: AGCTCGACATAGTACCCTACAAGGATAAGGGCCATCATCGGCTCAGGTCAGGGGAGCTGGGGCTCTAGGAGAATGGAGGGCTGTGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 90 bp GAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTGGAGTaGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGG +
Preference number: 1 (lower is better)
Translates to: EAVLPLPVQPTIMVE*REFLVSYNWKTLVR
Trigger: CCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTCCACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 90 bp GCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTaGAGTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGG +
Preference number: 1 (lower is better)
Translates to: AMRQSCRCPCSPRSW*SGGSSWFHTTGKPW
Trigger: CCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTCCACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 90 bp TGCGCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATaGTGGAGTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCT +
Preference number: 1 (lower is better)
Translates to: CAMRQSCRCPCSPRS*WSGGSSWFHTTGKP
Trigger: AGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTCCACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 90 bp CTCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTaGATTCATACCTCTGGGTGCACAAACGAGGGTCCTGCCTCATGC +
Preference number: 1 (lower is better)
Translates to: LALLEWVEKGVLASP*IHTSGCTNEGPASC
Trigger: GCATGAGGCAGGACCCTCGTTTGTGCACCCAGAGGTATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 90 bp GTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGGCGTGCTTTaGAGGCCCATGTCTCGAATCTCCTGCTCAACGGTCTCCCGCAGC +
Preference number: 1 (lower is better)
Translates to: VSYNWKTLVRVNGVL*RPMSRISCSTVSRS
Trigger: GCTGCGGGAGACCGTTGAGCAGGAGATTCGAGACATGGGCCTGCAAAGCACGCCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 90 bp CTCCCTGGCCCCCACCCTCCATTGTCTTCTTACTACTCAAGTCTCTaGCCACTGACTCCACTGTCCCAGCCCCGTACTCTAACAATGTTG +
Preference number: 1 (lower is better)
Translates to: LPGPHPPLSSYYSSL*PLTPLSQPRTLTML
Trigger: CAACATTGTTAGAGTACGGGGCTGGGACAGTGGAGTCAGTGGGCAGAGACTTGAGTAGTAAGAAGACAATGGAGGGTGGGGGCCAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 90 bp CCCACGATCATGGTGGAGTGGCGGGAGTTCTTGGTTTCATACAACTaGAAAACCTTGGTGAGGGTGAACGGCGTGCTTTGCAGGCCCATG +
Preference number: 1 (lower is better)
Translates to: PTIMVEWREFLVSYN*KTLVRVNGVLCRPM
Trigger: CATGGGCCTGCAAAGCACGCCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTCCACCATGATCGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 90 bp CTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTaGGGTCCGGCCTCAGTCCTAGGTGCAACATCTGTCTTAGCTCCT +
Preference number: 1 (lower is better)
Translates to: LQGHITQIRPRSKSE*GPASVLGATSVLAP
Trigger: AGGAGCTAAGACAGATGTTGCACCTAGGACTGAGGCCGGACCTCACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
3UTR TCA 90 bp ATCCCAAGCTCCACAATCTGCTCCAAGGTGAAGCTTTCAGATTCCTaGTCAAACTCCCGCTGGATCTCATCCCGGACCTGGTCCCAGTGC +
Preference number: 1 (lower is better)
Translates to: IPSSTICSKVKLSDS*SNSRWISSRTWSQC
Trigger: GCACTGGGACCAGGTCCGGGATGAGATCCAGCGGGAGTTTGATCAGGAATCTGAAAGCTTCACCTTGGAGCAGATTGTGGAGCTTGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 90 bp CACTCTCTTGCTCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTaGCAGTCCGTGAATTCATACCTCTGGGTGCACAAACGAGGGTCC +
Preference number: 1 (lower is better)
Translates to: HSLARIVGVGGKGCA*QSVNSYLWVHKRGS
Trigger: GGACCCTCGTTTGTGCACCCAGAGGTATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGAGCAAGAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 90 bp ACATCGCCAAGCCAGGACTCCACAGGGCCTTCTAAAAATACTGAGTaGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCCCCACA +
Preference number: 1 (lower is better)
Translates to: TSPSQDSTGPSKNTE*RKSMYSPSPENIPT
Trigger: TGTGGGGATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAGAAGGCCCTGTGGAGTCCTGGCTTGGCGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 90 bp GTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTaGGTGAGGTCCGGCCTCAGTCCTAGGTGCAACATCTGTCTTAGC +
Preference number: 1 (lower is better)
Translates to: VSPGPHHTNSAKVKV*VRSGLSPRCNICLS
Trigger: GCTAAGACAGATGTTGCACCTAGGACTGAGGCCGGACCTCACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
3UTR GCA 90 bp GCATCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTaGTTACAACAGAGGGTGTTTTTCTTATCATTGTTCTCAACAGCC +
Preference number: 1 (lower is better)
Translates to: ASVRTSRGGPPKPTQ*LQQRVFFLSLFSTA
Trigger: GGCTGTTGAGAACAATGATAAGAAAAACACCCTCTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 90 bp CCACAGGACCACACCAGATTTATTTCAAAGCCATCAAAATGGAAATaGGTGAGGCCGGCAGCCAGGGCAGACAGGATGCACAGGATCTGG +
Preference number: 1 (lower is better)
Translates to: PQDHTRFISKPSKWK*VRPAARADRMHRIW
Trigger: CCAGATCCTGTGCATCCTGTCTGCCCTGGCTGCCGGCCTCACCCATTTCCATTTTGATGGCTTTGAAATAAATCTGGTGTGGTCCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 90 bp GCGTTCCCAGTGGTCCACATCCTTCTCAAAGGCCTTGACAAAGCGTaGTGCCTTCATGGTAGACAGAGCTACCTGGTTATCTTCCAGTGC +
Preference number: 1 (lower is better)
Translates to: AFPVVHILLKGLDKA*CLHGRQSYLVIFQC
Trigger: GCACTGGAAGATAACCAGGTAGCTCTGTCTACCATGAAGGCATCACGCTTTGTCAAGGCCTTTGAGAAGGATGTGGACCACTGGGAACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 90 bp AAGATCCCACAGGACCACACCAGATTTATTTCAAAGCCATCAAAATaGAAATGGGTGAGGCCGGCAGCCAGGGCAGACAGGATGCACAGG +
Preference number: 1 (lower is better)
Translates to: KIPQDHTRFISKPSK*KWVRPAARADRMHR
Trigger: CCTGTGCATCCTGTCTGCCCTGGCTGCCGGCCTCACCCATTTCCATTTTGATGGCTTTGAAATAAATCTGGTGTGGTCCTGTGGGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 90 bp TCTCCACATGCTGATCCATCCCAAGCTCCACAATCTGCTCCAAGGTaGAGCTTTCAGATTCCTGATCAAACTCCCGCTGGATCTCATCCC +
Preference number: 1 (lower is better)
Translates to: SPHADPSQAPQSAPR*SFQIPDQTPAGSHP
Trigger: GGGATGAGATCCAGCGGGAGTTTGATCAGGAATCTGAAAGCTTCACCTTGGAGCAGATTGTGGAGCTTGGGATGGATCAGCATGTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 90 bp CAGAATCTTGCAGTTGCCAAAGCCCTCTCCAAAGAGAATGATTTCTaGAATGAGGGTGGAGTCAGGCACCACCATGGCAATTGGGCGGAA +
Preference number: 1 (lower is better)
Translates to: QNLAVAKALSKENDF*NEGGVRHHHGNWAE
Trigger: TTCCGCCCAATTGCCATGGTGGTGCCTGACTCCACCCTCATTGCAGAAATCATTCTCTTTGGAGAGGGCTTTGGCAACTGCAAGATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 90 bp AAATCACTCTCTTGCTCGCATTGTTGGAGTGGGTGGAAAAGGGTGTaGTTGCCAGTCCGTGAATTCATACCTCTGGGTGCACAAACGAGG +
Preference number: 1 (lower is better)
Translates to: KSLSCSHCWSGWKRV*LPVREFIPLGAQTR
Trigger: CCTCGTTTGTGCACCCAGAGGTATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGAGCAAGAGAGTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 90 bp AATGATTTCTGCAATGAGGGTGGAGTCAGGCACCACCATGGCAATTaGGCGGAACATGGATTTAAGATTTTCGGGAAGCTCTGTGCGGCC +
Preference number: 1 (lower is better)
Translates to: NDFCNEGGVRHHHGN*AEHGFKIFGKLCAA
Trigger: GGCCGCACAGAGCTTCCCGAAAATCTTAAATCCATGTTCCGCCCAATTGCCATGGTGGTGCCTGACTCCACCCTCATTGCAGAAATCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 90 bp TCCAGGATTGTATTCATTTCTATCAATGTGTCCAGGAGGCCTGGGTaGTGGGTGCTCCGGAGAGCATTGTTGTCCTTGTTCATCCTGTCC +
Preference number: 1 (lower is better)
Translates to: SRIVFISINVSRRPG*WVLRRALLSLFILS
Trigger: GGACAGGATGAACAAGGACAACAATGCTCTCCGGAGCACCCATCACCCAGGCCTCCTGGACACATTGATAGAAATGAATACAATCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 90 bp ATCATCTCAATAACCTCCAAAATGAGGGAGAGGCAGCGTTCCCAGTaGTCCACATCCTTCTCAAAGGCCTTGACAAAGCGTGATGCCTTC +
Preference number: 1 (lower is better)
Translates to: IISITSKMRERQRSQ*STSFSKALTKRDAF
Trigger: GAAGGCATCACGCTTTGTCAAGGCCTTTGAGAAGGATGTGGACCACTGGGAACGCTGCCTCTCCCTCATTTTGGAGGTTATTGAGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 90 bp GCAGGGTTCCGCAGGTCTGAGATGAGAGGCATGGTCCTCTTGAACTaGTCTATTTTTGAGCGAGTGGTTTCAATAATTTCCCAGTTTCGG +
Preference number: 1 (lower is better)
Translates to: AGFRRSEMRGMVLLN*SIFERVVSIISQFR
Trigger: CCGAAACTGGGAAATTATTGAAACCACTCGCTCAAAAATAGAGCAGTTCAAGAGGACCATGCCTCTCATCTCAGACCTGCGGAACCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 90 bp TCCTTGTTCATCCTGTCCATGATGGCTTTCCAGTTGCTGTTGACCTaGTCAAATAAGGTCGATTCATTGGGCAGCTGCTTGCGGATGTCT +
Preference number: 1 (lower is better)
Translates to: SLFILSMMAFQLLLT*SNKVDSLGSCLRMS
Trigger: AGACATCCGCAAGCAGCTGCCCAATGAATCGACCTTATTTGACCAGGTCAACAGCAACTGGAAAGCCATCATGGACAGGATGAACAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 90 bp AAGGCCTTGACAAAGCGTGATGCCTTCATGGTAGACAGAGCTACCTaGTTATCTTCCAGTGCCTGGAATACTTCTTCTGTACCTCTGAGA +
Preference number: 1 (lower is better)
Translates to: KALTKRDAFMVDRAT*LSSSAWNTSSVPLR
Trigger: TCTCAGAGGTACAGAAGAAGTATTCCAGGCACTGGAAGATAACCAGGTAGCTCTGTCTACCATGAAGGCATCACGCTTTGTCAAGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 90 bp ATCTTCCAGGATTGTATTCATTTCTATCAATGTGTCCAGGAGGCCTaGGTGATGGGTGCTCCGGAGAGCATTGTTGTCCTTGTTCATCCT +
Preference number: 1 (lower is better)
Translates to: IFQDCIHFYQCVQEA*VMGAPESIVVLVHP
Trigger: AGGATGAACAAGGACAACAATGCTCTCCGGAGCACCCATCACCCAGGCCTCCTGGACACATTGATAGAAATGAATACAATCCTGGAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 90 bp TCTTTAGTTGCTGAAGCAGAGATCTCCCCAATTTTCTCCACATGCTaGTCCATCCCAAGCTCCACAATCTGCTCCAAGGTGAAGCTTTCA +
Preference number: 1 (lower is better)
Translates to: SLVAEAEISPIFSTC*SIPSSTICSKVKLS
Trigger: TGAAAGCTTCACCTTGGAGCAGATTGTGGAGCTTGGGATGGATCAGCATGTGGAGAAAATTGGGGAGATCTCTGCTTCAGCAACTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 90 bp CAGTTGCTGTTGACCTGGTCAAATAAGGTCGATTCATTGGGCAGCTaGTTGCGGATGTCTTCTCCTAGGAAGATATTCTCTAAGTACATC +
Preference number: 1 (lower is better)
Translates to: QLLLTWSNKVDSLGS*LRMSSPRKIFSKYI
Trigger: GATGTACTTAGAGAATATCTTCCTAGGAGAAGACATCCGCAAGCAGCTGCCCAATGAATCGACCTTATTTGACCAGGTCAACAGCAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 90 bp GGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATaGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTC +
Preference number: 1 (lower is better)
Translates to: GCFTALSSNTTLSLL*LTQLGISRATSHKF
Trigger: GAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
3UTR CAA 90 bp CACAGAGAGGACAGGGAGGCCTGTAGAATGCGCCATGAGGCAGTCTaGCCGCTGCCCGTGCAGCCCACGATCATGGTGGAGTGGCGGGAG +
Preference number: 2 (lower is better)
Translates to: HREDREACRMRHEAV*PLPVQPTIMVEWRE
Trigger: CTCCCGCCACTCCACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCTACAGGCCTCCCTGTCCTCTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp GCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGAGCCGAGGAGGGCCGGGATCTGACTGGCAGTaGTCACCACCTGGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: AQTRVLPHASVRTSRGGPGSDWQ*SPPGQP
Trigger: GGGCTGGCCAGGTGGTGATCACTGCCAGTCAGATCC...CGGCCCTCCTCGGCTCGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGAGTCAGCCGCGTCCCTaGCCTGCTCGGGCATCGCGA +
Preference number: 2 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQSQPRP*PARASR
Trigger: TCGCGATGCCCGAGCAGGTCAGGGACGCGGCTGACT...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR GCA 90 bp GCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGAGCCGAGGAGGGCCGCCACAGCTTCCCATTTaGTGCTGGGCCCTCCAACCT +
Preference number: 2 (lower is better)
Translates to: AQTRVLPHASVRTSRGGPPQLPI*CWALQP
Trigger: AGGTTGGAGGGCCCAGCAGCAAATGGGAAGCTGTGG...CGGCCCTCCTCGGCTCGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGCGCTCCAGGCCACCATaGTCCCAGGTACAGCTCTCC +
Preference number: 2 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQRSRPP*SQVQLS
Trigger: GGAGAGCTGTACCTGGGACCATGGTGGCCTGGAGCG...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp CTCTGCCCACTGACTCCACTGTCCCAGCCCCGTACTCTAACAATGTaGAAGTTAGGGTCTCCGGCGCGGCACAGAGAGGACAGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: LCPLTPLSQPRTLTM*KLGSPARHREDREA
Trigger: GGCCTCCCTGTCCTCTCTGTGCCGCGCCGGAGACCCTAACTTCAACATTGTTAGAGTACGGGGCTGGGACAGTGGAGTCAGTGGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR GCA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGACCTTGGTCCCACTCTaGAGCCTGGGTCACACAGCC +
Preference number: 2 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQTLVPL*SLGHTA
Trigger: GGCTGTGTGACCCAGGCTGCAGAGTGGGACCAAGGT...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR GCA 90 bp GCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGAGCCGAGGAGGGCCGATGTCTCGAATCTCCTaGTCAACGGTCTCCCGCAGC +
Preference number: 2 (lower is better)
Translates to: AQTRVLPHASVRTSRGGPMSRIS*STVSRS
Trigger: GCTGCGGGAGACCGTTGAGCAGGAGATTCGAGACAT...CGGCCCTCCTCGGCTCGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp TCAGCCGCGTCCCTGACCTGCTCGGGCATCGCGATGCGCTCGCCGTaGATGAGGGTCAACACCTTGTTATCGTCCATGACGGAGTTCATG +
Preference number: 2 (lower is better)
Translates to: SAASLTCSGIAMRSP*MRVNTLLSSMTEFM
Trigger: CATGAACTCCGTCATGGACGATAACAAGGTGTTGACCCTCATCAACGGCGAGCGCATCGCGATGCCCGAGCAGGTCAGGGACGCGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp GCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGAGCCGAGGAGGGCCGCTTGCACGATGGCATTaGACAGGGGTGCATCAACTG +
Preference number: 2 (lower is better)
Translates to: AQTRVLPHASVRTSRGGPLARWH*TGVHQL
Trigger: CAGTTGATGCACCCCTGTTCAATGCCATCGTGCAAG...CGGCCCTCCTCGGCTCGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR GCA 90 bp CCTGCCCAACCTTGGTCCCACTCTGCAGCCTGGGTCACACAGCCCTCCATTCTCTCCATGGTTTCCGTCTaGAGGATCAGGAACCGGCCA +
Preference number: 2 (lower is better)
Translates to: PAQPWSHSAAWVTQPSILSMVSV*RIRNRP
Trigger: TGGCCGGTTCCTGATCCTGCAGACGGAAACCATGGA...GAGAATGGAGGGCTGTGTGACCCAGGCTGCAGAGTGGGACCAAGGTTGGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR GCA 90 bp AGAATGCGCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTGCAGCTTCCCATTTGCTaGTGGGCCCTCCAACCTTCT +
Preference number: 2 (lower is better)
Translates to: RMRHEAVLPLPVQPTIMVQLPIC*WALQPS
Trigger: AGAAGGTTGGAGGGCCCAGCAGCAAATGGGAAGCTG...CACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR GCA 90 bp CTGCTCGGGCATCGCGATGCGCTCGCCGTTGATGAGGGTCAACACCTTGTTATCCCAGGGCAGACAGGATaGACAGGATCTGGTGGGCCA +
Preference number: 2 (lower is better)
Translates to: LLGHRDALAVDEGQHLVIPGQTG*TGSGGP
Trigger: TGGCCCACCAGATCCTGTGCATCCTGTCTGCCCTGG...GATAACAAGGTGTTGACCCTCATCAACGGCGAGCGCATCGCGATGCCCGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR GCA 90 bp GTACGTGCATTTGTCCCTTCTCTCATCGCTCCAGGCCACCATGGTCCCAGGTACAGGCAGTCTTGCCGCTaGCCGTGCAGCCCACGATCA +
Preference number: 2 (lower is better)
Translates to: VRAFVPSLIAPGHHGPRYRQSCR*PCSPRS
Trigger: TGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCT...GTACCTGGGACCATGGTGGCCTGGAGCGATGAGAGAAGGGACAAATGCACGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp AACTCCCGCTGGATCTCATCCCGGACCTGGTCCCAGTGCCTCTCTCTAAGGGCAGGGCCGTGGTCTCCATaGTTTCCGTCTGCAGGATCA +
Preference number: 2 (lower is better)
Translates to: NSRWISSRTWSQCLSLRAGPWSP*FPSAGS
Trigger: TGATCCTGCAGACGGAAACCATGGAGACCACGGCCC...TGCCCTTAGAGAGAGGCACTGGGACCAGGTCCGGGATGAGATCCAGCGGGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp AGGGTCACCCTCATGGTCTGTTCCACATCGCCAAGCCAGGACTCCACAGGGCCTTCTGGGTTTCGGGACTaGCCCAGAATCTCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: RVTLMVCSTSPSQDSTGPSGFRD*PRISSR
Trigger: CCTGCTGGAGATTCTGGGCCAGTCCCGAAACCCAGA...AGGCCCTGTGGAGTCCTGGCTTGGCGATGTGGAACAGACCATGAGGGTGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp ATCACCACCTGGCCAGCCCACTCCTTCACCCATTTGTCCCTCTTGTaGAGGAACTTCCTGAGGGCCAGGTGGCAGTTCCGGAGAAGGTCC +
Preference number: 2 (lower is better)
Translates to: ITTWPAHSFTHLSLL*RNFLRARWQFRRRS
Trigger: GGACCTTCTCCGGAACTGCCACCTGGCCCTCAGGAAGTTCCTCAACAAGAGGGACAAATGGGTGAAGGAGTGGGCTGGCCAGGTGGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp GTGATCACCACCTGGCCAGCCCACTCCTTCACCCATTTGTCCCTCTaGTTGAGGAACTTCCTGAGGGCCAGGTGGCAGTTCCGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: VITTWPAHSFTHLSL*LRNFLRARWQFRRR
Trigger: CCTTCTCCGGAACTGCCACCTGGCCCTCAGGAAGTTCCTCAACAAGAGGGACAAATGGGTGAAGGAGTGGGCTGGCCAGGTGGTGATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp CCGCTGCCCGTGCAGCCCACGATCATGGTGGAGTGGCGGGAGTTCTaGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGGCGTG +
Preference number: 2 (lower is better)
Translates to: PLPVQPTIMVEWREF*VSYNWKTLVRVNGV
Trigger: CACGCCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTCCACCATGATCGTGGGCTGCACGGGCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp GCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGAGCCGAGGAGGGCCGCCTTCTCAAAGGCCTTaGCAAAGCGTGATGCCTTCA +
Preference number: 2 (lower is better)
Translates to: AQTRVLPHASVRTSRGGPPSQRP*QSVMPS
Trigger: TGAAGGCATCACGCTTTGTCAAGGCCTTTGAGAAGG...CGGCCCTCCTCGGCTCGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp ATCCACAGTGTGTCCACGGGGCCATCGAACAGGATCCACTTCTCGTCGGGTTTCGCCGTCCACTGGATCTaGCTGGCAGTGATCACCACC +
Preference number: 2 (lower is better)
Translates to: IHSVSTGPSNRIHFSSGFAVHWI*LAVITT
Trigger: GGTGGTGATCACTGCCAGTCAGATCCAGTGGACGGC...GAAACCCGACGAGAAGTGGATCCTGTTCGATGGCCCCGTGGACACACTGTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp CTGCTCGGGCATCGCGATGCGCTCGCCGTTGATGAGGGTCAACACCTTGTTATCTCAGCAGGCACTTGGTaGCATCAGCCGTCCACTGGA +
Preference number: 2 (lower is better)
Translates to: LLGHRDALAVDEGQHLVISAGTW*HQPSTG
Trigger: TCCAGTGGACGGCTGATGTCACCAAGTGCCTGCTGA...GATAACAAGGTGTTGACCCTCATCAACGGCGAGCGCATCGCGATGCCCGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGCTTCCCATTTGCTGCTaGGCCCTCCAACCTTCTGGA +
Preference number: 2 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQLPICC*ALQPSG
Trigger: TCCAGAAGGTTGGAGGGCCCAGCAGCAAATGGGAAG...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp GTACGTGCATTTGTCCCTTCTCTCATCGCTCCAGGCCACCATGGTCCCAGGTACAGGGTTCCGCAGGTCTaGGATGAGAGGCATGGTCCT +
Preference number: 2 (lower is better)
Translates to: VRAFVPSLIAPGHHGPRYRVPQV*DERHGP
Trigger: AGGACCATGCCTCTCATCTCAGACCTGCGGAACCCT...GTACCTGGGACCATGGTGGCCTGGAGCGATGAGAGAAGGGACAAATGCACGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGCAGGGGTGCATCAACTaGAGTGAGCTTGGCGATGTT +
Preference number: 2 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQQGCIN*SELGDV
Trigger: AACATCGCCAAGCTCACTTCAGTTGATGCACCCCTG...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR GCA 90 bp AGGGTCACCCTCATGGTCTGTTCCACATCGCCAAGCCAGGACTCCACAGGGCCTTTTTTGAGGTGTGGCTaGACAGCCTCTGGGTTTCGG +
Preference number: 2 (lower is better)
Translates to: RVTLMVCSTSPSQDSTGPFLRCG*TASGFR
Trigger: CCGAAACCCAGAGGCTGTGCAGCCACACCTCAAAAA...AGGCCCTGTGGAGTCCTGGCTTGGCGATGTGGAACAGACCATGAGGGTGACCCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp AGAATGCGCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTGCAGCTCTTTAGTTGCTaGAGCAGAGATCTCCCCAAT +
Preference number: 2 (lower is better)
Translates to: RMRHEAVLPLPVQPTIMVQLFSC*SRDLPN
Trigger: ATTGGGGAGATCTCTGCTTCAGCAACTAAAGAGCTG...CACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp GAGGCCACTCTTGTAAAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTGAGCCCCAGCTCCCCTaGCCTGAGCCGATGATGGCC +
Preference number: 2 (lower is better)
Translates to: EATLVKLLQHIPGMNFYREPQLP*PEPMMA
Trigger: GGCCATCATCGGCTCAGGTCAGGGGAGCTGGGGCTC...ACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTTTACAAGAGTGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp GGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGGCGTGCTTaGCAGGCCCATGTCTCGAATCTCCTGCTCAACGGTCTCCCGCAG +
Preference number: 2 (lower is better)
Translates to: GFIQLENLGEGERRA*QAHVSNLLLNGLPQ
Trigger: CTGCGGGAGACCGTTGAGCAGGAGATTCGAGACATGGGCCTGCAAAGCACGCCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp TGCTCGGGCATCGCGATGCGCTCGCCGTTGATGAGGGTCAACACCTaGTTATCGTCCATGACGGAGTTCATGTTCTCGATCCACAGTGTG +
Preference number: 2 (lower is better)
Translates to: CSGIAMRSPLMRVNT*LSSMTEFMFSIHSV
Trigger: CACACTGTGGATCGAGAACATGAACTCCGTCATGGACGATAACAAGGTGTTGACCCTCATCAACGGCGAGCGCATCGCGATGCCCGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp GTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGGCCAGCTCCCCTGACCTaGGCCGATGATGGCCCTTAT +
Preference number: 2 (lower is better)
Translates to: VAGVLGFIQLENLGEGERPAPLT*ADDGPY
Trigger: ATAAGGGCCATCATCGGCTCAGGTCAGGGGAGCTGG...CCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp GAGGCCACTCTTGTAAAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTTCCAGGAGGCCTGGGTaGTGGGTGCTCCGGAGAGCA +
Preference number: 2 (lower is better)
Translates to: EATLVKLLQHIPGMNFYRSRRPG*WVLRRA
Trigger: TGCTCTCCGGAGCACCCATCACCCAGGCCTCCTGGA...ACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTTTACAAGAGTGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGCCTTGTTATCGTCCATaGCGGAGTTCATGTTCTCGA +
Preference number: 2 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQPCYRP*RSSCSR
Trigger: TCGAGAACATGAACTCCGTCATGGACGATAACAAGG...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR GCA 90 bp AAAGGGTGTGCTTGCCAGTCCGTGAATTCATACCTCTGGGTGCACAAACGAGGGGGGAGGCCTGTAGAATaGGCCATGAGGCAGTCTTGC +
Preference number: 2 (lower is better)
Translates to: KGCACQSVNSYLWVHKRGGRPVE*AMRQSC
Trigger: GCAAGACTGCCTCATGGCGCATTCTACAGGCCTCCC...CCCTCGTTTGTGCACCCAGAGGTATGAATTCACGGACTGGCAAGCACACCCTTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp ACAGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTTGGCTGCACAGCCTCTaGGTTTCGGGACTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: TGSSMLGNRSCTMALNRGWLHSL*VSGLAQ
Trigger: CTGGGCCAGTCCCGAAACCCAGAGGCTGTGCAGCCA...ACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGAATTGCGTGTTGGTCTaGCGGATGACACAGTCATCA +
Preference number: 2 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQNCVLV*RMTQSS
Trigger: TGATGACTGTGTCATCCGCCAGACCAACACGCAATT...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp GTACGTGCATTTGTCCCTTCTCTCATCGCTCCAGGCCACCATGGTCCCAGGTACAGTACATTCGGCCCATaGACTTGTAGTCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: VRAFVPSLIAPGHHGPRYSTFGP*TCSPGP
Trigger: AGGGCCTGGACTACAAGTCCATGGGCCGAATGTACT...GTACCTGGGACCATGGTGGCCTGGAGCGATGAGAGAAGGGACAAATGCACGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp CTGCTCGGGCATCGCGATGCGCTCGCCGTTGATGAGGGTCAACACCTTGTTATCTCTAAGTACATCCACTaGCGCTGCACTGTGAGAATC +
Preference number: 2 (lower is better)
Translates to: LLGHRDALAVDEGQHLVISKYIH*RCTVRI
Trigger: GATTCTCACAGTGCAGCGTCAGTGGATGTACTTAGA...GATAACAAGGTGTTGACCCTCATCAACGGCGAGCGCATCGCGATGCCCGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGGTTCATATCTCTCATTaGGAGCAGCAGAACCTCTTC +
Preference number: 2 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQVHISH*EQQNLF
Trigger: GAAGAGGTTCTGCTGCTCTCAATGAGAGATATGAAC...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATAACAGCCCGTGGGCCGTaGTCTCCATGGTTTCCGTCT +
Preference number: 2 (lower is better)
Translates to: SHCWSGWKRVCLPVREFITARGP*SPWFPS
Trigger: AGACGGAAACCATGGAGACCACGGCCCACGGGCTGT...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp GTACGTGCATTTGTCCCTTCTCTCATCGCTCCAGGCCACCATGGTCCCAGGTACGTAGACAGAGCTACCTaGTTATCTTCCAGTGCCTGG +
Preference number: 2 (lower is better)
Translates to: VRAFVPSLIAPGHHGPRYVDRAT*LSSSAW
Trigger: CCAGGCACTGGAAGATAACCAGGTAGCTCTGTCTAC...GTACCTGGGACCATGGTGGCCTGGAGCGATGAGAGAAGGGACAAATGCACGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp AAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCACCAGAGCCACAATTGTGTCCAGGAGGCCTaGGTGATGGGTGCTCCGGAG +
Preference number: 2 (lower is better)
Translates to: KLLQHIPGMNFYRHQSHNCVQEA*VMGAPE
Trigger: CTCCGGAGCACCCATCACCCAGGCCTCCTGGACACA...ATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp ATCCACAGTGTGTCCACGGGGCCATCGAACAGGATCCACTTCTCGTCGGGTTTCGGCCCTCCAACCTTCTaGATTCTCAGCAACTTGATG +
Preference number: 2 (lower is better)
Translates to: IHSVSTGPSNRIHFSSGFGPPTF*ILSNLM
Trigger: CATCAAGTTGCTGAGAATCCAGAAGGTTGGAGGGCC...GAAACCCGACGAGAAGTGGATCCTGTTCGATGGCCCCGTGGACACACTGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp AGGGAGAGGCAGCGTTCCCAGTGGTCCACATCCTTCTCAAAGGCCTaGACAAAGCGTGATGCCTTCATGGTAGACAGAGCTACCTGGTTA +
Preference number: 2 (lower is better)
Translates to: RERQRSQWSTSFSKA*TKRDAFMVDRATWL
Trigger: TAACCAGGTAGCTCTGTCTACCATGAAGGCATCACGCTTTGTCAAGGCCTTTGAGAAGGATGTGGACCACTGGGAACGCTGCCTCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp ATGGTGGAGTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTaGGTGAGGGTGAACGGCGTGCTTTGCAGGCCCATGTCTCGAATC +
Preference number: 2 (lower is better)
Translates to: MVEWREFLVSYNWKT*VRVNGVLCRPMSRI
Trigger: GATTCGAGACATGGGCCTGCAAAGCACGCCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTCCACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp TCACTCTCTTGCTCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTaGCCAGTCCGTGAATTCATACCTCTGGGTGCACAAACGAGGGTC +
Preference number: 2 (lower is better)
Translates to: SLSCSHCWSGWKRVC*PVREFIPLGAQTRV
Trigger: GACCCTCGTTTGTGCACCCAGAGGTATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGAGCAAGAGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp GTACGTGCATTTGTCCCTTCTCTCATCGCTCCAGGCCACCATGGTCCCAGGTACAACACATCCCGGGCATaGATTTCTATCGTCACCAGA +
Preference number: 2 (lower is better)
Translates to: VRAFVPSLIAPGHHGPRYNTSRA*ISIVTR
Trigger: TCTGGTGACGATAGAAATTCATGCCCGGGATGTGTT...GTACCTGGGACCATGGTGGCCTGGAGCGATGAGAGAAGGGACAAATGCACGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR GCA 90 bp CCGGGCATGAATTTCTATCGTCACCAGAGCCACAATTTTAAGCCGCATGATCTTCGGACCTGGTCCCAGTaGCTCTCTCTAAGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: PGMNFYRHQSHNFKPHDLRTWSQ*LSLRAG
Trigger: CCCTGCCCTTAGAGAGAGGCACTGGGACCAGGTCCG...AAGATCATGCGGCTTAAAATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR GCA 90 bp TTCATACCTCTGGGTGCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGTCTTGGCCAGAATCTTaGAGTTGCCAAAGCCCTCTC +
Preference number: 2 (lower is better)
Translates to: FIPLGAQTRVLPHASVRTSWPES*SCQSPL
Trigger: GAGAGGGCTTTGGCAACTGCAAGATTCTGGCCAAGA...CGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGCACCCAGAGGTATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp AAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCACCAGAGCCACAATCGACGAAACAGCCCGTaGGCCGTGGTCTCCATGGTT +
Preference number: 2 (lower is better)
Translates to: KLLQHIPGMNFYRHQSHNRRNSP*AVVSMV
Trigger: AACCATGGAGACCACGGCCCACGGGCTGTTTCGTCG...ATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp GTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGGCCCCAAGCTCCAGTCTaGGCCAGACCTGAGTACATT +
Preference number: 2 (lower is better)
Translates to: VAGVLGFIQLENLGEGERPQAPV*ARPEYI
Trigger: AATGTACTCAGGTCTGGCCCAGACTGGAGCTTGGGG...CCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAAGCTCCTGGAGTCCCTaGCCCTCTCTCTCAAGCGGA +
Preference number: 2 (lower is better)
Translates to: LWLTQLGISRATSHKFGQSSWSP*PSLSSG
Trigger: TCCGCTTGAGAGAGAGGGTCAGGGACTCCAGGAGCT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
3UTR-3UTR TCA 90 bp AGAATGCGCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTGGAACTGCTCTATTTTTaGGCGAGTGGTTTCAATAAT +
Preference number: 2 (lower is better)
Translates to: RMRHEAVLPLPVQPTIMVELLYF*ASGFNN
Trigger: ATTATTGAAACCACTCGCTCAAAAATAGAGCAGTTC...CACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp TTCATACCTCTGGGTGCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGATTTTCTCCACATGCTaGTCCATCCCAAGCTCCACA +
Preference number: 2 (lower is better)
Translates to: FIPLGAQTRVLPHASVRTIFSTC*SIPSST
Trigger: TGTGGAGCTTGGGATGGATCAGCATGTGGAGAAAAT...CGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGCACCCAGAGGTATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp TTCATACCTCTGGGTGCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGATAAGGTCGATTCATTaGGCAGCTGCTTGCGGATGT +
Preference number: 2 (lower is better)
Translates to: FIPLGAQTRVLPHASVRTIRSIH*AAACGC
Trigger: ACATCCGCAAGCAGCTGCCCAATGAATCGACCTTAT...CGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGCACCCAGAGGTATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp AGAATGCGCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTGTCTAAAAATACTGAGTaGAGGAAGTCAATGTACTCG +
Preference number: 2 (lower is better)
Translates to: RMRHEAVLPLPVQPTIMVSKNTE*RKSMYS
Trigger: CGAGTACATTGACTTCCTCCACTCAGTATTTTTAGA...CACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp ACCCCTCTTTATTTCCAGACCCCTCTTAGGTACGTGCATTTGTCCCTTCTCTCAAGGATGCACAGGATCTaGTGGGCCACCACTGACAGC +
Preference number: 2 (lower is better)
Translates to: TPLYFQTPLRYVHLSLLSRMHRI*WATTDS
Trigger: GCTGTCAGTGGTGGCCCACCAGATCCTGTGCATCCT...TGAGAGAAGGGACAAATGCACGTACCTAAGAGGGGTCTGGAAATAAAGAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp CATGCCGTCCGCATGACACTGGACAAGATGCCATCTGTCCATTCATaGGTGCTGAGGTCATATTCCCCATACAGTTCCCCTAGGGACAAT +
Preference number: 2 (lower is better)
Translates to: HAVRMTLDKMPSVHS*VLRSYSPYSSPRDN
Trigger: ATTGTCCCTAGGGGAACTGTATGGGGAATATGACCTCAGCACCAATGAATGGACAGATGGCATCTTGTCCAGTGTCATGCGGACGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGAGCTCCTGGAGTCCCTaGCCCTCTCTCTCAAGCGGA +
Preference number: 2 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWSSWSP*PSLSSG
Trigger: TCCGCTTGAGAGAGAGGGTCAGGGACTCCAGGAGCT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
3UTR-3UTR TCA 90 bp TTCATACCTCTGGGTGCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGTCCATTCATTGGTGCTaGGGTCATATTCCCCATACA +
Preference number: 2 (lower is better)
Translates to: FIPLGAQTRVLPHASVRTSIHWC*GHIPHT
Trigger: TGTATGGGGAATATGACCTCAGCACCAATGAATGGA...CGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGCACCCAGAGGTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR GCA 90 bp GAGTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACTCGGTGCAGGTGCAATaGCGTGGTCAGTGTCATGTA +
Preference number: 2 (lower is better)
Translates to: EWREFLVSYNWKTLVRVNSVQVQ*RGQCHV
Trigger: TACATGACACTGACCACGGCATTGCACCTGCACCGA...GTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp GAGGCCACTCTTGTAAAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTATCTCATCCCGGACCTaGTCCCAGTGCCTCTCTCTA +
Preference number: 2 (lower is better)
Translates to: EATLVKLLQHIPGMNFYRISSRT*SQCLSL
Trigger: TAGAGAGAGGCACTGGGACCAGGTCCGGGATGAGAT...ACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTTTACAAGAGTGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATAAGGCAGCGTTCCCAGTaGTCCACATCCTTCTCAAAG +
Preference number: 2 (lower is better)
Translates to: SHCWSGWKRVCLPVREFIRQRSQ*STSFSK
Trigger: CTTTGAGAAGGATGTGGACCACTGGGAACGCTGCCT...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp ACAGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTGCAGGTGCAATGCCGTaGTCAGTGTCATGTAACACC +
Preference number: 2 (lower is better)
Translates to: TGSSMLGNRSCTMALNRGAGAMP*SVSCNT
Trigger: GGTGTTACATGACACTGACCACGGCATTGCACCTGC...ACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp ATCCACAGTGTGTCCACGGGGCCATCGAACAGGATCCACTTCTCGTCGGGTTTCAGTGGCGGGAGTTCTTaGTTTCATACAACTGGAAAA +
Preference number: 2 (lower is better)
Translates to: IHSVSTGPSNRIHFSSGFSGGSS*FHTTGK
Trigger: TTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACT...GAAACCCGACGAGAAGTGGATCCTGTTCGATGGCCCCGTGGACACACTGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp TTCAGGATTGACACCTGGTTCTTCTTCATGACCTTGAGGATTTTCTaGTCTGCCCGCTCCTTCGCTGTCAGCAGGCACTTGGTGACATCA +
Preference number: 2 (lower is better)
Translates to: FRIDTWFFFMTLRIF*SARSFAVSRHLVTS
Trigger: TGATGTCACCAAGTGCCTGCTGACAGCGAAGGAGCGGGCAGACAAGAAAATCCTCAAGGTCATGAAGAAGAACCAGGTGTCAATCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATACTTTGGCTAATTTTGTaGGGCGACGAAACAGCCCGT +
Preference number: 2 (lower is better)
Translates to: SHCWSGWKRVCLPVREFILWLIL*GDETAR
Trigger: ACGGGCTGTTTCGTCGCCTCACAAAATTAGCCAAAG...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp AGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTGCAAGCTTTCAGATTCCTaGTCAAACTCCCGCTGGATC +
Preference number: 2 (lower is better)
Translates to: RQLNVGKQILHDGIEQGCKLSDS*SNSRWI
Trigger: GATCCAGCGGGAGTTTGATCAGGAATCTGAAAGCTT...GCACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp AAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCACCAGAGCCACAATGGTACTATGTCGAGCTaGGTCACATCCCAGGTCTTG +
Preference number: 2 (lower is better)
Translates to: KLLQHIPGMNFYRHQSHNGTMSS*VTSQVL
Trigger: CAAGACCTGGGATGTGACTCAGCTCGACATAGTACC...ATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp TCTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCGGCCTTGACAAAGCGTaGTGCCTTCATGGTAGACAG +
Preference number: 2 (lower is better)
Translates to: SKNTEWRKSMYSPSPENIGLDKA*CLHGRQ
Trigger: CTGTCTACCATGAAGGCATCACGCTTTGTCAAGGCC...GATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp ACAGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTTGTTGGTCTGGCGGATaGCACAGTCATCAAGATCCT +
Preference number: 2 (lower is better)
Translates to: TGSSMLGNRSCTMALNRGCWSGG*HSHQDP
Trigger: AGGATCTTGATGACTGTGTCATCCGCCAGACCAACA...ACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR GCA 90 bp ACCCCTCTTTATTTCCAGACCCCTCTTAGGTACGTGCATTTGTCCCTTCTCTCAGAGGATTTTCTTGTCTaGCCGCTCCTTCGCTGTCAG +
Preference number: 2 (lower is better)
Translates to: TPLYFQTPLRYVHLSLLSEDFLV*PLLRCQ
Trigger: CTGACAGCGAAGGAGCGGGCAGACAAGAAAATCCTC...TGAGAGAAGGGACAAATGCACGTACCTAAGAGGGGTCTGGAAATAAAGAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR GCA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATATTTCTCATCTGCACATaGCGTCCGCATGACACTGGA +
Preference number: 2 (lower is better)
Translates to: SHCWSGWKRVCLPVREFIFLICT*RPHDTG
Trigger: TCCAGTGTCATGCGGACGGCATGTGCAGATGAGAAA...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp CTAAGGGCAGGGTTCCGCAGGTCTGAGATGAGAGGCATGGTCCTCTaGAACTGCTCTATTTTTGAGCGAGTGGTTTCAATAATTTCCCAG +
Preference number: 2 (lower is better)
Translates to: LRAGFRRSEMRGMVL*NCSIFERVVSIISQ
Trigger: CTGGGAAATTATTGAAACCACTCGCTCAAAAATAGAGCAGTTCAAGAGGACCATGCCTCTCATCTCAGACCTGCGGAACCCTGCCCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp TTGTTGTCCTTGTTCATCCTGTCCATGATGGCTTTCCAGTTGCTGTaGACCTGGTCAAATAAGGTCGATTCATTGGGCAGCTGCTTGCGG +
Preference number: 2 (lower is better)
Translates to: LLSLFILSMMAFQLL*TWSNKVDSLGSCLR
Trigger: CCGCAAGCAGCTGCCCAATGAATCGACCTTATTTGACCAGGTCAACAGCAACTGGAAAGCCATCATGGACAGGATGAACAAGGACAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp GACGAGCCGGCCCGAGTTACCCAAGTACTCATAATTATACTGAAATaGCGTGTTGGTCTGGCGGATGACACAGTCATCAAGATCCTTCTC +
Preference number: 2 (lower is better)
Translates to: DEPARVTQVLIIILK*RVGLADDTVIKILL
Trigger: GAGAAGGATCTTGATGACTGTGTCATCCGCCAGACCAACACGCAATTTCAGTATAATTATGAGTACTTGGGTAACTCGGGCCGGCTCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp GCAGTTGCCAAAGCCCTCTCCAAAGAGAATGATTTCTGCAATGAGGGTGGAGTCGAGGCATGGTCCTCTTaGACTGCTCTATTTTTGAGC +
Preference number: 2 (lower is better)
Translates to: AVAKALSKENDFCNEGGVEAWSS*TALFLS
Trigger: GCTCAAAAATAGAGCAGTTCAAGAGGACCATGCCTC...GACTCCACCCTCATTGCAGAAATCATTCTCTTTGGAGAGGGCTTTGGCAACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp AGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTGCCTTCTTCTGTACCTCTaGGACACAAGGGGTCAAAAT +
Preference number: 2 (lower is better)
Translates to: RQLNVGKQILHDGIEQGCLLLYL*DTRGQN
Trigger: ATTTTGACCCCTTGTGTCTCAGAGGTACAGAAGAAG...GCACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp GAGTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACTGTTCATCCTGTCCATaGTGGCTTTCCAGTTGCTGT +
Preference number: 2 (lower is better)
Translates to: EWREFLVSYNWKTLVRVNCSSCP*WLSSCC
Trigger: ACAGCAACTGGAAAGCCATCATGGACAGGATGAACA...GTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR GCA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATACCAAGCTCCACAATCTaGTCCAAGGTGAAGCTTTCA +
Preference number: 2 (lower is better)
Translates to: SHCWSGWKRVCLPVREFIPSSTI*SKVKLS
Trigger: TGAAAGCTTCACCTTGGAGCAGATTGTGGAGCTTGG...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp AGAGCATTGTTGTCCTTGTTCATCCTGTCCATGATGGCTTTCCAGTaGCTGTTGACCTGGTCAAATAAGGTCGATTCATTGGGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: RALLSLFILSMMAFQ*LLTWSNKVDSLGSC
Trigger: GCAGCTGCCCAATGAATCGACCTTATTTGACCAGGTCAACAGCAACTGGAAAGCCATCATGGACAGGATGAACAAGGACAACAATGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp TCTTGCACGATGGCATTGAACAGGGGTGCATCAACTGAAGTGAGCTaGGCGATGTTCATATCTCTCATTGAGAGCAGCAGAACCTCTTCA +
Preference number: 2 (lower is better)
Translates to: SCTMALNRGASTEVS*AMFISLIESSRTSS
Trigger: TGAAGAGGTTCTGCTGCTCTCAATGAGAGATATGAACATCGCCAAGCTCACTTCAGTTGATGCACCCCTGTTCAATGCCATCGTGCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp ATGACAGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATaGAACAGGGGTGCATCAACTGAAGTGAGCTTGGCGATGTTCATA +
Preference number: 2 (lower is better)
Translates to: MTGSSMLGNRSCTMA*NRGASTEVSLAMFI
Trigger: TATGAACATCGCCAAGCTCACTTCAGTTGATGCACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAAGGTCAAAGTCTGAGTaGGGTCCGGCCTCAGTCCTA +
Preference number: 2 (lower is better)
Translates to: NSFTFMANTTRYLQGHITRSKSE*GPASVL
Trigger: TAGGACTGAGGCCGGACCTCACTCAGACTTTGACCT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
3UTR-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGCCAAGGTCAAAGTCTaGGTGAGGTCCGGCCTCAGT +
Preference number: 2 (lower is better)
Translates to: NTTLSLLWLTQLGISRATAKVKV*VRSGLS
Trigger: ACTGAGGCCGGACCTCACTCAGACTTTGACCTTGGC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
3UTR-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGCCAAGGTCAAAGTCTaGGTGAGGTCCGGCCTCAGT +
Preference number: 2 (lower is better)
Translates to: FTFMANTTRYLQGHITQIAKVKV*VRSGLS
Trigger: ACTGAGGCCGGACCTCACTCAGACTTTGACCTTGGC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
3UTR-3UTR TCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACATTTGATTTTTGTTTTTaGGGCAGGGTCACTCTGTCG +
Preference number: 2 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATFDFCF*GRVTLS
Trigger: CGACAGAGTGACCCTGCCTCAAAAACAAAAATCAAA...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
3UTR-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGGCCTCAGTCCTAGGTaGAACATCTGTCTTAGCTCC +
Preference number: 2 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWGLSPR*NICLSS
Trigger: GGAGCTAAGACAGATGTTGCACCTAGGACTGAGGCC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
3UTR CAA 90 bp ATGGCTTTCCAGTTGCTGTTGACCTGGTCAAATAAGGTCGATTCATaGGGCAGCTGCTTGCGGATGTCTTCTCCTAGGAAGATATTCTCT +
Preference number: 2 (lower is better)
Translates to: MAFQLLLTWSNKVDS*GSCLRMSSPRKIFS
Trigger: AGAGAATATCTTCCTAGGAGAAGACATCCGCAAGCAGCTGCCCAATGAATCGACCTTATTTGACCAGGTCAACAGCAACTGGAAAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp CCCAAGCCTACACAGTGCTTACAACAGAGGGTGTTTTTCTTATCATaGTTCTCAACAGCCGCGGCAAGCAAAGCATTTTTCTTCAGCTGC +
Preference number: 2 (lower is better)
Translates to: PKPTQCLQQRVFFLS*FSTAAASKAFFFSC
Trigger: GCAGCTGAAGAAAAATGCTTTGCTTGCCGCGGCTGTTGAGAACAATGATAAGAAAAACACCCTCTGTTGTAAGCACTGTGTAGGCTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR GCA 90 bp CTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCCATGGTCCTCTTGAACTaGTCTATTTTTGAGCGAGTG +
Preference number: 2 (lower is better)
Translates to: LKILSGGSQCTRRRPRTSMVLLN*SIFERV
Trigger: CACTCGCTCAAAAATAGAGCAGTTCAAGAGGACCAT...GGATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp CCGGGCATGAATTTCTATCGTCACCAGAGCCACAATTTTAAGCCGCATGATCTTCAATCTGCTCCAAGGTaGAGCTTTCAGATTCCTGAT +
Preference number: 2 (lower is better)
Translates to: PGMNFYRHQSHNFKPHDLQSAPR*SFQIPD
Trigger: ATCAGGAATCTGAAAGCTTCACCTTGGAGCAGATTG...AAGATCATGCGGCTTAAAATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGGCCTCAGTCCTAGGTaGAACATCTGTCTTAGCTCC +
Preference number: 2 (lower is better)
Translates to: NTTLSLLWLTQLGISRATGLSPR*NICLSS
Trigger: GGAGCTAAGACAGATGTTGCACCTAGGACTGAGGCC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
3UTR-3UTR GCA 90 bp AAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCACCAGAGCCACAATCTGGTTATCTTCCAGTaGCTGGAATACTTCTTCTGT +
Preference number: 2 (lower is better)
Translates to: KLLQHIPGMNFYRHQSHNLVIFQ*LEYFFC
Trigger: ACAGAAGAAGTATTCCAGGCACTGGAAGATAACCAG...ATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp GAGGCCACTCTTGTAAAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCAGTTGCTGTTGACCTaGTCAAATAAGGTCGATTCA +
Preference number: 2 (lower is better)
Translates to: EATLVKLLQHIPGMNFYRQLLLT*SNKVDS
Trigger: TGAATCGACCTTATTTGACCAGGTCAACAGCAACTG...ACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTTTACAAGAGTGGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp AAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCACCAGAGCCACAATTTCAGGATTGACACCTaGTTCTTCTTCATGACCTTG +
Preference number: 2 (lower is better)
Translates to: KLLQHIPGMNFYRHQSHNFRIDT*FFFMTL
Trigger: CAAGGTCATGAAGAAGAACCAGGTGTCAATCCTGAA...ATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp CCGGGCATGAATTTCTATCGTCACCAGAGCCACAATTTTAAGCCGCATGATCTTTCACATCCCAGGTCTTaGCAATGTTTTGTAAAGCCA +
Preference number: 2 (lower is better)
Translates to: PGMNFYRHQSHNFKPHDLSHPRS*QCFVKP
Trigger: TGGCTTTACAAAACATTGCCAAGACCTGGGATGTGA...AAGATCATGCGGCTTAAAATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CCA 90 bp TCTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCTTATCTTCCAGTGCCTaGAATACTTCTTCTGTACCT +
Preference number: 2 (lower is better)
Translates to: SKNTEWRKSMYSPSPENILSSSA*NTSSVP
Trigger: AGGTACAGAAGAAGTATTCCAGGCACTGGAAGATAA...GATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp ACCCCTCTTTATTTCCAGACCCCTCTTAGGTACGTGCATTTGTCCCTTCTCTCAGGATTCTCAGCAACTTaGTGTTGTCAAAGCATTTTT +
Preference number: 2 (lower is better)
Translates to: TPLYFQTPLRYVHLSLLSGFSAT*CCQSIF
Trigger: AAAAATGCTTTGACAACATCAAGTTGCTGAGAATCC...TGAGAGAAGGGACAAATGCACGTACCTAAGAGGGGTCTGGAAATAAAGAGGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR TCA 90 bp CCGGGCATGAATTTCTATCGTCACCAGAGCCACAATTTTAAGCCGCATGATCTTATACTTATTCAGGATTaGCACCTGGTTCTTCTTCAT +
Preference number: 2 (lower is better)
Translates to: PGMNFYRHQSHNFKPHDLILIQD*HLVLLH
Trigger: ATGAAGAAGAACCAGGTGTCAATCCTGAATAAGTAT...AAGATCATGCGGCTTAAAATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 90 bp TGGTCTCTAAATACATATCCAGAGATTTCTGAATATCTTCCAGGATaGTATTCATTTCTATCAATGTGTCCAGGAGGCCTGGGTGATGGG +
Preference number: 2 (lower is better)
Translates to: WSLNTYPEISEYLPG*YSFLSMCPGGLGDG
Trigger: CCCATCACCCAGGCCTCCTGGACACATTGATAGAAATGAATACAATCCTGGAAGATATTCAGAAATCTCTGGATATGTATTTAGAGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp AGAATGCGCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTGGTGCCTGCAGGGCCTTaGGGGGAGCCCCCTCGGTGC +
Preference number: 3 (lower is better)
Translates to: RMRHEAVLPLPVQPTIMVVPAGP*GEPPRC
Trigger: GCACCGAGGGGGCTCCCCCAAAGGCCCTGCAGGCAC...CACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 72 bp TCTGCAGGCCTCCAGGAGTCAGCCGCGTCCCTGACCTaGTCGGGCATCGCGATGCGCTCGCCGTTGATGAGG +
Preference number: 3 (lower is better)
Translates to: SAGLQESAASLT*SGIAMRSPLMR
Trigger: CCTCATCAACGGCGAGCGCATCGCGATGCCCGAGCAGGTCAGGGACGCGGCTGACTCCTGGAGGCCTGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 72 bp AGGCCTGTAGAATGCGCCATGAGGCAGTCTTGCCGCTaGCCGTGCAGCCCACGATCATGGTGGAGTGGCGGG +
Preference number: 3 (lower is better)
Translates to: RPVECAMRQSCR*PCSPRSWWSGG
Trigger: CCCGCCACTCCACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCTACAGGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 72 bp TGGGTGCACAAACGAGGGTCCTGCCTCATGCATCCGTaGGAACGAGCCGAGGAGGGCCGCCCAAGCCTACAC +
Preference number: 3 (lower is better)
Translates to: WVHKRGSCLMHP*ERAEEGRPSLH
Trigger: GTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGCCCACCTGCCCAACCTaGGTCCCACTCTGCAGCCTG +
Preference number: 3 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQPTCPT*VPLCSL
Trigger: CAGGCTGCAGAGTGGGACCAAGGTTGGGCAGGTGGG...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGCCCACAGCTTCCCATTaGCTGCTGGGCCCTCCAACC +
Preference number: 3 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQPTASH*LLGPPT
Trigger: GGTTGGAGGGCCCAGCAGCAAATGGGAAGCTGTGGG...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 72 bp AGGGCCTTTGGGGGAGCCCCCTCGGTGCAGGTGCAATaGCGTGGTCAGTGTCATGTAACACCTGTCCGTCAG +
Preference number: 3 (lower is better)
Translates to: RAFGGAPSVQVQ*RGQCHVTPVRQ
Trigger: CTGACGGACAGGTGTTACATGACACTGACCACGGCATTGCACCTGCACCGAGGGGGCTCCCCCAAAGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp GCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGAGCCGAGGAGGGCCGTCATTGGGCAGCTGCTaGCGGATGTCTTCTCCTAGG +
Preference number: 3 (lower is better)
Translates to: AQTRVLPHASVRTSRGGPSLGSC*RMSSPR
Trigger: CCTAGGAGAAGACATCCGCAAGCAGCTGCCCAATGA...CGGCCCTCCTCGGCTCGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGGCTGTCAGCAGGCACTaGGTGACATCAGCCGTCCAC +
Preference number: 3 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQAVSRH*VTSAVH
Trigger: GTGGACGGCTGATGTCACCAAGTGCCTGCTGACAGC...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 72 bp AGCAGGCACTTGGTGACATCAGCCGTCCACTGGATCTaGCTGGCAGTGATCACCACCTGGCCAGCCCACTCC +
Preference number: 3 (lower is better)
Translates to: SRHLVTSAVHWI*LAVITTWPAHS
Trigger: GGAGTGGGCTGGCCAGGTGGTGATCACTGCCAGTCAGATCCAGTGGACGGCTGATGTCACCAAGTGCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 72 bp CGCCGTCGCCCGAGAACATCCCCACAGCTTCCCATTTaGTGCTGGGCCCTCCAACCTTCTGGATTCTCAGCA +
Preference number: 3 (lower is better)
Translates to: RRRPRTSPQLPI*CWALQPSGFSA
Trigger: TGCTGAGAATCCAGAAGGTTGGAGGGCCCAGCAGCAAATGGGAAGCTGTGGGGATGTTCTCGGGCGACGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 72 bp TGCATTTGTCCCTTCTCTCATCGCTCCAGGCCACCATaGTCCCAGGTACAGCTCTCCCGGCCTTGCAAGGTC +
Preference number: 3 (lower is better)
Translates to: CICPFSHRSRPP*SQVQLSRPCKV
Trigger: GACCTTGCAAGGCCGGGAGAGCTGTACCTGGGACCATGGTGGCCTGGAGCGATGAGAGAAGGGACAAATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp GCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGAGCCGAGGAGGGCCGTCCTTCTCAAAGGCCTaGACAAAGCGTGATGCCTTC +
Preference number: 3 (lower is better)
Translates to: AQTRVLPHASVRTSRGGPSFSKA*TKRDAF
Trigger: GAAGGCATCACGCTTTGTCAAGGCCTTTGAGAAGGA...CGGCCCTCCTCGGCTCGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp AGAATGCGCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTGCCAGTAGAACCGAAGTaGGCTGAGCCAGTCAAAGGA +
Preference number: 3 (lower is better)
Translates to: RMRHEAVLPLPVQPTIMVPVEPK*AEPVKG
Trigger: TCCTTTGACTGGCTCAGCCAACTTCGGTTCTACTGG...CACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGCTCCGGAGAGCATTGTaGTCCTTGTTCATCCTGTCC +
Preference number: 3 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQLRRAL*SLFILS
Trigger: GGACAGGATGAACAAGGACAACAATGCTCTCCGGAG...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 72 bp CGTCGCCCGAGAACATCCCCACAGCTTCCCATTTGCTaGTGGGCCCTCCAACCTTCTGGATTCTCAGCAACT +
Preference number: 3 (lower is better)
Translates to: RRPRTSPQLPIC*WALQPSGFSAT
Trigger: AGTTGCTGAGAATCCAGAAGGTTGGAGGGCCCAGCAGCAAATGGGAAGCTGTGGGGATGTTCTCGGGCGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 72 bp CAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTaGAGTGGCGGGAGTTCTTGGTTTCATACAACTGGA +
Preference number: 3 (lower is better)
Translates to: QSCRCPCSPRSW*SGGSSWFHTTG
Trigger: TCCAGTTGTATGAAACCAAGAACTCCCGCCACTCCACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 72 bp AGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATaGTGGAGTGGCGGGAGTTCTTGGTTTCATACAACT +
Preference number: 3 (lower is better)
Translates to: RQSCRCPCSPRS*WSGGSSWFHTT
Trigger: AGTTGTATGAAACCAAGAACTCCCGCCACTCCACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp AGAATGCGCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTGGAGTGGCGGGAGTTCTaGGTTTCATACAACTGGAAA +
Preference number: 3 (lower is better)
Translates to: RMRHEAVLPLPVQPTIMVEWREF*VSYNWK
Trigger: TTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTC...CACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGATGAGGGTCAACACCTaGTTATCGTCCATGACGGAG +
Preference number: 3 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQMRVNT*LSSMTE
Trigger: CTCCGTCATGGACGATAACAAGGTGTTGACCCTCAT...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 72 bp CCTAGGTGCAACATCTGTCTTAGCTCCTGGAGTCCCTaGCCCTCTCTCTCAAGCGGAGAAGAGGAGGAGGTC +
Preference number: 3 (lower is better)
Translates to: PRCNICLSSWSP*PSLSSGEEEEV
Trigger: GACCTCCTCCTCTTCTCCGCTTGAGAGAGAGGGTCAGGGACTCCAGGAGCTAAGACAGATGTTGCACCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
3UTR TCA 72 bp GGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTaGGTGAGGTCCGGCCTCAGTCCTAGGTGCAACATC +
Preference number: 3 (lower is better)
Translates to: GPHHTNSAKVKV*VRSGLSPRCNI
Trigger: GATGTTGCACCTAGGACTGAGGCCGGACCTCACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
3UTR TCA 72 bp CCAGTGCCTCTCTCTAAGGGCAGGGTTCCGCAGGTCTaGGATGAGAGGCATGGTCCTCTTGAACTGCTCTAT +
Preference number: 3 (lower is better)
Translates to: PVPLSKGRVPQV*DERHGPLELLY
Trigger: ATAGAGCAGTTCAAGAGGACCATGCCTCTCATCTCAGACCTGCGGAACCCTGCCCTTAGAGAGAGGCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 72 bp AACTGGAAAACCTTGGTGAGGGTGAACGGCGTGCTTTaGAGGCCCATGTCTCGAATCTCCTGCTCAACGGTC +
Preference number: 3 (lower is better)
Translates to: NWKTLVRVNGVL*RPMSRISCSTV
Trigger: GACCGTTGAGCAGGAGATTCGAGACATGGGCCTGCAAAGCACGCCGTTCACCCTCACCAAGGTTTTCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 72 bp AAAGGGTGTGCTTGCCAGTCCGTGAATTCATACCTCTaGGTGCACAAACGAGGGTCCTGCCTCATGCATCCG +
Preference number: 3 (lower is better)
Translates to: KGCACQSVNSYL*VHKRGSCLMHP
Trigger: CGGATGCATGAGGCAGGACCCTCGTTTGTGCACCCAGAGGTATGAATTCACGGACTGGCAAGCACACCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 72 bp CCCAGTTTCGGTCCTTATACTCTTTGGCTAATTTTGTaGGGCGACGAAACAGCCCGTGGGCCGTGGTCTCCA +
Preference number: 3 (lower is better)
Translates to: PSFGPYTLWLIL*GDETARGPWSP
Trigger: TGGAGACCACGGCCCACGGGCTGTTTCGTCGCCTCACAAAATTAGCCAAAGAGTATAAGGACCGAAACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 72 bp TTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTaGATTCATACCTCTGGGTGCACAAACGAGGGTCCT +
Preference number: 3 (lower is better)
Translates to: LEWVEKGVLASP*IHTSGCTNEGP
Trigger: AGGACCCTCGTTTGTGCACCCAGAGGTATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGTGTTCATATCTCTCATaGAGAGCAGCAGAACCTCTT +
Preference number: 3 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQCSYLS*RAAEPL
Trigger: AAGAGGTTCTGCTGCTCTCAATGAGAGATATGAACA...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp ATCCACAGTGTGTCCACGGGGCCATCGAACAGGATCCACTTCTCGTCGGGTTTCCCATCTGTCCATTCATaGGTGCTGAGGTCATATTCC +
Preference number: 3 (lower is better)
Translates to: IHSVSTGPSNRIHFSSGFPSVHS*VLRSYS
Trigger: GGAATATGACCTCAGCACCAATGAATGGACAGATGG...GAAACCCGACGAGAAGTGGATCCTGTTCGATGGCCCCGTGGACACACTGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 72 bp CACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTaGGGTCCGGCCTCAGTCCTAGGTGCAACATCTGTC +
Preference number: 3 (lower is better)
Translates to: HITQIRPRSKSE*GPASVLGATSV
Trigger: GACAGATGTTGCACCTAGGACTGAGGCCGGACCTCACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
3UTR TCA 72 bp TCCACAATCTGCTCCAAGGTGAAGCTTTCAGATTCCTaGTCAAACTCCCGCTGGATCTCATCCCGGACCTGG +
Preference number: 3 (lower is better)
Translates to: STICSKVKLSDS*SNSRWISSRTW
Trigger: CCAGGTCCGGGATGAGATCCAGCGGGAGTTTGATCAGGAATCTGAAAGCTTCACCTTGGAGCAGATTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 72 bp GCTCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTaGCAGTCCGTGAATTCATACCTCTGGGTGCACAAA +
Preference number: 3 (lower is better)
Translates to: ARIVGVGGKGCA*QSVNSYLWVHK
Trigger: TTTGTGCACCCAGAGGTATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 72 bp TCTTGCTCGCATTGTTGGAGTGGGTGGAAAAGGGTGTaGTTGCCAGTCCGTGAATTCATACCTCTGGGTGCA +
Preference number: 3 (lower is better)
Translates to: SCSHCWSGWKRV*LPVREFIPLGA
Trigger: TGCACCCAGAGGTATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGAGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 72 bp CAGGACCACACCAGATTTATTTCAAAGCCATCAAAATaGAAATGGGTGAGGCCGGCAGCCAGGGCAGACAGG +
Preference number: 3 (lower is better)
Translates to: QDHTRFISKPSK*KWVRPAARADR
Trigger: CCTGTCTGCCCTGGCTGCCGGCCTCACCCATTTCCATTTTGATGGCTTTGAAATAAATCTGGTGTGGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 72 bp ATGGTGGAGTGGCGGGAGTTCTTGGTTTCATACAACTaGAAAACCTTGGTGAGGGTGAACGGCGTGCTTTGC +
Preference number: 3 (lower is better)
Translates to: MVEWREFLVSYN*KTLVRVNGVLC
Trigger: GCAAAGCACGCCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTCCACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp AAAGGGTGTGCTTGCCAGTCCGTGAATTCATACCTCTGGGTGCACAAACGAGGGAGCCAGTCAAAGGAATaGACATCCATGAGGCCACTC +
Preference number: 3 (lower is better)
Translates to: KGCACQSVNSYLWVHKRGSQSKE*TSMRPL
Trigger: GAGTGGCCTCATGGATGTCAATTCCTTTGACTGGCT...CCCTCGTTTGTGCACCCAGAGGTATGAATTCACGGACTGGCAAGCACACCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp ATCCACAGTGTGTCCACGGGGCCATCGAACAGGATCCACTTCTCGTCGGGTTTCTCAACTGAAGTGAGCTaGGCGATGTTCATATCTCTC +
Preference number: 3 (lower is better)
Translates to: IHSVSTGPSNRIHFSSGFSTEVS*AMFISL
Trigger: GAGAGATATGAACATCGCCAAGCTCACTTCAGTTGA...GAAACCCGACGAGAAGTGGATCCTGTTCGATGGCCCCGTGGACACACTGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp AGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTGCACCCATTTGTCCCTCTaGTTGAGGAACTTCCTGAGG +
Preference number: 3 (lower is better)
Translates to: RQLNVGKQILHDGIEQGCTHLSL*LRNFLR
Trigger: CCTCAGGAAGTTCCTCAACAAGAGGGACAAATGGGT...GCACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATATACAACTGGAAAACCTaGGTGAGGGTGAACGGCGTG +
Preference number: 3 (lower is better)
Translates to: SHCWSGWKRVCLPVREFIYNWKT*VRVNGV
Trigger: CACGCCGTTCACCCTCACCAAGGTTTTCCAGTTGTA...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 72 bp GCTGATCCATCCCAAGCTCCACAATCTGCTCCAAGGTaGAGCTTTCAGATTCCTGATCAAACTCCCGCTGGA +
Preference number: 3 (lower is better)
Translates to: ADPSQAPQSAPR*SFQIPDQTPAG
Trigger: TCCAGCGGGAGTTTGATCAGGAATCTGAAAGCTTCACCTTGGAGCAGATTGTGGAGCTTGGGATGGATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 72 bp GCTGAAGCAGAGATCTCCCCAATTTTCTCCACATGCTaGTCCATCCCAAGCTCCACAATCTGCTCCAAGGTG +
Preference number: 3 (lower is better)
Translates to: AEAEISPIFSTC*SIPSSTICSKV
Trigger: CACCTTGGAGCAGATTGTGGAGCTTGGGATGGATCAGCATGTGGAGAAAATTGGGGAGATCTCTGCTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 72 bp TTTCTATCAATGTGTCCAGGAGGCCTGGGTGATGGGTaGTCCGGAGAGCATTGTTGTCCTTGTTCATCCTGT +
Preference number: 3 (lower is better)
Translates to: FLSMCPGGLGDG*SGEHCCPCSSC
Trigger: ACAGGATGAACAAGGACAACAATGCTCTCCGGAGCACCCATCACCCAGGCCTCCTGGACACATTGATAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 72 bp GCAGTTGCCAAAGCCCTCTCCAAAGAGAATGATTTCTaGAATGAGGGTGGAGTCAGGCACCACCATGGCAAT +
Preference number: 3 (lower is better)
Translates to: AVAKALSKENDF*NEGGVRHHHGN
Trigger: ATTGCCATGGTGGTGCCTGACTCCACCCTCATTGCAGAAATCATTCTCTTTGGAGAGGGCTTTGGCAACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 72 bp AAACCCCTCTTTATTTCCAGACCCCTCTTAGGTACGTaGATTTGTCCCTTCTCTCATCGCTCCAGGCCACCA +
Preference number: 3 (lower is better)
Translates to: KPLFISRPLLGT*ICPFSHRSRPP
Trigger: TGGTGGCCTGGAGCGATGAGAGAAGGGACAAATGCACGTACCTAAGAGGGGTCTGGAAATAAAGAGGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 72 bp AGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTaGTTACAACAGAGGGTGTTTTTCTTATCATTGTTC +
Preference number: 3 (lower is better)
Translates to: RTSRGGPPKPTQ*LQQRVFFLSLF
Trigger: GAACAATGATAAGAAAAACACCCTCTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 72 bp ATAACCTCCAAAATGAGGGAGAGGCAGCGTTCCCAGTaGTCCACATCCTTCTCAAAGGCCTTGACAAAGCGT +
Preference number: 3 (lower is better)
Translates to: ITSKMRERQRSQ*STSFSKALTKR
Trigger: ACGCTTTGTCAAGGCCTTTGAGAAGGATGTGGACCACTGGGAACGCTGCCTCTCCCTCATTTTGGAGGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 72 bp TGCAATGAGGGTGGAGTCAGGCACCACCATGGCAATTaGGCGGAACATGGATTTAAGATTTTCGGGAAGCTC +
Preference number: 3 (lower is better)
Translates to: CNEGGVRHHHGN*AEHGFKIFGKL
Trigger: GAGCTTCCCGAAAATCTTAAATCCATGTTCCGCCCAATTGCCATGGTGGTGCCTGACTCCACCCTCATTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp CTGCTCGGGCATCGCGATGCGCTCGCCGTTGATGAGGGTCAACACCTTGTTATCTGGATTCTCAGCAACTaGATGTTGTCAAAGCATTTT +
Preference number: 3 (lower is better)
Translates to: LLGHRDALAVDEGQHLVIWILSN*MLSKHF
Trigger: AAAATGCTTTGACAACATCAAGTTGCTGAGAATCCA...GATAACAAGGTGTTGACCCTCATCAACGGCGAGCGCATCGCGATGCCCGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp AAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCACCAGAGCCACAATCATTTGTCCCTCTTGTaGAGGAACTTCCTGAGGGCC +
Preference number: 3 (lower is better)
Translates to: KLLQHIPGMNFYRHQSHNHLSLL*RNFLRA
Trigger: GGCCCTCAGGAAGTTCCTCAACAAGAGGGACAAATG...ATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp ACCCCTCTTTATTTCCAGACCCCTCTTAGGTACGTGCATTTGTCCCTTCTCTCAACCTTGAGGATTTTCTaGTCTGCCCGCTCCTTCGCT +
Preference number: 3 (lower is better)
Translates to: TPLYFQTPLRYVHLSLLSTLRIF*SARSFA
Trigger: AGCGAAGGAGCGGGCAGACAAGAAAATCCTCAAGGT...TGAGAGAAGGGACAAATGCACGTACCTAAGAGGGGTCTGGAAATAAAGAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATACTTAGGTACGTGCATTaGTCCCTTCTCTCATCGCTC +
Preference number: 3 (lower is better)
Translates to: SHCWSGWKRVCLPVREFILRYVH*SLLSSL
Trigger: GAGCGATGAGAGAAGGGACAAATGCACGTACCTAAG...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 72 bp GTGGTCCACATCCTTCTCAAAGGCCTTGACAAAGCGTaGTGCCTTCATGGTAGACAGAGCTACCTGGTTATC +
Preference number: 3 (lower is better)
Translates to: VVHILLKGLDKA*CLHGRQSYLVI
Trigger: GATAACCAGGTAGCTCTGTCTACCATGAAGGCATCACGCTTTGTCAAGGCCTTTGAGAAGGATGTGGACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp GTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGGATGATGGCTTTCCAGTaGCTGTTGACCTGGTCAAAT +
Preference number: 3 (lower is better)
Translates to: VAGVLGFIQLENLGEGERMMAFQ*LLTWSN
Trigger: ATTTGACCAGGTCAACAGCAACTGGAAAGCCATCAT...CCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 72 bp ATCCTGTCCATGATGGCTTTCCAGTTGCTGTTGACCTaGTCAAATAAGGTCGATTCATTGGGCAGCTGCTTG +
Preference number: 3 (lower is better)
Translates to: ILSMMAFQLLLT*SNKVDSLGSCL
Trigger: CAAGCAGCTGCCCAATGAATCGACCTTATTTGACCAGGTCAACAGCAACTGGAAAGCCATCATGGACAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 72 bp GATTGTATTCATTTCTATCAATGTGTCCAGGAGGCCTaGGTGATGGGTGCTCCGGAGAGCATTGTTGTCCTT +
Preference number: 3 (lower is better)
Translates to: DCIHFYQCVQEA*VMGAPESIVVL
Trigger: AAGGACAACAATGCTCTCCGGAGCACCCATCACCCAGGCCTCCTGGACACATTGATAGAAATGAATACAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATACGGTCCTTATACTCTTaGGCTAATTTTGTGAGGCGA +
Preference number: 3 (lower is better)
Translates to: SHCWSGWKRVCLPVREFIRSLYS*ANFVRR
Trigger: TCGCCTCACAAAATTAGCCAAAGAGTATAAGGACCG...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp CCGGGCATGAATTTCTATCGTCACCAGAGCCACAATTTTAAGCCGCATGATCTTAATAAGGTCGATTCATaGGGCAGCTGCTTGCGGATG +
Preference number: 3 (lower is better)
Translates to: PGMNFYRHQSHNFKPHDLNKVDS*GSCLRM
Trigger: CATCCGCAAGCAGCTGCCCAATGAATCGACCTTATT...AAGATCATGCGGCTTAAAATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp GAGGCCACTCTTGTAAAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTTTGTCAAAGCATTTTTaGAGGTGTGGCTGCACAGCC +
Preference number: 3 (lower is better)
Translates to: EATLVKLLQHIPGMNFYRLSKHF*RCGCTA
Trigger: GGCTGTGCAGCCACACCTCAAAAAATGCTTTGACAA...ACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTTTACAAGAGTGGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp CCGGGCATGAATTTCTATCGTCACCAGAGCCACAATTTTAAGCCGCATGATCTTGCTTTCCAGTTGCTGTaGACCTGGTCAAATAAGGTC +
Preference number: 3 (lower is better)
Translates to: PGMNFYRHQSHNFKPHDLAFQLL*TWSNKV
Trigger: GACCTTATTTGACCAGGTCAACAGCAACTGGAAAGC...AAGATCATGCGGCTTAAAATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp ACAGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTTTCTTCTTCATGACCTaGAGGATTTTCTTGTCTGCC +
Preference number: 3 (lower is better)
Translates to: TGSSMLGNRSCTMALNRGFFFMT*RIFLSA
Trigger: GGCAGACAAGAAAATCCTCAAGGTCATGAAGAAGAA...ACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp AGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTGCATAATTATACTGAAATaGCGTGTTGGTCTGGCGGAT +
Preference number: 3 (lower is better)
Translates to: RQLNVGKQILHDGIEQGCIIILK*RVGLAD
Trigger: ATCCGCCAGACCAACACGCAATTTCAGTATAATTAT...GCACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 72 bp GAAAAATCACTCTCTTGCTCGCATTGTTGGAGTGGGTaGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATA +
Preference number: 3 (lower is better)
Translates to: EKSLSCSHCWSG*KRVCLPVREFI
Trigger: TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGAGCAAGAGAGTGATTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 72 bp CGCAGGTCTGAGATGAGAGGCATGGTCCTCTTGAACTaGTCTATTTTTGAGCGAGTGGTTTCAATAATTTCC +
Preference number: 3 (lower is better)
Translates to: RRSEMRGMVLLN*SIFERVVSIIS
Trigger: GGAAATTATTGAAACCACTCGCTCAAAAATAGAGCAGTTCAAGAGGACCATGCCTCTCATCTCAGACCTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR GCA 72 bp TTGACCTGGTCAAATAAGGTCGATTCATTGGGCAGCTaGTTGCGGATGTCTTCTCCTAGGAAGATATTCTCT +
Preference number: 3 (lower is better)
Translates to: LTWSNKVDSLGS*LRMSSPRKIFS
Trigger: AGAGAATATCTTCCTAGGAGAAGACATCCGCAAGCAGCTGCCCAATGAATCGACCTTATTTGACCAGGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR-3UTR CAA 90 bp TCTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCGGGAAAATATGTCGCTaGGTCTCTAAATACATATCC +
Preference number: 3 (lower is better)
Translates to: SKNTEWRKSMYSPSPENIGKICR*VSKYIS
Trigger: GGATATGTATTTAGAGACCAAGCGACATATTTTCCC...GATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR TCA 72 bp GATGAGAGGCATGGTCCTCTTGAACTGCTCTATTTTTaGGCGAGTGGTTTCAATAATTTCCCAGTTTCGGTC +
Preference number: 3 (lower is better)
Translates to: DERHGPLELLYF*ASGFNNFPVSV
Trigger: GACCGAAACTGGGAAATTATTGAAACCACTCGCTCAAAAATAGAGCAGTTCAAGAGGACCATGCCTCTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 72 bp ACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATaGCTAACACAACTAGGTATCTCCAGGGCCACATCA +
Preference number: 3 (lower is better)
Translates to: TALSSNTTLSLL*LTQLGISRATS
Trigger: TGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
3UTR TCA 72 bp TCTTCTCCTAGGAAGATATTCTCTAAGTACATCCACTaGCGCTGCACTGTGAGAATCATCTCAATAACCTCC +
Preference number: 3 (lower is better)
Translates to: SSPRKIFSKYIH*RCTVRIISITS
Trigger: GGAGGTTATTGAGATGATTCTCACAGTGCAGCGTCAGTGGATGTACTTAGAGAATATCTTCCTAGGAGAAGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CCA 72 bp TGGACAAGAAGTAGAAGCGGGGGAAAATATGTCGCTTaGTCTCTAAATACATATCCAGAGATTTCTGAATAT +
Preference number: 3 (lower is better)
Translates to: WTRSRSGGKYVA*SLNTYPEISEY
Trigger: ATATTCAGAAATCTCTGGATATGTATTTAGAGACCAAGCGACATATTTTCCCCCGCTTCTACTTCTTGTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp CCTGCCCAACCTTGGTCCCACTCTGCAGCCTGGGTCACACAGCCCTCCATTCTCAGTCAGCCGCGTCCCTaGCCTGCTCGGGCATCGCGA +
Preference number: 4 (lower is better)
Translates to: PAQPWSHSAAWVTQPSILSQPRP*PARASR
Trigger: TCGCGATGCCCGAGCAGGTCAGGGACGCGGCTGACT...GAGAATGGAGGGCTGTGTGACCCAGGCTGCAGAGTGGGACCAAGGTTGGGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp GCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGAGCCGAGGAGGGCCGCGGACCTGGTCCCAGTaGCTCTCTCTAAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AQTRVLPHASVRTSRGGPRTWSQ*LSLRAG
Trigger: CCCTGCCCTTAGAGAGAGGCACTGGGACCAGGTCCG...CGGCCCTCCTCGGCTCGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 72 bp GACAGGGAGGCCTGTAGAATGCGCCATGAGGCAGTCTaGCCGCTGCCCGTGCAGCCCACGATCATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: DREACRMRHEAV*PLPVQPTIMVE
Trigger: CTCCACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCTACAGGCCTCCCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp AGAATGCGCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTGCCACGAGCTGCAAGCTaGCCCCCAGTTCCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: RMRHEAVLPLPVQPTIMVPRAAS*PPVPPV
Trigger: CACTGGAGGAACTGGGGGTCAGCTTGCAGCTCGTGG...CACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp AGGGTCACCCTCATGGTCTGTTCCACATCGCCAAGCCAGGACTCCACAGGGCCTTCCAGGAGGCCTGGGTaGTGGGTGCTCCGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RVTLMVCSTSPSQDSTGPSRRPG*WVLRRA
Trigger: TGCTCTCCGGAGCACCCATCACCCAGGCCTCCTGGA...AGGCCCTGTGGAGTCCTGGCTTGGCGATGTGGAACAGACCATGAGGGTGACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp GCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGAGCCGAGGAGGGCCGACCTTGGTCCCACTCTaGAGCCTGGGTCACACAGCC +
Preference number: 4 (lower is better)
Translates to: AQTRVLPHASVRTSRGGPTLVPL*SLGHTA
Trigger: GGCTGTGTGACCCAGGCTGCAGAGTGGGACCAAGGT...CGGCCCTCCTCGGCTCGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp CCTGCCCAACCTTGGTCCCACTCTGCAGCCTGGGTCACACAGCCCTCCATTCTCTGTGTCCAGGAGGCCTaGGTGATGGGTGCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: PAQPWSHSAAWVTQPSILCVQEA*VMGAPE
Trigger: CTCCGGAGCACCCATCACCCAGGCCTCCTGGACACA...GAGAATGGAGGGCTGTGTGACCCAGGCTGCAGAGTGGGACCAAGGTTGGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp GGCCAGGTGGCAGTTCCGGAGAAGGTCCCGCAGGGTCACCCTCATGGTCTGTTCGCAGTGATCACCACCTaGCCAGCCCACTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: GQVAVPEKVPQGHPHGLFAVITT*PAHSFT
Trigger: GGTGAAGGAGTGGGCTGGCCAGGTGGTGATCACTGC...GAACAGACCATGAGGGTGACCCTGCGGGACCTTCTCCGGAACTGCCACCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp GGCCAGGTGGCAGTTCCGGAGAAGGTCCCGCAGGGTCACCCTCATGGTCTGTTCCAACCCACTCCCCGTTaGGACTGTCCAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: GQVAVPEKVPQGHPHGLFQPTPR*DCPASP
Trigger: TGGAGATGCTGGACAGTCTCAACGGGGAGTGGGTTG...GAACAGACCATGAGGGTGACCCTGCGGGACCTTCTCCGGAACTGCCACCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGTGCCTCATGCATCCGTaGGAACGAGCCGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQCLMHP*ERAEEG
Trigger: GCCCTCCTCGGCTCGTTCTCACGGATGCATGAGGCA...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp AGGGTCACCCTCATGGTCTGTTCCACATCGCCAAGCCAGGACTCCACAGGGCCTTGGCTGCACAGCCTCTaGGTTTCGGGACTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RVTLMVCSTSPSQDSTGPWLHSL*VSGLAQ
Trigger: CTGGGCCAGTCCCGAAACCCAGAGGCTGTGCAGCCA...AGGCCCTGTGGAGTCCTGGCTTGGCGATGTGGAACAGACCATGAGGGTGACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp AGAATGCGCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTGACATGTCCCAGGTCTTaGGGTAGTTCTGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RMRHEAVLPLPVQPTIMVTCPRS*GSSAAG
Trigger: GCCTGCTGCAGAACTACCTCAAGACCTGGGACATGT...CACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp CCTGCCCAACCTTGGTCCCACTCTGCAGCCTGGGTCACACAGCCCTCCATTCTCCTCCTCCCAGTCTCGTaGGATCTCCCAGATTTGCTG +
Preference number: 4 (lower is better)
Translates to: PAQPWSHSAAWVTQPSILLLPVS*DLPDLL
Trigger: CAGCAAATCTGGGAGATCGCACGAGACTGGGAGGAG...GAGAATGGAGGGCTGTGTGACCCAGGCTGCAGAGTGGGACCAAGGTTGGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp CCTGCCCAACCTTGGTCCCACTCTGCAGCCTGGGTCACACAGCCCTCCATTCTCCAGCTTCCCATTTGCTaGTGGGCCCTCCAACCTTCT +
Preference number: 4 (lower is better)
Translates to: PAQPWSHSAAWVTQPSILQLPIC*WALQPS
Trigger: AGAAGGTTGGAGGGCCCAGCAGCAAATGGGAAGCTG...GAGAATGGAGGGCTGTGTGACCCAGGCTGCAGAGTGGGACCAAGGTTGGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp GCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGAGCCGAGGAGGGCCGATTCATACCTCTGGGTaGACAAACGAGGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: AQTRVLPHASVRTSRGGPIHTSG*TNEGPA
Trigger: GGCAGGACCCTCGTTTGTGCACCCAGAGGTATGAAT...CGGCCCTCCTCGGCTCGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp AGAATGCGCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTGATCTCATCCCGGACCTaGTCCCAGTGCCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: RMRHEAVLPLPVQPTIMVISSRT*SQCLSL
Trigger: TAGAGAGAGGCACTGGGACCAGGTCCGGGATGAGAT...CACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTGCCCGCTGGGCGCATaGGCGGTAAGCCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSCPLGA*AVSLPR
Trigger: GCGCGGGAGGCTTACCGCCCATGCGCCCAGCGGGCA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTATGGGGGCCTGGCCCTaGCCCAGGGACAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSMGAWP*PRDRAW
Trigger: CCACGCCCTGTCCCTGGGCCAGGGCCAGGCCCCCAT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
3UTR CAA 72 bp TGGCCAGCCCACTCCTTCACCCATTTGTCCCTCTTGTaGAGGAACTTCCTGAGGGCCAGGTGGCAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: WPAHSFTHLSLL*RNFLRARWQFR
Trigger: CCGGAACTGCCACCTGGCCCTCAGGAAGTTCCTCAACAAGAGGGACAAATGGGTGAAGGAGTGGGCTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 72 bp TCCCTGACCTGCTCGGGCATCGCGATGCGCTCGCCGTaGATGAGGGTCAACACCTTGTTATCGTCCATGACG +
Preference number: 4 (lower is better)
Translates to: SLTCSGIAMRSP*MRVNTLLSSMT
Trigger: CGTCATGGACGATAACAAGGTGTTGACCCTCATCAACGGCGAGCGCATCGCGATGCCCGAGCAGGTCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGAAGAGACAGGAGGGTTaGGGCGCTGGTAGCGATGAA +
Preference number: 4 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQKRQEG*GAGSDE
Trigger: TTCATCGCTACCAGCGCCTCAACCCTCCTGTCTCTT...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp AGGGTCACCCTCATGGTCTGTTCCACATCGCCAAGCCAGGACTCCACAGGGCCTGTGCTTGCCAGTCCGTaGATTCATACCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RVTLMVCSTSPSQDSTGPVLASP*IHTSGC
Trigger: GCACCCAGAGGTATGAATTCACGGACTGGCAAGCAC...AGGCCCTGTGGAGTCCTGGCTTGGCGATGTGGAACAGACCATGAGGGTGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTGGGGCGAGAGACAGTaGGCCACCGCCCCGCAGGAC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLWGERQ*ATAPQD
Trigger: GTCCTGCGGGGCGGTGGCTCACTGTCTCTCGCCCCA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp AGAATGCGCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTGGAGGATTTTCTTGTCTaGCCGCTCCTTCGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: RMRHEAVLPLPVQPTIMVEDFLV*PLLRCQ
Trigger: CTGACAGCGAAGGAGCGGGCAGACAAGAAAATCCTC...CACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp AGGGTCACCCTCATGGTCTGTTCCACATCGCCAAGCCAGGACTCCACAGGGCCTATGTCTCGAATCTCCTaGTCAACGGTCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RVTLMVCSTSPSQDSTGPMSRIS*STVSRS
Trigger: GCTGCGGGAGACCGTTGAGCAGGAGATTCGAGACAT...AGGCCCTGTGGAGTCCTGGCTTGGCGATGTGGAACAGACCATGAGGGTGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp GGCCAGGTGGCAGTTCCGGAGAAGGTCCCGCAGGGTCACCCTCATGGTCTGTTCTTTCTCATCTGCACATaGCGTCCGCATGACACTGGA +
Preference number: 4 (lower is better)
Translates to: GQVAVPEKVPQGHPHGLFFLICT*RPHDTG
Trigger: TCCAGTGTCATGCGGACGGCATGTGCAGATGAGAAA...GAACAGACCATGAGGGTGACCCTGCGGGACCTTCTCCGGAACTGCCACCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGCCCCAAGCTCCAGTCTaGGCCAGACCTGAGTACATT +
Preference number: 4 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQPQAPV*ARPEYI
Trigger: AATGTACTCAGGTCTGGCCCAGACTGGAGCTTGGGG...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp CTGCTCGGGCATCGCGATGCGCTCGCCGTTGATGAGGGTCAACACCTTGTTATCATGCACAGGATCTGGTaGGCCACCACTGACAGCACC +
Preference number: 4 (lower is better)
Translates to: LLGHRDALAVDEGQHLVIMHRIW*ATTDST
Trigger: GGTGCTGTCAGTGGTGGCCCACCAGATCCTGTGCAT...GATAACAAGGTGTTGACCCTCATCAACGGCGAGCGCATCGCGATGCCCGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCTGCACGCGTCCCCATaGCAACCCCGGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLLHASP*QPRAGR
Trigger: CCTCCCTGCCCGGGGTTGCCATGGGGACGCGTGCAG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR TCA 90 bp GGCCAGGTGGCAGTTCCGGAGAAGGTCCCGCAGGGTCACCCTCATGGTCTGTTCCAGCTCTTTAGTTGCTaGAGCAGAGATCTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: GQVAVPEKVPQGHPHGLFQLFSC*SRDLPN
Trigger: ATTGGGGAGATCTCTGCTTCAGCAACTAAAGAGCTG...GAACAGACCATGAGGGTGACCCTGCGGGACCTTCTCCGGAACTGCCACCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp GTACGTGCATTTGTCCCTTCTCTCATCGCTCCAGGCCACCATGGTCCCAGGTACTGGAGTGCAGTGGCGTaGTCTTGGCTGACTGCAACC +
Preference number: 4 (lower is better)
Translates to: VRAFVPSLIAPGHHGPRYWSAVA*SWLTAT
Trigger: GGTTGCAGTCAGCCAAGATCACGCCACTGCACTCCA...GTACCTGGGACCATGGTGGCCTGGAGCGATGAGAGAAGGGACAAATGCACGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACAAGCAGAAGCACGCCGTaGGGCACGTCCCGCACCAAC +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATSRSTP*GTSRTN
Trigger: GTTGGTGCGGGACGTGCCGCACGGCGTGCTTCTGCT...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp CTCTTGTTGAGGAACTTCCTGAGGGCCAGGTGGCAGTTCCGGAGAAGGTCCCGCAGGGAGAACTTGAGGTaGGAACAGTCCAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: LLLRNFLRARWQFRRRSRRENLR*EQSSST
Trigger: TGTGCTGCTGGACTGTTCGCACCTCAAGTTCTCCCT...GCGGGACCTTCTCCGGAACTGCCACCTGGCCCTCAGGAAGTTCCTCAACAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp AGAATGCGCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTGTGCCATTCATTGCAGTaGTGCACCAGGGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: RMRHEAVLPLPVQPTIMVCHSLQ*CTRENL
Trigger: CAAGTTCTCCCTGGTGCAGCACTGCAATGAATGGCA...CACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp GTACGTGCATTTGTCCCTTCTCTCATCGCTCCAGGCCACCATGGTCCCAGGTACACGTTGGCCAAGTCGTaGTTCAGGGCATCCACGAGC +
Preference number: 4 (lower is better)
Translates to: VRAFVPSLIAPGHHGPRYTLAKS*FRASTS
Trigger: GCTCGTGGATGCCCTGAAGCACGACTTGGCCAACGT...GTACCTGGGACCATGGTGGCCTGGAGCGATGAGAGAAGGGACAAATGCACGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp AGAATGCGCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTGCTTCTTGAAGTCATCTaGCGAGTGGATCAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: RMRHEAVLPLPVQPTIMVLLEVI*RVDQAC
Trigger: ACAGGCCTGATCCACTCGGCAGATGACTTCAAGAAG...CACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp CCTGCCCAACCTTGGTCCCACTCTGCAGCCTGGGTCACACAGCCCTCCATTCTCGATTCATTGGGCAGCTaGTTGCGGATGTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PAQPWSHSAAWVTQPSILDSLGS*LRMSSP
Trigger: AGGAGAAGACATCCGCAAGCAGCTGCCCAATGAATC...GAGAATGGAGGGCTGTGTGACCCAGGCTGCAGAGTGGGACCAAGGTTGGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp GCAGTTGCCAAAGCCCTCTCCAAAGAGAATGATTTCTGCAATGAGGGTGGAGTCGGGGAGCCCCCTCGGTaGAGGTGCAATGCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: AVAKALSKENDFCNEGGVGEPPR*RCNAVV
Trigger: GACCACGGCATTGCACCTGCACCGAGGGGGCTCCCC...GACTCCACCCTCATTGCAGAAATCATTCTCTTTGGAGAGGGCTTTGGCAACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp ACCCCTCTTTATTTCCAGACCCCTCTTAGGTACGTGCATTTGTCCCTTCTCTCAGCCGCGTCCCTGACCTaGTCGGGCATCGCGATGCGC +
Preference number: 4 (lower is better)
Translates to: TPLYFQTPLRYVHLSLLSAASLT*SGIAMR
Trigger: GCGCATCGCGATGCCCGAGCAGGTCAGGGACGCGGC...TGAGAGAAGGGACAAATGCACGTACCTAAGAGGGGTCTGGAAATAAAGAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCCGCGCCCAGGTCTGTaGGCCCCAGCCGGAACGGGT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGPRPGL*APAGTG
Trigger: ACCCGTTCCGGCTGGGGCGCACAGACCTGGGCGCGG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCCACAGCAGCCCGAGTaGCCCGCCCTGACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEPQQPE*PALTSL
Trigger: CAAGCTGGTCAGGGCGGGCCACTCGGGCTGCTGTGG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AGGGTCACCCTCATGGTCTGTTCCACATCGCCAAGCCAGGACTCCACAGGGCCTTCCAGCAGAGTTTGTTaGAAGACAACCCACTCCCCG +
Preference number: 4 (lower is better)
Translates to: RVTLMVCSTSPSQDSTGPSSRVC*KTTHSP
Trigger: CGGGGAGTGGGTTGTCTTCCAACAAACTCTGCTGGA...AGGCCCTGTGGAGTCCTGGCTTGGCGATGTGGAACAGACCATGAGGGTGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTAGGCGGGCCAGACTCTaGCGTCCGCTGCCCCCGATA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSRRARL*RPLPPI
Trigger: TATCGGGGGCAGCGGACGCCAGAGTCTGGCCCGCCT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTGGAGCCGAGCAGCGATaGGGGCCTGGCCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLGAEQR*GPGPGP
Trigger: TGGGCCAGGGCCAGGCCCCCATCGCTGCTCGGCTCC...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTCCGCGCAGGCGCCCTaGATCCCTGCTTCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGSAQAP*IPASRP
Trigger: GGGCCGCGAAGCAGGGATCCAGGGCGCCTGCGCGGA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
3UTR CAA 72 bp GTGATCACCACCTGGCCAGCCCACTCCTTCACCCATTaGTCCCTCTTGTTGAGGAACTTCCTGAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VITTWPAHSFTH*SLLLRNFLRAR
Trigger: CCTGGCCCTCAGGAAGTTCCTCAACAAGAGGGACAAATGGGTGAAGGAGTGGGCTGGCCAGGTGGTGATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 72 bp CTGACTCCACTGTCCCAGCCCCGTACTCTAACAATGTaGAAGTTAGGGTCTCCGGCGCGGCACAGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: LTPLSQPRTLTM*KLGSPARHRED
Trigger: GTCCTCTCTGTGCCGCGCCGGAGACCCTAACTTCAACATTGTTAGAGTACGGGGCTGGGACAGTGGAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACCGAGTGGCCCGCCCTaGCCAGCTTGCCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQPSGPP*PACLGA
Trigger: AGCTCCCAGGCAAGCTGGTCAGGGCGGGCCACTCGG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGCCTTCTCAAAGGCCTTaGCAAAGCGTGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQPSQRP*QSVMPS
Trigger: TGAAGGCATCACGCTTTGTCAAGGCCTTTGAGAAGG...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTCCAGGAGGCCTGGGTaGTGGGTGCTCCGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLSRRPG*WVLRRA
Trigger: TGCTCTCCGGAGCACCCATCACCCAGGCCTCCTGGA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACCCCTCTTTATTTCCAGACCCCTCTTAGGTACGTGCATTTGTCCCTTCTCTCAGAGCCCCAGCTCCCCTaGCCTGAGCCGATGATGGCC +
Preference number: 4 (lower is better)
Translates to: TPLYFQTPLRYVHLSLLSEPQLP*PEPMMA
Trigger: GGCCATCATCGGCTCAGGTCAGGGGAGCTGGGGCTC...TGAGAGAAGGGACAAATGCACGTACCTAAGAGGGGTCTGGAAATAAAGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGCCGGGGCATTCCCCTaGTCCTGTGTGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEAGAFP*SCVATA
Trigger: TGCTGTGGCCACACAGGAGCAGGGGAATGCCCCGGC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTCTTGTTGAGGAACTTCCTGAGGGCCAGGTGGCAGTTCCGGAGAAGGTCCCGCTCTTGGCCAGAATCTTaGAGTTGCCAAAGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: LLLRNFLRARWQFRRRSRSWPES*SCQSPL
Trigger: GAGAGGGCTTTGGCAACTGCAAGATTCTGGCCAAGA...GCGGGACCTTCTCCGGAACTGCCACCTGGCCCTCAGGAAGTTCCTCAACAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp GCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGAGCCGAGGAGGGCCGTTGGGAAACAGATCTTaGACGATGGCATTGAACAGG +
Preference number: 4 (lower is better)
Translates to: AQTRVLPHASVRTSRGGPLGNRS*TMALNR
Trigger: CCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAA...CGGCCCTCCTCGGCTCGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACAGTGATCTCAGCTCACTaGAGCCTCTGCCTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATVISAH*SLCLPG
Trigger: GCCCGGGAGGCAGAGGCTGCAGTGAGCTGAGATCAC...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATATCCGGTGCCTGCCTCTaGAGGCCTCCAGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SHCWSGWKRVCLPVREFISGACL*RPPGVS
Trigger: GCTGACTCCTGGAGGCCTGCAGAGGCAGGCACCGGA...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTCTCGGGCCGGCGTCTaGACGCGTCCCCATGGCAAC +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSSRAGV*TRPHGN
Trigger: GTTGCCATGGGGACGCGTGCAGACGCCGGCCCGAGA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACACCTGACCAGCTTGCCTaGGAGCTTCCTCGGCCACTC +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATPDQLA*ELPRPL
Trigger: GAGTGGCCGAGGAAGCTCCCAGGCAAGCTGGTCAGG...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp AGAATGCGCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTGATGCCGCTGCTGATTTaGGTCTGGATCTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: RMRHEAVLPLPVQPTIMVMPLLI*VWIFLM
Trigger: CATCAAGAAGATCCAGACCCAAATCAGCAGCGGCAT...CACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp GTACGTGCATTTGTCCCTTCTCTCATCGCTCCAGGCCACCATGGTCCCAGGTACTCTGAGTCTCCACGTTaGCCAAGTCGTGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: VRAFVPSLIAPGHHGPRYSESPR*PSRASG
Trigger: CCCTGAAGCACGACTTGGCCAACGTGGAGACTCAGA...GTACCTGGGACCATGGTGGCCTGGAGCGATGAGAGAAGGGACAAATGCACGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp CTCTTGTTGAGGAACTTCCTGAGGGCCAGGTGGCAGTTCCGGAGAAGGTCCCGCGACACTGTCCTCGACTaGCACCTCGTACTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: LLLRNFLRARWQFRRRSRDTVLD*HLVLFK
Trigger: CTTGAAAAGTACGAGGTGCCAGTCGAGGACAGTGTC...GCGGGACCTTCTCCGGAACTGCCACCTGGCCCTCAGGAAGTTCCTCAACAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp ATCCACAGTGTGTCCACGGGGCCATCGAACAGGATCCACTTCTCGTCGGGTTTCCTTCCCATTTGCTGCTaGGCCCTCCAACCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: IHSVSTGPSNRIHFSSGFLPICC*ALQPSG
Trigger: TCCAGAAGGTTGGAGGGCCCAGCAGCAAATGGGAAG...GAAACCCGACGAGAAGTGGATCCTGTTCGATGGCCCCGTGGACACACTGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp GTACGTGCATTTGTCCCTTCTCTCATCGCTCCAGGCCACCATGGTCCCAGGTACGCAGGGTCACCCTCATaGTCTGTTCCACATCGCCAA +
Preference number: 4 (lower is better)
Translates to: VRAFVPSLIAPGHHGPRYAGSPS*SVPHRQ
Trigger: TTGGCGATGTGGAACAGACCATGAGGGTGACCCTGC...GTACCTGGGACCATGGTGGCCTGGAGCGATGAGAGAAGGGACAAATGCACGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp CTGCTCGGGCATCGCGATGCGCTCGCCGTTGATGAGGGTCAACACCTTGTTATCAGTACATTCGGCCCATaGACTTGTAGTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LLGHRDALAVDEGQHLVISTFGP*TCSPGP
Trigger: AGGGCCTGGACTACAAGTCCATGGGCCGAATGTACT...GATAACAAGGTGTTGACCCTCATCAACGGCGAGCGCATCGCGATGCCCGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp AGAATGCGCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTGGTGTGTACACCTTCTTaGCCAGAATCTTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: RMRHEAVLPLPVQPTIMVVCTPS*PESCSC
Trigger: GCAACTGCAAGATTCTGGCCAAGAAGGTGTACACAC...CACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp TTCATACCTCTGGGTGCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGTGCAGCCCACGATCATaGTGGAGTGGCGGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: FIPLGAQTRVLPHASVRTCSPRS*WSGGSS
Trigger: AGAACTCCCGCCACTCCACCATGATCGTGGGCTGCA...CGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGCACCCAGAGGTATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTACGAGCACCGACCACTaGCTGGAGGGCAGGGACTGC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSTSTDH*LEGRDC
Trigger: GCAGTCCCTGCCCTCCAGCCAGTGGTCGGTGCTCGT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGACGAGCACCGACCACTaGCTGGAGGGCAGGGACTGC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLTSTDH*LEGRDC
Trigger: GCAGTCCCTGCCCTCCAGCCAGTGGTCGGTGCTCGT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTGCCCGCTGGGCGCATaGGCGGTAAGCCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRCPLGA*AVSLPR
Trigger: GCGCGGGAGGCTTACCGCCCATGCGCCCAGCGGGCA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAAGGCCACGCGGTCCTaGCGCAGGGAGCGAACGATC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLKATRS*RRERTI
Trigger: GATCGTTCGCTCCCTGCGCCAGGACCGCGTGGCCTT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGCAGCAGGGCACTGGTaGGGTCCACACCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEAAGHW*GPHQGT
Trigger: TGTCCCCTGGTGTGGACCCCACCAGTGCCCTGCTGC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGGAGCCGAGCAGCGATaGGGGCCTGGCCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWGAEQR*GPGPGP
Trigger: TGGGCCAGGGCCAGGCCCCCATCGCTGCTCGGCTCC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCATACCTCTGGGTGCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGTCCCACTCTGCAGCCTaGGTCACACAGCCCTCCATT +
Preference number: 4 (lower is better)
Translates to: FIPLGAQTRVLPHASVRTSHSAA*VTQPSI
Trigger: AATGGAGGGCTGTGTGACCCAGGCTGCAGAGTGGGA...CGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGCACCCAGAGGTATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAACGGGTCCAGCAGATaGCGCCGGGCGCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRNGSSR*RRAPGR
Trigger: CCGGCCTGGCGCCCGGCGCCATCTGCTGGACCCGTT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGCAGCTCTGGCTCACTaGCAGCCGGGGCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSAALAH*QPGHSP
Trigger: AGGGGAATGCCCCGGCTGTCAGTGAGCCAGAGCTGC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACACAGCAAGGCAGGTCATaGCTCTGTCGATGCGACGCC +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATQQGRS*LCRCDA
Trigger: GGCGTCGCATCGACAGAGTCATGACCTGCCTTGCTG...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCCACGAGCTGCAAGCTaGCCCCCAGTTCCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSPRAAS*PPVPPV
Trigger: CACTGGAGGAACTGGGGGTCAGCTTGCAGCTCGTGG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGGCAAAATGGAAATGGGTaGGGCCGGCAGCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VAGVLGFIQLENLGEGERQNGNG*GRQPGQ
Trigger: CTGCCCTGGCTGCCGGCCTCACCCATTTCCATTTTG...CCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ATCCACAGTGTGTCCACGGGGCCATCGAACAGGATCCACTTCTCGTCGGGTTTCCAGGGGTGCATCAACTaGAGTGAGCTTGGCGATGTT +
Preference number: 4 (lower is better)
Translates to: IHSVSTGPSNRIHFSSGFQGCIN*SELGDV
Trigger: AACATCGCCAAGCTCACTTCAGTTGATGCACCCCTG...GAAACCCGACGAGAAGTGGATCCTGTTCGATGGCCCCGTGGACACACTGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp TTCATACCTCTGGGTGCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGCACATGCCGTCCGCATaGCACTGGACAAGATGCCAT +
Preference number: 4 (lower is better)
Translates to: FIPLGAQTRVLPHASVRTHMPSA*HWTRCH
Trigger: ATGGCATCTTGTCCAGTGTCATGCGGACGGCATGTG...CGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGCACCCAGAGGTATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTCAGGGCCTGGGCCTaGGGGTCGATCATCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEFRAWA*GSIISA
Trigger: GGCACTGATGATCGACCCTCAGGCCCAGGCCCTGAA...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCGGACCTGGTCCCAGTaGCTCTCTCTAAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSRTWSQ*LSLRAG
Trigger: CCCTGCCCTTAGAGAGAGGCACTGGGACCAGGTCCG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCCCCCTCGGTGCAGGTaGAATGCCGTGGTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLPPRCR*NAVVSV
Trigger: GACACTGACCACGGCATTGCACCTGCACCGAGGGGG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GAGTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACCCCCCTCGGTGCAGGTaGAATGCCGTGGTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: EWREFLVSYNWKTLVRVNPPRCR*NAVVSV
Trigger: GACACTGACCACGGCATTGCACCTGCACCGAGGGGG...GTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGGGAGCCCCCTCGGTaGAGGTGCAATGCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQGEPPR*RCNAVV
Trigger: GACCACGGCATTGCACCTGCACCGAGGGGGCTCCCC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GAGTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACAGGCAGTCTTGCCGCTaGCCGTGCAGCCCACGATCA +
Preference number: 4 (lower is better)
Translates to: EWREFLVSYNWKTLVRVNRQSCR*PCSPRS
Trigger: TGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCT...GTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGACTCTGGCGTCCGCTaGCCCCGATACCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSDSGVR*PRYPPG
Trigger: TCCTGGTGGGTATCGGGGGCAGCGGACGCCAGAGTC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGATGACTCAGGCACCTaGTCCACCCGGGCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLDDSGT*STRAWS
Trigger: AGACCAGGCCCGGGTGGAGCAGGTGCCTGAGTCATC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCTGCCTCTTGGCCTCTaGCCATGTGGGCTCGTTGCC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLLPLGL*PCGLVA
Trigger: GGCAACGAGCCCACATGGGCAGAGGCCAAGAGGCAG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGGACAGGAAGGCAGCTaGCAGGAGACAGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLGQEGS*QETVPH
Trigger: GTGGGGGACTGTCTCCTGGCAGCTGCCTTCCTGTCC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGGACAGGAAGGCAGCTaGCAGGAGACAGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSGQEGS*QETVPH
Trigger: GTGGGGGACTGTCTCCTGGCAGCTGCCTTCCTGTCC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGGAAGCGCTGGGCCATaGCCATGTGCTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLGSAGP*PCALPA
Trigger: AGCTGGCAGAGCACATGGGCATGGCCCAGCGCTTCC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTCTTGTTGAGGAACTTCCTGAGGGCCAGGTGGCAGTTCCGGAGAAGGTCCCGCGGAAAAGGGTGTGCTTaGCAGTCCGTGAATTCATAC +
Preference number: 4 (lower is better)
Translates to: LLLRNFLRARWQFRRRSRGKGCA*QSVNSY
Trigger: GTATGAATTCACGGACTGGCAAGCACACCCTTTTCC...GCGGGACCTTCTCCGGAACTGCCACCTGGCCCTCAGGAAGTTCCTCAACAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp AGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTGCCGACGAAACAGCCCGTaGGCCGTGGTCTCCATGGTT +
Preference number: 4 (lower is better)
Translates to: RQLNVGKQILHDGIEQGCRRNSP*AVVSMV
Trigger: AACCATGGAGACCACGGCCCACGGGCTGTTTCGTCG...GCACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp ATCCACAGTGTGTCCACGGGGCCATCGAACAGGATCCACTTCTCGTCGGGTTTCAGGCAGCGTTCCCAGTaGTCCACATCCTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: IHSVSTGPSNRIHFSSGFRQRSQ*STSFSK
Trigger: CTTTGAGAAGGATGTGGACCACTGGGAACGCTGCCT...GAAACCCGACGAGAAGTGGATCCTGTTCGATGGCCCCGTGGACACACTGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp AGGGTCACCCTCATGGTCTGTTCCACATCGCCAAGCCAGGACTCCACAGGGCCTATAAGGTCGATTCATTaGGCAGCTGCTTGCGGATGT +
Preference number: 4 (lower is better)
Translates to: RVTLMVCSTSPSQDSTGPIRSIH*AAACGC
Trigger: ACATCCGCAAGCAGCTGCCCAATGAATCGACCTTAT...AGGCCCTGTGGAGTCCTGGCTTGGCGATGTGGAACAGACCATGAGGGTGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGCACCGACCACTGGCTaGAGGGCAGGGACTGCAGAA +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEAPTTG*RAGTAE
Trigger: TTCTGCAGTCCCTGCCCTCCAGCCAGTGGTCGGTGC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGACATGCAGAGGGACTTaGCAGCCAGGGAGACGCGGC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLTCRGT*QPGRRG
Trigger: GCCGCGTCTCCCTGGCTGCCAAGTCCCTCTGCATGT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATCCCGCAGCTTCTCCTaGGCCTCAGCGAGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQSRSFS*ASASAA
Trigger: AGCCGCGCTCGCTGAGGCCCAGGAGAAGCTGCGGGA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCCAGCAGGGAGCCGGTaGCCTCATTCAGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSPAGSR*PHSAAA
Trigger: TGCGGCTGCTGAATGAGGCCACCGGCTCCCTGCTGG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAATGGGGGCCTGGCCCTaGCCCAGGGACAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITMGAWP*PRDRAW
Trigger: CCACGCCCTGTCCCTGGGCCAGGGCCAGGCCCCCAT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGAGGCCGGGCCCGGCTaGCCCACAGCTCAAACTGCT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGEAGPG*PTAQTA
Trigger: AGCAGTTTGAGCTGTGGGCCAGCCGGGCCCGGCCTC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCAGTTGCCAAAGCCCTCTCCAAAGAGAATGATTTCTGCAATGAGGGTGGAGTCCGCTCCAGGCCACCATaGTCCCAGGTACAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: AVAKALSKENDFCNEGGVRSRPP*SQVQLS
Trigger: GGAGAGCTGTACCTGGGACCATGGTGGCCTGGAGCG...GACTCCACCCTCATTGCAGAAATCATTCTCTTTGGAGAGGGCTTTGGCAACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 72 bp CAACTGGAAAACCTTGGTGAGGGTGAACGGCGTGCTTaGCAGGCCCATGTCTCGAATCTCCTGCTCAACGGT +
Preference number: 4 (lower is better)
Translates to: QLENLGEGERRA*QAHVSNLLLNG
Trigger: ACCGTTGAGCAGGAGATTCGAGACATGGGCCTGCAAAGCACGCCGTTCACCCTCACCAAGGTTTTCCAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp CTAGTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGGCAGCTCTGGCTCACTaGCAGCCGGGGCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: LVAEQRHHWFSQIVEWFLAALAH*QPGHSP
Trigger: AGGGGAATGCCCCGGCTGTCAGTGAGCCAGAGCTGC...CAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCACTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACACGAAGTTCTCCCAGGTaGTGGGAACTGGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATRSSPR*WELVLG
Trigger: GCCAAGCACCAGTTCCCATCACCTGGGAGAACTTCG...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACAGCCAACAGGTGTTCTTaGCATCCAGGATACCCCCGC +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATANRCS*HPGYPR
Trigger: GCGGGGGTATCCTGGATGTCAAGAACACCTGTTGGC...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACAATACGGGGCAGGAAATaGGCACCAGCAAGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATIRGRK*APARQV
Trigger: GACCTGCCTTGCTGGTGCTCATTTCCTGCCCCGTAT...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACACCGCCTTCTCCTGGCTaGTTCGCAGCAATGGGGTAT +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATPPSPG*FAAMGY
Trigger: ATACCCCATTGCTGCGAATCAGCCAGGAGAAGGCGG...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp GTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGGGCACCAGGGAGAACTTaGGGTGCGAACAGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VAGVLGFIQLENLGEGERAPGRT*GANSPA
Trigger: TGCTGGACTGTTCGCACCTCAAGTTCTCCCTGGTGC...CCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCCACGAGCTGCAAGCTaGCCCCCAGTTCCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSPRAAS*PPVPPV
Trigger: CACTGGAGGAACTGGGGGTCAGCTTGCAGCTCGTGG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGGATCTGACTGGCAGTaGTCACCACCTGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSGSDWQ*SPPGQP
Trigger: GGGCTGGCCAGGTGGTGATCACTGCCAGTCAGATCC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TCTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCGGATCTGACTGGCAGTaGTCACCACCTGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SKNTEWRKSMYSPSPENIGSDWQ*SPPGQP
Trigger: GGGCTGGCCAGGTGGTGATCACTGCCAGTCAGATCC...GATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGCCGTCCACTGGATCTaGCTGGCAGTGATCACCACC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEAVHWI*LAVITT
Trigger: GGTGGTGATCACTGCCAGTCAGATCCAGTGGACGGC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GAGTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGCCGTCCACTGGATCTaGCTGGCAGTGATCACCACC +
Preference number: 4 (lower is better)
Translates to: EWREFLVSYNWKTLVRVNAVHWI*LAVITT
Trigger: GGTGGTGATCACTGCCAGTCAGATCCAGTGGACGGC...GTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp AGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTGCTCAGCAGGCACTTGGTaGCATCAGCCGTCCACTGGA +
Preference number: 4 (lower is better)
Translates to: RQLNVGKQILHDGIEQGCSAGTW*HQPSTG
Trigger: TCCAGTGGACGGCTGATGTCACCAAGTGCCTGCTGA...GCACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp GTACGTGCATTTGTCCCTTCTCTCATCGCTCCAGGCCACCATGGTCCCAGGTACTGTTGGTCTGGCGGATaGCACAGTCATCAAGATCCT +
Preference number: 4 (lower is better)
Translates to: VRAFVPSLIAPGHHGPRYCWSGG*HSHQDP
Trigger: AGGATCTTGATGACTGTGTCATCCGCCAGACCAACA...GTACCTGGGACCATGGTGGCCTGGAGCGATGAGAGAAGGGACAAATGCACGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCAAAATGGAAATGGGTaGGGCCGGCAGCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEQNGNG*GRQPGQ
Trigger: CTGCCCTGGCTGCCGGCCTCACCCATTTCCATTTTG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGTAGTCGCAGATGGATaGAGCCAGGCGGGCCAGACT +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSVVADG*SQAGQT
Trigger: AGTCTGGCCCGCCTGGCTTCATCCATCTGCGACTAC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTTCAGGGCCTGGGCCTaGGGGTCGATCATCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSFRAWA*GSIISA
Trigger: GGCACTGATGATCGACCCTCAGGCCCAGGCCCTGAA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAACACCCAGTGTCCCTaGGTCACACCCTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSENTQCP*VTPSRR
Trigger: CCTCCGAGAGGGTGTGACTCAGGGACACTGGGTGTT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGCGGAAGGATGGATaGGGATCCTCCACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLRRKDG*GSSTCS
Trigger: GCTGCAGGTGGAGGATCCTCATCCATCCTTCCGCCT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTAAAGGAGGCTCGGTCTaGGCTGCCTGCCCGGTTGGG +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLKGGSV*AACPVG
Trigger: CCCAACCGGGCAGGCAGCTCAGACCGAGCCTCCTTT...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAGCTCCTGGAGTCCCTaGCCCTCTCTCTCAAGCGGA +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSESSWSP*PSLSSG
Trigger: TCCGCTTGAGAGAGAGGGTCAGGGACTCCAGGAGCT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCCCCAGCTCCCCTGACCTaGGCCGATGATGGCCCTTAT +
Preference number: 4 (lower is better)
Translates to: LKILSGGSQCTRRRPRTSPAPLT*ADDGPY
Trigger: ATAAGGGCCATCATCGGCTCAGGTCAGGGGAGCTGG...GGATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCCTCAAACTAGAGCCTaGGGCGCATGCACCGTGGGG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSPQTRA*GACTVG
Trigger: CCCCACGGTGCATGCGCCTCAGGCTCTAGTTTGAGG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACACTCCTGTGTCCACACTaGATCCGCCAGTCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATLLCPH*IRQSCQ
Trigger: CTGACAGGACTGGCGGATGCAGTGTGGACACAGGAG...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCAAGGAAGGGGACCCTaGTTGCCATCTTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLQGRGP*LPSSQR
Trigger: CCGCTGGGAAGATGGCAAGCAGGGTCCCCTTCCTTG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGGCATCCACGAGCTaGAAGCTGACCCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLRASTS*KLTPSS
Trigger: GGAACTGGGGGTCAGCTTGCAGCTCGTGGATGCCCT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACAGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTAGGGCATCCACGAGCTaGAAGCTGACCCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: TGSSMLGNRSCTMALNRGRASTS*KLTPSS
Trigger: GGAACTGGGGGTCAGCTTGCAGCTCGTGGATGCCCT...ACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp CCTGCCCAACCTTGGTCCCACTCTGCAGCCTGGGTCACACAGCCCTCCATTCTCATGGTCCTCTTGAACTaGTCTATTTTTGAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: PAQPWSHSAAWVTQPSILMVLLN*SIFERV
Trigger: CACTCGCTCAAAAATAGAGCAGTTCAAGAGGACCAT...GAGAATGGAGGGCTGTGTGACCCAGGCTGCAGAGTGGGACCAAGGTTGGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGGGGAGCCCCCTCGGTaGAGGTGCAATGCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWGEPPR*RCNAVV
Trigger: GACCACGGCATTGCACCTGCACCGAGGGGGCTCCCC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGTAGGCGGCGCTTCTTaGCAGCATAGCGCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLVGGAS*QHSAEG
Trigger: CCCTTCTGCGCTATGCTGGCAAGAAGCGCCGCCTAC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTAGGCAGTCTTGCCGCTaGCCGTGCAGCCCACGATCA +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSRQSCR*PCSPRS
Trigger: TGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCT...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGGGGGAGGCCTGTAGAATaGGCCATGAGGCAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: VAGVLGFIQLENLGEGERGRPVE*AMRQSC
Trigger: GCAAGACTGCCTCATGGCGCATTCTACAGGCCTCCC...CCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGATGACTCAGGCACCTaGTCCACCCGGGCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSDDSGT*STRAWS
Trigger: AGACCAGGCCCGGGTGGAGCAGGTGCCTGAGTCATC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGCTGTTACGGCCTTCTaGTGCTCATCTGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEAVTAF*CSSASR
Trigger: GCGGGAGGCAGATGAGCAGCAGAAGGCCGTAACAGC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCCTTCCGCACCACAATaGCCAGCAGCTGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSPSAPQ*PAAGPP
Trigger: TGGAGGCCCAGCTGCTGGGCATTGTGGTGCGGAAGG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCCTTCCGCACCACAATaGCCAGCAGCTGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSPSAPQ*PAAGPP
Trigger: TGGAGGCCCAGCTGCTGGGCATTGTGGTGCGGAAGG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCCTTGGCGCTCTTCTTaGGGCTCTCTGCAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSPWRSS*GSLQAG
Trigger: TCCGGCCTGCAGAGAGCCGCAAGAAGAGCGCCAAGG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ATCCACAGTGTGTCCACGGGGCCATCGAACAGGATCCACTTCTCGTCGGGTTTCTACTACTCAAGTCTCTaGCCACTGACTCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: IHSVSTGPSNRIHFSSGFYYSSL*PLTPLS
Trigger: GGACAGTGGAGTCAGTGGGCAGAGACTTGAGTAGTA...GAAACCCGACGAGAAGTGGATCCTGTTCGATGGCCCCGTGGACACACTGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp AACTCCCGCTGGATCTCATCCCGGACCTGGTCCCAGTGCCTCTCTCTAAGGGCAGAAAAATCACTCTCTTaGTCGCATTGTTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: NSRWISSRTWSQCLSLRAEKSLS*SHCWSG
Trigger: CCCACTCCAACAATGCGAGCAAGAGAGTGATTTTTC...TGCCCTTAGAGAGAGGCACTGGGACCAGGTCCGGGATGAGATCCAGCGGGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCCTGACCAGCTTGCCTaGGAGCTTCCTCGGCCACTC +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSPDQLA*ELPRPL
Trigger: GAGTGGCCGAGGAAGCTCCCAGGCAAGCTGGTCAGG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCTCAGCCTGCAGCTCTaGCTCACTGACAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGLSLQL*LTDSRG
Trigger: GCCCCGGCTGTCAGTGAGCCAGAGCTGCAGGCTGAG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCTCAGCCTGCAGCTCTaGCTCACTGACAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLLSLQL*LTDSRG
Trigger: GCCCCGGCTGTCAGTGAGCCAGAGCTGCAGGCTGAG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCGGGAGGCAAGCCTGTaGAAGGTGTCCAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLREASL*KVSSRS
Trigger: GCTTCTGCTGGACACCTTCCACAGGCTTGCCTCCCG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACAATGCCCGCCTTCTCCTaGCTGATTCGCAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATMPAFS*LIRSNG
Trigger: CCCATTGCTGCGAATCAGCCAGGAGAAGGCGGGCAT...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTACAGCCCGTGGGCCGTaGTCTCCATGGTTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSTARGP*SPWFPS
Trigger: AGACGGAAACCATGGAGACCACGGCCCACGGGCTGT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCAGTTGCCAAAGCCCTCTCCAAAGAGAATGATTTCTGCAATGAGGGTGGAGTCACAGCCCGTGGGCCGTaGTCTCCATGGTTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: AVAKALSKENDFCNEGGVTARGP*SPWFPS
Trigger: AGACGGAAACCATGGAGACCACGGCCCACGGGCTGT...GACTCCACCCTCATTGCAGAAATCATTCTCTTTGGAGAGGGCTTTGGCAACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp GTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGGAGGATGCACAGGATCTaGTGGGCCACCACTGACAGC +
Preference number: 4 (lower is better)
Translates to: VAGVLGFIQLENLGEGERRMHRI*WATTDS
Trigger: GCTGTCAGTGGTGGCCCACCAGATCCTGTGCATCCT...CCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCCCCATTCTCTGGCGTaGCCAGGGCAGAGTACAGCT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLPHSLA*PGQSTA
Trigger: AGCTGTACTCTGCCCTGGCCACGCCAGAGAATGGGG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCCCCATTCTCTGGCGTaGCCAGGGCAGAGTACAGCT +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSPHSLA*PGQSTA
Trigger: AGCTGTACTCTGCCCTGGCCACGCCAGAGAATGGGG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGCATCTTGGTGGGCGTaGGCAGGAAGCGCTGTACCA +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLASWWA*AGSAVP
Trigger: TGGTACAGCGCTTCCTGCCCACGCCCACCAAGATGC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTACATGCAGAGGGACTTaGCAGCCAGGGAGACGCGGC +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSTCRGT*QPGRRG
Trigger: GCCGCGTCTCCCTGGCTGCCAAGTCCCTCTGCATGT...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGCCCATACAGCTCCATaGCCCGCACCCACATGCAGA +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEAHTAP*PAPTCR
Trigger: TCTGCATGTGGGTGCGGGCCATGGAGCTGTATGGGC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTCCCGCAGCTTCTCCTaGGCCTCAGCGAGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRSRSFS*ASASAA
Trigger: AGCCGCGCTCGCTGAGGCCCAGGAGAAGCTGCGGGA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTAGGGCGTGGAAGCGCTaGGCCATGCCCATGTGCTCT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSRAWKR*AMPMCS
Trigger: AGAGCACATGGGCATGGCCCAGCGCTTCCACGCCCT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGAGGCCGGGCCCGGCTaGCCCACAGCTCAAACTGCT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWEAGPG*PTAQTA
Trigger: AGCAGTTTGAGCTGTGGGCCAGCCGGGCCCGGCCTC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ATCCACAGTGTGTCCACGGGGCCATCGAACAGGATCCACTTCTCGTCGGGTTTCCTAGGGACAATGCCTTaGGGTTCAAAGGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: IHSVSTGPSNRIHFSSGFLGTMP*GSKGTP
Trigger: AGGAGTTCCCTTTGAACCCCAAGGCATTGTCCCTAG...GAAACCCGACGAGAAGTGGATCCTGTTCGATGGCCCCGTGGACACACTGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp GTACGTGCATTTGTCCCTTCTCTCATCGCTCCAGGCCACCATGGTCCCAGGTACTCTTGCTCGCATTGTTaGAGTGGGTGGAAAAGGGTG +
Preference number: 4 (lower is better)
Translates to: VRAFVPSLIAPGHHGPRYSCSHC*SGWKRV
Trigger: CACCCTTTTCCACCCACTCCAACAATGCGAGCAAGA...GTACCTGGGACCATGGTGGCCTGGAGCGATGAGAGAAGGGACAAATGCACGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGAAAGTAGCCACATCTaGCGAGCCGAAGGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLESSHI*RAEGCG
Trigger: CCCGCACCCTTCGGCTCGCCAGATGTGGCTACTTTC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572933.5
3UTR CAA 72 bp TGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTaGGTGAGGGTGAACGGCGTGCTTTGCAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: WREFLVSYNWKT*VRVNGVLCRPM
Trigger: CATGGGCCTGCAAAGCACGCCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 72 bp GTGCAGCCCACGATCATGGTGGAGTGGCGGGAGTTCTaGGTTTCATACAACTGGAAAACCTTGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VQPTIMVEWREF*VSYNWKTLVRV
Trigger: CACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTCCACCATGATCGTGGGCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACCGAGTGGCCCGCCCTaGCCAGCTTGCCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATPSGPP*PACLGA
Trigger: AGCTCCCAGGCAAGCTGGTCAGGGCGGGCCACTCGG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTCCGAGTGGCCCGCCCTaGCCAGCTTGCCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFPSGPP*PACLGA
Trigger: AGCTCCCAGGCAAGCTGGTCAGGGCGGGCCACTCGG...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGCCAACAGGTGTTCTTaGCATCCAGGATACCCCCGC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSANRCS*HPGYPR
Trigger: GCGGGGGTATCCTGGATGTCAAGAACACCTGTTGGC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCCGCCTTCTCCTGGCTaGTTCGCAGCAATGGGGTAT +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEPPSPG*FAAMGY
Trigger: ATACCCCATTGCTGCGAATCAGCCAGGAGAAGGCGG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCATACCTCTGGGTGCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGCAAACTGGATGTTGGTaGCTGTCTCCTCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: FIPLGAQTRVLPHASVRTQTGCW*LSPPSA
Trigger: TGCAGAAGGAGGAGACAGTCACCAACATCCAGTTTG...CGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGCACCCAGAGGTATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGCACCAGGGAGAACTTaGGGTGCGAACAGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSAPGRT*GANSPA
Trigger: TGCTGGACTGTTCGCACCTCAAGTTCTCCCTGGTGC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GAGTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACTCTGCGGAGGGCGGCTaGTTTTCTCTGCGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: EWREFLVSYNWKTLVRVNSAEGG*FSLRSP
Trigger: AGGAGAACGCAGAGAAAATCAGCCGCCCTCCGCAGA...GTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGTGGCTGCTCGATCTTaGAGATGCCCAGGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLVAARS*RCPGWL
Trigger: GAGCCAACCTGGGCATCTTCAAGATCGAGCAGCCAC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGTGGCTGCTCGATCTTaGAGATGCCCAGGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEVAARS*RCPGWL
Trigger: GAGCCAACCTGGGCATCTTCAAGATCGAGCAGCCAC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATAAGGGTTCCGCAGGTCTaGGATGAGAGGCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: SHCWSGWKRVCLPVREFIRVPQV*DERHGP
Trigger: AGGACCATGCCTCTCATCTCAGACCTGCGGAACCCT...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp GGCCAGGTGGCAGTTCCGGAGAAGGTCCCGCAGGGTCACCCTCATGGTCTGTTCGGATTCTCAGCAACTTaGTGTTGTCAAAGCATTTTT +
Preference number: 4 (lower is better)
Translates to: GQVAVPEKVPQGHPHGLFGFSAT*CCQSIF
Trigger: AAAAATGCTTTGACAACATCAAGTTGCTGAGAATCC...GAACAGACCATGAGGGTGACCCTGCGGGACCTTCTCCGGAACTGCCACCTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCCGTCCACTGGATCTaGCTGGCAGTGATCACCACC +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSAVHWI*LAVITT
Trigger: GGTGGTGATCACTGCCAGTCAGATCCAGTGGACGGC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTGCTCGGGCATCGCGATGCGCTCGCCGTTGATGAGGGTCAACACCTTGTTATCTCCATTCATTGGTGCTaGGGTCATATTCCCCATACA +
Preference number: 4 (lower is better)
Translates to: LLGHRDALAVDEGQHLVISIHWC*GHIPHT
Trigger: TGTATGGGGAATATGACCTCAGCACCAATGAATGGA...GATAACAAGGTGTTGACCCTCATCAACGGCGAGCGCATCGCGATGCCCGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCTTGCAGAGGGAGGTaGTACCGCTGTACTCGGGCA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSACRGR*YRCTRA
Trigger: TGCCCGAGTACAGCGGTATCACCTCCCTCTGCAAGC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGTAGCCTTGGGGAGATaGCAGTCCGTCCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQVALGR*QSVHPQ
Trigger: CTGGGGGTGGACGGACTGTCATCTCCCCAAGGCTAC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGTAGCCTTGGGGAGATaGCAGTCCGTCCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGVALGR*QSVHPQ
Trigger: CTGGGGGTGGACGGACTGTCATCTCCCCAAGGCTAC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTAGTCGCAGATGGATaGAGCCAGGCGGGCCAGACT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSVVADG*SQAGQT
Trigger: AGTCTGGCCCGCCTGGCTTCATCCATCTGCGACTAC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGAAGAGGCTGTCCGATaGCTCAGGCACCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSEEAVR*LRHLLH
Trigger: GTGGAGCAGGTGCCTGAGTCATCGGACAGCCTCTTC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGATCCCCCATGGGGCTaGGGCAGAGCACGATGTGCA +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQDPPWG*GRARCA
Trigger: TGCACATCGTGCTCTGCCTCAGCCCCATGGGGGATC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGATCCCCCATGGGGCTaGGGCAGAGCACGATGTGCA +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGDPPWG*GRARCA
Trigger: TGCACATCGTGCTCTGCCTCAGCCCCATGGGGGATC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGGTGGGGGATGGAGCTaGGCCAGAGGCGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRGGGWS*ARGGRM
Trigger: CATCCTTCCGCCTCTGGCTCAGCTCCATCCCCCACC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGGATCGTGGGCATaGGGCAGACAAGCTGCATGG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLSGSWA*GRQAAW
Trigger: CCATGCAGCTTGTCTGCCTCATGCCCACGATCCACT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGCAGGTCAATGCCGATaGCAAAGGAGGCTCGGTCTG +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEAGQCR*QRRLGL
Trigger: CAGACCGAGCCTCCTTTGTCATCGGCATTGACCTGC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGCCAAGGTCAAAGTCTaGGTGAGGTCCGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSAKVKV*VRSGLS
Trigger: ACTGAGGCCGGACCTCACTCAGACTTTGACCTTGGC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCCGAACCTGCCCTGCTCTaGGATTTCTGGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LKILSGGSQCTRRRPRTSEPALL*DFWLSS
Trigger: GGAGGAGAGCCAGAAATCTCAGAGCAGGGCAGGTTC...GGATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp AAAGGGTGTGCTTGCCAGTCCGTGAATTCATACCTCTGGGTGCACAAACGAGGGAGCTGCAGGTTTCCCTaGATCCAGGCATCCACCTTT +
Preference number: 4 (lower is better)
Translates to: KGCACQSVNSYLWVHKRGSCRFP*IQASTF
Trigger: AAAGGTGGATGCCTGGATTCAGGGAAACCTGCAGCT...CCCTCGTTTGTGCACCCAGAGGTATGAATTCACGGACTGGCAAGCACACCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTTGGGGAGCTCAGCCTaGAGCTCTGGCTCACTGACA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSLGSSA*SSGSLT
Trigger: TGTCAGTGAGCCAGAGCTGCAGGCTGAGCTCCCCAA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGGGTCTGTACAGGCATaGCCAGCTCTAGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSGSVQA*PALASA
Trigger: GGCTGAAGCTAGAGCTGGGCATGCCTGTACAGACCC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGGAAGGGGACCCTGCTTaGCATCTTCCCAGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: LVAEQRHHWFSQIVEWFLEGDPA*HLPSGR
Trigger: TCGCCCGCTGGGAAGATGGCAAGCAGGGTCCCCTTC...CAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCACTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGACGTTGGCCAAGTCGTaGTTCAGGGCATCCACGAGC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLTLAKS*FRASTS
Trigger: GCTCGTGGATGCCCTGAAGCACGACTTGGCCAACGT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GGCCAGGTGGCAGTTCCGGAGAAGGTCCCGCAGGGTCACCCTCATGGTCTGTTCTTCCAGAAGTGTATGTaGTTTCTTCTTGAAGTCATC +
Preference number: 4 (lower is better)
Translates to: GQVAVPEKVPQGHPHGLFFQKCM*FLLEVI
Trigger: GATGACTTCAAGAAGAAAGCACATACACTTCTGGAA...GAACAGACCATGAGGGTGACCCTGCGGGACCTTCTCCGGAACTGCCACCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp AGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTGCTCCATGGTTTCCGTCTaGAGGATCAGGAACCGGCCA +
Preference number: 4 (lower is better)
Translates to: RQLNVGKQILHDGIEQGCSMVSV*RIRNRP
Trigger: TGGCCGGTTCCTGATCCTGCAGACGGAAACCATGGA...GCACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp AACTCCCGCTGGATCTCATCCCGGACCTGGTCCCAGTGCCTCTCTCTAAGGGCACTGGTTATCTTCCAGTaGCTGGAATACTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: NSRWISSRTWSQCLSLRALVIFQ*LEYFFC
Trigger: ACAGAAGAAGTATTCCAGGCACTGGAAGATAACCAG...TGCCCTTAGAGAGAGGCACTGGGACCAGGTCCGGGATGAGATCCAGCGGGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp CTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCCCCACAGCTTCCCATTTaGTGCTGGGCCCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: LKILSGGSQCTRRRPRTSPQLPI*CWALQP
Trigger: AGGTTGGAGGGCCCAGCAGCAAATGGGAAGCTGTGG...GGATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCCAGGGCAGACAGGATaGACAGGATCTGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSPGQTG*TGSGGP
Trigger: TGGCCCACCAGATCCTGTGCATCCTGTCTGCCCTGG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCACCAGAGCCACAATGTAGGCGGCGCTTCTTaGCAGCATAGCGCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: KLLQHIPGMNFYRHQSHNVGGAS*QHSAEG
Trigger: CCCTTCTGCGCTATGCTGGCAAGAAGCGCCGCCTAC...ATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTAACAGGAGAGACACCTaGTCGGGCATCGCGATGCGC +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSNRRDT*SGIAMR
Trigger: GCGCATCGCGATGCCCGAGCAGGTGTCTCTCCTGTT...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTGGGCCAGCAGCTCCTaGCGTTTTTCTCCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSWASSS*RFSPSN
Trigger: GTTGCTGGGAGAAAAACGGCAGGAGCTGCTGGCCCA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTAGGGTCGATCATCAGTaGCCACCTGTTGCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSRVDHQ*PPVASG
Trigger: ACCCGAGGCAACAGGTGGGCACTGATGATCGACCCT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGGTCGATCATCAGTaGCCACCTGTTGCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLRVDHQ*PPVASG
Trigger: ACCCGAGGCAACAGGTGGGCACTGATGATCGACCCT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATGGGCCATGCCCATGTaGTCTGCCAGCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQWAMPM*SASCSR
Trigger: CCTGCTGCAGCTGGCAGAGCACATGGGCATGGCCCA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGAAGCGCTGGGCCATaGCCATGTGCTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQGSAGP*PCALPA
Trigger: AGCTGGCAGAGCACATGGGCATGGCCCAGCGCTTCC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTCCTCCACCTGCAGCTaGTCCACCAGCTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSSSTCS*STSLSR
Trigger: TCTGGACAAGCTGGTGGAGCAGCTGCAGGTGGAGGA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGATGAGGCAGACAAGCTaGATGGGCTCTGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEMRQTS*MGSAST
Trigger: GGTGGAGGCAGAGCCCATGCAGCTTGTCTGCCTCAT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCCTTGGCGCTCTTCTTaGGGCTCTCTGCAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLPWRSS*GSLQAG
Trigger: TCCGGCCTGCAGAGAGCCGCAAGAAGAGCGCCAAGG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGGGCAGGAGTACATaGCCTTGGCGCTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLRGRST*PWRSSC
Trigger: GCAAGAAGAGCGCCAAGGGCATGTACTCCTGCCCCT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTAGGCTCGGTCTGAGCTaGCTGCCCGGTTGGGATAGT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSRLGLS*LPGWDS
Trigger: ACTATCCCAACCGGGCAGGCAGCTCAGACCGAGCCT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GTACGTGCATTTGTCCCTTCTCTCATCGCTCCAGGCCACCATGGTCCCAGGTACCCCCTCTTAGGTACGTaGATTTGTCCCTTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: VRAFVPSLIAPGHHGPRYPLLGT*ICPFSH
Trigger: ATGAGAGAAGGGACAAATGCACGTACCTAAGAGGGG...GTACCTGGGACCATGGTGGCCTGGAGCGATGAGAGAAGGGACAAATGCACGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp ATCCACAGTGTGTCCACGGGGCCATCGAACAGGATCCACTTCTCGTCGGGTTTCCCCAAGCCTACACAGTaGTTACAACAGAGGGTGTTT +
Preference number: 4 (lower is better)
Translates to: IHSVSTGPSNRIHFSSGFPKPTQ*LQQRVF
Trigger: AAACACCCTCTGTTGTAAGCACTGTGTAGGCTTGGG...GAAACCCGACGAGAAGTGGATCCTGTTCGATGGCCCCGTGGACACACTGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCCCCGACACACACCTTaGCACGCTGACCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWPRHTP*HADPPL
Trigger: GAGGGGAGGGTCAGCGTGGCAAGGTGTGTGTCGGGG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTACCCCGACACTACTaGCCCTTCTCCCCAGCACTC +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSLPRHY*PFSPAL
Trigger: GAGTGCTGGGGAGAAGGGGCAGTAGTGTCGGGGTAG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCCCAGCTGTCACAACTaGCCCTTCTCCTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGPSCHN*PFSSPS
Trigger: GGAGGGGGAGGAGAAGGGGCAGTTGTGACAGCTGGG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTCCCCTGCTCCTGTGTaGCCACAGCAGCCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRSPAPV*PQQPEW
Trigger: CCACTCGGGCTGCTGTGGCCACACAGGAGCAGGGGA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCGGGAGGCAAGCCTGTaGAAGGTGTCCAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSREASL*KVSSRS
Trigger: GCTTCTGCTGGACACCTTCCACAGGCTTGCCTCCCG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGATGCCCGCCTTCTCCTaGCTGATTCGCAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLMPAFS*LIRSNG
Trigger: CCCATTGCTGCGAATCAGCCAGGAGAAGGCGGGCAT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCAGTTGCCAAAGCCCTCTCCAAAGAGAATGATTTCTGCAATGAGGGTGGAGTCGGGCCGTGGTCTCCATaGTTTCCGTCTGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: AVAKALSKENDFCNEGGVGPWSP*FPSAGS
Trigger: TGATCCTGCAGACGGAAACCATGGAGACCACGGCCC...GACTCCACCCTCATTGCAGAAATCATTCTCTTTGGAGAGGGCTTTGGCAACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCGACGAAACAGCCCGTaGGCCGTGGTCTCCATGGTT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSRRNSP*AVVSMV
Trigger: AACCATGGAGACCACGGCCCACGGGCTGTTTCGTCG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCCTCTGGGTTTCGGGACTaGCCCAGAATCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LKILSGGSQCTRRRPRTSSGFRD*PRISSR
Trigger: CCTGCTGGAGATTCTGGGCCAGTCCCGAAACCCAGA...GGATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTAGGATGCACAGGATCTaGTGGGCCACCACTGACAGC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSRMHRI*WATTDS
Trigger: GCTGTCAGTGGTGGCCCACCAGATCCTGTGCATCCT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AGGGTCACCCTCATGGTCTGTTCCACATCGCCAAGCCAGGACTCCACAGGGCCTAGTGGCGGGAGTTCTTaGTTTCATACAACTGGAAAA +
Preference number: 4 (lower is better)
Translates to: RVTLMVCSTSPSQDSTGPSGGSS*FHTTGK
Trigger: TTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACT...AGGCCCTGTGGAGTCCTGGCTTGGCGATGTGGAACAGACCATGAGGGTGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp CTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCCAGCCCACGATCATGGTaGAGTGGCGGGAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LKILSGGSQCTRRRPRTSSPRSW*SGGSSW
Trigger: CCAAGAACTCCCGCCACTCCACCATGATCGTGGGCT...GGATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGTTCACCCCATTCTCTaGCGTGGCCAGGGCAGAGTA +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLVHPIL*RGQGRV
Trigger: TACTCTGCCCTGGCCACGCCAGAGAATGGGGTGAAC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGTTCACCCCATTCTCTaGCGTGGCCAGGGCAGAGTA +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEVHPIL*RGQGRV
Trigger: TACTCTGCCCTGGCCACGCCAGAGAATGGGGTGAAC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGTTCTCGCCGTCAGCTaGGTTCACCCCATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEVLAVS*VHPILW
Trigger: CCAGAGAATGGGGTGAACCCAGCTGACGGCGAGAAC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGACTGCAGAACGCTCTaGGCGATGGAGGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSDCRTL*AMEVFP
Trigger: TGGGAAGACCTCCATCGCCCAGAGCGTTCTGCAGTC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCATCTTGGTGGGCGTaGGCAGGAAGCGCTGTACCA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSASWWA*AGSAVP
Trigger: TGGTACAGCGCTTCCTGCCCACGCCCACCAAGATGC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGGTAATGCATCTTGGTaGGCGTGGGCAGGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEGNASW*AWAGSA
Trigger: AGCGCTTCCTGCCCACGCCCACCAAGATGCATTACC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTGGCCTCTGCCCATGTaGGCTCGTTGCCTCGAAGAA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSWPLPM*ARCLEE
Trigger: TTCTTCGAGGCAACGAGCCCACATGGGCAGAGGCCA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCCCCTAGCTGCCTCTTaGCCTCTGCCCATGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGPLAAS*PLPMWA
Trigger: AGCCCACATGGGCAGAGGCCAAGAGGCAGCTAGGGG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCCGATGATATCAGGCTaGAAGTCAGGCTGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEPMISG*KSGWAQ
Trigger: CTGCGCCCAGCCTGACTTCCAGCCTGATATCATCGG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCCAGAGGCGGAAGGATaGATGAGGATCCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLPEAEG*MRILHL
Trigger: CAGGTGGAGGATCCTCATCCATCCTTCCGCCTCTGG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAACTGCTCCACACGCATaGCCAAGTCCCGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQTAPHA*PSPGSR
Trigger: CCTGGACCCGGGACTTGGCCATGCGTGTGGAGCAGT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
3UTR CAA 72 bp CAGCGTTCCCAGTGGTCCACATCCTTCTCAAAGGCCTaGACAAAGCGTGATGCCTTCATGGTAGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: QRSQWSTSFSKA*TKRDAFMVDRA
Trigger: AGCTCTGTCTACCATGAAGGCATCACGCTTTGTCAAGGCCTTTGAGAAGGATGTGGACCACTGGGAACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 72 bp CCTCTTTATTTCCAGACCCCTCTTAGGTACGTGCATTaGTCCCTTCTCTCATCGCTCCAGGCCACCATGGTC +
Preference number: 4 (lower is better)
Translates to: PLYFQTPLRYVH*SLLSSLQATMV
Trigger: GACCATGGTGGCCTGGAGCGATGAGAGAAGGGACAAATGCACGTACCTAAGAGGGGTCTGGAAATAAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 72 bp TGCTCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTaGCCAGTCCGTGAATTCATACCTCTGGGTGCACAA +
Preference number: 4 (lower is better)
Translates to: CSHCWSGWKRVC*PVREFIPLGAQ
Trigger: TTGTGCACCCAGAGGTATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCACCAGCTGCTTACTaGTGCCAGACAGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSESPAAY*CQTGPC
Trigger: GCATGGACCTGTCTGGCATCAGTAAGCAGCTGGTGA...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACAAGGTTTGACTGTGCTTaGCGAGAGCCATCCTGGATC +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATRFDCA*REPSWI
Trigger: GATCCAGGATGGCTCTCGTCAAGCACAGTCAAACCT...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTATACGGGGCAGGAAATaGGCACCAGCAAGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSIRGRK*APARQV
Trigger: GACCTGCCTTGCTGGTGCTCATTTCCTGCCCCGTAT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTACCAGCAGCTTCTCTaGCATCTCTTGGGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEYQQLL*HLLGSP
Trigger: TGGCGAGCCCAAGAGATGTCAGAGAAGCTGCTGGTA...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGTAACTTGCGCTTGGTaGGAATGTCAGGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEVTCAW*ECQGGG
Trigger: GCCACCTCCCTGACATTCTCACCAAGCGCAAGTTAC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGACATGTCCCAGGTCTTaGGGTAGTTCTGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLTCPRS*GSSAAG
Trigger: GCCTGCTGCAGAACTACCTCAAGACCTGGGACATGT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAAGAGACAGGAGGGTTaGGGCGCTGGTAGCGATGAA +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEKRQEG*GAGSDE
Trigger: TTCATCGCTACCAGCGCCTCAACCCTCCTGTCTCTT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCAGCAGCCATCTCCCTaGGCAGAGTCGCGAACTTGT +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSQQPSP*AESRTC
Trigger: ACAAGTTCGCGACTCTGCTCAGGGAGATGGCTGCTG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCACCAGAGCCACAATCAGCAGCCATCTCCCTaGGCAGAGTCGCGAACTTGT +
Preference number: 4 (lower is better)
Translates to: KLLQHIPGMNFYRHQSHNQQPSP*AESRTC
Trigger: ACAAGTTCGCGACTCTGCTCAGGGAGATGGCTGCTG...ATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTGTATGGGAGGGATCTaGGTCTCCACGTTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLCMGGI*VSTLAK
Trigger: CTTGGCCAACGTGGAGACTCAGATCCCTCCCATACA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCAACCCACTCCCCGTTaGGACTGTCCAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSQPTPR*DCPASP
Trigger: TGGAGATGCTGGACAGTCTCAACGGGGAGTGGGTTG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTAGGGTTCCGCAGGTCTaGGATGAGAGGCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSRVPQV*DERHGP
Trigger: AGGACCATGCCTCTCATCTCAGACCTGCGGAACCCT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGGATCTGACTGGCAGTaGTCACCACCTGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRGSDWQ*SPPGQP
Trigger: GGGCTGGCCAGGTGGTGATCACTGCCAGTCAGATCC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTCAGCAGGCACTTGGTaGCATCAGCCGTCCACTGGA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSSAGTW*HQPSTG
Trigger: TCCAGTGGACGGCTGATGTCACCAAGTGCCTGCTGA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCCCGGGCCTGGTCTATaGTATGCGACTGGATCTCTT +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSPGPGL*YATGSL
Trigger: AAGAGATCCAGTCGCATATCATAGACCAGGCCCGGG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCTGCACGCGTTCAATaGGGTAGGCGAAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSESARVQ*GRRRGC
Trigger: ACAGCCTCTTCGCCTACCTCATTGAACGCGTGCAGA...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTGGGAGACGCGGCCGATaGTATCAGGCTGGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLGRRGR*YQAGSQ
Trigger: CTGACTTCCAGCCTGATATCATCGGCCGCGTCTCCC...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGATGGTGGTCTTGGCTaGGGTCTCTGGGCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSDGGLG*GLWAVV
Trigger: CACTACAGCCCAGAGACCTCAGCCAAGACCACCATC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGCGCCAAGTCAGTGTTaGTCTCTGTGGTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSAPSQC*SLWSHW
Trigger: CCAGTGAGACCACAGAGATCAACACTGACTTGGCGC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACACGAAGAACAGGATTaGTGCCCGCTGGGCGCATGG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQHEEQD*CPLGAW
Trigger: CCATGCGCCCAGCGGGCATCAATCCTGTTCTTCGTG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGCACAGGCGGCTCGATaGAGCGGGAGCCAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITAQAAR*SGSQGW
Trigger: CCAACCTTGGCTCCCGCTTCATCGAGCCGCCTGTGC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGCATCCAAGACAGTaGCAGGTGGCAGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLRHPRQ*QVAVCQ
Trigger: CTGGCAAACTGCCACCTGTCACTGTCTTGGATGCCT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGGTGGGGGATGGAGCTaGGCCAGAGGCGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITGGGWS*ARGGRM
Trigger: CATCCTTCCGCCTCTGGCTCAGCTCCATCCCCCACC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGGGTTTGTGCCTCAGTaGTCTGAGAGGCCACATCAG +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEGFVPQ*SERPHQ
Trigger: CTGATGTGGCCTCTCAGATCACTGAGGCACAAACCC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTAGCTGTCCAGGCTCATaGGTAGAGCAGTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSSCPGS*VEQCPS
Trigger: AGAGGGGCACTGCTCTACTCATGAGCCTGGACAGCT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAGGTCAAAGTCTGAGTaGGGTCCGGCCTCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSERSKSE*GPASVL
Trigger: TAGGACTGAGGCCGGACCTCACTCAGACTTTGACCT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ATCCACAGTGTGTCCACGGGGCCATCGAACAGGATCCACTTCTCGTCGGGTTTCCTTCTTCTGTACCTCTaGGACACAAGGGGTCAAAAT +
Preference number: 4 (lower is better)
Translates to: IHSVSTGPSNRIHFSSGFLLLYL*DTRGQN
Trigger: ATTTTGACCCCTTGTGTCTCAGAGGTACAGAAGAAG...GAAACCCGACGAGAAGTGGATCCTGTTCGATGGCCCCGTGGACACACTGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp CCGGGCATGAATTTCTATCGTCACCAGAGCCACAATTTTAAGCCGCATGATCTTTGGCGTGATCTTGGCTaGCTGCAACCTCCGCCTCTC +
Preference number: 4 (lower is better)
Translates to: PGMNFYRHQSHNFKPHDLWRDLG*LQPPPL
Trigger: GAGAGGCGGAGGTTGCAGTCAGCCAAGATCACGCCA...AAGATCATGCGGCTTAAAATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCGCCCCGCAGGACATTaGAAAGGCAGGGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLRPAGH*KGRENP
Trigger: TGGGTTCTCCCTGCCTTTTCAATGTCCTGCGGGGCG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCTGGGTCTATCGCTTTaGAGTCCTGAGGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSLGLSL*SPEGQE
Trigger: TTCCTGCCCCTCAGGACTTCAAAGCGATAGACCCAG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACACCCTTCTTCACCAGCTaGTTACTGATGCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATPFFTS*LLMPDR
Trigger: CCTGTCTGGCATCAGTAAGCAGCTGGTGAAGAAGGG...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGAAGGGGACCCTGCTTaGCATCTTCCCAGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIREGDPA*HLPSGR
Trigger: TCGCCCGCTGGGAAGATGGCAAGCAGGGTCCCCTTC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAAGCAGAAGCACGCCGTaGGGCACGTCCCGCACCAAC +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITSRSTP*GTSRTN
Trigger: GTTGGTGCGGGACGTGCCGCACGGCGTGCTTCTGCT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGACGCCGGAGGATGTaGACCCAGCGCGCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIRRRRM*TQRAFP
Trigger: CGGAAAGGCGCGCTGGGTGCACATCCTCCGGCGTCG...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGATTTTCACGCAGAATaGGCAGGTCCTCGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLDFHAE*AGPRLA
Trigger: AGCGAGCCGAGGACCTGCGCATTCTGCGTGAAAATC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGGGCATCCTCCATCATaGGGTCCAGCCGAATCATGT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLGHPPS*GPAESC
Trigger: ACATGATTCGGCTGGACCGCATGATGGAGGATGCCC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAGTTCCTCCAGTGTCTaGGGAGGGCGGCTGATTTTC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSESSSSV*GGRLIF
Trigger: GAAAATCAGCCGCCCTCCGCAGACACTGGAGGAACT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATAAGTTCCTCCAGTGTCTaGGGAGGGCGGCTGATTTTC +
Preference number: 4 (lower is better)
Translates to: SHCWSGWKRVCLPVREFISSSSV*GGRLIF
Trigger: GAAAATCAGCCGCCCTCCGCAGACACTGGAGGAACT...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTAGGGCATCCACGAGCTaGAAGCTGACCCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLRASTS*KLTPSS
Trigger: GGAACTGGGGGTCAGCTTGCAGCTCGTGGATGCCCT...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTACGTTGGCCAAGTCGTaGTTCAGGGCATCCACGAGC +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSTLAKS*FRASTS
Trigger: GCTCGTGGATGCCCTGAAGCACGACTTGGCCAACGT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GAGGCCACTCTTGTAAAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTGCGATCTCCCAGATTTaGTGGAGGGCATCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: EATLVKLLQHIPGMNFYRAISQI*WRASSS
Trigger: GGAGCTCGATGCCCTCCAGCAAATCTGGGAGATCGC...ACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTTTACAAGAGTGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGGACCTGGTCCCAGTaGCTCTCTCTAAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRRTWSQ*LSLRAG
Trigger: CCCTGCCCTTAGAGAGAGGCACTGGGACCAGGTCCG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCATACCTCTGGGTGCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGCCAAGCTCCACAATCTaGTCCAAGGTGAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: FIPLGAQTRVLPHASVRTPSSTI*SKVKLS
Trigger: TGAAAGCTTCACCTTGGAGCAGATTGTGGAGCTTGG...CGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGCACCCAGAGGTATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCCACAGCTTCCCATTTaGTGCTGGGCCCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSPQLPI*CWALQP
Trigger: AGGTTGGAGGGCCCAGCAGCAAATGGGAAGCTGTGG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCCAGGGCAGACAGGATaGACAGGATCTGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGPGQTG*TGSGGP
Trigger: TGGCCCACCAGATCCTGTGCATCCTGTCTGCCCTGG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGTAGGCGGCGCTTCTTaGCAGCATAGCGCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQVGGAS*QHSAEG
Trigger: CCCTTCTGCGCTATGCTGGCAAGAAGCGCCGCCTAC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGATGTCTCGAATCTCCTaGTCAACGGTCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLMSRIS*STVSRS
Trigger: GCTGCGGGAGACCGTTGAGCAGGAGATTCGAGACAT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGTGAACGGCGTGCTTTaGAGGCCCATGTCTCGAATC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSVNGVL*RPMSRI
Trigger: GATTCGAGACATGGGCCTGCAAAGCACGCCGTTCAC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATAGTGAACGGCGTGCTTTaGAGGCCCATGTCTCGAATC +
Preference number: 4 (lower is better)
Translates to: SHCWSGWKRVCLPVREFIVNGVL*RPMSRI
Trigger: GATTCGAGACATGGGCCTGCAAAGCACGCCGTTCAC...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGAGGCAGTCTTGCCGCTaGCCGTGCAGCCCACGATCA +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWRQSCR*PCSPRS
Trigger: TGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAAACAGGAGAGACACCTaGTCGGGCATCGCGATGCGC +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQNRRDT*SGIAMR
Trigger: GCGCATCGCGATGCCCGAGCAGGTGTCTCTCCTGTT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAAGGCTTCTGTGTCTaGCGCATCAACCAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSEGFCV*RINQPV
Trigger: GACCGGCTGGTTGATGCGGCAGACACAGAAGCCTTC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGACTCTGGCGTCCGCTaGCCCCGATACCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITDSGVR*PRYPPG
Trigger: TCCTGGTGGGTATCGGGGGCAGCGGACGCCAGAGTC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAGGCAGAGCACGATGTaGAGGTTGTTCTGCACGCGT +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSERQSTM*RLFCTR
Trigger: ACGCGTGCAGAACAACCTGCACATCGTGCTCTGCCT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGCCTCCCGCTTCTGCTaGACAATGATGACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSASRFC*TMMTRY
Trigger: GTACCTGGTCATCATTGTGCAGCAGAAGCGGGAGGC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTCTGCCTCCCGCTTCTaGTGCACAATGATGACCAGG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSSASRF*CTMMTR
Trigger: CCTGGTCATCATTGTGCAGCAGAAGCGGGAGGCAGA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTCTGCCTCCCGCTTCTaGTGCACAATGATGACCAGG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLSASRF*CTMMTR
Trigger: CCTGGTCATCATTGTGCAGCAGAAGCGGGAGGCAGA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGTTACGGCCTTCTGCTaGTCATCTGCCTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSVTAFC*SSASRF
Trigger: GAAGCGGGAGGCAGATGAGCAGCAGAAGGCCGTAAC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTTCTGTTCCCCTAGCTaGCTCTTGGCCTCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLFCSPS*LLASAH
Trigger: ATGGGCAGAGGCCAAGAGGCAGCTAGGGGAACAGAA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCCTCCTTATCGCCAATaGGCATCAACAGCCGACCAC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSPPYRQ*ASTADH
Trigger: GTGGTCGGCTGTTGATGCGCATTGGCGATAAGGAGG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTACATCAGCATTGGGGTaGTGGCCAAAGGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSTSALG*WPKASG
Trigger: CCCTGAGGCCTTTGGCCAGCACCCCAATGCTGATGT...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAAGCTGCATGGGCTCTaGCTCCACCAAGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLKLHGL*LHQAGV
Trigger: AACTCCTGCTTGGTGGAGGCAGAGCCCATGCAGCTT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACAAGGTGTGAGCCACCGTaGCTGGCCGATCATTGTTTT +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATRCEPP*LADHCF
Trigger: AAAACAATGATCGGCCAGGCACGGTGGCTCACACCT...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp CCGGGCATGAATTTCTATCGTCACCAGAGCCACAATTTTAAGCCGCATGATCTTGAGGGTCCTGCCTCATaGATCCGTGAGAACGAGCCG +
Preference number: 4 (lower is better)
Translates to: PGMNFYRHQSHNFKPHDLEGPAS*IRENEP
Trigger: CGGCTCGTTCTCACGGATGCATGAGGCAGGACCCTC...AAGATCATGCGGCTTAAAATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGCCACTCTAAGAAGTTaGCCCTCGCAGCCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQATLRS*PSQPSR
Trigger: CCGAGAGGGCTGCGAGGGGCAACTTCTTAGAGTGGC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTCCACAGCAGCCCGAGTaGCCCGCCCTGACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFPQQPE*PALTSL
Trigger: CAAGCTGGTCAGGGCGGGCCACTCGGGCTGCTGTGG...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCCACAGCAGCCCGAGTaGCCCGCCCTGACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIPQQPE*PALTSL
Trigger: CAAGCTGGTCAGGGCGGGCCACTCGGGCTGCTGTGG...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGATCTGCCGGGTCCAGTaGATCATGGAGGTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLICRVQ*IMEVSS
Trigger: GCTAGAGACCTCCATGATCCACTGGACCCGGCAGAT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACAGTTATCTGTGGCCCCTaGGCACCAAAGAAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATVICGP*APKKQG
Trigger: TCCTTGCTTCTTTGGTGCCCAGGGGCCACAGATAAC...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTATGCCCGCCTTCTCCTaGCTGATTCGCAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSMPAFS*LIRSNG
Trigger: CCCATTGCTGCGAATCAGCCAGGAGAAGGCGGGCAT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGGCCGTGGTCTCCATaGTTTCCGTCTGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSGPWSP*FPSAGS
Trigger: TGATCCTGCAGACGGAAACCATGGAGACCACGGCCC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGATCTCATCCCGGACCTaGTCCCAGTGCCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEISSRT*SQCLSL
Trigger: TAGAGAGAGGCACTGGGACCAGGTCCGGGATGAGAT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGATCTCATCCCGGACCTaGTCCCAGTGCCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLISSRT*SQCLSL
Trigger: TAGAGAGAGGCACTGGGACCAGGTCCGGGATGAGAT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTGTGTCCAGGAGGCCTaGGTGATGGGTGCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRCVQEA*VMGAPE
Trigger: CTCCGGAGCACCCATCACCCAGGCCTCCTGGACACA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTGTGTCCAGGAGGCCTaGGTGATGGGTGCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWCVQEA*VMGAPE
Trigger: CTCCGGAGCACCCATCACCCAGGCCTCCTGGACACA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTCTGGGTTTCGGGACTaGCCCAGAATCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSSGFRD*PRISSR
Trigger: CCTGCTGGAGATTCTGGGCCAGTCCCGAAACCCAGA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCCATCAAAATGGAAATaGGTGAGGCCGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLPSKWK*VRPAAR
Trigger: CCTGGCTGCCGGCCTCACCCATTTCCATTTTGATGG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTGCAGCCCACGATCATaGTGGAGTGGCGGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSCSPRS*WSGGSS
Trigger: AGAACTCCCGCCACTCCACCATGATCGTGGGCTGCA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTTCTCGCCGTCAGCTaGGTTCACCCCATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSVLAVS*VHPILW
Trigger: CCAGAGAATGGGGTGAACCCAGCTGACGGCGAGAAC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGCACGTAGACACCCTTaGTTCGCTTCTCAACCCTGC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSARRHP*FASQPC
Trigger: GCAGGGTTGAGAAGCGAACCAAGGGTGTCTACGTGC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGCTTTTGCCCCCGAATaGCACGTAGACACCCTTGGT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLAFAPE*HVDTLG
Trigger: ACCAAGGGTGTCTACGTGCCATTCGGGGGCAAAAGC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAGCTCCAGGGGTGGCTaGGACCCAAACATGTCCTTA +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSESSRGG*DPNMSL
Trigger: TAAGGACATGTTTGGGTCCCAGCCACCCCTGGAGCT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCTCCAGGGGTGGCTaGGACCCAAACATGTCCTTA +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLSSRGG*DPNMSL
Trigger: TAAGGACATGTTTGGGTCCCAGCCACCCCTGGAGCT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAAGGCGGGCCAGACTCTaGCGTCCGCTGCCCCCGATA +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATRRARL*RPLPPI
Trigger: TATCGGGGGCAGCGGACGCCAGAGTCTGGCCCGCCT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGACCAAGGCTGGGTACTaGCGGATCCAGTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLTKAGY*RIQFLK
Trigger: CTTCAGGAACTGGATCCGCCAGTACCCAGCCTTGGT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCCCCTAGCTGCCTCTTaGCCTCTGCCCATGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWPLAAS*PLPMWA
Trigger: AGCCCACATGGGCAGAGGCCAAGAGGCAGCTAGGGG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGCAGCAGGGCACTGGTaGGGTCCACACCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITAAGHW*GPHQGT
Trigger: TGTCCCCTGGTGTGGACCCCACCAGTGCCCTGCTGC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTATAGGGAAGTCTGGGTaGGGGATGGAGCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSIGKSG*GMELSQ
Trigger: CTGGCTCAGCTCCATCCCCCACCCAGACTTCCCTAT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGTCCGGTCCAGGGAGATaGCGTGGCAGCATAAGCGGA +
Preference number: 4 (lower is better)
Translates to: LVAEQRHHWFSQIVEWFLSGPGR*RGSISG
Trigger: TCCGCTTATGCTGCCACGCCATCTCCCTGGACCGGA...CAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCACTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACACCTGAGCAAAGATGCTaGTCTGATCTAGGACCCAGC +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATPEQRC*SDLGPS
Trigger: GCTGGGTCCTAGATCAGACCAGCATCTTTGCTCAGG...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTCTTCACTCTGTGCTTaGGGTCCCTCCAACCGTGGC +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGSSLCA*GPSNRG
Trigger: GCCACGGTTGGAGGGACCTCAAGCACAGAGTGAAGA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATCTTCACTCTGTGCTTaGGGTCCCTCCAACCGTGGC +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQSSLCA*GPSNRG
Trigger: GCCACGGTTGGAGGGACCTCAAGCACAGAGTGAAGA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCGAAGTTCTCCCAGGTaGTGGGAACTGGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLRSSPR*WELVLG
Trigger: GCCAAGCACCAGTTCCCATCACCTGGGAGAACTTCG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAGGTTTGACTGTGCTTaGCGAGAGCCATCCTGGATC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSERFDCA*REPSWI
Trigger: GATCCAGGATGGCTCTCGTCAAGCACAGTCAAACCT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTCACCTCCAGGTCCTTaGTTCCGGCACGGAACTTAT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLSPPGP*FRHGTY
Trigger: ATAAGTTCCGTGCCGGAATCAAGGACCTGGAGGTGA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCACCAACTCGAAGGCTaGGGTGATCAGGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSHQLEG*GDQVLG
Trigger: ACCCAGAACCTGATCACCTCAGCCTTCGAGTTGGTG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGGGCCAGCTCGCTATTaGACAGCATGTAGAGATCCA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSGPARY*TACRDP
Trigger: TGGATCTCTACATGCTGTTCAATAGCGAGCTGGCCC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAATACGGGGCAGGAAATaGGCACCAGCAAGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQIRGRK*APARQV
Trigger: GACCTGCCTTGCTGGTGCTCATTTCCTGCCCCGTAT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTAGTCTGCAGAGTGGGTaGGAATTCCACCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSSLQSG*EFHLCH
Trigger: GTGGCACAGGTGGAATTCTCACCCACTCTGCAGACT...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTAAGAGACAGGAGGGTTaGGGCGCTGGTAGCGATGAA +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSKRQEG*GAGSDE
Trigger: TTCATCGCTACCAGCGCCTCAACCCTCCTGTCTCTT...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGCACCAGGGAGAACTTaGGGTGCGAACAGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGAPGRT*GANSPA
Trigger: TGCTGGACTGTTCGCACCTCAAGTTCTCCCTGGTGC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTCTGCGGAGGGCGGCTaGTTTTCTCTGCGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLSAEGG*FSLRSP
Trigger: AGGAGAACGCAGAGAAAATCAGCCGCCCTCCGCAGA...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR TCA 90 bp TCTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCTGTATGGGAGGGATCTaGGTCTCCACGTTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SKNTEWRKSMYSPSPENICMGGI*VSTLAK
Trigger: CTTGGCCAACGTGGAGACTCAGATCCCTCCCATACA...GATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTCCTTCTCCAGGTTCTaGAGGTCCTTGGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGSFSRF*RSLEGG
Trigger: GCCACCCTCCAAGGACCTTCAGAACCTGGAGAAGGA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATCCTTCTCCAGGTTCTaGAGGTCCTTGGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQSFSRF*RSLEGG
Trigger: GCCACCCTCCAAGGACCTTCAGAACCTGGAGAAGGA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAAGGGTTCCGCAGGTCTaGGATGAGAGGCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQRVPQV*DERHGP
Trigger: AGGACCATGCCTCTCATCTCAGACCTGCGGAACCCT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGGTACTATGTCGAGCTaGGTCACATCCCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEGTMSS*VTSQVL
Trigger: CAAGACCTGGGATGTGACTCAGCTCGACATAGTACC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTGGCCTTGACAAAGCGTaGTGCCTTCATGGTAGACAG +
Preference number: 4 (lower is better)
Translates to: TGSSMLGNRSCTMALNRGGLDKA*CLHGRQ
Trigger: CTGTCTACCATGAAGGCATCACGCTTTGTCAAGGCC...ACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCCAGGAGGCCTGGGTaGTGGGTGCTCCGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATSRRPG*WVLRRA
Trigger: TGCTCTCCGGAGCACCCATCACCCAGGCCTCCTGGA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCAGGGGTGCATCAACTaGAGTGAGCTTGGCGATGTT +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSQGCIN*SELGDV
Trigger: AACATCGCCAAGCTCACTTCAGTTGATGCACCCCTG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCTTGCACGATGGCATTaGACAGGGGTGCATCAACTG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLLARWH*TGVHQL
Trigger: CAGTTGATGCACCCCTGTTCAATGCCATCGTGCAAG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GCAGTTGCCAAAGCCCTCTCCAAAGAGAATGATTTCTGCAATGAGGGTGGAGTCCTTGCACGATGGCATTaGACAGGGGTGCATCAACTG +
Preference number: 4 (lower is better)
Translates to: AVAKALSKENDFCNEGGVLARWH*TGVHQL
Trigger: CAGTTGATGCACCCCTGTTCAATGCCATCGTGCAAG...GACTCCACCCTCATTGCAGAAATCATTCTCTTTGGAGAGGGCTTTGGCAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCACATGCCGTCCGCATaGCACTGGACAAGATGCCAT +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSHMPSA*HWTRCH
Trigger: ATGGCATCTTGTCCAGTGTCATGCGGACGGCATGTG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGCTTGCAGAGGGAGGTaGTACCGCTGTACTCGGGCA +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRACRGR*YRCTRA
Trigger: TGCCCGAGTACAGCGGTATCACCTCCCTCTGCAAGC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTGCCGAATATGCGGATaGTCTGGGACTTTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSCRICG*SGTLWG
Trigger: TCCCCACAAAGTCCCAGATCATCCGCATATTCGGCA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCTCTTGGGGCCACTCTaGGAACCAGTTGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLLLGPL*EPVDGC
Trigger: ACAACCATCAACTGGTTCTCAGAGTGGCCCCAAGAG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCTCTTGGGGCCACTCTaGGAACCAGTTGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSLLGPL*EPVDGC
Trigger: ACAACCATCAACTGGTTCTCAGAGTGGCCCCAAGAG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCCAGGTCTACTCCTATaGGGCACTTCTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSPGLLL*GTSQPP
Trigger: AGGTGGCTGAGAAGTGCCTCATAGGAGTAGACCTGG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTGCTTCTCCCGAAGCTaGGCCAAGGCAGCGTTCATT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSCFSRS*AKAAFI
Trigger: AATGAACGCTGCCTTGGCTCAGCTTCGGGAGAAGCA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGATGTTGATGACCAGTaGGTCCTTCTGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEDVDDQ*VLLLLQ
Trigger: CTGGAGGAGCAGAAGGACTCACTGGTCATCAACATC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCATCCTCCAGCTCCTTaGGCTTCCTTTTACCAGCCG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSHPPAP*ASFYQP
Trigger: CGGCTGGTAAAAGGAAGCTCAAGGAGCTGGAGGATG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCACGAAGAACAGGATTaGTGCCCGCTGGGCGCATGG +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRHEEQD*CPLGAW
Trigger: CCATGCGCCCAGCGGGCATCAATCCTGTTCTTCGTG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGCACAGGCGGCTCGATaGAGCGGGAGCCAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIAQAAR*SGSQGW
Trigger: CCAACCTTGGCTCCCGCTTCATCGAGCCGCCTGTGC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAACACCCAGTGTCCCTaGGTCACACCCTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRNTQCP*VTPSRR
Trigger: CCTCCGAGAGGGTGTGACTCAGGGACACTGGGTGTT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAGGCGGAAGGATGGATaGGGATCCTCCACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRRRKDG*GSSTCS
Trigger: GCTGCAGGTGGAGGATCCTCATCCATCCTTCCGCCT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGCTGACCTGCAAGATTaGGATAGGGAAGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEADLQD*DREVWV
Trigger: CACCCAGACTTCCCTATCTCAATCTTGCAGGTCAGC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTAGTGGATCGTGGGCATaGGGCAGACAAGCTGCATGG +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLSGSWA*GRQAAW
Trigger: CCATGCAGCTTGTCTGCCTCATGCCCACGATCCACT...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTAAAGGAGGCTCGGTCTaGGCTGCCTGCCCGGTTGGG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIKGGSV*AACPVG
Trigger: CCCAACCGGGCAGGCAGCTCAGACCGAGCCTCCTTT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCCCCTCTTGATCCAATaGTCAGGTGTCATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSPLLIQ*SGVMAP
Trigger: TGGGGCCATGACACCTGATCATTGGATCAAGAGGGG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTAGGTCAAAGTCTGAGTaGGGTCCGGCCTCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSRSKSE*GPASVL
Trigger: TAGGACTGAGGCCGGACCTCACTCAGACTTTGACCT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACCCAGGCGCAAAGTCTaGGGCGCTGGGCACTCTCTT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITPRRKV*GAGHSL
Trigger: AAGAGAGTGCCCAGCGCCTCAGACTTTGCGCCTGGG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCCCAAACTGCACAGTTaGCTCGAAGTTCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLPKLHS*LEVLPG
Trigger: ACCTGGGAGAACTTCGAGGCAACTGTGCAGTTTGGG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACAAGCATCTCCTTTATCTaGCGGGTCCAGTGGATCATG +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATSISFI*RVQWIM
Trigger: CATGATCCACTGGACCCGGCAGATAAAGGAGATGCT...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTGCCAGACAGGTCCATaGATCGGTTGCGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSCQTGP*IGCART
Trigger: AGTTCTGGCGCAACCGATGCATGGACCTGTCTGGCA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTCAAGGAAGGGGACCCTaGTTGCCATCTTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLIQGRGP*LPSSQR
Trigger: CCGCTGGGAAGATGGCAAGCAGGGTCCCCTTCCTTG...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAAGCAGAAGCACGCCGTaGGGCACGTCCCGCACCAAC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATSRSTP*GTSRTN
Trigger: GTTGGTGCGGGACGTGCCGCACGGCGTGCTTCTGCT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGGGCATCCTCCATCATaGGGTCCAGCCGAATCATGT +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSGHPPS*GPAESC
Trigger: ACATGATTCGGCTGGACCGCATGATGGAGGATGCCC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGGGTCGCGAACTTGTTCTaGCATTCATTGCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VAGVLGFIQLENLGEGERVANLF*HSLQCC
Trigger: GCAGCACTGCAATGAATGGCAGAACAAGTTCGCGAC...CCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTCCTTGGAGGGTGGCTaGTCGATCTTGAAGATGCCC +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSSLEGG*SILKMP
Trigger: GGGCATCTTCAAGATCGAGCAGCCACCCTCCAAGGA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGAGGATTTTCTTGTCTaGCCGCTCCTTCGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSEDFLV*PLLRCQ
Trigger: CTGACAGCGAAGGAGCGGGCAGACAAGAAAATCCTC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTCGGTGCAGGTGCAATaGCGTGGTCAGTGTCATGTA +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLSVQVQ*RGQCHV
Trigger: TACATGACACTGACCACGGCATTGCACCTGCACCGA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCCTCGGTGCAGGTGCAATaGCGTGGTCAGTGTCATGTA +
Preference number: 4 (lower is better)
Translates to: LKILSGGSQCTRRRPRTSSVQVQ*RGQCHV
Trigger: TACATGACACTGACCACGGCATTGCACCTGCACCGA...GGATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGTGAACGGCGTGCTTTaGAGGCCCATGTCTCGAATC +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSVNGVL*RPMSRI
Trigger: GATTCGAGACATGGGCCTGCAAAGCACGCCGTTCAC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGGCCGGAGAGGCCATTaGCAGGTCCTCCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGGRRGH*QVLHFK
Trigger: TTTGAAGTGGAGGACCTGGCAATGGCCTCTCCGGCC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATGGGCCAGCAGCTCCTaGCGTTTTTCTCCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQWASSS*RFSPSN
Trigger: GTTGCTGGGAGAAAAACGGCAGGAGCTGCTGGCCCA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGCTGTTACGGCCTTCTaGTGCTCATCTGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWAVTAF*CSSASR
Trigger: GCGGGAGGCAGATGAGCAGCAGAAGGCCGTAACAGC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGTGATCTTGGAGGTATaGAGCGTGTTCACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSVILEV*SVFTSC
Trigger: GCAGCTGGTGAACACGCTGCATACCTCCAAGATCAC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAATGTGCTCTGCCAGCTaGAGCAGGGCACTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITMCSAS*SRALVG
Trigger: CCCCACCAGTGCCCTGCTGCAGCTGGCAGAGCACAT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTCCTCCACCTGCAGCTaGTCCACCAGCTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGSSTCS*STSLSR
Trigger: TCTGGACAAGCTGGTGGAGCAGCTGCAGGTGGAGGA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAACATCAGCATTGGGGTaGTGGCCAAAGGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQTSALG*WPKASG
Trigger: CCCTGAGGCCTTTGGCCAGCACCCCAATGCTGATGT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCTTCTTGCGGCTCTCTaGAGGCCGGAAGTGGATCGT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGLLAAL*RPEVDR
Trigger: ACGATCCACTTCCGGCCTGCAGAGAGCCGCAAGAAG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACAGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTCTCTCCCACAGAACCTaGCCTGCTCTGAGATTTCTG +
Preference number: 4 (lower is better)
Translates to: TGSSMLGNRSCTMALNRGLSHRT*PALRFL
Trigger: CAGAAATCTCAGAGCAGGGCAGGTTCTGTGGGAGAG...ACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGGCCCCAGGAGGAACTaGTCTGCTAAGTCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITGPRRN*SAKSGL
Trigger: GAGCCCCGACTTAGCAGAGCAGTTCCTCCTGGGGCC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCCCCTGCTCCTGTGTaGCCACAGCAGCCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATSPAPV*PQQPEW
Trigger: CCACTCGGGCTGCTGTGGCCACACAGGAGCAGGGGA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTTCCCCTGCTCCTGTGTaGCCACAGCAGCCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFSPAPV*PQQPEW
Trigger: CCACTCGGGCTGCTGTGGCCACACAGGAGCAGGGGA...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGCTCAGGCTCCTCCTTaGGGAGCTCAGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITAQAPP*GAQPAA
Trigger: AGCTGCAGGCTGAGCTCCCCAAGGAGGAGCCTGAGC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACACAGGCTTCATGTTCATaGCCTCTGCAGGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATQASCS*PLQGCR
Trigger: TCTACATCCCTGCAGAGGCCATGAACATGAAGCCTG...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGTTATCTGTGGCCCCTaGGCACCAAAGAAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSVICGP*APKKQG
Trigger: TCCTTGCTTCTTTGGTGCCCAGGGGCCACAGATAAC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGTAGGGCTCCAGGTCTaGCCATTTCTTGTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLVGLQV*PFLVPF
Trigger: GAACGGAACAAGAAATGGCCAGACCTGGAGCCCTAC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTTCTCTGACATCTCTTaGGCTCGCCAGCCAATGGTC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSFSDIS*ARQPMV
Trigger: GACCATTGGCTGGCGAGCCCAAGAGATGTCAGAGAA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTTGGAAGAGTGGGTTTaGGCTGGTCTTTCCATCCCC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSLEEWV*AGLSIP
Trigger: GGGGATGGAAAGACCAGCCCAAACCCACTCTTCCAA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTCTGAGTCTCCACGTTaGCCAAGTCGTGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSSESPR*PSRASG
Trigger: CCCTGAAGCACGACTTGGCCAACGTGGAGACTCAGA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGTTCTGAAGGTCCTTaGAGGGTGGCTGCTCGATCT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSGSEGP*RVAARS
Trigger: AGATCGAGCAGCCACCCTCCAAGGACCTTCAGAACC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTGCGTAGACAGAGCTACCTaGTTATCTTCCAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RQLNVGKQILHDGIEQGCVDRAT*LSSSAW
Trigger: CCAGGCACTGGAAGATAACCAGGTAGCTCTGTCTAC...GCACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGCAGTGATCACCACCTaGCCAGCCCACTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRAVITT*PAHSFT
Trigger: GGTGAAGGAGTGGGCTGGCCAGGTGGTGATCACTGC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTACATTCGGCCCATaGACTTGTAGTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLSTFGP*TCSPGP
Trigger: AGGGCCTGGACTACAAGTCCATGGGCCGAATGTACT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCATGCACAGGATCTGGTaGGCCACCACTGACAGCACC +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGMHRIW*ATTDST
Trigger: GGTGCTGTCAGTGGTGGCCCACCAGATCCTGTGCAT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTATGCACAGGATCTGGTaGGCCACCACTGACAGCACC +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLMHRIW*ATTDST
Trigger: GGTGCTGTCAGTGGTGGCCCACCAGATCCTGTGCAT...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCCATCAAAATGGAAATaGGTGAGGCCGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSPSKWK*VRPAAR
Trigger: CCTGGCTGCCGGCCTCACCCATTTCCATTTTGATGG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCACCAGAGCCACAATCCATCAAAATGGAAATaGGTGAGGCCGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: KLLQHIPGMNFYRHQSHNPSKWK*VRPAAR
Trigger: CCTGGCTGCCGGCCTCACCCATTTCCATTTTGATGG...ATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp AAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCACCAGAGCCACAATAGTCAGGCACCACCATaGCAATTGGGCGGAACATGG +
Preference number: 4 (lower is better)
Translates to: KLLQHIPGMNFYRHQSHNSQAPP*QLGGTW
Trigger: CCATGTTCCGCCCAATTGCCATGGTGGTGCCTGACT...ATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCAGCCCACGATCATGGTaGAGTGGCGGGAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGSPRSW*SGGSSW
Trigger: CCAAGAACTCCCGCCACTCCACCATGATCGTGGGCT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAGCAGAATGGGATTCTaGTTGGCCACCAAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSESRMGF*LATKLL
Trigger: GAGCAGCTTGGTGGCCAACCAGAATCCCATTCTGCT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGACCCACCAGCAGAATaGGATTCTGGTTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSDPPAE*DSGWPP
Trigger: TGGTGGCCAACCAGAATCCCATTCTGCTGGTGGGTC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCCTCGATCTGGAAGGTaGTGTAGTCGCAGATGGATG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLPRSGR*CSRRWM
Trigger: CATCCATCTGCGACTACACCACCTTCCAGATCGAGG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTAGCTCCACCCCAGCCTaGCGATACAGACGCTTGATA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSSSTPA*RYRRLI
Trigger: TATCAAGCGTCTGTATCGCCAGGCTGGGGTGGAGCT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATGCTCCACCCGGGCCTaGTCTATGATATGCGACTGG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQCSTRA*SMICDW
Trigger: CCAGTCGCATATCATAGACCAGGCCCGGGTGGAGCA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCAGTTCACCAAGGCTaGGTACTGGCGGATCCAGTT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSAVHQG*VLADPV
Trigger: AACTGGATCCGCCAGTACCCAGCCTTGGTGAACTGC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCGCAGTTTATTGGCTTaGGCCAGCAGCTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGRSLLA*ASSSCR
Trigger: ACGGCAGGAGCTGCTGGCCCAAGCCAATAAACTGCG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTGGCCTCTGCCCATGTaGGCTCGTTGCCTCGAAGAA +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLWPLPM*ARCLEE
Trigger: TTCTTCGAGGCAACGAGCCCACATGGGCAGAGGCCA...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCCGATGATATCAGGCTaGAAGTCAGGCTGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLPMISG*KSGWAQ
Trigger: CTGCGCCCAGCCTGACTTCCAGCCTGATATCATCGG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCCAGCAGGGAGCCGGTaGCCTCATTCAGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIPAGSR*PHSAAA
Trigger: TGCGGCTGCTGAATGAGGCCACCGGCTCCCTGCTGG...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGCATCCAGTGAGAACTaGTACATGGGGTCGATGCAG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSASSEN*YMGSMQ
Trigger: CTGCATCGACCCCATGTACCAGTTCTCACTGGATGC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCATGGATTGTCCATTTaGCCCTCCCGATCCAAGACC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLHGLSI*PSRSKT
Trigger: GGTCTTGGATCGGGAGGGCCAAATGGACAATCCATG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTATTTTCCCACTCACCTaGCAGCATCGCCTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSIFPLT*QHRLLR
Trigger: CCGGAGAAGGCGATGCTGCCAGGTGAGTGGGAAAAT...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAAAGGCCACGCGGTCCTaGCGCAGGGAGCGAACGATC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATKATRS*RRERTI
Trigger: GATCGTTCGCTCCCTGCGCCAGGACCGCGTGGCCTT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACCAGAGGCGGAAGGATaGATGAGGATCCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQPEAEG*MRILHL
Trigger: CAGGTGGAGGATCCTCATCCATCCTTCCGCCTCTGG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCAGGCCACATCAGCATTaGGGTGCTGGCCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGRPHQH*GAGQRP
Trigger: AGGCCTTTGGCCAGCACCCCAATGCTGATGTGGCCT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTCTGCAGGCCGGAAGTaGATCGTGGGCATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRSAGRK*IVGMRQ
Trigger: CTGCCTCATGCCCACGATCCACTTCCGGCCTGCAGA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAAGCTGCCTGCCCGGTTaGGATAGTAATAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQSCLPG*DSNSRG
Trigger: GCCCCTGCTATTACTATCCCAACCGGGCAGGCAGCT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAATGATCAGGTGTCATaGCCCCAGACCGCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSENDQVS*PQTAGQ
Trigger: TTGACCTGCGGTCTGGGGCCATGACACCTGATCATT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTAATGATCAGGTGTCATaGCCCCAGACCGCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSNDQVS*PQTAGQ
Trigger: TTGACCTGCGGTCTGGGGCCATGACACCTGATCATT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGCCCCGACTGGAGAACTaGATGTGCATCTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: LVAEQRHHWFSQIVEWFLPRLEN*MCICTA
Trigger: GGCTGTGCAGATGCACATCCAGTTCTCCAGTCGGGG...CAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCACTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp GTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGGCATTGTTGGAGTGGGTaGAAAAGGGTGTGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: VAGVLGFIQLENLGEGERHCWSG*KRVCLP
Trigger: TGGCAAGCACACCCTTTTCCACCCACTCCAACAATG...CCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGTGTTTGCAAAGATCTaGGGGGCAAAGACTCCACCG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSVFAKI*GAKTPP
Trigger: CGGTGGAGTCTTTGCCCCTCAGATCTTTGCAAACAC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTGTCCTTGGGCTTCATaGAAGCCAACTCCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSCPWAS*KPTPGK
Trigger: CTTACCAGGAGTTGGCTTTCATGAAGCCCAAGGACA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGCCAACAGGTGTTCTTaGCATCCAGGATACCCCCGC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRANRCS*HPGYPR
Trigger: GCGGGGGTATCCTGGATGTCAAGAACACCTGTTGGC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAGCAAGGCAGGTCATaGCTCTGTCGATGCGACGCC +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITQQGRS*LCRCDA
Trigger: GGCGTCGCATCGACAGAGTCATGACCTGCCTTGCTG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGGACTTGTCAAAGTTaGCATCCAGCATGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQGTCQS*HPACPP
Trigger: AGGCGGGCATGCTGGATGTCAACTTTGACAAGTCCC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTACCAGCAGCTTCTCTaGCATCTCTTGGGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGYQQLL*HLLGSP
Trigger: TGGCGAGCCCAAGAGATGTCAGAGAAGCTGCTGGTA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCATAGGAGTTGGTCATaGTGGTCACCACATCCTGGT +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSHRSWS*WSPHPG
Trigger: ACCAGGATGTGGTGACCATCATGACCAACTCCTATG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGTAACTTGCGCTTGGTaGGAATGTCAGGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGVTCAW*ECQGGG
Trigger: GCCACCTCCCTGACATTCTCACCAAGCGCAAGTTAC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGGGTCTGGATCTTCTTaGTGTCCTCATCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLGSGSS*CPHLAP
Trigger: TGGAGCAAGATGAGGACATCAAGAAGATCCAGACCC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCACATGTCCCAGGTCTTaGGGTAGTTCTGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGTCPRS*GSSAAG
Trigger: GCCTGCTGCAGAACTACCTCAAGACCTGGGACATGT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCAACCCACTCCCCGTTaGGACTGTCCAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRQPTPR*DCPASP
Trigger: TGGAGATGCTGGACAGTCTCAACGGGGAGTGGGTTG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCTTTGGCTAATTTTGTaGGGCGACGAAACAGCCCGT +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSELWLIL*GDETAR
Trigger: ACGGGCTGTTTCGTCGCCTCACAAAATTAGCCAAAG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCCCTTTGGCTAATTTTGTaGGGCGACGAAACAGCCCGT +
Preference number: 4 (lower is better)
Translates to: LKILSGGSQCTRRRPRTSLWLIL*GDETAR
Trigger: ACGGGCTGTTTCGTCGCCTCACAAAATTAGCCAAAG...GGATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp GAGGCCACTCTTGTAAAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTGGTACTATGTCGAGCTaGGTCACATCCCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: EATLVKLLQHIPGMNFYRGTMSS*VTSQVL
Trigger: CAAGACCTGGGATGTGACTCAGCTCGACATAGTACC...ACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTTTACAAGAGTGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGGCCTTGACAAAGCGTaGTGCCTTCATGGTAGACAG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSGLDKA*CLHGRQ
Trigger: CTGTCTACCATGAAGGCATCACGCTTTGTCAAGGCC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGGTGTTCATCCTGTCCATaGTGGCTTTCCAGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VAGVLGFIQLENLGEGERCSSCP*WLSSCC
Trigger: ACAGCAACTGGAAAGCCATCATGGACAGGATGAACA...CCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTCAGCAGGCACTTGGTaGCATCAGCCGTCCACTGGA +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRSAGTW*HQPSTG
Trigger: TCCAGTGGACGGCTGATGTCACCAAGTGCCTGCTGA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTGTTGGTCTGGCGGATaGCACAGTCATCAAGATCCT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLCWSGG*HSHQDP
Trigger: AGGATCTTGATGACTGTGTCATCCGCCAGACCAACA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCTGCTGCACAGCCAGTaGGTAGAGTGTGTACACCTT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSLLHSQ*VECVHL
Trigger: AAGGTGTACACACTCTACTCACTGGCTGTGCAGCAG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACCCCTCTTTATTTCCAGACCCCTCTTAGGTACGTGCATTTGTCCCTTCTCTCACTGCTGCACAGCCAGTaGGTAGAGTGTGTACACCTT +
Preference number: 4 (lower is better)
Translates to: TPLYFQTPLRYVHLSLLSLLHSQ*VECVHL
Trigger: AAGGTGTACACACTCTACTCACTGGCTGTGCAGCAG...TGAGAGAAGGGACAAATGCACGTACCTAAGAGGGGTCTGGAAATAAAGAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGCTTGCCATAGTCAATaGCAGGCAGCTCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEACHSQ*QAAQCW
Trigger: CCAACATTGAGCTGCCTGTCATTGACTATGGCAAGC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTTTCGAACATGCGTTaGAGGGGCTCCACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLFSNMR*RGSTSA
Trigger: GGCTGAGGTGGAGCCCCTTCAACGCATGTTCGAAAA...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTCATCTCTACCATGGTaGCATAGTTCTCGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLSSLPW*HSSRRQ
Trigger: CTGACGGCGAGAACTATGTCACCATGGTAGAGATGA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGACGGTGGGCACCATaGTCTTATAGAAGGGGGCGT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRRRWAP*SYRRGR
Trigger: ACGCCCCCTTCTATAAGATCATGGTGCCCACCGTCG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTGCCGAATATGCGGATaGTCTGGGACTTTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSCRICG*SGTLWG
Trigger: TCCCCACAAAGTCCCAGATCATCCGCATATTCGGCA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGGATCCAGAGCCGTGTaGTGCTGGACTTGGTATCAT +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSGSRAV*CWTWYH
Trigger: ATGATACCAAGTCCAGCATCACACGGCTCTGGATCC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTCCGATAATGTTTGGTaGCCTCGATCTGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSSDNVW*PRSGRW
Trigger: CCACCTTCCAGATCGAGGTCACCAAACATTATCGGA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCCCGGGCCTGGTCTATaGTATGCGACTGGATCTCTT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGPGPGL*YATGSL
Trigger: AAGAGATCCAGTCGCATATCATAGACCAGGCCCGGG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGAAGAGGCTGTCCGATaGCTCAGGCACCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITEEAVR*LRHLLH
Trigger: GTGGAGCAGGTGCCTGAGTCATCGGACAGCCTCTTC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGGTATTTGGTGGGTGTaGCATAGTTGTGTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEGIWWV*HSCVSA
Trigger: TGCGGAGACACAACTATGTCACACCCACCAAATACC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGATGTTGATGACCAGTaGGTCCTTCTGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSDVDDQ*VLLLLQ
Trigger: CTGGAGGAGCAGAAGGACTCACTGGTCATCAACATC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACATCCTCCAGCTCCTTaGGCTTCCTTTTACCAGCCG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQHPPAP*ASFYQP
Trigger: CGGCTGGTAAAAGGAAGCTCAAGGAGCTGGAGGATG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTGGGGATCGTGGGGTTaGATCCTCCAGCACCGACTT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWWGSWG*ILQHRL
Trigger: AAGTCGGTGCTGGAGGATTCAACCCCACGATCCCCA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGCTCAGCAAGTTTTCTaGCACCTCAAAGTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSAQQVF*HLKVGV
Trigger: GACTCCGACTTTGAGGTGTCAGAAAACTTGCTGAGC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTGCCATCCTTGGGGATaGAATAAGTCTCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSCHPWG*NKSPVL
Trigger: CAGCACTGGAGACTTATTTCATCCCCAAGGATGGCA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCCCCTCTTGATCCAATaGTCAGGTGTCATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGPLLIQ*SGVMAP
Trigger: TGGGGCCATGACACCTGATCATTGGATCAAGAGGGG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTTGGGGAGCTCAGCCTaGAGCTCTGGCTCACTGACA +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWLGSSA*SSGSLT
Trigger: TGTCAGTGAGCCAGAGCTGCAGGCTGAGCTCCCCAA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTCCAGAATGGCATCATaGTCCTGTGTCCACACTGCA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSSRMAS*SCVHTA
Trigger: TGCAGTGTGGACACAGGAGCATGATGCCATTCTGGA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCCAGAATGGCATCATaGTCCTGTGTCCACACTGCA +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSESRMAS*SCVHTA
Trigger: TGCAGTGTGGACACAGGAGCATGATGCCATTCTGGA...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTGGGTCTGTACAGGCATaGCCAGCTCTAGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLIGSVQA*PALASA
Trigger: GGCTGAAGCTAGAGCTGGGCATGCCTGTACAGACCC...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGGTGATGGGAACTGGTaGTTGGCGAATGAAGTAGAC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEGDGNW*LANEVD
Trigger: GTCTACTTCATTCGCCAAGCACCAGTTCCCATCACC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCCCAAACTGCACAGTTaGCTCGAAGTTCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSPKLHS*LEVLPG
Trigger: ACCTGGGAGAACTTCGAGGCAACTGTGCAGTTTGGG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCATGTTCATGGCCTCTaGAGGGATGTAGAGGACCGT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSHVHGL*RDVEDR
Trigger: ACGGTCCTCTACATCCCTGCAGAGGCCATGAACATG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGGTCCATGCATCGGTTaGGCCAGAACTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSGPCIG*ARTQSP
Trigger: AGGAGATTGAGTTCTGGCGCAACCGATGCATGGACC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGTGCCAGACAGGTCCATaGATCGGTTGCGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: LVAEQRHHWFSQIVEWFLCQTGP*IGCART
Trigger: AGTTCTGGCGCAACCGATGCATGGACCTGTCTGGCA...CAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCACTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCCCTTCTTCACCAGCTaGTTACTGATGCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSPFFTS*LLMPDR
Trigger: CCTGTCTGGCATCAGTAAGCAGCTGGTGAAGAAGGG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTCGACGCCGGAGGATGTaGACCCAGCGCGCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFRRRRM*TQRAFP
Trigger: CGGAAAGGCGCGCTGGGTGCACATCCTCCGGCGTCG...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACATATCCAACCGCCGAATaGAATCCTTGTCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATYPTAE*NPCPDL
Trigger: CAAGTCTGGACAAGGATTGCATTCGGCGGTTGGATA...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGATTTTCACGCAGAATaGGCAGGTCCTCGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQDFHAE*AGPRLA
Trigger: AGCGAGCCGAGGACCTGCGCATTCTGCGTGAAAATC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTCATTGACCACACCTaGCAAAGTCTGCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSVIDHT*QSLQSG
Trigger: CCCACTCTGCAGACTTTGGCAGGTGTGGTCAATGAC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCATTCATTGCAGTGCTaGACCAGGGAGAACTTGAGG +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEHSLQC*TRENLR
Trigger: CCTCAAGTTCTCCCTGGTGCAGCACTGCAATGAATG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTGCCATTCATTGCAGTaGTGCACCAGGGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLCHSLQ*CTRENL
Trigger: CAAGTTCTCCCTGGTGCAGCACTGCAATGAATGGCA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGTCGCGAACTTGTTCTaGCATTCATTGCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEVANLF*HSLQCC
Trigger: GCAGCACTGCAATGAATGGCAGAACAAGTTCGCGAC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGCGGCTGATTTTCTCTaGGTTCTCCTTCAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSAADFL*VLLQVG
Trigger: ACCTACCTGAAGGAGAACGCAGAGAAAATCAGCCGC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGCGATCTCCCAGATTTaGTGGAGGGCATCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRAISQI*WRASSS
Trigger: GGAGCTCGATGCCCTCCAGCAAATCTGGGAGATCGC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACTCCTCCCAGTCTCGTaGGATCTCCCAGATTTGCTG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQLLPVS*DLPDLL
Trigger: CAGCAAATCTGGGAGATCGCACGAGACTGGGAGGAG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACCCCTCTTTATTTCCAGACCCCTCTTAGGTACGTGCATTTGTCCCTTCTCTCATTTTTGAGGTGTGGCTaGACAGCCTCTGGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: TPLYFQTPLRYVHLSLLSFLRCG*TASGFR
Trigger: CCGAAACCCAGAGGCTGTGCAGCCACACCTCAAAAA...TGAGAGAAGGGACAAATGCACGTACCTAAGAGGGGTCTGGAAATAAAGAGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCCACAGCTTCCCATTTaGTGCTGGGCCCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWPQLPI*CWALQP
Trigger: AGGTTGGAGGGCCCAGCAGCAAATGGGAAGCTGTGG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACCCCCTCGGTGCAGGTaGAATGCCGTGGTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATPPRCR*NAVVSV
Trigger: GACACTGACCACGGCATTGCACCTGCACCGAGGGGG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCATACCTCTGGGTGCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGAAAGAGAATGATTTCTaGAATGAGGGTGGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: FIPLGAQTRVLPHASVRTKENDF*NEGGVR
Trigger: CCTGACTCCACCCTCATTGCAGAAATCATTCTCTTT...CGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGCACCCAGAGGTATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCTTGGCCAGAATCTTaGAGTTGCCAAAGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSESWPES*SCQSPL
Trigger: GAGAGGGCTTTGGCAACTGCAAGATTCTGGCCAAGA...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTCTTGGCCAGAATCTTaGAGTTGCCAAAGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSSWPES*SCQSPL
Trigger: GAGAGGGCTTTGGCAACTGCAAGATTCTGGCCAAGA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGGGAGGCCTGTAGAATaGGCCATGAGGCAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWGRPVE*AMRQSC
Trigger: GCAAGACTGCCTCATGGCGCATTCTACAGGCCTCCC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTTTCTCATCTGCACATaGCGTCCGCATGACACTGGA +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLFLICT*RPHDTG
Trigger: TCCAGTGTCATGCGGACGGCATGTGCAGATGAGAAA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTTTCTCATCTGCACATaGCGTCCGCATGACACTGGA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSFLICT*RPHDTG
Trigger: TCCAGTGTCATGCGGACGGCATGTGCAGATGAGAAA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGGCCGGAGAGGCCATTaGCAGGTCCTCCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRGRRGH*QVLHFK
Trigger: TTTGAAGTGGAGGACCTGGCAATGGCCTCTCCGGCC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGGAAGAGCACTAGCTaGATGGGCACGACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRRKSTS*MGTTEG
Trigger: ACCCTCTGTCGTGCCCATGCAGCTAGTGCTCTTCCG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCAGGCAGAGCACGATGTaGAGGTTGTTCTGCACGCGT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGRQSTM*RLFCTR
Trigger: ACGCGTGCAGAACAACCTGCACATCGTGCTCTGCCT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTAGGTACTCCTCACACTaGTTCTGGAACTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSRYSSH*FWNSAT
Trigger: GGTGGCTGAGTTCCAGAAGCAGTGTGAGGAGTACCT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTTCTGTTCCCCTAGCTaGCTCTTGGCCTCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGFCSPS*LLASAH
Trigger: ATGGGCAGAGGCCAAGAGGCAGCTAGGGGAACAGAA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATCACTGGTCTCCAGCTaGTCAGTCACCTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQSLVSS*SVTSVA
Trigger: AGCCACAGAGGTGACTGAGCAGCTGGAGACCAGTGA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCCTCCAGCTTATTGCTaGGGTGGCTTTTGTCAATGC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLPPAYC*GGFCQC
Trigger: GCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTATGTGCTCTGCCAGCTaGAGCAGGGCACTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIMCSAS*SRALVG
Trigger: CCCCACCAGTGCCCTGCTGCAGCTGGCAGAGCACAT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATGGGCCATGCCCATGTaGTCTGCCAGCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATWAMPM*SASCSR
Trigger: CCTGCTGCAGCTGGCAGAGCACATGGGCATGGCCCA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTGGCGAGCTGAAGACTaGAGCACAGCAGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGWRAED*STAVRK
Trigger: CTTCCTCACTGCTGTGCTGCAGTCTTCAGCTCGCCA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTGGCGAGCTGAAGACTaGAGCACAGCAGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLWRAED*STAVRK
Trigger: CTTCCTCACTGCTGTGCTGCAGTCTTCAGCTCGCCA...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAAGGCTCGGTCTGAGCTaGCTGCCCGGTTGGGATAGT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITRLGLS*LPGWDS
Trigger: ACTATCCCAACCGGGCAGGCAGCTCAGACCGAGCCT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGGAGACTACAGGCTTGTaGCACCACGCCCAGCTAATC +
Preference number: 4 (lower is better)
Translates to: LVAEQRHHWFSQIVEWFLETTGL*HHAQLI
Trigger: GATTAGCTGGGCGTGGTGGCACAAGCCTGTAGTCTC...CAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCACTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATTCCCTCCTTCCCTCTaGCCCCGACACACACCTTGC +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITFPPSL*PRHTPC
Trigger: GCAAGGTGTGTGTCGGGGGCAGAGGGAAGGAGGGAA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGCTCAGGCTCCTCCTTaGGGAGCTCAGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFAQAPP*GAQPAA
Trigger: AGCTGCAGGCTGAGCTCCCCAAGGAGGAGCCTGAGC...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGCTCAGGCTCCTCCTTaGGGAGCTCAGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATAQAPP*GAQPAA
Trigger: AGCTGCAGGCTGAGCTCCCCAAGGAGGAGCCTGAGC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACACAAAGTGTTCCAGAATaGCATCATGCTCCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATQSVPE*HHAPVS
Trigger: GGACACAGGAGCATGATGCCATTCTGGAACACTTTG...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCCAGGTGATGGGAACTaGTGCTTGGCGAATGAAGTA +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEPGDGN*CLANEV
Trigger: TACTTCATTCGCCAAGCACCAGTTCCCATCACCTGG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCCAAGTAGGACGACTTaGCAAGGTGCAGGATGGATT +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEPSRTT*QGAGWI
Trigger: AATCCATCCTGCACCTTGCCAAGTCGTCCTACTTGG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGAACCAGCTCATCAATaGCCTGGACCATCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSEPAHQ*PGPSAD
Trigger: ATCAGCAGATGGTCCAGGCCATTGATGAGCTGGTTC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCTGATTCGCAGCAATaGGGTATCCAACCGCCGAAT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSADSQQ*GIQPPN
Trigger: ATTCGGCGGTTGGATACCCCATTGCTGCGAATCAGC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATATCCAGCAGCACAAACTaGATGTTGGTGACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SHCWSGWKRVCLPVREFISSSTN*MLVTVS
Trigger: GGAGACAGTCACCAACATCCAGTTTGTGCTGCTGGA...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGACACTGTCCTCGACTaGCACCTCGTACTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLDTVLD*HLVLFK
Trigger: CTTGAAAAGTACGAGGTGCCAGTCGAGGACAGTGTC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTCCAGCAGAGTTTGTTaGAAGACAACCCACTCCCCG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSSSRVC*KTTHSP
Trigger: CGGGGAGTGGGTTGTCTTCCAACAAACTCTGCTGGA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAAGGTCCTTGGAGGGTaGCTGCTCGATCTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEKVLGG*LLDLED
Trigger: ATCTTCAAGATCGAGCAGCCACCCTCCAAGGACCTT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTCTGGGTTTCGGGACTaGCCCAGAATCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWSGFRD*PRISSR
Trigger: CCTGCTGGAGATTCTGGGCCAGTCCCGAAACCCAGA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATGGCTGCACAGCCTCTaGGTTTCGGGACTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATWLHSL*VSGLAQ
Trigger: CTGGGCCAGTCCCGAAACCCAGAGGCTGTGCAGCCA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGGCCCTCCAACCTTCTaGATTCTCAGCAACTTGATG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLGPPTF*ILSNLM
Trigger: CATCAAGTTGCTGAGAATCCAGAAGGTTGGAGGGCC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACTTCCCATTTGCTGCTaGGCCCTCCAACCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQLPICC*ALQPSG
Trigger: TCCAGAAGGTTGGAGGGCCCAGCAGCAAATGGGAAG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCTTCCCATTTGCTGCTaGGCCCTCCAACCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLLPICC*ALQPSG
Trigger: TCCAGAAGGTTGGAGGGCCCAGCAGCAAATGGGAAG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGCAGGGTCACCCTCATaGTCTGTTCCACATCGCCAA +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGAGSPS*SVPHRQ
Trigger: TTGGCGATGTGGAACAGACCATGAGGGTGACCCTGC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTGCAGGGTCACCCTCATaGTCTGTTCCACATCGCCAA +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLAGSPS*SVPHRQ
Trigger: TTGGCGATGTGGAACAGACCATGAGGGTGACCCTGC...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTAGTACATTCGGCCCATaGACTTGTAGTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSSTFGP*TCSPGP
Trigger: AGGGCCTGGACTACAAGTCCATGGGCCGAATGTACT...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTAGTCAGGCACCACCATaGCAATTGGGCGGAACATGG +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLSQAPP*QLGGTW
Trigger: CCATGTTCCGCCCAATTGCCATGGTGGTGCCTGACT...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTACGATCATGGTGGAGTaGCGGGAGTTCTTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSTIMVE*REFLVS
Trigger: TGAAACCAAGAACTCCCGCCACTCCACCATGATCGT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCTAGGGACAATGCCTTaGGGTTCAAAGGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSLGTMP*GSKGTL
Trigger: GAGAGTTCCCTTTGAACCCCAAGGCATTGTCCCTAG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGCAGCGGGATACAGTaGCCGGAGAGGCCATTGCCA +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIRSGIQ*PERPLP
Trigger: TGGCAATGGCCTCTCCGGCCACTGTATCCCGCTGCG...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTAGCAGAATGGGATTCTaGTTGGCCACCAAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSSRMGF*LATKLL
Trigger: GAGCAGCTTGGTGGCCAACCAGAATCCCATTCTGCT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGAACGCTCTGGGCGATaGAGGTCTTCCCAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITERSGR*RSSQSP
Trigger: TGGGGACTGGGAAGACCTCCATCGCCCAGAGCGTTC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGCACGTAGACACCCTTaGTTCGCTTCTCAACCCTGC +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQARRHP*FASQPC
Trigger: GCAGGGTTGAGAAGCGAACCAAGGGTGTCTACGTGC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGCTTTTGCCCCCGAATaGCACGTAGACACCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQAFAPE*HVDTLG
Trigger: ACCAAGGGTGTCTACGTGCCATTCGGGGGCAAAAGC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGATCAGCTCCAGGGGTaGCTGGGACCCAAACATGTC +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWDQLQG*LGPKHV
Trigger: GACATGTTTGGGTCCCAGCCACCCCTGGAGCTGATC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTCACCACGTTCCCAATaGGCTTCACCTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLSPRSQ*ASPLPQ
Trigger: TTGAGGAAGAGGTGAAGCCCATTGGGAACGTGGTGA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCAGAGGTAATGCATCTTaGTGGGCGTGGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGRGNAS*WAWAGS
Trigger: GCTTCCTGCCCACGCCCACCAAGATGCATTACCTCT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGGTCTTCATACACCTTaGGCTCCTTCAGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLGLHTP*APSGNP
Trigger: GGGATTTCCTGAAGGAGCCCAAGGTGTATGAAGACC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTGGTGTAGTCGCAGATaGATGAAGCCAGGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRWCSRR*MKPGGP
Trigger: TGGCCCGCCTGGCTTCATCCATCTGCGACTACACCA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTGCTCCACCCGGGCCTaGTCTATGATATGCGACTGG +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRCSTRA*SMICDW
Trigger: CCAGTCGCATATCATAGACCAGGCCCGGGTGGAGCA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTACCAAGGCTGGGTACTaGCGGATCCAGTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLTKAGY*RIQFLK
Trigger: CTTCAGGAACTGGATCCGCCAGTACCCAGCCTTGGT...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCCTCACACTGCTTCTaGAACTCAGCCACCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSESSHCF*NSATFF
Trigger: GAAGAAGGTGGCTGAGTTCCAGAAGCAGTGTGAGGA...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGCCCATACAGCTCCATaGCCCGCACCCACATGCAGA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITAHTAP*PAPTCR
Trigger: TCTGCATGTGGGTGCGGGCCATGGAGCTGTATGGGC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTCATTCGGATTCGCTTaGGCTCCACCACCCGATATA +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLSFGFA*APPPDI
Trigger: TATATCGGGTGGTGGAGCCCAAGCGAATCCGAATGA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGCAGCTTCTTATATTTaGCAGGTTTGGAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEAASYI*QVWSSG
Trigger: CCCGCTGCTCCAAACCTGCCAAATATAAGAAGCTGC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGCTGACAACCGGTaGAAGGGAGTTGATAGAGAC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLSADNR*KGVDRD
Trigger: GTCTCTATCAACTCCCTTCCACCGGTTGTCAGCACT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTACTGCTCCACACGCATaGCCAAGTCCCGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQITAPHA*PSPGSR
Trigger: CCTGGACCCGGGACTTGGCCATGCGTGTGGAGCAGT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATCTGCAGGCCGGAAGTaGATCGTGGGCATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITSAGRK*IVGMRQ
Trigger: CTGCCTCATGCCCACGATCCACTTCCGGCCTGCAGA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAAGGAGTACATGCCCTTaGCGCTCTTCTTGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQRSTCP*RSSCGS
Trigger: AGAGCCGCAAGAAGAGCGCCAAGGGCATGTACTCCT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATAATCTCCCAGATTTGCTaGAGGGCATCGAGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SHCWSGWKRVCLPVREFIISQIC*RASSSF
Trigger: AAAGGAGCTCGATGCCCTCCAGCAAATCTGGGAGAT...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp GAGTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGTGAATTCATACCTCTaGGTGCACAAACGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: EWREFLVSYNWKTLVRVNVNSYL*VHKRGS
Trigger: GGACCCTCGTTTGTGCACCCAGAGGTATGAATTCAC...GTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp CTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCCCTCGCATTGTTGGAGTaGGTGGAAAAGGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LKILSGGSQCTRRRPRTSLALLE*VEKGVL
Trigger: AAGCACACCCTTTTCCACCCACTCCAACAATGCGAG...GGATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCGAGGAAGGTCACAGTaGTGCCTCTCTCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSRGRSQ*CLSQKG
Trigger: ACCTTTCTGAGAGAGGCACCACTGTGACCTTCCTCG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572933.5
3UTR CAA 72 bp CAGTTGCTGTTGACCTGGTCAAATAAGGTCGATTCATaGGGCAGCTGCTTGCGGATGTCTTCTCCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: QLLLTWSNKVDS*GSCLRMSSPRK
Trigger: CTTCCTAGGAGAAGACATCCGCAAGCAGCTGCCCAATGAATCGACCTTATTTGACCAGGTCAACAGCAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 72 bp AGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATaGAACAGGGGTGCATCAACTGAAGTGAGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: SSMLGNRSCTMA*NRGASTEVSLA
Trigger: CGCCAAGCTCACTTCAGTTGATGCACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 72 bp CGCATGACACTGGACAAGATGCCATCTGTCCATTCATaGGTGCTGAGGTCATATTCCCCATACAGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: RMTLDKMPSVHS*VLRSYSPYSSP
Trigger: AGGGGAACTGTATGGGGAATATGACCTCAGCACCAATGAATGGACAGATGGCATCTTGTCCAGTGTCATGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTGCCTCGGGCTCCACTaGTTCTTCACTCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWCLGLH*FFTLCL
Trigger: CAAGCACAGAGTGAAGAATCAGTGGAGCCCGAGGCA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTCACCAGCTGCTTACTaGTGCCAGACAGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRSPAAY*CQTGPC
Trigger: GCATGGACCTGTCTGGCATCAGTAAGCAGCTGGTGA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTCACCTCCAGGTCCTTaGTTCCGGCACGGAACTTAT +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLSPPGP*FRHGTY
Trigger: ATAAGTTCCGTGCCGGAATCAAGGACCTGGAGGTGA...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCAGCAAGGCAGGTCATaGCTCTGTCGATGCGACGCC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIQQGRS*LCRCDA
Trigger: GGCGTCGCATCGACAGAGTCATGACCTGCCTTGCTG...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGATCCTTGTCCAGACTTaGTGTCCACTCTTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEILVQT*CPLLEG
Trigger: ACCTTCCAAGAGTGGACATCAAGTCTGGACAAGGAT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGGGACTTGTCAAAGTTaGCATCCAGCATGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRGTCQS*HPACPP
Trigger: AGGCGGGCATGCTGGATGTCAACTTTGACAAGTCCC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGCCGAATACGCTCTTTaGATAGGGCCTGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQAEYAL*IGPAHL
Trigger: CAGATGAGCAGGCCCTATTCAAAGAGCGTATTCGGC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCATAGGAGTTGGTCATaGTGGTCACCACATCCTGGT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSHRSWS*WSPHPG
Trigger: ACCAGGATGTGGTGACCATCATGACCAACTCCTATG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAGTCTGCAGAGTGGGTaGGAATTCCACCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRSLQSG*EFHLCH
Trigger: GTGGCACAGGTGGAATTCTCACCCACTCTGCAGACT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCAAACTGGATGTTGGTaGCTGTCTCCTCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSQTGCW*LSPPSA
Trigger: TGCAGAAGGAGGAGACAGTCACCAACATCCAGTTTG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGAGGCATGGTCCTCTTaGACTGCTCTATTTTTGAGC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSEAWSS*TALFLS
Trigger: GCTCAAAAATAGAGCAGTTCAAGAGGACCATGCCTC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTGAGGCATGGTCCTCTTaGACTGCTCTATTTTTGAGC +
Preference number: 4 (lower is better)
Translates to: TGSSMLGNRSCTMALNRGEAWSS*TALFLS
Trigger: GCTCAAAAATAGAGCAGTTCAAGAGGACCATGCCTC...ACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp CTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCCAAGCTTTCAGATTCCTaGTCAAACTCCCGCTGGATC +
Preference number: 4 (lower is better)
Translates to: LKILSGGSQCTRRRPRTSKLSDS*SNSRWI
Trigger: GATCCAGCGGGAGTTTGATCAGGAATCTGAAAGCTT...GGATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTATTTTCTCCACATGCTaGTCCATCCCAAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSIFSTC*SIPSST
Trigger: TGTGGAGCTTGGGATGGATCAGCATGTGGAGAAAAT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCAGCTCTTTAGTTGCTaGAGCAGAGATCTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEQLFSC*SRDLPN
Trigger: ATTGGGGAGATCTCTGCTTCAGCAACTAAAGAGCTG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCCTTCTCAAAGGCCTTaGCAAAGCGTGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSPSQRP*QSVMPS
Trigger: TGAAGGCATCACGCTTTGTCAAGGCCTTTGAGAAGG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTTCTAAGTACATCCACTaGCGCTGCACTGTGAGAATC +
Preference number: 4 (lower is better)
Translates to: TGSSMLGNRSCTMALNRGSKYIH*RCTVRI
Trigger: GATTCTCACAGTGCAGCGTCAGTGGATGTACTTAGA...ACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCTTTCCAGTTGCTGTTaGCCTGGTCAAATAAGGTCG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSLSSCC*PGQIRS
Trigger: CGACCTTATTTGACCAGGTCAACAGCAACTGGAAAG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCAAAATGGAAATGGGTaGGGCCGGCAGCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIQNGNG*GRQPGQ
Trigger: CTGCCCTGGCTGCCGGCCTCACCCATTTCCATTTTG...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCTGCTGCACAGCCAGTaGGTAGAGTGTGTACACCTT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGLLHSQ*VECVHL
Trigger: AAGGTGTACACACTCTACTCACTGGCTGTGCAGCAG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACGACGGTGGGCACCATaGTCTTATAGAAGGGGGCGT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITRRWAP*SYRRGR
Trigger: ACGCCCCCTTCTATAAGATCATGGTGCCCACCGTCG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTCTGTGCGGACATGTTaGCAACGAGCACCGACCACT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRSVRTC*QRAPTT
Trigger: AGTGGTCGGTGCTCGTTGTCAACATGTCCGCACAGA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGGATCCAGAGCCGTGTaGTGCTGGACTTGGTATCAT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGGSRAV*CWTWYH
Trigger: ATGATACCAAGTCCAGCATCACACGGCTCTGGATCC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCATTGGGCACCTCGCCTaGGCTGAGGATGTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGIGHLA*AEDVVD
Trigger: ATCAACAACATCCTCAGCTCAGGCGAGGTGCCCAAT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTCTGCACGCGTTCAATaGGGTAGGCGAAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWSARVQ*GRRRGC
Trigger: ACAGCCTCTTCGCCTACCTCATTGAACGCGTGCAGA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAGGTCTACTCCTATaGGGCACTTCTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRPGLLL*GTSQPP
Trigger: AGGTGGCTGAGAAGTGCCTCATAGGAGTAGACCTGG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCCAGTGCCTGACACTTaGTTTCCTCAACTGCAATCT +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSPVPDT*FPQLQS
Trigger: AGATTGCAGTTGAGGAAATCAAGTGTCAGGCACTGG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGGGAGACGCGGCCGATaGTATCAGGCTGGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATGRRGR*YQAGSQ
Trigger: CTGACTTCCAGCCTGATATCATCGGCCGCGTCTCCC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTGCTTCTCCCGAAGCTaGGCCAAGGCAGCGTTCATT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRCFSRS*AKAAFI
Trigger: AATGAACGCTGCCTTGGCTCAGCTTCGGGAGAAGCA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCGATCCAGATTTGGTTaGCAATCTCATCCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLRSRFG*QSHPGS
Trigger: ACTACCGGGATGAGATTGTCAACCAAATCTGGATCG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATCATCTGCAGGTCGATaGTCTTCAGGCCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITSSAGR*SSGPGL
Trigger: GAGGCCAGGGCCTGAAGATCATCGACCTGCAGATGA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGACCGGGTATCCAAAGTaGATGGCGTGTTCTAGGATT +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSETGYPK*MACSRI
Trigger: AATCCTAGAACACGCCATTCACTTTGGATACCCGGT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTATTCCTGCACGTTCTaGAGTAGCACCGGGTATCCA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSYSCTF*SSTGYP
Trigger: TGGATACCCGGTGCTACTTCAGAACGTGCAGGAATA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTCACCTCTGTGGCTGTaGTCTTGGAGGTATGCAGCG +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWSPLWL*SWRYAA
Trigger: CGCTGCATACCTCCAAGATCACAGCCACAGAGGTGA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGCTCAAAGGAGTTCATaGGTCCGTGGAAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSAQRSS*VRGSWS
Trigger: TGACCAACTTCCACGGACTCATGAACTCCTTTGAGC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAGGCATCCAAGACAGTaGCAGGTGGCAGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRRHPRQ*QVAVCQ
Trigger: CTGGCAAACTGCCACCTGTCACTGTCTTGGATGCCT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTGCTGACCTGCAAGATTaGGATAGGGAAGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLADLQD*DREVWV
Trigger: CACCCAGACTTCCCTATCTCAATCTTGCAGGTCAGC...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCTCAGCAAGTTTTCTaGCACCTCAAAGTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSAQQVF*HLKVGV
Trigger: GACTCCGACTTTGAGGTGTCAGAAAACTTGCTGAGC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCTGGTGGGTGTAATCTaGGGTTGCAAGGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLLVGVI*GCKESK
Trigger: TTTGCTTTCCTTGCAACCTCAGATTACACCCACCAG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTAGCCAGTGGGAAAGGTaGAACCAGACAACCAGAAGA +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSSQWER*NQTTRR
Trigger: TCTTCTGGTTGTCTGGTTTCACCTTTCCCACTGGCT...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGAGCAGTGCCCCTCTTaGTCCAATGATCAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQEQCPS*SNDQVS
Trigger: TGACACCTGATCATTGGATCAAGAGGGGCACTGCTC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTGCCGGGGCATTCCCCTaGTCCTGTGTGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFAGAFP*SCVATA
Trigger: TGCTGTGGCCACACAGGAGCAGGGGAATGCCCCGGC...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCGCACCGTCCCAAACTaGACAGTTGCCTCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWRTVPN*TVASKF
Trigger: GAACTTCGAGGCAACTGTGCAGTTTGGGACGGTGCG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTCGCACCGTCCCAAACTaGACAGTTGCCTCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLIRTVPN*TVASKF
Trigger: GAACTTCGAGGCAACTGTGCAGTTTGGGACGGTGCG...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTAGGCCAGCCTGTGTTTaGAAAGATCTGAGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSRPACV*KDLRGK
Trigger: TTTGCCCCTCAGATCTTTGCAAACACAGGCTGGCCT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCATGTTCATGGCCTCTaGAGGGATGTAGAGGACCGT +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLHVHGL*RDVEDR
Trigger: ACGGTCCTCTACATCCCTGCAGAGGCCATGAACATG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTAGCATCTCCTTTATCTaGCGGGTCCAGTGGATCATG +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSSISFI*RVQWIM
Trigger: CATGATCCACTGGACCCGGCAGATAAAGGAGATGCT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTGCCAGACAGGTCCATaGATCGGTTGCGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRCQTGP*IGCART
Trigger: AGTTCTGGCGCAACCGATGCATGGACCTGTCTGGCA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAGGATGGATTCAACGTaGTTCACTCCCTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSERMDST*FTPFFT
Trigger: GGTGAAGAAGGGAGTGAAGCACGTTGAATCCATCCT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTGACGACTTGGCAAGGTaGAGGATGGATTCAACGTGC +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLDDLAR*RMDSTC
Trigger: GCACGTTGAATCCATCCTGCACCTTGCCAAGTCGTC...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACAAGGAAGGGGACCCTaGTTGCCATCTTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATQGRGP*LPSSQR
Trigger: CCGCTGGGAAGATGGCAAGCAGGGTCCCCTTCCTTG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTATCCAACCGCCGAATaGAATCCTTGTCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSYPTAE*NPCPDL
Trigger: CAAGTCTGGACAAGGATTGCATTCGGCGGTTGGATA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTATCCAACCGCCGAATaGAATCCTTGTCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLYPTAE*NPCPDL
Trigger: CAAGTCTGGACAAGGATTGCATTCGGCGGTTGGATA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTTTCTGCTGTACAGCTaGCCGATGCTCTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSFLLYS*PMLSLV
Trigger: GACCAAAGAGAGCATCGGGCAGCTGTACAGCAGAAA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGTCACCACATCCTGGTaGAGGTTCATCAATTTCTGC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSVTTSW*RFINFC
Trigger: GCAGAAATTGATGAACCTGCACCAGGATGTGGTGAC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGTCATTGACCACACCTaGCAAAGTCTGCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQVIDHT*QSLQSG
Trigger: CCCACTCTGCAGACTTTGGCAGGTGTGGTCAATGAC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCACCAGAGCCACAATCATTCATTGCAGTGCTaGACCAGGGAGAACTTGAGG +
Preference number: 4 (lower is better)
Translates to: KLLQHIPGMNFYRHQSHNHSLQC*TRENLR
Trigger: CCTCAAGTTCTCCCTGGTGCAGCACTGCAATGAATG...ATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCTTCTTGAAGTCATCTaGCGAGTGGATCAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSLLEVI*RVDQAC
Trigger: ACAGGCCTGATCCACTCGGCAGATGACTTCAAGAAG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCTCCTCCCAGTCTCGTaGGATCTCCCAGATTTGCTG +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWLLPVS*DLPDLL
Trigger: CAGCAAATCTGGGAGATCGCACGAGACTGGGAGGAG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTCCATGGTTTCCGTCTaGAGGATCAGGAACCGGCCA +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRSMVSV*RIRNRP
Trigger: TGGCCGGTTCCTGATCCTGCAGACGGAAACCATGGA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTTTTTGAGGTGTGGCTaGACAGCCTCTGGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGFLRCG*TASGFR
Trigger: CCGAAACCCAGAGGCTGTGCAGCCACACCTCAAAAA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTTTTGAGGTGTGGCTaGACAGCCTCTGGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLFLRCG*TASGFR
Trigger: CCGAAACCCAGAGGCTGTGCAGCCACACCTCAAAAA...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCAGCTTCCCATTTGCTaGTGGGCCCTCCAACCTTCT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWQLPIC*WALQPS
Trigger: AGAAGGTTGGAGGGCCCAGCAGCAAATGGGAAGCTG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGAGGATTTTCTTGTCTaGCCGCTCCTTCGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGEDFLV*PLLRCQ
Trigger: CTGACAGCGAAGGAGCGGGCAGACAAGAAAATCCTC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCCAGAATCTTGCAGTTaGCAAAGCCCTCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSPESCS*QSPLQR
Trigger: TCTTTGGAGAGGGCTTTGGCAACTGCAAGATTCTGG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATACCAGAATCTTGCAGTTaGCAAAGCCCTCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: SHCWSGWKRVCLPVREFIPESCS*QSPLQR
Trigger: TCTTTGGAGAGGGCTTTGGCAACTGCAAGATTCTGG...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTAGGTACTCCTCACACTaGTTCTGGAACTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLRYSSH*FWNSAT
Trigger: GGTGGCTGAGTTCCAGAAGCAGTGTGAGGAGTACCT...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGGCATTGTCAGCCAGTaGCTGACACTTGATTTCCTC +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSGIVSQ*LTLDFL
Trigger: GAGGAAATCAAGTGTCAGGCACTGGCTGACAATGCC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCTCCTTATCGCCAATaGGCATCAACAGCCGACCAC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRPPYRQ*ASTADH
Trigger: GTGGTCGGCTGTTGATGCGCATTGGCGATAAGGAGG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAACCAGTGAGTCCTTCTaGTCCTCCAGCTCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATTSESF*SSSSGR
Trigger: GCGGCCTGAGCTGGAGGAGCAGAAGGACTCACTGGT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCCTCCAGCTTATTGCTaGGGTGGCTTTTGTCAATGC +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSPPAYC*GGFCQC
Trigger: GCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCATTCAGGTAGTCAATaGGGTCCTCCAGCTTATTGC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLHSGSQ*GPPAYC
Trigger: GCAATAAGCTGGAGGACCGCATTGACTACCTGAATG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAAGCTGCATGGGCTCTaGCTCCACCAAGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRKLHGL*LHQAGV
Trigger: AACTCCTGCTTGGTGGAGGCAGAGCCCATGCAGCTT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAATGAGGCAGACAAGCTaGATGGGCTCTGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITMRQTS*MGSAST
Trigger: GGTGGAGGCAGAGCCCATGCAGCTTGTCTGCCTCAT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGCCTCAGTCCTAGGTaGAACATCTGTCTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQGLSPR*NICLSS
Trigger: GGAGCTAAGACAGATGTTGCACCTAGGACTGAGGCC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGCAGAGAATGCAGCCTTaGAGGTCCTCCTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LVAEQRHHWFSQIVEWFLQRMQP*RSSLLE
Trigger: TTCCAGCAAGGAGGACCTGCAAGGCTGCATTCTCTG...CAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCTTTTCATTAGGCTaGAGCCTAACGGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSLFSLG*SLTAPV
Trigger: CACAGGTGCCGTTAGGCTGCAGCCTAATGAAAAGAG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTTGCTGGACATCGTaGAGGCAAAACCTGGGTCTA +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSLCWTS*RQNLGL
Trigger: TAGACCCAGGTTTTGCCTGCACGATGTCCAGCAAAG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTCTCAGCCTGCAGCTCTaGCTCACTGACAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFLSLQL*LTDSRG
Trigger: GCCCCGGCTGTCAGTGAGCCAGAGCTGCAGGCTGAG...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCAAAGTGTTCCAGAATaGCATCATGCTCCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLQSVPE*HHAPVS
Trigger: GGACACAGGAGCATGATGCCATTCTGGAACACTTTG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTATCTGCCGGGTCCAGTaGATCATGGAGGTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLIICRVQ*IMEVSS
Trigger: GCTAGAGACCTCCATGATCCACTGGACCCGGCAGAT...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGATCTGCCGGGTCCAGTaGATCATGGAGGTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWICRVQ*IMEVSS
Trigger: GCTAGAGACCTCCATGATCCACTGGACCCGGCAGAT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGTTATCTGTGGCCCCTaGGCACCAAAGAAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGVICGP*APKKQG
Trigger: TCCTTGCTTCTTTGGTGCCCAGGGGCCACAGATAAC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTCGGGAGGCAAGCCTGTaGAAGGTGTCCAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFREASL*KVSSRS
Trigger: GCTTCTGCTGGACACCTTCCACAGGCTTGCCTCCCG...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGTAGGGCTCCAGGTCTaGCCATTTCTTGTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQVGLQV*PFLVPF
Trigger: GAACGGAACAAGAAATGGCCAGACCTGGAGCCCTAC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGGTAGGGCTCCAGGTCTaGCCATTTCTTGTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: LVAEQRHHWFSQIVEWFLVGLQV*PFLVPF
Trigger: GAACGGAACAAGAAATGGCCAGACCTGGAGCCCTAC...CAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCCCGATGCTCTCTTTaGTCCTCTTCAAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSARCSL*SSSNSR
Trigger: CCTGGAATTTGAAGAGGACCAAAGAGAGCATCGGGC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCCAAAGTCTGCAGAGTaGGTGAGAATTCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSPKSAE*VRIPPV
Trigger: CACAGGTGGAATTCTCACCCACTCTGCAGACTTTGG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGGCAGAAGACAGAGATaGTGGAAAAGAGGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSGRRQR*WKRGGC
Trigger: GCAACCACCTCTTTTCCACCATCTCTGTCTTCTGCC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTATGCCGCTGCTGATTTaGGTCTGGATCTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSMPLLI*VWIFLM
Trigger: CATCAAGAAGATCCAGACCCAAATCAGCAGCGGCAT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCAAATTGCTCGTGTATaGGAGGGATCTGAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEQIARV*EGSESP
Trigger: TGGAGACTCAGATCCCTCCCATACACGAGCAATTTG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCCCAAATTGCTCGTGTATaGGAGGGATCTGAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LKILSGGSQCTRRRPRTSQIARV*EGSESP
Trigger: TGGAGACTCAGATCCCTCCCATACACGAGCAATTTG...GGATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATCCAGCAGAGTTTGTTaGAAGACAACCCACTCCCCG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQSSRVC*KTTHSP
Trigger: CGGGGAGTGGGTTGTCTTCCAACAAACTCTGCTGGA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGGTTCTGAAGGTCCTTaGAGGGTGGCTGCTCGATCT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWGSEGP*RVAARS
Trigger: AGATCGAGCAGCCACCCTCCAAGGACCTTCAGAACC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTATCTCCCAGATTTGCTaGAGGGCATCGAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLISQIC*RASSSF
Trigger: GAAGGAGCTCGATGCCCTCCAGCAAATCTGGGAGAT...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGGGCCGTGGTCTCCATaGTTTCCGTCTGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITGPWSP*FPSAGS
Trigger: TGATCCTGCAGACGGAAACCATGGAGACCACGGCCC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGACGAAACAGCCCGTaGGCCGTGGTCTCCATGGTT +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIRRNSP*AVVSMV
Trigger: AACCATGGAGACCACGGCCCACGGGCTGTTTCGTCG...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AAAGGGTGTGCTTGCCAGTCCGTGAATTCATACCTCTGGGTGCACAAACGAGGGTCACATCCCAGGTCTTaGCAATGTTTTGTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: KGCACQSVNSYLWVHKRGSHPRS*QCFVKP
Trigger: TGGCTTTACAAAACATTGCCAAGACCTGGGATGTGA...CCCTCGTTTGTGCACCCAGAGGTATGAATTCACGGACTGGCAAGCACACCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTAGACAGAGCTACCTaGTTATCTTCCAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSVDRAT*LSSSAW
Trigger: CCAGGCACTGGAAGATAACCAGGTAGCTCTGTCTAC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAAGGCAGCGTTCCCAGTaGTCCACATCCTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQRQRSQ*STSFSK
Trigger: CTTTGAGAAGGATGTGGACCACTGGGAACGCTGCCT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGATAAGGTCGATTCATTaGGCAGCTGCTTGCGGATGT +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEIRSIH*AAACGC
Trigger: ACATCCGCAAGCAGCTGCCCAATGAATCGACCTTAT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGCAGGTGCAATGCCGTaGTCAGTGTCATGTAACACC +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQAGAMP*SVSCNT
Trigger: GGTGTTACATGACACTGACCACGGCATTGCACCTGC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CCGGGCATGAATTTCTATCGTCACCAGAGCCACAATTTTAAGCCGCATGATCTTGCAGGTGCAATGCCGTaGTCAGTGTCATGTAACACC +
Preference number: 4 (lower is better)
Translates to: PGMNFYRHQSHNFKPHDLAGAMP*SVSCNT
Trigger: GGTGTTACATGACACTGACCACGGCATTGCACCTGC...AAGATCATGCGGCTTAAAATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCCCAAGCTCCAGTCTaGGCCAGACCTGAGTACATT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRPQAPV*ARPEYI
Trigger: AATGTACTCAGGTCTGGCCCAGACTGGAGCTTGGGG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGTGTGTACACCTTCTTaGCCAGAATCTTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEVCTPS*PESCSC
Trigger: GCAACTGCAAGATTCTGGCCAAGAAGGTGTACACAC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCAGGCAGCTCAATGTTaGGAAACAGATCTTGCACGA +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLQAAQC*ETDLAR
Trigger: TCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTCAGGCAGCTCAATGTTaGGAAACAGATCTTGCACGA +
Preference number: 4 (lower is better)
Translates to: TGSSMLGNRSCTMALNRGQAAQC*ETDLAR
Trigger: TCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTG...ACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGAACGCTCTGGGCGATaGAGGTCTTCCCAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATERSGR*RSSQSP
Trigger: TGGGGACTGGGAAGACCTCCATCGCCCAGAGCGTTC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAATATGCGGATGATCTaGGACTTTGTGGGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSENMRMI*DFVGKV
Trigger: GACCTTCCCCACAAAGTCCCAGATCATCCGCATATT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTAATATGCGGATGATCTaGGACTTTGTGGGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSNMRMI*DFVGKV
Trigger: GACCTTCCCCACAAAGTCCCAGATCATCCGCATATT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAGAGGTAATGCATCTTaGTGGGCGTGGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRRGNAS*WAWAGS
Trigger: GCTTCCTGCCCACGCCCACCAAGATGCATTACCTCT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCTCTAAGCATGCCCTaGAACACCTTGGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSALSMP*NTLEMS
Trigger: AGACATCTCCAAGGTGTTCCAGGGCATGCTTAGAGC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATGGTGTAGTCGCAGATaGATGAAGCCAGGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITWCSRR*MKPGGP
Trigger: TGGCCCGCCTGGCTTCATCCATCTGCGACTACACCA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCTGTCCGCAGTTTATTaGCTTGGGCCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWLSAVY*LGPAAP
Trigger: AGGAGCTGCTGGCCCAAGCCAATAAACTGCGGACAG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTCATTCGGATTCGCTTaGGCTCCACCACCCGATATA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSSFGFA*APPPDI
Trigger: TATATCGGGTGGTGGAGCCCAAGCGAATCCGAATGA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTTCCCGATCCAGATTTaGTTGACAATCTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSFPIQI*LTISSR
Trigger: CCGGGATGAGATTGTCAACCAAATCTGGATCGGGAA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTCCCGATCCAGATTTaGTTGACAATCTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEFPIQI*LTISSR
Trigger: CCGGGATGAGATTGTCAACCAAATCTGGATCGGGAA...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTCTCCGGGGCAGCATTaGTATACCACAGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWSPGQH*YTTGAS
Trigger: ACTGGCACCTGTGGTATACCAATGCTGCCCCGGAGA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAATAGGGAAGTCTGGGTaGGGGATGGAGCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITIGKSG*GMELSQ
Trigger: CTGGCTCAGCTCCATCCCCCACCCAGACTTCCCTAT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGATGACGATGAGACCCTaGATGCCTTTCTCTAGGTCT +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEMTMRP*MPFSRS
Trigger: AGACCTAGAGAAAGGCATCCAGGGTCTCATCGTCAT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCAGAGCGGAGGAACATaGGCATCAAAGATGCAATTG +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEQSGGT*ASKMQL
Trigger: CAATTGCATCTTTGATGCCCATGTTCCTCCGCTCTG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGACTGAAACGTTGTTTTaGCGAGCTGAAGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSETETLF*RAEDCS
Trigger: GCTGCAGTCTTCAGCTCGCCAAAACAACGTTTCAGT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCCAGACACCATCCTTaGGGGGATACACTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRPRHHP*GDTLGC
Trigger: GCAACCTAGTGTATCCCCCCAAGGATGGTGTCTGGG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAGGAGTACATGCCCTTaGCGCTCTTCTTGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRRSTCP*RSSCGS
Trigger: AGAGCCGCAAGAAGAGCGCCAAGGGCATGTACTCCT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTCCAGGGAGATGGCGTaGCAGCATAAGCGGATGATC +
Preference number: 4 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLISREMA*QHKRMI
Trigger: GATCATCCGCTTATGCTGCCACGCCATCTCCCTGGA...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACATTAGCTGAGCCATTATaGCCATCTAGTGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATLAEPL*PSSGRT
Trigger: TGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAA...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTTCTTCACTCTGTGCTTaGGGTCCCTCCAACCGTGGC +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFSSLCA*GPSNRG
Trigger: GCCACGGTTGGAGGGACCTCAAGCACAGAGTGAAGA...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATGCCTCGGGCTCCACTaGTTCTTCACTCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITCLGLH*FFTLCL
Trigger: CAAGCACAGAGTGAAGAATCAGTGGAGCCCGAGGCA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCTGGTGCTTGGCGAATaGAGTAGACAAGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLLVLGE*SRQAGS
Trigger: AGAACCAGCTTGTCTACTTCATTCGCCAAGCACCAG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACGAAGTTCTCCCAGGTaGTGGGAACTGGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATRSSPR*WELVLG
Trigger: GCCAAGCACCAGTTCCCATCACCTGGGAGAACTTCG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTGTGTTTGCAAAGATCTaGGGGGCAAAGACTCCACCG +
Preference number: 4 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLIVFAKI*GAKTPP
Trigger: CGGTGGAGTCTTTGCCCCTCAGATCTTTGCAAACAC...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp CTAGTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGTGTCCTTGGGCTTCATaGAAGCCAACTCCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: LVAEQRHHWFSQIVEWFLCPWAS*KPTPGK
Trigger: CTTACCAGGAGTTGGCTTTCATGAAGCCCAAGGACA...CAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCACTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGACTCGAAGGCTGAGGTaGTCAGGTTCTGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWTRRLR*SGSGSS
Trigger: TGATGACCCAGAACCTGATCACCTCAGCCTTCGAGT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACACCAACTCGAAGGCTaGGGTGATCAGGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITHQLEG*GDQVLG
Trigger: ACCCAGAACCTGATCACCTCAGCCTTCGAGTTGGTG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCCGCCTTCTCCTGGCTaGTTCGCAGCAATGGGGTAT +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIPPSPG*FAAMGY
Trigger: ATACCCCATTGCTGCGAATCAGCCAGGAGAAGGCGG...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGCCGAATACGCTCTTTaGATAGGGCCTGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWAEYAL*IGPAHL
Trigger: CAGATGAGCAGGCCCTATTCAAAGAGCGTATTCGGC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACAGCAGCCATCTCCCTaGGCAGAGTCGCGAACTTGT +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATQQPSP*AESRTC
Trigger: ACAAGTTCGCGACTCTGCTCAGGGAGATGGCTGCTG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTCTGCGGAGGGCGGCTaGTTTTCTCTGCGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQISAEGG*FSLRSP
Trigger: AGGAGAACGCAGAGAAAATCAGCCGCCCTCCGCAGA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATGTATGGGAGGGATCTaGGTCTCCACGTTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITCMGGI*VSTLAK
Trigger: CTTGGCCAACGTGGAGACTCAGATCCCTCCCATACA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GCAGTTGCCAAAGCCCTCTCCAAAGAGAATGATTTCTGCAATGAGGGTGGAGTCTATGTGCTTTCTTCTTaGAGTCATCTGCCGAGTGGA +
Preference number: 4 (lower is better)
Translates to: AVAKALSKENDFCNEGGVYVLSS*SHLPSG
Trigger: TCCACTCGGCAGATGACTTCAAGAAGAAAGCACATA...GACTCCACCCTCATTGCAGAAATCATTCTCTTTGGAGAGGGCTTTGGCAACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ACCCCTCTTTATTTCCAGACCCCTCTTAGGTACGTGCATTTGTCCCTTCTCTCAATTTTCTCCACATGCTaGTCCATCCCAAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: TPLYFQTPLRYVHLSLLSIFSTC*SIPSST
Trigger: TGTGGAGCTTGGGATGGATCAGCATGTGGAGAAAAT...TGAGAGAAGGGACAAATGCACGTACCTAAGAGGGGTCTGGAAATAAAGAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCAGCTCTTTAGTTGCTaGAGCAGAGATCTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSQLFSC*SRDLPN
Trigger: ATTGGGGAGATCTCTGCTTCAGCAACTAAAGAGCTG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TCTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCCTTTCCAGTTGCTGTTaGCCTGGTCAAATAAGGTCG +
Preference number: 4 (lower is better)
Translates to: SKNTEWRKSMYSPSPENILSSCC*PGQIRS
Trigger: CGACCTTATTTGACCAGGTCAACAGCAACTGGAAAG...GATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTGTTCATCCTGTCCATaGTGGCTTTCCAGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSCSSCP*WLSSCC
Trigger: ACAGCAACTGGAAAGCCATCATGGACAGGATGAACA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACCCCTCTTTATTTCCAGACCCCTCTTAGGTACGTGCATTTGTCCCTTCTCTCAAACACATCCCGGGCATaGATTTCTATCGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: TPLYFQTPLRYVHLSLLSNTSRA*ISIVTR
Trigger: TCTGGTGACGATAGAAATTCATGCCCGGGATGTGTT...TGAGAGAAGGGACAAATGCACGTACCTAAGAGGGGTCTGGAAATAAAGAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGTTCATATCTCTCATTaGGAGCAGCAGAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLVHISH*EQQNLF
Trigger: GAAGAGGTTCTGCTGCTCTCAATGAGAGATATGAAC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCAGGGGTGCATCAACTaGAGTGAGCTTGGCGATGTT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRQGCIN*SELGDV
Trigger: AACATCGCCAAGCTCACTTCAGTTGATGCACCCCTG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TCTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCCCTTGTTATCGTCCATaGCGGAGTTCATGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: SKNTEWRKSMYSPSPENIPCYRP*RSSCSR
Trigger: TCGAGAACATGAACTCCGTCATGGACGATAACAAGG...GATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACCCTGCTCTCAATaGTGCTCTGCACGTTATTGG +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGQPCSQ*CSARYW
Trigger: CCAATAACGTGCAGAGCATCATTGAGAGCAGGGTTG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCCTGAAGCTTCTGATTaGTCATGGTGCCGAATATGC +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSPEASD*SWCRIC
Trigger: GCATATTCGGCACCATGATCAATCAGAAGCTTCAGG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAGATGATGAAATGTaGGGTCAAAGAAGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLRDDEM*GQRRSR
Trigger: TCGGCTCCTTCTTTGACCTCACATTTCATCATCTCT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATCCGATAATGTTTGGTaGCCTCGATCTGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQSDNVW*PRSGRW
Trigger: CCACCTTCCAGATCGAGGTCACCAAACATTATCGGA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGATTGGGCACCTCGCCTaGGCTGAGGATGTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWIGHLA*AEDVVD
Trigger: ATCAACAACATCCTCAGCTCAGGCGAGGTGCCCAAT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGATCTTCTGGGAATACTaGGCTACTGACCAGTGCATA +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEIFWEY*ATDQCI
Trigger: TATGCACTGGTCAGTAGCTCAGTATTCCCAGAAGAT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTATCTTCTGGGAATACTaGGCTACTGACCAGTGCATA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSIFWEY*ATDQCI
Trigger: TATGCACTGGTCAGTAGCTCAGTATTCCCAGAAGAT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTATTTGGTGGGTGTaGCATAGTTGTGTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQGIWWV*HSCVSA
Trigger: TGCGGAGACACAACTATGTCACACCCACCAAATACC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTCATCTGCAGGTCGATaGTCTTCAGGCCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQISSAGR*SSGPGL
Trigger: GAGGCCAGGGCCTGAAGATCATCGACCTGCAGATGA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGGGCTACAGATTTGTTaGGCATGGGGTTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWGLQIC*AWGSVW
Trigger: CCACACTGAACCCCATGCTCAACAAATCTGTAGCCC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGGGCTACAGATTTGTTaGGCATGGGGTTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRGLQIC*AWGSVW
Trigger: CCACACTGAACCCCATGCTCAACAAATCTGTAGCCC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATCACCTCTGTGGCTGTaGTCTTGGAGGTATGCAGCG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITSPLWL*SWRYAA
Trigger: CGCTGCATACCTCCAAGATCACAGCCACAGAGGTGA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGCGCCAAGTCAGTGTTaGTCTCTGTGGTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITAPSQC*SLWSHW
Trigger: CCAGTGAGACCACAGAGATCAACACTGACTTGGCGC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTGGGGATCGTGGGGTTaGATCCTCCAGCACCGACTT +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIWGSWG*ILQHRL
Trigger: AAGTCGGTGCTGGAGGATTCAACCCCACGATCCCCA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGGAAAACTGTGGTTCTaGCATCAGTTGGTAAAGACG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLGKLWF*HQLVKT
Trigger: CGTCTTTACCAACTGATGTCAGAACCACAGTTTTCC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGGGTTTGTGCCTCAGTaGTCTGAGAGGCCACATCAG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITGFVPQ*SERPHQ
Trigger: CTGATGTGGCCTCTCAGATCACTGAGGCACAAACCC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCTGGTGGGTGTAATCTaGGGTTGCAAGGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSLVGVI*GCKESK
Trigger: TTTGCTTTCCTTGCAACCTCAGATTACACCCACCAG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGCAGGTCAATGCCGATaGCAAAGGAGGCTCGGTCTG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATAGQCR*QRRLGL
Trigger: CAGACCGAGCCTCCTTTGTCATCGGCATTGACCTGC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTAGCTGTCCAGGCTCATaGGTAGAGCAGTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQISCPGS*VEQCPS
Trigger: AGAGGGGCACTGCTCTACTCATGAGCCTGGACAGCT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGTGTACTTGTCAAAGTTaGCATCCAGCATGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: LVAEQRHHWFSQIVEWFLCTCQS*HPACPP
Trigger: AGGCGGGCATGCTGGATGTCAACTTTGACAAGTACA...CAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCACTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGCAAAGATGCTGGTCTaGTCTAGGACCCAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFAKMLV*SRTQPR
Trigger: TCGGGGCTGGGTCCTAGATCAGACCAGCATCTTTGC...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTATCGCTTTGAAGTCCTaGGGGGCAGGAACACTGTTT +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLIALKS*GAGTLF
Trigger: AAACAGTGTTCCTGCCCCTCAGGACTTCAAAGCGAT...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTTTGGGGAGCTCAGCCTaGAGCTCTGGCTCACTGACA +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFLGSSA*SSGSLT
Trigger: TGTCAGTGAGCCAGAGCTGCAGGCTGAGCTCCCCAA...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCTCCTGTGTCCACACTaGATCCGCCAGTCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQILLCPH*IRQSCQ
Trigger: CTGACAGGACTGGCGGATGCAGTGTGGACACAGGAG...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACTCCTGTGTCCACACTaGATCCGCCAGTCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATLLCPH*IRQSCQ
Trigger: CTGACAGGACTGGCGGATGCAGTGTGGACACAGGAG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGGGTCTGTACAGGCATaGCCAGCTCTAGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIGSVQA*PALASA
Trigger: GGCTGAAGCTAGAGCTGGGCATGCCTGTACAGACCC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTCCCAAACTGCACAGTTaGCTCGAAGTTCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLIPKLHS*LEVLPG
Trigger: ACCTGGGAGAACTTCGAGGCAACTGTGCAGTTTGGG...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTGGTCCATGCATCGGTTaGGCCAGAACTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLIGPCIG*ARTQSP
Trigger: AGGAGATTGAGTTCTGGCGCAACCGATGCATGGACC...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTGACGACTTGGCAAGGTaGAGGATGGATTCAACGTGC +
Preference number: 4 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLIDDLAR*RMDSTC
Trigger: GCACGTTGAATCCATCCTGCACCTTGCCAAGTCGTC...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCATCCTGGATCTGCTGTaGCAGTTTCATAAAGGGCGC +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGILDLL*QFHKGR
Trigger: GCGCCCTTTATGAAACTGGCACAGCAGATCCAGGAT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATCCTGGATCTGCTGTaGCAGTTTCATAAAGGGCGC +
Preference number: 4 (lower is better)
Translates to: LVAEQRHHWFSQIVEWFLILDLL*QFHKGR
Trigger: GCGCCCTTTATGAAACTGGCACAGCAGATCCAGGAT...CAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCACTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATCTTTGAATAGGGCCTaGTCATCTGGGGACAGCATG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQSLNRA*SSGDSM
Trigger: CATGCTGTCCCCAGATGAGCAGGCCCTATTCAAAGA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTAGGTTCATCAATTTCTaGTGTACAGCTGCCCGATGC +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSRFINF*CTAARC
Trigger: GCATCGGGCAGCTGTACAGCAGAAATTGATGAACCT...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTACACCTGCCAAAGTCTaGAGAGTGGGTGAGAATTCC +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLTPAKV*RVGENS
Trigger: GGAATTCTCACCCACTCTGCAGACTTTGGCAGGTGT...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAGGGAGAACTTGAGGTaGGAACAGTCCAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRRENLR*EQSSST
Trigger: TGTGCTGCTGGACTGTTCGCACCTCAAGTTCTCCCT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCATTCATTGCAGTGCTaGACCAGGGAGAACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGHSLQC*TRENLR
Trigger: CCTCAAGTTCTCCCTGGTGCAGCACTGCAATGAATG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGTCGCGAACTTGTTCTaGCATTCATTGCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGVANLF*HSLQCC
Trigger: GCAGCACTGCAATGAATGGCAGAACAAGTTCGCGAC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCAAGAATGGCAAATTaGTCGTGTATGGGAGGGATC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSESRMAN*SCMGGI
Trigger: GATCCCTCCCATACACGAGCAATTTGCCATTCTTGA...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACTTCTTGAAGTCATCTaGCGAGTGGATCAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQLLEVI*RVDQAC
Trigger: ACAGGCCTGATCCACTCGGCAGATGACTTCAAGAAG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGCGATCTCCCAGATTTaGTGGAGGGCATCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATAISQI*WRASSS
Trigger: GGAGCTCGATGCCCTCCAGCAAATCTGGGAGATCGC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCCAAGCTCCACAATCTaGTCCAAGGTGAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSPSSTI*SKVKLS
Trigger: TGAAAGCTTCACCTTGGAGCAGATTGTGGAGCTTGG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAGCTTCCCATTTGCTaGTGGGCCCTCCAACCTTCT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITQLPIC*WALQPS
Trigger: AGAAGGTTGGAGGGCCCAGCAGCAAATGGGAAGCTG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAATGTCTCGAATCTCCTaGTCAACGGTCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITMSRIS*STVSRS
Trigger: GCTGCGGGAGACCGTTGAGCAGGAGATTCGAGACAT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGGGAGGCCTGTAGAATaGGCCATGAGGCAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATGRPVE*AMRQSC
Trigger: GCAAGACTGCCTCATGGCGCATTCTACAGGCCTCCC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCTCTCAATGATGCTCTaGACGTTATTGGATGTGGTC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSELSMML*TLLDVV
Trigger: GACCACATCCAATAACGTGCAGAGCATCATTGAGAG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGAAGGCTTCTGTGTCTaGCGCATCAACCAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIEGFCV*RINQPV
Trigger: GACCGGCTGGTTGATGCGGCAGACACAGAAGCCTTC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACGGAAGAGCACTAGCTaGATGGGCACGACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATRKSTS*MGTTEG
Trigger: ACCCTCTGTCGTGCCCATGCAGCTAGTGCTCTTCCG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGCCTCCCGCTTCTGCTaGACAATGATGACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITASRFC*TMMTRY
Trigger: GTACCTGGTCATCATTGTGCAGCAGAAGCGGGAGGC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGTTACGGCCTTCTGCTaGTCATCTGCCTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIVTAFC*SSASRF
Trigger: GAAGCGGGAGGCAGATGAGCAGCAGAAGGCCGTAAC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTTGGTATACCACAGGTaGCAGTCACGAGGGTACTGC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRLVYHR*QSRGYC
Trigger: GCAGTACCCTCGTGACTGGCACCTGTGGTATACCAA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGCCCACAGCTCAAACTaGTCCACACGCATGGCCAAG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATAHSSN*STRMAK
Trigger: CTTGGCCATGCGTGTGGAGCAGTTTGAGCTGTGGGC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGCCCACAGCTCAAACTaGTCCACACGCATGGCCAAG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIAHSSN*STRMAK
Trigger: CTTGGCCATGCGTGTGGAGCAGTTTGAGCTGTGGGC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGGGGATACACTAGGTTaGTGTCATCCACAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSGDTLG*CHPQWK
Trigger: TTTCCACTGTGGATGACAGCAACCTAGTGTATCCCC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCTTCTTGCGGCTCTCTaGAGGCCGGAAGTGGATCGT +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQILLAAL*RPEVDR
Trigger: ACGATCCACTTCCGGCCTGCAGAGAGCCGCAAGAAG...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTAGGGGCAGGAGTACATaGCCTTGGCGCTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIRGRST*PWRSSC
Trigger: GCAAGAAGAGCGCCAAGGGCATGTACTCCTGCCCCT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGGCCTCAGTCCTAGGTaGAACATCTGTCTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRGLSPR*NICLSS
Trigger: GGAGCTAAGACAGATGTTGCACCTAGGACTGAGGCC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCAAGCTGCGCTTTCCTaGCTCAAACTAGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWQAALS*LKLEPE
Trigger: CTCAGGCTCTAGTTTGAGGCAGGAAAGCGCAGCTTG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGATTCTGTAGGGTCCTaGGCAAAGTGTTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSDSVGS*AKCSRM
Trigger: CATTCTGGAACACTTTGCCCAGGACCCTACAGAATC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAGGCTTCATGTTCATaGCCTCTGCAGGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGQASCS*PLQGCR
Trigger: TCTACATCCCTGCAGAGGCCATGAACATGAAGCCTG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATGGCAAGGTGCAGGATaGATTCAACGTGCTTCACTC +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQWQGAG*IQRASL
Trigger: GAGTGAAGCACGTTGAATCCATCCTGCACCTTGCCA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGGAACCAGCTCATCAATaGCCTGGACCATCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: LVAEQRHHWFSQIVEWFLEPAHQ*PGPSAD
Trigger: ATCAGCAGATGGTCCAGGCCATTGATGAGCTGGTTC...CAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCACTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTGCTGATTCGCAGCAATaGGGTATCCAACCGCCGAAT +
Preference number: 4 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLIADSQQ*GIQPPN
Trigger: ATTCGGCGGTTGGATACCCCATTGCTGCGAATCAGC...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGCTGATTCGCAGCAATaGGGTATCCAACCGCCGAAT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWADSQQ*GIQPPN
Trigger: ATTCGGCGGTTGGATACCCCATTGCTGCGAATCAGC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTCTTGAGTCCCGGGTaGATCTTCTTATCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLFLSPG*IFLSRS
Trigger: GCTCCTGGATAAGAAGATCCACCCGGGACTCAAGAA...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTGCCCGATGCTCTCTTTaGTCCTCTTCAAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLARCSL*SSSNSR
Trigger: CCTGGAATTTGAAGAGGACCAAAGAGAGCATCGGGC...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGATGGTCACCACATCCTaGTGCAGGTTCATCAATTTC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEMVTTS*CRFINF
Trigger: GAAATTGATGAACCTGCACCAGGATGTGGTGACCAT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACCAAAGTCTGCAGAGTaGGTGAGAATTCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQPKSAE*VRIPPV
Trigger: CACAGGTGGAATTCTCACCCACTCTGCAGACTTTGG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTATGGTGGAAAAGAGGTaGTTGCCAATGTCATTGACC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSMVEKR*LPMSLT
Trigger: GGTCAATGACATTGGCAACCACCTCTTTTCCACCAT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAAGACAGAGATGGTaGAAAAGAGGTGGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLRRQRW*KRGGCQ
Trigger: TTGGCAACCACCTCTTTTCCACCATCTCTGTCTTCT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCTGCTGATTTGGGTCTaGATCTTCTTGATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSLLIWV*IFLMSS
Trigger: TGAGGACATCAAGAAGATCCAGACCCAAATCAGCAG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATCTGAGTCTCCACGTTaGCCAAGTCGTGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITSESPR*PSRASG
Trigger: CCCTGAAGCACGACTTGGCCAACGTGGAGACTCAGA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTGACACTGTCCTCGACTaGCACCTCGTACTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLDTVLD*HLVLFK
Trigger: CTTGAAAAGTACGAGGTGCCAGTCGAGGACAGTGTC...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp AAAGGGTGTGCTTGCCAGTCCGTGAATTCATACCTCTGGGTGCACAAACGAGGGTTATCTTCCAGTGCCTaGAATACTTCTTCTGTACCT +
Preference number: 4 (lower is better)
Translates to: KGCACQSVNSYLWVHKRGLSSSA*NTSSVP
Trigger: AGGTACAGAAGAAGTATTCCAGGCACTGGAAGATAA...CCCTCGTTTGTGCACCCAGAGGTATGAATTCACGGACTGGCAAGCACACCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGTAGACAGAGCTACCTaGTTATCTTCCAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGVDRAT*LSSSAW
Trigger: CCAGGCACTGGAAGATAACCAGGTAGCTCTGTCTAC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTAATTGCGTGTTGGTCTaGCGGATGACACAGTCATCA +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSNCVLV*RMTQSS
Trigger: TGATGACTGTGTCATCCGCCAGACCAACACGCAATT...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTAATTGCGTGTTGGTCTaGCGGATGACACAGTCATCA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSNCVLV*RMTQSS
Trigger: TGATGACTGTGTCATCCGCCAGACCAACACGCAATT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACCCCTCTTTATTTCCAGACCCCTCTTAGGTACGTGCATTTGTCCCTTCTCTCAAATTGCGTGTTGGTCTaGCGGATGACACAGTCATCA +
Preference number: 4 (lower is better)
Translates to: TPLYFQTPLRYVHLSLLSNCVLV*RMTQSS
Trigger: TGATGACTGTGTCATCCGCCAGACCAACACGCAATT...TGAGAGAAGGGACAAATGCACGTACCTAAGAGGGGTCTGGAAATAAAGAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGCAGGTGCAATGCCGTaGTCAGTGTCATGTAACACC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRAGAMP*SVSCNT
Trigger: GGTGTTACATGACACTGACCACGGCATTGCACCTGC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTAGGATGCACAGGATCTaGTGGGCCACCACTGACAGC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIRMHRI*WATTDS
Trigger: GCTGTCAGTGGTGGCCCACCAGATCCTGTGCATCCT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTCAAAGCCATCAAAATaGAAATGGGTGAGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSSKPSK*KWVRPA
Trigger: TGCCGGCCTCACCCATTTCCATTTTGATGGCTTTGA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TCTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCTCAAAGCCATCAAAATaGAAATGGGTGAGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: SKNTEWRKSMYSPSPENISKPSK*KWVRPA
Trigger: TGCCGGCCTCACCCATTTCCATTTTGATGGCTTTGA...GATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCACCACCATGGCAATTaGGCGGAACATGGATTTAAG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSHHHGN*AEHGFK
Trigger: CTTAAATCCATGTTCCGCCCAATTGCCATGGTGGTG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTGTGTACACCTTCTTaGCCAGAATCTTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSVCTPS*PESCSC
Trigger: GCAACTGCAAGATTCTGGCCAAGAAGGTGTACACAC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CCGGGCATGAATTTCTATCGTCACCAGAGCCACAATTTTAAGCCGCATGATCTTACGATCATGGTGGAGTaGCGGGAGTTCTTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: PGMNFYRHQSHNFKPHDLTIMVE*REFLVS
Trigger: TGAAACCAAGAACTCCCGCCACTCCACCATGATCGT...AAGATCATGCGGCTTAAAATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTAGCCCACGATCATGGTaGAGTGGCGGGAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQISPRSW*SGGSSW
Trigger: CCAAGAACTCCCGCCACTCCACCATGATCGTGGGCT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTGCAGCCCACGATCATaGTGGAGTGGCGGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQICSPRS*WSGGSS
Trigger: AGAACTCCCGCCACTCCACCATGATCGTGGGCTGCA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGAATGGGATTCTGGTTaGCCACCAAGCTGCTCACCA +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIREWDSG*PPSCSP
Trigger: TGGTGAGCAGCTTGGTGGCCAACCAGAATCCCATTC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGACCCACCAGCAGAATaGGATTCTGGTTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITDPPAE*DSGWPP
Trigger: TGGTGGCCAACCAGAATCCCATTCTGCTGGTGGGTC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGACTGCAGAACGCTCTaGGCGATGGAGGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIDCRTL*AMEVFP
Trigger: TGGGAAGACCTCCATCGCCCAGAGCGTTCTGCAGTC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATGCTCTGCACGTTATTaGATGTGGTCTGTGCGGACA +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQCSARY*MWSVRT
Trigger: TGTCCGCACAGACCACATCCAATAACGTGCAGAGCA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGATCAGCTCCAGGGGTaGCTGGGACCCAAACATGTC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATDQLQG*LGPKHV
Trigger: GACATGTTTGGGTCCCAGCCACCCCTGGAGCTGATC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGCTCTAAGCATGCCCTaGAACACCTTGGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGALSMP*NTLEMS
Trigger: AGACATCTCCAAGGTGTTCCAGGGCATGCTTAGAGC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTGGTCTTCATACACCTTaGGCTCCTTCAGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLGLHTP*APSGNP
Trigger: GGGATTTCCTGAAGGAGCCCAAGGTGTATGAAGACC...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTATAGTGACAAAGATCTaGGCCACCTTCCTGTGGATA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSIVTKI*ATFLWI
Trigger: TATCCACAGGAAGGTGGCCCAGATCTTTGTCACTAT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACGCAGTTTATTGGCTTaGGCCAGCAGCTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATRSLLA*ASSSCR
Trigger: ACGGCAGGAGCTGCTGGCCCAAGCCAATAAACTGCG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCAATCTTTTCACTGTTaGCTGTTACGGCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSQSFHC*LLRPSA
Trigger: AGCAGAAGGCCGTAACAGCCAACAGTGAAAAGATTG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTATCTCCACTTGGGCTaGGGGCCGTCCATAAGACTT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRYLHLG*GPSIRL
Trigger: AAGTCTTATGGACGGCCCCCAGCCCAAGTGGAGATA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTCTCATCCCGGTAGTTaGTCAGGAAGGGTCCCATGT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWSHPGS*SGRVPC
Trigger: ACATGGGACCCTTCCTGACCAACTACCGGGATGAGA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGGTATCCAAAGTGAATaGCGTGTTCTAGGATTCGCA +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLGIQSE*RVLGFA
Trigger: TGCGAATCCTAGAACACGCCATTCACTTTGGATACC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGCATGGGGTTCAGTGTaGGGTCCAGATATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWAWGSV*GPDIPA
Trigger: TGCAGGAATATCTGGACCCCACACTGAACCCCATGC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGCATCCAGTGAGAACTaGTACATGGGGTCGATGCAG +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWASSEN*YMGSMQ
Trigger: CTGCATCGACCCCATGTACCAGTTCTCACTGGATGC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCTGAATAGTAGTTTGTaGCGTTCGAAAAGGGTACGG +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSELNSSL*RSKRVR
Trigger: CCGTACCCTTTTCGAACGCCACAAACTACTATTCAG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATCTCCGGGGCAGCATTaGTATACCACAGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITSPGQH*YTTGAS
Trigger: ACTGGCACCTGTGGTATACCAATGCTGCCCCGGAGA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAATTTTCCCACTCACCTaGCAGCATCGCCTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITIFPLT*QHRLLR
Trigger: CCGGAGAAGGCGATGCTGCCAGGTGAGTGGGAAAAT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTATGACGATGAGACCCTaGATGCCTTTCTCTAGGTCT +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSMTMRP*MPFSRS
Trigger: AGACCTAGAGAAAGGCATCCAGGGTCTCATCGTCAT...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCAGAGCGGAGGAACATaGGCATCAAAGATGCAATTG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSQSGGT*ASKMQL
Trigger: CAATTGCATCTTTGATGCCCATGTTCCTCCGCTCTG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTAGCTGCCTGCCCGGTTaGGATAGTAATAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQISCLPG*DSNSRG
Trigger: GCCCCTGCTATTACTATCCCAACCGGGCAGGCAGCT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACTCAGAAAGGTAGGATaGCAGGAAGCGGGGATCTCG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITLRKVG*QEAGIS
Trigger: CGAGATCCCCGCTTCCTGCCATCCTACCTTTCTGAG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGTGTTTGCAAAGATCTaGGGGGCAAAGACTCCACCG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITVFAKI*GAKTPP
Trigger: CGGTGGAGTCTTTGCCCCTCAGATCTTTGCAAACAC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTGTCCTTGGGCTTCATaGAAGCCAACTCCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRCPWAS*KPTPGK
Trigger: CTTACCAGGAGTTGGCTTTCATGAAGCCCAAGGACA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTCACCAACTCGAAGGCTaGGGTGATCAGGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFHQLEG*GDQVLG
Trigger: ACCCAGAACCTGATCACCTCAGCCTTCGAGTTGGTG...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAATCCTTGTCCAGACTTaGTGTCCACTCTTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQILVQT*CPLLEG
Trigger: ACCTTCCAAGAGTGGACATCAAGTCTGGACAAGGAT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGGTTGCCAATGTCATTaGCCACACCTGCCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWGCQCH*PHLPKS
Trigger: AGACTTTGGCAGGTGTGGTCAATGACATTGGCAACC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGGGTCTGGATCTTCTTaGTGTCCTCATCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWGSGSS*CPHLAP
Trigger: TGGAGCAAGATGAGGACATCAAGAAGATCCAGACCC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AAAGGGTGTGCTTGCCAGTCCGTGAATTCATACCTCTGGGTGCACAAACGAGGGGAACTGCTCTATTTTTaGGCGAGTGGTTTCAATAAT +
Preference number: 4 (lower is better)
Translates to: KGCACQSVNSYLWVHKRGELLYF*ASGFNN
Trigger: ATTATTGAAACCACTCGCTCAAAAATAGAGCAGTTC...CCCTCGTTTGTGCACCCAGAGGTATGAATTCACGGACTGGCAAGCACACCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCAAGCTTTCAGATTCCTaGTCAAACTCCCGCTGGATC +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGKLSDS*SNSRWI
Trigger: GATCCAGCGGGAGTTTGATCAGGAATCTGAAAGCTT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACCCCTCTTTATTTCCAGACCCCTCTTAGGTACGTGCATTTGTCCCTTCTCTCACAATCTGCTCCAAGGTaGAGCTTTCAGATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: TPLYFQTPLRYVHLSLLSQSAPR*SFQIPD
Trigger: ATCAGGAATCTGAAAGCTTCACCTTGGAGCAGATTG...TGAGAGAAGGGACAAATGCACGTACCTAAGAGGGGTCTGGAAATAAAGAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCTTTCCAGTTGCTGTTaGCCTGGTCAAATAAGGTCG +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGLSSCC*PGQIRS
Trigger: CGACCTTATTTGACCAGGTCAACAGCAACTGGAAAG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TCTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCGTTCATATCTCTCATTaGGAGCAGCAGAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: SKNTEWRKSMYSPSPENIVHISH*EQQNLF
Trigger: GAAGAGGTTCTGCTGCTCTCAATGAGAGATATGAAC...GATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGCTTGCCATAGTCAATaGCAGGCAGCTCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRACHSQ*QAAQCW
Trigger: CCAACATTGAGCTGCCTGTCATTGACTATGGCAAGC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCACATGCCGTCCGCATaGCACTGGACAAGATGCCAT +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIHMPSA*HWTRCH
Trigger: ATGGCATCTTGTCCAGTGTCATGCGGACGGCATGTG...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCCTTGTTATCGTCCATaGCGGAGTTCATGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGPCYRP*RSSCSR
Trigger: TCGAGAACATGAACTCCGTCATGGACGATAACAAGG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTTTTCGAACATGCGTTaGAGGGGCTCCACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIFSNMR*RGSTSA
Trigger: GGCTGAGGTGGAGCCCCTTCAACGCATGTTCGAAAA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGAGCTTGTCCTCAAATaGTGTCCAACTCCGTATTTT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLELVLK*CPTPYF
Trigger: AAAATACGGAGTTGGACATCATTTGAGGACAAGCTC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCTGTGCGGACATGTTaGCAACGAGCACCGACCACT +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATSVRTC*QRAPTT
Trigger: AGTGGTCGGTGCTCGTTGTCAACATGTCCGCACAGA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCAACCCTGCTCTCAATaGTGCTCTGCACGTTATTGG +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWQPCSQ*CSARYW
Trigger: CCAATAACGTGCAGAGCATCATTGAGAGCAGGGTTG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTTTCTCGAATGTACTTaGTGGTCTGCTTCGTACGGT +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSFLECT*WSASYG
Trigger: ACCGTACGAAGCAGACCATCAAGTACATTCGAGAAA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTAGAGATGATGAAATGTaGGGTCAAAGAAGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSRDDEM*GQRRSR
Trigger: TCGGCTCCTTCTTTGACCTCACATTTCATCATCTCT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGCACTGTCAGATCCGTaGGGTCTTCATACACCTTGG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITALSDP*GLHTPW
Trigger: CCAAGGTGTATGAAGACCTCACGGATCTGACAGTGC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAACTCTGAGAACCAGTTaGTGGTTGTGCAGTTCACCA +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQTLRTS*WLCSSP
Trigger: TGGTGAACTGCACAACCATCAACTGGTTCTCAGAGT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTGTGGATATTCTCCTaGGTTCCCAGGTCTACTCCT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRLWIFS*VPRSTP
Trigger: AGGAGTAGACCTGGGAACTCAGGAGAATATCCACAG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTTGTCAGCCAGTGCCTaGCACTTGATTTCCTCAACT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGLSASA*HLISST
Trigger: AGTTGAGGAAATCAAGTGTCAGGCACTGGCTGACAA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCGATCCAGATTTGGTTaGCAATCTCATCCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGRSRFG*QSHPGS
Trigger: ACTACCGGGATGAGATTGTCAACCAAATCTGGATCG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATGCAGCCCATATCATTaGGCACGAAGAACAGGATTG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQCSPYH*ARRTGL
Trigger: CAATCCTGTTCTTCGTGCTCAATGATATGGGCTGCA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGCTCAAAGGAGTTCATaGGTCCGTGGAAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWAQRSS*VRGSWS
Trigger: TGACCAACTTCCACGGACTCATGAACTCCTTTGAGC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGGAAAACTGTGGTTCTaGCATCAGTTGGTAAAGACG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSGKLWF*HQLVKT
Trigger: CGTCTTTACCAACTGATGTCAGAACCACAGTTTTCC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTGCCAGGCAATAAGCTaGTGTATTCCTTGTAAGAAG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSCQAIS*CIPCKK
Trigger: CTTCTTACAAGGAATACATCAGCTTATTGCCTGGCA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAGCCAGTGGGAAAGGTaGAACCAGACAACCAGAAGA +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRSQWER*NQTTRR
Trigger: TCTTCTGGTTGTCTGGTTTCACCTTTCCCACTGGCT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGTTGTTTTGGCGAGCTaGAGACTGCAGCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITVVLAS*RLQHSS
Trigger: ACTGCTGTGCTGCAGTCTTCAGCTCGCCAAAACAAC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGAGCAGTGCCCCTCTTaGTCCAATGATCAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITEQCPS*SNDQVS
Trigger: TGACACCTGATCATTGGATCAAGAGGGGCACTGCTC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGGTGTTTTACAGCACTaGGCTCCAATACAACTCTTT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLGVLQH*APIQLF
Trigger: AAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGGGCAGCATAAGCGGATaGTCTCATTGCTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: LVAEQRHHWFSQIVEWFLGSISG*SHCSSF
Trigger: GAAAGATGAGCAATGAGATCATCCGCTTATGCTGCC...CAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCACTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTGGCTGCCACAGGCATTaGTCTCAGGTTATGAATTTC +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLGCHRH*SQVMNF
Trigger: GAAATTCATAACCTGAGATCAATGCCTGTGGCAGCC...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGCTTCTTCTCAGCTTTaGTGGACATCGTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRASSQL*WTSCRQ
Trigger: TTGCCTGCACGATGTCCAGCAAAGCTGAGAAGAAGC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTCCAGAATGGCATCATaGTCCTGTGTCCACACTGCA +
Preference number: 4 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLISRMAS*SCVHTA
Trigger: TGCAGTGTGGACACAGGAGCATGATGCCATTCTGGA...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTGAGGTCTCTAGCCGTTaGACCAGCTCTTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLIEVSSR*TSSLSF
Trigger: AAAGGACAAAGAGCTGGTGCAACGGCTAGAGACCTC...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGAGGTCTCTAGCCGTTaGACCAGCTCTTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWEVSSR*TSSLSF
Trigger: AAAGGACAAAGAGCTGGTGCAACGGCTAGAGACCTC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGACGACTTGGCAAGGTaGAGGATGGATTCAACGTGC +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITDDLAR*RMDSTC
Trigger: GCACGTTGAATCCATCCTGCACCTTGCCAAGTCGTC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTCTTTGAATAGGGCCTaGTCATCTGGGGACAGCATG +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWSLNRA*SSGDSM
Trigger: CATGCTGTCCCCAGATGAGCAGGCCCTATTCAAAGA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTAGGTTCATCAATTTCTaGTGTACAGCTGCCCGATGC +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLRFINF*CTAARC
Trigger: GCATCGGGCAGCTGTACAGCAGAAATTGATGAACCT...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTGCCATTCATTGCAGTaGTGCACCAGGGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWCHSLQ*CTRENL
Trigger: CAAGTTCTCCCTGGTGCAGCACTGCAATGAATGGCA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTAGTTCCTCCAGTGTCTaGGGAGGGCGGCTGATTTTC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQISSSSV*GGRLIF
Trigger: GAAAATCAGCCGCCCTCCGCAGACACTGGAGGAACT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTCAAGAATGGCAAATTaGTCGTGTATGGGAGGGATC +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSSRMAN*SCMGGI
Trigger: GATCCCTCCCATACACGAGCAATTTGCCATTCTTGA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TCTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCTCAAGAATGGCAAATTaGTCGTGTATGGGAGGGATC +
Preference number: 4 (lower is better)
Translates to: SKNTEWRKSMYSPSPENISRMAN*SCMGGI
Trigger: GATCCCTCCCATACACGAGCAATTTGCCATTCTTGA...GATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCCTTGGAGGGTGGCTaGTCGATCTTGAAGATGCCC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATSLEGG*SILKMP
Trigger: GGGCATCTTCAAGATCGAGCAGCCACCCTCCAAGGA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCCATGGTTTCCGTCTaGAGGATCAGGAACCGGCCA +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATSMVSV*RIRNRP
Trigger: TGGCCGGTTCCTGATCCTGCAGACGGAAACCATGGA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGATGGTCCTCTTGAACTaGTCTATTTTTGAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLMVLLN*SIFERV
Trigger: CACTCGCTCAAAAATAGAGCAGTTCAAGAGGACCAT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATCGGTGCAGGTGCAATaGCGTGGTCAGTGTCATGTA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITSVQVQ*RGQCHV
Trigger: TACATGACACTGACCACGGCATTGCACCTGCACCGA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTAAAGAGAATGATTTCTaGAATGAGGGTGGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSKENDF*NEGGVR
Trigger: CCTGACTCCACCCTCATTGCAGAAATCATTCTCTTT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCCAGAATCTTGCAGTTaGCAAAGCCCTCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGPESCS*QSPLQR
Trigger: TCTTTGGAGAGGGCTTTGGCAACTGCAAGATTCTGG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCATTGGATGTGGTCTGTaGGGACATGTTGACAACGAG +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGIGCGL*GHVDNE
Trigger: CTCGTTGTCAACATGTCCGCACAGACCACATCCAAT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGCCTGGTCTATGATATaGGACTGGATCTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLAWSMI*DWISSN
Trigger: ATTTGAAGAGATCCAGTCGCATATCATAGACCAGGC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGGCATTGTCAGCCAGTaGCTGACACTTGATTTCCTC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRGIVSQ*LTLDFL
Trigger: GAGGAAATCAAGTGTCAGGCACTGGCTGACAATGCC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTAGAATCATAACTGCCTaGATCACTATCTCCACTTGG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSRIITA*ITISTW
Trigger: CCAAGTGGAGATAGTGATGCAGGCAGTTATGATTCT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGTGATCTTGGAGGTATaGAGCGTGTTCACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITVILEV*SVFTSC
Trigger: GCAGCTGGTGAACACGCTGCATACCTCCAAGATCAC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCATTCAGGTAGTCAATaGGGTCCTCCAGCTTATTGC +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLHSGSQ*GPPAYC
Trigger: GCAATAAGCTGGAGGACCGCATTGACTACCTGAATG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGATCCCAGTAGGCATCTaGAAGCCAGCTACTACATGG +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWIPVGI*KPATTW
Trigger: CCATGTAGTAGCTGGCTTGCAGATGCCTACTGGGAT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAGTCACGAGGGTACTaGTCAAAGGAGTTCATGAGT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGQSRGY*SKEFMS
Trigger: ACTCATGAACTCCTTTGAGCAGTACCCTCGTGACTG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACAGTCACGAGGGTACTaGTCAAAGGAGTTCATGAGT +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQQSRGY*SKEFMS
Trigger: ACTCATGAACTCCTTTGAGCAGTACCCTCGTGACTG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATTGGTATACCACAGGTaGCAGTCACGAGGGTACTGC +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITLVYHR*QSRGYC
Trigger: GCAGTACCCTCGTGACTGGCACCTGTGGTATACCAA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTCCGTTGCATTTCATTaGAGGCATTTTCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSSVAFH*RHFPTH
Trigger: GTGAGTGGGAAAATGCCTGCAATGAAATGCAACGGA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTATCTTGATGCTGACCTaGAAGATTGAGATAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSILMLT*KIEIGK
Trigger: CTTCCCTATCTCAATCTTGCAGGTCAGCATCAAGAT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTAATGAGGTACTTAAGTaGGTCCCAAGGTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLNEVLK*VPRCLL
Trigger: GAGGAGACACCTTGGGACGCACTTAAGTACCTCATT...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAATCAAAGAGGGTTTGTaGCTCAGTGATCTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQIKEGL*LSDLRG
Trigger: GCCTCTCAGATCACTGAGGCACAAACCCTCTTTGAT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTATCTCTGGATCTCCTaGAGAAGGACCACATTGAGG +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGYLWIS*RRTTLR
Trigger: CCTCAATGTGGTCCTTCTGCAGGAGATCCAGAGATA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTGGGGATACACTAGGTTaGTGTCATCCACAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLGDTLG*CHPQWK
Trigger: TTTCCACTGTGGATGACAGCAACCTAGTGTATCCCC...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTGTGCAGGCAAAACCTTaGCACGCTGACCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFVQAKP*HADPPL
Trigger: GAGGGGAGGGTCAGCGTGGCAAGGTTTTGCCTGCAC...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTCTTGCAGGTCCTCCTTaGTGGAAGAGACATATCCCT +
Preference number: 4 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLILAGPP*WKRHIP
Trigger: AGGGATATGTCTCTTCCAGCAAGGAGGACCTGCAAG...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGGAAGGTCACAGTGGTaGCTCTCTCAGAAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITGRSQW*LSQKGR
Trigger: CCTACCTTTCTGAGAGAGGCACCACTGTGACCTTCC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGTCTTCTCAGCTTTGCTaGACATCGTGCAGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: LVAEQRHHWFSQIVEWFLSSQLC*TSCRQN
Trigger: GTTTTGCCTGCACGATGTCCAGCAAAGCTGAGAAGA...CAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCACTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCAAAGTGTTCCAGAATaGCATCATGCTCCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLQSVPE*HHAPVS
Trigger: GGACACAGGAGCATGATGCCATTCTGGAACACTTTG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGATTCTGTAGGGTCCTaGGCAAAGTGTTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGDSVGS*AKCSRM
Trigger: CATTCTGGAACACTTTGCCCAGGACCCTACAGAATC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCAGGCTTCATGTTCATaGCCTCTGCAGGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWQASCS*PLQGCR
Trigger: TCTACATCCCTGCAGAGGCCATGAACATGAAGCCTG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGTTCCGTGTTATCTGTaGCCCCTGGGCACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITVPCYL*PLGTKE
Trigger: TTCTTTGGTGCCCAGGGGCCACAGATAACACGGAAC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCTTGATGTCCACTCTTaGAAGGTTTTTCGAACCAGC +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSLDVHS*KVFRTS
Trigger: GCTGGTTCGAAAAACCTTCCAAGAGTGGACATCAAG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGGCAGAAGACAGAGATaGTGGAAAAGAGGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWGRRQR*WKRGGC
Trigger: GCAACCACCTCTTTTCCACCATCTCTGTCTTCTGCC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCCACAACTGTTTGGATaGGTTCACGATGTAACTTGC +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSPQLFG*VHDVTC
Trigger: GCAAGTTACATCGTGAACCCATCCAAACAGTTGTGG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTGCTCCACAACTGTTTaGATGGGTTCACGATGTAAC +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSCSTTV*MGSRCN
Trigger: GTTACATCGTGAACCCATCCAAACAGTTGTGGAGCA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCATGCCGCTGCTGATTTaGGTCTGGATCTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGMPLLI*VWIFLM
Trigger: CATCAAGAAGATCCAGACCCAAATCAGCAGCGGCAT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTCCAGCAGCACAAACTaGATGTTGGTGACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRSSSTN*MLVTVS
Trigger: GGAGACAGTCACCAACATCCAGTTTGTGCTGCTGGA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACAAATTGCTCGTGTATaGGAGGGATCTGAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQQIARV*EGSESP
Trigger: TGGAGACTCAGATCCCTCCCATACACGAGCAATTTG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCGCACTTGTGTAATCTaGTCTAAGGCAGACATGTAT +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSERTCVI*SKADMY
Trigger: ATACATGTCTGCCTTAGACCAGATTACACAAGTGCG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAAGGTCCTTGGAGGGTaGCTGCTCGATCTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRKVLGG*LLDLED
Trigger: ATCTTCAAGATCGAGCAGCCACCCTCCAAGGACCTT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTCACATCCCAGGTCTTaGCAATGTTTTGTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLSHPRS*QCFVKP
Trigger: TGGCTTTACAAAACATTGCCAAGACCTGGGATGTGA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCACATCCCAGGTCTTaGCAATGTTTTGTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSESHPRS*QCFVKP
Trigger: TGGCTTTACAAAACATTGCCAAGACCTGGGATGTGA...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCAGTTGCCAAAGCCCTCTCCAAAGAGAATGATTTCTGCAATGAGGGTGGAGTCCAGTTGCTGTTGACCTaGTCAAATAAGGTCGATTCA +
Preference number: 4 (lower is better)
Translates to: AVAKALSKENDFCNEGGVQLLLT*SNKVDS
Trigger: TGAATCGACCTTATTTGACCAGGTCAACAGCAACTG...GACTCCACCCTCATTGCAGAAATCATTCTCTTTGGAGAGGGCTTTGGCAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTTCAGGATTGACACCTaGTTCTTCTTCATGACCTTG +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLFRIDT*FFFMTL
Trigger: CAAGGTCATGAAGAAGAACCAGGTGTCAATCCTGAA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTTTCAGGATTGACACCTaGTTCTTCTTCATGACCTTG +
Preference number: 4 (lower is better)
Translates to: TGSSMLGNRSCTMALNRGFRIDT*FFFMTL
Trigger: CAAGGTCATGAAGAAGAACCAGGTGTCAATCCTGAA...ACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACCCCAAGCTCCAGTCTaGGCCAGACCTGAGTACATT +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATPQAPV*ARPEYI
Trigger: AATGTACTCAGGTCTGGCCCAGACTGGAGCTTGGGG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTCAAAGCCATCAAAATaGAAATGGGTGAGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGSKPSK*KWVRPA
Trigger: TGCCGGCCTCACCCATTTCCATTTTGATGGCTTTGA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACACCACCATGGCAATTaGGCGGAACATGGATTTAAG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQHHHGN*AEHGFK
Trigger: CTTAAATCCATGTTCCGCCCAATTGCCATGGTGGTG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAAGTCAGGCACCACCATaGCAATTGGGCGGAACATGG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATSQAPP*QLGGTW
Trigger: CCATGTTCCGCCCAATTGCCATGGTGGTGCCTGACT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAGGCAGCTCAATGTTaGGAAACAGATCTTGCACGA +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGQAAQC*ETDLAR
Trigger: TCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGACGATCATGGTGGAGTaGCGGGAGTTCTTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRTIMVE*REFLVS
Trigger: TGAAACCAAGAACTCCCGCCACTCCACCATGATCGT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTAGGGACAATGCCTTaGGGTTCAAAGGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRLGTMP*GSKGTL
Trigger: GAGAGTTCCCTTTGAACCCCAAGGCATTGTCCCTAG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTATACCGTGTCCTTATTaGGAAAGGAGCCCTCGATCT +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLIPCPY*ERSPRS
Trigger: AGATCGAGGGCTCCTTTCCCAATAAGGACACGGTAT...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAATAGAAGGGGGCGTTTaGAGGGTAGCGCCAACTCTT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITIEGGV*RVAPTL
Trigger: AAGAGTTGGCGCTACCCTCCAAACGCCCCCTTCTAT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTGCTCTGCACGTTATTaGATGTGGTCTGTGCGGACA +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRCSARY*MWSVRT
Trigger: TGTCCGCACAGACCACATCCAATAACGTGCAGAGCA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTAGCTCCACCCCAGCCTaGCGATACAGACGCTTGATA +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQISSTPA*RYRRLI
Trigger: TATCAAGCGTCTGTATCGCCAGGCTGGGGTGGAGCT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGCAGTTCACCAAGGCTaGGTACTGGCGGATCCAGTT +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIAVHQG*VLADPV
Trigger: AACTGGATCCGCCAGTACCCAGCCTTGGTGAACTGC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCTGTCCGCAGTTTATTaGCTTGGGCCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQILSAVY*LGPAAP
Trigger: AGGAGCTGCTGGCCCAAGCCAATAAACTGCGGACAG...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATCTCATCCCGGTAGTTaGTCAGGAAGGGTCCCATGT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITSHPGS*SGRVPC
Trigger: ACATGGGACCCTTCCTGACCAACTACCGGGATGAGA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGGTATCCAAAGTGAATaGCGTGTTCTAGGATTCGCA +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSGIQSE*RVLGFA
Trigger: TGCGAATCCTAGAACACGCCATTCACTTTGGATACC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGTGAGAACTGGTACATaGGGTCGATGCAGCCCATAT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWVRTGT*GRCSPY
Trigger: ATATGGGCTGCATCGACCCCATGTACCAGTTCTCAC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTAGCTTATTGCTGCGGTaGCTTTTGTCAATGCTGAGA +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSSLLLR*LLSMLR
Trigger: TCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCT...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCAGTGTGTTGTATCTCTaGATCTCCTGCAGAAGGACC +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGSVLYL*ISCRRT
Trigger: GGTCCTTCTGCAGGAGATCCAGAGATACAACACACT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCACTGAAACGTTGTTTTaGCGAGCTGAAGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGTETLF*RAEDCS
Trigger: GCTGCAGTCTTCAGCTCGCCAAAACAACGTTTCAGT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTGCAGGTCCTCCTTGCTaGAAGAGACATATCCCTCAA +
Preference number: 4 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLIAGPPC*KRHIPQ
Trigger: TTGAGGGATATGTCTCTTCCAGCAAGGAGGACCTGC...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGTGCAGGCAAAACCTaGGTCTATCGCTTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRRAGKT*VYRFEV
Trigger: GACTTCAAAGCGATAGACCCAGGTTTTGCCTGCACG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
3UTR CAA 72 bp TTGTTCATCCTGTCCATGATGGCTTTCCAGTTGCTGTaGACCTGGTCAAATAAGGTCGATTCATTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LFILSMMAFQLL*TWSNKVDSLGS
Trigger: GCTGCCCAATGAATCGACCTTATTTGACCAGGTCAACAGCAACTGGAAAGCCATCATGGACAGGATGAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 72 bp ACAGTCATCAAGATCCTTCTCCCAGTAGAACCGAAGTaGGCTGAGCCAGTCAAAGGAATTGACATCCATGAG +
Preference number: 4 (lower is better)
Translates to: TVIKILLPVEPK*AEPVKGIDIHE
Trigger: CTCATGGATGTCAATTCCTTTGACTGGCTCAGCCAACTTCGGTTCTACTGGGAGAAGGATCTTGATGACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 72 bp ATGGCATTGAACAGGGGTGCATCAACTGAAGTGAGCTaGGCGATGTTCATATCTCTCATTGAGAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: MALNRGASTEVS*AMFISLIESSR
Trigger: TCTGCTGCTCTCAATGAGAGATATGAACATCGCCAAGCTCACTTCAGTTGATGCACCCCTGTTCAATGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACTGGTGCTTGGCGAATaGAGTAGACAAGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITLVLGE*SRQAGS
Trigger: AGAACCAGCTTGTCTACTTCATTCGCCAAGCACCAG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTAGGTTTGACTGTGCTTaGCGAGAGCCATCCTGGATC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIRFDCA*REPSWI
Trigger: GATCCAGGATGGCTCTCGTCAAGCACAGTCAAACCT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGTGTGCAGATTTTTATaGAAGATGTCCTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSVCRFL*KMSSIS
Trigger: GGAGATTGAGGACATCTTTCATAAAAATCTGCACAC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTTCACCTCCAGGTCCTTaGTTCCGGCACGGAACTTAT +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFSPPGP*FRHGTY
Trigger: ATAAGTTCCGTGCCGGAATCAAGGACCTGGAGGTGA...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAACTCGAAGGCTGAGGTaGTCAGGTTCTGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATTRRLR*SGSGSS
Trigger: TGATGACCCAGAACCTGATCACCTCAGCCTTCGAGT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTACTCGAAGGCTGAGGTaGTCAGGTTCTGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFTRRLR*SGSGSS
Trigger: TGATGACCCAGAACCTGATCACCTCAGCCTTCGAGT...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGGGCCAGCTCGCTATTaGACAGCATGTAGAGATCCA +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIGPARY*TACRDP
Trigger: TGGATCTCTACATGCTGTTCAATAGCGAGCTGGCCC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTATGTGCTTTCTTCTTaGAGTCATCTGCCGAGTGGA +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGYVLSS*SHLPSG
Trigger: TCCACTCGGCAGATGACTTCAAGAAGAAAGCACATA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACTTTGGCTAATTTTGTaGGGCGACGAAACAGCCCGT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITLWLIL*GDETAR
Trigger: ACGGGCTGTTTCGTCGCCTCACAAAATTAGCCAAAG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGAGGCATGGTCCTCTTaGACTGCTCTATTTTTGAGC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIREAWSS*TALFLS
Trigger: GCTCAAAAATAGAGCAGTTCAAGAGGACCATGCCTC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATCTGCTCCAAGGTaGAGCTTTCAGATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGQSAPR*SFQIPD
Trigger: ATCAGGAATCTGAAAGCTTCACCTTGGAGCAGATTG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGGTACTATGTCGAGCTaGGTCACATCCCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIGTMSS*VTSQVL
Trigger: CAAGACCTGGGATGTGACTCAGCTCGACATAGTACC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGGCCTTGACAAAGCGTaGTGCCTTCATGGTAGACAG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIGLDKA*CLHGRQ
Trigger: CTGTCTACCATGAAGGCATCACGCTTTGTCAAGGCC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACCTTCTCAAAGGCCTTaGCAAAGCGTGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITPSQRP*QSVMPS
Trigger: TGAAGGCATCACGCTTTGTCAAGGCCTTTGAGAAGG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAACACATCCCGGGCATaGATTTCTATCGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRNTSRA*ISIVTR
Trigger: TCTGGTGACGATAGAAATTCATGCCCGGGATGTGTT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGAACACATCCCGGGCATaGATTTCTATCGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWNTSRA*ISIVTR
Trigger: TCTGGTGACGATAGAAATTCATGCCCGGGATGTGTT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATGTTGGTCTGGCGGATaGCACAGTCATCAAGATCCT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITCWSGG*HSHQDP
Trigger: AGGATCTTGATGACTGTGTCATCCGCCAGACCAACA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACTTGCACGATGGCATTaGACAGGGGTGCATCAACTG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATLARWH*TGVHQL
Trigger: CAGTTGATGCACCCCTGTTCAATGCCATCGTGCAAG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GTTACCCAAGTACTCATAATTATACTGAAATTGCGTGTTGGTCTGGCGGATGACGCTTGCCATAGTCAATaGCAGGCAGCTCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: VTQVLIIILKLRVGLADDACHSQ*QAAQCW
Trigger: CCAACATTGAGCTGCCTGTCATTGACTATGGCAAGC...GTCATCCGCCAGACCAACACGCAATTTCAGTATAATTATGAGTACTTGGGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACCTCTTCTCCAGCCATaGCTGAACATAGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATPLLQP*LNIGLP
Trigger: TGGAAGCCCTATGTTCAGTCATGGCTGGAGAAGAGG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAAGATGTCTCGAAGGTTaGAGAGGTAATGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQRCLEG*RGNASW
Trigger: CCAAGATGCATTACCTCTTCAACCTTCGAGACATCT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGCACTGTCAGATCCGTaGGGTCTTCATACACCTTGG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATALSDP*GLHTPW
Trigger: CCAAGGTGTATGAAGACCTCACGGATCTGACAGTGC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACTGTGGATATTCTCCTaGGTTCCCAGGTCTACTCCT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITLWIFS*VPRSTP
Trigger: AGGAGTAGACCTGGGAACTCAGGAGAATATCCACAG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCCAGTGCCTGACACTTaGTTTCCTCAACTGCAATCT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWPVPDT*FPQLQS
Trigger: AGATTGCAGTTGAGGAAATCAAGTGTCAGGCACTGG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGACCGGGTATCCAAAGTaGATGGCGTGTTCTAGGATT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWTGYPK*MACSRI
Trigger: AATCCTAGAACACGCCATTCACTTTGGATACCCGGT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATATTCCTGCACGTTCTaGAGTAGCACCGGGTATCCA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITYSCTF*SSTGYP
Trigger: TGGATACCCGGTGCTACTTCAGAACGTGCAGGAATA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATGTATTCATCCATGTTaGGCTTGCCAGAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQCIHPC*ACQKSP
Trigger: TGGAGACTTCTGGCAAGCTCAACATGGATGAATACA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTGTATTCATCCATGTTaGGCTTGCCAGAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLCIHPC*ACQKSP
Trigger: TGGAGACTTCTGGCAAGCTCAACATGGATGAATACA...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCATCAAAGATGCAATTaGAAATCTCTTCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSHQRCN*KSLPGL
Trigger: CAAGCCTGGAAGAGATTTTCAATTGCATCTTTGATG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGTTGTTTTGGCGAGCTaGAGACTGCAGCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATVVLAS*RLQHSS
Trigger: ACTGCTGTGCTGCAGTCTTCAGCTCGCCAAAACAAC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CCGGGCATGAATTTCTATCGTCACCAGAGCCACAATTTTAAGCCGCATGATCTTGGCATCGAGCTCCTTTaGATTCGAAATCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PGMNFYRHQSHNFKPHDLGIELL*IRNLPE
Trigger: TTCTGGAAGATTTCGAATTCAAAGGAGCTCGATGCC...AAGATCATGCGGCTTAAAATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTTTCAAATTGTGTCATaGGGAAAAAGCAATTGGGGC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSFQIVS*GKSNWG
Trigger: GCCCCAATTGCTTTTTCCTCATGACACAATTTGAAA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCTGTTTTGTGTGTACTaGGGTCTCTTAGCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGLFCVY*GLLAEL
Trigger: CAACTCTGCTAAGAGACCTCAGTACACACAAAACAG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGCTTCTTCTCAGCTTTaGTGGACATCGTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITASSQL*WTSCRQ
Trigger: TTGCCTGCACGATGTCCAGCAAAGCTGAGAAGAAGC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAAGGCCAGCCTGTGTTTaGAAAGATCTGAGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITRPACV*KDLRGK
Trigger: TTTGCCCCTCAGATCTTTGCAAACACAGGCTGGCCT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAAGCATCTCCTTTATCTaGCGGGTCCAGTGGATCATG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITSISFI*RVQWIM
Trigger: CATGATCCACTGGACCCGGCAGATAAAGGAGATGCT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGGTCCATGCATCGGTTaGGCCAGAACTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIGPCIG*ARTQSP
Trigger: AGGAGATTGAGTTCTGGCGCAACCGATGCATGGACC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACCCTTCTTCACCAGCTaGTTACTGATGCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATPFFTS*LLMPDR
Trigger: CCTGTCTGGCATCAGTAAGCAGCTGGTGAAGAAGGG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCAATCATCTGCACCTTaGTGGCATGTATACGGCACT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRQSSAP*WHVYGT
Trigger: AGTGCCGTATACATGCCAGCAAGGTGCAGATGATTG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTCATTCACAATCATCTaGACCTTGCTGGCATGTATA +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSSFTII*TLLACI
Trigger: TATACATGCCAGCAAGGTGCAGATGATTGTGAATGA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAATGGTCAGAGTGGATaGCTTGAACTCATTCACAAT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLNGQSG*LELIHN
Trigger: ATTGTGAATGAGTTCAAGGCATCCACTCTGACCATT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATTTCTGCTGTACAGCTaGCCGATGCTCTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITFLLYS*PMLSLV
Trigger: GACCAAAGAGAGCATCGGGCAGCTGTACAGCAGAAA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGTGCCACACTTCCTTaGAGATCATTCTTCAAAATG +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSECATLP*RSFFKM
Trigger: CATTTTGAAGAATGATCTGCAAGGAAGTGTGGCACA...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTAGGGAGAACTTGAGGTaGGAACAGTCCAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIRENLR*EQSSST
Trigger: TGTGCTGCTGGACTGTTCGCACCTCAAGTTCTCCCT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GTTACCCAAGTACTCATAATTATACTGAAATTGCGTGTTGGTCTGGCGGATGACGCGGCTGATTTTCTCTaGGTTCTCCTTCAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: VTQVLIIILKLRVGLADDAADFL*VLLQVG
Trigger: ACCTACCTGAAGGAGAACGCAGAGAAAATCAGCCGC...GTCATCCGCCAGACCAACACGCAATTTCAGTATAATTATGAGTACTTGGGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGTTATCTTCCAGTaGCTGGAATACTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSLVIFQ*LEYFFC
Trigger: ACAGAAGAAGTATTCCAGGCACTGGAAGATAACCAG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTTGGGAAACAGATCTTaGACGATGGCATTGAACAGG +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGLGNRS*TMALNR
Trigger: CCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCTCTCAATGATGCTCTaGACGTTATTGGATGTGGTC +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGLSMML*TLLDVV
Trigger: GACCACATCCAATAACGTGCAGAGCATCATTGAGAG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCTTGATTTCCTCAACTaGAATCTTTTCACTGTTGGC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSLDFLN*NLFTVG
Trigger: GCCAACAGTGAAAAGATTGCAGTTGAGGAAATCAAG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTACGATCAGCATCCGTTaGATTTCATTGCAGGCATTT +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSTISIR*ISLQAF
Trigger: AAATGCCTGCAATGAAATGCAACGGATGCTGATCGT...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAATGAGGTACTTAAGTaGGTCCCAAGGTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRNEVLK*VPRCLL
Trigger: GAGGAGACACCTTGGGACGCACTTAAGTACCTCATT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGAGAACAGGATGGTCTaGATCAGTGTGTTGTATCTC +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQENRMV*ISVLYL
Trigger: GAGATACAACACACTGATGCAGACCATCCTGTTCTC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTCTTTGCTGGACATCGTaGAGGCAAAACCTTGCCACG +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFLCWTS*RQNLAT
Trigger: CGTGGCAAGGTTTTGCCTGCACGATGTCCAGCAAAG...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTCGTGACAACAGAGAATaGAGCCTTGCAGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFRDNRE*SLAGPP
Trigger: AGGAGGACCTGCAAGGCTGCATTCTCTGTTGTCACG...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTCTGGAGAACTGGATGTaGATCTGCACAGCCTGTACG +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFLENWM*ICTACT
Trigger: CGTACAGGCTGTGCAGATGCACATCCAGTTCTCCAG...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCACACAAATATTCCTTaGTCCCTCTCCCTCCACAAC +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWHTNIP*SLSLHN
Trigger: GTTGTGGAGGGAGAGGGAGCAAGGAATATTTGTGTG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTGATTCTGTAGGGTCCTaGGCAAAGTGTTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLIDSVGS*AKCSRM
Trigger: CATTCTGGAACACTTTGCCCAGGACCCTACAGAATC...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACCAAGTAGGACGACTTaGCAAGGTGCAGGATGGATT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITPSRTT*QGAGWI
Trigger: AATCCATCCTGCACCTTGCCAAGTCGTCCTACTTGG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGTTCCGTGTTATCTGTaGCCCCTGGGCACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIVPCYL*PLGTKE
Trigger: TTCTTTGGTGCCCAGGGGCCACAGATAACACGGAAC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTCCGTGTTATCTGTaGCCCCTGGGCACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFVPCYL*PLGTKE
Trigger: TTCTTTGGTGCCCAGGGGCCACAGATAACACGGAAC...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCTTGATGTCCACTCTTaGAAGGTTTTTCGAACCAGC +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGLDVHS*KVFRTS
Trigger: GCTGGTTCGAAAAACCTTCCAAGAGTGGACATCAAG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTTCTCTGACATCTCTTaGGCTCGCCAGCCAATGGTC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIFSDIS*ARQPMV
Trigger: GACCATTGGCTGGCGAGCCCAAGAGATGTCAGAGAA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATTGGAAGAGTGGGTTTaGGCTGGTCTTTCCATCCCC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATLEEWV*AGLSIP
Trigger: GGGGATGGAAAGACCAGCCCAAACCCACTCTTCCAA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCAAAATGACAAGGACTTaGAAGAGTGGGTTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGKMTRT*KSGFGL
Trigger: CAGCCCAAACCCACTCTTCCAAGTCCTTGTCATTTT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACCACAACTGTTTGGATaGGTTCACGATGTAACTTGC +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQPQLFG*VHDVTC
Trigger: GCAAGTTACATCGTGAACCCATCCAAACAGTTGTGG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTGCTCCACAACTGTTTaGATGGGTTCACGATGTAAC +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGCSTTV*MGSRCN
Trigger: GTTACATCGTGAACCCATCCAAACAGTTGTGGAGCA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTCGTACTTTTCAAGAATaGCAAATTGCTCGTGTATGG +
Preference number: 4 (lower is better)
Translates to: TGSSMLGNRSCTMALNRGRTFQE*QIARVW
Trigger: CCATACACGAGCAATTTGCCATTCTTGAAAAGTACG...ACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTATCTCCCAGATTTGCTaGAGGGCATCGAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIISQIC*RASSSF
Trigger: GAAGGAGCTCGATGCCCTCCAGCAAATCTGGGAGAT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTTATCTTCCAGTGCCTaGAATACTTCTTCTGTACCT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLLSSSA*NTSSVP
Trigger: AGGTACAGAAGAAGTATTCCAGGCACTGGAAGATAA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGATAAGGTCGATTCATTaGGCAGCTGCTTGCGGATGT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRIRSIH*AAACGC
Trigger: ACATCCGCAAGCAGCTGCCCAATGAATCGACCTTAT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTAGTGGCGGGAGTTCTTaGTTTCATACAACTGGAAAA +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSSGGSS*FHTTGK
Trigger: TTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGATACCGTGTCCTTATTaGGAAAGGAGCCCTCGATCT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWIPCPY*ERSPRS
Trigger: AGATCGAGGGCTCCTTTCCCAATAAGGACACGGTAT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGAATGGGATTCTGGTTaGCCACCAAGCTGCTCACCA +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATEWDSG*PPSCSP
Trigger: TGGTGAGCAGCTTGGTGGCCAACCAGAATCCCATTC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCTGGACTTGGTATCATaGAAGTCCTTGTTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLLDLVS*KSLLAL
Trigger: TAGAGCCAACAAGGACTTCCATGATACCAAGTCCAG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCCTCGATCTGGAAGGTaGTGTAGTCGCAGATGGATG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIPRSGR*CSRRWM
Trigger: CATCCATCTGCGACTACACCACCTTCCAGATCGAGG...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCAATCTTTTCACTGTTaGCTGTTACGGCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLQSFHC*LLRPSA
Trigger: AGCAGAAGGCCGTAACAGCCAACAGTGAAAAGATTG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATATCTCCACTTGGGCTaGGGGCCGTCCATAAGACTT +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATYLHLG*GPSIRL
Trigger: AAGTCTTATGGACGGCCCCCAGCCCAAGTGGAGATA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGCATGGGGTTCAGTGTaGGGTCCAGATATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIAWGSV*GPDIPA
Trigger: TGCAGGAATATCTGGACCCCACACTGAACCCCATGC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACATGGATTGTCCATTTaGCCCTCCCGATCCAAGACC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATHGLSI*PSRSKT
Trigger: GGTCTTGGATCGGGAGGGCCAAATGGACAATCCATG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAAGCCAGCTACTACATaGATTGTCCATTTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRKPATT*IVHLAL
Trigger: GAGGGCCAAATGGACAATCCATGTAGTAGCTGGCTT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGAGTTCATGAGTCCGTaGAAGTTGGTCAGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGEFMSP*KLVSLS
Trigger: AGACAAACTGACCAACTTCCACGGACTCATGAACTC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGAGTGTGTTGTATCTCTaGATCTCCTGCAGAAGGACC +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWSVLYL*ISCRRT
Trigger: GGTCCTTCTGCAGGAGATCCAGAGATACAACACACT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGGAAAAGGGGCCAGGTaGCTCCTGTACTTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFGKGAR*LLYLSK
Trigger: CTTTGACAAGTACAGGAGCCACCTGGCCCCTTTTCC...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTGGACCCAGCCCCGACTaGAGAACTGGATGTGCATCT +
Preference number: 4 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFGPSPD*RTGCAS
Trigger: AGATGCACATCCAGTTCTCCAGTCGGGGCTGGGTCC...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000570791.5
3UTR CAA 72 bp ACCTGGTCAAATAAGGTCGATTCATTGGGCAGCTGCTaGCGGATGTCTTCTCCTAGGAAGATATTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: TWSNKVDSLGSC*RMSSPRKIFSK
Trigger: CTTAGAGAATATCTTCCTAGGAGAAGACATCCGCAAGCAGCTGCCCAATGAATCGACCTTATTTGACCAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 72 bp ATCGTCACCAGAGCCACAATTTTAAGCCGCATGATCTaGGTCAAGTTCCCCCTGATGGCTTCTGAATACTTA +
Preference number: 4 (lower is better)
Translates to: IVTRATILSRMI*VKFPLMASEYL
Trigger: TAAGTATTCAGAAGCCATCAGGGGGAACTTGACCAAGATCATGCGGCTTAAAATTGTGGCTCTGGTGACGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574518.1
3UTR CAA 72 bp GCCCGAGTTACCCAAGTACTCATAATTATACTGAAATaGCGTGTTGGTCTGGCGGATGACACAGTCATCAAG +
Preference number: 4 (lower is better)
Translates to: ARVTQVLIIILK*RVGLADDTVIK
Trigger: CTTGATGACTGTGTCATCCGCCAGACCAACACGCAATTTCAGTATAATTATGAGTACTTGGGTAACTCGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTTGCCTCGGGCTCCACTaGTTCTTCACTCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFCLGLH*FFTLCL
Trigger: CAAGCACAGAGTGAAGAATCAGTGGAGCCCGAGGCA...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTCTGGTGCTTGGCGAATaGAGTAGACAAGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFLVLGE*SRQAGS
Trigger: AGAACCAGCTTGTCTACTTCATTCGCCAAGCACCAG...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTTCACCAGCTGCTTACTaGTGCCAGACAGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFSPAAY*CQTGPC
Trigger: GCATGGACCTGTCTGGCATCAGTAAGCAGCTGGTGA...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGATCATTCTTCAAAATaGCAAGGACTTGGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSDHSSK*QGLGRV
Trigger: CACTCTTCCAAGTCCTTGTCATTTTGAAGAATGATC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACAAACTGGATGTTGGTaGCTGTCTCCTCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATQTGCW*LSPPSA
Trigger: TGCAGAAGGAGGAGACAGTCACCAACATCCAGTTTG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTATGTGCTTTCTTCTTaGAGTCATCTGCCGAGTGGA +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWYVLSS*SHLPSG
Trigger: TCCACTCGGCAGATGACTTCAAGAAGAAAGCACATA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGAACTGCTCTATTTTTaGGCGAGTGGTTTCAATAAT +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEELLYF*ASGFNN
Trigger: ATTATTGAAACCACTCGCTCAAAAATAGAGCAGTTC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGAACTGCTCTATTTTTaGGCGAGTGGTTTCAATAAT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLELLYF*ASGFNN
Trigger: ATTATTGAAACCACTCGCTCAAAAATAGAGCAGTTC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAATTTTCTCCACATGCTaGTCCATCCCAAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITIFSTC*SIPSST
Trigger: TGTGGAGCTTGGGATGGATCAGCATGTGGAGAAAAT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATGTTCATCCTGTCCATaGTGGCTTTCCAGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITCSSCP*WLSSCC
Trigger: ACAGCAACTGGAAAGCCATCATGGACAGGATGAACA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTATACTTATTCAGGATTaGCACCTGGTTCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSILIQD*HLVLLH
Trigger: ATGAAGAAGAACCAGGTGTCAATCCTGAATAAGTAT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGTTCATATCTCTCATTaGGAGCAGCAGAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRVHISH*EQQNLF
Trigger: GAAGAGGTTCTGCTGCTCTCAATGAGAGATATGAAC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTCCATTCATTGGTGCTaGGGTCATATTCCCCATACA +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRSIHWC*GHIPHT
Trigger: TGTATGGGGAATATGACCTCAGCACCAATGAATGGA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACCTTGTTATCGTCCATaGCGGAGTTCATGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITPCYRP*RSSCSR
Trigger: TCGAGAACATGAACTCCGTCATGGACGATAACAAGG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTCATCTCTACCATGGTaGCATAGTTCTCGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQISSLPW*HSSRRQ
Trigger: CTGACGGCGAGAACTATGTCACCATGGTAGAGATGA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGAGCTTGTCCTCAAATaGTGTCCAACTCCGTATTTT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGELVLK*CPTPYF
Trigger: AAAATACGGAGTTGGACATCATTTGAGGACAAGCTC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAGATGTCTCGAAGGTTaGAGAGGTAATGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRRCLEG*RGNASW
Trigger: CCAAGATGCATTACCTCTTCAACCTTCGAGACATCT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATTGTCAGCCAGTGCCTaGCACTTGATTTCCTCAACT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITLSASA*HLISST
Trigger: AGTTGAGGAAATCAAGTGTCAGGCACTGGCTGACAA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGCCGTCCATAAGACTTaGTCTCTCCTATATCCTTCT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWAVHKT*SLLYPS
Trigger: AGAAGGATATAGGAGAGATCAAGTCTTATGGACGGC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATGCAGCCCATATCATTaGGCACGAAGAACAGGATTG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITCSPYH*ARRTGL
Trigger: CAATCCTGTTCTTCGTGCTCAATGATATGGGCTGCA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCACACATATGAAAACTaGATAGTAGTTTGTGGCGTT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLHTYEN*IVVCGV
Trigger: AACGCCACAAACTACTATTCAGTTTTCATATGTGTG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATGCCATCCTTGGGGATaGAATAAGTCTCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATCHPWG*NKSPVL
Trigger: CAGCACTGGAGACTTATTTCATCCCCAAGGATGGCA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTGAAGAAGGCATGGTCTaGCAGCCCCACCAACAGTCA +
Preference number: 4 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFEEGMV*QPHQQS
Trigger: TGACTGTTGGTGGGGCTGTCAGACCATGCCTTCTTC...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp GAGGCCACTCTTGTAAAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTTCAAGGTTGTCCTTTTaGAAAATCACTCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: EATLVKLLQHIPGMNFYRSRLSF*KITLLL
Trigger: GAGCAAGAGAGTGATTTTTCAAAAGGACAACCTTGA...ACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTTTACAAGAGTGGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR GCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGGTGATGGGAACTGGTaGTTGGCGAATGAAGTAGAC +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFGDGNW*LANEVD
Trigger: GTCTACTTCATTCGCCAAGCACCAGTTCCCATCACC...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTAGGCCAGCCTGTGTTTaGAAAGATCTGAGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFRPACV*KDLRGK
Trigger: TTTGCCCCTCAGATCTTTGCAAACACAGGCTGGCCT...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGAGGTCTCTAGCCGTTaGACCAGCTCTTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATEVSSR*TSSLSF
Trigger: AAAGGACAAAGAGCTGGTGCAACGGCTAGAGACCTC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAAGGATGGATTCAACGTaGTTCACTCCCTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITRMDST*FTPFFT
Trigger: GGTGAAGAAGGGAGTGAAGCACGTTGAATCCATCCT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAATCCTGGATCTGCTGTaGCAGTTTCATAAAGGGCGC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATILDLL*QFHKGR
Trigger: GCGCCCTTTATGAAACTGGCACAGCAGATCCAGGAT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGAGCCATCCTGGATCTaGTGTGCCAGTTTCATAAAG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITEPSWI*CASFIK
Trigger: CTTTATGAAACTGGCACAGCAGATCCAGGATGGCTC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTCATTCACAATCATCTaGACCTTGCTGGCATGTATA +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSSFTII*TLLACI
Trigger: TATACATGCCAGCAAGGTGCAGATGATTGTGAATGA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGTCACCACATCCTGGTaGAGGTTCATCAATTTCTGC +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITVTTSW*RFINFC
Trigger: GCAGAAATTGATGAACCTGCACCAGGATGTGGTGAC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAACACCTGCCAAAGTCTaGAGAGTGGGTGAGAATTCC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATTPAKV*RVGENS
Trigger: GGAATTCTCACCCACTCTGCAGACTTTGGCAGGTGT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGCGGCTGATTTTCTCTaGGTTCTCCTTCAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIAADFL*VLLQVG
Trigger: ACCTACCTGAAGGAGAACGCAGAGAAAATCAGCCGC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAATGGTCCTCTTGAACTaGTCTATTTTTGAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQMVLLN*SIFERV
Trigger: CACTCGCTCAAAAATAGAGCAGTTCAAGAGGACCAT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGATTCATTGGGCAGCTaGTTGCGGATGTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATDSLGS*LRMSSP
Trigger: AGGAGAAGACATCCGCAAGCAGCTGCCCAATGAATC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTTGGGAAACAGATCTTaGACGATGGCATTGAACAGG +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWLGNRS*TMALNR
Trigger: CCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGCCTGGTCTATGATATaGGACTGGATCTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGAWSMI*DWISSN
Trigger: ATTTGAAGAGATCCAGTCGCATATCATAGACCAGGC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTCCAACGACATCACTTaGACCTTTTCCCTAGTTTCG +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWSNDIT*TFSLVS
Trigger: CGAAACTAGGGAAAAGGTGCAAGTGATGTCGTTGGA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTATCCCAGTAGGCATCTaGAAGCCAGCTACTACATGG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIIPVGI*KPATTW
Trigger: CCATGTAGTAGCTGGCTTGCAGATGCCTACTGGGAT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAACGATCAGCATCCGTTaGATTTCATTGCAGGCATTT +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQTISIR*ISLQAF
Trigger: AAATGCCTGCAATGAAATGCAACGGATGCTGATCGT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGCTGCAGGAACTTTTTaGGTTCAAGTAACACAGAGT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGAAGTF*VQVTQS
Trigger: ACTCTGTGTTACTTGAACGCAAAAAGTTCCTGCAGC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGATGTTCCAGCCAAGCTaGAGGAACTTTTTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRMFQPS*RNFLRS
Trigger: TGAACGCAAAAAGTTCCTGCAGCTTGGCTGGAACAT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGAAGGATTTGTACTTTaGTCCAAGGAAAAACGTTCT +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSEGFVL*SKEKRS
Trigger: AGAACGTTTTTCCTTGGAGCAAAGTACAAATCCTTC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATCTTCTCAGCTTTGCTaGACATCGTGCAGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITSSQLC*TSCRQN
Trigger: GTTTTGCCTGCACGATGTCCAGCAAAGCTGAGAAGA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACCAGGTGATGGGAACTaGTGCTTGGCGAATGAAGTA +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATPGDGN*CLANEV
Trigger: TACTTCATTCGCCAAGCACCAGTTCCCATCACCTGG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTCCAGGTGATGGGAACTaGTGCTTGGCGAATGAAGTA +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFPGDGN*CLANEV
Trigger: TACTTCATTCGCCAAGCACCAGTTCCCATCACCTGG...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTGGCAAGGTGCAGGATaGATTCAACGTGCTTCACTC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIWQGAG*IQRASL
Trigger: GAGTGAAGCACGTTGAATCCATCCTGCACCTTGCCA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGAACCAGCTCATCAATaGCCTGGACCATCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIEPAHQ*PGPSAD
Trigger: ATCAGCAGATGGTCCAGGCCATTGATGAGCTGGTTC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTTCTTGAGTCCCGGGTaGATCTTCTTATCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIFLSPG*IFLSRS
Trigger: GCTCCTGGATAAGAAGATCCACCCGGGACTCAAGAA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGATGGTCACCACATCCTaGTGCAGGTTCATCAATTTC +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWMVTTS*CRFINF
Trigger: GAAATTGATGAACCTGCACCAGGATGTGGTGACCAT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGATGGTGGAAAAGAGGTaGTTGCCAATGTCATTGACC +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRMVEKR*LPMSLT
Trigger: GGTCAATGACATTGGCAACCACCTCTTTTCCACCAT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTACGTTGCTGGTGAAATaGCCTTTGAATTCGAAATCT +
Preference number: 4 (lower is better)
Translates to: TQLGISRATSHKFGQGQSTLLVK*PLNSKS
Trigger: AGATTTCGAATTCAAAGGCCATTTCACCAGCAACGT...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCGCACTTGTGTAATCTaGTCTAAGGCAGACATGTAT +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLRTCVI*SKADMY
Trigger: ATACATGTCTGCCTTAGACCAGATTACACAAGTGCG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGGCCCTCCAACCTTCTaGATTCTCAGCAACTTGATG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIGPPTF*ILSNLM
Trigger: CATCAAGTTGCTGAGAATCCAGAAGGTTGGAGGGCC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTCTAAAAATACTGAGTaGAGGAAGTCAATGTACTCG +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSSKNTE*RKSMYS
Trigger: CGAGTACATTGACTTCCTCCACTCAGTATTTTTAGA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATTCAGGATTGACACCTaGTTCTTCTTCATGACCTTG +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQFRIDT*FFFMTL
Trigger: CAAGGTCATGAAGAAGAACCAGGTGTCAATCCTGAA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GTTACCCAAGTACTCATAATTATACTGAAATTGCGTGTTGGTCTGGCGGATGACCACCACCATGGCAATTaGGCGGAACATGGATTTAAG +
Preference number: 4 (lower is better)
Translates to: VTQVLIIILKLRVGLADDHHHGN*AEHGFK
Trigger: CTTAAATCCATGTTCCGCCCAATTGCCATGGTGGTG...GTCATCCGCCAGACCAACACGCAATTTCAGTATAATTATGAGTACTTGGGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAAGTGGCGGGAGTTCTTaGTTTCATACAACTGGAAAA +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQSGGSS*FHTTGK
Trigger: TTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACCACGTTCCCAATaGGCTTCACCTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATSPRSQ*ASPLPQ
Trigger: TTGAGGAAGAGGTGAAGCCCATTGGGAACGTGGTGA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGATAGTGACAAAGATCTaGGCCACCTTCCTGTGGATA +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWIVTKI*ATFLWI
Trigger: TATCCACAGGAAGGTGGCCCAGATCTTTGTCACTAT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCCTCACACTGCTTCTaGAACTCAGCCACCTTCTTC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATSSHCF*NSATFF
Trigger: GAAGAAGGTGGCTGAGTTCCAGAAGCAGTGTGAGGA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGTGAGAACTGGTACATaGGGTCGATGCAGCCCATAT +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIVRTGT*GRCSPY
Trigger: ATATGGGCTGCATCGACCCCATGTACCAGTTCTCAC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTGAATAGTAGTTTGTaGCGTTCGAAAAGGGTACGG +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRLNSSL*RSKRVR
Trigger: CCGTACCCTTTTCGAACGCCACAAACTACTATTCAG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGAGTTCATGAGTCCGTaGAAGTTGGTCAGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWEFMSP*KLVSLS
Trigger: AGACAAACTGACCAACTTCCACGGACTCATGAACTC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGCAGCTTCTTATATTTaGCAGGTTTGGAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIAASYI*QVWSSG
Trigger: CCCGCTGCTCCAAACCTGCCAAATATAAGAAGCTGC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAAGTGCTGACAACCGGTaGAAGGGAGTTGATAGAGAC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATSADNR*KGVDRD
Trigger: GTCTCTATCAACTCCCTTCCACCGGTTGTCAGCACT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTGAACAGCGACATCACTaGTTTAGTCAGATAGTGGAG +
Preference number: 4 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLIEQRHH*FSQIVE
Trigger: CTCCACTATCTGACTAAACCAGTGATGTCGCTGTTC...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTGTGTGCAGATTTTTATaGAAGATGTCCTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLVCRFL*KMSSIS
Trigger: GGAGATTGAGGACATCTTTCATAAAAATCTGCACAC...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR TCA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTGGGCCAGCTCGCTATTaGACAGCATGTAGAGATCCA +
Preference number: 4 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFGPARY*TACRDP
Trigger: TGGATCTCTACATGCTGTTCAATAGCGAGCTGGCCC...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTATCCTTGTCCAGACTTaGTGTCCACTCTTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFILVQT*CPLLEG
Trigger: ACCTTCCAAGAGTGGACATCAAGTCTGGACAAGGAT...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTCAGAGTGGATGCCTTaGACTCATTCACAATCATCT +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWSEWMP*THSQSS
Trigger: AGATGATTGTGAATGAGTTCAAGGCATCCACTCTGA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACAGGACCATCATTCTTaGAGACCTCATAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATQDHHS*RPHRSW
Trigger: CCAACTCCTATGAGGTCTTCAAGAATGATGGTCCTG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCAGGACCATCATTCTTaGAGACCTCATAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIQDHHS*RPHRSW
Trigger: CCAACTCCTATGAGGTCTTCAAGAATGATGGTCCTG...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAAAGCTTTCAGATTCCTaGTCAAACTCCCGCTGGATC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATKLSDS*SNSRWI
Trigger: GATCCAGCGGGAGTTTGATCAGGAATCTGAAAGCTT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTCTAAGTACATCCACTaGCGCTGCACTGTGAGAATC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQISKYIH*RCTVRI
Trigger: GATTCTCACAGTGCAGCGTCAGTGGATGTACTTAGA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGATTCTCAGCAACTTaGTGTTGTCAAAGCATTTTT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSGFSAT*CCQSIF
Trigger: AAAAATGCTTTGACAACATCAAGTTGCTGAGAATCC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TCTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCATACTTATTCAGGATTaGCACCTGGTTCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SKNTEWRKSMYSPSPENIILIQD*HLVLLH
Trigger: ATGAAGAAGAACCAGGTGTCAATCCTGAATAAGTAT...GATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCAGACCAGATCATGCTaGACACAAATGTCATCTCTA +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRQTRSC*TQMSSL
Trigger: TAGAGATGACATTTGTGTTCAGCATGATCTGGTCTG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATTTCTCGAATGTACTTaGTGGTCTGCTTCGTACGGT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITFLECT*WSASYG
Trigger: ACCGTACGAAGCAGACCATCAAGTACATTCGAGAAA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCCTGAAGCTTCTGATTaGTCATGGTGCCGAATATGC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIPEASD*SWCRIC
Trigger: GCATATTCGGCACCATGATCAATCAGAAGCTTCAGG...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAACTCTGAGAACCAGTTaGTGGTTGTGCAGTTCACCA +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATTLRTS*WLCSSP
Trigger: TGGTGAACTGCACAACCATCAACTGGTTCTCAGAGT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGGAATACTGAGCTACTaGCCAGTGCATAGTGACAAA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITGILSY*PVHSDK
Trigger: TTTGTCACTATGCACTGGTCAGTAGCTCAGTATTCC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTGGAGAGCTTGGTGGTaGTGTAGAAACGGAAATTGG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIWRAWW*CRNGNW
Trigger: CCAATTTCCGTTTCTACATCACCACCAAGCTCTCCA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCACACATATGAAAACTaGATAGTAGTTTGTGGCGTT +
Preference number: 4 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSHTYEN*IVVCGV
Trigger: AACGCCACAAACTACTATTCAGTTTTCATATGTGTG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCATCAAAGATGCAATTaGAAATCTCTTCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGHQRCN*KSLPGL
Trigger: CAAGCCTGGAAGAGATTTTCAATTGCATCTTTGATG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTCATGTTCATGGCCTCTaGAGGGATGTAGAGGACCGT +
Preference number: 4 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFHVHGL*RDVEDR
Trigger: ACGGTCCTCTACATCCCTGCAGAGGCCATGAACATG...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTAGGATGGATTCAACGTaGTTCACTCCCTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFRMDST*FTPFFT
Trigger: GGTGAAGAAGGGAGTGAAGCACGTTGAATCCATCCT...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGAGCCATCCTGGATCTaGTGTGCCAGTTTCATAAAG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIEPSWI*CASFIK
Trigger: CTTTATGAAACTGGCACAGCAGATCCAGGATGGCTC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGAGCCATCCTGGATCTaGTGTGCCAGTTTCATAAAG +
Preference number: 4 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFEPSWI*CASFIK
Trigger: CTTTATGAAACTGGCACAGCAGATCCAGGATGGCTC...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACAATCATCTGCACCTTaGTGGCATGTATACGGCACT +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATQSSAP*WHVYGT
Trigger: AGTGCCGTATACATGCCAGCAAGGTGCAGATGATTG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACCAAGCTCCACAATCTaGTCCAAGGTGAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATPSSTI*SKVKLS
Trigger: TGAAAGCTTCACCTTGGAGCAGATTGTGGAGCTTGG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGAAAGAGAATGATTTCTaGAATGAGGGTGGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWKENDF*NEGGVR
Trigger: CCTGACTCCACCCTCATTGCAGAAATCATTCTCTTT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTATTGGATGTGGTCTGTaGGGACATGTTGACAACGAG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIIGCGL*GHVDNE
Trigger: CTCGTTGTCAACATGTCCGCACAGACCACATCCAAT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAATGTACTTGATGGTCTaGTTCGTACGGTCATACCAG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITMYLMV*FVRSYQ
Trigger: CTGGTATGACCGTACGAAGCAGACCATCAAGTACAT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCTTGATTTCCTCAACTaGAATCTTTTCACTGTTGGC +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGLDFLN*NLFTVG
Trigger: GCCAACAGTGAAAAGATTGCAGTTGAGGAAATCAAG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTCGAAGAATCATAACTaGCTGCATCACTATCTCCAC +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWSKNHN*LHHYLH
Trigger: GTGGAGATAGTGATGCAGGCAGTTATGATTCTTCGA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAATCAAAGAGGGTTTGTaGCTCAGTGATCTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATIKEGL*LSDLRG
Trigger: GCCTCTCAGATCACTGAGGCACAAACCCTCTTTGAT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAATTTCAGGGATCTTCTaGTTCACATCAGCGGCCAAC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATISGIF*FTSAAN
Trigger: GTTGGCCGCTGATGTGAAGCAGAAGATCCCTGAAAT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATATCTCTGGATCTCCTaGAGAAGGACCACATTGAGG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATYLWIS*RRTTLR
Trigger: CCTCAATGTGGTCCTTCTGCAGGAGATCCAGAGATA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTAGAGAAGCATCAAGCTaGGCTTTCCTGCCTCAAACT +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIREASS*AFLPQT
Trigger: AGTTTGAGGCAGGAAAGCGCAGCTTGATGCTTCTCT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCTTCTCAGCTTTGCTaGACATCGTGCAGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATSSQLC*TSCRQN
Trigger: GTTTTGCCTGCACGATGTCCAGCAAAGCTGAGAAGA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAAGAAGACAGAGATGGTaGAAAAGAGGTGGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITRRQRW*KRGGCQ
Trigger: TTGGCAACCACCTCTTTTCCACCATCTCTGTCTTCT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACTGCTGATTTGGGTCTaGATCTTCTTGATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITLLIWV*IFLMSS
Trigger: TGAGGACATCAAGAAGATCCAGACCCAAATCAGCAG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GTTACCCAAGTACTCATAATTATACTGAAATTGCGTGTTGGTCTGGCGGATGACCTGCTGATTTGGGTCTaGATCTTCTTGATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VTQVLIIILKLRVGLADDLLIWV*IFLMSS
Trigger: TGAGGACATCAAGAAGATCCAGACCCAAATCAGCAG...GTCATCCGCCAGACCAACACGCAATTTCAGTATAATTATGAGTACTTGGGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCGTACTTTTCAAGAATaGCAAATTGCTCGTGTATGG +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLRTFQE*QIARVW
Trigger: CCATACACGAGCAATTTGCCATTCTTGAAAAGTACG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CCA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCACGTTGCTGGTGAAATaGCCTTTGAATTCGAAATCT +
Preference number: 4 (lower is better)
Translates to: LLWLTQLGISRATSHKFGTLLVK*PLNSKS
Trigger: AGATTTCGAATTCAAAGGCCATTTCACCAGCAACGT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCAGTTGCTGTTGACCTaGTCAAATAAGGTCGATTCA +
Preference number: 4 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWQLLLT*SNKVDS
Trigger: TGAATCGACCTTATTTGACCAGGTCAACAGCAACTG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACCCCTCTTTATTTCCAGACCCCTCTTAGGTACGTGCATTTGTCCCTTCTCTCATCTAAAAATACTGAGTaGAGGAAGTCAATGTACTCG +
Preference number: 4 (lower is better)
Translates to: TPLYFQTPLRYVHLSLLSSKNTE*RKSMYS
Trigger: CGAGTACATTGACTTCCTCCACTCAGTATTTTTAGA...TGAGAGAAGGGACAAATGCACGTACCTAAGAGGGGTCTGGAAATAAAGAGGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACTGGACTTGGTATCATaGAAGTCCTTGTTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITLDLVS*KSLLAL
Trigger: TAGAGCCAACAAGGACTTCCATGATACCAAGTCCAG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAACTCTGAAACATTCATaGATCCAGAGCCGTGTGATG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITTLKHS*IQSRVM
Trigger: CATCACACGGCTCTGGATCCATGAATGTTTCAGAGT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTCTATGATATGCGACTaGATCTCTTCAAATTCATCA +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLSMICD*ISSNSS
Trigger: TGATGAATTTGAAGAGATCCAGTCGCATATCATAGA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTGTAGAAACGGAAATTaGTATTATATTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: QLGISRATSHKFGQGQSLCRNGN*YYIPPP
Trigger: AGGAGGTGGAATATAATACCAATTTCCGTTTCTACA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTAAGCCAGCTACTACATaGATTGTCCATTTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIKPATT*IVHLAL
Trigger: GAGGGCCAAATGGACAATCCATGTAGTAGCTGGCTT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTAAAGACGTGTCATGTTaGCCTTTAGGCCCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIKDVSC*PLGPLV
Trigger: CACCAAAGGGCCTAAAGGCCAACATGACACGTCTTT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGACTCTTTCACTTTTATaGCTAACACAACTAGGTATC +
Preference number: 4 (lower is better)
Translates to: TRYLQGHITQIRPRSKSETLSLL*LTQLGI
Trigger: GATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTACTCTTTCACTTTTATaGCTAACACAACTAGGTATC +
Preference number: 4 (lower is better)
Translates to: LGISRATSHKFGQGQSLSTLSLL*LTQLGI
Trigger: GATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
3UTR CAA 72 bp ACACAGTGCTTACAACAGAGGGTGTTTTTCTTATCATaGTTCTCAACAGCCGCGGCAAGCAAAGCATTTTTC +
Preference number: 4 (lower is better)
Translates to: TQCLQQRVFFLS*FSTAAASKAFF
Trigger: GAAAAATGCTTTGCTTGCCGCGGCTGTTGAGAACAATGATAAGAAAAACACCCTCTGTTGTAAGCACTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR TCA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTGTGTGCAGATTTTTATaGAAGATGTCCTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLIVCRFL*KMSSIS
Trigger: GGAGATTGAGGACATCTTTCATAAAAATCTGCACAC...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACAATCTGCTCCAAGGTaGAGCTTTCAGATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATQSAPR*SFQIPD
Trigger: ATCAGGAATCTGAAAGCTTCACCTTGGAGCAGATTG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGATTCTCAGCAACTTaGTGTTGTCAAAGCATTTTT +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQGFSAT*CCQSIF
Trigger: AAAAATGCTTTGACAACATCAAGTTGCTGAGAATCC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAATACTTATTCAGGATTaGCACCTGGTTCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LWLTQLGISRATSHKFGQILIQD*HLVLLH
Trigger: ATGAAGAAGAACCAGGTGTCAATCCTGAATAAGTAT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTCCATTCATTGGTGCTaGGGTCATATTCCCCATACA +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQISIHWC*GHIPHT
Trigger: TGTATGGGGAATATGACCTCAGCACCAATGAATGGA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAGACCAGATCATGCTaGACACAAATGTCATCTCTA +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITQTRSC*TQMSSL
Trigger: TAGAGATGACATTTGTGTTCAGCATGATCTGGTCTG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGGAATACTGAGCTACTaGCCAGTGCATAGTGACAAA +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIGILSY*PVHSDK
Trigger: TTTGTCACTATGCACTGGTCAGTAGCTCAGTATTCC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGCCGTCCATAAGACTTaGTCTCTCCTATATCCTTCT +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATAVHKT*SLLYPS
Trigger: AGAAGGATATAGGAGAGATCAAGTCTTATGGACGGC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGGTGTTTTACAGCACTaGGCTCCAATACAACTCTTT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITGVLQH*APIQLF
Trigger: AAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTGCTTCTTCTCAGCTTTaGTGGACATCGTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFASSQL*WTSCRQ
Trigger: TTGCCTGCACGATGTCCAGCAAAGCTGAGAAGAAGC...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAATGTACTTGATGGTCTaGTTCGTACGGTCATACCAG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATMYLMV*FVRSYQ
Trigger: CTGGTATGACCGTACGAAGCAGACCATCAAGTACAT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTCCGTTGCATTTCATTaGAGGCATTTTCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQISVAFH*RHFPTH
Trigger: GTGAGTGGGAAAATGCCTGCAATGAAATGCAACGGA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGCTGCAGGAACTTTTTaGGTTCAAGTAACACAGAGT +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITAAGTF*VQVTQS
Trigger: ACTCTGTGTTACTTGAACGCAAAAAGTTCCTGCAGC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGAGAACAGGATGGTCTaGATCAGTGTGTTGTATCTC +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIENRMV*ISVLYL
Trigger: GAGATACAACACACTGATGCAGACCATCCTGTTCTC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTCAACCTGAGCAAAGATaGTGGTCTGATCTAGGACCC +
Preference number: 4 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFQPEQR*WSDLGP
Trigger: GGGTCCTAGATCAGACCAGCATCTTTGCTCAGGTTG...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTTGGCAAGGTGCAGGATaGATTCAACGTGCTTCACTC +
Preference number: 4 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFWQGAG*IQRASL
Trigger: GAGTGAAGCACGTTGAATCCATCCTGCACCTTGCCA...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTCCAAGTAGGACGACTTaGCAAGGTGCAGGATGGATT +
Preference number: 4 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFPSRTT*QGAGWI
Trigger: AATCCATCCTGCACCTTGCCAAGTCGTCCTACTTGG...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAAAAATGACAAGGACTTaGAAGAGTGGGTTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATKMTRT*KSGFGL
Trigger: CAGCCCAAACCCACTCTTCCAAGTCCTTGTCATTTT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTTATCTTCCAGTGCCTaGAATACTTCTTCTGTACCT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRLSSSA*NTSSVP
Trigger: AGGTACAGAAGAAGTATTCCAGGCACTGGAAGATAA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTACTCTGAAACATTCATaGATCCAGAGCCGTGTGATG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQITLKHS*IQSRVM
Trigger: CATCACACGGCTCTGGATCCATGAATGTTTCAGAGT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTATATTTGGCAGGTTTaGAGCAGCGGGAAAACTGTG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIYIWQV*SSGKTV
Trigger: CACAGTTTTCCCGCTGCTCCAAACCTGCCAAATATA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTGGTATCCTTAAACTaGTTACCAGCAGGCAAATTT +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRLVSLN*LPAGKF
Trigger: AAATTTGCCTGCTGGTAACCAGTTTAAGGATACCAG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR TCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTGCCAGGCAATAAGCTaGTGTATTCCTTGTAAGAAG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQICQAIS*CIPCKK
Trigger: CTTCTTACAAGGAATACATCAGCTTATTGCCTGGCA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATGTGCCACACTTCCTTaGAGATCATTCTTCAAAATG +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITCATLP*RSFFKM
Trigger: CATTTTGAAGAATGATCTGCAAGGAAGTGTGGCACA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTAGAATCATAACTGCCTaGATCACTATCTCCACTTGG +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQIRIITA*ITISTW
Trigger: CCAAGTGGAGATAGTGATGCAGGCAGTTATGATTCT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAATCTTGATGCTGACCTaGAAGATTGAGATAGGGAAG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATILMLT*KIEIGK
Trigger: CTTCCCTATCTCAATCTTGCAGGTCAGCATCAAGAT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACAGTTGCTGTTGACCTaGTCAAATAAGGTCGATTCA +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATQLLLT*SNKVDS
Trigger: TGAATCGACCTTATTTGACCAGGTCAACAGCAACTG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTCTAAAAATACTGAGTaGAGGAAGTCAATGTACTCG +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRSKNTE*RKSMYS
Trigger: CGAGTACATTGACTTCCTCCACTCAGTATTTTTAGA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTGTAGAAACGGAAATTaGTATTATATTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLCRNGN*YYIPPP
Trigger: AGGAGGTGGAATATAATACCAATTTCCGTTTCTACA...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR TCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGATCATTCTTCAAAATaGCAAGGACTTGGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATDHSSK*QGLGRV
Trigger: CACTCTTCCAAGTCCTTGTCATTTTGAAGAATGATC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAAATGGTCAGAGTGGATaGCTTGAACTCATTCACAAT +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATNGQSG*LELIHN
Trigger: ATTGTGAATGAGTTCAAGGCATCCACTCTGACCATT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR GCA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATTCCAGAAGTGTATGTaGTTTCTTCTTGAAGTCATC +
Preference number: 4 (lower is better)
Translates to: NSFTFMANTTRYLQGHITFQKCM*FLLEVI
Trigger: GATGACTTCAAGAAGAAAGCACATACACTTCTGGAA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTCTTGATGTCCACTCTTaGAAGGTTTTTCGAACCAGC +
Preference number: 4 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFLDVHS*KVFRTS
Trigger: GCTGGTTCGAAAAACCTTCCAAGAGTGGACATCAAG...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CCA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACGTACTTTTCAAGAATaGCAAATTGCTCGTGTATGG +
Preference number: 4 (lower is better)
Translates to: NTTLSLLWLTQLGISRATRTFQE*QIARVW
Trigger: CCATACACGAGCAATTTGCCATTCTTGAAAAGTACG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CCA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTCTATGATATGCGACTaGATCTCTTCAAATTCATCA +
Preference number: 4 (lower is better)
Translates to: TFMANTTRYLQGHITQIRSMICD*ISSNSS
Trigger: TGATGAATTTGAAGAGATCCAGTCGCATATCATAGA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR TCA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTTTTGATTTTTGTTTTTaGGGCAGGGTCACTCTGTCG +
Preference number: 4 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFFDFCF*GRVTLS
Trigger: CGACAGAGTGACCCTGCCTCAAAAACAAAAATCAAA...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
39% GC, longest homopolymer 8 nt, total homopolymer stretches 28 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR GCA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTTATTTGACTCAAAATaGCCTGAGAACAGATTGGAA +
Preference number: 4 (lower is better)
Translates to: FTFMANTTRYLQGHITQILFDSK*PENRLE
Trigger: TTCCAATCTGTTCTCAGGGCATTTTGAGTCAAATAA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572933.5
3UTR CAA 72 bp AATACATATCCAGAGATTTCTGAATATCTTCCAGGATaGTATTCATTTCTATCAATGTGTCCAGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: NTYPEISEYLPG*YSFLSMCPGGL
Trigger: CAGGCCTCCTGGACACATTGATAGAAATGAATACAATCCTGGAAGATATTCAGAAATCTCTGGATATGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS GCA 90 bp CCCGGGAAGGCGGGTTCCCTCCGGTCACTCATCCCAGAGGAAAGCTaGACCCCGCTGCGGGAGTCACACTCCCGGGGACGCCGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: PGKAGSLRSLIPEES*TPLRESHSRGRRSQ
Trigger: CTGGCTTCGGCGTCCCCGGGAGTGTGACTCCCGCAGCGGGGTGCAGCTTTCCTCTGGGATGAGTGACCGGAGGGAACCCGCCTTCCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575498.1
CDS CCA 90 bp CAGCCGGGGCATTCCCCTGCTCCTGTGTGGCCACAGCAGCCCGAGTaGCCCGCCCTGACCAGCTTGCCTGGGAGCTTCCTCGGCCACTCA +
Preference number: 5 (lower is better)
Translates to: QPGHSPAPVWPQQPE*PALTSLPGSFLGHS
Trigger: TGAGTGGCCGAGGAAGCTCCCAGGCAAGCTGGTCAGGGCGGGCCACTCGGGCTGCTGTGGCCACACAGGAGCAGGGGAATGCCCCGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 90 bp AGCTCAGCCTGCAGCTCTGGCTCACTGACAGCCGGGGCATTCCCCTaGTCCTGTGTGGCCACAGCAGCCCGAGTGGCCCGCCCTGACCAG +
Preference number: 5 (lower is better)
Translates to: SSACSSGSLTAGAFP*SCVATAARVARPDQ
Trigger: CTGGTCAGGGCGGGCCACTCGGGCTGCTGTGGCCACACAGGAGCAGGGGAATGCCCCGGCTGTCAGTGAGCCAGAGCTGCAGGCTGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 90 bp CAGAAGATCACAGGAGGCCGGGCCCGGCTGGCCCACAGCTCAAACTaGTCCACACGCATGGCCAAGTCCCGGGTCCAGGCAGCCAATGGC +
Preference number: 5 (lower is better)
Translates to: QKITGGRARLAHSSN*STRMAKSRVQAANG
Trigger: GCCATTGGCTGCCTGGACCCGGGACTTGGCCATGCGTGTGGAGCAGTTTGAGCTGTGGGCCAGCCGGGCCCGGCCTCCTGTGATCTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp GAGGCCGGGCCCGGCTGGCCCACAGCTCAAACTGCTCCACACGCATaGCCAAGTCCCGGGTCCAGGCAGCCAATGGCTTTTGTGAGGGGT +
Preference number: 5 (lower is better)
Translates to: EAGPGWPTAQTAPHA*PSPGSRQPMAFVRG
Trigger: ACCCCTCACAAAAGCCATTGGCTGCCTGGACCCGGGACTTGGCCATGCGTGTGGAGCAGTTTGAGCTGTGGGCCAGCCGGGCCCGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 90 bp ATTCCCCTGCTCCTGTGTGGCCACAGCAGCCCGAGTGGCCCGCCCTaGCCAGCTTGCCTGGGAGCTTCCTCGGCCACTCAATCGCTGCTT +
Preference number: 5 (lower is better)
Translates to: IPLLLCGHSSPSGPP*PACLGASSATQSLL
Trigger: AAGCAGCGATTGAGTGGCCGAGGAAGCTCCCAGGCAAGCTGGTCAGGGCGGGCCACTCGGGCTGCTGTGGCCACACAGGAGCAGGGGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 90 bp CCGACCACTGGCTGGAGGGCAGGGACTGCAGAACGCTCTGGGCGATaGAGGTCTTCCCAGTCCCCACGGGACCCACCAGCAGAATGGGAT +
Preference number: 5 (lower is better)
Translates to: PTTGWRAGTAERSGR*RSSQSPRDPPAEWD
Trigger: ATCCCATTCTGCTGGTGGGTCCCGTGGGGACTGGGAAGACCTCCATCGCCCAGAGCGTTCTGCAGTCCCTGCCCTCCAGCCAGTGGTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 90 bp TCGCGGGAGGCAAGCCTGTGGAAGGTGTCCAGCAGAAGCACGCCGTaGGGCACGTCCCGCACCAACTCGAAGGCTGAGGTGATCAGGTTC +
Preference number: 5 (lower is better)
Translates to: SREASLWKVSSRSTP*GTSRTNSKAEVIRF
Trigger: GAACCTGATCACCTCAGCCTTCGAGTTGGTGCGGGACGTGCCGCACGGCGTGCTTCTGCTGGACACCTTCCACAGGCTTGCCTCCCGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 90 bp GCTGCGCTTTCCTGCCTCAAACTAGAGCCTGAGGCGCATGCACCGTaGGGTTCACCACGCGATCCCACACCGCAGGCCCCAGGAGGAACT +
Preference number: 5 (lower is better)
Translates to: AALSCLKLEPEAHAP*GSPRDPTPQAPGGT
Trigger: AGTTCCTCCTGGGGCCTGCGGTGTGGGATCGCGTGGTGAACCCCACGGTGCATGCGCCTCAGGCTCTAGTTTGAGGCAGGAAAGCGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS TCA 90 bp AGCTTCTCCTGGGCCTCAGCGAGCGCGGCTTGCTTCTCCCGAAGCTaGGCCAAGGCAGCGTTCATTCGGATTCGCTTGGGCTCCACCACC +
Preference number: 5 (lower is better)
Translates to: SFSWASASAACFSRS*AKAAFIRIRLGSTT
Trigger: GGTGGTGGAGCCCAAGCGAATCCGAATGAACGCTGCCTTGGCTCAGCTTCGGGAGAAGCAAGCCGCGCTCGCTGAGGCCCAGGAGAAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS GCA 90 bp GACATGTTGACAACGAGCACCGACCACTGGCTGGAGGGCAGGGACTaGAGAACGCTCTGGGCGATGGAGGTCTTCCCAGTCCCCACGGGA +
Preference number: 5 (lower is better)
Translates to: DMLTTSTDHWLEGRD*RTLWAMEVFPVPTG
Trigger: TCCCGTGGGGACTGGGAAGACCTCCATCGCCCAGAGCGTTCTGCAGTCCCTGCCCTCCAGCCAGTGGTCGGTGCTCGTTGTCAACATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp TGTGTGGCCACAGCAGCCCGAGTGGCCCGCCCTGACCAGCTTGCCTaGGAGCTTCCTCGGCCACTCAATCGCTGCTTCTTCTCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: CVATAARVARPDQLA*ELPRPLNRCFFSAL
Trigger: CAAAGCTGAGAAGAAGCAGCGATTGAGTGGCCGAGGAAGCTCCCAGGCAAGCTGGTCAGGGCGGGCCACTCGGGCTGCTGTGGCCACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 90 bp CTCTCTGCAGGCCGGAAGTGGATCGTGGGCATGAGGCAGACAAGCTaGATGGGCTCTGCCTCCACCAAGCAGGAGTTCTTCCGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: LSAGRKWIVGMRQTS*MGSASTKQEFFRSQ
Trigger: CTGGGACCGGAAGAACTCCTGCTTGGTGGAGGCAGAGCCCATGCAGCTTGTCTGCCTCATGCCCACGATCCACTTCCGGCCTGCAGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 90 bp CAGCAGAAGCACGCCGTGCGGCACGTCCCGCACCAACTCGAAGGCTaGGGTGATCAGGTTCTGGGTCATCACCTCCAGGTCCTTGATTCC +
Preference number: 5 (lower is better)
Translates to: QQKHAVRHVPHQLEG*GDQVLGHHLQVLDS
Trigger: GGAATCAAGGACCTGGAGGTGATGACCCAGAACCTGATCACCTCAGCCTTCGAGTTGGTGCGGGACGTGCCGCACGGCGTGCTTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS TCA 90 bp CATTCTCTGGCGTGGCCAGGGCAGAGTACAGCTTGCAGAGGGAGGTaGTACCGCTGTACTCGGGCAGGGGCACCAGCTCCTTGCAGTTGT +
Preference number: 5 (lower is better)
Translates to: HSLAWPGQSTACRGR*YRCTRAGAPAPCSC
Trigger: ACAACTGCAAGGAGCTGGTGCCCCTGCCCGAGTACAGCGGTATCACCTCCCTCTGCAAGCTGTACTCTGCCCTGGCCACGCCAGAGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 90 bp ATGTTTGGTGACCTCGATCTGGAAGGTGGTGTAGTCGCAGATGGATaGAGCCAGGCGGGCCAGACTCTGGCGTCCGCTGCCCCCGATACC +
Preference number: 5 (lower is better)
Translates to: MFGDLDLEGGVVADG*SQAGQTLASAAPDT
Trigger: GGTATCGGGGGCAGCGGACGCCAGAGTCTGGCCCGCCTGGCTTCATCCATCTGCGACTACACCACCTTCCAGATCGAGGTCACCAAACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 90 bp GGCCCCAGACCGCAGGTCAATGCCGATGACAAAGGAGGCTCGGTCTaGGCTGCCTGCCCGGTTGGGATAGTAATAGCAGGGGCAGGAGTA +
Preference number: 5 (lower is better)
Translates to: GPRPQVNADDKGGSV*AACPVGIVIAGAGV
Trigger: TACTCCTGCCCCTGCTATTACTATCCCAACCGGGCAGGCAGCTCAGACCGAGCCTCCTTTGTCATCGGCATTGACCTGCGGTCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 90 bp AGTCCGCTTGATAGCCTAGGGAAGAAGAGGAAGAGGCTGGCGACGTaGCCGGGAAGGCGGGTTCCCTCCGGTCACTCATCCCAGAGGAAA +
Preference number: 5 (lower is better)
Translates to: SPLDSLGKKRKRLAT*PGRRVPSGHSSQRK
Trigger: TTTCCTCTGGGATGAGTGACCGGAGGGAACCCGCCTTCCCGGGCACGTCGCCAGCCTCTTCCTCTTCTTCCCTAGGCTATCAAGCGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575498.1
CDS CCA 90 bp GGGCGATGGAGGTCTTCCCAGTCCCCACGGGACCCACCAGCAGAATaGGATTCTGGTTGGCCACCAAGCTGCTCACCAGGTAGTTGTAGC +
Preference number: 5 (lower is better)
Translates to: GRWRSSQSPRDPPAE*DSGWPPSCSPGSCS
Trigger: GCTACAACTACCTGGTGAGCAGCTTGGTGGCCAACCAGAATCCCATTCTGCTGGTGGGTCCCGTGGGGACTGGGAAGACCTCCATCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp TTGGATGTGGTCTGTGCGGACATGTTGACAACGAGCACCGACCACTaGCTGGAGGGCAGGGACTGCAGAACGCTCTGGGCGATGGAGGTC +
Preference number: 5 (lower is better)
Translates to: LDVVCADMLTTSTDH*LEGRDCRTLWAMEV
Trigger: GACCTCCATCGCCCAGAGCGTTCTGCAGTCCCTGCCCTCCAGCCAGTGGTCGGTGCTCGTTGTCAACATGTCCGCACAGACCACATCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp GCTTCTCCCGAAGCTGAGCCAAGGCAGCGTTCATTCGGATTCGCTTaGGCTCCACCACCCGATATAGCCGCCCATACAGCTCCATGGCCC +
Preference number: 5 (lower is better)
Translates to: ASPEAEPRQRSFGFA*APPPDIAAHTAPWP
Trigger: GGGCCATGGAGCTGTATGGGCGGCTATATCGGGTGGTGGAGCCCAAGCGAATCCGAATGAACGCTGCCTTGGCTCAGCTTCGGGAGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 90 bp GGGCACGAGGAAGGTCACAGTGGTGCCTCTCTCAGAAAGGTAGGATaGCAGGAAGCGGGGATCTCGGACAGGTGCTCAGAATCCCAGGCG +
Preference number: 5 (lower is better)
Translates to: GHEEGHSGASLRKVG*QEAGISDRCSESQA
Trigger: CGCCTGGGATTCTGAGCACCTGTCCGAGATCCCCGCTTCCTGCCATCCTACCTTTCTGAGAGAGGCACCACTGTGACCTTCCTCGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCCCGCTGGATCTCATCCCGGACCTGGTCCCAGTGCCTCTCTCTAAGGGCAGCGATGCGCTCGCCGTaGATGAGGGTCAACACCTTG +
Preference number: 5 (lower is better)
Translates to: NSRWISSRTWSQCLSLRAAMRSP*MRVNTL
Trigger: CAAGGTGTTGACCCTCATCAACGGCGAGCGCATCGC...TGCCCTTAGAGAGAGGCACTGGGACCAGGTCCGGGATGAGATCCAGCGGGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS TCA 90 bp GGCTTCACATCTGCCTCGGGCTCCACTGATTCTTCACTCTGTGCTTaGGGTCCCTCCAACCGTGGCTCAGGCTCCTCCTTGGGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: GFTSASGSTDSSLCA*GPSNRGSGSSLGSS
Trigger: TGAGCTCCCCAAGGAGGAGCCTGAGCCACGGTTGGAGGGACCTCAAGCACAGAGTGAAGAATCAGTGGAGCCCGAGGCAGATGTGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 90 bp AGGCGACGAAACAGCCCGTGGGCCGTGGTCTCCATGGTTTCCGTCTaGAGGATCAGGAACCGGCCAGTCTTCCACTCATTCCAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: RRRNSPWAVVSMVSV*RIRNRPVFHSFQFS
Trigger: GGAGAACTGGAATGAGTGGAAGACTGGCCGGTTCCTGATCCTGCAGACGGAAACCATGGAGACCACGGCCCACGGGCTGTTTCGTCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS GCA 90 bp AGTGTAGACCATCCCGCAGCGGGATACAGTGGCCGGAGAGGCCATTaGCAGGTCCTCCACTTCAAACAGGAGAGACACCTGCTCGGGCAT +
Preference number: 5 (lower is better)
Translates to: SVDHPAAGYSGRRGH*QVLHFKQERHLLGH
Trigger: ATGCCCGAGCAGGTGTCTCTCCTGTTTGAAGTGGAGGACCTGGCAATGGCCTCTCCGGCCACTGTATCCCGCTGCGGGATGGTCTACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 90 bp CCACGGGACCCACCAGCAGAATGGGATTCTGGTTGGCCACCAAGCTaGTCACCAGGTAGTTGTAGCGAACAGTGTCGACGGTGGGCACCA +
Preference number: 5 (lower is better)
Translates to: PRDPPAEWDSGWPPS*SPGSCSEQCRRWAP
Trigger: TGGTGCCCACCGTCGACACTGTTCGCTACAACTACCTGGTGAGCAGCTTGGTGGCCAACCAGAATCCCATTCTGCTGGTGGGTCCCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 90 bp ACCTCTGTGGCTGTGATCTTGGAGGTATGCAGCGTGTTCACCAGCTaGACATCATCCAGCAGGGAGCCGGTGGCCTCATTCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: TSVAVILEVCSVFTS*TSSSREPVASFSSR
Trigger: GCGGCTGCTGAATGAGGCCACCGGCTCCCTGCTGGATGATGTGCAGCTGGTGAACACGCTGCATACCTCCAAGATCACAGCCACAGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS GCA 90 bp CCTGGGAGCTTCCTCGGCCACTCAATCGCTGCTTCTTCTCAGCTTTaGTGGACATCGTGCAGGCAAAACCTTGCCACGCTGACCCTCCCC +
Preference number: 5 (lower is better)
Translates to: PGSFLGHSIAASSQL*WTSCRQNLATLTLP
Trigger: GGGGAGGGTCAGCGTGGCAAGGTTTTGCCTGCACGATGTCCAGCAAAGCTGAGAAGAAGCAGCGATTGAGTGGCCGAGGAAGCTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS GCA 90 bp CCAGGCGCAAAGTCTGAGGCGCTGGGCACTCTCTTTTCATTAGGCTaGAGCCTAACGGCACCTGTGGCTCTCCTTCCTCATCCCCACAGG +
Preference number: 5 (lower is better)
Translates to: PGAKSEALGTLFSLG*SLTAPVALLPHPHR
Trigger: CCTGTGGGGATGAGGAAGGAGAGCCACAGGTGCCGTTAGGCTGCAGCCTAATGAAAAGAGAGTGCCCAGCGCCTCAGACTTTGCGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS GCA 90 bp CGCCCTGACCAGCTTGCCTGGGAGCTTCCTCGGCCACTCAATCGCTaGTTCTTCTCAGCTTTGCTGGACATCGTGCAGGCAAAACCTGGG +
Preference number: 5 (lower is better)
Translates to: RPDQLAWELPRPLNR*FFSALLDIVQAKPG
Trigger: CCCAGGTTTTGCCTGCACGATGTCCAGCAAAGCTGAGAAGAAGCAGCGATTGAGTGGCCGAGGAAGCTCCCAGGCAAGCTGGTCAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS CCA 90 bp CCAGGTCAGCGTAGTCAGTGTAGACCATCCCGCAGCGGGATACAGTaGCCGGAGAGGCCATTGCCAGGTCCTCCACTTCAAACAGGAGAG +
Preference number: 5 (lower is better)
Translates to: PGQRSQCRPSRSGIQ*PERPLPGPPLQTGE
Trigger: CTCTCCTGTTTGAAGTGGAGGACCTGGCAATGGCCTCTCCGGCCACTGTATCCCGCTGCGGGATGGTCTACACTGACTACGCTGACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AGGGTCACCCTCATGGTCTGTTCCACATCGCCAAGCCAGGACTCCACAGGGCCTTGCACCAGGGAGAACTaGAGGTGCGAACAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: RVTLMVCSTSPSQDSTGPCTREN*RCEQSS
Trigger: GCTGGACTGTTCGCACCTCAAGTTCTCCCTGGTGCA...AGGCCCTGTGGAGTCCTGGCTTGGCGATGTGGAACAGACCATGAGGGTGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp GTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGGCGCCATGAGGCAGTCTaGCCGCTGCCCGTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: VAGVLGFIQLENLGEGERRHEAV*PLPVQP
Trigger: GGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCG...CCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS TCA 90 bp TCAGGTAGGTGTGCAGCTCCAGGAGGCGCCCAGCAGCCATCTCCCTaGGCAGAGTCGCGAACTTGTTCTGCCATTCATTGCAGTGCTGCA +
Preference number: 5 (lower is better)
Translates to: SGRCAAPGGAQQPSP*AESRTCSAIHCSAA
Trigger: TGCAGCACTGCAATGAATGGCAGAACAAGTTCGCGACTCTGCTCAGGGAGATGGCTGCTGGGCGCCTCCTGGAGCTGCACACCTACCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS TCA 90 bp TCCAATGATCAGGTGTCATGGCCCCAGACCGCAGGTCAATGCCGATaGCAAAGGAGGCTCGGTCTGAGCTGCCTGCCCGGTTGGGATAGT +
Preference number: 5 (lower is better)
Translates to: SNDQVSWPQTAGQCR*QRRLGLSCLPGWDS
Trigger: ACTATCCCAACCGGGCAGGCAGCTCAGACCGAGCCTCCTTTGTCATCGGCATTGACCTGCGGTCTGGGGCCATGACACCTGATCATTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 90 bp AAGCGGGGATCTCGGACAGGTGCTCAGAATCCCAGGCGCAAAGTCTaGGGCGCTGGGCACTCTCTTTTCATTAGGCTGCAGCCTAACGGC +
Preference number: 5 (lower is better)
Translates to: KRGSRTGAQNPRRKV*GAGHSLFIRLQPNG
Trigger: GCCGTTAGGCTGCAGCCTAATGAAAAGAGAGTGCCCAGCGCCTCAGACTTTGCGCCTGGGATTCTGAGCACCTGTCCGAGATCCCCGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS GCA 90 bp CTGGGCAAAGTGTTCCAGAATGGCATCATGCTCCTGTGTCCACACTaGATCCGCCAGTCCTGTCAGCGCAGCTCGGGAAAGGAAGAGGGG +
Preference number: 5 (lower is better)
Translates to: LGKVFQNGIMLLCPH*IRQSCQRSSGKEEG
Trigger: CCCCTCTTCCTTTCCCGAGCTGCGCTGACAGGACTGGCGGATGCAGTGTGGACACAGGAGCATGATGCCATTCTGGAACACTTTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 90 bp CGGCACTCCGTGATGAAGAAGGCACTGGCCCCCTTCAAGGCCCAGTaGAGTTTCTTGAGTCCCGGGTGGATCTTCTTATCCAGGAGCCGA +
Preference number: 5 (lower is better)
Translates to: RHSVMKKALAPFKAQ*SFLSPGWIFLSRSR
Trigger: TCGGCTCCTGGATAAGAAGATCCACCCGGGACTCAAGAAACTGCACTGGGCCTTGAAGGGGGCCAGTGCCTTCTTCATCACGGAGTGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 90 bp GTCTCCAGCTGCTCAGTCACCTCTGTGGCTGTGATCTTGGAGGTATaGAGCGTGTTCACCAGCTGCACATCATCCAGCAGGGAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: VSSCSVTSVAVILEV*SVFTSCTSSSREPV
Trigger: CACCGGCTCCCTGCTGGATGATGTGCAGCTGGTGAACACGCTGCATACCTCCAAGATCACAGCCACAGAGGTGACTGAGCAGCTGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS GCA 90 bp CCTGGCAGCATCGCCTTCTCCGGGGCAGCATTGGTATACCACAGGTaGCAGTCACGAGGGTACTGCTCAAAGGAGTTCATGAGTCCGTGG +
Preference number: 5 (lower is better)
Translates to: PGSIAFSGAALVYHR*QSRGYCSKEFMSPW
Trigger: CCACGGACTCATGAACTCCTTTGAGCAGTACCCTCGTGACTGGCACCTGTGGTATACCAATGCTGCCCCGGAGAAGGCGATGCTGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS GCA 90 bp CGCCCTGACCAGCTTGCCTGGGAGCTTCCTCGGCCACTCAATCGCTaGTTCTTCTCAGCTTTGCTGGACATCGTGCAGGCAAAACCTTGC +
Preference number: 5 (lower is better)
Translates to: RPDQLAWELPRPLNR*FFSALLDIVQAKPC
Trigger: GCAAGGTTTTGCCTGCACGATGTCCAGCAAAGCTGAGAAGAAGCAGCGATTGAGTGGCCGAGGAAGCTCCCAGGCAAGCTGGTCAGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS GCA 90 bp TCTCTCAGAAAGGTAGGATGGCAGGAAGCGGGGATCTCGGACAGGTaGTCAGAATCCCAGGCGCAAAGTCTGAGGCGCTGGGCACTCTCT +
Preference number: 5 (lower is better)
Translates to: SLRKVGWQEAGISDR*SESQAQSLRRWALS
Trigger: AGAGAGTGCCCAGCGCCTCAGACTTTGCGCCTGGGATTCTGAGCACCTGTCCGAGATCCCCGCTTCCTGCCATCCTACCTTTCTGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS CCA 90 bp GCGTGGGCAGGAAGCGCTGTACCACGGTGTTGTACATGTCCAGGGTaGCCTCTGTCACCACGTTCCCAATGGGCTTCACCTCTTCCTCAA +
Preference number: 5 (lower is better)
Translates to: AWAGSAVPRCCTCPG*PLSPRSQWASPLPQ
Trigger: TTGAGGAAGAGGTGAAGCCCATTGGGAACGTGGTGACAGAGGCCACCCTGGACATGTACAACACCGTGGTACAGCGCTTCCTGCCCACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GGCCAGGTGGCAGTTCCGGAGAAGGTCCCGCAGGGTCACCCTCATGGTCTGTTCCACTCCTTCACCCATTaGTCCCTCTTGTTGAGGAAC +
Preference number: 5 (lower is better)
Translates to: GQVAVPEKVPQGHPHGLFHSFTH*SLLLRN
Trigger: GTTCCTCAACAAGAGGGACAAATGGGTGAAGGAGTG...GAACAGACCATGAGGGTGACCCTGCGGGACCTTCTCCGGAACTGCCACCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp AAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCACCAGAGCCACAATGTGCCTGCAGGGCCTTaGGGGGAGCCCCCTCGGTGC +
Preference number: 5 (lower is better)
Translates to: KLLQHIPGMNFYRHQSHNVPAGP*GEPPRC
Trigger: GCACCGAGGGGGCTCCCCCAAAGGCCCTGCAGGCAC...ATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS TCA 90 bp GTTGTTCTGCACGCGTTCAATGAGGTAGGCGAAGAGGCTGTCCGATaGCTCAGGCACCTGCTCCACCCGGGCCTGGTCTATGATATGCGA +
Preference number: 5 (lower is better)
Translates to: VVLHAFNEVGEEAVR*LRHLLHPGLVYDMR
Trigger: TCGCATATCATAGACCAGGCCCGGGTGGAGCAGGTGCCTGAGTCATCGGACAGCCTCTTCGCCTACCTCATTGAACGCGTGCAGAACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 90 bp CCACCTTCCTGTGGATATTCTCCTGAGTTCCCAGGTCTACTCCTATaGGGCACTTCTCAGCCACCTCGAGCAGGGCCTCTTGGGGCCACT +
Preference number: 5 (lower is better)
Translates to: PPSCGYSPEFPGLLL*GTSQPPRAGPLGAT
Trigger: AGTGGCCCCAAGAGGCCCTGCTCGAGGTGGCTGAGAAGTGCCTCATAGGAGTAGACCTGGGAACTCAGGAGAATATCCACAGGAAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 90 bp GGCCTCAGTCCTAGGTGCAACATCTGTCTTAGCTCCTGGAGTCCCTaGCCCTCTCTCTCAAGCGGAGAAGAGGAGGAGGTCTCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: GLSPRCNICLSSWSP*PSLSSGEEEEVSAV
Trigger: GACAGCTGAGACCTCCTCCTCTTCTCCGCTTGAGAGAGAGGGTCAGGGACTCCAGGAGCTAAGACAGATGTTGCACCTAGGACTGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 90 bp TCTCCTGTCTCCACAGTCTCCTGGGCACTGAGCATCTCCTTTATCTaGCGGGTCCAGTGGATCATGGAGGTCTCTAGCCGTTGCACCAGC +
Preference number: 5 (lower is better)
Translates to: SPVSTVSWALSISFI*RVQWIMEVSSRCTS
Trigger: GCTGGTGCAACGGCTAGAGACCTCCATGATCCACTGGACCCGGCAGATAAAGGAGATGCTCAGTGCCCAGGAGACTGTGGAGACAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 90 bp AGGCGCCCAGCAGCCATCTCCCTGAGCAGAGTCGCGAACTTGTTCTaGCATTCATTGCAGTGCTGCACCAGGGAGAACTTGAGGTGCGAA +
Preference number: 5 (lower is better)
Translates to: RRPAAISLSRVANLF*HSLQCCTRENLRCE
Trigger: TTCGCACCTCAAGTTCTCCCTGGTGCAGCACTGCAATGAATGGCAGAACAAGTTCGCGACTCTGCTCAGGGAGATGGCTGCTGGGCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS GCA 90 bp GAACCGGCCAGTCTTCCACTCATTCCAGTTCTCCTCCCAGTCTCGTaGGATCTCCCAGATTTGCTGGAGGGCATCGAGCTCCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: EPASLPLIPVLLPVS*DLPDLLEGIELLLQ
Trigger: CTGGAGAAGGAGCTCGATGCCCTCCAGCAAATCTGGGAGATCGCACGAGACTGGGAGGAGAACTGGAATGAGTGGAAGACTGGCCGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 90 bp GGCTTCCTCCATCAGTCTCCAGAGAAGCATCAAGCTGCGCTTTCCTaGCTCAAACTAGAGCCTGAGGCGCATGCACCGTGGGGTTCACCA +
Preference number: 5 (lower is better)
Translates to: GFLHQSPEKHQAALS*LKLEPEAHAPWGSP
Trigger: TGGTGAACCCCACGGTGCATGCGCCTCAGGCTCTAGTTTGAGGCAGGAAAGCGCAGCTTGATGCTTCTCTGGAGACTGATGGAGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS CCA 90 bp TGCGGCACGTCCCGCACCAACTCGAAGGCTGAGGTGATCAGGTTCTaGGTCATCACCTCCAGGTCCTTGATTCCGGCACGGAACTTATTG +
Preference number: 5 (lower is better)
Translates to: CGTSRTNSKAEVIRF*VITSRSLIPARNLL
Trigger: CAATAAGTTCCGTGCCGGAATCAAGGACCTGGAGGTGATGACCCAGAACCTGATCACCTCAGCCTTCGAGTTGGTGCGGGACGTGCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 90 bp TCTTCCCAGTCCCCACGGGACCCACCAGCAGAATGGGATTCTGGTTaGCCACCAAGCTGCTCACCAGGTAGTTGTAGCGAACAGTGTCGA +
Preference number: 5 (lower is better)
Translates to: SSQSPRDPPAEWDSG*PPSCSPGSCSEQCR
Trigger: TCGACACTGTTCGCTACAACTACCTGGTGAGCAGCTTGGTGGCCAACCAGAATCCCATTCTGCTGGTGGGTCCCGTGGGGACTGGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp AGGTTGGTGATGATGAAGGAGGTCACGCAGAAGGCCACGCGGTCCTaGCGCAGGGAGCGAACGATCAGCATCCGTTGCATTTCATTGCAG +
Preference number: 5 (lower is better)
Translates to: RLVMMKEVTQKATRS*RRERTISIRCISLQ
Trigger: CTGCAATGAAATGCAACGGATGCTGATCGTTCGCTCCCTGCGCCAGGACCGCGTGGCCTTCTGCGTGACCTCCTTCATCATCACCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGGCTCAGGCTCCTCCTaGGGGAGCTCAGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSGSGSS*GSSACS
Trigger: GCTGCAGGCTGAGCTCCCCAAGGAGGAGCCTGAGCC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGGAAGGGGACCCTGCTaGCCATCTTCCCAGCGGGCG +
Preference number: 5 (lower is better)
Translates to: QLGISRATSHKFGQGQSLGRGPC*PSSQRA
Trigger: CGCCCGCTGGGAAGATGGCAAGCAGGGTCCCCTTCC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCCCGCTGGATCTCATCCCGGACCTGGTCCCAGTGCCTCTCTCTAAGGGCAATGAAGGAGTCCTTGTaGATCTCCCAGATCTCCCGG +
Preference number: 5 (lower is better)
Translates to: NSRWISSRTWSQCLSLRAMKESL*ISQISR
Trigger: CCGGGAGATCTGGGAGATCAACAAGGACTCCTTCAT...TGCCCTTAGAGAGAGGCACTGGGACCAGGTCCGGGATGAGATCCAGCGGGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp ATCCACAGTGTGTCCACGGGGCCATCGAACAGGATCCACTTCTCGTCGGGTTTCACAACCCACTCCCCGTaGAGACTGTCCAGCATCTCC +
Preference number: 5 (lower is better)
Translates to: IHSVSTGPSNRIHFSSGFTTHSP*RLSSIS
Trigger: GGAGATGCTGGACAGTCTCAACGGGGAGTGGGTTGT...GAAACCCGACGAGAAGTGGATCCTGTTCGATGGCCCCGTGGACACACTGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp AGAATGCGCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTGACTGTCCAGCAGAGTTaGTTGGAAGACAACCCACTC +
Preference number: 5 (lower is better)
Translates to: RMRHEAVLPLPVQPTIMVTVQQS*LEDNPL
Trigger: GAGTGGGTTGTCTTCCAACAAACTCTGCTGGACAGT...CACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp CTCTTGTTGAGGAACTTCCTGAGGGCCAGGTGGCAGTTCCGGAGAAGGTCCCGCCTCCGGAGAGCATTGTaGTCCTTGTTCATCCTGTCC +
Preference number: 5 (lower is better)
Translates to: LLLRNFLRARWQFRRRSRLRRAL*SLFILS
Trigger: GGACAGGATGAACAAGGACAACAATGCTCTCCGGAG...GCGGGACCTTCTCCGGAACTGCCACCTGGCCCTCAGGAAGTTCCTCAACAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp AGGGTCACCCTCATGGTCTGTTCCACATCGCCAAGCCAGGACTCCACAGGGCCTTACAACTGGAAAACCTaGGTGAGGGTGAACGGCGTG +
Preference number: 5 (lower is better)
Translates to: RVTLMVCSTSPSQDSTGPYNWKT*VRVNGV
Trigger: CACGCCGTTCACCCTCACCAAGGTTTTCCAGTTGTA...AGGCCCTGTGGAGTCCTGGCTTGGCGATGTGGAACAGACCATGAGGGTGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp GGCCAGGTGGCAGTTCCGGAGAAGGTCCCGCAGGGTCACCCTCATGGTCTGTTCTGGAAAAGGGTGTGCTaGCCAGTCCGTGAATTCATA +
Preference number: 5 (lower is better)
Translates to: GQVAVPEKVPQGHPHGLFWKRVC*PVREFI
Trigger: TATGAATTCACGGACTGGCAAGCACACCCTTTTCCA...GAACAGACCATGAGGGTGACCCTGCGGGACCTTCTCCGGAACTGCCACCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS TCA 90 bp CATCCAGTGAGAACTGGTACATGGGGTCGATGCAGCCCATATCATTaGGCACGAAGAACAGGATTGATGCCCGCTGGGCGCATGGGCGGT +
Preference number: 5 (lower is better)
Translates to: HPVRTGTWGRCSPYH*ARRTGLMPAGRMGG
Trigger: ACCGCCCATGCGCCCAGCGGGCATCAATCCTGTTCTTCGTGCTCAATGATATGGGCTGCATCGACCCCATGTACCAGTTCTCACTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS TCA 90 bp CTGCAGCTGCTCCACCAGCTTGTCCAGATTAGGCATCCAAGACAGTaGCAGGTGGCAGTTTGCCAGGAACACCCAGTGTCCCTGAGTCAC +
Preference number: 5 (lower is better)
Translates to: LQLLHQLVQIRHPRQ*QVAVCQEHPVSLSH
Trigger: GTGACTCAGGGACACTGGGTGTTCCTGGCAAACTGCCACCTGTCACTGTCTTGGATGCCTAATCTGGACAAGCTGGTGGAGCAGCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS GCA 90 bp CTTGGCCTCTGCCCATGTGGGCTCGTTGCCTCGAAGAATCATAACTaGCTGCATCACTATCTCCACTTGGGCTGGGGGCCGTCCATAAGA +
Preference number: 5 (lower is better)
Translates to: LGLCPCGLVASKNHN*LHHYLHLGWGPSIR
Trigger: TCTTATGGACGGCCCCCAGCCCAAGTGGAGATAGTGATGCAGGCAGTTATGATTCTTCGAGGCAACGAGCCCACATGGGCAGAGGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 90 bp GCACTGGCCCCCTTCAAGGCCCAGTGCAGTTTCTTGAGTCCCGGGTaGATCTTCTTATCCAGGAGCCGAATACGCTCTTTGAATAGGGCC +
Preference number: 5 (lower is better)
Translates to: ALAPFKAQCSFLSPG*IFLSRSRIRSLNRA
Trigger: GGCCCTATTCAAAGAGCGTATTCGGCTCCTGGATAAGAAGATCCACCCGGGACTCAAGAAACTGCACTGGGCCTTGAAGGGGGCCAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp CATTTTCCCACTCACCTGGCAGCATCGCCTTCTCCGGGGCAGCATTaGTATACCACAGGTGCCAGTCACGAGGGTACTGCTCAAAGGAGT +
Preference number: 5 (lower is better)
Translates to: HFPTHLAASPSPGQH*YTTGASHEGTAQRS
Trigger: ACTCCTTTGAGCAGTACCCTCGTGACTGGCACCTGTGGTATACCAATGCTGCCCCGGAGAAGGCGATGCTGCCAGGTGAGTGGGAAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 90 bp GGTCCTTGCAGCGCTGCACAAAGGCATCAACCTGAGCAAAGATGCTaGTCTGATCTAGGACCCAGCCCCGACTGGAGAACTGGATGTGCA +
Preference number: 5 (lower is better)
Translates to: GPCSAAQRHQPEQRC*SDLGPSPDWRTGCA
Trigger: TGCACATCCAGTTCTCCAGTCGGGGCTGGGTCCTAGATCAGACCAGCATCTTTGCTCAGGTTGATGCCTTTGTGCAGCGCTGCAAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGAAGGGGACCCTGCTaGCCATCTTCCCAGCGGGCG +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSGRGPC*PSSQRA
Trigger: CGCCCGCTGGGAAGATGGCAAGCAGGGTCCCCTTCC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTGCTCGGGCATCGCGATGCGCTCGCCGTTGATGAGGGTCAACACCTTGTTATCTTGTTCTGCCATTCATaGCAGTGCTGCACCAGGGAG +
Preference number: 5 (lower is better)
Translates to: LLGHRDALAVDEGQHLVILFCHS*QCCTRE
Trigger: CTCCCTGGTGCAGCACTGCAATGAATGGCAGAACAA...GATAACAAGGTGTTGACCCTCATCAACGGCGAGCGCATCGCGATGCCCGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp TCCGTGAGAACGAGCCGAGGAGGGCCGCCCAAGCCTACACAGTGCTTACAACAGTCCTTCTCAAAGGCCTaGACAAAGCGTGATGCCTTC +
Preference number: 5 (lower is better)
Translates to: SVRTSRGGPPKPTQCLQQSFSKA*TKRDAF
Trigger: GAAGGCATCACGCTTTGTCAAGGCCTTTGAGAAGGA...CTGTTGTAAGCACTGTGTAGGCTTGGGCGGCCCTCCTCGGCTCGTTCTCACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGTGCCTGCAGGGCCTTaGGGGGAGCCCCCTCGGTGC +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRVPAGP*GEPPRC
Trigger: GCACCGAGGGGGCTCCCCCAAAGGCCCTGCAGGCAC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AGGGTCACCCTCATGGTCTGTTCCACATCGCCAAGCCAGGACTCCACAGGGCCTTTCTTGGCCAGAATCTaGCAGTTGCCAAAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: RVTLMVCSTSPSQDSTGPFLARI*QLPKPS
Trigger: AGAGGGCTTTGGCAACTGCAAGATTCTGGCCAAGAA...AGGCCCTGTGGAGTCCTGGCTTGGCGATGTGGAACAGACCATGAGGGTGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp AACTCCCGCTGGATCTCATCCCGGACCTGGTCCCAGTGCCTCTCTCTAAGGGCATCTTGCACGATGGCATaGAACAGGGGTGCATCAACT +
Preference number: 5 (lower is better)
Translates to: NSRWISSRTWSQCLSLRASCTMA*NRGAST
Trigger: AGTTGATGCACCCCTGTTCAATGCCATCGTGCAAGA...TGCCCTTAGAGAGAGGCACTGGGACCAGGTCCGGGATGAGATCCAGCGGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp CCTGCCCAACCTTGGTCCCACTCTGCAGCCTGGGTCACACAGCCCTCCATTCTCGAGTGGCGGGAGTTCTaGGTTTCATACAACTGGAAA +
Preference number: 5 (lower is better)
Translates to: PAQPWSHSAAWVTQPSILEWREF*VSYNWK
Trigger: TTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTC...GAGAATGGAGGGCTGTGTGACCCAGGCTGCAGAGTGGGACCAAGGTTGGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCGCCATGAGGCAGTCTaGCCGCTGCCCGTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGRHEAV*PLPVQP
Trigger: GGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTCCCCTAGCTGCCTCTaGGCCTCTGCCCATGTGGGC +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSSPSCL*ASAHVG
Trigger: GCCCACATGGGCAGAGGCCAAGAGGCAGCTAGGGGA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 90 bp GCTTACTGTCCAGCAGAGTTTGTTGGAAGACAACCCACTCCCCGTTaGGACTGTCCAGCATCTCCAGGACACTGTCCTCGACTGGCACCT +
Preference number: 5 (lower is better)
Translates to: AYCPAEFVGRQPTPR*DCPASPGHCPRLAP
Trigger: AGGTGCCAGTCGAGGACAGTGTCCTGGAGATGCTGGACAGTCTCAACGGGGAGTGGGTTGTCTTCCAACAAACTCTGCTGGACAGTAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS TCA 90 bp CCTTCTCCAGGTTCTGAAGGTCCTTGGAGGGTGGCTGCTCGATCTTaGAGATGCCCAGGTTGGCTCGGAGACTATTTTCCTCTTCCCGCA +
Preference number: 5 (lower is better)
Translates to: PSPGSEGPWRVAARS*RCPGWLGDYFPLPA
Trigger: TGCGGGAAGAGGAAAATAGTCTCCGAGCCAACCTGGGCATCTTCAAGATCGAGCAGCCACCCTCCAAGGACCTTCAGAACCTGGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 90 bp ATGGATTCTGTAGGGTCCTGGGCAAAGTGTTCCAGAATGGCATCATaGTCCTGTGTCCACACTGCATCCGCCAGTCCTGTCAGCGCAGCT +
Preference number: 5 (lower is better)
Translates to: MDSVGSWAKCSRMAS*SCVHTASASPVSAA
Trigger: AGCTGCGCTGACAGGACTGGCGGATGCAGTGTGGACACAGGAGCATGATGCCATTCTGGAACACTTTGCCCAGGACCCTACAGAATCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 90 bp GCGAAGAGGCTGTCCGATGACTCAGGCACCTGCTCCACCCGGGCCTaGTCTATGATATGCGACTGGATCTCTTCAAATTCATCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: AKRLSDDSGTCSTRA*SMICDWISSNSSGL
Trigger: CAAGCCTGATGAATTTGAAGAGATCCAGTCGCATATCATAGACCAGGCCCGGGTGGAGCAGGTGCCTGAGTCATCGGACAGCCTCTTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGGCTCAGGCTCCTCCTaGGGGAGCTCAGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGGSGSS*GSSACS
Trigger: GCTGCAGGCTGAGCTCCCCAAGGAGGAGCCTGAGCC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGGGAAGGGGACCCTGCTaGCCATCTTCCCAGCGGGCG +
Preference number: 5 (lower is better)
Translates to: LVAEQRHHWFSQIVEWFLGRGPC*PSSQRA
Trigger: CGCCCGCTGGGAAGATGGCAAGCAGGGTCCCCTTCC...CAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCACTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCCCACAGCTTCCCATTaGCTGCTGGGCCCTCCAACC +
Preference number: 5 (lower is better)
Translates to: QLGISRATSHKFGQGQSLPTASH*LLGPPT
Trigger: GGTTGGAGGGCCCAGCAGCAAATGGGAAGCTGTGGG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ATCCACAGTGTGTCCACGGGGCCATCGAACAGGATCCACTTCTCGTCGGGTTTCCCAGTAGAACCGAAGTaGGCTGAGCCAGTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: IHSVSTGPSNRIHFSSGFPVEPK*AEPVKG
Trigger: TCCTTTGACTGGCTCAGCCAACTTCGGTTCTACTGG...GAAACCCGACGAGAAGTGGATCCTGTTCGATGGCCCCGTGGACACACTGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp AACTCCCGCTGGATCTCATCCCGGACCTGGTCCCAGTGCCTCTCTCTAAGGGCAAGTGTGTACACCTTCTaGGCCAGAATCTTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: NSRWISSRTWSQCLSLRASVYTF*ARILQL
Trigger: CAACTGCAAGATTCTGGCCAAGAAGGTGTACACACT...TGCCCTTAGAGAGAGGCACTGGGACCAGGTCCGGGATGAGATCCAGCGGGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp AGAATGCGCCATGAGGCAGTCTTGCCGCTGCCCGTGCAGCCCACGATCATGGTGTCAACTGAAGTGAGCTaGGCGATGTTCATATCTCTC +
Preference number: 5 (lower is better)
Translates to: RMRHEAVLPLPVQPTIMVSTEVS*AMFISL
Trigger: GAGAGATATGAACATCGCCAAGCTCACTTCAGTTGA...CACCATGATCGTGGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCGCATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCGCCATGAGGCAGTCTaGCCGCTGCCCGTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWRHEAV*PLPVQP
Trigger: GGGCTGCACGGGCAGCGGCAAGACTGCCTCATGGCG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTCCCCTAGCTGCCTCTaGGCCTCTGCCCATGTGGGC +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSSPSCL*ASAHVG
Trigger: GCCCACATGGGCAGAGGCCAAGAGGCAGCTAGGGGA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCACATGCAGAGGGACTaGGCAGCCAGGGAGACGCGG +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSHMQRD*AARETR
Trigger: CCGCGTCTCCCTGGCTGCCAAGTCCCTCTGCATGTG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTCTTGTTGAGGAACTTCCTGAGGGCCAGGTGGCAGTTCCGGAGAAGGTCCCGCGGGCATCGAGCTCCTTaGAATTCGAAATCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: LLLRNFLRARWQFRRRSRGHRAP*NSKSSR
Trigger: TCTGGAAGATTTCGAATTCAAAGGAGCTCGATGCCC...GCGGGACCTTCTCCGGAACTGCCACCTGGCCCTCAGGAAGTTCCTCAACAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS TCA 90 bp TTCCGGCACGGAACTTATTGTAGTCTTCATGCCAACAGGTGTTCTTaGCATCCAGGATACCCCCGCGAACGGCTCGCAGCGTGTGCAGAT +
Preference number: 5 (lower is better)
Translates to: FRHGTYCSLHANRCS*HPGYPRERLAACAD
Trigger: ATCTGCACACGCTGCGAGCCGTTCGCGGGGGTATCCTGGATGTCAAGAACACCTGTTGGCATGAAGACTACAATAAGTTCCGTGCCGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS TCA 90 bp GTCCCTGTATACCCGTTTGCCACTAATGCGTACCAGCAGCTTCTCTaGCATCTCTTGGGCTCGCCAGCCAATGGTCAGAGTGGATGCCTT +
Preference number: 5 (lower is better)
Translates to: VPVYPFATNAYQQLL*HLLGSPANGQSGCL
Trigger: AAGGCATCCACTCTGACCATTGGCTGGCGAGCCCAAGAGATGTCAGAGAAGCTGCTGGTACGCATTAGTGGCAAACGGGTATACAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 90 bp CCTGCATCACTATCTCCACTTGGGCTGGGGGCCGTCCATAAGACTTaGTCTCTCCTATATCCTTCTTGTTCAGAGACTCCAGGGCCCGCA +
Preference number: 5 (lower is better)
Translates to: PASLSPLGLGAVHKT*SLLYPSCSETPGPA
Trigger: TGCGGGCCCTGGAGTCTCTGAACAAGAAGGATATAGGAGAGATCAAGTCTTATGGACGGCCCCCAGCCCAAGTGGAGATAGTGATGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 90 bp AGGTGCAGGATGGATTCAACGTGCTTCACTCCCTTCTTCACCAGCTaGTTACTGATGCCAGACAGGTCCATGCATCGGTTGCGCCAGAAC +
Preference number: 5 (lower is better)
Translates to: RCRMDSTCFTPFFTS*LLMPDRSMHRLRQN
Trigger: GTTCTGGCGCAACCGATGCATGGACCTGTCTGGCATCAGTAAGCAGCTGGTGAAGAAGGGAGTGAAGCACGTTGAATCCATCCTGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 90 bp CTAGCAGTGACCACTTCACATTCAGGCGCAGGGCATCCTCCATCATaGGGTCCAGCCGAATCATGTACAGCATCCACTGCTGCTGAATCT +
Preference number: 5 (lower is better)
Translates to: LAVTTSHSGAGHPPS*GPAESCTASTAAES
Trigger: AGATTCAGCAGCAGTGGATGCTGTACATGATTCGGCTGGACCGCATGATGGAGGATGCCCTGCGCCTGAATGTGAAGTGGTCACTGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 90 bp TCCCTGAGCAGAGTCGCGAACTTGTTCTGCCATTCATTGCAGTGCTaGACCAGGGAGAACTTGAGGTGCGAACAGTCCAGCAGCACAAAC +
Preference number: 5 (lower is better)
Translates to: SLSRVANLFCHSLQC*TRENLRCEQSSSTN
Trigger: GTTTGTGCTGCTGGACTGTTCGCACCTCAAGTTCTCCCTGGTGCAGCACTGCAATGAATGGCAGAACAAGTTCGCGACTCTGCTCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS GCA 90 bp ATCTCCCTGAGCAGAGTCGCGAACTTGTTCTGCCATTCATTGCAGTaGTGCACCAGGGAGAACTTGAGGTGCGAACAGTCCAGCAGCACA +
Preference number: 5 (lower is better)
Translates to: ISLSRVANLFCHSLQ*CTRENLRCEQSSST
Trigger: TGTGCTGCTGGACTGTTCGCACCTCAAGTTCTCCCTGGTGCAGCACTGCAATGAATGGCAGAACAAGTTCGCGACTCTGCTCAGGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS GCA 90 bp CAGGAGAGGCTGTCCACTGAAACGTTGTTTTGGCGAGCTGAAGACTaGAGCACAGCAGTGAGGAAGCCAGTGGGAAAGGTGAAACCAGAC +
Preference number: 5 (lower is better)
Translates to: QERLSTETLFWRAED*STAVRKPVGKVKPD
Trigger: GTCTGGTTTCACCTTTCCCACTGGCTTCCTCACTGCTGTGCTGCAGTCTTCAGCTCGCCAAAACAACGTTTCAGTGGACAGCCTCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp AGAAGGGACTTGTCAAAGTTGACATCCAGCATGCCCGCCTTCTCCTaGCTGATTCGCAGCAATGGGGTATCCAACCGCCGAATGCAATCC +
Preference number: 5 (lower is better)
Translates to: RRDLSKLTSSMPAFS*LIRSNGVSNRRMQS
Trigger: GGATTGCATTCGGCGGTTGGATACCCCATTGCTGCGAATCAGCCAGGAGAAGGCGGGCATGCTGGATGTCAACTTTGACAAGTCCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp TCCTCTTCCCGCATGGCCATCAGCATGGCCCGCACTTGTGTAATCTaGTCTAAGGCAGACATGTATCCCACGTTGCTGGTGAAATGGCCT +
Preference number: 5 (lower is better)
Translates to: SSSRMAISMARTCVI*SKADMYPTLLVKWP
Trigger: AGGCCATTTCACCAGCAACGTGGGATACATGTCTGCCTTAGACCAGATTACACAAGTGCGGGCCATGCTGATGGCCATGCGGGAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp CGCTTCTGCTGCACAATGATGACCAGGTACTCCTCACACTGCTTCTaGAACTCAGCCACCTTCTTCTTGGCATCCTCCAGCTCCAACGAC +
Preference number: 5 (lower is better)
Translates to: RFCCTMMTRYSSHCF*NSATFFLASSSSND
Trigger: GTCGTTGGAGCTGGAGGATGCCAAGAAGAAGGTGGCTGAGTTCCAGAAGCAGTGTGAGGAGTACCTGGTCATCATTGTGCAGCAGAAGCG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 90 bp CTCTGTGATGTTATCCCAGTAGGCATCTGCAAGCCAGCTACTACATaGATTGTCCATTTGGCCCTCCCGATCCAAGACCACACCCCCACG +
Preference number: 5 (lower is better)
Translates to: LCDVIPVGICKPATT*IVHLALPIQDHTPT
Trigger: CGTGGGGGTGTGGTCTTGGATCGGGAGGGCCAAATGGACAATCCATGTAGTAGCTGGCTTGCAGATGCCTACTGGGATAACATCACAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 90 bp CTCCTGTACTTGTCAAAGTTGACATCCAGCATGCCCGCCTTCTCCTaGCTGATTCGCAGCAATGGGGTATCCAACCGCCGAATGCAATCC +
Preference number: 5 (lower is better)
Translates to: LLYLSKLTSSMPAFS*LIRSNGVSNRRMQS
Trigger: GGATTGCATTCGGCGGTTGGATACCCCATTGCTGCGAATCAGCCAGGAGAAGGCGGGCATGCTGGATGTCAACTTTGACAAGTACAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570791.5
ENST00000575498.1
CDS-3UTR CAA 90 bp ATCCACAGTGTGTCCACGGGGCCATCGAACAGGATCCACTTCTCGTCGGGTTTCAGCACAAACTGGATGTaGGTGACTGTCTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: IHSVSTGPSNRIHFSSGFSTNWM*VTVSSF
Trigger: GAAGGAGGAGACAGTCACCAACATCCAGTTTGTGCT...GAAACCCGACGAGAAGTGGATCCTGTTCGATGGCCCCGTGGACACACTGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCCCACAGCTTCCCATTaGCTGCTGGGCCCTCCAACC +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSPTASH*LLGPPT
Trigger: GGTTGGAGGGCCCAGCAGCAAATGGGAAGCTGTGGG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCACCAGAGCCACAATCCCACAGCTTCCCATTaGCTGCTGGGCCCTCCAACC +
Preference number: 5 (lower is better)
Translates to: KLLQHIPGMNFYRHQSHNPTASH*LLGPPT
Trigger: GGTTGGAGGGCCCAGCAGCAAATGGGAAGCTGTGGG...ATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGCTGTCAGCAGGCACTaGGTGACATCAGCCGTCCAC +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSAVSRH*VTSAVH
Trigger: GTGGACGGCTGATGTCACCAAGTGCCTGCTGACAGC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GGCCAGGTGGCAGTTCCGGAGAAGGTCCCGCAGGGTCACCCTCATGGTCTGTTCATAATTATACTGAAATaGCGTGTTGGTCTGGCGGAT +
Preference number: 5 (lower is better)
Translates to: GQVAVPEKVPQGHPHGLFIIILK*RVGLAD
Trigger: ATCCGCCAGACCAACACGCAATTTCAGTATAATTAT...GAACAGACCATGAGGGTGACCCTGCGGGACCTTCTCCGGAACTGCCACCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGTGCCTGCAGGGCCTTaGGGGGAGCCCCCTCGGTGC +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATVPAGP*GEPPRC
Trigger: GCACCGAGGGGGCTCCCCCAAAGGCCCTGCAGGCAC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGCTCCACCTCAGCCTTaGGCCTCTTCTCCAGCCATG +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSAPPQP*ASSPAM
Trigger: CATGGCTGGAGAAGAGGCCAAAGGCTGAGGTGGAGC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCTCAGCGAGCGCGGCTaGCTTCTCCCGAAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLLSERG*LLPKLS
Trigger: GCTCAGCTTCGGGAGAAGCAAGCCGCGCTCGCTGAG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCAGGAGTACATGCCCTaGGCGCTCTTCTTGCGGCTC +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSQEYMP*ALFLRL
Trigger: GAGCCGCAAGAAGAGCGCCAAGGGCATGTACTCCTG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GTACGTGCATTTGTCCCTTCTCTCATCGCTCCAGGCCACCATGGTCCCAGGTACCGTACTCTAACAATGTaGAAGTTAGGGTCTCCGGCG +
Preference number: 5 (lower is better)
Translates to: VRAFVPSLIAPGHHGPRYRTLTM*KLGSPA
Trigger: CGCCGGAGACCCTAACTTCAACATTGTTAGAGTACG...GTACCTGGGACCATGGTGGCCTGGAGCGATGAGAGAAGGGACAAATGCACGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp ACAGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTTGCAGTGGCGTGATCTaGGCTGACTGCAACCTCCGC +
Preference number: 5 (lower is better)
Translates to: TGSSMLGNRSCTMALNRGCSGVI*ADCNLR
Trigger: GCGGAGGTTGCAGTCAGCCAAGATCACGCCACTGCA...ACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS TCA 90 bp CCAGAGGACCTAAATTTTCTCCTGTCTCCACAGTCTCCTGGGCACTaGGCATCTCCTTTATCTGCCGGGTCCAGTGGATCATGGAGGTCT +
Preference number: 5 (lower is better)
Translates to: PEDLNFLLSPQSPGH*ASPLSAGSSGSWRS
Trigger: AGACCTCCATGATCCACTGGACCCGGCAGATAAAGGAGATGCTCAGTGCCCAGGAGACTGTGGAGACAGGAGAAAATTTAGGTCCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 90 bp CTCCCGGTACATGTCCCAGGTCTTGAGGTAGTTCTGCAGCAGGCTTaGGTTGTTAGTCATGCCGCTGCTGATTTGGGTCTGGATCTTCTT +
Preference number: 5 (lower is better)
Translates to: LPVHVPGLEVVLQQA*VVSHAAADLGLDLL
Trigger: AAGAAGATCCAGACCCAAATCAGCAGCGGCATGACTAACAACGCAAGCCTGCTGCAGAACTACCTCAAGACCTGGGACATGTACCGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS GCA 90 bp GGAGCCGAGCTTGTCGCTTATGATGCCCATGAAGGCTTCTGTGTCTaGCGCATCAACCAGCCGGTCAGAGAAGACTCTGAAACATTCATG +
Preference number: 5 (lower is better)
Translates to: GAELVAYDAHEGFCV*RINQPVREDSETFM
Trigger: CATGAATGTTTCAGAGTCTTCTCTGACCGGCTGGTTGATGCGGCAGACACAGAAGCCTTCATGGGCATCATAAGCGACAAGCTCGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 90 bp TCCGGGGCAGCATTGGTATACCACAGGTGCCAGTCACGAGGGTACTaGTCAAAGGAGTTCATGAGTCCGTGGAAGTTGGTCAGTTTGTCT +
Preference number: 5 (lower is better)
Translates to: SGAALVYHRCQSRGY*SKEFMSPWKLVSLS
Trigger: AGACAAACTGACCAACTTCCACGGACTCATGAACTCCTTTGAGCAGTACCCTCGTGACTGGCACCTGTGGTATACCAATGCTGCCCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 90 bp CCCAAACTGCACAGTTGCCTCGAAGTTCTCCCAGGTGATGGGAACTaGTGCTTGGCGAATGAAGTAGACAAGCTGGTTCTGGGTCTGTAC +
Preference number: 5 (lower is better)
Translates to: PKLHSCLEVLPGDGN*CLANEVDKLVLGLY
Trigger: GTACAGACCCAGAACCAGCTTGTCTACTTCATTCGCCAAGCACCAGTTCCCATCACCTGGGAGAACTTCGAGGCAACTGTGCAGTTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 90 bp GCACCAGCTCTTTGTCCTTTATCACCATCTCAGGCTTCATGTTCATaGCCTCTGCAGGGATGTAGAGGACCGTGTGCCCCTCCAGTTTGT +
Preference number: 5 (lower is better)
Translates to: APALCPLSPSQASCS*PLQGCRGPCAPPVC
Trigger: ACAAACTGGAGGGGCACACGGTCCTCTACATCCCTGCAGAGGCCATGAACATGAAGCCTGAGATGGTGATAAAGGACAAAGAGCTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 90 bp ACCCGTTTGCCACTAATGCGTACCAGCAGCTTCTCTGACATCTCTTaGGCTCGCCAGCCAATGGTCAGAGTGGATGCCTTGAACTCATTC +
Preference number: 5 (lower is better)
Translates to: TRLPLMRTSSFSDIS*ARQPMVRVDALNSF
Trigger: GAATGAGTTCAAGGCATCCACTCTGACCATTGGCTGGCGAGCCCAAGAGATGTCAGAGAAGCTGCTGGTACGCATTAGTGGCAAACGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp CGACTGGCACCTCGTACTTTTCAAGAATGGCAAATTGCTCGTGTATaGGAGGGATCTGAGTCTCCACGTTGGCCAAGTCGTGCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: RLAPRTFQEWQIARV*EGSESPRWPSRASG
Trigger: CCCTGAAGCACGACTTGGCCAACGTGGAGACTCAGATCCCTCCCATACACGAGCAATTTGCCATTCTTGAAAAGTACGAGGTGCCAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACCCGCCCTGACCAGCTaGCCTGGGAGCTTCCTCGGC +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATPALTS*PGSFLG
Trigger: GCCGAGGAAGCTCCCAGGCAAGCTGGTCAGGGCGGG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTCCCGCCCTGACCAGCTaGCCTGGGAGCTTCCTCGGC +
Preference number: 5 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFPALTS*PGSFLG
Trigger: GCCGAGGAAGCTCCCAGGCAAGCTGGTCAGGGCGGG...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGCCCAGTGCAGTTTCTaGAGTCCCGGGTGGATCTTC +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSAQCSF*SPGWIF
Trigger: GAAGATCCACCCGGGACTCAAGAAACTGCACTGGGC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCACCAGAGCCACAATGCTGTCAGCAGGCACTaGGTGACATCAGCCGTCCAC +
Preference number: 5 (lower is better)
Translates to: KLLQHIPGMNFYRHQSHNAVSRH*VTSAVH
Trigger: GTGGACGGCTGATGTCACCAAGTGCCTGCTGACAGC...ATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp ATCCACAGTGTGTCCACGGGGCCATCGAACAGGATCCACTTCTCGTCGGGTTTCAGGCCCTCAGAGCAGTaGACCACAATGACATATATG +
Preference number: 5 (lower is better)
Translates to: IHSVSTGPSNRIHFSSGFRPSEQ*TTMTYM
Trigger: CATATATGTCATTGTGGTCAACTGCTCTGAGGGCCT...GAAACCCGACGAGAAGTGGATCCTGTTCGATGGCCCCGTGGACACACTGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp TTCATACCTCTGGGTGCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGATGAGGGTCAACACCTaGTTATCGTCCATGACGGAG +
Preference number: 5 (lower is better)
Translates to: FIPLGAQTRVLPHASVRTMRVNT*LSSMTE
Trigger: CTCCGTCATGGACGATAACAAGGTGTTGACCCTCAT...CGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGCACCCAGAGGTATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGCGATGCGCTCGCCGTaGATGAGGGTCAACACCTTG +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSAMRSP*MRVNTL
Trigger: CAAGGTGTTGACCCTCATCAACGGCGAGCGCATCGC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGCTCCACCTCAGCCTTaGGCCTCTTCTCCAGCCATG +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSAPPQP*ASSPAM
Trigger: CATGGCTGGAGAAGAGGCCAAAGGCTGAGGTGGAGC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGTCTGTGCGGACATGTaGACAACGAGCACCGACCAC +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSVCADM*TTSTDH
Trigger: GTGGTCGGTGCTCGTTGTCAACATGTCCGCACAGAC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCGCTGTACCACGGTGTaGTACATGTCCAGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSRCTTV*YMSRVA
Trigger: GGCCACCCTGGACATGTACAACACCGTGGTACAGCG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTATGAAGGACGTGGTCTaGAGCTCCACCCCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSMKDVV*SSTPAW
Trigger: CCAGGCTGGGGTGGAGCTCAAGACCACGTCCTTCAT...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCCTGTCCGCAGTTTATaGGCTTGGGCCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSPVRSL*AWASSS
Trigger: GGAGCTGCTGGCCCAAGCCAATAAACTGCGGACAGG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTCAGCGAGCGCGGCTaGCTTCTCCCGAAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRLSERG*LLPKLS
Trigger: GCTCAGCTTCGGGAGAAGCAAGCCGCGCTCGCTGAG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGCACGAAGAACAGGATaGATGCCCGCTGGGCGCATG +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSARRTG*MPAGRM
Trigger: CATGCGCCCAGCGGGCATCAATCCTGTTCTTCGTGC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTCAGGGACCCAGGGCTaGAAGGCTCCGGGACTAAAG +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSSGTQG*KAPGLK
Trigger: CTTTAGTCCCGGAGCCTTCAAGCCCTGGGTCCCTGA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGGCCACTCTAAGAAGTaGCCCCTCGCAGCCCTCTCG +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGGHSKK*PLAALS
Trigger: CGAGAGGGCTGCGAGGGGCAACTTCTTAGAGTGGCC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS TCA 90 bp TCCAGGATACCCCCGCGAACGGCTCGCAGCGTGTGCAGATTTTTATaGAAGATGTCCTCAATCTCCAGCAAGTTCCGTGTTATCTGTGGC +
Preference number: 5 (lower is better)
Translates to: SRIPPRTARSVCRFL*KMSSISSKFRVICG
Trigger: GCCACAGATAACACGGAACTTGCTGGAGATTGAGGACATCTTTCATAAAAATCTGCACACGCTGCGAGCCGTTCGCGGGGGTATCCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS TCA 90 bp GCCATTTCTTGTTCCGTTCACGGTTCACCAGGGCCAGCTCGCTATTaGACAGCATGTAGAGATCCACCGCCTTCTTGTCATAAGTCCGCT +
Preference number: 5 (lower is better)
Translates to: AISCSVHGSPGPARY*TACRDPPPSCHKSA
Trigger: AGCGGACTTATGACAAGAAGGCGGTGGATCTCTACATGCTGTTCAATAGCGAGCTGGCCCTGGTGAACCGTGAACGGAACAAGAAATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
ENST00000575498.1
CDS TCA 90 bp CTGACATCTCTTGGGCTCGCCAGCCAATGGTCAGAGTGGATGCCTTaGACTCATTCACAATCATCTGCACCTTGCTGGCATGTATACGGC +
Preference number: 5 (lower is better)
Translates to: LTSLGLASQWSEWMP*THSQSSAPCWHVYG
Trigger: GCCGTATACATGCCAGCAAGGTGCAGATGATTGTGAATGAGTTCAAGGCATCCACTCTGACCATTGGCTGGCGAGCCCAAGAGATGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 90 bp TCGTACTTTTCAAGAATGGCAAATTGCTCGTGTATGGGAGGGATCTaGGTCTCCACGTTGGCCAAGTCGTGCTTCAGGGCATCCACGAGC +
Preference number: 5 (lower is better)
Translates to: SYFSRMANCSCMGGI*VSTLAKSCFRASTS
Trigger: GCTCGTGGATGCCCTGAAGCACGACTTGGCCAACGTGGAGACTCAGATCCCTCCCATACACGAGCAATTTGCCATTCTTGAAAAGTACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS TCA 90 bp CCTGCATCACTATCTCCACTTGGGCTGGGGGCCGTCCATAAGACTTaGTCTCTCCTATATCCTTCTTGTTCAGAGACTCCAGGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: PASLSPLGLGAVHKT*SLLYPSCSETPGPS
Trigger: AGAAGGCCCTGGAGTCTCTGAACAAGAAGGATATAGGAGAGATCAAGTCTTATGGACGGCCCCCAGCCCAAGTGGAGATAGTGATGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575105.1
CDS GCA 90 bp AAACTGCACAGTTGCCTCGAAGTTCTCCCAGGTGATGGGAACTGGTaGTTGGCGAATGAAGTAGACAAGCTGGTTCTGGGTCTGTACAGG +
Preference number: 5 (lower is better)
Translates to: KLHSCLEVLPGDGNW*LANEVDKLVLGLYR
Trigger: CCTGTACAGACCCAGAACCAGCTTGTCTACTTCATTCGCCAAGCACCAGTTCCCATCACCTGGGAGAACTTCGAGGCAACTGTGCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 90 bp CTCTTTGTCCTTTATCACCATCTCAGGCTTCATGTTCATGGCCTCTaGAGGGATGTAGAGGACCGTGTGCCCCTCCAGTTTGTACCGAGT +
Preference number: 5 (lower is better)
Translates to: LFVLYHHLRLHVHGL*RDVEDRVPLQFVPS
Trigger: ACTCGGTACAAACTGGAGGGGCACACGGTCCTCTACATCCCTGCAGAGGCCATGAACATGAAGCCTGAGATGGTGATAAAGGACAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 90 bp TTGTTCTGCCATTCATTGCAGTGCTGCACCAGGGAGAACTTGAGGTaGGAACAGTCCAGCAGCACAAACTGGATGTTGGTGACTGTCTCC +
Preference number: 5 (lower is better)
Translates to: LFCHSLQCCTRENLR*EQSSSTNWMLVTVS
Trigger: GGAGACAGTCACCAACATCCAGTTTGTGCTGCTGGACTGTTCGCACCTCAAGTTCTCCCTGGTGCAGCACTGCAATGAATGGCAGAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS GCA 90 bp TCAGCCACCTTCTTCTTGGCATCCTCCAGCTCCAACGACATCACTTaGACCTTTTCCCTAGTTTCGTCGATCTTGAACAAGCCTGTCCGC +
Preference number: 5 (lower is better)
Translates to: SATFFLASSSSNDIT*TFSLVSSILNKPVR
Trigger: GCGGACAGGCTTGTTCAAGATCGACGAAACTAGGGAAAAGGTGCAAGTGATGTCGTTGGAGCTGGAGGATGCCAAGAAGAAGGTGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp TTTATGAAAGATGTCCTCAATCTCCAGCAAGTTCCGTGTTATCTGTaGCCCCTGGGCACCAAAGAAGCAAGGAAGGGGACCCTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: FMKDVLNLQQVPCYL*PLGTKEARKGTLLA
Trigger: GGCAAGCAGGGTCCCCTTCCTTGCTTCTTTGGTGCCCAGGGGCCACAGATAACACGGAACTTGCTGGAGATTGAGGACATCTTTCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 90 bp TCTCCAGGACACTGTCCTCGACTGGCACCTCGTACTTTTCAAGAATaGCAAATTGCTCGTGTATGGGAGGGATCTGAGTCTCCACGTTGG +
Preference number: 5 (lower is better)
Translates to: SPGHCPRLAPRTFQE*QIARVWEGSESPRW
Trigger: CCAACGTGGAGACTCAGATCCCTCCCATACACGAGCAATTTGCCATTCTTGAAAAGTACGAGGTGCCAGTCGAGGACAGTGTCCTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTCCCAAACTGCACAGTaGCCTCGAAGTTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSSQTAQ*PRSSPR
Trigger: CCTGGGAGAACTTCGAGGCAACTGTGCAGTTTGGGA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTAGGTCCATGCATCGGTaGCGCCAGAACTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSRSMHR*RQNSIS
Trigger: GGAGATTGAGTTCTGGCGCAACCGATGCATGGACCT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTAGGGACTTGTCAAAGTaGACATCCAGCATGCCCGCC +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSRDLSK*TSSMPA
Trigger: GGCGGGCATGCTGGATGTCAACTTTGACAAGTCCCT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTGCACCAGGGAGAACTaGAGGTGCGAACAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSCTREN*RCEQSS
Trigger: GCTGGACTGTTCGCACCTCAAGTTCTCCCTGGTGCA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATAGTCCAGCAGAGTTTGTaGGAAGACAACCCACTCCCC +
Preference number: 5 (lower is better)
Translates to: SHCWSGWKRVCLPVREFIVQQSL*EDNPLP
Trigger: GGGGAGTGGGTTGTCTTCCAACAAACTCTGCTGGAC...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp GTACGTGCATTTGTCCCTTCTCTCATCGCTCCAGGCCACCATGGTCCCAGGTACTGGATCAGGCCTGTCTaGAATTTCTCCTTGTGTTTC +
Preference number: 5 (lower is better)
Translates to: VRAFVPSLIAPGHHGPRYWIRPV*NFSLCF
Trigger: GAAACACAAGGAGAAATTCAAGACAGGCCTGATCCA...GTACCTGGGACCATGGTGGCCTGGAGCGATGAGAGAAGGGACAAATGCACGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp AACTCCCGCTGGATCTCATCCCGGACCTGGTCCCAGTGCCTCTCTCTAAGGGCAGGGAAAATATGTCGCTaGGTCTCTAAATACATATCC +
Preference number: 5 (lower is better)
Translates to: NSRWISSRTWSQCLSLRAGKICR*VSKYIS
Trigger: GGATATGTATTTAGAGACCAAGCGACATATTTTCCC...TGCCCTTAGAGAGAGGCACTGGGACCAGGTCCGGGATGAGATCCAGCGGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTGCTGTCAGCAGGCACTaGGTGACATCAGCCGTCCAC +
Preference number: 5 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLAVSRH*VTSAVH
Trigger: GTGGACGGCTGATGTCACCAAGTGCCTGCTGACAGC...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp CCTGCCCAACCTTGGTCCCACTCTGCAGCCTGGGTCACACAGCCCTCCATTCTCAATACTTATTCAGGATaGACACCTGGTTCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: PAQPWSHSAAWVTQPSILNTYSG*TPGSSS
Trigger: TGAAGAAGAACCAGGTGTCAATCCTGAATAAGTATT...GAGAATGGAGGGCTGTGTGACCCAGGCTGCAGAGTGGGACCAAGGTTGGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp AGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTGCGCCAGAATCTTGCAGTaGCCAAAGCCCTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: RQLNVGKQILHDGIEQGCARILQ*PKPSPK
Trigger: CTTTGGAGAGGGCTTTGGCAACTGCAAGATTCTGGC...GCACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp AAAGGGTGTGCTTGCCAGTCCGTGAATTCATACCTCTGGGTGCACAAACGAGGGACAGGCAGCTCAATGTaGGGAAACAGATCTTGCACG +
Preference number: 5 (lower is better)
Translates to: KGCACQSVNSYLWVHKRGTGSSM*GNRSCT
Trigger: CGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTGT...CCCTCGTTTGTGCACCCAGAGGTATGAATTCACGGACTGGCAAGCACACCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp AAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCACCAGAGCCACAATGGTGAACGGCGTGCTTaGCAGGCCCATGTCTCGAAT +
Preference number: 5 (lower is better)
Translates to: KLLQHIPGMNFYRHQSHNGERRA*QAHVSN
Trigger: ATTCGAGACATGGGCCTGCAAAGCACGCCGTTCACC...ATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATGGCCGGAGAGGCCATaGCCAGGTCCTCCACTTCAA +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQWPERP*PGPPLQ
Trigger: TTGAAGTGGAGGACCTGGCAATGGCCTCTCCGGCCA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTCTGTGCGGACATGTaGACAACGAGCACCGACCAC +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSVCADM*TTSTDH
Trigger: GTGGTCGGTGCTCGTTGTCAACATGTCCGCACAGAC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACGCTGTACCACGGTGTaGTACATGTCCAGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQRCTTV*YMSRVA
Trigger: GGCCACCCTGGACATGTACAACACCGTGGTACAGCG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCCACCAGGAGCATGTaGCCCCGAGGCTGTCCAATG +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRPTRSM*PRGCPM
Trigger: CATTGGACAGCCTCGGGGCAACATGCTCCTGGTGGG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCATGAAGGACGTGGTCTaGAGCTCCACCCCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGMKDVV*SSTPAW
Trigger: CCAGGCTGGGGTGGAGCTCAAGACCACGTCCTTCAT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACACATGCAGAGGGACTaGGCAGCCAGGGAGACGCGG +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITHMQRD*AARETR
Trigger: CCGCGTCTCCCTGGCTGCCAAGTCCCTCTGCATGTG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCGCGCCAAGTCAGTGTaGATCTCTGTGGTCTCACTG +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSERAKSV*ISVVSL
Trigger: CAGTGAGACCACAGAGATCAACACTGACTTGGCGCG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTTCTCCGGGGCAGCATaGGTATACCACAGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSFSGAA*VYHRCQ
Trigger: CTGGCACCTGTGGTATACCAATGCTGCCCCGGAGAA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAAGCGGGAGCCAAGGTaGGTGATGATGAAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEKREPR*VMMKEV
Trigger: GACCTCCTTCATCATCACCAACCTTGGCTCCCGCTT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTGGCCTTTAGGCCCTTaGGTGGCTCTGTGGTCATCT +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSWPLGP*VALWSS
Trigger: AGATGACCACAGAGCCACCAAAGGGCCTAAAGGCCA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGAGGCCACATCAGCATaGGGGTGCTGGCCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWEATSA*GCWPKA
Trigger: GGCCTTTGGCCAGCACCCCAATGCTGATGTGGCCTC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCCCTTGGCGCTCTTCTaGCGGCTCTCTGCAGGCCGG +
Preference number: 5 (lower is better)
Translates to: FTFMANTTRYLQGHITQIPLALF*RLSAGR
Trigger: CCGGCCTGCAGAGAGCCGCAAGAAGAGCGCCAAGGG...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACCCTTGGCGCTCTTCTaGCGGCTCTCTGCAGGCCGG +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATPLALF*RLSAGR
Trigger: CCGGCCTGCAGAGAGCCGCAAGAAGAGCGCCAAGGG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACAGGAGTACATGCCCTaGGCGCTCTTCTTGCGGCTC +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQQEYMP*ALFLRL
Trigger: GAGCCGCAAGAAGAGCGCCAAGGGCATGTACTCCTG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACACTGTACTTGTCAAAGTaGACATCCAGCATGCCCGCC +
Preference number: 5 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATLYLSK*TSSMPA
Trigger: GGCGGGCATGCTGGATGTCAACTTTGACAAGTACAG...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp GTTACCCAAGTACTCATAATTATACTGAAATTGCGTGTTGGTCTGGCGGATGACCCCACCTGCCCAACCTaGGTCCCACTCTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: VTQVLIIILKLRVGLADDPTCPT*VPLCSL
Trigger: CAGGCTGCAGAGTGGGACCAAGGTTGGGCAGGTGGG...GTCATCCGCCAGACCAACACGCAATTTCAGTATAATTATGAGTACTTGGGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp GAGTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACCCTAGGGACAATGCCTaGGGGTTCAAAGGGAACTCC +
Preference number: 5 (lower is better)
Translates to: EWREFLVSYNWKTLVRVNPRDNA*GFKGNS
Trigger: GGAGTTCCCTTTGAACCCCAAGGCATTGTCCCTAGG...GTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCGCCCCGCAGGACATaGAAAAGGCAGGGAGAACCC +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRPPRRT*KRQGEP
Trigger: GGGTTCTCCCTGCCTTTTCAATGTCCTGCGGGGCGG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS GCA 90 bp GAAAAGAGGTGGTTGCCAATGTCATTGACCACACCTGCCAAAGTCTaGAGAGTGGGTGAGAATTCCACCTGTGCCACACTTCCTTGCAGA +
Preference number: 5 (lower is better)
Translates to: EKRWLPMSLTTPAKV*RVGENSTCATLPCR
Trigger: TCTGCAAGGAAGTGTGGCACAGGTGGAATTCTCACCCACTCTGCAGACTTTGGCAGGTGTGGTCAATGACATTGGCAACCACCTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 90 bp TGTGACATGTCCACCATAGTTGATGCCGGCAATGAGGTACTTAAGTaGGTCCCAAGGTGTCTCCTCGTACTCATCGAGATAGAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: CDMSTIVDAGNEVLK*VPRCLLVLIEIEAQ
Trigger: CTGAGCCTCTATCTCGATGAGTACGAGGAGACACCTTGGGACGCACTTAAGTACCTCATTGCCGGCATCAACTATGGTGGACATGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 90 bp TCCAACCGCCGAATGCAATCCTTGTCCAGACTTGATGTCCACTCTTaGAAGGTTTTTCGAACCAGCTCATCAATGGCCTGGACCATCTGC +
Preference number: 5 (lower is better)
Translates to: SNRRMQSLSRLDVHS*KVFRTSSSMAWTIC
Trigger: GCAGATGGTCCAGGCCATTGATGAGCTGGTTCGAAAAACCTTCCAAGAGTGGACATCAAGTCTGGACAAGGATTGCATTCGGCGGTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
ENST00000575498.1
CDS CCA 90 bp TGCACCAGGGAGAACTTGAGGTGCGAACAGTCCAGCAGCACAAACTaGATGTTGGTGACTGTCTCCTCCTTCTGCACGTTATTAGCAACT +
Preference number: 5 (lower is better)
Translates to: CTRENLRCEQSSSTN*MLVTVSSFCTLLAT
Trigger: AGTTGCTAATAACGTGCAGAAGGAGGAGACAGTCACCAACATCCAGTTTGTGCTGCTGGACTGTTCGCACCTCAAGTTCTCCCTGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS-3UTR CAA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTGCTTCTTCTCAGCTTaGCTGGACATCGTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: QLGISRATSHKFGQGQSLCFFSA*LDIVQA
Trigger: TGCCTGCACGATGTCCAGCAAAGCTGAGAAGAAGCA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTTCTTCACTCTGTGCTaGAGGTCCCTCCAACCGTGG +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSFFTLC*RSLQPW
Trigger: CCACGGTTGGAGGGACCTCAAGCACAGAGTGAAGAA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACAGATGGGAACTGGTGCTaGGCGAATGAAGTAGACAAG +
Preference number: 5 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATDGNWC*ANEVDK
Trigger: CTTGTCTACTTCATTCGCCAAGCACCAGTTCCCATC...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTCCCAAACTGCACAGTaGCCTCGAAGTTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSSQTAQ*PRSSPR
Trigger: CCTGGGAGAACTTCGAGGCAACTGTGCAGTTTGGGA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGATCAGCTTAGGGAGCTaGCTAGAGATGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEISLGS*LEMSLG
Trigger: GCCCAAGGACATCTCTAGCAAGCTCCCTAAGCTGAT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTGCCAACAGGTGTTCTaGACATCCAGGATACCCCCG +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSCQQVF*TSRIPP
Trigger: CGGGGGTATCCTGGATGTCAAGAACACCTGTTGGCA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGATCACCTCCAGGTCCTaGATTCCGGCACGGAACTTA +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEITSRS*IPARNL
Trigger: TAAGTTCCGTGCCGGAATCAAGGACCTGGAGGTGAT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCGCCGAATGCAATCCTaGTCCAGACTTGATGTCCAC +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSRRMQS*SRLDVH
Trigger: GTGGACATCAAGTCTGGACAAGGATTGCATTCGGCG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTCCCTGTATACCCGTTaGCCACTAATGCGTACCAGC +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSSLYTR*PLMRTS
Trigger: GCTGGTACGCATTAGTGGCAAACGGGTATACAGGGA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCTTGGAAGAGTGGGTTaGGGCTGGTCTTTCCATCCC +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSLGRVG*GWSFHP
Trigger: GGGATGGAAAGACCAGCCCAAACCCACTCTTCCAAG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCGATGTAACTTGCGCTaGGTGAGAATGTCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSRCNLR*VRMSGR
Trigger: CCTCCCTGACATTCTCACCAAGCGCAAGTTACATCG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATGCAGCAGGCTTGCGTaGTTAGTCATGCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQCSRLA*LVMPLL
Trigger: CAGCAGCGGCATGACTAACAACGCAAGCCTGCTGCA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CCGGGCATGAATTTCTATCGTCACCAGAGCCACAATTTTAAGCCGCATGATCTTTGCAGCAGGCTTGCGTaGTTAGTCATGCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PGMNFYRHQSHNFKPHDLCSRLA*LVMPLL
Trigger: CAGCAGCGGCATGACTAACAACGCAAGCCTGCTGCA...AAGATCATGCGGCTTAAAATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCACAACCCACTCCCCGTaGAGACTGTCCAGCATCTCC +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGTTHSP*RLSSIS
Trigger: GGAGATGCTGGACAGTCTCAACGGGGAGTGGGTTGT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CCGGGCATGAATTTCTATCGTCACCAGAGCCACAATTTTAAGCCGCATGATCTTTGCGATCTCCCAGATTaGCTGGAGGGCATCGAGCTC +
Preference number: 5 (lower is better)
Translates to: PGMNFYRHQSHNFKPHDLCDLPD*LEGIEL
Trigger: GAGCTCGATGCCCTCCAGCAAATCTGGGAGATCGCA...AAGATCATGCGGCTTAAAATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp AGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTGCAATAAGGTCGATTCATaGGGCAGCTGCTTGCGGATG +
Preference number: 5 (lower is better)
Translates to: RQLNVGKQILHDGIEQGCNKVDS*GSCLRM
Trigger: CATCCGCAAGCAGCTGCCCAATGAATCGACCTTATT...GCACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCTCCGGAGAGCATTGTaGTCCTTGTTCATCCTGTCC +
Preference number: 5 (lower is better)
Translates to: QLGISRATSHKFGQGQSLLRRAL*SLFILS
Trigger: GGACAGGATGAACAAGGACAACAATGCTCTCCGGAG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATACATTTGTCCCTCTTGTaGAGGAACTTCCTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: SHCWSGWKRVCLPVREFIHLSLL*RNFLRA
Trigger: GGCCCTCAGGAAGTTCCTCAACAAGAGGGACAAATG...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTGAACGGCGTGCTTaGCAGGCCCATGTCTCGAAT +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQGERRA*QAHVSN
Trigger: ATTCGAGACATGGGCCTGCAAAGCACGCCGTTCACC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCCTAGGGACAATGCCTaGGGGTTCAAAGGGAACTCT +
Preference number: 5 (lower is better)
Translates to: QLGISRATSHKFGQGQSLPRDNA*GFKGNS
Trigger: AGAGTTCCCTTTGAACCCCAAGGCATTGTCCCTAGG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGACCAGCTCCTTGCAGTaGTCCTTCTTAAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: QLGISRATSHKFGQGQSLTSSLQ*SFLKAS
Trigger: GCTGGCCTTTAAGAAGGACAACTGCAAGGAGCTGGT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGATGCCCTGGAACACCTaGGAGATGTCTCGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: QLGISRATSHKFGQGQSLMPWNT*EMSRRL
Trigger: CAACCTTCGAGACATCTCCAAGGTGTTCCAGGGCAT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCATCACTATCTCCACTaGGGCTGGGGGCCGTCCATA +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGHHYLH*GWGPSI
Trigger: TATGGACGGCCCCCAGCCCAAGTGGAGATAGTGATG...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGCCCATGTGGGCTCGTaGCCTCGAAGAATCATAACT +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSAHVGS*PRRIIT
Trigger: AGTTATGATTCTTCGAGGCAACGAGCCCACATGGGC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTCCAGTCCCGGACTTaGGTAGGATTGCACAGGAAG +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEFQSRT*VGLHRK
Trigger: CTTCCTGTGCAATCCTACCAAAGTCCGGGACTGGAA...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCGGGCTACAGATTTGTaGAGCATGGGGTTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSRATDL*SMGFSV
Trigger: CACACTGAACCCCATGCTCAACAAATCTGTAGCCCG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTCATCCTCCAGCTCCTaGAGCTTCCTTTTACCAGCC +
Preference number: 5 (lower is better)
Translates to: QLGISRATSHKFGQGQSLSSSSS*SFLLPA
Trigger: GGCTGGTAAAAGGAAGCTCAAGGAGCTGGAGGATGA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCAGCTACTACATGGATaGTCCATTTGGCCCTCCCGA +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEQLLHG*SIWPSR
Trigger: TCGGGAGGGCCAAATGGACAATCCATGTAGTAGCTG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGTGGGGATCGTGGGGTaGAATCCTCCAGCACCGACT +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRVGIVG*NPPAPT
Trigger: AGTCGGTGCTGGAGGATTCAACCCCACGATCCCCAC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCTGCTCCACCAGCTaGTCCAGATTAGGCATCCAA +
Preference number: 5 (lower is better)
Translates to: QLGISRATSHKFGQGQSLSCSTS*SRLGIQ
Trigger: TTGGATGCCTAATCTGGACAAGCTGGTGGAGCAGCT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTGGCCTTTAGGCCCTTaGGTGGCTCTGTGGTCATCT +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSWPLGP*VALWSS
Trigger: AGATGACCACAGAGCCACCAAAGGGCCTAAAGGCCA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGGGGGATACACTAGGTaGCTGTCATCCACAGTGGAA +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSGGYTR*LSSTVE
Trigger: TTCCACTGTGGATGACAGCAACCTAGTGTATCCCCC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCCCGCTGGATCTCATCCCGGACCTGGTCCCAGTGCCTCTCTCTAAGGGCATTCAAGGTTGTCCTTTaGAAAAATCACTCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: NSRWISSRTWSQCLSLRAFKVVL*KNHSLA
Trigger: AGCAAGAGAGTGATTTTTCAAAAGGACAACCTTGAA...TGCCCTTAGAGAGAGGCACTGGGACCAGGTCCGGGATGAGATCCAGCGGGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS TCA 90 bp CAGCAATGGGGTATCCAACCGCCGAATGCAATCCTTGTCCAGACTTaGTGTCCACTCTTGGAAGGTTTTTCGAACCAGCTCATCAATGGC +
Preference number: 5 (lower is better)
Translates to: QQWGIQPPNAILVQT*CPLLEGFSNQLING
Trigger: GCCATTGATGAGCTGGTTCGAAAAACCTTCCAAGAGTGGACATCAAGTCTGGACAAGGATTGCATTCGGCGGTTGGATACCCCATTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
ENST00000575498.1
CDS GCA 90 bp ATGAGAAGCAAAATGATTTCTAATGCTCTCAGGCCAGCCTGTGTTTaGAAAGATCTGAGGGGCAAAGACTCCACCGAGCAGCCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: MRSKMISNALRPACV*KDLRGKDSTEQPKQ
Trigger: CTGCTTCGGCTGCTCGGTGGAGTCTTTGCCCCTCAGATCTTTGCAAACACAGGCTGGCCTGAGAGCATTAGAAATCATTTTGCTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 90 bp ACATCCTGGTGCAGGTTCATCAATTTCTGCTGTACAGCTGCCCGATaGTCTCTTTGGTCCTCTTCAAATTCCAGGTCCCTGTATACCCGT +
Preference number: 5 (lower is better)
Translates to: TSWCRFINFCCTAAR*SLWSSSNSRSLYTR
Trigger: ACGGGTATACAGGGACCTGGAATTTGAAGAGGACCAAAGAGAGCATCGGGCAGCTGTACAGCAGAAATTGATGAACCTGCACCAGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 90 bp ACGATCCGTGTGATGTGTTCAATAGCCTCTCGGAAGAGCACTAGCTaGATGGGCACGACAGAGGGTGACAGGTTATACTCATTTAGAGCT +
Preference number: 5 (lower is better)
Translates to: TIRVMCSIASRKSTS*MGTTEGDRLYSFRA
Trigger: AGCTCTAAATGAGTATAACCTGTCACCCTCTGTCGTGCCCATGCAGCTAGTGCTCTTCCGAGAGGCTATTGAACACATCACACGGATCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp GACTTGATGTCCACTCTTGGAAGGTTTTTCGAACCAGCTCATCAATaGCCTGGACCATCTGCTGATAGGTGTGCACACTCTCCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: DLMSTLGRFFEPAHQ*PGPSADRCAHSPFQ
Trigger: CTGGAAAGGAGAGTGTGCACACCTATCAGCAGATGGTCCAGGCCATTGATGAGCTGGTTCGAAAAACCTTCCAAGAGTGGACATCAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
ENST00000575498.1
CDS CCA 90 bp TCCTTGTGTTTCTTCAGCATTTGCTTACTGTCCAGCAGAGTTTGTTaGAAGACAACCCACTCCCCGTTGAGACTGTCCAGCATCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SLCFFSICLLSSRVC*KTTHSPLRLSSISR
Trigger: CCTGGAGATGCTGGACAGTCTCAACGGGGAGTGGGTTGTCTTCCAACAAACTCTGCTGGACAGTAAGCAAATGCTGAAGAAACACAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CCA 90 bp AAACATTCATGGATCCAGAGCCGTGTGATGCTGGACTTGGTATCATaGAAGTCCTTGTTGGCTCTAAGCATGCCCTGGAACACCTTGGAG +
Preference number: 5 (lower is better)
Translates to: KHSWIQSRVMLDLVS*KSLLALSMPWNTLE
Trigger: CTCCAAGGTGTTCCAGGGCATGCTTAGAGCCAACAAGGACTTCCATGATACCAAGTCCAGCATCACACGGCTCTGGATCCATGAATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp GATATTCCTGCACGTTCTGAAGTAGCACCGGGTATCCAAAGTGAATaGCGTGTTCTAGGATTCGCAGGTAATCGCTCATCTGCAGGTCGA +
Preference number: 5 (lower is better)
Translates to: DIPARSEVAPGIQSE*RVLGFAGNRSSAGR
Trigger: TCGACCTGCAGATGAGCGATTACCTGCGAATCCTAGAACACGCCATTCACTTTGGATACCCGGTGCTACTTCAGAACGTGCAGGAATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS-3UTR CAA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTGGCTCAGGCTCCTCCTaGGGGAGCTCAGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFGSGSS*GSSACS
Trigger: GCTGCAGGCTGAGCTCCCCAAGGAGGAGCCTGAGCC...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp CTAGTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGTTCTTCACTCTGTGCTaGAGGTCCCTCCAACCGTGG +
Preference number: 5 (lower is better)
Translates to: LVAEQRHHWFSQIVEWFLFFTLC*RSLQPW
Trigger: CCACGGTTGGAGGGACCTCAAGCACAGAGTGAAGAA...CAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCACTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGTGTGCCCCTCCAGTTaGTACCGAGTGTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWVCPSS*YRVSVR
Trigger: CCTGACAGACACTCGGTACAAACTGGAGGGGCACAC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTGTGTGCCCCTCCAGTTaGTACCGAGTGTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLIVCPSS*YRVSVR
Trigger: CCTGACAGACACTCGGTACAAACTGGAGGGGCACAC...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp CTAGTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGTGCCAACAGGTGTTCTaGACATCCAGGATACCCCCG +
Preference number: 5 (lower is better)
Translates to: LVAEQRHHWFSQIVEWFLCQQVF*TSRIPP
Trigger: CGGGGGTATCCTGGATGTCAAGAACACCTGTTGGCA...CAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCACTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGACAATCATCTGCACCTaGCTGGCATGTATACGGCAC +
Preference number: 5 (lower is better)
Translates to: QLGISRATSHKFGQGQSLTIICT*LACIRH
Trigger: GTGCCGTATACATGCCAGCAAGGTGCAGATGATTGT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTGGTTGCCAATGTCATaGACCACACCTGCCAAAGTC +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSWLPMS*TTPAKV
Trigger: GACTTTGGCAGGTGTGGTCAATGACATTGGCAACCA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTGCAGCAGGCTTGCGTaGTTAGTCATGCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRCSRLA*LVMPLL
Trigger: CAGCAGCGGCATGACTAACAACGCAAGCCTGCTGCA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTTGAAGATGCCCAGGTaGGCTCGGAGACTATTTTCC +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSLKMPR*ARRLFS
Trigger: GGAAAATAGTCTCCGAGCCAACCTGGGCATCTTCAA...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGGTGGCTGCTCGATCTaGAAGATGCCCAGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRGGCSI*KMPRLA
Trigger: AGCCAACCTGGGCATCTTCAAGATCGAGCAGCCACC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTGCGATCTCCCAGATTaGCTGGAGGGCATCGAGCTC +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWCDLPD*LEGIEL
Trigger: GAGCTCGATGCCCTCCAGCAAATCTGGGAGATCGCA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTCATTGGGCAGCTGCTaGCGGATGTCTTCTCCTAGG +
Preference number: 5 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLSLGSC*RMSSPR
Trigger: CCTAGGAGAAGACATCCGCAAGCAGCTGCCCAATGA...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp GTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGGTTGTCAAAGCATTTTTaGAGGTGTGGCTGCACAGCC +
Preference number: 5 (lower is better)
Translates to: VAGVLGFIQLENLGEGERLSKHF*RCGCTA
Trigger: GGCTGTGCAGCCACACCTCAAAAAATGCTTTGACAA...CCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTACCCATTTGTCCCTCTaGTTGAGGAACTTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSTHLSL*LRNFLR
Trigger: CCTCAGGAAGTTCCTCAACAAGAGGGACAAATGGGT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGACCCATTTGTCCCTCTaGTTGAGGAACTTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSETHLSL*LRNFLR
Trigger: CCTCAGGAAGTTCCTCAACAAGAGGGACAAATGGGT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCACTCCTTCACCCATTaGTCCCTCTTGTTGAGGAAC +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEHSFTH*SLLLRN
Trigger: GTTCCTCAACAAGAGGGACAAATGGGTGAAGGAGTG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTACCTTGAGGATTTTCTaGTCTGCCCGCTCCTTCGCT +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSTLRIF*SARSFA
Trigger: AGCGAAGGAGCGGGCAGACAAGAAAATCCTCAAGGT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTTAAGCCGCATGATCTaGGTCAAGTTCCCCCTGATG +
Preference number: 5 (lower is better)
Translates to: QLGISRATSHKFGQGQSLLSRMI*VKFPLM
Trigger: CATCAGGGGGAACTTGACCAAGATCATGCGGCTTAA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GCAGTTGCCAAAGCCCTCTCCAAAGAGAATGATTTCTGCAATGAGGGTGGAGTCTTAAGCCGCATGATCTaGGTCAAGTTCCCCCTGATG +
Preference number: 5 (lower is better)
Translates to: AVAKALSKENDFCNEGGVLSRMI*VKFPLM
Trigger: CATCAGGGGGAACTTGACCAAGATCATGCGGCTTAA...GACTCCACCCTCATTGCAGAAATCATTCTCTTTGGAGAGGGCTTTGGCAACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCCAGAATCTTGCAGTaGCCAAAGCCCTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSARILQ*PKPSPK
Trigger: CTTTGGAGAGGGCTTTGGCAACTGCAAGATTCTGGC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGACAGGCAGCTCAATGTaGGGAAACAGATCTTGCACG +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSETGSSM*GNRSCT
Trigger: CGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTGT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGGTGAACGGCGTGCTTaGCAGGCCCATGTCTCGAAT +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWGERRA*QAHVSN
Trigger: ATTCGAGACATGGGCCTGCAAAGCACGCCGTTCACC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTACAACTGGAAAACCTaGGTGAGGGTGAACGGCGTG +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSYNWKT*VRVNGV
Trigger: CACGCCGTTCACCCTCACCAAGGTTTTCCAGTTGTA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGCGATGCGCTCGCCGTaGATGAGGGTCAACACCTTG +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITAMRSP*MRVNTL
Trigger: CAAGGTGTTGACCCTCATCAACGGCGAGCGCATCGC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTATACCGTGTCCTTATaGGGAAAGGAGCCCTCGATC +
Preference number: 5 (lower is better)
Translates to: QLGISRATSHKFGQGQSLYTVSL*GKEPSI
Trigger: GATCGAGGGCTCCTTTCCCAATAAGGACACGGTATA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAAGAATGGGATTCTGGTaGGCCACCAAGCTGCTCACC +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQRMGFW*ATKLLT
Trigger: GGTGAGCAGCTTGGTGGCCAACCAGAATCCCATTCT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCGTGTGATGCTGGACTaGGTATCATGGAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSERVMLD*VSWKSL
Trigger: CAAGGACTTCCATGATACCAAGTCCAGCATCACACG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACCCACCAGGAGCATGTaGCCCCGAGGCTGTCCAATG +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATPTRSM*PRGCPM
Trigger: CATTGGACAGCCTCGGGGCAACATGCTCCTGGTGGG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCCTGAGCTGAGGATGTaGTTGATGTCCTCTAGGAAG +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSPELRM*LMSSRK
Trigger: CTTCCTAGAGGACATCAACAACATCCTCAGCTCAGG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCTAGTTTCGTCGATCTaGAACAAGCCTGTCCGCAGT +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSELVSSI*NKPVRS
Trigger: ACTGCGGACAGGCTTGTTCAAGATCGACGAAACTAG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCATCACTATCTCCACTaGGGCTGGGGGCCGTCCATA +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRHHYLH*GWGPSI
Trigger: TATGGACGGCCCCCAGCCCAAGTGGAGATAGTGATG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTTGACGATGGTGGTCTaGGCTGAGGTCTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRLTMVV*AEVSGL
Trigger: CAGCCCAGAGACCTCAGCCAAGACCACCATCGTCAA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTTACCAGCCGCGATGTaGATGACCAGTGAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSLPAAM*MTSESF
Trigger: GAAGGACTCACTGGTCATCAACATCGCGGCTGGTAA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACGGTCCTCCAGCTTATaGCTGCGGTGGCTTTTGTCA +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQRSSSL*LRWLLS
Trigger: TGACAAAAGCCACCGCAGCAATAAGCTGGAGGACCG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTACATGGATTGTCCATTaGGCCCTCCCGATCCAAGAC +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSTWIVH*ALPIQD
Trigger: GTCTTGGATCGGGAGGGCCAAATGGACAATCCATGT...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTAGCAGCTTCTTATATTaGGCAGGTTTGGAGCAGCGG +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSSSFLY*AGLEQR
Trigger: CCGCTGCTCCAAACCTGCCAAATATAAGAAGCTGCT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGTCTGCATCAGTGTGTaGTATCTCTGGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSVCISV*YLWISC
Trigger: GCAGGAGATCCAGAGATACAACACACTGATGCAGAC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTCTGTCCACTGAAACGTaGTTTTGGCGAGCTGAAGAC +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSLSTET*FWRAED
Trigger: GTCTTCAGCTCGCCAAAACAACGTTTCAGTGGACAG...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACAAAGCGGATGATCTCATaGCTCATCTTTCGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATKRMIS*LIFRKS
Trigger: GCTCTTCCGAAAGATGAGCAATGAGATCATCCGCTT...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS GCA 90 bp TTGGTCATGATGGTCACCACATCCTGGTGCAGGTTCATCAATTTCTaGTGTACAGCTGCCCGATGCTCTCTTTGGTCCTCTTCAAATTCC +
Preference number: 5 (lower is better)
Translates to: LVMMVTTSWCRFINF*CTAARCSLWSSSNS
Trigger: GGAATTTGAAGAGGACCAAAGAGAGCATCGGGCAGCTGTACAGCAGAAATTGATGAACCTGCACCAGGATGTGGTGACCATCATGACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 90 bp TTTCTGGGCATTGTCAGCCAGTGCCTGACACTTGATTTCCTCAACTaGAATCTTTTCACTGTTGGCTGTTACGGCCTTCTGCTGCTCATC +
Preference number: 5 (lower is better)
Translates to: FLGIVSQCLTLDFLN*NLFTVGCYGLLLLI
Trigger: GATGAGCAGCAGAAGGCCGTAACAGCCAACAGTGAAAAGATTGCAGTTGAGGAAATCAAGTGTCAGGCACTGGCTGACAATGCCCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp AAACAAGGGTCAATGAAGATGGTGAGGATGGATTCTGTAGGGTCCTaGGCAAAGTGTTCCAGAATGGCATCATGCTCCTGTGTCCACACT +
Preference number: 5 (lower is better)
Translates to: KQGSMKMVRMDSVGS*AKCSRMASCSCVHT
Trigger: AGTGTGGACACAGGAGCATGATGCCATTCTGGAACACTTTGCCCAGGACCCTACAGAATCCATCCTCACCATCTTCATTGACCCTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 90 bp TGCAGGTTCATCAATTTCTGCTGTACAGCTGCCCGATGCTCTCTTTaGTCCTCTTCAAATTCCAGGTCCCTGTATACCCGTTTGCCACTA +
Preference number: 5 (lower is better)
Translates to: CRFINFCCTAARCSL*SSSNSRSLYTRLPL
Trigger: TAGTGGCAAACGGGTATACAGGGACCTGGAATTTGAAGAGGACCAAAGAGAGCATCGGGCAGCTGTACAGCAGAAATTGATGAACCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp TGTGCCACACTTCCTTGCAGATCATTCTTCAAAATGACAAGGACTTaGAAGAGTGGGTTTGGGCTGGTCTTTCCATCCCCGTTGATAGCC +
Preference number: 5 (lower is better)
Translates to: CATLPCRSFFKMTRT*KSGFGLVFPSPLIA
Trigger: GGCTATCAACGGGGATGGAAAGACCAGCCCAAACCCACTCTTCCAAGTCCTTGTCATTTTGAAGAATGATCTGCAAGGAAGTGTGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp AAGGCCTTGACAAAGCGTGATGCCTTCATGGTAGACAGAGCTACCTaGTTATCTTCCAGTGCCTGGAATACTTCTTCTGTACCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: KALTKRDAFMVDRAT*LSSSAWNTSSVPLS
Trigger: GCTCAGAGGTACAGAAGAAGTATTCCAGGCACTGGAAGATAACCAGGTAGCTCTGTCTACCATGAAGGCATCACGCTTTGTCAAGGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp CTGAGGATGTTGTTGATGTCCTCTAGGAAGGACTCATCAGCTATTTaGGTGTCCACAAAAATGAAGGACGTGGTCTTGAGCTCCACCCCA +
Preference number: 5 (lower is better)
Translates to: LRMLLMSSRKDSSAI*VSTKMKDVVLSSTP
Trigger: TGGGGTGGAGCTCAAGACCACGTCCTTCATTTTTGTGGACACCCAAATAGCTGATGAGTCCTTCCTAGAGGACATCAACAACATCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp CTAGTTTCGTCGATCTTGAACAAGCCTGTCCGCAGTTTATTGGCTTaGGCCAGCAGCTCCTGCCGTTTTTCTCCCAGCAACTTCTTATAT +
Preference number: 5 (lower is better)
Translates to: LVSSILNKPVRSLLA*ASSSCRFSPSNFLY
Trigger: ATATAAGAAGTTGCTGGGAGAAAAACGGCAGGAGCTGCTGGCCCAAGCCAATAAACTGCGGACAGGCTTGTTCAAGATCGACGAAACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp GCCTCGAAGAATCATAACTGCCTGCATCACTATCTCCACTTGGGCTaGGGGCCGTCCATAAGACTTGATCTCTCCTATATCCTTCTTGTT +
Preference number: 5 (lower is better)
Translates to: ASKNHNCLHHYLHLG*GPSIRLDLSYILLV
Trigger: AACAAGAAGGATATAGGAGAGATCAAGTCTTATGGACGGCCCCCAGCCCAAGTGGAGATAGTGATGCAGGCAGTTATGATTCTTCGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTGCTTCTTCTCAGCTTaGCTGGACATCGTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGCFFSA*LDIVQA
Trigger: TGCCTGCACGATGTCCAGCAAAGCTGAGAAGAAGCA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTTCTTCACTCTGTGCTaGAGGTCCCTCCAACCGTGG +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRFFTLC*RSLQPW
Trigger: CCACGGTTGGAGGGACCTCAAGCACAGAGTGAAGAA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTCCCAAACTGCACAGTaGCCTCGAAGTTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLISQTAQ*PRSSPR
Trigger: CCTGGGAGAACTTCGAGGCAACTGTGCAGTTTGGGA...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAGGTCCATGCATCGGTaGCGCCAGAACTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRRSMHR*RQNSIS
Trigger: GGAGATTGAGTTCTGGCGCAACCGATGCATGGACCT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATCAGCTTAGGGAGCTaGCTAGAGATGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LVAEQRHHWFSQIVEWFLISLGS*LEMSLG
Trigger: GCCCAAGGACATCTCTAGCAAGCTCCCTAAGCTGAT...CAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCATCAGCTTAGGGAGCTaGCTAGAGATGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGISLGS*LEMSLG
Trigger: GCCCAAGGACATCTCTAGCAAGCTCCCTAAGCTGAT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACGCCGAATGCAATCCTaGTCCAGACTTGATGTCCAC +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQRRMQS*SRLDVH
Trigger: GTGGACATCAAGTCTGGACAAGGATTGCATTCGGCG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTGCCCGATGCTCTCTTaGGTCCTCTTCAAATTCCAG +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSCPMLS*VLFKFQ
Trigger: CTGGAATTTGAAGAGGACCAAAGAGAGCATCGGGCA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTCCCCGTTGATAGCCTaGGATAGTTCTAGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSSPLIA*DSSSSD
Trigger: GTCACTGCTAGAACTATCCAAGGCTATCAACGGGGA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGTGGAAAAGAGGTGGTaGCCAATGTCATTGACCACA +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSVEKRW*PMSLTT
Trigger: TGTGGTCAATGACATTGGCAACCACCTCTTTTCCAC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCGATGTAACTTGCGCTaGGTGAGAATGTCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLRCNLR*VRMSGR
Trigger: CCTCCCTGACATTCTCACCAAGCGCAAGTTACATCG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGGTTCACGATGTAACTaGCGCTTGGTGAGAATGTCA +
Preference number: 5 (lower is better)
Translates to: QLGISRATSHKFGQGQSLGSRCN*RLVRMS
Trigger: TGACATTCTCACCAAGCGCAAGTTACATCGTGAACC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTGGGTCTGGATCTTCTaGATGTCCTCATCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSWVWIF*MSSSCS
Trigger: GGAGCAAGATGAGGACATCAAGAAGATCCAGACCCA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCATGCCGCTGCTGATTaGGGTCTGGATCTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSHAAAD*GLDLLD
Trigger: ATCAAGAAGATCCAGACCCAAATCAGCAGCGGCATG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GAGGCCACTCTTGTAAAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCATGCCGCTGCTGATTaGGGTCTGGATCTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: EATLVKLLQHIPGMNFYRHAAAD*GLDLLD
Trigger: ATCAAGAAGATCCAGACCCAAATCAGCAGCGGCATG...ACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTTTACAAGAGTGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATGCACCAGGGAGAACTaGAGGTGCGAACAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITCTREN*RCEQSS
Trigger: GCTGGACTGTTCGCACCTCAAGTTCTCCCTGGTGCA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTTGTTCTGCCATTCATaGCAGTGCTGCACCAGGGAG +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGLFCHS*QCCTRE
Trigger: CTCCCTGGTGCAGCACTGCAATGAATGGCAGAACAA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AGGCAGCTCAATGTTGGGAAACAGATCTTGCACGATGGCATTGAACAGGGGTGCTTCAAGAATGGCAAATaGCTCGTGTATGGGAGGGAT +
Preference number: 5 (lower is better)
Translates to: RQLNVGKQILHDGIEQGCFKNGK*LVYGRD
Trigger: ATCCCTCCCATACACGAGCAATTTGCCATTCTTGAA...GCACCCCTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAACATTGAGCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGTCCAGCAGAGTTTGTaGGAAGACAACCCACTCCCC +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWVQQSL*EDNPLP
Trigger: GGGGAGTGGGTTGTCTTCCAACAAACTCTGCTGGAC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGGCGGTCCTTATACTCTTaGGCTAATTTTGTGAGGCGA +
Preference number: 5 (lower is better)
Translates to: VAGVLGFIQLENLGEGERRSLYS*ANFVRR
Trigger: TCGCCTCACAAAATTAGCCAAAGAGTATAAGGACCG...CCGTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGCTTTCCAGTTGCTGTaGACCTGGTCAAATAAGGTC +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSAFQLL*TWSNKV
Trigger: GACCTTATTTGACCAGGTCAACAGCAACTGGAAAGC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATAGCTTTCCAGTTGCTGTaGACCTGGTCAAATAAGGTC +
Preference number: 5 (lower is better)
Translates to: SHCWSGWKRVCLPVREFIAFQLL*TWSNKV
Trigger: GACCTTATTTGACCAGGTCAACAGCAACTGGAAAGC...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp GAGGCCACTCTTGTAAAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTACCCATTTGTCCCTCTaGTTGAGGAACTTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: EATLVKLLQHIPGMNFYRTHLSL*LRNFLR
Trigger: CCTCAGGAAGTTCCTCAACAAGAGGGACAAATGGGT...ACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTTTACAAGAGTGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp CCGGGCATGAATTTCTATCGTCACCAGAGCCACAATTTTAAGCCGCATGATCTTACCTTGAGGATTTTCTaGTCTGCCCGCTCCTTCGCT +
Preference number: 5 (lower is better)
Translates to: PGMNFYRHQSHNFKPHDLTLRIF*SARSFA
Trigger: AGCGAAGGAGCGGGCAGACAAGAAAATCCTCAAGGT...AAGATCATGCGGCTTAAAATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTTAAGCCGCATGATCTaGGTCAAGTTCCCCCTGATG +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSLSRMI*VKFPLM
Trigger: CATCAGGGGGAACTTGACCAAGATCATGCGGCTTAA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTAGCCAGTCAAAGGAATaGACATCCATGAGGCCACTC +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSSQSKE*TSMRPL
Trigger: GAGTGGCCTCATGGATGTCAATTCCTTTGACTGGCT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TCTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCAGCCAGTCAAAGGAATaGACATCCATGAGGCCACTC +
Preference number: 5 (lower is better)
Translates to: SKNTEWRKSMYSPSPENISQSKE*TSMRPL
Trigger: GAGTGGCCTCATGGATGTCAATTCCTTTGACTGGCT...GATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACCAGTAGAACCGAAGTaGGCTGAGCCAGTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQPVEPK*AEPVKG
Trigger: TCCTTTGACTGGCTCAGCCAACTTCGGTTCTACTGG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAGGCCCTCAGAGCAGTaGACCACAATGACATATATG +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSERPSEQ*TTMTYM
Trigger: CATATATGTCATTGTGGTCAACTGCTCTGAGGGCCT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTTCTTGGCCAGAATCTaGCAGTTGCCAAAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSFLARI*QLPKPS
Trigger: AGAGGGCTTTGGCAACTGCAAGATTCTGGCCAAGAA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAGTGTGTACACCTTCTaGGCCAGAATCTTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSESVYTF*ARILQL
Trigger: CAACTGCAAGATTCTGGCCAAGAAGGTGTACACACT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTCTTGCACGATGGCATaGAACAGGGGTGCATCAACT +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSSCTMA*NRGAST
Trigger: AGTTGATGCACCCCTGTTCAATGCCATCGTGCAAGA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TCGCATTGTTGGAGTGGGTGGAAAAGGGTGTGCTTGCCAGTCCGTGAATTCATAGTTGGGAAACAGATCTaGCACGATGGCATTGAACAG +
Preference number: 5 (lower is better)
Translates to: SHCWSGWKRVCLPVREFIVGKQI*HDGIEQ
Trigger: CTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAAC...TATGAATTCACGGACTGGCAAGCACACCCTTTTCCACCCACTCCAACAATGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATACAACTGGAAAACCTaGGTGAGGGTGAACGGCGTG +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQYNWKT*VRVNGV
Trigger: CACGCCGTTCACCCTCACCAAGGTTTTCCAGTTGTA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACCTAGGGACAATGCCTaGGGGTTCAAAGGGAACTCT +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQPRDNA*GFKGNS
Trigger: AGAGTTCCCTTTGAACCCCAAGGCATTGTCCCTAGG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATGGCCGGAGAGGCCATaGCCAGGTCCTCCACTTCAA +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATWPERP*PGPPLQ
Trigger: TTGAAGTGGAGGACCTGGCAATGGCCTCTCCGGCCA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTTTTCGAACATGCGTaGAAGGGGCTCCACCTCAGC +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRLFEHA*KGLHLS
Trigger: GCTGAGGTGGAGCCCCTTCAACGCATGTTCGAAAAG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTATAGAAGGGGGCGTTaGGAGGGTAGCGCCAACTCT +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWYRRGR*EGSANS
Trigger: AGAGTTGGCGCTACCCTCCAAACGCCCCCTTCTATA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTATAGAAGGGGGCGTTaGGAGGGTAGCGCCAACTCT +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRYRRGR*EGSANS
Trigger: AGAGTTGGCGCTACCCTCCAAACGCCCCCTTCTATA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAGAATGGGATTCTGGTaGGCCACCAAGCTGCTCACC +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRRMGFW*ATKLLT
Trigger: GGTGAGCAGCTTGGTGGCCAACCAGAATCCCATTCT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAATGCTCTGCACGTTATaGGATGTGGTCTGTGCGGAC +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQMLCTL*DVVCAD
Trigger: GTCCGCACAGACCACATCCAATAACGTGCAGAGCAT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGGTGGGGAAGGTCATGTaGATAATGTTGAAGCGACTC +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEVGKVM*IMLKRL
Trigger: GAGTCGCTTCAACATTATCAACATGACCTTCCCCAC...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGTGGGGAAGGTCATGTaGATAATGTTGAAGCGACTC +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSVGKVM*IMLKRL
Trigger: GAGTCGCTTCAACATTATCAACATGACCTTCCCCAC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCAAGAAGGAGCCGAGCTaGTCGCTTATGATGCCCATG +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGKKEPS*SLMMPM
Trigger: CATGGGCATCATAAGCGACAAGCTCGGCTCCTTCTT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCCTGAGCTGAGGATGTaGTTGATGTCCTCTAGGAAG +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSPELRM*LMSSRK
Trigger: CTTCCTAGAGGACATCAACAACATCCTCAGCTCAGG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGCAATCTTTTCACTGTaGGCTGTTACGGCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSAIFSL*AVTAFC
Trigger: GCAGAAGGCCGTAACAGCCAACAGTGAAAAGATTGC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTCTCCTATATCCTTCTaGTTCAGAGACTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSSPISF*FRDSRA
Trigger: GGCCCTGGAGTCTCTGAACAAGAAGGATATAGGAGA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGATCTCTTCAGACTTCTaGCGAAGCTCCTCCTTCTGT +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEISSDF*RSSSFC
Trigger: ACAGAAGGAGGAGCTTCGCAAGAAGTCTGAAGAGAT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCTTCCCGATCCAGATTaGGTTGACAATCTCATCCCG +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSLPDPD*VDNLIP
Trigger: CGGGATGAGATTGTCAACCAAATCTGGATCGGGAAG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGATTCGGGCTACAGATTaGTTGAGCATGGGGTTCAGT +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEIRATD*LSMGFS
Trigger: ACTGAACCCCATGCTCAACAAATCTGTAGCCCGAAT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATCATCCTCCAGCTCCTaGAGCTTCCTTTTACCAGCC +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQSSSSS*SFLLPA
Trigger: GGCTGGTAAAAGGAAGCTCAAGGAGCTGGAGGATGA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGCACGAAGAACAGGATaGATGCCCGCTGGGCGCATG +
Preference number: 5 (lower is better)
Translates to: FTFMANTTRYLQGHITQIARRTG*MPAGRM
Trigger: CATGCGCCCAGCGGGCATCAATCCTGTTCTTCGTGC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCACATGGATTGTCCATTaGGCCCTCCCGATCCAAGAC +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGTWIVH*ALPIQD
Trigger: GTCTTGGATCGGGAGGGCCAAATGGACAATCCATGT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATTCTCCGGGGCAGCATaGGTATACCACAGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITFSGAA*VYHRCQ
Trigger: CTGGCACCTGTGGTATACCAATGCTGCCCCGGAGAA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGTGGGGATCGTGGGGTaGAATCCTCCAGCACCGACT +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATVGIVG*NPPAPT
Trigger: AGTCGGTGCTGGAGGATTCAACCCCACGATCCCCAC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAAGCTGCTCCACCAGCTaGTCCAGATTAGGCATCCAA +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQSCSTS*SRLGIQ
Trigger: TTGGATGCCTAATCTGGACAAGCTGGTGGAGCAGCT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGGCTCTGTGGTCATCTaGATGCTGACCTGCAAGATT +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSGSVVI*MLTCKI
Trigger: AATCTTGCAGGTCAGCATCAAGATGACCACAGAGCC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTCCACTGAAACGTaGTTTTGGCGAGCTGAAGAC +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSLSTET*FWRAED
Trigger: GTCTTCAGCTCGCCAAAACAACGTTTCAGTGGACAG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGGGGGATACACTAGGTaGCTGTCATCCACAGTGGAA +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGGGYTR*LSSTVE
Trigger: TTCCACTGTGGATGACAGCAACCTAGTGTATCCCCC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTACAGAGAATGCAGCCTaGCAGGTCCTCCTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLITENAA*QVLLAG
Trigger: TCCAGCAAGGAGGACCTGCAAGGCTGCATTCTCTGT...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp AAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCACCAGAGCCACAATCTTAGGTACGTGCATTaGTCCCTTCTCTCATCGCTC +
Preference number: 5 (lower is better)
Translates to: KLLQHIPGMNFYRHQSHNLRYVH*SLLSSL
Trigger: GAGCGATGAGAGAAGGGACAAATGCACGTACCTAAG...ATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCCACACAAATATTCCTaGCTCCCTCTCCCTCCACAA +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSPHKYS*LPLPPQ
Trigger: TTGTGGAGGGAGAGGGAGCAAGGAATATTTGTGTGG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGGCAGGAACACTGTTTaGTGTGTACTGAGGTCTCTT +
Preference number: 5 (lower is better)
Translates to: QLGISRATSHKFGQGQSLGRNTV*CVLRSL
Trigger: AAGAGACCTCAGTACACACAAAACAGTGTTCCTGCC...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS TCA 90 bp GGCAGTGCCTCTTCTAGATCTTTCTGGGCATTGTCAGCCAGTGCCTaGCACTTGATTTCCTCAACTGCAATCTTTTCACTGTTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: GSASSRSFWALSASA*HLISSTAIFSLLAV
Trigger: AACAGCCAACAGTGAAAAGATTGCAGTTGAGGAAATCAAGTGTCAGGCACTGGCTGACAATGCCCAGAAAGATCTAGAAGAGGCACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 90 bp CAATTGAAAATCTCTTCCAGGCTTGTAGACATGACGATGAGACCCTaGATGCCTTTCTCTAGGTCTGTCAGTGAGAACAGGATGGTCTGC +
Preference number: 5 (lower is better)
Translates to: QLKISSRLVDMTMRP*MPFSRSVSENRMVC
Trigger: GCAGACCATCCTGTTCTCACTGACAGACCTAGAGAAAGGCATCCAGGGTCTCATCGTCATGTCTACAAGCCTGGAAGAGATTTTCAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTGCTTCTTCTCAGCTTaGCTGGACATCGTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLICFFSA*LDIVQA
Trigger: TGCCTGCACGATGTCCAGCAAAGCTGAGAAGAAGCA...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGATGGGAACTGGTGCTaGGCGAATGAAGTAGACAAG +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQDGNWC*ANEVDK
Trigger: CTTGTCTACTTCATTCGCCAAGCACCAGTTCCCATC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCGTTGCACCAGCTCTTaGTCCTTTATCACCATCTCA +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSRCTSS*SFITIS
Trigger: TGAGATGGTGATAAAGGACAAAGAGCTGGTGCAACG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GGTTTGGGTGACTTAGCTGAGCCATTATGGCCATCTAGTGGCAGAACAGCGACAAAGGTTCCTTCAGGATaGACAAAAAGGTCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: GLGDLAEPLWPSSGRTATKVPSG*TKRSGL
Trigger: CAAACCTGACCTTTTTGTCAATCCTGAAGGAACCTT...TGTCGCTGTTCTGCCACTAGATGGCCATAATGGCTCAGCTAAGTCACCCAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTATCACCTCCAGGTCCTaGATTCCGGCACGGAACTTA +
Preference number: 5 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLIITSRS*IPARNL
Trigger: TAAGTTCCGTGCCGGAATCAAGGACCTGGAGGTGAT...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTCGCCGAATGCAATCCTaGTCCAGACTTGATGTCCAC +
Preference number: 5 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLIRRMQS*SRLDVH
Trigger: GTGGACATCAAGTCTGGACAAGGATTGCATTCGGCG...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAAGCCGAATACGCTCTTaGAATAGGGCCTGCTCATCT +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQSRIRS*NRACSS
Trigger: AGATGAGCAGGCCCTATTCAAAGAGCGTATTCGGCT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTAGCCGAATACGCTCTTaGAATAGGGCCTGCTCATCT +
Preference number: 5 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLSRIRS*NRACSS
Trigger: AGATGAGCAGGCCCTATTCAAAGAGCGTATTCGGCT...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGCCCAGTGCAGTTTCTaGAGTCCCGGGTGGATCTTC +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATAQCSF*SPGWIF
Trigger: GAAGATCCACCCGGGACTCAAGAAACTGCACTGGGC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTCCCTGTATACCCGTTaGCCACTAATGCGTACCAGC +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRSLYTR*PLMRTS
Trigger: GCTGGTACGCATTAGTGGCAAACGGGTATACAGGGA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTCCCCGTTGATAGCCTaGGATAGTTCTAGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGSPLIA*DSSSSD
Trigger: GTCACTGCTAGAACTATCCAAGGCTATCAACGGGGA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGTCTTTCCATCCCCGTaGATAGCCTTGGATAGTTCT +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSVFPSP*IALDSS
Trigger: AGAACTATCCAAGGCTATCAACGGGGATGGAAAGAC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCATGCCGCTGCTGATTaGGGTCTGGATCTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLHAAAD*GLDLLD
Trigger: ATCAAGAAGATCCAGACCCAAATCAGCAGCGGCATG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGATGAAGGAGTCCTTGTaGATCTCCCAGATCTCCCGG +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRMKESL*ISQISR
Trigger: CCGGGAGATCTGGGAGATCAACAAGGACTCCTTCAT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGATGAAGGAGTCCTTGTaGATCTCCCAGATCTCCCGG +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWMKESL*ISQISR
Trigger: CCGGGAGATCTGGGAGATCAACAAGGACTCCTTCAT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCAGCAGAGTCGCGAACTaGTTCTGCCATTCATTGCAG +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGSRVAN*FCHSLQ
Trigger: CTGCAATGAATGGCAGAACAAGTTCGCGACTCTGCT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CCGGGCATGAATTTCTATCGTCACCAGAGCCACAATTTTAAGCCGCATGATCTTAGCAGAGTCGCGAACTaGTTCTGCCATTCATTGCAG +
Preference number: 5 (lower is better)
Translates to: PGMNFYRHQSHNFKPHDLSRVAN*FCHSLQ
Trigger: CTGCAATGAATGGCAGAACAAGTTCGCGACTCTGCT...AAGATCATGCGGCTTAAAATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAACAACCCACTCCCCGTaGAGACTGTCCAGCATCTCC +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATTTHSP*RLSSIS
Trigger: GGAGATGCTGGACAGTCTCAACGGGGAGTGGGTTGT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAACTGTCCAGCAGAGTTaGTTGGAAGACAACCCACTC +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQTVQQS*LEDNPL
Trigger: GAGTGGGTTGTCTTCCAACAAACTCTGCTGGACAGT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCACTGTCCAGCAGAGTTaGTTGGAAGACAACCCACTC +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGTVQQS*LEDNPL
Trigger: GAGTGGGTTGTCTTCCAACAAACTCTGCTGGACAGT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTGGATCAGGCCTGTCTaGAATTTCTCCTTGTGTTTC +
Preference number: 5 (lower is better)
Translates to: QLGISRATSHKFGQGQSLWIRPV*NFSLCF
Trigger: GAAACACAAGGAGAAATTCAAGACAGGCCTGATCCA...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTATGTGCTTTCTTCTaGAAGTCATCTGCCGAGTGG +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSVCAFF*KSSAEW
Trigger: CCACTCGGCAGATGACTTCAAGAAGAAAGCACATAC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TCTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCGTATGTGCTTTCTTCTaGAAGTCATCTGCCGAGTGG +
Preference number: 5 (lower is better)
Translates to: SKNTEWRKSMYSPSPENIVCAFF*KSSAEW
Trigger: CCACTCGGCAGATGACTTCAAGAAGAAAGCACATAC...GATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGACATGTATCCCACGTaGCTGGTGAAATGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQDMYPT*LVKWPL
Trigger: CAAAGGCCATTTCACCAGCAACGTGGGATACATGTC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGGTGGCTGCTCGATCTaGAAGATGCCCAGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATGGCSI*KMPRLA
Trigger: AGCCAACCTGGGCATCTTCAAGATCGAGCAGCCACC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATGCGATCTCCCAGATTaGCTGGAGGGCATCGAGCTC +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATCDLPD*LEGIEL
Trigger: GAGCTCGATGCCCTCCAGCAAATCTGGGAGATCGCA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATCCTTCTCAAAGGCCTaGACAAAGCGTGATGCCTTC +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQSFSKA*TKRDAF
Trigger: GAAGGCATCACGCTTTGTCAAGGCCTTTGAGAAGGA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATCATTGGGCAGCTGCTaGCGGATGTCTTCTCCTAGG +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITSLGSC*RMSSPR
Trigger: CCTAGGAGAAGACATCCGCAAGCAGCTGCCCAATGA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGATGATGGCTTTCCAGTaGCTGTTGACCTGGTCAAAT +
Preference number: 5 (lower is better)
Translates to: QLGISRATSHKFGQGQSLMMAFQ*LLTWSN
Trigger: ATTTGACCAGGTCAACAGCAACTGGAAAGCCATCAT...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTCATACCTCTGGGTGCACAAACGAGGGTCCTGCCTCATGCATCCGTGAGAACGTGGATTCTCAGCAACTaGATGTTGTCAAAGCATTTT +
Preference number: 5 (lower is better)
Translates to: FIPLGAQTRVLPHASVRTWILSN*MLSKHF
Trigger: AAAATGCTTTGACAACATCAAGTTGCTGAGAATCCA...CGTTCTCACGGATGCATGAGGCAGGACCCTCGTTTGTGCACCCAGAGGTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCATTTGTCCCTCTTGTaGAGGAACTTCCTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRHLSLL*RNFLRA
Trigger: GGCCCTCAGGAAGTTCCTCAACAAGAGGGACAAATG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGACCTTGAGGATTTTCTaGTCTGCCCGCTCCTTCGCT +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWTLRIF*SARSFA
Trigger: AGCGAAGGAGCGGGCAGACAAGAAAATCCTCAAGGT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTCTTGCACGATGGCATaGAACAGGGGTGCATCAACT +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGSCTMA*NRGAST
Trigger: AGTTGATGCACCCCTGTTCAATGCCATCGTGCAAGA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TCTAAAAATACTGAGTGGAGGAAGTCAATGTACTCGCCGTCGCCCGAGAACATCCCATCTGTCCATTCATaGGTGCTGAGGTCATATTCC +
Preference number: 5 (lower is better)
Translates to: SKNTEWRKSMYSPSPENIPSVHS*VLRSYS
Trigger: GGAATATGACCTCAGCACCAATGAATGGACAGATGG...GATGTTCTCGGGCGACGGCGAGTACATTGACTTCCTCCACTCAGTATTTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAATGAGGGTCAACACCTaGTTATCGTCCATGACGGAG +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQMRVNT*LSSMTE
Trigger: CTCCGTCATGGACGATAACAAGGTGTTGACCCTCAT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAAGGCCAGCATCTTGTaGATGAGCTTTTCGAACATG +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEKASIL*MSFSNM
Trigger: CATGTTCGAAAAGCTCATCAACAAGATGCTGGCCTT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGACCAGCTCCTTGCAGTaGTCCTTCTTAAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWTSSLQ*SFLKAS
Trigger: GCTGGCCTTTAAGAAGGACAACTGCAAGGAGCTGGT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAGGGGCACCAGCTCCTaGCAGTTGTCCTTCTTAAAG +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRRGTSS*QLSFLK
Trigger: CTTTAAGAAGGACAACTGCAAGGAGCTGGTGCCCCT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTATACCGTGTCCTTATaGGGAAAGGAGCCCTCGATC +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGYTVSL*GKEPSI
Trigger: GATCGAGGGCTCCTTTCCCAATAAGGACACGGTATA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTATTTCTCGAATGTACTaGATGGTCTGCTTCGTACGG +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSISRMY*MVCFVR
Trigger: CCGTACGAAGCAGACCATCAAGTACATTCGAGAAAT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAAGAAGGAGCCGAGCTaGTCGCTTATGATGCCCATG +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRKKEPS*SLMMPM
Trigger: CATGGGCATCATAAGCGACAAGCTCGGCTCCTTCTT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATGGCGATACAGACGCTaGATATCATCTCGGAACTCC +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQWRYRR*ISSRNS
Trigger: GGAGTTCCGAGATGATATCAAGCGTCTGTATCGCCA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTTGACGATGGTGGTCTaGGCTGAGGTCTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: FTFMANTTRYLQGHITQILTMVV*AEVSGL
Trigger: CAGCCCAGAGACCTCAGCCAAGACCACCATCGTCAA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTTACCAGCCGCGATGTaGATGACCAGTGAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRLPAAM*MTSESF
Trigger: GAAGGACTCACTGGTCATCAACATCGCGGCTGGTAA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTCTGTGGCTGTGATCTaGGAGGTATGCAGCGTGTTC +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWSVAVI*EVCSVF
Trigger: GAACACGCTGCATACCTCCAAGATCACAGCCACAGA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTATGCAGCCCATATCATaGAGCACGAAGAACAGGATT +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSMQPIS*STKNRI
Trigger: AATCCTGTTCTTCGTGCTCAATGATATGGGCTGCAT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACGGTCCTCCAGCTTATaGCTGCGGTGGCTTTTGTCA +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITRSSSL*LRWLLS
Trigger: TGACAAAAGCCACCGCAGCAATAAGCTGGAGGACCG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCAGCTACTACATGGATaGTCCATTTGGCCCTCCCGA +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRQLLHG*SIWPSR
Trigger: TCGGGAGGGCCAAATGGACAATCCATGTAGTAGCTG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGATCCGTTGCATTTCATaGCAGGCATTTTCCCACTCA +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSEIRCIS*QAFSHS
Trigger: TGAGTGGGAAAATGCCTGCAATGAAATGCAACGGAT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAAAGCGGGAGCCAAGGTaGGTGATGATGAAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITKREPR*VMMKEV
Trigger: GACCTCCTTCATCATCACCAACCTTGGCTCCCGCTT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTTATATTTGGCAGGTTaGGAGCAGCGGGAAAACTGT +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSELYLAG*EQRENC
Trigger: ACAGTTTTCCCGCTGCTCCAAACCTGCCAAATATAA...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTAGCTGCAGGAACTTTTaGCGTTCAAGTAACACAGAG +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSSCRNF*RSSNTE
Trigger: CTCTGTGTTACTTGAACGCAAAAAGTTCCTGCAGCT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTACCTCAATAAGGTCCTaGCAGCGCTGCACAAAGGCA +
Preference number: 5 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLITSIRS*QRCTKA
Trigger: TGCCTTTGTGCAGCGCTGCAAGGACCTTATTGAGGT...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp GAGTGGCGGGAGTTCTTGGTTTCATACAACTGGAAAACCTTGGTGAGGGTGAACGTGTTTTTCTTATCATaGTTCTCAACAGCCGCGGCA +
Preference number: 5 (lower is better)
Translates to: EWREFLVSYNWKTLVRVNVFFLS*FSTAAA
Trigger: TGCCGCGGCTGTTGAGAACAATGATAAGAAAAACAC...GTTCACCCTCACCAAGGTTTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGAGGCTGCCACAGGCATaGATCTCAGGTTATGAATTT +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSERLPQA*ISGYEF
Trigger: AAATTCATAACCTGAGATCAATGCCTGTGGCAGCCT...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS GCA 90 bp AGGGCATCGAGCTCCTTTGAATTCGAAATCTTCCAGAAGTGTATGTaGTTTCTTCTTGAAGTCATCTGCCGAGTGGATCAGGCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: RASSSFEFEIFQKCM*FLLEVICRVDQACL
Trigger: AAGACAGGCCTGATCCACTCGGCAGATGACTTCAAGAAGAAAGCACATACACTTCTGGAAGATTTCGAATTCAAAGGAGCTCGATGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCGTTGCACCAGCTCTTaGTCCTTTATCACCATCTCA +
Preference number: 5 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLRCTSS*SFITIS
Trigger: TGAGATGGTGATAAAGGACAAAGAGCTGGTGCAACG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTAGGTCCATGCATCGGTaGCGCCAGAACTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFRSMHR*RQNSIS
Trigger: GGAGATTGAGTTCTGGCGCAACCGATGCATGGACCT...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAACAAAAAGGTCAGGTTaGACTGTGCTTGACGAGAGC +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQTKRSG*TVLDES
Trigger: GCTCTCGTCAAGCACAGTCAAACCTGACCTTTTTGT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAATTGCTAGAGATGTCCTaGGGCTTCATGAAAGCCAAC +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQLLEMS*GFMKAN
Trigger: GTTGGCTTTCATGAAGCCCAAGGACATCTCTAGCAA...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATGCCAACAGGTGTTCTaGACATCCAGGATACCCCCG +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATCQQVF*TSRIPP
Trigger: CGGGGGTATCCTGGATGTCAAGAACACCTGTTGGCA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAAGGTCTGGCCATTTCTaGTTCCGTTCACGGTTCACC +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITRSGHF*FRSRFT
Trigger: GGTGAACCGTGAACGGAACAAGAAATGGCCAGACCT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGTCAGAGTGGATGCCTaGAACTCATTCACAATCATC +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSVRVDA*NSFTII
Trigger: GATGATTGTGAATGAGTTCAAGGCATCCACTCTGAC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACTTGGAAGAGTGGGTTaGGGCTGGTCTTTCCATCCC +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATLGRVG*GWSFHP
Trigger: GGGATGGAAAGACCAGCCCAAACCCACTCTTCCAAG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGCTGTGCCACACTTCCTaGCAGATCATTCTTCAAAAT +
Preference number: 5 (lower is better)
Translates to: QLGISRATSHKFGQGQSLLCHTS*QIILQN
Trigger: ATTTTGAAGAATGATCTGCAAGGAAGTGTGGCACAG...CAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGCTGTGCCACACTTCCTaGCAGATCATTCTTCAAAAT +
Preference number: 5 (lower is better)
Translates to: TRYLQGHITQIRPRSKSELCHTS*QIILQN
Trigger: ATTTTGAAGAATGATCTGCAAGGAAGTGTGGCACAG...CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTGGTTGCCAATGTCATaGACCACACCTGCCAAAGTC +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRWLPMS*TTPAKV
Trigger: GACTTTGGCAGGTGTGGTCAATGACATTGGCAACCA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTGTGGAAAAGAGGTGGTaGCCAATGTCATTGACCACA +
Preference number: 5 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLVEKRW*PMSLTT
Trigger: TGTGGTCAATGACATTGGCAACCACCTCTTTTCCAC...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTGATGTCCTCATCTaGCTCCACAACTGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSLDVLI*LHNCLD
Trigger: ATCCAAACAGTTGTGGAGCAAGATGAGGACATCAAG...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGAGCACAAACTGGATGTaGGTGACTGTCTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWSTNWM*VTVSSF
Trigger: GAAGGAGGAGACAGTCACCAACATCCAGTTTGTGCT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAGCAGAGTCGCGAACTaGTTCTGCCATTCATTGCAG +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRSRVAN*FCHSLQ
Trigger: CTGCAATGAATGGCAGAACAAGTTCGCGACTCTGCT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTTCAAGAATGGCAAATaGCTCGTGTATGGGAGGGAT +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSFKNGK*LVYGRD
Trigger: ATCCCTCCCATACACGAGCAATTTGCCATTCTTGAA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGTGTTTCTTCAGCATTaGCTTACTGTCCAGCAGAGT +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSVFLQH*LTVQQS
Trigger: ACTCTGCTGGACAGTAAGCAAATGCTGAAGAAACAC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTTGGATCAGGCCTGTCTaGAATTTCTCCTTGTGTTTC +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSWIRPV*NFSLCF
Trigger: GAAACACAAGGAGAAATTCAAGACAGGCCTGATCCA...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTGTATGTGCTTTCTTCTaGAAGTCATCTGCCGAGTGG +
Preference number: 5 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLVCAFF*KSSAEW
Trigger: CCACTCGGCAGATGACTTCAAGAAGAAAGCACATAC...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTTGAAGATGCCCAGGTaGGCTCGGAGACTATTTTCC +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWLKMPR*ARRLFS
Trigger: GGAAAATAGTCTCCGAGCCAACCTGGGCATCTTCAA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTCGGTCCTTATACTCTTaGGCTAATTTTGTGAGGCGA +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSRSLYS*ANFVRR
Trigger: TCGCCTCACAAAATTAGCCAAAGAGTATAAGGACCG...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGAATAAGGTCGATTCATaGGGCAGCTGCTTGCGGATG +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWNKVDS*GSCLRM
Trigger: CATCCGCAAGCAGCTGCCCAATGAATCGACCTTATT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGCTTTCCAGTTGCTGTaGACCTGGTCAAATAAGGTC +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGAFQLL*TWSNKV
Trigger: GACCTTATTTGACCAGGTCAACAGCAACTGGAAAGC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTGTCAAAGCATTTTTaGAGGTGTGGCTGCACAGCC +
Preference number: 5 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLLSKHF*RCGCTA
Trigger: GGCTGTGCAGCCACACCTCAAAAAATGCTTTGACAA...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCACTCCTTCACCCATTaGTCCCTCTTGTTGAGGAAC +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRHSFTH*SLLLRN
Trigger: GTTCCTCAACAAGAGGGACAAATGGGTGAAGGAGTG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GCAGTTGCCAAAGCCCTCTCCAAAGAGAATGATTTCTGCAATGAGGGTGGAGTCTTCTTCTTCATGACCTaGAGGATTTTCTTGTCTGCC +
Preference number: 5 (lower is better)
Translates to: AVAKALSKENDFCNEGGVFFFMT*RIFLSA
Trigger: GGCAGACAAGAAAATCCTCAAGGTCATGAAGAAGAA...GACTCCACCCTCATTGCAGAAATCATTCTCTTTGGAGAGGGCTTTGGCAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGCCAGAATCTTGCAGTaGCCAAAGCCCTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITARILQ*PKPSPK
Trigger: CTTTGGAGAGGGCTTTGGCAACTGCAAGATTCTGGC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCAGTGTGTACACCTTCTaGGCCAGAATCTTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGSVYTF*ARILQL
Trigger: CAACTGCAAGATTCTGGCCAAGAAGGTGTACACACT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTTCAACTGAAGTGAGCTaGGCGATGTTCATATCTCTC +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSSTEVS*AMFISL
Trigger: GAGAGATATGAACATCGCCAAGCTCACTTCAGTTGA...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAAACTCTCTAACAATGTaGAAGTTAGGGTCTCCGGCG +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQNSLTM*KLGSPA
Trigger: CGCCGGAGACCCTAACTTCAACATTGTTAGAGAGTT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGATGAGGGTCAACACCTaGTTATCGTCCATGACGGAG +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWMRVNT*LSSMTE
Trigger: CTCCGTCATGGACGATAACAAGGTGTTGACCCTCAT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACTTTTCGAACATGCGTaGAAGGGGCTCCACCTCAGC +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATLFEHA*KGLHLS
Trigger: GCTGAGGTGGAGCCCCTTCAACGCATGTTCGAAAAG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTGTCATGTTGATAATGTaGAAGCGACTCCGTAGCCTT +
Preference number: 5 (lower is better)
Translates to: TQLGISRATSHKFGQGQSVMLIM*KRLRSL
Trigger: AAGGCTACGGAGTCGCTTCAACATTATCAACATGAC...ACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAGGTCTTCATACACCTaGGGCTCCTTCAGGAAATCC +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRRSSYT*GSFRKS
Trigger: GGATTTCCTGAAGGAGCCCAAGGTGTATGAAGACCT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTGGCGATACAGACGCTaGATATCATCTCGGAACTCC +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWWRYRR*ISSRNS
Trigger: GGAGTTCCGAGATGATATCAAGCGTCTGTATCGCCA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGAGCTGAGGATGTTGTaGATGTCCTCTAGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRELRML*MSSRKD
Trigger: GTCCTTCCTAGAGGACATCAACAACATCCTCAGCTC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGCAATCTTTTCACTGTaGGCTGTTACGGCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWAIFSL*AVTAFC
Trigger: GCAGAAGGCCGTAACAGCCAACAGTGAAAAGATTGC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATTCCAGTCCCGGACTTaGGTAGGATTGCACAGGAAG +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITFQSRT*VGLHRK
Trigger: CTTCCTGTGCAATCCTACCAAAGTCCGGGACTGGAA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACGGGCTACAGATTTGTaGAGCATGGGGTTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITRATDL*SMGFSV
Trigger: CACACTGAACCCCATGCTCAACAAATCTGTAGCCCG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTATTCGGGCTACAGATTaGTTGAGCATGGGGTTCAGT +
Preference number: 5 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLIRATD*LSMGFS
Trigger: ACTGAACCCCATGCTCAACAAATCTGTAGCCCGAAT...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACGCGCCAAGTCAGTGTaGATCTCTGTGGTCTCACTG +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATRAKSV*ISVVSL
Trigger: CAGTGAGACCACAGAGATCAACACTGACTTGGCGCG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTATGCAGCCCATATCATaGAGCACGAAGAACAGGATT +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSMQPIS*STKNRI
Trigger: AATCCTGTTCTTCGTGCTCAATGATATGGGCTGCAT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAATGAGTCCGTGGAAGTaGGTCAGTTTGTCTAGCTCT +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQMSPWK*VSLSSS
Trigger: AGAGCTAGACAAACTGACCAACTTCCACGGACTCAT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAGCAGCTTCTTATATTaGGCAGGTTTGGAGCAGCGG +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRSSFLY*AGLEQR
Trigger: CCGCTGCTCCAAACCTGCCAAATATAAGAAGCTGCT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGTCTGCATCAGTGTGTaGTATCTCTGGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWVCISV*YLWISC
Trigger: GCAGGAGATCCAGAGATACAACACACTGATGCAGAC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGATGAGGAAAAAGCAATaGGGGCACGAGGAAGGTCAC +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWMRKKQ*GHEEGH
Trigger: GTGACCTTCCTCGTGCCCCAATTGCTTTTTCCTCAT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGGTCTCTTAGCAGAGTaGGCTGAGGAACTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITGLLAE*AEELCA
Trigger: AGCACAGAGTTCCTCAGCCAACTCTGCTAAGAGACC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS GCA 90 bp GCTGGTGAAATGGCCTTTGAATTCGAAATCTTCCAGAAGTGTATGTaGTTTCTTCTTGAAGTCATCTGCCGAGTGGATCAGGCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: AGEMAFEFEIFQKCM*FLLEVICRVDQACL
Trigger: AAGACAGGCCTGATCCACTCGGCAGATGACTTCAAGAAGAAAGCACATACACTTCTGGAAGATTTCGAATTCAAAGGCCATTTCACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTACAAAAAGGTCAGGTTaGACTGTGCTTGACGAGAGC +
Preference number: 5 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLITKRSG*TVLDES
Trigger: GCTCTCGTCAAGCACAGTCAAACCTGACCTTTTTGT...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp GTGGCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTGCTAGAGATGTCCTaGGGCTTCATGAAAGCCAAC +
Preference number: 5 (lower is better)
Translates to: VAEQRHHWFSQIVEWFLILLEMS*GFMKAN
Trigger: GTTGGCTTTCATGAAGCCCAAGGACATCTCTAGCAA...AATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTATCACCTCCAGGTCCTaGATTCCGGCACGGAACTTA +
Preference number: 5 (lower is better)
Translates to: FTFMANTTRYLQGHITQIITSRS*IPARNL
Trigger: TAAGTTCCGTGCCGGAATCAAGGACCTGGAGGTGAT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAAGGTCTGGCCATTTCTaGTTCCGTTCACGGTTCACC +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATRSGHF*FRSRFT
Trigger: GGTGAACCGTGAACGGAACAAGAAATGGCCAGACCT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTAGGTCTGGCCATTTCTaGTTCCGTTCACGGTTCACC +
Preference number: 5 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFRSGHF*FRSRFT
Trigger: GGTGAACCGTGAACGGAACAAGAAATGGCCAGACCT...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGTCTTTCCATCCCCGTaGATAGCCTTGGATAGTTCT +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRVFPSP*IALDSS
Trigger: AGAACTATCCAAGGCTATCAACGGGGATGGAAAGAC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCAAAATGACAAGGACTaGGAAGAGTGGGTTTGGGCT +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWQNDKD*EEWVWA
Trigger: AGCCCAAACCCACTCTTCCAAGTCCTTGTCATTTTG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGGTTCACGATGTAACTaGCGCTTGGTGAGAATGTCA +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRGSRCN*RLVRMS
Trigger: TGACATTCTCACCAAGCGCAAGTTACATCGTGAACC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTTGTTCTGCCATTCATaGCAGTGCTGCACCAGGGAG +
Preference number: 5 (lower is better)
Translates to: FTFMANTTRYLQGHITQILFCHS*QCCTRE
Trigger: CTCCCTGGTGCAGCACTGCAATGAATGGCAGAACAA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAAATAAGGTCGATTCATaGGGCAGCTGCTTGCGGATG +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITNKVDS*GSCLRM
Trigger: CATCCGCAAGCAGCTGCCCAATGAATCGACCTTATT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCATGATGGCTTTCCAGTaGCTGTTGACCTGGTCAAAT +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGMMAFQ*LLTWSN
Trigger: ATTTGACCAGGTCAACAGCAACTGGAAAGCCATCAT...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACTCCGGAGAGCATTGTaGTCCTTGTTCATCCTGTCC +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATLRRAL*SLFILS
Trigger: GGACAGGATGAACAAGGACAACAATGCTCTCCGGAG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTTGTCAAAGCATTTTTaGAGGTGTGGCTGCACAGCC +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWLSKHF*RCGCTA
Trigger: GGCTGTGCAGCCACACCTCAAAAAATGCTTTGACAA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACATTTGTCCCTCTTGTaGAGGAACTTCCTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATHLSLL*RNFLRA
Trigger: GGCCCTCAGGAAGTTCCTCAACAAGAGGGACAAATG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAAGCCAGTCAAAGGAATaGACATCCATGAGGCCACTC +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITSQSKE*TSMRPL
Trigger: GAGTGGCCTCATGGATGTCAATTCCTTTGACTGGCT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACCAGTAGAACCGAAGTaGGCTGAGCCAGTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATPVEPK*AEPVKG
Trigger: TCCTTTGACTGGCTCAGCCAACTTCGGTTCTACTGG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTATAATTATACTGAAATaGCGTGTTGGTCTGGCGGAT +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSIIILK*RVGLAD
Trigger: ATCCGCCAGACCAACACGCAATTTCAGTATAATTAT...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATTCTTGGCCAGAATCTaGCAGTTGCCAAAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITFLARI*QLPKPS
Trigger: AGAGGGCTTTGGCAACTGCAAGATTCTGGCCAAGAA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AAGCTTCTCCAACACATCCCGGGCATGAATTTCTATCGTCACCAGAGCCACAATTGTTCATATCTCTCATaGAGAGCAGCAGAACCTCTT +
Preference number: 5 (lower is better)
Translates to: KLLQHIPGMNFYRHQSHNCSYLS*RAAEPL
Trigger: AAGAGGTTCTGCTGCTCTCAATGAGAGATATGAACA...ATTGTGGCTCTGGTGACGATAGAAATTCATGCCCGGGATGTGTTGGAGAAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGTTGGGAAACAGATCTaGCACGATGGCATTGAACAG +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRVGKQI*HDGIEQ
Trigger: CTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAAC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAACAGGCAGCTCAATGTaGGGAAACAGATCTTGCACG +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITTGSSM*GNRSCT
Trigger: CGTGCAAGATCTGTTTCCCAACATTGAGCTGCCTGT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGGAGTGGCGGGAGTTCTaGGTTTCATACAACTGGAAA +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIREWREF*VSYNWK
Trigger: TTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTC...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGAACTCTCTAACAATGTaGAAGTTAGGGTCTCCGGCG +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWNSLTM*KLGSPA
Trigger: CGCCGGAGACCCTAACTTCAACATTGTTAGAGAGTT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCCATCTGTCCATTCATaGGTGCTGAGGTCATATTCC +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWPSVHS*VLRSYS
Trigger: GGAATATGACCTCAGCACCAATGAATGGACAGATGG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGTCCAACTCCGTATTTaGGGGTCCACAAAATACTCA +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQVQLRI*GSTKYS
Trigger: TGAGTATTTTGTGGACCCCAAAATACGGAGTTGGAC...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAACAACTCTTAGGGAGCTaGTCCTCAAATGATGTCCAA +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQQLLGS*SSNDVQ
Trigger: TTGGACATCATTTGAGGACAAGCTCCCTAAGAGTTG...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAATGCTCTGCACGTTATaGGATGTGGTCTGTGCGGAC +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATMLCTL*DVVCAD
Trigger: GTCCGCACAGACCACATCCAATAACGTGCAGAGCAT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAATTTCTCGAATGTACTaGATGGTCTGCTTCGTACGG +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQISRMY*MVCFVR
Trigger: CCGTACGAAGCAGACCATCAAGTACATTCGAGAAAT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAATGCCCTGGAACACCTaGGAGATGTCTCGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATMPWNT*EMSRRL
Trigger: CAACCTTCGAGACATCTCCAAGGTGTTCCAGGGCAT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTCCAACGACATCACTaGCACCTTTTCCCTAGTTTC +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRLQRHH*HLFPSF
Trigger: GAAACTAGGGAAAAGGTGCAAGTGATGTCGTTGGAG...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGCCCATGTGGGCTCGTaGCCTCGAAGAATCATAACT +
Preference number: 5 (lower is better)
Translates to: FTFMANTTRYLQGHITQIAHVGS*PRRIIT
Trigger: AGTTATGATTCTTCGAGGCAACGAGCCCACATGGGC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTAAGTTGATCAGTGACTaGATGAAGTTCTGTTCCCCT +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSKLISD*MKFCSP
Trigger: AGGGGAACAGAACTTCATCAAGTCACTGATCAACTT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATTCATTCGGATTCGCTaGGGCTCCACCACCCGATAT +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATFIRIR*GSTTRY
Trigger: ATATCGGGTGGTGGAGCCCAAGCGAATCCGAATGAA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACTTCCCGATCCAGATTaGGTTGACAATCTCATCCCG +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITLPDPD*VDNLIP
Trigger: CGGGATGAGATTGTCAACCAAATCTGGATCGGGAAG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTCTGTGGCTGTGATCTaGGAGGTATGCAGCGTGTTC +
Preference number: 5 (lower is better)
Translates to: FTFMANTTRYLQGHITQISVAVI*EVCSVF
Trigger: GAACACGCTGCATACCTCCAAGATCACAGCCACAGA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTCATCCATGTTGAGCTaGCCAGAAGTCTCCAAGATT +
Preference number: 5 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLSSMLS*PEVSKI
Trigger: AATCTTGGAGACTTCTGGCAAGCTCAACATGGATGA...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTTGTATTCATCCATGTaGAGCTTGCCAGAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGLYSSM*SLPEVS
Trigger: GGAGACTTCTGGCAAGCTCAACATGGATGAATACAA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAATCCGTTGCATTTCATaGCAGGCATTTTCCCACTCA +
Preference number: 5 (lower is better)
Translates to: LWLTQLGISRATSHKFGQIRCIS*QAFSHS
Trigger: TGAGTGGGAAAATGCCTGCAATGAAATGCAACGGAT...TTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGGCTCTGTGGTCATCTaGATGCTGACCTGCAAGATT +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITGSVVI*MLTCKI
Trigger: AATCTTGCAGGTCAGCATCAAGATGACCACAGAGCC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCTTATATTTGGCAGGTTaGGAGCAGCGGGAAAACTGT +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGLYLAG*EQRENC
Trigger: ACAGTTTTCCCGCTGCTCCAAACCTGCCAAATATAA...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGGGTGTAATCTGAGGTaGCAAGGAAAGCAAAGTATC +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGGCNLR*QGKQSI
Trigger: GATACTTTGCTTTCCTTGCAACCTCAGATTACACCC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGAGTGCATCAAAGATGCAATaGAAAATCTCTTCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: LGISRATSHKFGQGQSLSASKMQ*KISSRL
Trigger: AAGCCTGGAAGAGATTTTCAATTGCATCTTTGATGC...ACTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GCAGAACAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTATGGGAGTGAAATTCTaGGGAGAGCTGCAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: AEQRHHWFSQIVEWFLIFMGVKF*GELQKG
Trigger: CCCCTTCTGCAGCTCTCCCAAGAATTTCACTCCCAT...AAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTGTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS TCA 90 bp TCCATGTTGAGCTTGCCAGAAGTCTCCAAGATTTTGGCACACATATaGAAACTGAATAGTAGTTTGTGGCGTTCGAAAAGGGTACGGCAG +
Preference number: 5 (lower is better)
Translates to: SMLSLPEVSKILAHI*KLNSSLWRSKRVRQ
Trigger: CTGCCGTACCCTTTTCGAACGCCACAAACTACTATTCAGTTTTCATATGTGTGCCAAAATCTTGGAGACTTCTGGCAAGCTCAACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 90 bp GGAAGAAACAGAGTGAAAACAGCAGCTTCTTATATTTGGCAGGTTTaGAGCAGCGGGAAAACTGTGGTTCTGACATCAGTTGGTAAAGAC +
Preference number: 5 (lower is better)
Translates to: GRNRVKTAASYIWQV*SSGKTVVLTSVGKD
Trigger: GTCTTTACCAACTGATGTCAGAACCACAGTTTTCCCGCTGCTCCAAACCTGCCAAATATAAGAAGCTGCTGTTTTCACTCTGTTTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 90 bp ACACAGAGTGGAAGAAACAGAGTGAAAACAGCAGCTTCTTATATTTaGCAGGTTTGGAGCAGCGGGAAAACTGTGGTTCTGACATCAGTT +
Preference number: 5 (lower is better)
Translates to: TQSGRNRVKTAASYI*QVWSSGKTVVLTSV
Trigger: AACTGATGTCAGAACCACAGTTTTCCCGCTGCTCCAAACCTGCCAAATATAAGAAGCTGCTGTTTTCACTCTGTTTCTTCCACTCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGATGGGAACTGGTGCTaGGCGAATGAAGTAGACAAG +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATDGNWC*ANEVDK
Trigger: CTTGTCTACTTCATTCGCCAAGCACCAGTTCCCATC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAGAATCAGAAGGGACTaGTCAAAGTTGACATCCAGC +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRRIRRD*SKLTSS
Trigger: GCTGGATGTCAACTTTGACAAGTCCCTTCTGATTCT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGAGAATCAGAAGGGACTaGTCAAAGTTGACATCCAGC +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWRIRRD*SKLTSS
Trigger: GCTGGATGTCAACTTTGACAAGTCCCTTCTGATTCT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAACAATCATCTGCACCTaGCTGGCATGTATACGGCAC +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATTIICT*LACIRH
Trigger: GTGCCGTATACATGCCAGCAAGGTGCAGATGATTGT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTGCCCGATGCTCTCTTaGGTCCTCTTCAAATTCCAG +
Preference number: 5 (lower is better)
Translates to: FTFMANTTRYLQGHITQICPMLS*VLFKFQ
Trigger: CTGGAATTTGAAGAGGACCAAAGAGAGCATCGGGCA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCTTGATGTCCTCATCTaGCTCCACAACTGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWLDVLI*LHNCLD
Trigger: ATCCAAACAGTTGTGGAGCAAGATGAGGACATCAAG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATGGGTCTGGATCTTCTaGATGTCCTCATCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATWVWIF*MSSSCS
Trigger: GGAGCAAGATGAGGACATCAAGAAGATCCAGACCCA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTTCAAGAATGGCAAATaGCTCGTGTATGGGAGGGAT +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRFKNGK*LVYGRD
Trigger: ATCCCTCCCATACACGAGCAATTTGCCATTCTTGAA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTCTGGTGAAATGGCCTTaGAATTCGAAATCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLLVKWP*NSKSSR
Trigger: TCTGGAAGATTTCGAATTCAAAGGCCATTTCACCAG...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCCTTCTCAAAGGCCTaGACAAAGCGTGATGCCTTC +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATSFSKA*TKRDAF
Trigger: GAAGGCATCACGCTTTGTCAAGGCCTTTGAGAAGGA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTGGGAAAATATGTCGCTaGGTCTCTAAATACATATCC +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSGKICR*VSKYIS
Trigger: GGATATGTATTTAGAGACCAAGCGACATATTTTCCC...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGAGTGGCGGGAGTTCTaGGTTTCATACAACTGGAAA +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITEWREF*VSYNWK
Trigger: TTTCCAGTTGTATGAAACCAAGAACTCCCGCCACTC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACCATCTGTCCATTCATaGGTGCTGAGGTCATATTCC +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITPSVHS*VLRSYS
Trigger: GGAATATGACCTCAGCACCAATGAATGGACAGATGG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGTCCAACTCCGTATTTaGGGGTCCACAAAATACTCA +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWVQLRI*GSTKYS
Trigger: TGAGTATTTTGTGGACCCCAAAATACGGAGTTGGAC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCAACTCTTAGGGAGCTaGTCCTCAAATGATGTCCAA +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWQLLGS*SSNDVQ
Trigger: TTGGACATCATTTGAGGACAAGCTCCCTAAGAGTTG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACGTGTGATGCTGGACTaGGTATCATGGAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATRVMLD*VSWKSL
Trigger: CAAGGACTTCCATGATACCAAGTCCAGCATCACACG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAAGGTCTTCATACACCTaGGGCTCCTTCAGGAAATCC +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATRSSYT*GSFRKS
Trigger: GGATTTCCTGAAGGAGCCCAAGGTGTATGAAGACCT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCGGACTCATCAGCTATTaGGGTGTCCACAAAAATGAA +
Preference number: 5 (lower is better)
Translates to: LLWLTQLGISRATSHKFGGLISY*GVHKNE
Trigger: TTCATTTTTGTGGACACCCAAATAGCTGATGAGTCC...GCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTGAGCTGAGGATGTTGTaGATGTCCTCTAGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: FTFMANTTRYLQGHITQIELRML*MSSRKD
Trigger: GTCCTTCCTAGAGGACATCAACAACATCCTCAGCTC...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACTAGTTTCGTCGATCTaGAACAAGCCTGTCCGCAGT +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATLVSSI*NKPVRS
Trigger: ACTGCGGACAGGCTTGTTCAAGATCGACGAAACTAG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACTCCAACGACATCACTaGCACCTTTTCCCTAGTTTC +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITLQRHH*HLFPSF
Trigger: GAAACTAGGGAAAAGGTGCAAGTGATGTCGTTGGAG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTCTCCTATATCCTTCTaGTTCAGAGACTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: FTFMANTTRYLQGHITQISPISF*FRDSRA
Trigger: GGCCCTGGAGTCTCTGAACAAGAAGGATATAGGAGA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAATCTCTTCAGACTTCTaGCGAAGCTCCTCCTTCTGT +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITISSDF*RSSSFC
Trigger: ACAGAAGGAGGAGCTTCGCAAGAAGTCTGAAGAGAT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGCCAAGGTCAAAGTCTAAACTGAATAGTAGTTaGTGGCGTTCGAAAAGGGTA +
Preference number: 5 (lower is better)
Translates to: TTRYLQGHITQIRPRSKSKLNSS*WRSKRV
Trigger: TACCCTTTTCGAACGCCACAAACTACTATTCAGTTT...AGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTCATCCATGTTGAGCTaGCCAGAAGTCTCCAAGATT +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRSSMLS*PEVSKI
Trigger: AATCTTGGAGACTTCTGGCAAGCTCAACATGGATGA...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTGGAAGTTGGTCAGTTaGTCTAGCTCTGTGATGTTA +
Preference number: 5 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLWKLVS*SSSVML
Trigger: TAACATCACAGAGCTAGACAAACTGACCAACTTCCA...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGAGTATCAAAGAGGGTTaGTGCCTCAGTGATCTGAGA +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWSIKEG*CLSDLR
Trigger: TCTCAGATCACTGAGGCACAAACCCTCTTTGATACT...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTCCTTGCAGGTCCTCCTaGCTGGAAGAGACATATCCC +
Preference number: 5 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFPCRSS*LEETYP
Trigger: GGGATATGTCTCTTCCAGCAAGGAGGACCTGCAAGG...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTACAAAAAGGTCAGGTTaGACTGTGCTTGACGAGAGC +
Preference number: 5 (lower is better)
Translates to: FTFMANTTRYLQGHITQITKRSG*TVLDES
Trigger: GCTCTCGTCAAGCACAGTCAAACCTGACCTTTTTGT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTTGCTAGAGATGTCCTaGGGCTTCATGAAAGCCAAC +
Preference number: 5 (lower is better)
Translates to: FTFMANTTRYLQGHITQILLEMS*GFMKAN
Trigger: GTTGGCTTTCATGAAGCCCAAGGACATCTCTAGCAA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGTCAGAGTGGATGCCTaGAACTCATTCACAATCATC +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITVRVDA*NSFTII
Trigger: GATGATTGTGAATGAGTTCAAGGCATCCACTCTGAC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACACAAAATGACAAGGACTaGGAAGAGTGGGTTTGGGCT +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATQNDKD*EEWVWA
Trigger: AGCCCAAACCCACTCTTCCAAGTCCTTGTCATTTTG...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GTTACCCAAGTACTCATAATTATACTGAAATTGCGTGTTGGTCTGGCGGATGACGTGTTTCTTCAGCATTaGCTTACTGTCCAGCAGAGT +
Preference number: 5 (lower is better)
Translates to: VTQVLIIILKLRVGLADDVFLQH*LTVQQS
Trigger: ACTCTGCTGGACAGTAAGCAAATGCTGAAGAAACAC...GTCATCCGCCAGACCAACACGCAATTTCAGTATAATTATGAGTACTTGGGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAAGGCCCTCAGAGCAGTaGACCACAATGACATATATG +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATRPSEQ*TTMTYM
Trigger: CATATATGTCATTGTGGTCAACTGCTCTGAGGGCCT...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTGTTCATATCTCTCATaGAGAGCAGCAGAACCTCTT +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWCSYLS*RAAEPL
Trigger: AAGAGGTTCTGCTGCTCTCAATGAGAGATATGAACA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGTTGGGAAACAGATCTaGCACGATGGCATTGAACAG +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATVGKQI*HDGIEQ
Trigger: CTGTTCAATGCCATCGTGCAAGATCTGTTTCCCAAC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAAAGGCCAGCATCTTGTaGATGAGCTTTTCGAACATG +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITKASIL*MSFSNM
Trigger: CATGTTCGAAAAGCTCATCAACAAGATGCTGGCCTT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGCCACGTAGAAAGAAGTaGTATTCATCCATGTTGAGC +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWPRRKK*YSSMLS
Trigger: GCTCAACATGGATGAATACAACTTCTTTCTACGTGG...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTGGAAGTTGGTCAGTTaGTCTAGCTCTGTGATGTTA +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWWKLVS*SSSVML
Trigger: TAACATCACAGAGCTAGACAAACTGACCAACTTCCA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTATGAGTCCGTGGAAGTaGGTCAGTTTGTCTAGCTCT +
Preference number: 5 (lower is better)
Translates to: FTFMANTTRYLQGHITQIMSPWK*VSLSSS
Trigger: AGAGCTAGACAAACTGACCAACTTCCACGGACTCAT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGGGTGTAATCTGAGGTaGCAAGGAAAGCAAAGTATC +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITGCNLR*QGKQSI
Trigger: GATACTTTGCTTTCCTTGCAACCTCAGATTACACCC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTCTGGGTTTTGCCATGTaGCCCAGGCTGTTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFLGFAM*PRLFSN
Trigger: GTTTGAGAACAGCCTGGGCAACATGGCAAAACCCAG...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS GCA 90 bp TTCGAAATCTTCCAGAAGTGTATGTGCTTTCTTCTTGAAGTCATCTaGCGAGTGGATCAGGCCTGTCTTGAATTTCTCCTTGTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: FEIFQKCMCFLLEVI*RVDQACLEFLLVFL
Trigger: AAGAAACACAAGGAGAAATTCAAGACAGGCCTGATCCACTCGGCAGATGACTTCAAGAAGAAAGCACATACACTTCTGGAAGATTTCGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAAAGGTTCCTTCAGGATaGACAAAAAGGTCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITKVPSG*TKRSGL
Trigger: CAAACCTGACCTTTTTGTCAATCCTGAAGGAACCTT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGTGTTTCTTCAGCATTaGCTTACTGTCCAGCAGAGT +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATVFLQH*LTVQQS
Trigger: ACTCTGCTGGACAGTAAGCAAATGCTGAAGAAACAC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGTCCTTATACTCTTaGGCTAATTTTGTGAGGCGA +
Preference number: 5 (lower is better)
Translates to: FTFMANTTRYLQGHITQIRSLYS*ANFVRR
Trigger: TCGCCTCACAAAATTAGCCAAAGAGTATAAGGACCG...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGGGAAAATATGTCGCTaGGTCTCTAAATACATATCC +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWGKICR*VSKYIS
Trigger: GGATATGTATTTAGAGACCAAGCGACATATTTTCCC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACATTCTTCTTCATGACCTaGAGGATTTTCTTGTCTGCC +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITFFFMT*RIFLSA
Trigger: GGCAGACAAGAAAATCCTCAAGGTCATGAAGAAGAA...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTAATACTTATTCAGGATaGACACCTGGTTCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLNTYSG*TPGSSS
Trigger: TGAAGAAGAACCAGGTGTCAATCCTGAATAAGTATT...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACAGTCATGTTGATAATGTaGAAGCGACTCCGTAGCCTT +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATVMLIM*KRLRSL
Trigger: AAGGCTACGGAGTCGCTTCAACATTATCAACATGAC...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAGGACTCATCAGCTATTaGGGTGTCCACAAAAATGAA +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITGLISY*GVHKNE
Trigger: TTCATTTTTGTGGACACCCAAATAGCTGATGAGTCC...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAAAGTTGATCAGTGACTaGATGAAGTTCTGTTCCCCT +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITKLISD*MKFCSP
Trigger: AGGGGAACAGAACTTCATCAAGTCACTGATCAACTT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTTTGTATTCATCCATGTaGAGCTTGCCAGAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: FTFMANTTRYLQGHITQILYSSM*SLPEVS
Trigger: GGAGACTTCTGGCAAGCTCAACATGGATGAATACAA...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACCACGTAGAAAGAAGTaGTATTCATCCATGTTGAGC +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITPRRKK*YSSMLS
Trigger: GCTCAACATGGATGAATACAACTTCTTTCTACGTGG...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTAGCTGCAGGAACTTTTaGCGTTCAAGTAACACAGAG +
Preference number: 5 (lower is better)
Translates to: FTFMANTTRYLQGHITQISCRNF*RSSNTE
Trigger: CTCTGTGTTACTTGAACGCAAAAAGTTCCTGCAGCT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGGCATCAAAGATGCAATaGAAAATCTCTTCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWASKMQ*KISSRL
Trigger: AAGCCTGGAAGAGATTTTCAATTGCATCTTTGATGC...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTAGGTGGCTCCTGTACTaGTCAAAGTTGACATCCAGC +
Preference number: 5 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFRWLLY*SKLTSS
Trigger: GCTGGATGTCAACTTTGACAAGTACAGGAGCCACCT...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp GCTTGTTGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTCAAACTTGAAGGATTaGTACTTTGCTCCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: ACCRGCFTALSSNTTLSLSNLKD*YFAPRK
Trigger: TTTCCTTGGAGCAAAGTACAAATCCTTCAAGTTTGA...AAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACAACAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS-3UTR CAA 90 bp CAGCGACATCACTGGTTTAGTCAGATAGTGGAGTGGTTTTTGATTTTTGTTTTTCGTTGCACCAGCTCTTaGTCCTTTATCACCATCTCA +
Preference number: 5 (lower is better)
Translates to: QRHHWFSQIVEWFLIFVFRCTSS*SFITIS
Trigger: TGAGATGGTGATAAAGGACAAAGAGCTGGTGCAACG...AAAAACAAAAATCAAAAACCACTCCACTATCTGACTAAACCAGTGATGTCGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS-3UTR CAA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCTGGTGAAATGGCCTTaGAATTCGAAATCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: FTFMANTTRYLQGHITQILVKWP*NSKSSR
Trigger: TCTGGAAGATTTCGAATTCAAAGGCCATTTCACCAG...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TGTCGCGGGTGTTTTACAGCACTGAGCTCCAATACAACTCTTTCACTTTTATGGTGGATTCTCAGCAACTaGATGTTGTCAAAGCATTTT +
Preference number: 5 (lower is better)
Translates to: CRGCFTALSSNTTLSLLWWILSN*MLSKHF
Trigger: AAAATGCTTTGACAACATCAAGTTGCTGAGAATCCA...CCATAAAAGTGAAAGAGTTGTATTGGAGCTCAGTGCTGTAAAACACCCGCGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATTCTTCTTCATGACCTaGAGGATTTTCTTGTCTGCC +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATFFFMT*RIFLSA
Trigger: GGCAGACAAGAAAATCCTCAAGGTCATGAAGAAGAA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp ACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTCGGAATACTTATTCAGGATaGACACCTGGTTCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: TFMANTTRYLQGHITQIRNTYSG*TPGSSS
Trigger: TGAAGAAGAACCAGGTGTCAATCCTGAATAAGTATT...CCGAATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATGTTCATATCTCTCATaGAGAGCAGCAGAACCTCTT +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATCSYLS*RAAEPL
Trigger: AAGAGGTTCTGCTGCTCTCAATGAGAGATATGAACA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACAAAACTGAATAGTAGTTaGTGGCGTTCGAAAAGGGTA +
Preference number: 5 (lower is better)
Translates to: NSFTFMANTTRYLQGHITKLNSS*WRSKRV
Trigger: TACCCTTTTCGAACGCCACAAACTACTATTCAGTTT...TGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp TTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATCACACAAATTATAATTATACTGAAATaGCGTGTTGGTCTGGCGGAT +
Preference number: 5 (lower is better)
Translates to: FTFMANTTRYLQGHITQIIIILK*RVGLAD
Trigger: ATCCGCCAGACCAACACGCAATTTCAGTATAATTAT...AATTTGTGTGATGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS-3UTR CAA 90 bp AATACAACTCTTTCACTTTTATGGCTAACACAACTAGGTATCTCCAGGGCCACATGGATTCTCAGCAACTaGATGTTGTCAAAGCATTTT +
Preference number: 5 (lower is better)
Translates to: NTTLSLLWLTQLGISRATWILSN*MLSKHF
Trigger: AAAATGCTTTGACAACATCAAGTTGCTGAGAATCCA...TGTGGCCCTGGAGATACCTAGTTGTGTTAGCCATAAAAGTGAAAGAGTTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp GGAGAACCCAATCGCCCGACCCCGCGCCCAGGTCTGTaGGCCCCAGCCGGAACGGGTCCAGCAGATGGCGCC +
Preference number: 6 (lower is better)
Translates to: GEPNRPTPRPGL*APAGTGPADGA
Trigger: GGCGCCATCTGCTGGACCCGTTCCGGCTGGGGCGCACAGACCTGGGCGCGGGGTCGGGCGATTGGGTTCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS CCA 72 bp TCTCGGAGGAGCCGAGCAGCGATGGGGGCCTGGCCCTaGCCCAGGGACAGGGCGTGGAAGCGCTGGGCCATG +
Preference number: 6 (lower is better)
Translates to: SRRSRAAMGAWP*PRDRAWKRWAM
Trigger: CATGGCCCAGCGCTTCCACGCCCTGTCCCTGGGCCAGGGCCAGGCCCCCATCGCTGCTCGGCTCCTCCGAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 72 bp AGGTCTGTGCGCCCCAGCCGGAACGGGTCCAGCAGATaGCGCCGGGCGCCAGGCCGGCGAGGGATATTCGCG +
Preference number: 6 (lower is better)
Translates to: RSVRPSRNGSSR*RRAPGRRGIFA
Trigger: CGCGAATATCCCTCGCCGGCCTGGCGCCCGGCGCCATCTGCTGGACCCGTTCCGGCTGGGGCGCACAGACCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS GCA 72 bp TGCAGCTCTGGCTCACTGACAGCCGGGGCATTCCCCTaGTCCTGTGTGGCCACAGCAGCCCGAGTGGCCCGC +
Preference number: 6 (lower is better)
Translates to: CSSGSLTAGAFP*SCVATAARVAR
Trigger: GCGGGCCACTCGGGCTGCTGTGGCCACACAGGAGCAGGGGAATGCCCCGGCTGTCAGTGAGCCAGAGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 72 bp ACAGGAGGCCGGGCCCGGCTGGCCCACAGCTCAAACTaGTCCACACGCATGGCCAAGTCCCGGGTCCAGGCA +
Preference number: 6 (lower is better)
Translates to: TGGRARLAHSSN*STRMAKSRVQA
Trigger: TGCCTGGACCCGGGACTTGGCCATGCGTGTGGAGCAGTTTGAGCTGTGGGCCAGCCGGGCCCGGCCTCCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp GCGGGTTCCCTCCGGTCACTCATCCCAGAGGAAAGCTaGACCCCGCTGCGGGAGTCACACTCCCGGGGACGC +
Preference number: 6 (lower is better)
Translates to: AGSLRSLIPEES*TPLRESHSRGR
Trigger: GCGTCCCCGGGAGTGTGACTCCCGCAGCGGGGTGCAGCTTTCCTCTGGGATGAGTGACCGGAGGGAACCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575498.1
CDS TCA 72 bp CTCCTGTGTGGCCACAGCAGCCCGAGTGGCCCGCCCTaGCCAGCTTGCCTGGGAGCTTCCTCGGCCACTCAA +
Preference number: 6 (lower is better)
Translates to: LLCGHSSPSGPP*PACLGASSATQ
Trigger: TTGAGTGGCCGAGGAAGCTCCCAGGCAAGCTGGTCAGGGCGGGCCACTCGGGCTGCTGTGGCCACACAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 72 bp CATTCCCCTGCTCCTGTGTGGCCACAGCAGCCCGAGTaGCCCGCCCTGACCAGCTTGCCTGGGAGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: HSPAPVWPQQPE*PALTSLPGSFL
Trigger: GAGGAAGCTCCCAGGCAAGCTGGTCAGGGCGGGCCACTCGGGCTGCTGTGGCCACACAGGAGCAGGGGAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 72 bp GGCTGGAGGGCAGGGACTGCAGAACGCTCTGGGCGATaGAGGTCTTCCCAGTCCCCACGGGACCCACCAGCA +
Preference number: 6 (lower is better)
Translates to: GWRAGTAERSGR*RSSQSPRDPPA
Trigger: TGCTGGTGGGTCCCGTGGGGACTGGGAAGACCTCCATCGCCCAGAGCGTTCTGCAGTCCCTGCCCTCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 72 bp GACCACTGGCTGGAGGGCAGGGACTGCAGAACGCTCTaGGCGATGGAGGTCTTCCCAGTCCCCACGGGACCC +
Preference number: 6 (lower is better)
Translates to: DHWLEGRDCRTL*AMEVFPVPTGP
Trigger: GGGTCCCGTGGGGACTGGGAAGACCTCCATCGCCCAGAGCGTTCTGCAGTCCCTGCCCTCCAGCCAGTGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp TGGCCACAGCAGCCCGAGTGGCCCGCCCTGACCAGCTaGCCTGGGAGCTTCCTCGGCCACTCAATCGCTGCT +
Preference number: 6 (lower is better)
Translates to: WPQQPEWPALTS*PGSFLGHSIAA
Trigger: AGCAGCGATTGAGTGGCCGAGGAAGCTCCCAGGCAAGCTGGTCAGGGCGGGCCACTCGGGCTGCTGTGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CAA 72 bp CCCTCCCTAGACCGACCGATGGGCCACTCTAAGAAGTaGCCCCTCGCAGCCCTCTCGGGCCGGCGTCTGCAC +
Preference number: 6 (lower is better)
Translates to: PSLDRPMGHSKK*PLAALSGRRLH
Trigger: GTGCAGACGCCGGCCCGAGAGGGCTGCGAGGGGCAACTTCTTAGAGTGGCCCATCGGTCGGTCTAGGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS TCA 72 bp GGGCGAGAGACAGTGAGCCACCGCCCCGCAGGACATTaGAAAGGCAGGGAGAACCCAATCGCCCGACCCCGC +
Preference number: 6 (lower is better)
Translates to: GRETVSHRPAGH*KGRENPIARPR
Trigger: GCGGGGTCGGGCGATTGGGTTCTCCCTGCCTTTTCAATGTCCTGCGGGGCGGTGGCTCACTGTCTCTCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS GCA 72 bp ATAGCCGCCCATACAGCTCCATGGCCCGCACCCACATaGAGAGGGACTTGGCAGCCAGGGAGACGCGGCCGA +
Preference number: 6 (lower is better)
Translates to: IAAHTAPWPAPT*RGTWQPGRRGR
Trigger: TCGGCCGCGTCTCCCTGGCTGCCAAGTCCCTCTGCATGTGGGTGCGGGCCATGGAGCTGTATGGGCGGCTAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 72 bp AGGCGCCCGAATGCTGGACATGGAGAAGGGCACACGTaGAGGCAGGAGGGCCTCCGGAAGGAGGGACTCCAG +
Preference number: 6 (lower is better)
Translates to: RRPNAGHGEGHT*RQEGLRKEGLQ
Trigger: CTGGAGTCCCTCCTTCCGGAGGCCCTCCTGCCTCCACGTGTGCCCTTCTCCATGTCCAGCATTCGGGCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575498.1
CDS CAA 90 bp GCTCCTGTGTGGCCACAGCAGCCCGAGTGGCCCGCCCTGACCAGCTaGCCTGGGAGCTTCCTCGGCCACTCAATCGCTGCTTCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: APVWPQQPEWPALTS*PGSFLGHSIAASSQ
Trigger: CTGAGAAGAAGCAGCGATTGAGTGGCCGAGGAAGCTCCCAGGCAAGCTGGTCAGGGCGGGCCACTCGGGCTGCTGTGGCCACACAGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS TCA 72 bp CCAAGTCGTGCTTCAGGGCATCCACGAGCTGCAAGCTaGCCCCCAGTTCCTCCAGTGTCTGCGGAGGGCGGC +
Preference number: 6 (lower is better)
Translates to: PSRASGHPRAAS*PPVPPVSAEGG
Trigger: GCCGCCCTCCGCAGACACTGGAGGAACTGGGGGTCAGCTTGCAGCTCGTGGATGCCCTGAAGCACGACTTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS TCA 72 bp GCGTGGCCAGGGCAGAGTACAGCTTGCAGAGGGAGGTaGTACCGCTGTACTCGGGCAGGGGCACCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: AWPGQSTACRGR*YRCTRAGAPAP
Trigger: AGGAGCTGGTGCCCCTGCCCGAGTACAGCGGTATCACCTCCCTCTGCAAGCTGTACTCTGCCCTGGCCACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp GCAAGCCTGTGGAAGGTGTCCAGCAGAAGCACGCCGTaGGGCACGTCCCGCACCAACTCGAAGGCTGAGGTG +
Preference number: 6 (lower is better)
Translates to: ASLWKVSSRSTP*GTSRTNSKAEV
Trigger: CACCTCAGCCTTCGAGTTGGTGCGGGACGTGCCGCACGGCGTGCTTCTGCTGGACACCTTCCACAGGCTTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 72 bp ACAGCAGCCCGAGTGGCCCGCCCTGACCAGCTTGCCTaGGAGCTTCCTCGGCCACTCAATCGCTGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: TAARVARPDQLA*ELPRPLNRCFF
Trigger: GAAGAAGCAGCGATTGAGTGGCCGAGGAAGCTCCCAGGCAAGCTGGTCAGGGCGGGCCACTCGGGCTGCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS TCA 72 bp CACGCCGTGCGGCACGTCCCGCACCAACTCGAAGGCTaGGGTGATCAGGTTCTGGGTCATCACCTCCAGGTC +
Preference number: 6 (lower is better)
Translates to: HAVRHVPHQLEG*GDQVLGHHLQV
Trigger: GACCTGGAGGTGATGACCCAGAACCTGATCACCTCAGCCTTCGAGTTGGTGCGGGACGTGCCGCACGGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS TCA 72 bp GACCTCGATCTGGAAGGTGGTGTAGTCGCAGATGGATaGAGCCAGGCGGGCCAGACTCTGGCGTCCGCTGCC +
Preference number: 6 (lower is better)
Translates to: DLDLEGGVVADG*SQAGQTLASAA
Trigger: GGCAGCGGACGCCAGAGTCTGGCCCGCCTGGCTTCATCCATCTGCGACTACACCACCTTCCAGATCGAGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 72 bp TGCAGAGGGACTTGGCAGCCAGGGAGACGCGGCCGATaGTATCAGGCTGGAAGTCAGGCTGGGCGCAGTAGG +
Preference number: 6 (lower is better)
Translates to: CRGTWQPGRRGR*YQAGSQAGRSR
Trigger: CCTACTGCGCCCAGCCTGACTTCCAGCCTGATATCATCGGCCGCGTCTCCCTGGCTGCCAAGTCCCTCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS TCA 72 bp TGGGCCTCAGCGAGCGCGGCTTGCTTCTCCCGAAGCTaGGCCAAGGCAGCGTTCATTCGGATTCGCTTGGGC +
Preference number: 6 (lower is better)
Translates to: WASASAACFSRS*AKAAFIRIRLG
Trigger: GCCCAAGCGAATCCGAATGAACGCTGCCTTGGCTCAGCTTCGGGAGAAGCAAGCCGCGCTCGCTGAGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS TCA 72 bp CAGGTGTCATGGCCCCAGACCGCAGGTCAATGCCGATaGCAAAGGAGGCTCGGTCTGAGCTGCCTGCCCGGT +
Preference number: 6 (lower is better)
Translates to: QVSWPQTAGQCR*QRRLGLSCLPG
Trigger: ACCGGGCAGGCAGCTCAGACCGAGCCTCCTTTGTCATCGGCATTGACCTGCGGTCTGGGGCCATGACACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp CAGGTCATGACTCTGTCGATGCGACGCCGGAGGATGTaGACCCAGCGCGCCTTTCCGGAATACTGGGCCACG +
Preference number: 6 (lower is better)
Translates to: QVMTLSMRRRRM*TQRAFPEYWAT
Trigger: CGTGGCCCAGTATTCCGGAAAGGCGCGCTGGGTGCACATCCTCCGGCGTCGCATCGACAGAGTCATGACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
ENST00000575498.1
CDS GCA 72 bp GGTCAGGAAGGGTCCCATGTAGGACAGGAAGGCAGCTaGCAGGAGACAGTCCCCCACCAGGTAGCCCAGGTC +
Preference number: 6 (lower is better)
Translates to: GQEGSHVGQEGS*QETVPHQVAQV
Trigger: GACCTGGGCTACCTGGTGGGGGACTGTCTCCTGGCAGCTGCCTTCCTGTCCTACATGGGACCCTTCCTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 72 bp GTCTGTGCGGACATGTTGACAACGAGCACCGACCACTaGCTGGAGGGCAGGGACTGCAGAACGCTCTGGGCG +
Preference number: 6 (lower is better)
Translates to: VCADMLTTSTDH*LEGRDCRTLWA
Trigger: CGCCCAGAGCGTTCTGCAGTCCCTGCCCTCCAGCCAGTGGTCGGTGCTCGTTGTCAACATGTCCGCACAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 72 bp CCCGGCTGGCCCACAGCTCAAACTGCTCCACACGCATaGCCAAGTCCCGGGTCCAGGCAGCCAATGGCTTTT +
Preference number: 6 (lower is better)
Translates to: PGWPTAQTAPHA*PSPGSRQPMAF
Trigger: AAAAGCCATTGGCTGCCTGGACCCGGGACTTGGCCATGCGTGTGGAGCAGTTTGAGCTGTGGGCCAGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 72 bp CAGACAACCAGAAGATCACAGGAGGCCGGGCCCGGCTaGCCCACAGCTCAAACTGCTCCACACGCATGGCCA +
Preference number: 6 (lower is better)
Translates to: QTTRRSQEAGPG*PTAQTAPHAWP
Trigger: TGGCCATGCGTGTGGAGCAGTTTGAGCTGTGGGCCAGCCGGGCCCGGCCTCCTGTGATCTTCTGGTTGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp CTCAGCTACCTCCCGCAGCTTCTCCTGGGCCTCAGCGAGCGCGGCTaGCTTCTCCCGAAGCTGAGCCAAGGCAGCGTTCATTCGGATTCG +
Preference number: 6 (lower is better)
Translates to: LSYLPQLLLGLSERG*LLPKLSQGSVHSDS
Trigger: CGAATCCGAATGAACGCTGCCTTGGCTCAGCTTCGGGAGAAGCAAGCCGCGCTCGCTGAGGCCCAGGAGAAGCTGCGGGAGGTAGCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS GCA 72 bp GGAGTACATGCCCTTGGCGCTCTTCTTGCGGCTCTCTaGAGGCCGGAAGTGGATCGTGGGCATGAGGCAGAC +
Preference number: 6 (lower is better)
Translates to: GVHALGALLAAL*RPEVDRGHEAD
Trigger: GTCTGCCTCATGCCCACGATCCACTTCCGGCCTGCAGAGAGCCGCAAGAAGAGCGCCAAGGGCATGTACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp CACCCCGCCCAGGTCTACCCCTCAGGGACCCAGGGCTaGAAGGCTCCGGGACTAAAGGAAAGTAGCCACATC +
Preference number: 6 (lower is better)
Translates to: HPAQVYPSGTQG*KAPGLKESSHI
Trigger: GATGTGGCTACTTTCCTTTAGTCCCGGAGCCTTCAAGCCCTGGGTCCCTGAGGGGTAGACCTGGGCGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS CAA 90 bp CAGTGTAGACCATCCCGCAGCGGGATACAGTGGCCGGAGAGGCCATaGCCAGGTCCTCCACTTCAAACAGGAGAGACACCTGCTCGGGCA +
Preference number: 6 (lower is better)
Translates to: QCRPSRSGIQWPERP*PGPPLQTGETPARA
Trigger: TGCCCGAGCAGGTGTCTCTCCTGTTTGAAGTGGAGGACCTGGCAATGGCCTCTCCGGCCACTGTATCCCGCTGCGGGATGGTCTACACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 72 bp CACGCGTTCAATGAGGTAGGCGAAGAGGCTGTCCGATaGCTCAGGCACCTGCTCCACCCGGGCCTGGTCTAT +
Preference number: 6 (lower is better)
Translates to: HAFNEVGEEAVR*LRHLLHPGLVY
Trigger: ATAGACCAGGCCCGGGTGGAGCAGGTGCCTGAGTCATCGGACAGCCTCTTCGCCTACCTCATTGAACGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp ACGTTGGCCAAGTCGTGCTTCAGGGCATCCACGAGCTaGAAGCTGACCCCCAGTTCCTCCAGTGTCTGCGGA +
Preference number: 6 (lower is better)
Translates to: TLAKSCFRASTS*KLTPSSSSVCG
Trigger: TCCGCAGACACTGGAGGAACTGGGGGTCAGCTTGCAGCTCGTGGATGCCCTGAAGCACGACTTGGCCAACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS GCA 72 bp CATCCCGCAGCGGGATACAGTGGCCGGAGAGGCCATTaGCAGGTCCTCCACTTCAAACAGGAGAGACACCTG +
Preference number: 6 (lower is better)
Translates to: HPAAGYSGRRGH*QVLHFKQERHL
Trigger: CAGGTGTCTCTCCTGTTTGAAGTGGAGGACCTGGCAATGGCCTCTCCGGCCACTGTATCCCGCTGCGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp GGCCGGAAGTGGATCGTGGGCATGAGGCAGACAAGCTaGATGGGCTCTGCCTCCACCAAGCAGGAGTTCTTC +
Preference number: 6 (lower is better)
Translates to: GRKWIVGMRQTS*MGSASTKQEFF
Trigger: GAAGAACTCCTGCTTGGTGGAGGCAGAGCCCATGCAGCTTGTCTGCCTCATGCCCACGATCCACTTCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp AAGGTAGGATGGCAGGAAGCGGGGATCTCGGACAGGTaGTCAGAATCCCAGGCGCAAAGTCTGAGGCGCTGG +
Preference number: 6 (lower is better)
Translates to: KVGWQEAGISDR*SESQAQSLRRW
Trigger: CCAGCGCCTCAGACTTTGCGCCTGGGATTCTGAGCACCTGTCCGAGATCCCCGCTTCCTGCCATCCTACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS CCA 72 bp AGGTCTTCCCAGTCCCCACGGGACCCACCAGCAGAATaGGATTCTGGTTGGCCACCAAGCTGCTCACCAGGT +
Preference number: 6 (lower is better)
Translates to: RSSQSPRDPPAE*DSGWPPSCSPG
Trigger: ACCTGGTGAGCAGCTTGGTGGCCAACCAGAATCCCATTCTGCTGGTGGGTCCCGTGGGGACTGGGAAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp CCATCCCGCAGCGGGATACAGTGGCCGGAGAGGCCATaGCCAGGTCCTCCACTTCAAACAGGAGAGACACCT +
Preference number: 6 (lower is better)
Translates to: PSRSGIQWPERP*PGPPLQTGETP
Trigger: AGGTGTCTCTCCTGTTTGAAGTGGAGGACCTGGCAATGGCCTCTCCGGCCACTGTATCCCGCTGCGGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp CACTCACCTGGCAGCATCGCCTTCTCCGGGGCAGCATaGGTATACCACAGGTGCCAGTCACGAGGGTACTGC +
Preference number: 6 (lower is better)
Translates to: HSPGSIAFSGAA*VYHRCQSRGYC
Trigger: GCAGTACCCTCGTGACTGGCACCTGTGGTATACCAATGCTGCCCCGGAGAAGGCGATGCTGCCAGGTGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 90 bp GCCTGGGAGCTTCCTCGGCCACTCAATCGCTGCTTCTTCTCAGCTTaGCTGGACATCGTGCAGGCAAAACCTTGCCACGCTGACCCTCCC +
Preference number: 6 (lower is better)
Translates to: AWELPRPLNRCFFSA*LDIVQAKPCHADPP
Trigger: GGGAGGGTCAGCGTGGCAAGGTTTTGCCTGCACGATGTCCAGCAAAGCTGAGAAGAAGCAGCGATTGAGTGGCCGAGGAAGCTCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS TCA 72 bp TCTGCCTCGGGCTCCACTGATTCTTCACTCTGTGCTTaGGGTCCCTCCAACCGTGGCTCAGGCTCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SASGSTDSSLCA*GPSNRGSGSSL
Trigger: CAAGGAGGAGCCTGAGCCACGGTTGGAGGGACCTCAAGCACAGAGTGAAGAATCAGTGGAGCCCGAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS TCA 72 bp TGTGCAGCTCCAGGAGGCGCCCAGCAGCCATCTCCCTaGGCAGAGTCGCGAACTTGTTCTGCCATTCATTGC +
Preference number: 6 (lower is better)
Translates to: CAAPGGAQQPSP*AESRTCSAIHC
Trigger: GCAATGAATGGCAGAACAAGTTCGCGACTCTGCTCAGGGAGATGGCTGCTGGGCGCCTCCTGGAGCTGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS TCA 72 bp CCGCAGGTCAATGCCGATGACAAAGGAGGCTCGGTCTaGGCTGCCTGCCCGGTTGGGATAGTAATAGCAGGG +
Preference number: 6 (lower is better)
Translates to: PQVNADDKGGSV*AACPVGIVIAG
Trigger: CCCTGCTATTACTATCCCAACCGGGCAGGCAGCTCAGACCGAGCCTCCTTTGTCATCGGCATTGACCTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp ACGAGCTGCAAGCTGACCCCCAGTTCCTCCAGTGTCTaGGGAGGGCGGCTGATTTTCTCTGCGTTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: TSCKLTPSSSSV*GGRLIFSAFSF
Trigger: GAAGGAGAACGCAGAGAAAATCAGCCGCCCTCCGCAGACACTGGAGGAACTGGGGGTCAGCTTGCAGCTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS GCA 72 bp AACAGCCCGTGGGCCGTGGTCTCCATGGTTTCCGTCTaGAGGATCAGGAACCGGCCAGTCTTCCACTCATTC +
Preference number: 6 (lower is better)
Translates to: NSPWAVVSMVSV*RIRNRPVFHSF
Trigger: GAATGAGTGGAAGACTGGCCGGTTCCTGATCCTGCAGACGGAAACCATGGAGACCACGGCCCACGGGCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS GCA 72 bp TTACCAGCCGCGATGTTGATGACCAGTGAGTCCTTCTaGTCCTCCAGCTCAGGCCGCTCCTTCCGCACCACA +
Preference number: 6 (lower is better)
Translates to: LPAAMLMTSESF*SSSSGRSFRTT
Trigger: TGTGGTGCGGAAGGAGCGGCCTGAGCTGGAGGAGCAGAAGGACTCACTGGTCATCAACATCGCGGCTGGTAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 72 bp TCCCGCACCAACTCGAAGGCTGAGGTGATCAGGTTCTaGGTCATCACCTCCAGGTCCTTGATTCCGGCACGG +
Preference number: 6 (lower is better)
Translates to: SRTNSKAEVIRF*VITSRSLIPAR
Trigger: CCGTGCCGGAATCAAGGACCTGGAGGTGATGACCCAGAACCTGATCACCTCAGCCTTCGAGTTGGTGCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 72 bp CGTAGTCAGTGTAGACCATCCCGCAGCGGGATACAGTaGCCGGAGAGGCCATTGCCAGGTCCTCCACTTCAA +
Preference number: 6 (lower is better)
Translates to: RSQCRPSRSGIQ*PERPLPGPPLQ
Trigger: TTGAAGTGGAGGACCTGGCAATGGCCTCTCCGGCCACTGTATCCCGCTGCGGGATGGTCTACACTGACTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 72 bp TGTTCACCAGCTGCACATCATCCAGCAGGGAGCCGGTaGCCTCATTCAGCAGCCGCAGGATCTCATCCTCCA +
Preference number: 6 (lower is better)
Translates to: CSPAAHHPAGSR*PHSAAAGSHPP
Trigger: TGGAGGATGAGATCCTGCGGCTGCTGAATGAGGCCACCGGCTCCCTGCTGGATGATGTGCAGCTGGTGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 72 bp ACTCACCTGGCAGCATCGCCTTCTCCGGGGCAGCATTaGTATACCACAGGTGCCAGTCACGAGGGTACTGCT +
Preference number: 6 (lower is better)
Translates to: THLAASPSPGQH*YTTGASHEGTA
Trigger: AGCAGTACCCTCGTGACTGGCACCTGTGGTATACCAATGCTGCCCCGGAGAAGGCGATGCTGCCAGGTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 72 bp ATGATGAAGGAGGTCACGCAGAAGGCCACGCGGTCCTaGCGCAGGGAGCGAACGATCAGCATCCGTTGCATT +
Preference number: 6 (lower is better)
Translates to: MMKEVTQKATRS*RRERTISIRCI
Trigger: AATGCAACGGATGCTGATCGTTCGCTCCCTGCGCCAGGACCGCGTGGCCTTCTGCGTGACCTCCTTCATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 90 bp TCCAGGAGGCGCCCAGCAGCCATCTCCCTGAGCAGAGTCGCGAACTaGTTCTGCCATTCATTGCAGTGCTGCACCAGGGAGAACTTGAGG +
Preference number: 6 (lower is better)
Translates to: SRRRPAAISLSRVAN*FCHSLQCCTRENLR
Trigger: CCTCAAGTTCTCCCTGGTGCAGCACTGCAATGAATGGCAGAACAAGTTCGCGACTCTGCTCAGGGAGATGGCTGCTGGGCGCCTCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CAA 90 bp GACTTCATATTCAGCACAGGCGGCTCGATGAAGCGGGAGCCAAGGTaGGTGATGATGAAGGAGGTCACGCAGAAGGCCACGCGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: DFIFSTGGSMKREPR*VMMKEVTQKATRSW
Trigger: CCAGGACCGCGTGGCCTTCTGCGTGACCTCCTTCATCATCACCAACCTTGGCTCCCGCTTCATCGAGCCGCCTGTGCTGAATATGAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 90 bp CCGGTGGCCTCATTCAGCAGCCGCAGGATCTCATCCTCCAGCTCCTaGAGCTTCCTTTTACCAGCCGCGATGTTGATGACCAGTGAGTCC +
Preference number: 6 (lower is better)
Translates to: PVASFSSRRISSSSS*SFLLPAAMLMTSES
Trigger: GGACTCACTGGTCATCAACATCGCGGCTGGTAAAAGGAAGCTCAAGGAGCTGGAGGATGAGATCCTGCGGCTGCTGAATGAGGCCACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 90 bp GCATTTTCCCACTCACCTGGCAGCATCGCCTTCTCCGGGGCAGCATaGGTATACCACAGGTGCCAGTCACGAGGGTACTGCTCAAAGGAG +
Preference number: 6 (lower is better)
Translates to: AFSHSPGSIAFSGAA*VYHRCQSRGYCSKE
Trigger: CTCCTTTGAGCAGTACCCTCGTGACTGGCACCTGTGGTATACCAATGCTGCCCCGGAGAAGGCGATGCTGCCAGGTGAGTGGGAAAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS GCA 72 bp GTGTTCCAGAATGGCATCATGCTCCTGTGTCCACACTaGATCCGCCAGTCCTGTCAGCGCAGCTCGGGAAAG +
Preference number: 6 (lower is better)
Translates to: VFQNGIMLLCPH*IRQSCQRSSGK
Trigger: CTTTCCCGAGCTGCGCTGACAGGACTGGCGGATGCAGTGTGGACACAGGAGCATGATGCCATTCTGGAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 72 bp TGCCCATGTGGGCTCGTTGCCTCGAAGAATCATAACTaGCTGCATCACTATCTCCACTTGGGCTGGGGGCCG +
Preference number: 6 (lower is better)
Translates to: CPCGLVASKNHN*LHHYLHLGWGP
Trigger: CGGCCCCCAGCCCAAGTGGAGATAGTGATGCAGGCAGTTATGATTCTTCGAGGCAACGAGCCCACATGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS GCA 72 bp CGGTCCTGGCGCAGGGAGCGAACGATCAGCATCCGTTaGATTTCATTGCAGGCATTTTCCCACTCACCTGGC +
Preference number: 6 (lower is better)
Translates to: RSWRRERTISIR*ISLQAFSHSPG
Trigger: GCCAGGTGAGTGGGAAAATGCCTGCAATGAAATGCAACGGATGCTGATCGTTCGCTCCCTGCGCCAGGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 72 bp CAGCATGCCCGCCTTCTCCTGGCTGATTCGCAGCAATaGGGTATCCAACCGCCGAATGCAATCCTTGTCCAG +
Preference number: 6 (lower is better)
Translates to: QHARLLLADSQQ*GIQPPNAILVQ
Trigger: CTGGACAAGGATTGCATTCGGCGGTTGGATACCCCATTGCTGCGAATCAGCCAGGAGAAGGCGGGCATGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
ENST00000575498.1
CDS CCA 72 bp GGAAGCGCTGTACCACGGTGTTGTACATGTCCAGGGTaGCCTCTGTCACCACGTTCCCAATGGGCTTCACCT +
Preference number: 6 (lower is better)
Translates to: GSAVPRCCTCPG*PLSPRSQWASP
Trigger: AGGTGAAGCCCATTGGGAACGTGGTGACAGAGGCCACCCTGGACATGTACAACACCGTGGTACAGCGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 72 bp GAAGCTGAGCCAAGGCAGCGTTCATTCGGATTCGCTTaGGCTCCACCACCCGATATAGCCGCCCATACAGCT +
Preference number: 6 (lower is better)
Translates to: EAEPRQRSFGFA*APPPDIAAHTA
Trigger: AGCTGTATGGGCGGCTATATCGGGTGGTGGAGCCCAAGCGAATCCGAATGAACGCTGCCTTGGCTCAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 72 bp AAGGCACTGGCCCCCTTCAAGGCCCAGTGCAGTTTCTaGAGTCCCGGGTGGATCTTCTTATCCAGGAGCCGA +
Preference number: 6 (lower is better)
Translates to: KALAPFKAQCSF*SPGWIFLSRSR
Trigger: TCGGCTCCTGGATAAGAAGATCCACCCGGGACTCAAGAAACTGCACTGGGCCTTGAAGGGGGCCAGTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp CCAGTTCTCCTCCCAGTCTCGTGCGATCTCCCAGATTaGCTGGAGGGCATCGAGCTCCTTCTCCAGGTTCTG +
Preference number: 6 (lower is better)
Translates to: PVLLPVSCDLPD*LEGIELLLQVL
Trigger: CAGAACCTGGAGAAGGAGCTCGATGCCCTCCAGCAAATCTGGGAGATCGCACGAGACTGGGAGGAGAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp AGAGACACCTGCTCGGGCATCGCGATGCGCTCGCCGTaGATGAGGGTCAACACCTTGTTATCGTCCATGACG +
Preference number: 6 (lower is better)
Translates to: RDTCSGIAMRSP*MRVNTLLSSMT
Trigger: CGTCATGGACGATAACAAGGTGTTGACCCTCATCAACGGCGAGCGCATCGCGATGCCCGAGCAGGTGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp GCAGCCATCTCCCTGAGCAGAGTCGCGAACTTGTTCTGCCATTCATaGCAGTGCTGCACCAGGGAGAACTTGAGGTGCGAACAGTCCAGC +
Preference number: 6 (lower is better)
Translates to: AAISLSRVANLFCHS*QCCTRENLRCEQSS
Trigger: GCTGGACTGTTCGCACCTCAAGTTCTCCCTGGTGCAGCACTGCAATGAATGGCAGAACAAGTTCGCGACTCTGCTCAGGGAGATGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS TCA 72 bp GGTAGTTGTAGCGAACAGTGTCGACGGTGGGCACCATaGTCTTATAGAAGGGGGCGTTTGGAGGGTAGCGCC +
Preference number: 6 (lower is better)
Translates to: GSCSEQCRRWAP*SYRRGRLEGSA
Trigger: GGCGCTACCCTCCAAACGCCCCCTTCTATAAGATCATGGTGCCCACCGTCGACACTGTTCGCTACAACTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 72 bp TCTCGGACAGGTGCTCAGAATCCCAGGCGCAAAGTCTaGGGCGCTGGGCACTCTCTTTTCATTAGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: SRTGAQNPRRKV*GAGHSLFIRLQ
Trigger: CTGCAGCCTAATGAAAAGAGAGTGCCCAGCGCCTCAGACTTTGCGCCTGGGATTCTGAGCACCTGTCCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS GCA 72 bp GTAGGGTCCTGGGCAAAGTGTTCCAGAATGGCATCATaGTCCTGTGTCCACACTGCATCCGCCAGTCCTGTC +
Preference number: 6 (lower is better)
Translates to: VGSWAKCSRMAS*SCVHTASASPV
Trigger: GACAGGACTGGCGGATGCAGTGTGGACACAGGAGCATGATGCCATTCTGGAACACTTTGCCCAGGACCCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 72 bp TCCACAGTCTCCTGGGCACTGAGCATCTCCTTTATCTaGCGGGTCCAGTGGATCATGGAGGTCTCTAGCCGT +
Preference number: 6 (lower is better)
Translates to: STVSWALSISFI*RVQWIMEVSSR
Trigger: ACGGCTAGAGACCTCCATGATCCACTGGACCCGGCAGATAAAGGAGATGCTCAGTGCCCAGGAGACTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 72 bp CATGTGGGCTCGTTGCCTCGAAGAATCATAACTGCCTaGATCACTATCTCCACTTGGGCTGGGGGCCGTCCA +
Preference number: 6 (lower is better)
Translates to: HVGSLPRRIITA*ITISTWAGGRP
Trigger: TGGACGGCCCCCAGCCCAAGTGGAGATAGTGATGCAGGCAGTTATGATTCTTCGAGGCAACGAGCCCACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS GCA 72 bp TGCAGCGCTGCACAAAGGCATCAACCTGAGCAAAGATaGTGGTCTGATCTAGGACCCAGCCCCGACTGGAGA +
Preference number: 6 (lower is better)
Translates to: CSAAQRHQPEQR*WSDLGPSPDWR
Trigger: TCTCCAGTCGGGGCTGGGTCCTAGATCAGACCAGCATCTTTGCTCAGGTTGATGCCTTTGTGCAGCGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS GCA 72 bp CATCAGTCTCCAGAGAAGCATCAAGCTGCGCTTTCCTaGCTCAAACTAGAGCCTGAGGCGCATGCACCGTGG +
Preference number: 6 (lower is better)
Translates to: HQSPEKHQAALS*LKLEPEAHAPW
Trigger: CCACGGTGCATGCGCCTCAGGCTCTAGTTTGAGGCAGGAAAGCGCAGCTTGATGCTTCTCTGGAGACTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS CCA 72 bp TGGGCACTGAGCATCTCCTTTATCTGCCGGGTCCAGTaGATCATGGAGGTCTCTAGCCGTTGCACCAGCTCT +
Preference number: 6 (lower is better)
Translates to: WALSISFICRVQ*IMEVSSRCTSS
Trigger: AGAGCTGGTGCAACGGCTAGAGACCTCCATGATCCACTGGACCCGGCAGATAAAGGAGATGCTCAGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 72 bp ATTGCTCGTGTATGGGAGGGATCTGAGTCTCCACGTTaGCCAAGTCGTGCTTCAGGGCATCCACGAGCTGCA +
Preference number: 6 (lower is better)
Translates to: IARVWEGSESPR*PSRASGHPRAA
Trigger: TGCAGCTCGTGGATGCCCTGAAGCACGACTTGGCCAACGTGGAGACTCAGATCCCTCCCATACACGAGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CCA 72 bp GCCATAGTCAATCCAGAGGCGGATCAGCTCCAGGGGTaGCTGGGACCCAAACATGTCCTTAGCGGGCATATT +
Preference number: 6 (lower is better)
Translates to: AIVNPEADQLQG*LGPKHVLSGHI
Trigger: AATATGCCCGCTAAGGACATGTTTGGGTCCCAGCCACCCCTGGAGCTGATCCGCCTCTGGATTGACTATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 72 bp CTCGGCCACTCAATCGCTGCTTCTTCTCAGCTTTGCTaGACATCGTGCAGGCAAAACCTTGCCACGCTGACC +
Preference number: 6 (lower is better)
Translates to: LGHSIAASSQLC*TSCRQNLATLT
Trigger: GGTCAGCGTGGCAAGGTTTTGCCTGCACGATGTCCAGCAAAGCTGAGAAGAAGCAGCGATTGAGTGGCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS CCA 72 bp GAAGGTCACAGTGGTGCCTCTCTCAGAAAGGTAGGATaGCAGGAAGCGGGGATCTCGGACAGGTGCTCAGAA +
Preference number: 6 (lower is better)
Translates to: EGHSGASLRKVG*QEAGISDRCSE
Trigger: TTCTGAGCACCTGTCCGAGATCCCCGCTTCCTGCCATCCTACCTTTCTGAGAGAGGCACCACTGTGACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS CAA 72 bp TTGGAGGGTGGCTGCTCGATCTTGAAGATGCCCAGGTaGGCTCGGAGACTATTTTCCTCTTCCCGCATGGCC +
Preference number: 6 (lower is better)
Translates to: LEGGCSILKMPR*ARRLFSSSRMA
Trigger: GGCCATGCGGGAAGAGGAAAATAGTCTCCGAGCCAACCTGGGCATCTTCAAGATCGAGCAGCCACCCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp CCGCTGTACTCGGGCAGGGGCACCAGCTCCTTGCAGTaGTCCTTCTTAAAGGCCAGCATCTTGTTGATGAGC +
Preference number: 6 (lower is better)
Translates to: PLYSGRGTSSLQ*SFLKASILLMS
Trigger: GCTCATCAACAAGATGCTGGCCTTTAAGAAGGACAACTGCAAGGAGCTGGTGCCCCTGCCCGAGTACAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp GTGATGAAGAAGGCACTGGCCCCCTTCAAGGCCCAGTGCAGTTTCTaGAGTCCCGGGTGGATCTTCTTATCCAGGAGCCGAATACGCTCT +
Preference number: 6 (lower is better)
Translates to: VMKKALAPFKAQCSF*SPGWIFLSRSRIRS
Trigger: AGAGCGTATTCGGCTCCTGGATAAGAAGATCCACCCGGGACTCAAGAAACTGCACTGGGCCTTGAAGGGGGCCAGTGCCTTCTTCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp TGCTTACTGTCCAGCAGAGTTTGTTGGAAGACAACCCACTCCCCGTaGAGACTGTCCAGCATCTCCAGGACACTGTCCTCGACTGGCACC +
Preference number: 6 (lower is better)
Translates to: CLLSSRVCWKTTHSP*RLSSISRTLSSTGT
Trigger: GGTGCCAGTCGAGGACAGTGTCCTGGAGATGCTGGACAGTCTCAACGGGGAGTGGGTTGTCTTCCAACAAACTCTGCTGGACAGTAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CAA 90 bp TCAAACAGGAGAGACACCTGCTCGGGCATCGCGATGCGCTCGCCGTaGATGAGGGTCAACACCTTGTTATCGTCCATGACGGAGTTCATG +
Preference number: 6 (lower is better)
Translates to: SNRRDTCSGIAMRSP*MRVNTLLSSMTEFM
Trigger: CATGAACTCCGTCATGGACGATAACAAGGTGTTGACCCTCATCAACGGCGAGCGCATCGCGATGCCCGAGCAGGTGTCTCTCCTGTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp GCCTGGGAGCTTCCTCGGCCACTCAATCGCTGCTTCTTCTCAGCTTaGCTGGACATCGTGCAGGCAAAACCTGGGTCTATCGCTTTGAAG +
Preference number: 6 (lower is better)
Translates to: AWELPRPLNRCFFSA*LDIVQAKPGSIALK
Trigger: CTTCAAAGCGATAGACCCAGGTTTTGCCTGCACGATGTCCAGCAAAGCTGAGAAGAAGCAGCGATTGAGTGGCCGAGGAAGCTCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS TCA 72 bp CCAGCAGAGTTTGTTGGAAGACAACCCACTCCCCGTTaGGACTGTCCAGCATCTCCAGGACACTGTCCTCGA +
Preference number: 6 (lower is better)
Translates to: PAEFVGRQPTPR*DCPASPGHCPR
Trigger: TCGAGGACAGTGTCCTGGAGATGCTGGACAGTCTCAACGGGGAGTGGGTTGTCTTCCAACAAACTCTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS TCA 72 bp GCATGCCCTGGAACACCTTGGAGATGTCTCGAAGGTTaGAGAGGTAATGCATCTTGGTGGGCGTGGGCAGGA +
Preference number: 6 (lower is better)
Translates to: ACPGTPWRCLEG*RGNASWWAWAG
Trigger: TCCTGCCCACGCCCACCAAGATGCATTACCTCTTCAACCTTCGAGACATCTCCAAGGTGTTCCAGGGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 72 bp AGAACTGGTACATGGGGTCGATGCAGCCCATATCATTaGGCACGAAGAACAGGATTGATGCCCGCTGGGCGC +
Preference number: 6 (lower is better)
Translates to: RTGTWGRCSPYH*ARRTGLMPAGR
Trigger: GCGCCCAGCGGGCATCAATCCTGTTCTTCGTGCTCAATGATATGGGCTGCATCGACCCCATGTACCAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS TCA 72 bp AGGCTCATGAGTAGAGCAGTGCCCCTCTTGATCCAATaGTCAGGTGTCATGGCCCCAGACCGCAGGTCAATG +
Preference number: 6 (lower is better)
Translates to: RLMSRAVPLLIQ*SGVMAPDRRSM
Trigger: CATTGACCTGCGGTCTGGGGCCATGACACCTGATCATTGGATCAAGAGGGGCACTGCTCTACTCATGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp ACCACTTCACATTCAGGCGCAGGGCATCCTCCATCATaGGGTCCAGCCGAATCATGTACAGCATCCACTGCT +
Preference number: 6 (lower is better)
Translates to: TTSHSGAGHPPS*GPAESCTASTA
Trigger: AGCAGTGGATGCTGTACATGATTCGGCTGGACCGCATGATGGAGGATGCCCTGCGCCTGAATGTGAAGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp TGCTCAGTCACCTCTGTGGCTGTGATCTTGGAGGTATaGAGCGTGTTCACCAGCTGCACATCATCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: CSVTSVAVILEV*SVFTSCTSSSR
Trigger: CCTGCTGGATGATGTGCAGCTGGTGAACACGCTGCATACCTCCAAGATCACAGCCACAGAGGTGACTGAGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS GCA 72 bp ATCGCCTTCTCCGGGGCAGCATTGGTATACCACAGGTaGCAGTCACGAGGGTACTGCTCAAAGGAGTTCATG +
Preference number: 6 (lower is better)
Translates to: IAFSGAALVYHR*QSRGYCSKEFM
Trigger: CATGAACTCCTTTGAGCAGTACCCTCGTGACTGGCACCTGTGGTATACCAATGCTGCCCCGGAGAAGGCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS GCA 72 bp TTCCTCGGCCACTCAATCGCTGCTTCTTCTCAGCTTTaGTGGACATCGTGCAGGCAAAACCTTGCCACGCTG +
Preference number: 6 (lower is better)
Translates to: FLGHSIAASSQL*WTSCRQNLATL
Trigger: CAGCGTGGCAAGGTTTTGCCTGCACGATGTCCAGCAAAGCTGAGAAGAAGCAGCGATTGAGTGGCCGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS GCA 72 bp AAGTCTGAGGCGCTGGGCACTCTCTTTTCATTAGGCTaGAGCCTAACGGCACCTGTGGCTCTCCTTCCTCAT +
Preference number: 6 (lower is better)
Translates to: KSEALGTLFSLG*SLTAPVALLPH
Trigger: ATGAGGAAGGAGAGCCACAGGTGCCGTTAGGCTGCAGCCTAATGAAAAGAGAGTGCCCAGCGCCTCAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS CCA 72 bp AGGGCGCCAAGTAGGACGACTTGGCAAGGTGCAGGATaGATTCAACGTGCTTCACTCCCTTCTTCACCAGCT +
Preference number: 6 (lower is better)
Translates to: RAPSRTTWQGAG*IQRASLPSSPA
Trigger: AGCTGGTGAAGAAGGGAGTGAAGCACGTTGAATCCATCCTGCACCTTGCCAAGTCGTCCTACTTGGCGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 72 bp TCAATCTCCAGCAAGTTCCGTGTTATCTGTGGCCCCTaGGCACCAAAGAAGCAAGGAAGGGGACCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SISSKFRVICGP*APKKQGRGPCL
Trigger: CAAGCAGGGTCCCCTTCCTTGCTTCTTTGGTGCCCAGGGGCCACAGATAACACGGAACTTGCTGGAGATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 72 bp GATGTCCTCAATCTCCAGCAAGTTCCGTGTTATCTGTaGCCCCTGGGCACCAAAGAAGCAAGGAAGGGGACC +
Preference number: 6 (lower is better)
Translates to: DVLNLQQVPCYL*PLGTKEARKGT
Trigger: GGTCCCCTTCCTTGCTTCTTTGGTGCCCAGGGGCCACAGATAACACGGAACTTGCTGGAGATTGAGGACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 72 bp TTGTCAAAGTTGACATCCAGCATGCCCGCCTTCTCCTaGCTGATTCGCAGCAATGGGGTATCCAACCGCCGA +
Preference number: 6 (lower is better)
Translates to: LSKLTSSMPAFS*LIRSNGVSNRR
Trigger: TCGGCGGTTGGATACCCCATTGCTGCGAATCAGCCAGGAGAAGGCGGGCATGCTGGATGTCAACTTTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
ENST00000575498.1
CDS CCA 72 bp CCACTAATGCGTACCAGCAGCTTCTCTGACATCTCTTaGGCTCGCCAGCCAATGGTCAGAGTGGATGCCTTG +
Preference number: 6 (lower is better)
Translates to: PLMRTSSFSDIS*ARQPMVRVDAL
Trigger: CAAGGCATCCACTCTGACCATTGGCTGGCGAGCCCAAGAGATGTCAGAGAAGCTGCTGGTACGCATTAGTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 72 bp CGCATGGCCATCAGCATGGCCCGCACTTGTGTAATCTaGTCTAAGGCAGACATGTATCCCACGTTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: RMAISMARTCVI*SKADMYPTLLV
Trigger: CACCAGCAACGTGGGATACATGTCTGCCTTAGACCAGATTACACAAGTGCGGGCCATGCTGATGGCCATGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 72 bp GCATCTGCAAGCCAGCTACTACATGGATTGTCCATTTaGCCCTCCCGATCCAAGACCACACCCCCACGTAGA +
Preference number: 6 (lower is better)
Translates to: ASASQLLHGLSI*PSRSKTTPPRR
Trigger: TCTACGTGGGGGTGTGGTCTTGGATCGGGAGGGCCAAATGGACAATCCATGTAGTAGCTGGCTTGCAGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 72 bp AGCGCTGCACAAAGGCATCAACCTGAGCAAAGATGCTaGTCTGATCTAGGACCCAGCCCCGACTGGAGAACT +
Preference number: 6 (lower is better)
Translates to: SAAQRHQPEQRC*SDLGPSPDWRT
Trigger: AGTTCTCCAGTCGGGGCTGGGTCCTAGATCAGACCAGCATCTTTGCTCAGGTTGATGCCTTTGTGCAGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS CAA 72 bp TCCAGCAGAGTTTGTTGGAAGACAACCCACTCCCCGTaGAGACTGTCCAGCATCTCCAGGACACTGTCCTCG +
Preference number: 6 (lower is better)
Translates to: SSRVCWKTTHSP*RLSSISRTLSS
Trigger: CGAGGACAGTGTCCTGGAGATGCTGGACAGTCTCAACGGGGAGTGGGTTGTCTTCCAACAAACTCTGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CAA 72 bp GTGATACCGCTGTACTCGGGCAGGGGCACCAGCTCCTaGCAGTTGTCCTTCTTAAAGGCCAGCATCTTGTTG +
Preference number: 6 (lower is better)
Translates to: VIPLYSGRGTSS*QLSFLKASILL
Trigger: CAACAAGATGCTGGCCTTTAAGAAGGACAACTGCAAGGAGCTGGTGCCCCTGCCCGAGTACAGCGGTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp CCTAGCTGCCTCTTGGCCTCTGCCCATGTGGGCTCGTaGCCTCGAAGAATCATAACTGCCTGCATCACTATC +
Preference number: 6 (lower is better)
Translates to: PSCLLASAHVGS*PRRIITACITI
Trigger: GATAGTGATGCAGGCAGTTATGATTCTTCGAGGCAACGAGCCCACATGGGCAGAGGCCAAGAGGCAGCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 72 bp GTCTCCAGCTGCTCAGTCACCTCTGTGGCTGTGATCTaGGAGGTATGCAGCGTGTTCACCAGCTGCACATCA +
Preference number: 6 (lower is better)
Translates to: VSSCSVTSVAVI*EVCSVFTSCTS
Trigger: TGATGTGCAGCTGGTGAACACGCTGCATACCTCCAAGATCACAGCCACAGAGGTGACTGAGCAGCTGGAGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 72 bp GGAAAAGGGGCCAGGTGGCTCCTGTACTTGTCAAAGTaGACATCCAGCATGCCCGCCTTCTCCTGGCTGATT +
Preference number: 6 (lower is better)
Translates to: GKGARWLLYLSK*TSSMPAFSWLI
Trigger: AATCAGCCAGGAGAAGGCGGGCATGCTGGATGTCAACTTTGACAAGTACAGGAGCCACCTGGCCCCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570791.5
ENST00000575498.1
CDS CAA 72 bp CTTCCTCGGCCACTCAATCGCTGCTTCTTCTCAGCTTaGCTGGACATCGTGCAGGCAAAACCTTGCCACGCT +
Preference number: 6 (lower is better)
Translates to: LPRPLNRCFFSA*LDIVQAKPCHA
Trigger: AGCGTGGCAAGGTTTTGCCTGCACGATGTCCAGCAAAGCTGAGAAGAAGCAGCGATTGAGTGGCCGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS CAA 90 bp CAGAGGGAGGTGATACCGCTGTACTCGGGCAGGGGCACCAGCTCCTaGCAGTTGTCCTTCTTAAAGGCCAGCATCTTGTTGATGAGCTTT +
Preference number: 6 (lower is better)
Translates to: QREVIPLYSGRGTSS*QLSFLKASILLMSF
Trigger: AAAGCTCATCAACAAGATGCTGGCCTTTAAGAAGGACAACTGCAAGGAGCTGGTGCCCCTGCCCGAGTACAGCGGTATCACCTCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp TTCTGTTCCCCTAGCTGCCTCTTGGCCTCTGCCCATGTGGGCTCGTaGCCTCGAAGAATCATAACTGCCTGCATCACTATCTCCACTTGG +
Preference number: 6 (lower is better)
Translates to: FCSPSCLLASAHVGS*PRRIITACITISTW
Trigger: CCAAGTGGAGATAGTGATGCAGGCAGTTATGATTCTTCGAGGCAACGAGCCCACATGGGCAGAGGCCAAGAGGCAGCTAGGGGAACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS TCA 72 bp GGAACTTATTGTAGTCTTCATGCCAACAGGTGTTCTTaGCATCCAGGATACCCCCGCGAACGGCTCGCAGCG +
Preference number: 6 (lower is better)
Translates to: GTYCSLHANRCS*HPGYPRERLAA
Trigger: CGCTGCGAGCCGTTCGCGGGGGTATCCTGGATGTCAAGAACACCTGTTGGCATGAAGACTACAATAAGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS TCA 72 bp ACACTCTCCTTTCCAGTCCCAATACGGGGCAGGAAATaGGCACCAGCAAGGCAGGTCATGACTCTGTCGATG +
Preference number: 6 (lower is better)
Translates to: TLSFPVPIRGRK*APARQVMTLSM
Trigger: CATCGACAGAGTCATGACCTGCCTTGCTGGTGCTCATTTCCTGCCCCGTATTGGGACTGGAAAGGAGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
ENST00000575498.1
CDS TCA 72 bp TACCCGTTTGCCACTAATGCGTACCAGCAGCTTCTCTaGCATCTCTTGGGCTCGCCAGCCAATGGTCAGAGT +
Preference number: 6 (lower is better)
Translates to: YPFATNAYQQLL*HLLGSPANGQS
Trigger: ACTCTGACCATTGGCTGGCGAGCCCAAGAGATGTCAGAGAAGCTGCTGGTACGCATTAGTGGCAAACGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 72 bp GCCAGCATCTTGTTGATGAGCTTTTCGAACATGCGTTaGAGGGGCTCCACCTCAGCCTTTGGCCTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: ASILLMSFSNMR*RGSTSAFGLFS
Trigger: GGAGAAGAGGCCAAAGGCTGAGGTGGAGCCCCTTCAACGCATGTTCGAAAAGCTCATCAACAAGATGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp CATGTCCCAGGTCTTGAGGTAGTTCTGCAGCAGGCTTaGGTTGTTAGTCATGCCGCTGCTGATTTGGGTCTG +
Preference number: 6 (lower is better)
Translates to: HVPGLEVVLQQA*VVSHAAADLGL
Trigger: CAGACCCAAATCAGCAGCGGCATGACTAACAACGCAAGCCTGCTGCAGAACTACCTCAAGACCTGGGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS GCA 72 bp AGAGTCGCGAACTTGTTCTGCCATTCATTGCAGTGCTaGACCAGGGAGAACTTGAGGTGCGAACAGTCCAGC +
Preference number: 6 (lower is better)
Translates to: RVANLFCHSLQC*TRENLRCEQSS
Trigger: GCTGGACTGTTCGCACCTCAAGTTCTCCCTGGTGCAGCACTGCAATGAATGGCAGAACAAGTTCGCGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS GCA 72 bp AGCAGAGTCGCGAACTTGTTCTGCCATTCATTGCAGTaGTGCACCAGGGAGAACTTGAGGTGCGAACAGTCC +
Preference number: 6 (lower is better)
Translates to: SRVANLFCHSLQ*CTRENLRCEQS
Trigger: GGACTGTTCGCACCTCAAGTTCTCCCTGGTGCAGCACTGCAATGAATGGCAGAACAAGTTCGCGACTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS GCA 72 bp TTCCTCGGCCACTCAATCGCTGCTTCTTCTCAGCTTTaGTGGACATCGTGCAGGCAAAACCTGGGTCTATCG +
Preference number: 6 (lower is better)
Translates to: FLGHSIAASSQL*WTSCRQNLGLS
Trigger: CGATAGACCCAGGTTTTGCCTGCACGATGTCCAGCAAAGCTGAGAAGAAGCAGCGATTGAGTGGCCGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS CCA 72 bp CCCTTCAAGGCCCAGTGCAGTTTCTTGAGTCCCGGGTaGATCTTCTTATCCAGGAGCCGAATACGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: PFKAQCSFLSPG*IFLSRSRIRSL
Trigger: CAAAGAGCGTATTCGGCTCCTGGATAAGAAGATCCACCCGGGACTCAAGAAACTGCACTGGGCCTTGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 72 bp CTGTCCGATGACTCAGGCACCTGCTCCACCCGGGCCTaGTCTATGATATGCGACTGGATCTCTTCAAATTCA +
Preference number: 6 (lower is better)
Translates to: LSDDSGTCSTRA*SMICDWISSNS
Trigger: TGAATTTGAAGAGATCCAGTCGCATATCATAGACCAGGCCCGGGTGGAGCAGGTGCCTGAGTCATCGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 72 bp TCGATCTTGAACAAGCCTGTCCGCAGTTTATTGGCTTaGGCCAGCAGCTCCTGCCGTTTTTCTCCCAGCAAC +
Preference number: 6 (lower is better)
Translates to: SILNKPVRSLLA*ASSSCRFSPSN
Trigger: GTTGCTGGGAGAAAAACGGCAGGAGCTGCTGGCCCAAGCCAATAAACTGCGGACAGGCTTGTTCAAGATCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 72 bp CTCGGCCACTCAATCGCTGCTTCTTCTCAGCTTTGCTaGACATCGTGCAGGCAAAACCTGGGTCTATCGCTT +
Preference number: 6 (lower is better)
Translates to: LGHSIAASSQLC*TSCRQNLGLSL
Trigger: AAGCGATAGACCCAGGTTTTGCCTGCACGATGTCCAGCAAAGCTGAGAAGAAGCAGCGATTGAGTGGCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS CAA 72 bp GGGTGGATCTTCTTATCCAGGAGCCGAATACGCTCTTaGAATAGGGCCTGCTCATCTGGGGACAGCATGGCA +
Preference number: 6 (lower is better)
Translates to: GWIFLSRSRIRS*NRACSSGDSMA
Trigger: TGCCATGCTGTCCCCAGATGAGCAGGCCCTATTCAAAGAGCGTATTCGGCTCCTGGATAAGAAGATCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp TCCCTGAGCAGAGTCGCGAACTTGTTCTGCCATTCATaGCAGTGCTGCACCAGGGAGAACTTGAGGTGCGAA +
Preference number: 6 (lower is better)
Translates to: SLSRVANLFCHS*QCCTRENLRCE
Trigger: TTCGCACCTCAAGTTCTCCCTGGTGCAGCACTGCAATGAATGGCAGAACAAGTTCGCGACTCTGCTCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CAA 72 bp GCTATTTGGGTGTCCACAAAAATGAAGGACGTGGTCTaGAGCTCCACCCCAGCCTGGCGATACAGACGCTTG +
Preference number: 6 (lower is better)
Translates to: AIWVSTKMKDVV*SSTPAWRYRRL
Trigger: CAAGCGTCTGTATCGCCAGGCTGGGGTGGAGCTCAAGACCACGTCCTTCATTTTTGTGGACACCCAAATAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp TCCAGCTCCTTGAGCTTCCTTTTACCAGCCGCGATGTaGATGACCAGTGAGTCCTTCTGCTCCTCCAGCTCA +
Preference number: 6 (lower is better)
Translates to: SSSLSFLLPAAM*MTSESFCSSSS
Trigger: TGAGCTGGAGGAGCAGAAGGACTCACTGGTCATCAACATCGCGGCTGGTAAAAGGAAGCTCAAGGAGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 72 bp CTTCCTCGGCCACTCAATCGCTGCTTCTTCTCAGCTTaGCTGGACATCGTGCAGGCAAAACCTGGGTCTATC +
Preference number: 6 (lower is better)
Translates to: LPRPLNRCFFSA*LDIVQAKPGSI
Trigger: GATAGACCCAGGTTTTGCCTGCACGATGTCCAGCAAAGCTGAGAAGAAGCAGCGATTGAGTGGCCGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS CAA 90 bp TGGAAGAGTGGGTTTGGGCTGGTCTTTCCATCCCCGTTGATAGCCTaGGATAGTTCTAGCAGTGACCACTTCACATTCAGGCGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: WKSGFGLVFPSPLIA*DSSSSDHFTFRRRA
Trigger: TGCCCTGCGCCTGAATGTGAAGTGGTCACTGCTAGAACTATCCAAGGCTATCAACGGGGATGGAAAGACCAGCCCAAACCCACTCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp GAGGTGATACCGCTGTACTCGGGCAGGGGCACCAGCTCCTTGCAGTaGTCCTTCTTAAAGGCCAGCATCTTGTTGATGAGCTTTTCGAAC +
Preference number: 6 (lower is better)
Translates to: EVIPLYSGRGTSSLQ*SFLKASILLMSFSN
Trigger: GTTCGAAAAGCTCATCAACAAGATGCTGGCCTTTAAGAAGGACAACTGCAAGGAGCTGGTGCCCCTGCCCGAGTACAGCGGTATCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp ATGCGGATGATCTGGGACTTTGTGGGGAAGGTCATGTTGATAATGTaGAAGCGACTCCGTAGCCTTGGGGAGATGACAGTCCGTCCACCC +
Preference number: 6 (lower is better)
Translates to: MRMIWDFVGKVMLIM*KRLRSLGEMTVRPP
Trigger: GGGTGGACGGACTGTCATCTCCCCAAGGCTACGGAGTCGCTTCAACATTATCAACATGACCTTCCCCACAAAGTCCCAGATCATCCGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 72 bp CCCCCGCGAACGGCTCGCAGCGTGTGCAGATTTTTATaGAAGATGTCCTCAATCTCCAGCAAGTTCCGTGTT +
Preference number: 6 (lower is better)
Translates to: PPRTARSVCRFL*KMSSISSKFRV
Trigger: AACACGGAACTTGCTGGAGATTGAGGACATCTTTCATAAAAATCTGCACACGCTGCGAGCCGTTCGCGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS TCA 72 bp TGTTCCGTTCACGGTTCACCAGGGCCAGCTCGCTATTaGACAGCATGTAGAGATCCACCGCCTTCTTGTCAT +
Preference number: 6 (lower is better)
Translates to: CSVHGSPGPARY*TACRDPPPSCH
Trigger: ATGACAAGAAGGCGGTGGATCTCTACATGCTGTTCAATAGCGAGCTGGCCCTGGTGAACCGTGAACGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
ENST00000575498.1
CDS TCA 72 bp GGTGGATCTTCTTATCCAGGAGCCGAATACGCTCTTTaGATAGGGCCTGCTCATCTGGGGACAGCATGGCAA +
Preference number: 6 (lower is better)
Translates to: GGSSYPGAEYAL*IGPAHLGTAWQ
Trigger: TTGCCATGCTGTCCCCAGATGAGCAGGCCCTATTCAAAGAGCGTATTCGGCTCCTGGATAAGAAGATCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 72 bp CTTGGGCTCGCCAGCCAATGGTCAGAGTGGATGCCTTaGACTCATTCACAATCATCTGCACCTTGCTGGCAT +
Preference number: 6 (lower is better)
Translates to: LGLASQWSEWMP*THSQSSAPCWH
Trigger: ATGCCAGCAAGGTGCAGATGATTGTGAATGAGTTCAAGGCATCCACTCTGACCATTGGCTGGCGAGCCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 72 bp TCTGCCATTCATTGCAGTGCTGCACCAGGGAGAACTTaGGGTGCGAACAGTCCAGCAGCACAAACTGGATGT +
Preference number: 6 (lower is better)
Translates to: SAIHCSAAPGRT*GANSPAAQTGC
Trigger: ACATCCAGTTTGTGCTGCTGGACTGTTCGCACCTCAAGTTCTCCCTGGTGCAGCACTGCAATGAATGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS TCA 72 bp TCAAGAATGGCAAATTGCTCGTGTATGGGAGGGATCTaGGTCTCCACGTTGGCCAAGTCGTGCTTCAGGGCA +
Preference number: 6 (lower is better)
Translates to: SRMANCSCMGGI*VSTLAKSCFRA
Trigger: TGCCCTGAAGCACGACTTGGCCAACGTGGAGACTCAGATCCCTCCCATACACGAGCAATTTGCCATTCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS TCA 72 bp AGACACCCTTGGTTCGCTTCTCAACCCTGCTCTCAATaGTGCTCTGCACGTTATTGGATGTGGTCTGTGCGG +
Preference number: 6 (lower is better)
Translates to: RHPWFASQPCSQ*CSARYWMWSVR
Trigger: CCGCACAGACCACATCCAATAACGTGCAGAGCATCATTGAGAGCAGGGTTGAGAAGCGAACCAAGGGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 72 bp ATGACTCAGGCACCTGCTCCACCCGGGCCTGGTCTATaGTATGCGACTGGATCTCTTCAAATTCATCAGGCT +
Preference number: 6 (lower is better)
Translates to: MTQAPAPPGPGL*YATGSLQIHQA
Trigger: AGCCTGATGAATTTGAAGAGATCCAGTCGCATATCATAGACCAGGCCCGGGTGGAGCAGGTGCCTGAGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 72 bp GGTGCCAGTCACGAGGGTACTGCTCAAAGGAGTTCATaGGTCCGTGGAAGTTGGTCAGTTTGTCTAGCTCTG +
Preference number: 6 (lower is better)
Translates to: GASHEGTAQRSS*VRGSWSVCLAL
Trigger: CAGAGCTAGACAAACTGACCAACTTCCACGGACTCATGAACTCCTTTGAGCAGTACCCTCGTGACTGGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS GCA 72 bp AGTTGCCTCGAAGTTCTCCCAGGTGATGGGAACTGGTaGTTGGCGAATGAAGTAGACAAGCTGGTTCTGGGT +
Preference number: 6 (lower is better)
Translates to: SCLEVLPGDGNW*LANEVDKLVLG
Trigger: ACCCAGAACCAGCTTGTCTACTTCATTCGCCAAGCACCAGTTCCCATCACCTGGGAGAACTTCGAGGCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 72 bp CTTTATCACCATCTCAGGCTTCATGTTCATGGCCTCTaGAGGGATGTAGAGGACCGTGTGCCCCTCCAGTTT +
Preference number: 6 (lower is better)
Translates to: LYHHLRLHVHGL*RDVEDRVPLQF
Trigger: AAACTGGAGGGGCACACGGTCCTCTACATCCCTGCAGAGGCCATGAACATGAAGCCTGAGATGGTGATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 72 bp CATTCATTGCAGTGCTGCACCAGGGAGAACTTGAGGTaGGAACAGTCCAGCAGCACAAACTGGATGTTGGTG +
Preference number: 6 (lower is better)
Translates to: HSLQCCTRENLR*EQSSSTNWMLV
Trigger: CACCAACATCCAGTTTGTGCTGCTGGACTGTTCGCACCTCAAGTTCTCCCTGGTGCAGCACTGCAATGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS GCA 72 bp CCTGTCCGCAGTTTATTGGCTTGGGCCAGCAGCTCCTaGCGTTTTTCTCCCAGCAACTTCTTATATCCAGAC +
Preference number: 6 (lower is better)
Translates to: PVRSLLAWASSS*RFSPSNFLYPD
Trigger: GTCTGGATATAAGAAGTTGCTGGGAGAAAAACGGCAGGAGCTGCTGGCCCAAGCCAATAAACTGCGGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp GCATTGGTATACCACAGGTGCCAGTCACGAGGGTACTaGTCAAAGGAGTTCATGAGTCCGTGGAAGTTGGTC +
Preference number: 6 (lower is better)
Translates to: ALVYHRCQSRGY*SKEFMSPWKLV
Trigger: GACCAACTTCCACGGACTCATGAACTCCTTTGAGCAGTACCCTCGTGACTGGCACCTGTGGTATACCAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS GCA 72 bp CGTGACAACAGAGAATGCAGCCTTGCAGGTCCTCCTTaGTGGAAGAGACATATCCCTCAAAGATCCGGTCCA +
Preference number: 6 (lower is better)
Translates to: RDNRECSLAGPP*WKRHIPQRSGP
Trigger: TGGACCGGATCTTTGAGGGATATGTCTCTTCCAGCAAGGAGGACCTGCAAGGCTGCATTCTCTGTTGTCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS GCA 72 bp CAGTTCTCCTCCCAGTCTCGTGCGATCTCCCAGATTTaGTGGAGGGCATCGAGCTCCTTTGAATTCGAAATC +
Preference number: 6 (lower is better)
Translates to: QFSSQSRAISQI*WRASSSFEFEI
Trigger: GATTTCGAATTCAAAGGAGCTCGATGCCCTCCAGCAAATCTGGGAGATCGCACGAGACTGGGAGGAGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS CCA 72 bp CACAGTTGCCTCGAAGTTCTCCCAGGTGATGGGAACTaGTGCTTGGCGAATGAAGTAGACAAGCTGGTTCTG +
Preference number: 6 (lower is better)
Translates to: HSCLEVLPGDGN*CLANEVDKLVL
Trigger: CAGAACCAGCTTGTCTACTTCATTCGCCAAGCACCAGTTCCCATCACCTGGGAGAACTTCGAGGCAACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 72 bp CTTTGTCCTTTATCACCATCTCAGGCTTCATGTTCATaGCCTCTGCAGGGATGTAGAGGACCGTGTGCCCCT +
Preference number: 6 (lower is better)
Translates to: LCPLSPSQASCS*PLQGCRGPCAP
Trigger: AGGGGCACACGGTCCTCTACATCCCTGCAGAGGCCATGAACATGAAGCCTGAGATGGTGATAAAGGACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 72 bp TGGATCCAGAGCCGTGTGATGCTGGACTTGGTATCATaGAAGTCCTTGTTGGCTCTAAGCATGCCCTGGAAC +
Preference number: 6 (lower is better)
Translates to: WIQSRVMLDLVS*KSLLALSMPWN
Trigger: GTTCCAGGGCATGCTTAGAGCCAACAAGGACTTCCATGATACCAAGTCCAGCATCACACGGCTCTGGATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 72 bp AAAATGAAGGACGTGGTCTTGAGCTCCACCCCAGCCTaGCGATACAGACGCTTGATATCATCTCGGAACTCC +
Preference number: 6 (lower is better)
Translates to: KMKDVVLSSTPA*RYRRLISSRNS
Trigger: GGAGTTCCGAGATGATATCAAGCGTCTGTATCGCCAGGCTGGGGTGGAGCTCAAGACCACGTCCTTCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 72 bp GTTATCCCAGTAGGCATCTGCAAGCCAGCTACTACATaGATTGTCCATTTGGCCCTCCCGATCCAAGACCAC +
Preference number: 6 (lower is better)
Translates to: VIPVGICKPATT*IVHLALPIQDH
Trigger: GTGGTCTTGGATCGGGAGGGCCAAATGGACAATCCATGTAGTAGCTGGCTTGCAGATGCCTACTGGGATAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 72 bp AGCTGCTTACTGATGCCAGACAGGTCCATGCATCGGTaGCGCCAGAACTCAATCTCCTCCAGAGGACCTAAA +
Preference number: 6 (lower is better)
Translates to: SCLLMPDRSMHR*RQNSISSRGPK
Trigger: TTTAGGTCCTCTGGAGGAGATTGAGTTCTGGCGCAACCGATGCATGGACCTGTCTGGCATCAGTAAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CAA 72 bp TCTTGGGCTCGCCAGCCAATGGTCAGAGTGGATGCCTaGAACTCATTCACAATCATCTGCACCTTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: SWARQPMVRVDA*NSFTIICTLLA
Trigger: TGCCAGCAAGGTGCAGATGATTGTGAATGAGTTCAAGGCATCCACTCTGACCATTGGCTGGCGAGCCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp TTCTGCCATTCATTGCAGTGCTGCACCAGGGAGAACTaGAGGTGCGAACAGTCCAGCAGCACAAACTGGATG +
Preference number: 6 (lower is better)
Translates to: FCHSLQCCTREN*RCEQSSSTNWM
Trigger: CATCCAGTTTGTGCTGCTGGACTGTTCGCACCTCAAGTTCTCCCTGGTGCAGCACTGCAATGAATGGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CAA 72 bp AGCCGTGTGATGCTGGACTTGGTATCATGGAAGTCCTaGTTGGCTCTAAGCATGCCCTGGAACACCTTGGAG +
Preference number: 6 (lower is better)
Translates to: SRVMLDLVSWKS*LALSMPWNTLE
Trigger: CTCCAAGGTGTTCCAGGGCATGCTTAGAGCCAACAAGGACTTCCATGATACCAAGTCCAGCATCACACGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp GGTCTGGCCTCCAGCCCTGGTGGGTGTAATCTGAGGTaGCAAGGAAAGCAAAGTATCAAAGAGGGTTTGTGC +
Preference number: 6 (lower is better)
Translates to: GLASSPGGCNLR*QGKQSIKEGLC
Trigger: GCACAAACCCTCTTTGATACTTTGCTTTCCTTGCAACCTCAGATTACACCCACCAGGGCTGGAGGCCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 90 bp GCGAACTTGTTCTGCCATTCATTGCAGTGCTGCACCAGGGAGAACTaGAGGTGCGAACAGTCCAGCAGCACAAACTGGATGTTGGTGACT +
Preference number: 6 (lower is better)
Translates to: ANLFCHSLQCCTREN*RCEQSSSTNWMLVT
Trigger: AGTCACCAACATCCAGTTTGTGCTGCTGGACTGTTCGCACCTCAAGTTCTCCCTGGTGCAGCACTGCAATGAATGGCAGAACAAGTTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CAA 90 bp GACACTGTCCTCGACTGGCACCTCGTACTTTTCAAGAATGGCAAATaGCTCGTGTATGGGAGGGATCTGAGTCTCCACGTTGGCCAAGTC +
Preference number: 6 (lower is better)
Translates to: DTVLDWHLVLFKNGK*LVYGRDLSLHVGQV
Trigger: GACTTGGCCAACGTGGAGACTCAGATCCCTCCCATACACGAGCAATTTGCCATTCTTGAAAAGTACGAGGTGCCAGTCGAGGACAGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CAA 90 bp ATCCAGAGCCGTGTGATGCTGGACTTGGTATCATGGAAGTCCTTGTaGGCTCTAAGCATGCCCTGGAACACCTTGGAGATGTCTCGAAGG +
Preference number: 6 (lower is better)
Translates to: IQSRVMLDLVSWKSL*ALSMPWNTLEMSRR
Trigger: CCTTCGAGACATCTCCAAGGTGTTCCAGGGCATGCTTAGAGCCAACAAGGACTTCCATGATACCAAGTCCAGCATCACACGGCTCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp TGGATCCAGAGCCGTGTGATGCTGGACTTGGTATCATGGAAGTCCTaGTTGGCTCTAAGCATGCCCTGGAACACCTTGGAGATGTCTCGA +
Preference number: 6 (lower is better)
Translates to: WIQSRVMLDLVSWKS*LALSMPWNTLEMSR
Trigger: TCGAGACATCTCCAAGGTGTTCCAGGGCATGCTTAGAGCCAACAAGGACTTCCATGATACCAAGTCCAGCATCACACGGCTCTGGATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp AGCTCCAACGACATCACTTGCACCTTTTCCCTAGTTTCGTCGATCTaGAACAAGCCTGTCCGCAGTTTATTGGCTTGGGCCAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SSNDITCTFSLVSSI*NKPVRSLLAWASSS
Trigger: GGAGCTGCTGGCCCAAGCCAATAAACTGCGGACAGGCTTGTTCAAGATCGACGAAACTAGGGAAAAGGTGCAAGTGATGTCGTTGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp CTCAGCCACCTTCTTCTTGGCATCCTCCAGCTCCAACGACATCACTaGCACCTTTTCCCTAGTTTCGTCGATCTTGAACAAGCCTGTCCG +
Preference number: 6 (lower is better)
Translates to: LSHLLLGILQLQRHH*HLFPSFVDLEQACP
Trigger: CGGACAGGCTTGTTCAAGATCGACGAAACTAGGGAAAAGGTGCAAGTGATGTCGTTGGAGCTGGAGGATGCCAAGAAGAAGGTGGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp TGGCTGATTCGCAGCAATGGGGTATCCAACCGCCGAATGCAATCCTaGTCCAGACTTGATGTCCACTCTTGGAAGGTTTTTCGAACCAGC +
Preference number: 6 (lower is better)
Translates to: WLIRSNGVSNRRMQS*SRLDVHSWKVFRTS
Trigger: GCTGGTTCGAAAAACCTTCCAAGAGTGGACATCAAGTCTGGACAAGGATTGCATTCGGCGGTTGGATACCCCATTGCTGCGAATCAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
ENST00000575498.1
CDS CAA 90 bp TTGAGTCCCGGGTGGATCTTCTTATCCAGGAGCCGAATACGCTCTTaGAATAGGGCCTGCTCATCTGGGGACAGCATGGCAATAATCCTA +
Preference number: 6 (lower is better)
Translates to: LSPGWIFLSRSRIRS*NRACSSGDSMAIIL
Trigger: TAGGATTATTGCCATGCTGTCCCCAGATGAGCAGGCCCTATTCAAAGAGCGTATTCGGCTCCTGGATAAGAAGATCCACCCGGGACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp TCTGACATCTCTTGGGCTCGCCAGCCAATGGTCAGAGTGGATGCCTaGAACTCATTCACAATCATCTGCACCTTGCTGGCATGTATACGG +
Preference number: 6 (lower is better)
Translates to: SDISWARQPMVRVDA*NSFTIICTLLACIR
Trigger: CCGTATACATGCCAGCAAGGTGCAGATGATTGTGAATGAGTTCAAGGCATCCACTCTGACCATTGGCTGGCGAGCCCAAGAGATGTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp AGGGAGAACTTGAGGTGCGAACAGTCCAGCAGCACAAACTGGATGTaGGTGACTGTCTCCTCCTTCTGCACGTTATTAGCAACTTCCGTG +
Preference number: 6 (lower is better)
Translates to: RENLRCEQSSSTNWM*VTVSSFCTLLATSV
Trigger: CACGGAAGTTGCTAATAACGTGCAGAAGGAGGAGACAGTCACCAACATCCAGTTTGTGCTGCTGGACTGTTCGCACCTCAAGTTCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CAA 90 bp TTTTCCCTAGTTTCGTCGATCTTGAACAAGCCTGTCCGCAGTTTATaGGCTTGGGCCAGCAGCTCCTGCCGTTTTTCTCCCAGCAACTTC +
Preference number: 6 (lower is better)
Translates to: FSLVSSILNKPVRSL*AWASSSCRFSPSNF
Trigger: GAAGTTGCTGGGAGAAAAACGGCAGGAGCTGCTGGCCCAAGCCAATAAACTGCGGACAGGCTTGTTCAAGATCGACGAAACTAGGGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 72 bp CTAAATTTTCTCCTGTCTCCACAGTCTCCTGGGCACTaGGCATCTCCTTTATCTGCCGGGTCCAGTGGATCA +
Preference number: 6 (lower is better)
Translates to: LNFLLSPQSPGH*ASPLSAGSSGS
Trigger: TGATCCACTGGACCCGGCAGATAAAGGAGATGCTCAGTGCCCAGGAGACTGTGGAGACAGGAGAAAATTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS TCA 72 bp CAGAGATGGTGGAAAAGAGGTGGTTGCCAATGTCATTaGCCACACCTGCCAAAGTCTGCAGAGTGGGTGAGA +
Preference number: 6 (lower is better)
Translates to: QRWWKRGGCQCH*PHLPKSAEWVR
Trigger: TCTCACCCACTCTGCAGACTTTGGCAGGTGTGGTCAATGACATTGGCAACCACCTCTTTTCCACCATCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 72 bp CTGTTTGGATGGGTTCACGATGTAACTTGCGCTTGGTaGGAATGTCAGGGAGGTGGCAGAAGACAGAGATGG +
Preference number: 6 (lower is better)
Translates to: LFGWVHDVTCAW*ECQGGGRRQRW
Trigger: CCATCTCTGTCTTCTGCCACCTCCCTGACATTCTCACCAAGCGCAAGTTACATCGTGAACCCATCCAAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 72 bp ATTCCTTGTAAGAAGCGAGGCTGCCATCCTTGGGGATaGAATAAGTCTCCAGTGCTGACAACCGGTGGAAGG +
Preference number: 6 (lower is better)
Translates to: IPCKKRGCHPWG*NKSPVLTTGGR
Trigger: CCTTCCACCGGTTGTCAGCACTGGAGACTTATTTCATCCCCAAGGATGGCAGCCTCGCTTCTTACAAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS TCA 72 bp AGGAAAGCAAAGTATCAAAGAGGGTTTGTGCCTCAGTaGTCTGAGAGGCCACATCAGCATTGGGGTGCTGGC +
Preference number: 6 (lower is better)
Translates to: RKAKYQRGFVPQ*SERPHQHWGAG
Trigger: GCCAGCACCCCAATGCTGATGTGGCCTCTCAGATCACTGAGGCACAAACCCTCTTTGATACTTTGCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS GCA 72 bp ATGGATTCAACGTGCTTCACTCCCTTCTTCACCAGCTaGTTACTGATGCCAGACAGGTCCATGCATCGGTTG +
Preference number: 6 (lower is better)
Translates to: MDSTCFTPFFTS*LLMPDRSMHRL
Trigger: CAACCGATGCATGGACCTGTCTGGCATCAGTAAGCAGCTGGTGAAGAAGGGAGTGAAGCACGTTGAATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 72 bp ATGGTCACCACATCCTGGTGCAGGTTCATCAATTTCTaGTGTACAGCTGCCCGATGCTCTCTTTGGTCCTCT +
Preference number: 6 (lower is better)
Translates to: MVTTSWCRFINF*CTAARCSLWSS
Trigger: AGAGGACCAAAGAGAGCATCGGGCAGCTGTACAGCAGAAATTGATGAACCTGCACCAGGATGTGGTGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp TGGTTGCCAATGTCATTGACCACACCTGCCAAAGTCTaGAGAGTGGGTGAGAATTCCACCTGTGCCACACTT +
Preference number: 6 (lower is better)
Translates to: WLPMSLTTPAKV*RVGENSTCATL
Trigger: AAGTGTGGCACAGGTGGAATTCTCACCCACTCTGCAGACTTTGGCAGGTGTGGTCAATGACATTGGCAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp GTGATGTGTTCAATAGCCTCTCGGAAGAGCACTAGCTaGATGGGCACGACAGAGGGTGACAGGTTATACTCA +
Preference number: 6 (lower is better)
Translates to: VMCSIASRKSTS*MGTTEGDRLYS
Trigger: TGAGTATAACCTGTCACCCTCTGTCGTGCCCATGCAGCTAGTGCTCTTCCGAGAGGCTATTGAACACATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp AGACAGCGTAGGTGTGGTAGTCATTCAGGTAGTCAATaGGGTCCTCCAGCTTATTGCTGCGGTGGCTTTTGT +
Preference number: 6 (lower is better)
Translates to: RQRRCGSHSGSQ*GPPAYCCGGFC
Trigger: ACAAAAGCCACCGCAGCAATAAGCTGGAGGACCGCATTGACTACCTGAATGACTACCACACCTACGCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 72 bp AGCAGGCTTGCGTTGTTAGTCATGCCGCTGCTGATTTaGGTCTGGATCTTCTTGATGTCCTCATCTTGCTCC +
Preference number: 6 (lower is better)
Translates to: SRLALLVMPLLI*VWIFLMSSSCS
Trigger: GGAGCAAGATGAGGACATCAAGAAGATCCAGACCCAAATCAGCAGCGGCATGACTAACAACGCAAGCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 72 bp GAGAACTTGAGGTGCGAACAGTCCAGCAGCACAAACTaGATGTTGGTGACTGTCTCCTCCTTCTGCACGTTA +
Preference number: 6 (lower is better)
Translates to: ENLRCEQSSSTN*MLVTVSSFCTL
Trigger: TAACGTGCAGAAGGAGGAGACAGTCACCAACATCCAGTTTGTGCTGCTGGACTGTTCGCACCTCAAGTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CCA 72 bp GTCATCCATAAAGGTGATCATGCTTTTGCCCCCGAATaGCACGTAGACACCCTTGGTTCGCTTCTCAACCCT +
Preference number: 6 (lower is better)
Translates to: VIHKGDHAFAPE*HVDTLGSLLNP
Trigger: AGGGTTGAGAAGCGAACCAAGGGTGTCTACGTGCCATTCGGGGGCAAAAGCATGATCACCTTTATGGATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 72 bp TTCTCCTCCCAGTCTCGTGCGATCTCCCAGATTTGCTaGAGGGCATCGAGCTCCTTTGAATTCGAAATCTTC +
Preference number: 6 (lower is better)
Translates to: FSSQSRAISQIC*RASSSFEFEIF
Trigger: GAAGATTTCGAATTCAAAGGAGCTCGATGCCCTCCAGCAAATCTGGGAGATCGCACGAGACTGGGAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS CAA 72 bp TGGAAGAGTGGGTTTGGGCTGGTCTTTCCATCCCCGTaGATAGCCTTGGATAGTTCTAGCAGTGACCACTTC +
Preference number: 6 (lower is better)
Translates to: WKSGFGLVFPSP*IALDSSSSDHF
Trigger: GAAGTGGTCACTGCTAGAACTATCCAAGGCTATCAACGGGGATGGAAAGACCAGCCCAAACCCACTCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp CAGCAGGCTTGCGTTGTTAGTCATGCCGCTGCTGATTaGGGTCTGGATCTTCTTGATGTCCTCATCTTGCTC +
Preference number: 6 (lower is better)
Translates to: QQACVVSHAAAD*GLDLLDVLILL
Trigger: GAGCAAGATGAGGACATCAAGAAGATCCAGACCCAAATCAGCAGCGGCATGACTAACAACGCAAGCCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp ATGCGGATGATCTGGGACTTTGTGGGGAAGGTCATGTaGATAATGTTGAAGCGACTCCGTAGCCTTGGGGAG +
Preference number: 6 (lower is better)
Translates to: MRMIWDFVGKVM*IMLKRLRSLGE
Trigger: CTCCCCAAGGCTACGGAGTCGCTTCAACATTATCAACATGACCTTCCCCACAAAGTCCCAGATCATCCGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp CCAACTCCTGGTAAGGTTCCTTCAGGATTGACAAAAAGGTCAGGTTaGACTGTGCTTGACGAGAGCCATCCTGGATCTGCTGTGCCAGTT +
Preference number: 6 (lower is better)
Translates to: PTPGKVPSGLTKRSG*TVLDESHPGSAVPV
Trigger: AACTGGCACAGCAGATCCAGGATGGCTCTCGTCAAGCACAGTCAAACCTGACCTTTTTGTCAATCCTGAAGGAACCTTACCAGGAGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CAA 90 bp GCAGCAATGGGGTATCCAACCGCCGAATGCAATCCTTGTCCAGACTaGATGTCCACTCTTGGAAGGTTTTTCGAACCAGCTCATCAATGG +
Preference number: 6 (lower is better)
Translates to: AAMGYPTAECNPCPD*MSTLGRFFEPAHQW
Trigger: CCATTGATGAGCTGGTTCGAAAAACCTTCCAAGAGTGGACATCAAGTCTGGACAAGGATTGCATTCGGCGGTTGGATACCCCATTGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
ENST00000575498.1
CDS CAA 90 bp TGCTCTCTTTGGTCCTCTTCAAATTCCAGGTCCCTGTATACCCGTTaGCCACTAATGCGTACCAGCAGCTTCTCTGACATCTCTTGGGCT +
Preference number: 6 (lower is better)
Translates to: CSLWSSSNSRSLYTR*PLMRTSSFSDISWA
Trigger: AGCCCAAGAGATGTCAGAGAAGCTGCTGGTACGCATTAGTGGCAAACGGGTATACAGGGACCTGGAATTTGAAGAGGACCAAAGAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp GTGCAGGTTCATCAATTTCTGCTGTACAGCTGCCCGATGCTCTCTTaGGTCCTCTTCAAATTCCAGGTCCCTGTATACCCGTTTGCCACT +
Preference number: 6 (lower is better)
Translates to: VQVHQFLLYSCPMLS*VLFKFQVPVYPFAT
Trigger: AGTGGCAAACGGGTATACAGGGACCTGGAATTTGAAGAGGACCAAAGAGAGCATCGGGCAGCTGTACAGCAGAAATTGATGAACCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp GTAGTTCTGCAGCAGGCTTGCGTTGTTAGTCATGCCGCTGCTGATTaGGGTCTGGATCTTCTTGATGTCCTCATCTTGCTCCACAACTGT +
Preference number: 6 (lower is better)
Translates to: VVLQQACVVSHAAAD*GLDLLDVLILLHNC
Trigger: ACAGTTGTGGAGCAAGATGAGGACATCAAGAAGATCCAGACCCAAATCAGCAGCGGCATGACTAACAACGCAAGCCTGCTGCAGAACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp CTCCTTGTGTTTCTTCAGCATTTGCTTACTGTCCAGCAGAGTTTGTaGGAAGACAACCCACTCCCCGTTGAGACTGTCCAGCATCTCCAG +
Preference number: 6 (lower is better)
Translates to: LLVFLQHLLTVQQSL*EDNPLPVETVQHLQ
Trigger: CTGGAGATGCTGGACAGTCTCAACGGGGAGTGGGTTGTCTTCCAACAAACTCTGCTGGACAGTAAGCAAATGCTGAAGAAACACAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CAA 90 bp GACTCATCAGCTATTTGGGTGTCCACAAAAATGAAGGACGTGGTCTaGAGCTCCACCCCAGCCTGGCGATACAGACGCTTGATATCATCT +
Preference number: 6 (lower is better)
Translates to: DSSAIWVSTKMKDVV*SSTPAWRYRRLISS
Trigger: AGATGATATCAAGCGTCTGTATCGCCAGGCTGGGGTGGAGCTCAAGACCACGTCCTTCATTTTTGTGGACACCCAAATAGCTGATGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp CCTAGTTTCGTCGATCTTGAACAAGCCTGTCCGCAGTTTATTGGCTaGGGCCAGCAGCTCCTGCCGTTTTTCTCCCAGCAACTTCTTATA +
Preference number: 6 (lower is better)
Translates to: PSFVDLEQACPQFIG*GQQLLPFFSQQLLI
Trigger: TATAAGAAGTTGCTGGGAGAAAAACGGCAGGAGCTGCTGGCCCAAGCCAATAAACTGCGGACAGGCTTGTTCAAGATCGACGAAACTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp CTGTACGTAGTGATCTTTCCAAGCGTGACAACAGAGAATGCAGCCTaGCAGGTCCTCCTTGCTGGAAGAGACATATCCCTCAAAGATCCG +
Preference number: 6 (lower is better)
Translates to: LYVVIFPSVTTENAA*QVLLAGRDISLKDP
Trigger: CGGATCTTTGAGGGATATGTCTCTTCCAGCAAGGAGGACCTGCAAGGCTGCATTCTCTGTTGTCACGCTTGGAAAGATCACTACGTACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570791.5
CDS TCA 72 bp GGTATCCAACCGCCGAATGCAATCCTTGTCCAGACTTaGTGTCCACTCTTGGAAGGTTTTTCGAACCAGCTC +
Preference number: 6 (lower is better)
Translates to: GIQPPNAILVQT*CPLLEGFSNQL
Trigger: GAGCTGGTTCGAAAAACCTTCCAAGAGTGGACATCAAGTCTGGACAAGGATTGCATTCGGCGGTTGGATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
ENST00000575498.1
CDS TCA 72 bp TATCATCTCGGAACTCCTGCTTCCGATAATGTTTGGTaGCCTCGATCTGGAAGGTGGTGTAGTCGCAGATGG +
Preference number: 6 (lower is better)
Translates to: YHLGTPASDNVW*PRSGRWCSRRW
Trigger: CCATCTGCGACTACACCACCTTCCAGATCGAGGTCACCAAACATTATCGGAAGCAGGAGTTCCGAGATGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 72 bp AGGGAGTTGATAGAGACTGGTCACAGAAATAATCATTaGTGTAGGTGGTCAGCAGGCGCCGGTCCCAGTCAT +
Preference number: 6 (lower is better)
Translates to: RELIETGHRNNH*CRWSAGAGPSH
Trigger: ATGACTGGGACCGGCGCCTGCTGACCACCTACATCAATGATTATTTCTGTGACCAGTCTCTATCAACTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS GCA 72 bp TGCAGGTTCATCAATTTCTGCTGTACAGCTGCCCGATaGTCTCTTTGGTCCTCTTCAAATTCCAGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: CRFINFCCTAAR*SLWSSSNSRSL
Trigger: CAGGGACCTGGAATTTGAAGAGGACCAAAGAGAGCATCGGGCAGCTGTACAGCAGAAATTGATGAACCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp TTGGTTCGCTTCTCAACCCTGCTCTCAATGATGCTCTaGACGTTATTGGATGTGGTCTGTGCGGACATGTTG +
Preference number: 6 (lower is better)
Translates to: LVRFSTLLSMML*TLLDVVCADML
Trigger: CAACATGTCCGCACAGACCACATCCAATAACGTGCAGAGCATCATTGAGAGCAGGGTTGAGAAGCGAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp GGAAATTGGTATTATATTCCACCTCCTTATCGCCAATaGGCATCAACAGCCGACCACCGATTCGGGCTACAG +
Preference number: 6 (lower is better)
Translates to: GNWYYIPPPYRQ*ASTADHRFGLQ
Trigger: CTGTAGCCCGAATCGGTGGTCGGCTGTTGATGCGCATTGGCGATAAGGAGGTGGAATATAATACCAATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS GCA 72 bp TCCACCATAGTTGATGCCGGCAATGAGGTACTTAAGTaGGTCCCAAGGTGTCTCCTCGTACTCATCGAGATA +
Preference number: 6 (lower is better)
Translates to: STIVDAGNEVLK*VPRCLLVLIEI
Trigger: TATCTCGATGAGTACGAGGAGACACCTTGGGACGCACTTAAGTACCTCATTGCCGGCATCAACTATGGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 72 bp TCCACTCTTGGAAGGTTTTTCGAACCAGCTCATCAATaGCCTGGACCATCTGCTGATAGGTGTGCACACTCT +
Preference number: 6 (lower is better)
Translates to: STLGRFFEPAHQ*PGPSADRCAHS
Trigger: AGAGTGTGCACACCTATCAGCAGATGGTCCAGGCCATTGATGAGCTGGTTCGAAAAACCTTCCAAGAGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
ENST00000575498.1
CDS CCA 72 bp CACTGTCCTCGACTGGCACCTCGTACTTTTCAAGAATaGCAAATTGCTCGTGTATGGGAGGGATCTGAGTCT +
Preference number: 6 (lower is better)
Translates to: HCPRLAPRTFQE*QIARVWEGSES
Trigger: AGACTCAGATCCCTCCCATACACGAGCAATTTGCCATTCTTGAAAAGTACGAGGTGCCAGTCGAGGACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CCA 72 bp TTCTTCAGCATTTGCTTACTGTCCAGCAGAGTTTGTTaGAAGACAACCCACTCCCCGTTGAGACTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: FFSICLLSSRVC*KTTHSPLRLSS
Trigger: GCTGGACAGTCTCAACGGGGAGTGGGTTGTCTTCCAACAAACTCTGCTGGACAGTAAGCAAATGCTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CCA 72 bp GCACGTTCTGAAGTAGCACCGGGTATCCAAAGTGAATaGCGTGTTCTAGGATTCGCAGGTAATCGCTCATCT +
Preference number: 6 (lower is better)
Translates to: ARSEVAPGIQSE*RVLGFAGNRSS
Trigger: AGATGAGCGATTACCTGCGAATCCTAGAACACGCCATTCACTTTGGATACCCGGTGCTACTTCAGAACGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 72 bp GTGGTTCTGACATCAGTTGGTAAAGACGTGTCATGTTaGCCTTTAGGCCCTTTGGTGGCTCTGTGGTCATCT +
Preference number: 6 (lower is better)
Translates to: VVLTSVGKDVSC*PLGPLVALWSS
Trigger: AGATGACCACAGAGCCACCAAAGGGCCTAAAGGCCAACATGACACGTCTTTACCAACTGATGTCAGAACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CCA 72 bp ATCTCTTCCAGGCTTGTAGACATGACGATGAGACCCTaGATGCCTTTCTCTAGGTCTGTCAGTGAGAACAGG +
Preference number: 6 (lower is better)
Translates to: ISSRLVDMTMRP*MPFSRSVSENR
Trigger: CCTGTTCTCACTGACAGACCTAGAGAAAGGCATCCAGGGTCTCATCGTCATGTCTACAAGCCTGGAAGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp CAGATGATGCGGATGAGACTGATCAGCTTAGGGAGCTaGCTAGAGATGTCCTTGGGCTTCATGAAAGCCAAC +
Preference number: 6 (lower is better)
Translates to: QMMRMRLISLGS*LEMSLGFMKAN
Trigger: GTTGGCTTTCATGAAGCCCAAGGACATCTCTAGCAAGCTCCCTAAGCTGATCAGTCTCATCCGCATCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CAA 72 bp GGGTATCCAACCGCCGAATGCAATCCTTGTCCAGACTaGATGTCCACTCTTGGAAGGTTTTTCGAACCAGCT +
Preference number: 6 (lower is better)
Translates to: GYPTAECNPCPD*MSTLGRFFEPA
Trigger: AGCTGGTTCGAAAAACCTTCCAAGAGTGGACATCAAGTCTGGACAAGGATTGCATTCGGCGGTTGGATACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
ENST00000575498.1
CDS CAA 72 bp CGCAGCAATGGGGTATCCAACCGCCGAATGCAATCCTaGTCCAGACTTGATGTCCACTCTTGGAAGGTTTTT +
Preference number: 6 (lower is better)
Translates to: RSNGVSNRRMQS*SRLDVHSWKVF
Trigger: AAAAACCTTCCAAGAGTGGACATCAAGTCTGGACAAGGATTGCATTCGGCGGTTGGATACCCCATTGCTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
ENST00000575498.1
CDS CAA 72 bp TGGTCCTCTTCAAATTCCAGGTCCCTGTATACCCGTTaGCCACTAATGCGTACCAGCAGCTTCTCTGACATC +
Preference number: 6 (lower is better)
Translates to: WSSSNSRSLYTR*PLMRTSSFSDI
Trigger: GATGTCAGAGAAGCTGCTGGTACGCATTAGTGGCAAACGGGTATACAGGGACCTGGAATTTGAAGAGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp CATCAATTTCTGCTGTACAGCTGCCCGATGCTCTCTTaGGTCCTCTTCAAATTCCAGGTCCCTGTATACCCG +
Preference number: 6 (lower is better)
Translates to: HQFLLYSCPMLS*VLFKFQVPVYP
Trigger: CGGGTATACAGGGACCTGGAATTTGAAGAGGACCAAAGAGAGCATCGGGCAGCTGTACAGCAGAAATTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp TTGAGGTGCGAACAGTCCAGCAGCACAAACTGGATGTaGGTGACTGTCTCCTCCTTCTGCACGTTATTAGCA +
Preference number: 6 (lower is better)
Translates to: LRCEQSSSTNWM*VTVSSFCTLLA
Trigger: TGCTAATAACGTGCAGAAGGAGGAGACAGTCACCAACATCCAGTTTGTGCTGCTGGACTGTTCGCACCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CAA 72 bp GACATCACTTGCACCTTTTCCCTAGTTTCGTCGATCTaGAACAAGCCTGTCCGCAGTTTATTGGCTTGGGCC +
Preference number: 6 (lower is better)
Translates to: DITCTFSLVSSI*NKPVRSLLAWA
Trigger: GGCCCAAGCCAATAAACTGCGGACAGGCTTGTTCAAGATCGACGAAACTAGGGAAAAGGTGCAAGTGATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp TCCCGATCCAAGACCACACCCCCACGTAGAAAGAAGTaGTATTCATCCATGTTGAGCTTGCCAGAAGTCTCC +
Preference number: 6 (lower is better)
Translates to: SRSKTTPPRRKK*YSSMLSLPEVS
Trigger: GGAGACTTCTGGCAAGCTCAACATGGATGAATACAACTTCTTTCTACGTGGGGGTGTGGTCTTGGATCGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 72 bp TTGGCCTTTAGGCCCTTTGGTGGCTCTGTGGTCATCTaGATGCTGACCTGCAAGATTGAGATAGGGAAGTCT +
Preference number: 6 (lower is better)
Translates to: LAFRPFGGSVVI*MLTCKIEIGKS
Trigger: AGACTTCCCTATCTCAATCTTGCAGGTCAGCATCAAGATGACCACAGAGCCACCAAAGGGCCTAAAGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 90 bp CTGTGCCACACTTCCTTGCAGATCATTCTTCAAAATGACAAGGACTaGGAAGAGTGGGTTTGGGCTGGTCTTTCCATCCCCGTTGATAGC +
Preference number: 6 (lower is better)
Translates to: LCHTSLQIILQNDKD*EEWVWAGLSIPVDS
Trigger: GCTATCAACGGGGATGGAAAGACCAGCCCAAACCCACTCTTCCAAGTCCTTGTCATTTTGAAGAATGATCTGCAAGGAAGTGTGGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp AAGACTCTGAAACATTCATGGATCCAGAGCCGTGTGATGCTGGACTaGGTATCATGGAAGTCCTTGTTGGCTCTAAGCATGCCCTGGAAC +
Preference number: 6 (lower is better)
Translates to: KTLKHSWIQSRVMLD*VSWKSLLALSMPWN
Trigger: GTTCCAGGGCATGCTTAGAGCCAACAAGGACTTCCATGATACCAAGTCCAGCATCACACGGCTCTGGATCCATGAATGTTTCAGAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp TATGCCTTTCCCCAGAGCGGAGGAACATGGGCATCAAAGATGCAATaGAAAATCTCTTCCAGGCTTGTAGACATGACGATGAGACCCTGG +
Preference number: 6 (lower is better)
Translates to: YAFPQSGGTWASKMQ*KISSRLVDMTMRPW
Trigger: CCAGGGTCTCATCGTCATGTCTACAAGCCTGGAAGAGATTTTCAATTGCATCTTTGATGCCCATGTTCCTCCGCTCTGGGGAAAGGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 72 bp TGTCTCCGCAGTTCCAACAGCATCTTCTGGGAATACTaGGCTACTGACCAGTGCATAGTGACAAAGATCTGG +
Preference number: 6 (lower is better)
Translates to: CLRSSNSIFWEY*ATDQCIVTKIW
Trigger: CCAGATCTTTGTCACTATGCACTGGTCAGTAGCTCAGTATTCCCAGAAGATGCTGTTGGAACTGCGGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp AAAATGATTTCTAATGCTCTCAGGCCAGCCTGTGTTTaGAAAGATCTGAGGGGCAAAGACTCCACCGAGCAG +
Preference number: 6 (lower is better)
Translates to: KMISNALRPACV*KDLRGKDSTEQ
Trigger: CTGCTCGGTGGAGTCTTTGCCCCTCAGATCTTTGCAAACACAGGCTGGCCTGAGAGCATTAGAAATCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS GCA 72 bp TTATCCAGGAGCCGAATACGCTCTTTGAATAGGGCCTaGTCATCTGGGGACAGCATGGCAATAATCCTATTG +
Preference number: 6 (lower is better)
Translates to: LSRSRIRSLNRA*SSGDSMAIILL
Trigger: CAATAGGATTATTGCCATGCTGTCCCCAGATGAGCAGGCCCTATTCAAAGAGCGTATTCGGCTCCTGGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 72 bp TCAATGAAGATGGTGAGGATGGATTCTGTAGGGTCCTaGGCAAAGTGTTCCAGAATGGCATCATGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: SMKMVRMDSVGS*AKCSRMASCSC
Trigger: ACAGGAGCATGATGCCATTCTGGAACACTTTGCCCAGGACCCTACAGAATCCATCCTCACCATCTTCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CCA 72 bp CGAATGCAATCCTTGTCCAGACTTGATGTCCACTCTTaGAAGGTTTTTCGAACCAGCTCATCAATGGCCTGG +
Preference number: 6 (lower is better)
Translates to: RMQSLSRLDVHS*KVFRTSSSMAW
Trigger: CCAGGCCATTGATGAGCTGGTTCGAAAAACCTTCCAAGAGTGGACATCAAGTCTGGACAAGGATTGCATTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
ENST00000575498.1
CDS CCA 72 bp ATCAATTTCTGCTGTACAGCTGCCCGATGCTCTCTTTaGTCCTCTTCAAATTCCAGGTCCCTGTATACCCGT +
Preference number: 6 (lower is better)
Translates to: INFCCTAARCSL*SSSNSRSLYTR
Trigger: ACGGGTATACAGGGACCTGGAATTTGAAGAGGACCAAAGAGAGCATCGGGCAGCTGTACAGCAGAAATTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 72 bp AATCATAACTGCCTGCATCACTATCTCCACTTGGGCTaGGGGCCGTCCATAAGACTTGATCTCTCCTATATC +
Preference number: 6 (lower is better)
Translates to: NHNCLHHYLHLG*GPSIRLDLSYI
Trigger: GATATAGGAGAGATCAAGTCTTATGGACGGCCCCCAGCCCAAGTGGAGATAGTGATGCAGGCAGTTATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 72 bp GGTAAGGTTCCTTCAGGATTGACAAAAAGGTCAGGTTaGACTGTGCTTGACGAGAGCCATCCTGGATCTGCT +
Preference number: 6 (lower is better)
Translates to: GKVPSGLTKRSG*TVLDESHPGSA
Trigger: AGCAGATCCAGGATGGCTCTCGTCAAGCACAGTCAAACCTGACCTTTTTGTCAATCCTGAAGGAACCTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000570791.5
ENST00000572933.5
CDS CAA 72 bp ATTTCCGCAAAGAGAATCAGAAGGGACTTGTCAAAGTaGACATCCAGCATGCCCGCCTTCTCCTGGCTGATT +
Preference number: 6 (lower is better)
Translates to: ISAKRIRRDLSK*TSSMPAFSWLI
Trigger: AATCAGCCAGGAGAAGGCGGGCATGCTGGATGTCAACTTTGACAAGTCCCTTCTGATTCTCTTTGCGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp TTTCTTCAGCATTTGCTTACTGTCCAGCAGAGTTTGTaGGAAGACAACCCACTCCCCGTTGAGACTGTCCAG +
Preference number: 6 (lower is better)
Translates to: FLQHLLTVQQSL*EDNPLPVETVQ
Trigger: CTGGACAGTCTCAACGGGGAGTGGGTTGTCTTCCAACAAACTCTGCTGGACAGTAAGCAAATGCTGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CAA 72 bp GTGTTTCTTCAGCATTTGCTTACTGTCCAGCAGAGTTaGTTGGAAGACAACCCACTCCCCGTTGAGACTGTC +
Preference number: 6 (lower is better)
Translates to: VFLQHLLTVQQS*LEDNPLPVETV
Trigger: GACAGTCTCAACGGGGAGTGGGTTGTCTTCCAACAAACTCTGCTGGACAGTAAGCAAATGCTGAAGAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CAA 72 bp GGGTACTGCTCAAAGGAGTTCATGAGTCCGTGGAAGTaGGTCAGTTTGTCTAGCTCTGTGATGTTATCCCAG +
Preference number: 6 (lower is better)
Translates to: GYCSKEFMSPWK*VSLSSSVMLSQ
Trigger: CTGGGATAACATCACAGAGCTAGACAAACTGACCAACTTCCACGGACTCATGAACTCCTTTGAGCAGTACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 72 bp TCTGTCAGTGAGAACAGGATGGTCTGCATCAGTGTGTaGTATCTCTGGATCTCCTGCAGAAGGACCACATTG +
Preference number: 6 (lower is better)
Translates to: SVSENRMVCISV*YLWISCRRTTL
Trigger: CAATGTGGTCCTTCTGCAGGAGATCCAGAGATACAACACACTGATGCAGACCATCCTGTTCTCACTGACAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 72 bp CCCCAGAGCGGAGGAACATGGGCATCAAAGATGCAATaGAAAATCTCTTCCAGGCTTGTAGACATGACGATG +
Preference number: 6 (lower is better)
Translates to: PQSGGTWASKMQ*KISSRLVDMTM
Trigger: CATCGTCATGTCTACAAGCCTGGAAGAGATTTTCAATTGCATCTTTGATGCCCATGTTCCTCCGCTCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp TTTCTCCTTGTGTTTCTTCAGCATTTGCTTACTGTCCAGCAGAGTTaGTTGGAAGACAACCCACTCCCCGTTGAGACTGTCCAGCATCTC +
Preference number: 6 (lower is better)
Translates to: FLLVFLQHLLTVQQS*LEDNPLPVETVQHL
Trigger: GAGATGCTGGACAGTCTCAACGGGGAGTGGGTTGTCTTCCAACAAACTCTGCTGGACAGTAAGCAAATGCTGAAGAAACACAAGGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CAA 90 bp ATTTGGCCCTCCCGATCCAAGACCACACCCCCACGTAGAAAGAAGTaGTATTCATCCATGTTGAGCTTGCCAGAAGTCTCCAAGATTTTG +
Preference number: 6 (lower is better)
Translates to: IWPSRSKTTPPRRKK*YSSMLSLPEVSKIL
Trigger: CAAAATCTTGGAGACTTCTGGCAAGCTCAACATGGATGAATACAACTTCTTTCTACGTGGGGGTGTGGTCTTGGATCGGGAGGGCCAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS GCA 72 bp TTCTTCTTGGCATCCTCCAGCTCCAACGACATCACTTaGACCTTTTCCCTAGTTTCGTCGATCTTGAACAAG +
Preference number: 6 (lower is better)
Translates to: FFLASSSSNDIT*TFSLVSSILNK
Trigger: CTTGTTCAAGATCGACGAAACTAGGGAAAAGGTGCAAGTGATGTCGTTGGAGCTGGAGGATGCCAAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp ATTGTCAGCCAGTGCCTGACACTTGATTTCCTCAACTaGAATCTTTTCACTGTTGGCTGTTACGGCCTTCTG +
Preference number: 6 (lower is better)
Translates to: IVSQCLTLDFLN*NLFTVGCYGLL
Trigger: CAGAAGGCCGTAACAGCCAACAGTGAAAAGATTGCAGTTGAGGAAATCAAGTGTCAGGCACTGGCTGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CCA 72 bp TCACGAGGGTACTGCTCAAAGGAGTTCATGAGTCCGTaGAAGTTGGTCAGTTTGTCTAGCTCTGTGATGTTA +
Preference number: 6 (lower is better)
Translates to: SRGYCSKEFMSP*KLVSLSSSVML
Trigger: TAACATCACAGAGCTAGACAAACTGACCAACTTCCACGGACTCATGAACTCCTTTGAGCAGTACCCTCGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 72 bp AAACATTCATGGATCCAGAGCCGTGTGATGCTGGACTaGGTATCATGGAAGTCCTTGTTGGCTCTAAGCATG +
Preference number: 6 (lower is better)
Translates to: KHSWIQSRVMLD*VSWKSLLALSM
Trigger: CATGCTTAGAGCCAACAAGGACTTCCATGATACCAAGTCCAGCATCACACGGCTCTGGATCCATGAATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp TGTGCTTTCTTCTTGAAGTCATCTGCCGAGTGGATCAGGCCTGTCTaGAATTTCTCCTTGTGTTTCTTCAGCATTTGCTTACTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: CAFFLKSSAEWIRPV*NFSLCFFSICLLSS
Trigger: GCTGGACAGTAAGCAAATGCTGAAGAAACACAAGGAGAAATTCAAGACAGGCCTGATCCACTCGGCAGATGACTTCAAGAAGAAAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CAA 72 bp ACACCCCCACGTAGAAAGAAGTTGTATTCATCCATGTaGAGCTTGCCAGAAGTCTCCAAGATTTTGGCACAC +
Preference number: 6 (lower is better)
Translates to: TPPRRKKLYSSM*SLPEVSKILAH
Trigger: GTGTGCCAAAATCTTGGAGACTTCTGGCAAGCTCAACATGGATGAATACAACTTCTTTCTACGTGGGGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 72 bp CAGAGTGAAAACAGCAGCTTCTTATATTTGGCAGGTTaGGAGCAGCGGGAAAACTGTGGTTCTGACATCAGT +
Preference number: 6 (lower is better)
Translates to: QSENSSFLYLAG*EQRENCGSDIS
Trigger: ACTGATGTCAGAACCACAGTTTTCCCGCTGCTCCAAACCTGCCAAATATAAGAAGCTGCTGTTTTCACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 90 bp TGGCCTTTGAATTCGAAATCTTCCAGAAGTGTATGTGCTTTCTTCTaGAAGTCATCTGCCGAGTGGATCAGGCCTGTCTTGAATTTCTCC +
Preference number: 6 (lower is better)
Translates to: WPLNSKSSRSVCAFF*KSSAEWIRPVLNFS
Trigger: GGAGAAATTCAAGACAGGCCTGATCCACTCGGCAGATGACTTCAAGAAGAAAGCACATACACTTCTGGAAGATTTCGAATTCAAAGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp AACACAGAGTGGAAGAAACAGAGTGAAAACAGCAGCTTCTTATATTaGGCAGGTTTGGAGCAGCGGGAAAACTGTGGTTCTGACATCAGT +
Preference number: 6 (lower is better)
Translates to: NTEWKKQSENSSFLY*AGLEQRENCGSDIS
Trigger: ACTGATGTCAGAACCACAGTTTTCCCGCTGCTCCAAACCTGCCAAATATAAGAAGCTGCTGTTTTCACTCTGTTTCTTCCACTCTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 90 bp GCTCCTTTGAATTCGAAATCTTCCAGAAGTGTATGTGCTTTCTTCTaGAAGTCATCTGCCGAGTGGATCAGGCCTGTCTTGAATTTCTCC +
Preference number: 6 (lower is better)
Translates to: APLNSKSSRSVCAFF*KSSAEWIRPVLNFS
Trigger: GGAGAAATTCAAGACAGGCCTGATCCACTCGGCAGATGACTTCAAGAAGAAAGCACATACACTTCTGGAAGATTTCGAATTCAAAGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS TCA 72 bp TCTTCTAGATCTTTCTGGGCATTGTCAGCCAGTGCCTaGCACTTGATTTCCTCAACTGCAATCTTTTCACTG +
Preference number: 6 (lower is better)
Translates to: SSRSFWALSASA*HLISSTAIFSL
Trigger: CAGTGAAAAGATTGCAGTTGAGGAAATCAAGTGTCAGGCACTGGCTGACAATGCCCAGAAAGATCTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS TCA 72 bp TCCCCACAGGCTGCCACAGGCATTGATCTCAGGTTATaGATTTCAAACTTGAAGGATTTGTACTTTGCTCCA +
Preference number: 6 (lower is better)
Translates to: SPQAATGIDLRL*ISNLKDLYFAP
Trigger: TGGAGCAAAGTACAAATCCTTCAAGTTTGAAATTCATAACCTGAGATCAATGCCTGTGGCAGCCTGTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572933.5
CDS GCA 72 bp TTCCAGAAGTGTATGTGCTTTCTTCTTGAAGTCATCTaGCGAGTGGATCAGGCCTGTCTTGAATTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: FQKCMCFLLEVI*RVDQACLEFLL
Trigger: AAGGAGAAATTCAAGACAGGCCTGATCCACTCGGCAGATGACTTCAAGAAGAAAGCACATACACTTCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000574518.1
CDS CCA 72 bp AGAGTGAAAACAGCAGCTTCTTATATTTGGCAGGTTTaGAGCAGCGGGAAAACTGTGGTTCTGACATCAGTT +
Preference number: 6 (lower is better)
Translates to: RVKTAASYIWQV*SSGKTVVLTSV
Trigger: AACTGATGTCAGAACCACAGTTTTCCCGCTGCTCCAAACCTGCCAAATATAAGAAGCTGCTGTTTTCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 72 bp TGTGTAATCTGGTCTAAGGCAGACATGTATCCCACGTaGCTGGTGAAATGGCCTTTGAATTCGAAATCTTCC +
Preference number: 6 (lower is better)
Translates to: CVIWSKADMYPT*LVKWPLNSKSS
Trigger: GGAAGATTTCGAATTCAAAGGCCATTTCACCAGCAACGTGGGATACATGTCTGCCTTAGACCAGATTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 72 bp GGGAGCTTGTCCTCAAATGATGTCCAACTCCGTATTTaGGGGTCCACAAAATACTCATATACCGTGTCCTTA +
Preference number: 6 (lower is better)
Translates to: GSLSSNDVQLRI*GSTKYSYTVSL
Trigger: TAAGGACACGGTATATGAGTATTTTGTGGACCCCAAAATACGGAGTTGGACATCATTTGAGGACAAGCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS CAA 90 bp CAACTCTTAGGGAGCTTGTCCTCAAATGATGTCCAACTCCGTATTTaGGGGTCCACAAAATACTCATATACCGTGTCCTTATTGGGAAAG +
Preference number: 6 (lower is better)
Translates to: QLLGSLSSNDVQLRI*GSTKYSYTVSLLGK
Trigger: CTTTCCCAATAAGGACACGGTATATGAGTATTTTGTGGACCCCAAAATACGGAGTTGGACATCATTTGAGGACAAGCTCCCTAAGAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp ATGGCCTTTGAATTCGAAATCTTCCAGAAGTGTATGTaGTTTCTTCTTGAAGTCATCTGCCGAGTGGATCAG +
Preference number: 6 (lower is better)
Translates to: MAFEFEIFQKCM*FLLEVICRVDQ
Trigger: CTGATCCACTCGGCAGATGACTTCAAGAAGAAAGCACATACACTTCTGGAAGATTTCGAATTCAAAGGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389173.6
ENST00000572933.5
CDS GCA 72 bp AGCTCCTTTGAATTCGAAATCTTCCAGAAGTGTATGTaGTTTCTTCTTGAAGTCATCTGCCGAGTGGATCAG +
Preference number: 6 (lower is better)
Translates to: SSFEFEIFQKCM*FLLEVICRVDQ
Trigger: CTGATCCACTCGGCAGATGACTTCAAGAAGAAAGCACATACACTTCTGGAAGATTTCGAATTCAAAGGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574518.1
CDS CAA 72 bp TCTGAGATATTGTCTTTATCAAAGTTGATCAGTGACTaGATGAAGTTCTGTTCCCCTAGCTGCCTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: SEILSLSKLISD*MKFCSPSCLLA
Trigger: GGCCAAGAGGCAGCTAGGGGAACAGAACTTCATCAAGTCACTGATCAACTTTGATAAAGACAATATCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS TCA 72 bp AGCTTGCCAGAAGTCTCCAAGATTTTGGCACACATATaGAAACTGAATAGTAGTTTGTGGCGTTCGAAAAGG +
Preference number: 6 (lower is better)
Translates to: SLPEVSKILAHI*KLNSSLWRSKR
Trigger: CCTTTTCGAACGCCACAAACTACTATTCAGTTTTCATATGTGTGCCAAAATCTTGGAGACTTCTGGCAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS CAA 90 bp CCAATCTTCTTCAGAACCTTATCTGAGATATTGTCTTTATCAAAGTaGATCAGTGACTTGATGAAGTTCTGTTCCCCTAGCTGCCTCTTG +
Preference number: 6 (lower is better)
Translates to: PIFFRTLSEILSLSK*ISDLMKFCSPSCLL
Trigger: CAAGAGGCAGCTAGGGGAACAGAACTTCATCAAGTCACTGATCAACTTTGATAAAGACAATATCTCAGATAAGGTTCTGAAGAAGATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389173.6
ENST00000572933.5
ENST00000575105.1
CDS GCA 72 bp CAGGTTATGAATTTCAAACTTGAAGGATTTGTACTTTaGTCCAAGGAAAAACGTTCTGTTAGGCCAGCAAAT +
Preference number: 6 (lower is better)
Translates to: QVMNFKLEGFVL*SKEKRSVRPAN
Trigger: ATTTGCTGGCCTAACAGAACGTTTTTCCTTGGAGCAAAGTACAAATCCTTCAAGTTTGAAATTCATAACCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572933.5