RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAH17 (Homo sapiens)

Ensembl gene IDs: ENSG00000187775

Ensembl transcript IDs: ENST00000389840.7, ENST00000586052.5, ENST00000586850.1, ENST00000587177.1, ENST00000589793.1, ENST00000590227.5, ENST00000591369.5, ENST00000591647.1, ENST00000592152.1, ENST00000592192.2

Found 1097 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGCACAGGTGAAGGGCTaGGTTGTGGTCCAGCCCCAG +
Preference number: 2 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSAQVKG*VVVQPQ
Trigger: CTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGC...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
3UTR-3UTR TCA 90 bp GTTAAAGGTCCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACAGCCGCGCTTCAGCGATaGCTCCAGTCTGGGTGTCCC +
Preference number: 2 (lower is better)
Translates to: VKGPDIGGAADACFVHGTAALQR*LQSGCP
Trigger: GGGACACCCAGACTGGAGTCATCGCTGAAGCGCGGC...TGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGGACCTTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
3UTR-3UTR CCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCAGCCCCAGGGAGTGTaGGCTGTGAGGCAGGAGCGA +
Preference number: 2 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPQPQGV*AVRQER
Trigger: TCGCTCCTGCCTCACAGCCCACACTCCCTGGGGCTG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
3UTR-3UTR TCA 90 bp CAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTTCACAGGTGCACAGGTaGAGGGCTGAGTTGTGGTCC +
Preference number: 2 (lower is better)
Translates to: QRHGCQDPLRCLLFGLQVSQVHR*RAELWS
Trigger: GGACCACAACTCAGCCCTTCACCTGTGCACCTGTGA...AACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
3UTR-3UTR CCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACAGCCCCAGGGAGTGTaGGCTGTGAGGCAGGAGCGA +
Preference number: 2 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERQPQGV*AVRQER
Trigger: TCGCTCCTGCCTCACAGCCCACACTCCCTGGGGCTG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
3UTR-3UTR TCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATCACAGGTGCACAGGTaGAGGGCTGAGTTGTGGTCC +
Preference number: 2 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERSQVHR*RAELWS
Trigger: GGACCACAACTCAGCCCTTCACCTGTGCACCTGTGA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
3UTR-3UTR GCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATAGAATAAGTCACAGGTaGACAGGTGAAGGGCTGAGT +
Preference number: 2 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYRISHR*TGEGLS
Trigger: ACTCAGCCCTTCACCTGTGCACCTGTGACTTATTCT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
3UTR TCA 72 bp CCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTaGAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGT +
Preference number: 3 (lower is better)
Translates to: PVPVKNKSQVHR*RAELWSSPREC
Trigger: ACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTATTCTTTACAGGAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
3UTR TCA 72 bp ACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTaGTTATTTAAGAGAACGAAAAACCACCACCAGTTC +
Preference number: 3 (lower is better)
Translates to: TLWFRCAWLQST*LFKRTKNHHQF
Trigger: GAACTGGTGGTGGTTTTTCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCGCCCGCATGAGCACCTaGTCCTCTGCCCGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGARMST*SSARLG
Trigger: CCCCAGCCGGGCAGAGGACCAGGTGCTCATGCGGGC...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCACGCGGGACACTCCCGTaGCTGCCCCCGAGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEARGTLP*LPPSPS
Trigger: AGACGGACTCGGGGGCAGGCACGGGAGTGTCCCGCG...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCAGCGATGCCGGAGCTaGGCCTGCCAGGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGQRCRS*ACQVKA
Trigger: GGCCTTCACCTGGCAGGCCCAGCTCCGGCATCGCTG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAGGTCCTCTGCCCGGCTaGGGTCGCCCCTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAGPLPG*GRPSSG
Trigger: CCCTGAAGAGGGGCGACCCCAGCCGGGCAGAGGACC...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTCGCCTCCTCCAGTGCCTaGCTCTTGGGCGCCACGTCG +
Preference number: 4 (lower is better)
Translates to: TGMAGVSSFSRASAMTPVASSSA*LLGATS
Trigger: CGACGTGGCGCCCAAGAGGCAGGCACTGGAGGAGGC...GACTGGAGTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGCCGCCAGGCCCATCATaGAGGGGTAGGCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVPPGPS*RGRPGP
Trigger: TGGCCCGGGCCTACCCCTCCATGATGGGCCTGGCGG...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCAGCCAGGCTGTTGGTaGCGTGGTTGCTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGQPGCW*RGCSGA
Trigger: GGCACCTGAGCAACCACGTCACCAACAGCCTGGCTG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCACCAGGAAGCGGGCGCTaGCGGACACCAGCGCATCTT +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAPGSGR*RTPAHL
Trigger: AAGATGCGCTGGTGTCCGTCAGCGCCCGCTTCCTGG...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCCATGGACTCCAGCGTaGCATCCAGGCTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGPWTPA*HPGCPG
Trigger: ACCTGGGCAGCCTGGATGGCACGCTGGAGTCCATGG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCAGGCTCCATTTGAGCTaGCCGGCCACGGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGRLHLS*PATGGM
Trigger: CATGCCTCCCGTGGCCGGGCAGCTCAAATGGAGCCT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCAGCCAGGTAGGTCCTaGACAGCCGACGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGQPGRS*TADGPS
Trigger: ACTGGGACCGTCGGCTGTGCAGGACCTACCTGGCTG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp TGGGCTGTGAGGCAGGAGCGAGCTAAACCTGTAGGAGCAGCGCCACGGCTGCCACAGCCAGGTAGGTCCTaGACAGCCGACGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: WAVRQERAKPVGAAPRLPQPGRS*TADGPS
Trigger: ACTGGGACCGTCGGCTGTGCAGGACCTACCTGGCTG...TGGCAGCCGTGGCGCTGCTCCTACAGGTTTAGCTCGCTCCTGCCTCACAGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp TGGGCTGTGAGGCAGGAGCGAGCTAAACCTGTAGGAGCAGCGCCACGGCTGCCAGGACACTCCCGTGCCTaGCCCCGAGTCCGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: WAVRQERAKPVGAAPRLPGHSRA*PRVRLF
Trigger: AAAGAGACGGACTCGGGGGCAGGCACGGGAGTGTCC...TGGCAGCCGTGGCGCTGCTCCTACAGGTTTAGCTCGCTCCTGCCTCACAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAGAGCAGCGCCACGGCTaGCAGGATCCACTTCGCTGC +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAEQRHG*QDPLRC
Trigger: GCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTGCTC...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCGGAACTGAGCCAGGGTaGGCGGTGTCTTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGGTEPG*AVSWGW
Trigger: CCATCCCCAAGACACCGCCCACCCTGGCTCAGTTCC...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCAGCTCCAGCATGACTaGATACCTGGGCGCCACCTC +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGQLQHD*IPGRHL
Trigger: GAGGTGGCGCCCAGGTATTCAGTCATGCTGGAGCTG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGCCAGGAAGCGGGCGCTaGCGGACACCAGCGCATCTT +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVPGSGR*RTPAHL
Trigger: AAGATGCGCTGGTGTCCGTCAGCGCCCGCTTCCTGG...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCCACCTTGCCCATCATaGTCTTGGCCGCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGPPCPS*SWPPSS
Trigger: GCTGGAAGGCGGCCAAGATCATGATGGGCAAGGTGG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp TGGGCTGTGAGGCAGGAGCGAGCTAAACCTGTAGGAGCAGCGCCACGGCTGCCATGCCTTGGTAGGGCTTaGAGGCCTTCAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: WAVRQERAKPVGAAPRLPCLGRA*RPSGRP
Trigger: AGGCCTGCCTGAAGGCCTTCAAGCCCTACCAAGGCA...TGGCAGCCGTGGCGCTGCTCCTACAGGTTTAGCTCGCTCCTGCCTCACAGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp ACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTCTCTCCGAGAGGGCCTTaGTCCCGCCCCAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: TGMAGVSSFSRASAMTPVSPRGP*SRPSLD
Trigger: ATCAAGGCTGGGGCGGGATCAAGGCCCTCTCGGAGA...GACTGGAGTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGCCGCGCTTCAGCGATaGCTCCAGTCTGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVAALQR*LQSGCP
Trigger: GGGACACCCAGACTGGAGTCATCGCTGAAGCGCGGC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCGGTCAGCTTGGCCTCTaGTCCAGACATGACCGGGTG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGGQLGL*SRHDRV
Trigger: CACCCGGTCATGTCTGGAGCAGAGGCCAAGCTGACC...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGTGCTGAGCAGGGCCTaGTTGAAGGGGCGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVVLSRA*LKGRQS
Trigger: CGACTGCCGCCCCTTCAAGCAGGCCCTGCTCAGCAC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAGTGGCCTGCATGAGCTaGTGCCAGTGGCGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAVACMS*CQWRSR
Trigger: TCGGGAACGCCACTGGCAGCAGCTCATGCAGGCCAC...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGCCATCAGCACCGACTTaGCCGTCCCCGCGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVPSAPT*PSPRSP
Trigger: TGGGGAACGCGGGGACGGGCAAGTCGGTGCTGATGG...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTTCTCCAGCACCCCCTaGAGCATGGCTGAGGTCGTG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGFSSTP*SMAEVV
Trigger: CACGACCTCAGCCATGCTGCAGGGGGTGCTGGAGAA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTCGAAGTAGAGCAGAGATaGCCTCTCCGCAGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: TGMAGVSSFSRASAMTPVEVEQR*PLRSRA
Trigger: CGCCCGGCTGCGGAGAGGGCATCTCTGCTCTACTTC...GACTGGAGTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGCCTGGGCGCCGAACTTaGGCCTCTCTGCCACCACAG +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVPGRRT*ASLPPQ
Trigger: CTGTGGTGGCAGAGAGGCGCAAGTTCGGCGCCCAGG...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCAGGTGGGGCCGCGGATaGGTGTTTTGTACACGGGAC +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGRWGRG*VFCTRD
Trigger: GTCCCGTGTACAAAACACGCATCCGCGGCCCCACCT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGCCCCAGGTTAAAGTaGCAGTCCTGGTCCACGCCC +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGCPRLK*QSWSTP
Trigger: GGGCGTGGACCAGGACTGCCACTTTAACCTGGGGCA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAATGTCGTCAAAGCGCTaGGAGTCCCCCGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAMSSKR*ESPGSW
Trigger: CCAGCTCCCGGGGGACTCCCAGCGCTTTGACGACAT...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCAGAGGCCGGGTTTGCTaGTGGCTTCCACCACGTTGG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGRGRVC*WLPPRW
Trigger: CCAACGTGGTGGAAGCCACCAGCAAACCCGGCCTCT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCGAACACCAGCCTCATaGTGCGGTTCAGGGGGATCC +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGRTPAS*CGSGGS
Trigger: GGATCCCCCTGAACCGCACCATGAGGCTGGTGTTCG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGTGGTGAGGGCCTCCTaGCCGGGGAAGCTCACAGCA +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVVVRAS*PGKLTA
Trigger: TGCTGTGAGCTTCCCCGGCCAGGAGGCCCTCACCAC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCCTGGTTGTTCCAGGTaGCCACGTCCGCGTCATCTG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGPGCSR*PRPRHL
Trigger: CAGATGACGCGGACGTGGCCACCTGGAACAACCAGG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGATCTGCTCCTGGAACTaGGCCAGGGTGGGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVICSWN*ARVGGV
Trigger: GACACCGCCCACCCTGGCTCAGTTCCAGGAGCAGAT...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCCTCCCCGTAGGTCTTaGGCAGCTCGATGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGPPRRS*AARWFA
Trigger: AGCAAACCATCGAGCTGCTCAAGACCTACGGGGAGG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGCCCGGTGGCAGGCCTTaGGCTGCTTGTAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVPGGRP*AACSLG
Trigger: TCCCAGACTACAAGCAGCTCAAGGCCTGCCACCGGG...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGCCTCCGCCTGCAGCTTaGGCTCCACGATGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVPPPAA*APRCSA
Trigger: AGCAGAGCATCGTGGAGCTCAAGCTGCAGGCGGAGG...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATGGACTTGGAGCGGATaGACTCGGGGTCGAACGTCG +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAWTWSG*TRGRTS
Trigger: CGACGTTCGACCCCGAGTTCATCCGCTCCAAGTCCA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCGCCGATGTTCTCAATaGGCAAGGTGTCCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGRRCSQ*ARCPLP
Trigger: CGGAAGGGGACACCTTGCTCATTGAGAACATCGGCG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCAAGCTGTCCTCCGCCTaGAGCTTGAGCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGKLSSA*SLSSTM
Trigger: CATCGTGGAGCTCAAGCTGCAGGCGGAGGACAGCTT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCAGCAGCTCCTCCAGCTaGACCACCTTCAGCACGAAG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGSSSSS*TTFSTK
Trigger: CTTCGTGCTGAAGGTGGTGCAGCTGGAGGAGCTGCT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAGCCTCTCGATCCAGCTaGTCACCACCGGGTTCCATC +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAASRSS*SPPGSI
Trigger: GATGGAACCCGGTGGTGAGCAGCTGGATCGAGAGGC...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGCCTCCTCCAGTGCCTaGCTCTTGGGCGCCACGTCG +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSASSSA*LLGATS
Trigger: CGACGTGGCGCCCAAGAGGCAGGCACTGGAGGAGGC...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CATGAAGAGTCCGTACACGTAGGAGCCCTCTCGCGGAGGAGCGGTCATGTCCTCCATTCTCGGTGGACATaGGGTCGCTGGGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: HEESVHVGALSRRSGHVLHSRWT*GRWGGP
Trigger: AGGGCCTCCCCAGCGACCGCATGTCCACCGAGAATG...GAGGACATGACCGCTCCTCCGCGAGAGGGCTCCTACGTGTACGGACTCTTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCCAGTGTCCTTTCTCTaGAGCCACGTCCAGGGCGTT +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGPVSFL*SHVQGV
Trigger: AACGCCCTGGACGTGGCTGCAGAGAAAGGACACTGG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCACTGCAGCCAGCCGTaGAACACCTTGGTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGHCSQP*NTLVFS
Trigger: CGAGAACACCAAGGTGTTCCACGGCTGGCTGCAGTG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCACTCGTTGGCCTGGAGTaGTGCCACGGTCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEALVGLE*CHGQLH
Trigger: GTGAAGCTGACCGTGGCACCACTCCAGGCCAACGAG...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGCTGACCTCGTTGGCCTaGAGTGGTGCCACGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVLTSLA*SGATVS
Trigger: GCTGACCGTGGCACCACTCCAGGCCAACGAGGTCAG...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCGGGTTTGCTGGTaGCTTCCACCACGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVGRVCW*LPPRWV
Trigger: CACCCAACGTGGTGGAAGCCACCAGCAAACCCGGCC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTGTGTCCAGAGCCTCCTaGGCTGCCAGCAGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: QRHGCQDPLRCLLFGLQVVSRAS*AASRAG
Trigger: ACCGGCCCTGCTGGCAGCCCAGGAGGCTCTGGACAC...AACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTTGATTCCTTGGAGCTaGGCGTCCACGATCAGCGGC +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGLIPWS*ASTISG
Trigger: GCCGCTGATCGTGGACGCCCAGCTCCAAGGAATCAA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCCTCGTTGGCAGGGGTaGTCCTCTGGATGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGPRWQG*SSGWLS
Trigger: AGAAAGCCATCCAGAGGACCACCCCTGCCAACGAGG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp GAAGATGACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACCGTCCCAGGGCACCTTaGGGTTGGCCTCCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: EDDRHGRGQLFQPRFSDDRPRAP*GWPPGS
Trigger: ACTACCTGGAGGCCAACCCCAAGGTGCCCTGGGACG...GTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGTCATCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp CCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACTCATAGATCCGCCAGGCCCATCATaGAGGGGTAGGCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: PDIGGAADACFVHGTLIDPPGPS*RGRPGP
Trigger: TGGCCCGGGCCTACCCCTCCATGATGGGCCTGGCGG...ATCTATGAGTGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCAGGTCCAGACATAGGTaGGGCCGCGGATGCGTGTTT +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGRSRHR*GRGCVF
Trigger: AAACACGCATCCGCGGCCCCACCTATGTCTGGACCT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp GCAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTCAGCCCCAGGGAGTGTaGGCTGTGAGGCAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: AAPRLPGSTSLPSLWSSSQPQGV*AVRQER
Trigger: TCGCTCCTGCCTCACAGCCCACACTCCCTGGGGCTG...ACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCCAGATACTCTAGTCTaGCGTCCGGGGCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGPDTLV*RPGPLS
Trigger: TGACAATGGCCCCGGACGTCAGACTAGAGTATCTGG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGCAGCAGCGCCTGGGCTaGGTCTTTGCTCAGCACATC +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVQQRLG*VFAQHI
Trigger: GATGTGCTGAGCAAAGACTCAGCCCAGGCGCTGCTG...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGCATAGTCCCCCTCCTTaGGGGGCTTGGTCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVHSPPP*GAWSSP
Trigger: TGGGCTTGACCAAGCCCCTCAAGGAGGGGGACTATG...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCACGGCACGCAGGGACGTaGTCACGTTTTTCACGGTGT +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEARHAGT*SRFSRC
Trigger: ACACCGTGAAAAACGTGATCACGTCCCTGCGTGCCG...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGCACCTCGCTGGACTTaGGCATCATGGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVAPRWT*ASWCLS
Trigger: GGACAGGCACCATGATGCTCAAGTCCAGCGAGGTGC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTGCCAGGTGAAGGCCTaGGAACTCTCCACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVCQVKA*ELSTLA
Trigger: GGCCAAGGTGGAGAGTTCTCAGGCCTTCACCTGGCA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCACCGTCCTCAGGTGGCTaGTTTCGAACACCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAPSSGG*FRTPAS
Trigger: TGAGGCTGGTGTTCGAAATCAGCCACCTGAGGACGG...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCGTCGCATGGAGGAGATaGTGTTCTCCACCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGVAWRR*CSPPRP
Trigger: AGGACGAGGTGGAGAACATCATCTCCTCCATGCGAC...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTGGACTTGGAGCGGATaGACTCGGGGTCGAACGTCG +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVWTWSG*TRGRTS
Trigger: CGACGTTCGACCCCGAGTTCATCCGCTCCAAGTCCA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTTGATGAGGGTGCACTaGGCCTGCATCTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGLMRVH*ACISGL
Trigger: CAAGCCAGAGATGCAGGCTCAGTGCACCCTCATCAA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATCTCGTCCGTCAGGTTaGTCACCCGCTGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEASRPSG*SPAASP
Trigger: AGGTGAAGCAGCGGGTGATCAACCTGACGGACGAGA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp GAAGATGACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACAGGGAGTGTGGGCTGTaGGGCAGGAGCGAGCTAAAC +
Preference number: 4 (lower is better)
Translates to: EDDRHGRGQLFQPRFSDDRECGL*GRSELN
Trigger: GTTTAGCTCGCTCCTGCCTCACAGCCCACACTCCCT...GTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGTCATCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTCCAGCATCCCTGACTaGTGCGTAGCGCTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGSSIPD*CVALVE
Trigger: CTCAACAAGCGCTACGCAGCAGTCAGGGATGCTGGA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGCCTGCATGAGCTGCTaGCAGTGGCGTTCCCGAATG +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVACMSC*QWRSRM
Trigger: CATTCGGGAACGCCACTGGCAGCAGCTCATGCAGGC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTCTTCGTCCCAGCGATaGCGGAGCTGGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSSSSQR*RSWACQ
Trigger: CTGGCAGGCCCAGCTCCGGCATCGCTGGGACGAAGA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCGGTGGTCCATGTGCTaGCGGATGAGGGTGTGCGGG +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSRWSMC*RMRVCG
Trigger: CCCGCACACCCTCATCCGGCAGCACATGGACCACCG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAGAGCGGAAGGCCAGGTaGTGCGTCAGGATTGTGTTG +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAERKAR*CVRIVL
Trigger: CAACACAATCCTGACGCAGCACCTGGCCTTCCGCTC...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CATGAAGAGTCCGTACACGTAGGAGCCCTCTCGCGGAGGAGCGGTCATGTCCTCGCCACCGCTCGGTGTTaGCCAGGATGGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: HEESVHVGALSRRSGHVLATARC*PGWWHS
Trigger: AGAATGCCACCATCCTGGGCAACACCGAGCGGTGGC...GAGGACATGACCGCTCCTCCGCGAGAGGGCTCCTACGTGTACGGACTCTTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAAGGTTGATCACCCGCTaGTTCACCTCGTTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEARLITR*FTSLAG
Trigger: CCCTGCCAACGAGGTGAAGCAGCGGGTGATCAACCT...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCACCTCATGGCTGCCCGTaGTGTAGTGCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAPHGCP*CSAPAS
Trigger: AGAAGCTGGAGCACTACAGCACGGGCAGCCATGAGG...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCGAACTTGCGCCTCTCTaGCACCACAGCGTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGELAPL*HHSVEV
Trigger: TACTTCCACGCTGTGGTGGCAGAGAGGCGCAAGTTC...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTCCTGGGCGCCGAACTTaGGCCTCTCTGCCACCACAG +
Preference number: 4 (lower is better)
Translates to: QRHGCQDPLRCLLFGLQVPGRRT*ASLPPQ
Trigger: CTGTGGTGGCAGAGAGGCGCAAGTTCGGCGCCCAGG...AACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCAGCACATCCCGGATCTaGTGGGACCAGTCGATGATG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGSTSRI*WDQSMM
Trigger: CATCATCGACTGGTCCCACCAGATCCGGGATGTGCT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATGGCCACGATCATTTTaGCCACCACGTCCCGTGCGT +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAWPRSF*PPRPVR
Trigger: ACGCACGGGACGTGGTGGCCAAAATGATCGTGGCCA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCACCACCCATGATGAGATaGAGGGACTGGGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAPPMMR*RDWVRV
Trigger: CACCCTGACCCAGTCCCTCCATCTCATCATGGGTGG...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCAGTAGCGGATGCGGATaGTTTCCGTGGTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGSSGCG*FPWCGP
Trigger: TGGTCCACACCACGGAAACCATCCGCATCCGCTACT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGCAGCTGGGAACTTTCTaGCTCGTACCCGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVQLGTF*LVPAAR
Trigger: CCGTGCTGCGGGTACGAGCCAGAAAGTTCCCAGCTG...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAACAGCGGCCAAGAGTTaGTCCTCGAGTCCATCCCTG +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEATAAKS*SSSPSL
Trigger: CAGGGATGGACTCGAGGACCAACTCTTGGCCGCTGT...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGATCTGGGCGCTCTTTaGCCACCACAGCGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVDLGAL*PPQRPR
Trigger: TCTTGGCCGCTGTGGTGGCCAAAGAGCGCCCAGATC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGTAGGTCATGCGATCTaGCCGCAGGCAGCGCACCAT +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVVGHAI*PQAAHH
Trigger: ATGGTGCGCTGCCTGCGGCCAGATCGCATGACCTAC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCAGGGCACCTTGGGGTTaGCCTCCAGGTAGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGRAPWG*PPGSCR
Trigger: TCTACAACTACCTGGAGGCCAACCCCAAGGTGCCCT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCGAGCAAGTTGTCCAGTaGAGAGGGGATCCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGEQVVQ*RGDPLH
Trigger: ATGGAGAGGATCCCCTCTTCACTGGACAACTTGCTC...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATTCCCAGGCCCACCTTaGGAGGTTTGTCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAFPGPP*EVCHWH
Trigger: ATGCCAGTGACAAACCTCTCAAGGTGGGCCTGGGAA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTGGGGCCGTCATGGGTaGTGTTGGCCAGGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSWGRHG*CWPGLA
Trigger: TGCGAGACCTGGCCAACATCACCCATGACGGCCCCA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTTAATCCTGCAGATGTaGGCCACGGCGTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGLILQM*ATASSN
Trigger: GTTTGAGGACGCCGTGGCTCACATCTGCAGGATTAA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCAGGCCAGCAGGTCATTaGTCAGCACCAGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGRPAGH*SAPETA
Trigger: AGCAGTTTCTGGTGCTGATCAATGACCTGCTGGCCT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGCCCAGGGATCTCTCCTaGGGCCAGCAGGTCATTGAT +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVPRDLS*GQQVID
Trigger: ATCAATGACCTGCTGGCCTCAGGAGAGATCCCTGGG...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATTGATGAGGGTGCACTaGGCCTGCATCTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEALMRVH*ACISGL
Trigger: CAAGCCAGAGATGCAGGCTCAGTGCACCCTCATCAA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTCTCGTCCGTCAGGTTaGTCACCCGCTGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVSRPSG*SPAASP
Trigger: AGGTGAAGCAGCGGGTGATCAACCTGACGGACGAGA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp GCAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTATCCCGCCCCAGCCTTaGTGCTGGAGGAAGTCCACT +
Preference number: 4 (lower is better)
Translates to: AAPRLPGSTSLPSLWSSSIPPQP*CWRKST
Trigger: AGTGGACTTCCTCCAGCATCAAGGCTGGGGCGGGAT...ACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGCGGAACAGCTTCTCTaGGGTGACCGTCAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVAEQLL*GDRQKA
Trigger: GGCTTTCTGACGGTCACCTCAGAGAAGCTGTTCCGC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGAGCGAGCCCCTTCCATaGAGAGTCCGTACACGTAGG +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVSEPLP*RVRTRR
Trigger: CCTACGTGTACGGACTCTTCATGGAAGGGGCTCGCT...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTCACAGGTGCACAGGTaGAGGGCTGAGTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVSQVHR*RAELWS
Trigger: GGACCACAACTCAGCCCTTCACCTGTGCACCTGTGA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAGCAGCGAGGTCAATCTaGAGGTTTCGGATCCTGGAC +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAAARSI*RFRILD
Trigger: GTCCAGGATCCGAAACCTTCAGATTGACCTCGCTGC...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCACCTGGGCTGAGTCTTTaGTCAGCACATCCCGGATCT +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAPGLSL*SAHPGS
Trigger: AGATCCGGGATGTGCTGAGCAAAGACTCAGCCCAGG...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTTACAGCCAGGGAGATaGCACTCAGGACTTCCTCGA +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGLQPGR*HSGLPR
Trigger: TCGAGGAAGTCCTGAGTGGCATCTCCCTGGCTGTAA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTACTCGTCCTCCTTaGTGTACATTCCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGCTRPP*CTFPGP
Trigger: TGGGCCTGGGAATGTACAGCAAGGAGGACGAGTACA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGATCAGCACCAGAAACTaGTCCTCGGCCACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVISTRN*SSATWE
Trigger: CTCCCAGGTGGCCGAGGAGCAGTTTCTGGTGCTGAT...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTGTCCTTGGGGATCTTaGCCCCAGGTGCGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVCPWGS*PQVRSE
Trigger: TTCTGACCGCACCTGGGGGCAAGATCCCCAAGGACA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCTTCTCTTGTGCCTCTaGCAGCTCTGCATTAGCCTC +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGLLLCL*QLCISL
Trigger: GAGGCTAATGCAGAGCTGGCAGAGGCACAAGAGAAG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp GAAGATGACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACGGTAGTCCTCATGGCTaGCCGTGCTGTAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: EDDRHGRGQLFQPRFSDDGSPHG*PCCSAP
Trigger: TGGAGCACTACAGCACGGGCAGCCATGAGGACTACC...GTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGTCATCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAGAACTTGCGCCTCTCTaGCACCACAGCGTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAELAPL*HHSVEV
Trigger: TACTTCCACGCTGTGGTGGCAGAGAGGCGCAAGTTC...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCGCATTTCCAGGACAGTaGGGAACAGCTTCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGAFPGQ*GTASLR
Trigger: CCTCAGAGAAGCTGTTCCGCACTGTCCTGGAAATGC...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGGACACTCCCGTGCCTaGCCCCGAGTCCGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSGHSRA*PRVRLF
Trigger: AAAGAGACGGACTCGGGGGCAGGCACGGGAGTGTCC...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp GCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTAAAGGTCCAGGCGGAGCAGCAGGTCTaGGTACCAGGCCGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: AARIHFAAFSLVFKLKVQAEQQV*VPGRQA
Trigger: GGCCTGGCGGCCTGGTACGCAGACCTGCTGCTCCGC...CTGGACCTTTAACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGAGGGGATCCTCTCCATaGACTCCAGCGTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVRGSSP*TPACHP
Trigger: TGGATGGCACGCTGGAGTCCATGGAGAGGATCCCCT...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTCGGAGGCCGCCATCTaGGCATCGTACAAGATCTTA +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGSEAAI*ASYKIL
Trigger: TAAGATCTTGTACGATGCCCAGATGGCGGCCTCCGA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTTCTGCAGCTGCACCTaGTTGTCCTCCAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVFCSCT*LSSSVS
Trigger: GGAGACGCTGGAGGACAACCAGGTGCAGCTGCAGAA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGAAGATGCTCTCCAGGTaGCTCCAGGTTCGCTGGACC +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVKMLSR*LQVRWT
Trigger: GGTCCAGCGAACCTGGAGCCACCTGGAGAGCATCTT...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGTGGCCGTCCTCAGGTaGCTGATTTCGAACACCAGC +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVVAVLR*LISNTS
Trigger: GCTGGTGTTCGAAATCAGCCACCTGAGGACGGCCAC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGGCTGCTTATCCTCTaGATAGCCATGGAGACCGAG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGWLLIL*IAMETE
Trigger: CTCGGTCTCCATGGCTATCCAGAGGATAAGCAGCCA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CATGAAGAGTCCGTACACGTAGGAGCCCTCTCGCGGAGGAGCGGTCATGTCCTCTCGATGCCGACCACCTaGATCAGTTGGTCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: HEESVHVGALSRRSGHVLSMPTT*ISWSAL
Trigger: GAGCGCAGACCAACTGATCCAGGTGGTCGGCATCGA...GAGGACATGACCGCTCCTCCGCGAGAGGGCTCCTACGTGTACGGACTCTTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCCAGTGCCTGCCTCTTaGGCGCCACGTCGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSPVPAS*APRRSR
Trigger: TCTACTGCGACGTGGCGCCCAAGAGGCAGGCACTGG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp ACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTCAGGCGGAACTTGGGGTaGTACTCCACCTCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: TGMAGVSSFSRASAMTPVRRNLG*YSTSLS
Trigger: TGACAAGGAGGTGGAGTACCACCCCAAGTTCCGCCT...GACTGGAGTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCACACCGGGCCACCAGGTaGATATTCTGCAGAATGACC +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAHRATR*IFCRMT
Trigger: GGTCATTCTGCAGAATATCCACCTGGTGGCCCGGTG...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCATAGAAGAGAGCCGTaGACAGATCTTCCACGTCGG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGHRREP*TDLPRR
Trigger: CCGACGTGGAAGATCTGTCCACGGCTCTCTTCTATG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTGCGATGACTCCAGTCTaGGTGTCCCAGCGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: QRHGCQDPLRCLLFGLQVAMTPV*VSQRAP
Trigger: AGGGGCTCGCTGGGACACCCAGACTGGAGTCATCGC...AACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGAAGGTTTCGGATCCTaGACCCCAGCCGAGTCCCCG +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSEGFGS*TPAESP
Trigger: CGGGGACTCGGCTGGGGTCCAGGATCCGAAACCTTC...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCGCTTTGCGGAGGACTTaGTACAGCTGCAGTCATCAA +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGALRRT*YSCSHQ
Trigger: TTGATGACTGCAGCTGTATCAAGTCCTCCGCAAAGC...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGAGGCCCAGAAGCAGGTaGACACGAAGTACAGCTCGT +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVRPRSR*TRSTAR
Trigger: ACGAGCTGTACTTCGTGTTCACCTGCTTCTGGGCCT...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGGTGGAGGCCATGGTaGCTCTATGCAATGTTTCCT +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGWWRPW*LYAMFP
Trigger: AGGAAACATTGCATAGAGTCACCATGGCCTCCACCA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCGCAGCCTTTATGTACTaGGCAGCGAGGTCAATCTTG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGAAFMY*AARSIL
Trigger: CAAGATTGACCTCGCTGCTCAGTACATAAAGGCTGC...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTGCCTTGGTAGGGCTTaGAGGCCTTCAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSCLGRA*RPSGRP
Trigger: AGGCCTGCCTGAAGGCCTTCAAGCCCTACCAAGGCA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp GCAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTCGCCGATGTTCTCAATaGGCAAGGTGTCCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: AAPRLPGSTSLPSLWSSSRRCSQ*ARCPLP
Trigger: CGGAAGGGGACACCTTGCTCATTGAGAACATCGGCG...ACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGAGGATGAAGAAGATTaGCGTGGAGGGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVEDEED*RGGAAL
Trigger: GAGAGCAGCCCCTCCACGTCAATCTTCTTCATCCTC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCCCCCGGGGAGAGGATaGAGAAGATTGACGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSPPGRG*RRLTWR
Trigger: CCTCCACGTCAATCTTCTTCATCCTCTCCCCGGGGG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTCCCCCGGGGAGAGGATaGAGAAGATTGACGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QRHGCQDPLRCLLFGLQVPPGRG*RRLTWR
Trigger: CCTCCACGTCAATCTTCTTCATCCTCTCCCCGGGGG...AACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATTCAGCCTGTGGACCTaGTTCACGATGTCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAFSLWT*FTMSSE
Trigger: CTCGGAAGACATCGTGAAGCAGGTCCACAGGCTGAA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTCCAGGCTGCCCAGGTaGTCCGGAATAGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSSRLPR*SGIGSK
Trigger: CTTGCTGCCTATTCCGGAGCACCTGGGCAGCCTGGA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGGTTGCAGAACTCCTaGAGGATGACGATGATCCTG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGWLQNS*RMTMIL
Trigger: CAGGATCATCGTCATCCTGCAGGAGTTCTGCAACCA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCACTGTGGAGGTTCAGCTaGAGTAAATCTGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEALWRFS*SKSARV
Trigger: GACCCTGGCAGATTTACTGCAGCTGAACCTCCACAG...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTCAGCACCTTTTCCATaGCCGACTCCTTCACGGCCT +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVSAPFP*PTPSRP
Trigger: AGGCCGTGAAGGAGTCGGGCATGGAAAAGGTGCTGA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTAGCCACACTTCCACCTaGCCCGAGAGGTCGCATTCC +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSSHTST*PERSHS
Trigger: GGAATGCGACCTCTCGGGGCAGGTGGAAGTGTGGCT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGCAGGCAGCGCACCATaGACAGCTTCTGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPAGSAP*TASAGP
Trigger: CGGCCCTGCAGAAGCTGTGCATGGTGCGCTGCCTGC...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp TGGGCTGTGAGGCAGGAGCGAGCTAAACCTGTAGGAGCAGCGCCACGGCTGCCACTTCCACGAACTTGCTaGCCATCTTTTCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: WAVRQERAKPVGAAPRLPLPRTC*PSFPPR
Trigger: TCGTGGAGGAAAAGATGGGCAGCAAGTTCGTGGAAG...TGGCAGCCGTGGCGCTGCTCCTACAGGTTTAGCTCGCTCCTGCCTCACAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp GAAGATGACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACACCACCTCTTGTCCCTaGCCCAGGGACACATTATGG +
Preference number: 4 (lower is better)
Translates to: EDDRHGRGQLFQPRFSDDTTSCP*PRDTLW
Trigger: CCATAATGTGTCCCTGGGGCAGGGACAAGAGGTGGT...GTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGTCATCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATGTTCTTGGTCTCCATaGGGTCCACAGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEACSWSP*GPQEWP
Trigger: AGGCCATTCCTGTGGACCGCATGGAGACCAAGAACA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGAGCAGCGCCACGGCTaGCAGGATCCACTTCGCTGC +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPEQRHG*QDPLRC
Trigger: GCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTGCTC...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAAGAGCACGATGTCGTTaGCTTCCTTCAGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEARARCR*LPSALQ
Trigger: CTGAAGGGCTGAAGGAAGCCAACGACATCGTGCTCT...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTAGGCGGACCTCCCGGTaGCAGGCCTTGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPRRTSR*QALSCL
Trigger: CAAGCAGCTCAAGGCCTGCCACCGGGAGGTCCGCCT...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCAGTGGGCCAGGTACTTaGACATCATCAGGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGSGPGT*TSSGSA
Trigger: TGCAGAACCTGATGATGTCCAAGTACCTGGCCCACT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAACCTCCTTCAGGAAGTaGGCCAGGTACTTGGACATC +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEATSFRK*ARYLDI
Trigger: GATGTCCAAGTACCTGGCCCACTTCCTGAAGGAGGT...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCACTTGTCCAGGCACGTaGGCAGGTACTTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGTCPGT*AGTCQR
Trigger: TCTTTGACAAGTACCTGCCCACGTGCCTGGACAAGT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTTGGCCAGCAGGTTCTaGTACAGTTTGATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGLASRF*YSLICS
Trigger: GGAGCAGATCAAACTGTACCAGAACCTGCTGGCCAA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCGTTCCGTTCTCTTCTTaGCCAGCAGGTTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGVPFSS*PAGSGT
Trigger: TGTACCAGAACCTGCTGGCCAAGAAGAGAACGGAAC...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATTCAAATCATCCACCTaGGAAGCCGTGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAFKSST*EAVLCS
Trigger: GCTGCAGAGCACGGCTTCCCAGGTGGATGATTTGAA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACTCATAGATCCAGTGCCTGCCTCTTaGGCGCCACGTCGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: PDIGGAADACFVHGTLIDPVPAS*APRRSR
Trigger: TCTACTGCGACGTGGCGCCCAAGAGGCAGGCACTGG...ATCTATGAGTGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp ACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATGGCCTTCGCTGGGGAGGCCCTaGTTGTTCCAGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: TRDTHRCSWSPCGPQEWPSLGRP*LFQVAT
Trigger: CGTGGCCACCTGGAACAACCAGGGCCTCCCCAGCGA...AGGCCATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp GAAGATGACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACTGTTGCCCAGGATGGTaGCATTCTCGGTGGACATGC +
Preference number: 4 (lower is better)
Translates to: EDDRHGRGQLFQPRFSDDCCPGW*HSRWTC
Trigger: GCATGTCCACCGAGAATGCCACCATCCTGGGCAACA...GTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGTCATCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCTGAGCCTGCATCTCTaGCTTGTAGTGTGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGLSLHL*LVVWVE
Trigger: TTCAACCCACACTACAAGCCAGAGATGCAGGCTCAG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTAGGTCATGCGATCTaGCCGCAGGCAGCGCACCAT +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSVGHAI*PQAAHH
Trigger: ATGGTGCGCTGCCTGCGGCCAGATCGCATGACCTAC...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAACACTGTGTATCAGCTaGAGGCAAACAGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEATLCIS*RQTASP
Trigger: GGGAGAAGCTGTTTGCCTTCAGCTGATACACAGTGT...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGTTCATGGATGCACTTaGGGTTCAGCAGCCGAGTGT +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVVHGCT*GSAAEC
Trigger: ACACTCGGCTGCTGAACCTCAAGTGCATCCATGAAC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTTCAGGGGCCGCTCCATaGGGCCCCCACACATGTACA +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPSGAAP*GPHTCT
Trigger: TGTACATGTGTGGGGGCCTCATGGAGCGGCCCCTGA...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCCTCCAGGGTCGGGTTaGAGGTCAGCCCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPPPGSG*RSAHPR
Trigger: ACGAGGATGGGCTGACCTTCAACCCGACCCTGGAGG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTTGCCGTGATTTTCTaGTGCAAAGCCAGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSVAVIF*CKARAA
Trigger: CGCGGCCCTGGCTTTGCATCAGAAAATCACGGCAAC...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCCCAGGGATCTCTCCTaGGGCCAGCAGGTCATTGAT +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSPRDLS*GQQVID
Trigger: ATCAATGACCTGCTGGCCTCAGGAGAGATCCCTGGG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp GTTAAAGGTCCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACCCTGGACATCTCGTTaGCGGTGGTGTGCACGTAGG +
Preference number: 4 (lower is better)
Translates to: VKGPDIGGAADACFVHGTPWTSR*RWCARR
Trigger: CCTACGTGCACACCACCGTCAACGAGATGTCCAGGG...TGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGGACCTTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp GCAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTGATCCAGGCCATTCGTaGTCGGGATGGGGACCTTTA +
Preference number: 4 (lower is better)
Translates to: AAPRLPGSTSLPSLWSSSDPGHS*SGWGPL
Trigger: TAAAGGTCCCCATCCCGATCACGAATGGCCTGGATC...ACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATACTTGGGGCAGGGGGTaGAGCCCATCCAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYTWGRG*SPSSSA
Trigger: GGCGCTGCTGGATGGGCTGCACCCCCTGCCCCAAGT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCCTCGTCCAGCTCCATaGGGATCTCAAACAGGGGAG +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSPRPAP*GSQTGE
Trigger: CTCCCCTGTTTGAGATCCGCATGGAGCTGGACGAGG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAGTCCTCCGCAGTGACTaGACACCCATATATCAGGAA +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAVLRSD*TPIYQE
Trigger: TTCCTGATATATGGGTGTGCAGTCACTGCGGAGGAC...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAAGCAGCTCGATGGTTTaGTTCAGGGGCTCAAACATG +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEASSSMV*FRGSNM
Trigger: CATGTTTGAGCCCCTGAAGCAAACCATCGAGCTGCT...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTTGGCCTTCTCCGACTaGACCTTGCGCCTCTCGATC +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSLAFSD*TLRLSI
Trigger: GATCGAGAGGCGCAAGGTGCAGTCGGAGAAGGCCAA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCATTCTCGGTGGACATaGGGTCGCTGGGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPHSRWT*GRWGGP
Trigger: AGGGCCTCCCCAGCGACCGCATGTCCACCGAGAATG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCAGACTTGGTGAGGTTTaGCTTCAGCTGTTCCAGATC +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGRLGEV*LQLFQI
Trigger: GATCTGGAACAGCTGAAGGCAAACCTCACCAAGTCT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGATCTCGCTGGCTGTGTaGTTGGTGGTCTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVISLAV*LVVSRF
Trigger: GAATCTGGAGACCACCAAGCACACAGCCAGCGAGAT...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTAGGTTGATCACCCGCTaGTTCACCTCGTTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSRLITR*FTSLAG
Trigger: CCCTGCCAACGAGGTGAAGCAGCGGGTGATCAACCT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CATGAAGAGTCCGTACACGTAGGAGCCCTCTCGCGGAGGAGCGGTCATGTCCTCACCATGCACAGCTTCTaGAGGGCCGTCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: HEESVHVGALSRRSGHVLTMHSF*RAVLFF
Trigger: GAAGAACAAGACGGCCCTGCAGAAGCTGTGCATGGT...GAGGACATGACCGCTCCTCCGCGAGAGGGCTCCTACGTGTACGGACTCTTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp GCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTAAAGGTCCAGGCAGGCAGCGCACCATaGACAGCTTCTGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: AARIHFAAFSLVFKLKVQAGSAP*TASAGP
Trigger: CGGCCCTGCAGAAGCTGTGCATGGTGCGCTGCCTGC...CTGGACCTTTAACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp GAAGATGACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACGCATTTCCAGGACAGTaGGGAACAGCTTCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: EDDRHGRGQLFQPRFSDDAFPGQ*GTASLR
Trigger: CCTCAGAGAAGCTGTTCCGCACTGTCCTGGAAATGC...GTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGTCATCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTCCGTCTCTTTTGGCTaGATTTCCAGGACAGTGCGG +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVSVSFG*ISRTVR
Trigger: CCGCACTGTCCTGGAAATGCAGCCAAAAGAGACGGA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp TGGGCTGTGAGGCAGGAGCGAGCTAAACCTGTAGGAGCAGCGCCACGGCTGCCACTTTTCCGCTGCCTTTaGCATGATCTCAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: WAVRQERAKPVGAAPRLPLFRCL*HDLSHV
Trigger: AACATGGCTGAGATCATGGCAAAGGCAGCGGAAAAG...TGGCAGCCGTGGCGCTGCTCCTACAGGTTTAGCTCGCTCCTGCCTCACAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp GCAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTTCCTGGCCATGGACTaGATGATGGCCGTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: AAPRLPGSTSLPSLWSSSFLAMD*MMAVRN
Trigger: GTTCCTCACGGCCATCATGCAGTCCATGGCCAGGAA...ACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTCATTCTTCAGCCTGTaGACCTGCTTCACGATGTCT +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGSFFSL*TCFTMS
Trigger: AGACATCGTGAAGCAGGTCCACAGGCTGAAGAATGA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGAGGCATGTTTTTGTaGATCAGGGGGATGTTCCCC +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVGGMFL*IRGMFP
Trigger: GGGGAACATCCCCCTGATCCACAAAAACATGCCTCC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTTGCTGAAGTTGACGTaGATGAGGTTGCTAGCGGCG +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVLLKLT*MRLLAA
Trigger: CGCCGCTAGCAACCTCATCCACGTCAACTTCAGCAA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATCTGCAACCATGGCTTaGATCTTCACTCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEASATMA*IFTPAS
Trigger: GGATGCTGGAGTGAAGATCCAAGCCATGGTTGCAGA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTCCTGCAGCTTCAAGTaGATCTCCTCTGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVSCSFK*ISSGIS
Trigger: GGAGATGCCAGAGGAGATCCACTTGAAGCTGCAGGA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCAAGCCTTTTCACAGATaGCCAAGCTCTTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGKPFHR*PSSSSG
Trigger: CCCTGAAGAAGAGCTTGGCCATCTGTGAAAAGGCTT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAGCCCGAATTGCATCCTaGACACATTTTACCTGCACG +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAARIAS*THFTCT
Trigger: CGTGCAGGTAAAATGTGTCCAGGATGCAATTCGGGC...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCAAAGAGGCCTGCAGTaGGACATCGGGATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSQRGLQ*DIGIQL
Trigger: GAGCTGGATCCCGATGTCCCACTGCAGGCCTCTTTG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTGCTCCTCGGCCACCTaGGAGTCTGTCATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSCSSAT*ESVIRN
Trigger: GTTCCTGATGACAGACTCCCAGGTGGCCGAGGAGCA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp GCAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTCCAAGGGACTTGACTTaGGGTCGCATGGAGGAGATG +
Preference number: 4 (lower is better)
Translates to: AAPRLPGSTSLPSLWSSSPRDLT*GRMEEM
Trigger: CATCTCCTCCATGCGACCCCAAGTCAAGTCCCTTGG...ACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATTGGCCAGCAGGTTCTaGTACAGTTTGATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEALASRF*YSLICS
Trigger: GGAGCAGATCAAACTGTACCAGAACCTGCTGGCCAA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp TGGGCTGTGAGGCAGGAGCGAGCTAAACCTGTAGGAGCAGCGCCACGGCTGCCAACCTTGACTTCTTCCTaGTCAGCAATGGCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: WAVRQERAKPVGAAPRLPTLTSS*SAMAFS
Trigger: AGAGAAGGCCATTGCTGACCAGGAAGAAGTCAAGGT...TGGCAGCCGTGGCGCTGCTCCTACAGGTTTAGCTCGCTCCTGCCTCACAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGTGTCCAGAGCCTCCTaGGCTGCCAGCAGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYVSRAS*AASRAG
Trigger: ACCGGCCCTGCTGGCAGCCCAGGAGGCTCTGGACAC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTACAGCGGCCAAGAGTTaGTCCTCGAGTCCATCCCTG +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSTAAKS*SSSPSL
Trigger: CAGGGATGGACTCGAGGACCAACTCTTGGCCGCTGT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCGAAATCCAGCTCCACTaGGTTCAGCTCCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGEIQLH*VQLLLH
Trigger: ATGAAGAAGGAGCTGAACCCAGTGGAGCTGGATTTC...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCACGAGTCCGTCTCTTTTaGCTGCATTTCCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEARVRLF*LHFQDS
Trigger: ACTGTCCTGGAAATGCAGCCAAAAGAGACGGACTCG...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCCAGCCACACGGTGGTaGGCAGGGCAAAGTCTGTCG +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPPATRW*AGQSLS
Trigger: CGACAGACTTTGCCCTGCCCACCACCGTGTGGCTGG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATAGGCACAGCCCTCGCTaGCCCTGGTTTCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYRHSPR*PWFPLP
Trigger: GGGGAGGGGAAACCAGGGCCAGCGAGGGCTGTGCCT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCAATCTTGGGGATGTTaGAGTCTCTCAGCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSQSWGC*SLSAPA
Trigger: TGCGGGCGCTGAGAGACTTCAACATCCCCAAGATTG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp GTTAAAGGTCCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACAAGAAGCGGACGATGTTaGTGCACCAGGAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: VKGPDIGGAADACFVHGTRSGRC*CTRSTG
Trigger: GCCTGTGCTCCTGGTGCATCAACATCGTCCGCTTCT...TGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGGACCTTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTCCGGTATTTCTTGGTaGAGTAGCCCACGTAGGACA +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVSGISW*SSPRRT
Trigger: TGTCCTACGTGGGCTACTTCACCAAGAAATACCGGA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CATGAAGAGTCCGTACACGTAGGAGCCCTCTCGCGGAGGAGCGGTCATGTCCTCTCCGGTATTTCTTGGTaGAGTAGCCCACGTAGGACA +
Preference number: 4 (lower is better)
Translates to: HEESVHVGALSRRSGHVLSGISW*SSPRRT
Trigger: TGTCCTACGTGGGCTACTTCACCAAGAAATACCGGA...GAGGACATGACCGCTCCTCCGCGAGAGGGCTCCTACGTGTACGGACTCTTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp CAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTGAGGAAGTCCACTGGTaGGACCACTCCGGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: QRHGCQDPLRCLLFGLQVEEVHW*DHSGLK
Trigger: TTTAAGGCCGGAGTGGTCTCACCAGTGGACTTCCTC...AACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTATCCCGCCCCAGCCTTaGTGCTGGAGGAAGTCCACT +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPIPPQP*CWRKST
Trigger: AGTGGACTTCCTCCAGCATCAAGGCTGGGGCGGGAT...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp GTTAAAGGTCCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACCAGGTTCAGCTCCTTaGGCGAACGGCGCATTTCGT +
Preference number: 4 (lower is better)
Translates to: VKGPDIGGAADACFVHGTPGSAP*ANGAFR
Trigger: ACGAAATGCGCCGTTCGCTCAAGGAGCTGAACCTGG...TGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGGACCTTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp CAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTCTTCCACGTCGGTCGTaGTGGTCAGTTCTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: QRHGCQDPLRCLLFGLQVLPRRS*WSVLPS
Trigger: TGAAGGGAGAACTGACCATCACGACCGACGTGGAAG...AACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTATCAGGTTCTGCAGCTaGACCTGGTTGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSIRFCS*TWLSSS
Trigger: GCTGGAGGACAACCAGGTGCAGCTGCAGAACCTGAT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTAGACGTAGACCATGGTaGCCAGGGCTCTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPRRRPW*PGLCPG
Trigger: ACCTGGGCAGAGCCCTGGGCACCATGGTCTACGTCT...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGGACACATTTTACCTaGACGGCAATCACAGACAAG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGWTHFT*TAITDK
Trigger: CTTGTCTGTGATTGCCGTGCAGGTAAAATGTGTCCA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTTCTCCGACTGCACCTTaGGCCTCTCGATCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPSPTAP*ASRSSC
Trigger: GCAGCTGGATCGAGAGGCGCAAGGTGCAGTCGGAGA...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATCCCGCTGATGTACGCTaGCAGGCGGGAGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYPADVR*QAGEAL
Trigger: CAGAGCCTCTCCCGCCTGGCAGCGTACATCAGCGGG...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCACTGGATCAGTTGGTCTaGGCTCTCATTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEALDQLV*ALILLL
Trigger: AAGCAGAAGAATGAGAGCGCAGACCAACTGATCCAG...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGCCACCGCTCGGTGTTaGCCAGGATGGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPATARC*PGWWHS
Trigger: AGAATGCCACCATCCTGGGCAACACCGAGCGGTGGC...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGCGCGGGACACTCCCGTaGCTGCCCCCGAGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRRGTLP*LPPSPS
Trigger: AGACGGACTCGGGGGCAGGCACGGGAGTGTCCCGCG...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATACCACCGCGATCAGCTaGTCCACGGGTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYTTAIS*STGVGL
Trigger: CAGCCCCACACCCGTGGACCAGCTGATCGCGGTGGT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTACATCCCGGATCTGGTaGGACCAGTCGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSTSRIW*DQSMMV
Trigger: CACCATCATCGACTGGTCCCACCAGATCCGGGATGT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAGTCATCTCGATGATTTaGTTGCAGAACTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAVISMI*LQNSCR
Trigger: CCTGCAGGAGTTCTGCAACCAAATCATCGAGATGAC...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTATAGAGTTCCTCAATaGTCTGGATGCGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGYRVPQ*SGCAGR
Trigger: TCTTCCAGCGCATCCAGACCATTGAGGAACTCTATA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTAAGAGTTTGGACAGGTaGCGGCTCACCTCCACGGGG +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPKSLDR*RLTSTG
Trigger: CCCCGTGGAGGTGAGCCGCCACCTGTCCAAACTCTT...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGAGAACTCTCCACCTTaGCCACGATCATTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVENSPP*PRSFWP
Trigger: TGGCCAAAATGATCGTGGCCAAGGTGGAGAGTTCTC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCGTGATCTCCGGCACTaGCGTGATCTTCTTGAACCC +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSRDLRH*RDLLEP
Trigger: GGGTTCAAGAAGATCACGCCAGTGCCGGAGATCACG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGACCACCTGGATCAGTTaGTCTGCGCTCTCATTCTTC +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVTTWIS*SALSFF
Trigger: GAAGAATGAGAGCGCAGACCAACTGATCCAGGTGGT...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTAGATCACCCTGTTCGTaGCATCGGCCTCTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSRSPCS*HRPLAD
Trigger: GTCAGCAAGAGGCCGATGCCACGAACAGGGTGATCT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCCTGGTTGTTCCAGGTaGCCACGTCCGCGTCATCTG +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPPGCSR*PRPRHL
Trigger: CAGATGACGCGGACGTGGCCACCTGGAACAACCAGG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTCGCTGGGGAGGCCCTaGTTGTTCCAGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYSLGRP*LFQVAT
Trigger: CGTGGCCACCTGGAACAACCAGGGCCTCCCCAGCGA...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp GCAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTATCCACTTGATTCCTTaGAGCTGGGCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: AAPRLPGSTSLPSLWSSSIHLIP*SWASTI
Trigger: GATCGTGGACGCCCAGCTCCAAGGAATCAAGTGGAT...ACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCGCTGGCTGTGTGCTTaGTGGTCTCCAGATTCTCCA +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSRWLCA*WSPDSP
Trigger: TGGAGAATCTGGAGACCACCAAGCACACAGCCAGCG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTCTCCTCGATCTCGCTaGCTGTGTGCTTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSSPRSR*LCAWWS
Trigger: AGACCACCAAGCACACAGCCAGCGAGATCGAGGAGA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp GCAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTGGGTGGTCCTCTGGATaGCTTTCTCAAACACCACGT +
Preference number: 4 (lower is better)
Translates to: AAPRLPGSTSLPSLWSSSGWSSG*LSQTPR
Trigger: ACGTGGTGTTTGAGAAAGCCATCCAGAGGACCACCC...ACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGCAGGGGTGGTCCTCTaGATGGCTTTCTCAAACACC +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSAGVVL*MAFSNT
Trigger: GGTGTTTGAGAAAGCCATCCAGAGGACCACCCCTGC...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGCTGCTTCACCTCGTTaGCAGGGGTGGTCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPAASPR*QGWSSG
Trigger: TCCAGAGGACCACCCCTGCCAACGAGGTGAAGCAGC...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTATCTCCAGGGTGTCCTaGGTGAACAGGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPISRVS*VNRSRA
Trigger: GGCCCTGGACCTGTTCACCCAGGACACCCTGGAGAT...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTAGGGCACCTTGGGGTTaGCCTCCAGGTAGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: QRHGCQDPLRCLLFGLQVRAPWG*PPGSCR
Trigger: TCTACAACTACCTGGAGGCCAACCCCAAGGTGCCCT...AACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp GCAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTCATAGAAGAGAGCCGTaGACAGATCTTCCACGTCGG +
Preference number: 4 (lower is better)
Translates to: AAPRLPGSTSLPSLWSSSHRREP*TDLPRR
Trigger: CCGACGTGGAAGATCTGTCCACGGCTCTCTTCTATG...ACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTTCACTCCAGCATCCCTaGCTGCTGCGTAGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPSLQHP*LLRSAC
Trigger: ACAAGCGCTACGCAGCAGTCAGGGATGCTGGAGTGA...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGCAGGAAGCCGCGATCTaGGCCCACCTCCAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRQEAAI*AHLQGR
Trigger: CCGACCCTGGAGGTGGGCTCAGATCGCGGCTTCCTG...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTTGTCTTCGGAGCCGATaGAGATGCTCTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPCLRSR*RCSPGG
Trigger: GCCACCTGGAGAGCATCTTCATCGGCTCCGAAGACA...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATCCGCATTCCCGACGATaGACACGGAGTGGCGGACCT +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYPHSRR*TRSGGP
Trigger: AGGTCCGCCACTCCGTGTTCATCGTCGGGAATGCGG...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTAGGCCAGCAGGTCATTaGTCAGCACCAGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSRPAGH*SAPETA
Trigger: AGCAGTTTCTGGTGCTGATCAATGACCTGCTGGCCT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTACACGAAGGCAGAGATaGGCAGGACGTCCCCACACA +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPTRRQR*AGRPHT
Trigger: TGTGTGGGGACGTCCTGCTCATCTCTGCCTTCGTGT...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGCGTTTTGAGACTTGGTaGGGTTTGCCTTCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVRFETW*GLPSAV
Trigger: AACAGCTGAAGGCAAACCTCACCAAGTCTCAAAACG...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTCCTCGATTTCACCTTaGAGGCCCTTCAGCACCTCT +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSSSISP*RPFSTS
Trigger: AGAGGTGCTGAAGGGCCTGCAAGGTGAAATCGAGGA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCCAAGGGATCATATTTaGAGTCGGCAAAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGPRDHI*SRQKPS
Trigger: TGAAGGTTTTTGCCGACTGCAAATATGATCCCTTGG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGGGGCGGCAGTCGCACTaGAGCCAGCCGTGGAACACC +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRGRQSH*SQPWNT
Trigger: GGTGTTCCACGGCTGGCTGCAGTGCGACTGCCGCCC...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTTGCTCCGGCAGCTCCTaGAGCTTCAAGTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPCSGSS*SFKWIS
Trigger: GGAGATCCACTTGAAGCTGCAGGAGCTGCCGGAGCA...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTTTGGTATTTGCCCAGTaGTCCGGCAGCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPLVFAQ*SGSSCS
Trigger: GCTGCAGGAGCTGCCGGAGCACTGGGCAAATACCAA...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATCGAATGGCAGGGTTCTaGAGCTCGCTCACGGCACGC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYRMAGF*SSLTAR
Trigger: GCGTGCCGTGAGCGAGCTGCAGAACCCTGCCATTCG...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTGGTCGTCTCAGTCTTaGCGGTCCCAGCGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRWSSQS*RSQRGR
Trigger: CCGGCCCCGCTGGGACCGGCAAGACTGAGACGACCA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTTGGACCAAAGAGGCCTaGAGTGGGACATCGGGATCC +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPWTKEA*SGTSGS
Trigger: GGATCCCGATGTCCCACTGCAGGCCTCTTTGGTCCA...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCGGAAGTGGGGTTCATaGAGGCCACGTACTGACAAT +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSRKWGS*RPRTDN
Trigger: ATTGTCAGTACGTGGCCTGCATGAACCCCACTTCCG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp AGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACTCATAGATGTATCAGCACCAGAAACTaGTCCTCGGCCACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RHRWGRGCVFCTRDTHRCISTRN*SSATWE
Trigger: CTCCCAGGTGGCCGAGGAGCAGTTTCTGGTGCTGAT...ACATCTATGAGTGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGGTACAGTTTGATCTaGTCCAGAAAGGTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGWYSLI*SRKVLG
Trigger: ACCCAAAACCTTTCTGGAGCAGATCAAACTGTACCA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTTGCCTCTGCCAGCTCTaGATTAGCCTCCTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPCLCQL*ISLLQC
Trigger: GCACTGGAGGAGGCTAATGCAGAGCTGGCAGAGGCA...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTGGCCTTCCACGAACTTaGTGCCCATCTTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QRHGCQDPLRCLLFGLQVGLPRT*CPSFPP
Trigger: TGGAGGAAAAGATGGGCAGCAAGTTCGTGGAAGGCC...AACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTACTCCATCTCCTTGGTaGACATCTCCAGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSTPSPW*TSPGCP
Trigger: AGGACACCCTGGAGATGTGCACCAAGGAGATGGAGT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTCCGTCTCTTTTGGCTaGATTTCCAGGACAGTGCGG +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSSVSFG*ISRTVR
Trigger: CCGCACTGTCCTGGAAATGCAGCCAAAAGAGACGGA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAGCGGAGCAGCAGGTCTaGGTACCAGGCCGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERAEQQV*VPGRQA
Trigger: GGCCTGGCGGCCTGGTACGCAGACCTGCTGCTCCGC...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGGCCATTGTCATCTTaGCCTTTCCTTACACTGTGT +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVGPLSS*PFLTLC
Trigger: ACACAGTGTAAGGAAAGGCCAAGATGACAATGGCCC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTAGCCGTGGAACACCTTaGTGTTCTCGCACTTGGACA +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSSRGTP*CSRTWT
Trigger: TGTCCAAGTGCGAGAACACCAAGGTGTTCCACGGCT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTAGGCTGTTGGTGACGTaGTTGCTCAGGTGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPRLLVT*LLRCRL
Trigger: CAAGCGGCACCTGAGCAACCACGTCACCAACAGCCT...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTCTGGAAACGGTGGCTaGGGTGGCCGTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYSGNGG*GGRPQV
Trigger: CACCTGAGGACGGCCACCCCAGCCACCGTTTCCAGA...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTTACAGGAACATATTTaGGATCGCCAATCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGLQEHI*DRQSLE
Trigger: CTCAAGGGATTGGCGATCCCAAATATGTTCCTGTAA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCACAGCGTGACCCCCTaGCTCCTGAAGTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPHSVTP*LLKFST
Trigger: TGTGGAGAACTTCAGGAGCCAGGGGGTCACGCTGTG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTTCTGTCCCAGGCGGATaGCTTTCAGTTCACTCCTGT +
Preference number: 4 (lower is better)
Translates to: QRHGCQDPLRCLLFGLQVSVPGG*LSVHSC
Trigger: ACAGGAGTGAACTGAAAGCCATCCGCCTGGGACAGA...AACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp CCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACTCATAGATTCTCCTCGATCTCGCTaGCTGTGTGCTTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PDIGGAADACFVHGTLIDSPRSR*LCAWWS
Trigger: AGACCACCAAGCACACAGCCAGCGAGATCGAGGAGA...ATCTATGAGTGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCCTCGTTGGCAGGGGTaGTCCTCTGGATGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPPRWQG*SSGWLS
Trigger: AGAAAGCCATCCAGAGGACCACCCCTGCCAACGAGG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp TGGGCTGTGAGGCAGGAGCGAGCTAAACCTGTAGGAGCAGCGCCACGGCTGCCACCCAGGGACACATTATaGAGTTTTCCATTGTCTATG +
Preference number: 4 (lower is better)
Translates to: WAVRQERAKPVGAAPRLPPRDTL*SFPLSM
Trigger: CATAGACAATGGAAAACTCCATAATGTGTCCCTGGG...TGGCAGCCGTGGCGCTGCTCCTACAGGTTTAGCTCGCTCCTGCCTCACAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp CCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACTCATAGATCACCGGGCCACCAGGTaGATATTCTGCAGAATGACC +
Preference number: 4 (lower is better)
Translates to: PDIGGAADACFVHGTLIDHRATR*IFCRMT
Trigger: GGTCATTCTGCAGAATATCCACCTGGTGGCCCGGTG...ATCTATGAGTGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp CATGAAGAGTCCGTACACGTAGGAGCCCTCTCGCGGAGGAGCGGTCATGTCCTCACTCATAGATGTTCTTaGTCTCCATGCGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: HEESVHVGALSRRSGHVLTHRCS*SPCGPQ
Trigger: CTGTGGACCGCATGGAGACCAAGAACATCTATGAGT...GAGGACATGACCGCTCCTCCGCGAGAGGGCTCCTACGTGTACGGACTCTTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATGTAGTTGTCCTTGTTaGTGTTCTCGGACTTTGTCT +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEACSCPC*CSRTLS
Trigger: AGACAAAGTCCGAGAACATCAACAAGGACAACTACA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTTCGTGTCATCTCGATaGTTTGGTTGCAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVFVSSR*FGCRTP
Trigger: AGGAGTTCTGCAACCAAATCATCGAGATGACACGAA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAGCTCCAGGCTCCATTTaGGCTGCCCGGCCACGGGAG +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREAPGSI*AARPRE
Trigger: CTCCCGTGGCCGGGCAGCTCAAATGGAGCCTGGAGC...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCGTTGTAGATGTCGTTaGCCAGGCCCTCGATCAGTG +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPRCRCR*PGPRSV
Trigger: CACTGATCGAGGGCCTGGTCAACGACATCTACAACG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTACGGTCAGCTTCACCTaGATGGCCAGTTTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSTVSFT*MASFLV
Trigger: TACCAAGAAACTGGCCATTCAGGTGAAGCTGACCGT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTCCGCCGCAGGATGCTaGCCTCGTTGGCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRSAAGC*PRWPGV
Trigger: CACTCCAGGCCAACGAGGTCAGCATCCTGCGGCGGA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp GCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTAAAGGTCCAGTCATGCCAAGGGACTTaGCTTGGGGTCGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: AARIHFAAFSLVFKLKVQSCQGT*LGVAWR
Trigger: CCTCCATGCGACCCCAAGTCAAGTCCCTTGGCATGA...CTGGACCTTTAACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp CCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACTCATAGATTTGAGCTCAGCCTCCTaGATCGCCAACTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: PDIGGAADACFVHGTLIDLSSAS*IANLAF
Trigger: GAAAGCCAAGTTGGCGATTCAGGAGGCTGAGCTCAA...ATCTATGAGTGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGAGGAAGTCCACTGGTaGGACCACTCCGGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPEEVHW*DHSGLK
Trigger: TTTAAGGCCGGAGTGGTCTCACCAGTGGACTTCCTC...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGCACTGTCCAGATTTTTaGACTCATCCATCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVHCPDF*THPSPR
Trigger: TCTCGGAGATGGATGAGTTCAAAAATCTGGACAGTG...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTACAGCTTCTCTGAGGTaGCCGTCAGAAAGCCAATCT +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSTASLR*PSESQS
Trigger: AGATTGGCTTTCTGACGGTCACCTCAGAGAAGCTGT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGGCCGCGCTTCAGCGATaGCTCCAGTCTGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRAALQR*LQSGCP
Trigger: GGGACACCCAGACTGGAGTCATCGCTGAAGCGCGGC...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp TTTGTACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATGCACAGGTGAAGGGCTaGGTTGTGGTCCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: FVHGTLIDVLGLHAVHRNAQVKG*VVVQPQ
Trigger: CTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGC...ATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGTACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTTGTCGGTGGCTGCTTaGCTCTCCTTGACTTTCATC +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSLSVAA*LSLTFI
Trigger: GATGAAAGTCAAGGAGAGGCAAGCAGCCACCGACAA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCATGTTGTCGGTGGCTaGTTGCCTCTCCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSHVVGG*LPLLDF
Trigger: AAAGTCAAGGAGAGGCAAGCAGCCACCGACAACATG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGGTGCCTGTCCGCGGGTaGGGCTCGTGCTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRVPVRG*GSCWNS
Trigger: GGAATTCCAGCACGAGCCGCACCCGCGGACAGGCAC...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACCCCCGGGAGCTGGGTaGGGATGTCTTCGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERPPGAG*GCLRSR
Trigger: TCGGCTCCGAAGACATCCGCACCCAGCTCCCGGGGG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATTTCTTGGCCCGAATTaGATCCTGGACACATTTTAC +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAFLGPN*ILDTFY
Trigger: GTAAAATGTGTCCAGGATGCAATTCGGGCCAAGAAA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGACGGAGTGGCGGACCTaGAGCAGCTCCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRTEWRT*SSSSSC
Trigger: GCAGCTGGAGGAGCTGCTGCAGGTCCGCCACTCCGT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATCCACCTGGGAAGCCGTaGTCTGCAGCTTCATCAGGC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYPPGKP*SAASSG
Trigger: GCCTGATGAAGCTGCAGAGCACGGCTTCCCAGGTGG...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp GCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTAAAGGTCCAGCCTTCTCGGCCTCGATaGCGACCACCTGGATCAGTT +
Preference number: 4 (lower is better)
Translates to: AARIHFAAFSLVFKLKVQPSRPR*RPPGSV
Trigger: AACTGATCCAGGTGGTCGGCATCGAGGCCGAGAAGG...CTGGACCTTTAACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACAGAGCCTCCTGGGCTaGCAGCAGGGCCGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREQSLLG*QQGRFC
Trigger: GCAGAACCGGCCCTGCTGGCAGCCCAGGAGGCTCTG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACAGAGCCTCCTGGGCTaGCAGCAGGGCCGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERQSLLG*QQGRFC
Trigger: GCAGAACCGGCCCTGCTGGCAGCCCAGGAGGCTCTG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp GCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTAAAGGTCCAGTGTCCTTGGGGATCTTaGCCCCAGGTGCGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: AARIHFAAFSLVFKLKVQCPWGS*PQVRSE
Trigger: TTCTGACCGCACCTGGGGGCAAGATCCCCAAGGACA...CTGGACCTTTAACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp CCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACTCATAGATCAGGCCTCAGGGATGTaGTCCTTGTCGAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: PDIGGAADACFVHGTLIDQASGM*SLSNFF
Trigger: GAAGAAGTTCGACAAGGAGCACATCCCTGAGGCCTG...ATCTATGAGTGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCTGAAACGTAACTTGTaGCAGGAAAATGAGTTTGTC +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGLKRNL*QENEFV
Trigger: GACAAACTCATTTTCCTGGCACAAGTTACGTTTCAG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp GCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTAAAGGTCCAGCCAGTGTCCTTTCTCTaGAGCCACGTCCAGGGCGTT +
Preference number: 4 (lower is better)
Translates to: AARIHFAAFSLVFKLKVQPVSFL*SHVQGV
Trigger: AACGCCCTGGACGTGGCTGCAGAGAAAGGACACTGG...CTGGACCTTTAACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGGGGGTCTTTTCCGCTaGCTTTGCCATGATCTCAGC +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPGGLFR*LCHDLS
Trigger: GCTGAGATCATGGCAAAGGCAGCGGAAAAGACCCCC...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAAGTGGCAGTCCTaGTCCACGCCCGCCACCCAC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYLKWQS*STPATH
Trigger: GTGGGTGGCGGGCGTGGACCAGGACTGCCACTTTAA...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCAAGTGGATCTCCTCTaGCATCTCCTCCCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPQVDLL*HLLPVG
Trigger: ACCTACGGGGAGGAGATGCCAGAGGAGATCCACTTG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGAATGGCCAGTTTCTTaGTATTTGCCCAGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSEWPVS*YLPSAP
Trigger: CGGAGCACTGGGCAAATACCAAGAAACTGGCCATTC...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGCGGCTCTGGAAACGGTaGCTGGGGTGGCCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRRLWKR*LGWPSS
Trigger: TGAGGACGGCCACCCCAGCCACCGTTTCCAGAGCCG...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTTGCGGATGGTTTCCGTaGTGTGGACCAAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPCGWFP*CGPKRP
Trigger: AGGCCTCTTTGGTCCACACCACGGAAACCATCCGCA...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCGAAAATAAGAGTCCCTaGAAAATATTGGAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGENKSP*KILERS
Trigger: GGACCTCTCCAATATTTTCCAGGGACTCTTATTTTC...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTACCACCTGGATCAGTTaGTCTGCGCTCTCATTCTTC +
Preference number: 4 (lower is better)
Translates to: QRHGCQDPLRCLLFGLQVTTWIS*SALSFF
Trigger: GAAGAATGAGAGCGCAGACCAACTGATCCAGGTGGT...AACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp ACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATGGCCTAGATCACCCTGTTCGTaGCATCGGCCTCTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: TRDTHRCSWSPCGPQEWPRSPCS*HRPLAD
Trigger: GTCAGCAAGAGGCCGATGCCACGAACAGGGTGATCT...AGGCCATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp GCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTAAAGGTCCAGTTGATTCCTTGGAGCTaGGCGTCCACGATCAGCGGC +
Preference number: 4 (lower is better)
Translates to: AARIHFAAFSLVFKLKVQLIPWS*ASTISG
Trigger: GCCGCTGATCGTGGACGCCCAGCTCCAAGGAATCAA...CTGGACCTTTAACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp GCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTAAAGGTCCAGGGATCAGGCGGAACTTaGGGTGGTACTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: AARIHFAAFSLVFKLKVQGSGGT*GGTPPP
Trigger: AGGAGGTGGAGTACCACCCCAAGTTCCGCCTGATCC...CTGGACCTTTAACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGCTGCTTCACCTCGTTaGCAGGGGTGGTCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYAASPR*QGWSSG
Trigger: TCCAGAGGACCACCCCTGCCAACGAGGTGAAGCAGC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp TTTGTACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATCCAGCCACACGGTGGTaGGCAGGGCAAAGTCTGTCG +
Preference number: 4 (lower is better)
Translates to: FVHGTLIDVLGLHAVHRNPATRW*AGQSLS
Trigger: CGACAGACTTTGCCCTGCCCACCACCGTGTGGCTGG...ATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGTACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTTTCAAAGAACTCTGTaGACAGGGCCACGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSFQRTL*TGPRSP
Trigger: AGGAGAACGTGGCCCTGTTCACAGAGTTCTTTGAAA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACCACGGGTGTGGGGCTaGTGTCGCCGTAAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREPRVWG*CRRKGA
Trigger: GGCTCCTTTACGGCGACATCAGCCCCACACCCGTGG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCCTCCCTCATCTCTATaGGGTCTGTGTTATCTTCCA +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSPPSSL*GLCYLP
Trigger: TGGAAGATAACACAGACCTCATAGAGATGAGGGAGG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTTTCTGGCGACTTTCATaGAGGCTTCCAGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPFWRLS*RLPGQP
Trigger: TGGCTGACCTGGAAGCCTTCATGAAAGTCGCCAGAA...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATCAAACCAGATGGAGATaGCGGAGTCCGCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYQTRWR*RSPPWT
Trigger: TGTCCACGGCGGACTCCGTCATCTCCATCTGGTTTG...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGGCTGGGCCTGCCAGGTaGAGGCCTGAGAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRAGPAR*RPENSP
Trigger: TGGAGAGTTCTCAGGCCTTCACCTGGCAGGCCCAGC...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGGCACGGTCTTCTCCGTaGGCAGGCACTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRARSSP*AGTPAG
Trigger: ACCTGCTGGAGTGCCTGCTCACGGAGAAGACCGTGC...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAACACGTCAAGCCCGCTaGTGTACGCTGCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERTRQAR*CTLPGG
Trigger: CCCGCCTGGCAGCGTACATCAGCGGGCTTGACGTGT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTTTCTTGAGGGTGATCTaGAACACGTCAAGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPFLRVI*NTSSPL
Trigger: CAGCGGGCTTGACGTGTTTCAGATCACCCTCAAGAA...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp ACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTCTGCGCACTTTTTCGATaGAGAACTTCCAACATGTTT +
Preference number: 4 (lower is better)
Translates to: TGMAGVSSFSRASAMTPVCALFR*RTSNMF
Trigger: AAACATGTTGGAAGTTCTTCATCGAAAAAGTGCGCA...GACTGGAGTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATAGAAGCGGACGATGTTaGTGCACCAGGAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYRSGRC*CTRSTG
Trigger: GCCTGTGCTCCTGGTGCATCAACATCGTCCGCTTCT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCTTGTGCCAGGAAAATaGGTTTGTCCCTCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSLVPGK*VCPSRR
Trigger: TCTTCGAGAGGGACAAACTCATTTTCCTGGCACAAG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTCTCCGAGAGGGCCTTaGTCCCGCCCCAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRSPRGP*SRPSLD
Trigger: ATCAAGGCTGGGGCGGGATCAAGGCCCTCTCGGAGA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGGATATTCTGCAGAATaGCCCAGTGTCCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSGYSAE*PSVLSL
Trigger: CAGAGAAAGGACACTGGGTCATTCTGCAGAATATCC...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp ACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATGGCCTCGAAGAGCATGCACTTaGACTCCATCTCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: TRDTHRCSWSPCGPQEWPRRACT*TPSPWC
Trigger: GCACCAAGGAGATGGAGTTCAAGTGCATGCTCTTCG...AGGCCATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp CAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTTGTGGCCGCCATACATaGTTTCACCAAAAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: QRHGCQDPLRCLLFGLQVCGRHT*FHQKGS
Trigger: GCTACCTTTTTGGTGAAATCATGTATGGCGGCCACA...AACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTCACAGGTGCACAGGTaGAGGGCTGAGTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYSQVHR*RAELWS
Trigger: GGACCACAACTCAGCCCTTCACCTGTGCACCTGTGA...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTCCCTGAACTCATGTTaGTTGAGCTCGAATTGCTGG +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSSLNSC*LSSNCW
Trigger: CCAGCAATTCGAGCTCAAGCAACATGAGTTCAGGGA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCCTCCACGGGGTCATTaGCATTGGAGAGAATGTCCA +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPPPRGH*HWRECP
Trigger: TGGACATTCTCTCCAATGGCAATGACCCCGTGGAGG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAAGCTCCACGATGCTCTaGTTGATGATCTTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEASSTML*LMIFSK
Trigger: TTTTGAAAAGATCATCAAGCAGAGCATCGTGGAGCT...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAGGCTCTGTTTGCCACTaGCGCCCACCCCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERGSVCH*RPPPPA
Trigger: TGCTGGTGGGGGTGGGCGGCAGTGGCAAACAGAGCC...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp GAAGATGACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACTGGTACAGTTTGATCTaGTCCAGAAAGGTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: EDDRHGRGQLFQPRFSDDWYSLI*SRKVLG
Trigger: ACCCAAAACCTTTCTGGAGCAGATCAAACTGTACCA...GTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGTCATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGATCTTGCCCCCAGGTaGGGTCAGAATCATGACGGC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYDLAPR*GQNHDG
Trigger: GCCGTCATGATTCTGACCGCACCTGGGGGCAAGATC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTACCATGCACAGCTTCTaGAGGGCCGTCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPTMHSF*RAVLFF
Trigger: GAAGAACAAGACGGCCCTGCAGAAGCTGTGCATGGT...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTACTCCATCTCCTTGGTaGACATCTCCAGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPTPSPW*TSPGCP
Trigger: AGGACACCCTGGAGATGTGCACCAAGGAGATGGAGT...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp GCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTAAAGGTCCAGGGGGGTCTTTTCCGCTaGCTTTGCCATGATCTCAGC +
Preference number: 4 (lower is better)
Translates to: AARIHFAAFSLVFKLKVQGGLFR*LCHDLS
Trigger: GCTGAGATCATGGCAAAGGCAGCGGAAAAGACCCCC...CTGGACCTTTAACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp AGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACTCATAGATGTTGTTCTTGGTCTCCATaGGGTCCACAGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: RHRWGRGCVFCTRDTHRCCSWSP*GPQEWP
Trigger: AGGCCATTCCTGTGGACCGCATGGAGACCAAGAACA...ACATCTATGAGTGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTAGAATAAGTCACAGGTaGACAGGTGAAGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSRISHR*TGEGLS
Trigger: ACTCAGCCCTTCACCTGTGCACCTGTGACTTATTCT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGCAGGCCTCGAGTTCCTaGAAGGACACACGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRQASSS*KDTRAA
Trigger: GGCGGCTCGTGTGTCCTTGCAGGAACTCGAGGCCTG...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTCTTCCGAGACCACCTaGGGCCATCCAGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYSSETT*GHPAMF
Trigger: GAACATGGCTGGATGGCCCCAGGTGGTCTCGGAAGA...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTAACGTTTTGCAGGGCTaGCCAGTAGCAGCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPNVLQG*PVAAFG
Trigger: GCCAAAAGCTGCTACTGGCCAGCCCTGCAAAACGTT...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTAGTTCCTCAATGGTCTaGATGCGCTGGAAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSSSSMV*MRWKKE
Trigger: TTCCTTCTTCCAGCGCATCCAGACCATTGAGGAACT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCTTGGCAAAAGATCGTaGCCAGCCTCCTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPLGKRS*PASYPG
Trigger: ACCTGGATAGGAGGCTGGCCACGATCTTTTGCCAAG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTATCTTTCCACTTGGTaGTCTTCCAGTCCTCGATGC +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSYLSTW*SSSPRC
Trigger: GCATCGAGGACTGGAAGACCACCAAGTGGAAAGATA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAGAGTCCCCCGGGAGCTaGGTGCGGATGTCTTCGGAG +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERESPGS*VRMSSE
Trigger: CTCCGAAGACATCCGCACCCAGCTCCCGGGGGACTC...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGGGTCACCACGGCCTCTaGGATTTCGTGCCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRGHHGL*DFVPEG
Trigger: ACCCTCCGGCACGAAATCCCAGAGGCCGTGGTGACC...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGAGAGGATGCCGGCTCTaGAAACGGTGGCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRRGCRL*KRWLGW
Trigger: CCACCCCAGCCACCGTTTCCAGAGCCGGCATCCTCT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATCCATCCCAGGTCGGCTaGGTTGATGTAGAGGATGCC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYPSQVG*VDVEDA
Trigger: GGCATCCTCTACATCAACCCAGCCGACCTGGGATGG...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGGCTGGTCCTGGAACATaGCGCCACCGAAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRAGPGT*RHRRPR
Trigger: TCTGGGCCTTCGGTGGCGCCATGTTCCAGGACCAGC...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTCCACAAGCTGGTCCTaGAACATGGCGCCACCGAAG +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYSTSWS*NMAPPK
Trigger: CTTCGGTGGCGCCATGTTCCAGGACCAGCTTGTGGA...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTACCTTGACTTCTTCCTaGTCAGCAATGGCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSTLTSS*SAMAFS
Trigger: AGAGAAGGCCATTGCTGACCAGGAAGAAGTCAAGGT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATCGGTGTTGCCCAGGATaGTGGCATTCTCGGTGGACA +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYRCCPG*WHSRWT
Trigger: TGTCCACCGAGAATGCCACCATCCTGGGCAACACCG...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTGAAATCCAGCTCCACTaGGTTCAGCTCCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: QRHGCQDPLRCLLFGLQVEIQLH*VQLLLH
Trigger: ATGAAGAAGGAGCTGAACCCAGTGGAGCTGGATTTC...AACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGAACGGCGCATTTCGTTaGTCAGGATGTTCATTCTTT +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVNGAFR*SGCSFF
Trigger: AAAGAATGAACATCCTGACCAACGAAATGCGCCGTT...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGGCGATGACTCCAGTCTaGGTGTCCCAGCGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRAMTPV*VSQRAP
Trigger: AGGGGCTCGCTGGGACACCCAGACTGGAGTCATCGC...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACAGCCCCAGGGAGTGTaGGCTGTGAGGCAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREQPQGV*AVRQER
Trigger: TCGCTCCTGCCTCACAGCCCACACTCCCTGGGGCTG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGCAAGGTTTTGCCTTTaGTCTTGCCACTCATCACAA +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSARFCL*SCHSSQ
Trigger: TTGTGATGAGTGGCAAGATCAAAGGCAAAACCTTGC...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGGTGGGACCAGTCGATaGTGGTGGTTTCAATGGCGT +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYGGTSR*WWFQWR
Trigger: ACGCCATTGAAACCACCATCATCGACTGGTCCCACC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGAAATTCAAATACTTaGCTTCTCTCAGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVGNSNT*LLSELP
Trigger: TGGCAGTTCTGAGAGAAGTCAAGTATTTGAATTTCC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCTGCGTAGCGCTTGTTaGGGTTGGCAATTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPLRSAC*GWQFFH
Trigger: ATGGAAGAATTGCCAACCTCAACAAGCGCTACGCAG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTGGACAGCGCCTCCATaGTGCCTTCCATGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRWTAPP*CLPWRR
Trigger: TCTCCGCCATGGAAGGCATCATGGAGGCGCTGTCCA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGCCCCGATCAGTCCCATaGATACGGGCAGGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRPRSVP*IRAGRL
Trigger: CAGACGACCTGCCCGTATTCATGGGACTGATCGGGG...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACCAGGTCGGCTGGGTTaGTGTAGAGGATGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREPGRLG*CRGCRL
Trigger: GAGCCGGCATCCTCTACATCAACCCAGCCGACCTGG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGTCGCATGGAGGAGATaGTGTTCTCCACCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYVAWRR*CSPPRP
Trigger: AGGACGAGGTGGAGAACATCATCTCCTCCATGCGAC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGGTTCTGGTACAGTTTaGTCTGCTCCAGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSGSGTV*SAPERF
Trigger: AAACCTTTCTGGAGCAGATCAAACTGTACCAGAACC...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp AGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACTCATAGATGTTCTCATTCTTCTGCTTaGGCTCAGCCTCCTGAATCG +
Preference number: 4 (lower is better)
Translates to: RHRWGRGCVFCTRDTHRCSHSSA*AQPPES
Trigger: CGATTCAGGAGGCTGAGCTCAAGCAGAAGAATGAGA...ACATCTATGAGTGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGATCCAGGCCATTCGTaGTCGGGATGGGGACCTTTA +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYDPGHS*SGWGPL
Trigger: TAAAGGTCCCCATCCCGATCACGAATGGCCTGGATC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACCAGGGTGTCCTGGGTaGACAGGTCCAGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREPGCPG*TGPGPC
Trigger: ACAAGGCCCTGGACCTGTTCACCCAGGACACCCTGG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATCTTCCACGTCGGTCGTaGTGGTCAGTTCTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYLPRRS*WSVLPS
Trigger: TGAAGGGAGAACTGACCATCACGACCGACGTGGAAG...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp TTTGTACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATAGCGAGCCCCTTCCATaGAGAGTCCGTACACGTAGG +
Preference number: 4 (lower is better)
Translates to: FVHGTLIDVLGLHAVHRNSEPLP*RVRTRR
Trigger: CCTACGTGTACGGACTCTTCATGGAAGGGGCTCGCT...ATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGTACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAGCACAGGTGAAGGGCTaGGTTGTGGTCCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERAQVKG*VVVQPQ
Trigger: CTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGC...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCCTCAATGGTCTGGATaGGCTGGAAGAAGGAATTTA +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSPQWSG*AGRRNL
Trigger: TAAATTCCTTCTTCCAGCGCATCCAGACCATTGAGG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTTTGACTTTCATCAGGTaGCCCATCACCTCCACAAGC +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPLTFIR*PITSTS
Trigger: GCTTGTGGAGGTGATGGGGCACCTGATGAAAGTCAA...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTGCTTGAGCTCGAATTaGTGGCATTTCCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYCLSSN*WHFRRR
Trigger: CCTGCGGCGGAAATGCCAGCAATTCGAGCTCAAGCA...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAATGCCGGTGGTCCATGTaGTGCCGGATGAGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRECRWSM*CRMRVC
Trigger: GCACACCCTCATCCGGCAGCACATGGACCACCGGCA...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp TTTGTACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATTGGGAAGCCGTGCTCTaGAGCTTCATCAGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: FVHGTLIDVLGLHAVHRNWEAVL*SFIRPF
Trigger: GAACGGCCTGATGAAGCTGCAGAGCACGGCTTCCCA...ATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGTACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAGAAGTAGAGCAGAGATaGCCTCTCCGCAGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLREREVEQR*PLRSRA
Trigger: CGCCCGGCTGCGGAGAGGGCATCTCTGCTCTACTTC...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCTTCCACGAACTTGCTaGCCATCTTTTCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPLPRTC*PSFPPR
Trigger: TCGTGGAGGAAAAGATGGGCAGCAAGTTCGTGGAAG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp TTTGTACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATCCTCATGGCTGCCCGTaGTGTAGTGCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FVHGTLIDVLGLHAVHRNPHGCP*CSAPAS
Trigger: AGAAGCTGGAGCACTACAGCACGGGCAGCCATGAGG...ATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGTACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTCCTGGCCATGGACTaGATGATGGCCGTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYFLAMD*MMAVRN
Trigger: GTTCCTCACGGCCATCATGCAGTCCATGGCCAGGAA...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp GTTAAAGGTCCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACAAGAATAAGTCACAGGTaGACAGGTGAAGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: VKGPDIGGAADACFVHGTRISHR*TGEGLS
Trigger: ACTCAGCCCTTCACCTGTGCACCTGTGACTTATTCT...TGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGGACCTTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCCTCTGGTTCCGATGTaGTTGGTTACAAAGCACCTG +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPPLVPM*LVTKHL
Trigger: CAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGTCAGCACCAGCACCTaGACGTCGGGCTTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYVSTST*TSGFSK
Trigger: CTTTGAAAAGCCCGACGTCCAGGTGCTGGTGCTGAC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCTGTTTAGCTGTTCATaGATGCACTTGAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSLFSCS*MHLRFS
Trigger: GCTGAACCTCAAGTGCATCCATGAACAGCTAAACAG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTATGGTCTGGATGCGCTaGAAGAAGGAATTTATCCTG +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSMVWMR*KKEFIL
Trigger: CAGGATAAATTCCTTCTTCCAGCGCATCCAGACCAT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACAGGGCCACCTGGGCTaGGTAGTCCAGGATCCACTG +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREQGHLG*VVQDPL
Trigger: CAGTGGATCCTGGACTACCCAGCCCAGGTGGCCCTG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAGCACCTGTCAGTGAGTaGGGTGATGACCAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREAPVSE*GDDQPR
Trigger: CCGCGGCTGGTCATCACCCCACTCACTGACAGGTGC...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCACTATGCAATGTTTCCTaGTCTTTTTCGTCAACCATT +
Preference number: 4 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEALCNVS*SFSSTI
Trigger: AATGGTTGACGAAAAAGACCAGGAAACATTGCATAG...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp TTTGTACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATTGCTCCTCGGCCACCTaGGAGTCTGTCATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: FVHGTLIDVLGLHAVHRNCSSAT*ESVIRN
Trigger: GTTCCTGATGACAGACTCCCAGGTGGCCGAGGAGCA...ATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGTACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGCAGCTGGGAACTTTCTaGCTCGTACCCGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRQLGTF*LVPAAR
Trigger: CCGTGCTGCGGGTACGAGCCAGAAAGTTCCCAGCTG...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACGTCCCAGGGCACCTTaGGGTTGGCCTCCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERRPRAP*GWPPGS
Trigger: ACTACCTGGAGGCCAACCCCAAGGTGCCCTGGGACG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp AGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACTCATAGATGTCGAGTCCGTCTCTTTTaGCTGCATTTCCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: RHRWGRGCVFCTRDTHRCRVRLF*LHFQDS
Trigger: ACTGTCCTGGAAATGCAGCCAAAAGAGACGGACTCG...ACATCTATGAGTGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAATCATGCCGGCTGCATTaGGCGTCAGCACCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRESCRLH*ASAPAP
Trigger: AGGTGCTGGTGCTGACGCTCAATGCAGCCGGCATGA...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAATGGCCAGCCGAGGGATaGGCCTGGCTACGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREWPAEG*AWLRCR
Trigger: TCTACAACGTAGCCAGGCTCATCCCTCGGCTGGCCA...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGAGAGGTCGCATTCCTaGTCAAAAACCATGTACTCG +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPERSHS*SKTMYS
Trigger: CGAGTACATGGTTTTTGATCAGGAATGCGACCTCTC...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGCGTTGCTGGCCAGGGTaGGGACCTTGTTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRRCWPG*GPCCHP
Trigger: TGGATGACAACAAGGTCCTCACCCTGGCCAGCAACG...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAGCCTGGAGTCGATGGTaGAGGATCCGGAAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERAWSRW*RIRKWG
Trigger: ACCCCACTTCCGGATCCTTCACCATCGACTCCAGGC...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTCATGCCAAGGGACTTaGCTTGGGGTCGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRSCQGT*LGVAWR
Trigger: CCTCCATGCGACCCCAAGTCAAGTCCCTTGGCATGA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACCCTGGACATCTCGTTaGCGGTGGTGTGCACGTAGG +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREPWTSR*RWCARR
Trigger: CCTACGTGCACACCACCGTCAACGAGATGTCCAGGG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTGAGCTCAGCCTCCTaGATCGCCAACTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYLSSAS*IANLAF
Trigger: GAAAGCCAAGTTGGCGATTCAGGAGGCTGAGCTCAA...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACCACCTTGCCCATCATaGTCTTGGCCGCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREPPCPS*SWPPSS
Trigger: GCTGGAAGGCGGCCAAGATCATGATGGGCAAGGTGG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCTTGTGCCAGGAAAATaGGTTTGTCCCTCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPLVPGK*VCPSRR
Trigger: TCTTCGAGAGGGACAAACTCATTTTCCTGGCACAAG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAAGGGAGTGTGGGCTGTaGGGCAGGAGCGAGCTAAAC +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRERECGL*GRSELN
Trigger: GTTTAGCTCGCTCCTGCCTCACAGCCCACACTCCCT...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGCGCAGAATCAGCGGCTaGCCCAGGTTAAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRRRISG*PRLKWQ
Trigger: CTGCCACTTTAACCTGGGGCAGCCGCTGATTCTGCG...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTTTCTTCATAAACTCCTaGAGGTTGTCCGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPFFINS*RLSVQR
Trigger: CCTCTGGACGGACAACCTGCAGGAGTTTATGAAGAA...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAGTTGGCCTGGAGTGGTaGCACGGTCAGCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREVGLEW*HGQLHL
Trigger: CAGGTGAAGCTGACCGTGGCACCACTCCAGGCCAAC...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGCTGGAATTCCATCATaGTCCAGGTACTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYAGIPS*SRYCPG
Trigger: CCCTGGACAGTACCTGGAGCATGATGGAATTCCAGC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTGTAGAGGCCGGGTTTaGTGGTGGCTTCCACCACGT +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRCRGRV*WWLPPR
Trigger: ACGTGGTGGAAGCCACCAGCAAACCCGGCCTCTACA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAACACCAGCCTCATGGTaGGGTTCAGGGGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERTPASW*GSGGSA
Trigger: AGCGGATCCCCCTGAACCGCACCATGAGGCTGGTGT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACCACCTGGGAAGCCGTaGTCTGCAGCTTCATCAGGC +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERPPGKP*SAASSG
Trigger: GCCTGATGAAGCTGCAGAGCACGGCTTCCCAGGTGG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGCCTTCTCGGCCTCGATaGCGACCACCTGGATCAGTT +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRPSRPR*RPPGSV
Trigger: AACTGATCCAGGTGGTCGGCATCGAGGCCGAGAAGG...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGCAGCAGGGCCGGTTCTaGTTTGGCCAGGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRQQGRF*FGQVCF
Trigger: GAAACAGACCTGGCCAAAGCAGAACCGGCCCTGCTG...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp AGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACTCATAGATGTAGACTTGGTGAGGTTTaGCTTCAGCTGTTCCAGATC +
Preference number: 4 (lower is better)
Translates to: RHRWGRGCVFCTRDTHRCRLGEV*LQLFQI
Trigger: GATCTGGAACAGCTGAAGGCAAACCTCACCAAGTCT...ACATCTATGAGTGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp GCAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTCTGAAACGTAACTTGTaGCAGGAAAATGAGTTTGTC +
Preference number: 4 (lower is better)
Translates to: AAPRLPGSTSLPSLWSSSLKRNL*QENEFV
Trigger: GACAAACTCATTTTCCTGGCACAAGTTACGTTTCAG...ACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAAACTCGAACTCCACTTaGGGCAGGGGGTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERNSNST*GRGCSP
Trigger: TGGGCTGCACCCCCTGCCCCAAGTGGAGTTCGAGTT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATCTCTCAAAGGAATCCTaGTACTCCTCGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYLSKES*YSSASF
Trigger: GAAGGAGGCCGAGGAGTACCAGGATTCCTTTGAGAG...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAGGGTGGGCGGTGTCTTaGGGATGGTGTCATCTGTCC +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREGWAVS*GWCHLS
Trigger: GGACAGATGACACCATCCCCAAGACACCGCCCACCC...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAATGAGCTGCTGCCAGTaGCGTTCCCGAATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERMSCCQ*RSRMAG
Trigger: CCCTGCCATTCGGGAACGCCACTGGCAGCAGCTCAT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAACGATGAACACGGAGTaGCGGACCTGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRETMNTE*RTCSSS
Trigger: GGAGCTGCTGCAGGTCCGCCACTCCGTGTTCATCGT...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATAGAGGATCATCAGGTTaGCCTTCTCCGACTGCACCT +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYRGSSG*PSPTAP
Trigger: AGGTGCAGTCGGAGAAGGCCAACCTGATGATCCTCT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATATGGTTTCCGTGGTGTaGACCAAAGAGGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYMVSVV*TKEACS
Trigger: ACTGCAGGCCTCTTTGGTCCACACCACGGAAACCAT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAGAGCTTCTTAGTGCCTaGCGGCCCGTAGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREELLSA*RPVVPP
Trigger: GGGAGGAACTACGGGCCGCCAGGCACTAAGAAGCTC...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAGCCGCGGCCACCAGCTaGCTGCTTATCCTCTGGATA +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERAAATS*LLILWI
Trigger: TATCCAGAGGATAAGCAGCCAGCTGGTGGCCGCGGC...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGCAGTTGACCACAGCTaGGAACTTTCTGGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYAVDHS*ELSGSY
Trigger: GTACGAGCCAGAAAGTTCCCAGCTGTGGTCAACTGC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp AGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACTCATAGATGTCCAGCCTCTCGATTTTaGCAACAAGTTCCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RHRWGRGCVFCTRDTHRCPASRF*QQVPFS
Trigger: AGAGAACGGAACTTGTTGCCAAAATCGAGAGGCTGG...ACATCTATGAGTGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTCGATGCCGACCACCTaGATCAGTTGGTCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRSMPTT*ISWSAL
Trigger: GAGCGCAGACCAACTGATCCAGGTGGTCGGCATCGA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATATCCACTTGATTCCTTaGAGCTGGGCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYIHLIP*SWASTI
Trigger: GATCGTGGACGCCCAGCTCCAAGGAATCAAGTGGAT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAGATCTGGGCGCTCTTTaGCCACCACAGCGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREDLGAL*PPQRPR
Trigger: TCTTGGCCGCTGTGGTGGCCAAAGAGCGCCCAGATC...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGCAGCTGTTCCAGATCTaGGCGCTCTTTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRQLFQI*ALFGHH
Trigger: GTGGTGGCCAAAGAGCGCCCAGATCTGGAACAGCTG...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGGGTGGTCCTCTGGATaGCTTTCTCAAACACCACGT +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYGWSSG*LSQTPR
Trigger: ACGTGGTGTTTGAGAAAGCCATCCAGAGGACCACCC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAATCTCCAGGGTGTCCTaGGTGAACAGGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREISRVS*VNRSRA
Trigger: GGCCCTGGACCTGTTCACCCAGGACACCCTGGAGAT...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGAGGTCCAGACATAGGTaGGGCCGCGGATGCGTGTTT +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRRSRHR*GRGCVF
Trigger: AAACACGCATCCGCGGCCCCACCTATGTCTGGACCT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGAGGTGGGGAGCATCGTaGAGTCGGCTTGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRRWGAS*SRLVPS
Trigger: AGATGGAACAAGCCGACTTCACGATGCTCCCCACCT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTCTGCTCGGAGCAGTTaGAGACGTAGACCATGGTGC +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRSARSS*RRRPWC
Trigger: GCACCATGGTCTACGTCTTCAACTGCTCCGAGCAGA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAAGGGATTTGAGGACCTaGGATTTGCCGCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERRDLRT*DLPLPA
Trigger: TGCGGGCAGCGGCAAATCTCAGGTCCTCAAATCCCT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTGTCTCCGTCAAGGATaGTCCACTTGGGGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRCLRQG*STWGRH
Trigger: ATGACGGCCCCAAGTGGATCATCCTTGACGGAGACA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTGCGCACTTTTTCGATaGAGAACTTCCAACATGTTT +
Preference number: 4 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSCALFR*RTSNMF
Trigger: AAACATGTTGGAAGTTCTTCATCGAAAAAGTGCGCA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp ACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATGGCCTGGTTCTGGTACAGTTTaGTCTGCTCCAGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: TRDTHRCSWSPCGPQEWPGSGTV*SAPERF
Trigger: AAACCTTTCTGGAGCAGATCAAACTGTACCAGAACC...AGGCCATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAACACGAAGGCAGAGATaGGCAGGACGTCCCCACACA +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERTRRQR*AGRPHT
Trigger: TGTGTGGGGACGTCCTGCTCATCTCTGCCTTCGTGT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAGCGGAACAGCTTCTCTaGGGTGACCGTCAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREAEQLL*GDRQKA
Trigger: GGCTTTCTGACGGTCACCTCAGAGAAGCTGTTCCGC...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACCAGGTTCAGCTCCTTaGGCGAACGGCGCATTTCGT +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREPGSAP*ANGAFR
Trigger: ACGAAATGCGCCGTTCGCTCAAGGAGCTGAACCTGG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGACGTGGTTGCTCAGGTaGCGCTTGAACATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRTWLLR*RLNMKP
Trigger: GGGCTTCATGTTCAAGCGGCACCTGAGCAACCACGT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTGTCTGTCATACCAGTaGCGGTGGTCCATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRCLSYQ*RWSMCC
Trigger: GCAGCACATGGACCACCGGCACTGGTATGACAGACA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATGGGAAGCCGTGCTCTaGAGCTTCATCAGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERWEAVL*SFIRPF
Trigger: GAACGGCCTGATGAAGCTGCAGAGCACGGCTTCCCA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACAGCAGGGCCGGTTCTaGTTTGGCCAGGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERQQGRF*FGQVCF
Trigger: GAAACAGACCTGGCCAAAGCAGAACCGGCCCTGCTG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAGATCTTGCCCCCAGGTaGGGTCAGAATCATGACGGC +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERDLAPR*GQNHDG
Trigger: GCCGTCATGATTCTGACCGCACCTGGGGGCAAGATC...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAATGCCTCTGCCAGCTCTaGATTAGCCTCCTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRECLCQL*ISLLQC
Trigger: GCACTGGAGGAGGCTAATGCAGAGCTGGCAGAGGCA...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGACCACCTCTTGTCCCTaGCCCAGGGACACATTATGG +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRTTSCP*PRDTLW
Trigger: CCATAATGTGTCCCTGGGGCAGGGACAAGAGGTGGT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAGGTAGTCCTCATGGCTaGCCGTGCTGTAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREGSPHG*PCCSAP
Trigger: TGGAGCACTACAGCACGGGCAGCCATGAGGACTACC...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAGAGCTGCTTGTAGTCTaGGACGGGGACCTCGAACAG +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREELLVV*DGDLEQ
Trigger: CTGTTCGAGGTCCCCGTCCCAGACTACAAGCAGCTC...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATAGGTACAGAATCGTTTaGATCACCGTGATCTCCGGC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYRYRIV*ITVISG
Trigger: GCCGGAGATCACGGTGATCCAAACGATTCTGTACCT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGGCGGACGAGGTCCAGTaGGGTTTTCAGAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRADEVQ*GFQNFC
Trigger: GCAGAAGTTCTGAAAACCCCACTGGACCTCGTCCGC...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp TTTGTACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATGCAGTTGACCACAGCTaGGAACTTTCTGGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: FVHGTLIDVLGLHAVHRNAVDHS*ELSGSY
Trigger: GTACGAGCCAGAAAGTTCCCAGCTGTGGTCAACTGC...ATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGTACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACACAGCGTGACCCCCTaGCTCCTGAAGTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERHSVTP*LLKFST
Trigger: TGTGGAGAACTTCAGGAGCCAGGGGGTCACGCTGTG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGAGGCGGAACTTGGGGTaGTACTCCACCTCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRRRNLG*YSTSLS
Trigger: TGACAAGGAGGTGGAGTACCACCCCAAGTTCCGCCT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAGGATCAGGCGGAACTTaGGGTGGTACTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREGSGGT*GGTPPP
Trigger: AGGAGGTGGAGTACCACCCCAAGTTCCGCCTGATCC...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACAGCTGTTCCAGATCTaGGCGCTCTTTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREQLFQI*ALFGHH
Trigger: GTGGTGGCCAAAGAGCGCCCAGATCTGGAACAGCTG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAATCCACTTGTCCGGCTTaGACTTCAGGACGATGGAGG +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRESTCPA*TSGRWR
Trigger: CCTCCATCGTCCTGAAGTTCAAGCCGGACAAGTGGA...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATCCATCTGCTCAACGTTaGTATCTTTCCACTTGGTGG +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYPSAQR*YLSTWW
Trigger: CCACCAAGTGGAAAGATATCAACGTTGAGCAGATGG...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTGGTGCAGATGGTCATaGTCTTCATCCTGTCGCCAG +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRWCRWS*SSSCRQ
Trigger: CTGGCGACAGGATGAAGATCATGACCATCTGCACCA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAAGGTCGTGTAGAAGTTaGAGGGCACAGCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRERSCRS*RAQPAP
Trigger: TGGTGCAGGCTGTGCCCTTCAACTTCTACACGACCT...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGCTTGTAGTGTGGGTTaGAGTACTTGGTGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYACSVG*STWCVG
Trigger: TCCTACACACCAAGTACTTCAACCCACACTACAAGC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACTCATAGATATCTTAAATTCGTTTTaGGACTTGGTGAGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: PDIGGAADACFVHGTLIDILNSF*DLVRFA
Trigger: GGCAAACCTCACCAAGTCTCAAAACGAATTTAAGAT...ATCTATGAGTGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGACCGGGTGTTCGACGTaGTTCAGGTGTTTCATGGAC +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRTGCST*FRCFMD
Trigger: GTCCATGAAACACCTGAAGCACGTCGAACACCCGGT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGAGCATCCCTGACTGCTaGGTAGCGCTTGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRSIPDC*VALVEV
Trigger: AACCTCAACAAGCGCTACGCAGCAGTCAGGGATGCT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGCAGTTTCTTGGTATTTaGCCAGTGCTCCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRQFLGI*PVLRQL
Trigger: GAGCTGCCGGAGCACTGGGCAAATACCAAGAAACTG...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTTCTTCCAGTCCTCGATaGTGGTATTTACCACAACAA +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPSSSPR*WYLPQQ
Trigger: TTGTTGTGGTAAATACCAGCATCGAGGACTGGAAGA...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAGCCTCTGGGATTTCGTaGCGGAGGGTAGAGCACATT +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREASGIS*RRVEHI
Trigger: AATGTGCTCTACCCTCCGGCACGAAATCCCAGAGGC...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACCAGCCGCGGCGTGTTaGCCAGATACTCATAGGAAT +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERPAAAC*PDTHRN
Trigger: ATTCCTATGAGTATCTGGGCAACACGCCGCGGCTGG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGTTTCACAGGCCTTTTaGTTCTCAGTGACGTTCTTA +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPVSQAF*FSVTFL
Trigger: TAAGAACGTCACTGAGAAGCAAAAGGCCTGTGAAAC...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGGGCCTTCCACGAACTTaGTGCCCATCTTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRGLPRT*CPSFPP
Trigger: TGGAGGAAAAGATGGGCAGCAAGTTCGTGGAAGGCC...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATACCAGGTGGATATTCTaGAGAATGACCCAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYTRWIF*RMTQCP
Trigger: AGGACACTGGGTCATTCTGCAGAATATCCACCTGGT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATCAGGATCCACTTCGCTaGCTTCTCTTTGGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYQDPLR*LLFGLQ
Trigger: TTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTG...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAGCGGTGTCTTGGGGATaGTGTCATCTGTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREAVSWG*CHLSRC
Trigger: ACACCTGGACAGATGACACCATCCCCAAGACACCGC...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTTCAGCTTCACCTGAATaGCCAGTTTCTTGGTATTTG +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPSASPE*PVSWYL
Trigger: CAAATACCAAGAAACTGGCCATTCAGGTGAAGCTGA...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAGGCTATCGAAGAGTTTaGACAGGTGGCGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERGYRRV*TGGGSP
Trigger: AGGTGAGCCGCCACCTGTCCAAACTCTTCGATAGCC...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACCAAGGGACTTGACTTaGGGTCGCATGGAGGAGATG +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREPRDLT*GRMEEM
Trigger: CATCTCCTCCATGCGACCCCAAGTCAAGTCCCTTGG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATGTTGCCCAGGATGGTaGCATTCTCGGTGGACATGC +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERCCPGW*HSRWTC
Trigger: GCATGTCCACCGAGAATGCCACCATCCTGGGCAACA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATCTCTGGCTTGTAGTGTaGGTTGAAGTACTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYLWLVV*VEVLGV
Trigger: CACACCAAGTACTTCAACCCACACTACAAGCCAGAG...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp TTTGTACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATCTGAGCCTGCATCTCTaGCTTGTAGTGTGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: FVHGTLIDVLGLHAVHRNLSLHL*LVVWVE
Trigger: TTCAACCCACACTACAAGCCAGAGATGCAGGCTCAG...ATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGTACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGCTGGCTGTGTGCTTaGTGGTCTCCAGATTCTCCA +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRERWLCA*WSPDSP
Trigger: TGGAGAATCTGGAGACCACCAAGCACACAGCCAGCG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCCCAGGGACACATTATaGAGTTTTCCATTGTCTATG +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPPRDTL*SFPLSM
Trigger: CATAGACAATGGAAAACTCCATAATGTGTCCCTGGG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp TTTGTACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATCCTCTCGGTTTTTCTTaGTCACCTCGACAGACAGAC +
Preference number: 4 (lower is better)
Translates to: FVHGTLIDVLGLHAVHRNPLGFS*SPRQTD
Trigger: GTCTGTCTGTCGAGGTGACCAAGAAAAACCGAGAGG...ATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGTACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATACTCATAGATGTTCTTaGTCTCCATGCGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYTHRCS*SPCGPQ
Trigger: CTGTGGACCGCATGGAGACCAAGAACATCTATGAGT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACCAAGTCCTCCGCAGTaGCTGCACACCCATATATCA +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERPSPPQ*LHTHIS
Trigger: TGATATATGGGTGTGCAGTCACTGCGGAGGACTTGG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTCTCATTCTTCTGCTTaGGCTCAGCCTCCTGAATCG +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRSHSSA*AQPPES
Trigger: CGATTCAGGAGGCTGAGCTCAAGCAGAAGAATGAGA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAAGATGGCCTGCTCGATaGCATCCAGGTAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRERWPAR*HPGSSS
Trigger: AGAAGAGCTACCTGGATGTCATCGAGCAGGCCATCT...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAAGATGGCCTGCTCGATaGCATCCAGGTAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERRWPAR*HPGSSS
Trigger: AGAAGAGCTACCTGGATGTCATCGAGCAGGCCATCT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp TTTGTACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATGCTTGTAGTGTGGGTTaGAGTACTTGGTGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: FVHGTLIDVLGLHAVHRNACSVG*STWCVG
Trigger: TCCTACACACCAAGTACTTCAACCCACACTACAAGC...ATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGTACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR TCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATCACTGTCCAGATTTTTaGACTCATCCATCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYHCPDF*THPSPR
Trigger: TCTCGGAGATGGATGAGTTCAAAAATCTGGACAGTG...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACGAAGAGCATGCACTTaGACTCCATCTCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERRRACT*TPSPWC
Trigger: GCACCAAGGAGATGGAGTTCAAGTGCATGCTCTTCG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAATATGATCATGCCGGCTaGATTGAGCGTCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREYDHAG*IERQHQ
Trigger: CTGGTGCTGACGCTCAATGCAGCCGGCATGATCATA...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGGTGGTTTCAATGGCGTaGAGGAGCAAGTTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRVVSMA*RSKLSS
Trigger: ACTGGACAACTTGCTCCTGCACGCCATTGAAACCAC...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACCTTGTCCACGATGTTaGGGACCTCATCCTCGTAAC +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERPCPRC*GPHPRN
Trigger: GTTACGAGGATGAGGTCCGCAACATCGTGGACAAGG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAGACATCATCAGGTTCTaGAGCTGCACCTGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREDIIRF*SCTWLS
Trigger: GGACAACCAGGTGCAGCTGCAGAACCTGATGATGTC...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGTTGGGTGTTTTCACTaGATCTTCCATCAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYVGCFH*IFHQGL
Trigger: AAGGCCTTGATGGAAGATGCAGTGAAAACACCCAAC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTCAAAAATCGTTCCCTaGGAGGGGAACTTGATAGTC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYSKIVP*EGNLIV
Trigger: GACTATCAAGTTCCCCTCGCAGGGAACGATTTTTGA...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACAGGCCTCAGGGATGTaGTCCTTGTCGAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERQASGM*SLSNFF
Trigger: GAAGAAGTTCGACAAGGAGCACATCCCTGAGGCCTG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACTTCTCTTGTGCCTCTaGCAGCTCTGCATTAGCCTC +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERLLLCL*QLCISL
Trigger: GAGGCTAATGCAGAGCTGGCAGAGGCACAAGAGAAG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGCCTCTGGTTCCGATGTaGTTGGTTACAAAGCACCTG +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRPLVPM*LVTKHL
Trigger: CAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGG...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAATTGAGCTCGAATTGCTaGCATTTCCGCCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRELSSNC*HFRRRM
Trigger: CATCCTGCGGCGGAAATGCCAGCAATTCGAGCTCAA...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTCCAGTCCTCGATGCTaGTATTTACCACAACAACCA +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYSSPRC*YLPQQP
Trigger: TGGTTGTTGTGGTAAATACCAGCATCGAGGACTGGA...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGGGGTCATTGCCATTaGAGAGAATGTCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRERGHCH*RECPGG
Trigger: ACCTCCTGGACATTCTCTCCAATGGCAATGACCCCG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGGTTCCGTTCTCTTCTTaGCCAGCAGGTTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRVPFSS*PAGSGT
Trigger: TGTACCAGAACCTGCTGGCCAAGAAGAGAACGGAAC...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAATTCAAATCATCCACCTaGGAAGCCGTGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREFKSST*EAVLCS
Trigger: GCTGCAGAGCACGGCTTCCCAGGTGGATGATTTGAA...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATCTGTCCCAGGCGGATaGCTTTCAGTTCACTCCTGT +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERSVPGG*LSVHSC
Trigger: ACAGGAGTGAACTGAAAGCCATCCGCCTGGGACAGA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAATTCATGGACAGGACCTaGAACGTAACTTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREFMDRT*NVTCAR
Trigger: CCTGGCACAAGTTACGTTTCAGGTCCTGTCCATGAA...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATTCATGGACAGGACCTaGAACGTAACTTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERFMDRT*NVTCAR
Trigger: CCTGGCACAAGTTACGTTTCAGGTCCTGTCCATGAA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGGGATATTCTGCAGAATaGCCCAGTGTCCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRGYSAE*PSVLSL
Trigger: CAGAGAAAGGACACTGGGTCATTCTGCAGAATATCC...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAACAGCTTCTCTGAGGTaGCCGTCAGAAAGCCAATCT +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRETASLR*PSESQS
Trigger: AGATTGGCTTTCTGACGGTCACCTCAGAGAAGCTGT...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGCCATGTTCTCACTTTaGTTTAACAGAGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYAMFSL*FNREER
Trigger: CCTCTCTTCTCTGTTAAACCAAAGTGAGAACATGGC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATGGTGTTCTCGCACTTaGACACCTCCTCATACAGCT +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERWCSRT*TPPHTA
Trigger: AGCTGTATGAGGAGGTGTCCAAGTGCGAGAACACCA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGAAGGCCTTGAATTCCTaGTTGATGTCGTCAAAGCGC +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRKALNS*LMSSKR
Trigger: GCGCTTTGACGACATCAACCAGGAATTCAAGGCCTT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTGGCTTCCACCACGTTaGGTGTTTTCACTGCATCTT +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRWLPPR*VFSLHL
Trigger: AAGATGCAGTGAAAACACCCAACGTGGTGGAAGCCA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACCATTCCCTGGTCACTaGGTTGATGATGCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERPFPGH*VDDAKE
Trigger: CTCTTTGGCATCATCAACCCAGTGACCAGGGAATGG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAGAGACTCGATCCACATaGGGTCTATGTCTCCGTCAA +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREETRST*GLCLRQ
Trigger: TTGACGGAGACATAGACCCCATGTGGATCGAGTCTC...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGCCAGCCTCTCGATTTTaGCAACAAGTTCCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRPASRF*QQVPFS
Trigger: AGAGAACGGAACTTGTTGCCAAAATCGAGAGGCTGG...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACCTCTCGGTTTTTCTTaGTCACCTCGACAGACAGAC +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERPLGFS*SPRQTD
Trigger: GTCTGTCTGTCGAGGTGACCAAGAAAAACCGAGAGG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACCTTCAGCCCTTCAGTaGCGTTGGTGTAAACGTTTT +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREPSALQ*RWCKRF
Trigger: AAAACGTTTACACCAACGTCACTGAAGGGCTGAAGG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAGAAAGTTTCGTTCTCTaGGAACAGACTCTCCGCACT +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERESFVL*EQTLRT
Trigger: AGTGCGGAGAGTCTGTTCTCAGAGAACGAAACTTTC...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATCAGTGTGTCTGCCCTaGATAGTTCTGCGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERSVCLP*IVLRFL
Trigger: CAGAAAACGCAGAACTATTCAGGGCAGACACACTGA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTGTCGTCAATGTAGATaGCATAATCCTTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRCRQCR*HNPSRA
Trigger: TGCCCTGGAAGGATTATGTCATCTACATTGACGACA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAAACACAGGATCACCTTaGGCTGTCTGCGCACTTTTT +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRENTGSP*AVCALF
Trigger: AAAAAGTGCGCAGACAGCTCAAGGTGATCCTGTGTT...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAAACACAGGATCACCTTaGGCTGTCTGCGCACTTTTT +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERNTGSP*AVCALF
Trigger: AAAAAGTGCGCAGACAGCTCAAGGTGATCCTGTGTT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGTTTTGAGACTTGGTaGGGTTTGCCTTCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRERFETW*GLPSAV
Trigger: AACAGCTGAAGGCAAACCTCACCAAGTCTCAAAACG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR TCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATGTGGCCGCCATACATaGTTTCACCAAAAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERCGRHT*FHQKGS
Trigger: GCTACCTTTTTGGTGAAATCATGTATGGCGGCCACA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACATGTACAGGAGCTTTaGGGAGGACTTGATACAGCT +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREHVQEL*GGLDTA
Trigger: AGCTGTATCAAGTCCTCCGCAAAGCTCCTGTACATG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAGACTTCTCTCAGAACTaGCACCAACGCTTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERDFSQN*HQRFAE
Trigger: TTCAGCAAAGCGTTGGTGGCAGTTCTGAGAGAAGTC...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGGAATCTCTTTCTGTTaGTGGAAATTCAAATACTTG +
Preference number: 4 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPGISFC*WKFKYL
Trigger: CAAGTATTTGAATTTCCAGCAACAGAAAGAGATTCC...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACTGGATCAGTTGGTCTaGGCTCTCATTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRELDQLV*ALILLL
Trigger: AAGCAGAAGAATGAGAGCGCAGACCAACTGATCCAG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAACCAGGTGGATATTCTaGAGAATGACCCAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERTRWIF*RMTQCP
Trigger: AGGACACTGGGTCATTCTGCAGAATATCCACCTGGT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACTTTTCCGCTGCCTTTaGCATGATCTCAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERLFRCL*HDLSHV
Trigger: AACATGGCTGAGATCATGGCAAAGGCAGCGGAAAAG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACAGTCATCAAATCCTTaGCAAAAGATCGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERQSSNP*QKIVAS
Trigger: GCTGGCCACGATCTTTTGCCAAGGATTTGATGACTG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAACTCTCCGCACTGTCTaGAATCTCTTTCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERTLRTV*NLFLLL
Trigger: CAGCAACAGAAAGAGATTCCAGACAGTGCGGAGAGT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACGTTTTCTGCAACCATaGCTTGGATCTTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERRFLQP*LGSSLQ
Trigger: CTGGAGTGAAGATCCAAGCCATGGTTGCAGAAAACG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGATTTTAAATTTCACCTaGGTGGCCTGCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRILNFT*VACMSC
Trigger: GCAGCTCATGCAGGCCACCCAGGTGAAATTTAAAAT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACTCTGGCTTGTAGTGTaGGTTGAAGTACTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRELWLVV*VEVLGV
Trigger: CACACCAAGTACTTCAACCCACACTACAAGCCAGAG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp TTTGTACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATAACGGCGCATTTCGTTaGTCAGGATGTTCATTCTTT +
Preference number: 4 (lower is better)
Translates to: FVHGTLIDVLGLHAVHRNNGAFR*SGCSFF
Trigger: AAAGAATGAACATCCTGACCAACGAAATGCGCCGTT...ATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGTACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR GCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGGCCATGGTGACTCTATaGAATGTTTCCTGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRAMVTL*NVSWSF
Trigger: AAAAGACCAGGAAACATTGCATAGAGTCACCATGGC...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGATTTGCGAATGAACTaGTCAAATTCATCTAAGACC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYDLRMN*SNSSKT
Trigger: GGTCTTAGATGAATTTGACCAGTTCATTCGCAAATC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATAAGACCTCATGTCCTTaGCAAACTTCTTACAATCTA +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYKTSCP*QTSYNL
Trigger: TAGATTGTAAGAAGTTTGCCAAGGACATGAGGTCTT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATATGAGTACGTTCAGCTaGCTAATCTGCTTTTTGTTA +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYMSTFS*LICFLL
Trigger: TAACAAAAAGCAGATTAGCCAGCTGAACGTACTCAT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACAGCGCTCAATAACTTaGCATCAATTGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREQRSIT*HQLLPV
Trigger: AACTGGAAGCAATTGATGTCAAGTTATTGAGCGCTG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAGAAGAAATGTTGCCGTaGTTTTCTGATGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLREREEMLP*FSDAKP
Trigger: TGGCTTTGCATCAGAAAATCACGGCAACATTTCTTC...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACTTCCATGGCGGAGATaGTCTTTTGTTGCTTATTCA +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRELPWRR*SFVAYS
Trigger: TGAATAAGCAACAAAAGAGCATCTCCGCCATGGAAG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAGTTTCACAGGCCTTTTaGTTCTCAGTGACGTTCTTA +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREVSQAF*FSVTFL
Trigger: TAAGAACGTCACTGAGAAGCAAAAGGCCTGTGAAAC...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATAGAAGATATTTGGCTTaGCAAATAAGAGTTCATCAC +
Preference number: 4 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYRRYLA*QIRVHH
Trigger: GTGATGAACTCTTATTTGCCAAGCCAAATATCTTCT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAATGCAGGCCACGTACTaGCAATTATGGATATCTTTT +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREMQATY*QLWISF
Trigger: AAAAGATATCCATAATTGTCAGTACGTGGCCTGCAT...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAATCTTAAATTCGTTTTaGGACTTGGTGAGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERILNSF*DLVRFA
Trigger: GGCAAACCTCACCAAGTCTCAAAACGAATTTAAGAT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CCA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGCTCCTATCCAGGTCTTaGATTTTGATCTCAAAATCA +
Preference number: 4 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRLLSRS*ILISKS
Trigger: TGATTTTGAGATCAAAATCCAAGACCTGGATAGGAG...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR TCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATCAGAGATTTGCGAATaGACTGGTCAAATTCATCTA +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERSEICE*TGQIHL
Trigger: TAGATGAATTTGACCAGTTCATTCGCAAATCTCTGA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACAATCTATGTCCATCTaGTCAACGTTGATATCTTTC +
Preference number: 4 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERQSMSI*STLISF
Trigger: GAAAGATATCAACGTTGAGCAGATGGACATAGATTG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR GCA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACTTCAGAAACTCAATTaGTGTTTTATAGAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRELQKLN*CFIEFL
Trigger: GAGGAACTCTATAAAACAGCAATTGAGTTTCTGAAG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 90 bp GCTGGACCAGGTCTGCCCTCTGAGGGTGGCCCTGGCACTGCCCGATaGCTGTGTGGGCAACAGGCCTGGCTGTGGAGCCCAGATGCAGCC +
Preference number: 5 (lower is better)
Translates to: AGPGLPSEGGPGTAR*LCGQQAWLWSPDAA
Trigger: GGCTGCATCTGGGCTCCACAGCCAGGCCTGTTGCCCACACAGCCATCGGGCAGTGCCAGGGCCACCCTCAGAGGGCAGACCTGGTCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590227.5
CDS-3UTR CAA 90 bp TGGGCTGTGAGGCAGGAGCGAGCTAAACCTGTAGGAGCAGCGCCACGGCTGCCAGCGGCGGCCGTGGACTaGGAGCGGATGAACTCGGGG +
Preference number: 5 (lower is better)
Translates to: WAVRQERAKPVGAAPRLPAAAVD*ERMNSG
Trigger: CCCCGAGTTCATCCGCTCCAAGTCCACGGCCGCCGC...TGGCAGCCGTGGCGCTGCTCCTACAGGTTTAGCTCGCTCCTGCCTCACAGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS TCA 90 bp CGGTGGTGGGCAGGGCAAAGTCTGTCGTCCAGGCCTCGAGTTCCCTaGTGCGGAGCAGCAGGTCTGCGTACCAGGCCGCCAGGCCCATCA +
Preference number: 5 (lower is better)
Translates to: RWWAGQSLSSRPRVP*CGAAGLRTRPPGPS
Trigger: TGATGGGCCTGGCGGCCTGGTACGCAGACCTGCTGCTCCGCATCAGGGAACTCGAGGCCTGGACGACAGACTTTGCCCTGCCCACCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000590227.5
ENST00000591647.1
CDS-3UTR CAA 90 bp ACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTCACGGCGGCGGTGACGTaGACCACAGCATCCGGCGGG +
Preference number: 5 (lower is better)
Translates to: TGMAGVSSFSRASAMTPVTAAVT*TTASGG
Trigger: CCCGCCGGATGCTGTGGTCAACGTCACCGCCGCCGT...GACTGGAGTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAGCGGCGGCCGTGGACTaGGAGCGGATGAACTCGGGG +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAAAAVD*ERMNSG
Trigger: CCCCGAGTTCATCCGCTCCAAGTCCACGGCCGCCGC...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS TCA 90 bp TCTTGGGCGCCACGTCGCAGTAGACCTCGTAGAAGCGGACGATGTTaGTGCACCAGGAGCACAGGCCGGCGGCGGCCGTGGACTTGGAGC +
Preference number: 5 (lower is better)
Translates to: SWAPRRSRPRRSGRC*CTRSTGRRRPWTWS
Trigger: GCTCCAAGTCCACGGCCGCCGCCGGCCTGTGCTCCTGGTGCATCAACATCGTCCGCTTCTACGAGGTCTACTGCGACGTGGCGCCCAAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS TCA 90 bp TCTGTCGTCCAGGCCTCGAGTTCCTGCAAGGACACACGAGCCGCCTaGTGCGGAGCAGCAGGTCTGCGTACCAGGCCGCCAGGCCCATCA +
Preference number: 5 (lower is better)
Translates to: SVVQASSSCKDTRAA*CGAAGLRTRPPGPS
Trigger: TGATGGGCCTGGCGGCCTGGTACGCAGACCTGCTGCTCCGCATCAGGCGGCTCGTGTGTCCTTGCAGGAACTCGAGGCCTGGACGACAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS GCA 90 bp CGCTTGAACATGAAGCCCCAGCGCCGGATTGTGCTGAGCAGGGCCTaGTTGAAGGGGCGGCAGTCGCACTGCAGCCAGCCGTGGAACACC +
Preference number: 5 (lower is better)
Translates to: RLNMKPQRRIVLSRA*LKGRQSHCSQPWNT
Trigger: GGTGTTCCACGGCTGGCTGCAGTGCGACTGCCGCCCCTTCAAGCAGGCCCTGCTCAGCACAATCCGGCGCTGGGGCTTCATGTTCAAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCAGCTCCAGGCTCCATTaGAGCTGCCCGGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGSSRLH*SCPATG
Trigger: TCCCGTGGCCGGGCAGCTCAAATGGAGCCTGGAGCT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGCCCATCAGCACCGACTaGCCCGTCCCCGCGTTCCCC +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVPISTD*PVPAFP
Trigger: GGGGAACGCGGGGACGGGCAAGTCGGTGCTGATGGG...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTCCCCTGGGCGCCGAACTaGCGCCTCTCTGCCACCACA +
Preference number: 5 (lower is better)
Translates to: TGMAGVSSFSRASAMTPVPWAPN*RLSATT
Trigger: TGTGGTGGCAGAGAGGCGCAAGTTCGGCGCCCAGGG...GACTGGAGTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS TCA 90 bp CTCCACTTGGGGCAGGGGGTGCAGCCCATCCAGCAGCGCCTGGGCTaGGTCTTTGCTCAGCACATCCCGGATCTGGTGGGACCAGTCGAT +
Preference number: 5 (lower is better)
Translates to: LHLGQGVQPIQQRLG*VFAQHIPDLVGPVD
Trigger: ATCGACTGGTCCCACCAGATCCGGGATGTGCTGAGCAAAGACTCAGCCCAGGCGCTGCTGGATGGGCTGCACCCCCTGCCCCAAGTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 90 bp CTGGGCCCTGTGAGCGCTGAGCGTGGAAGAGGCTCCCACAAAGGCTaGGAGCCCTCTGGAGCATGGAGGCTAAGGACACCAAGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: LGPVSAERGRGSHKG*EPSGAWRLRTPSGS
Trigger: GGAGCCGCTTGGTGTCCTTAGCCTCCATGCTCCAGAGGGCTCTCAGCCTTTGTGGGAGCCTCTTCCACGCTCAGCGCTCACAGGGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592152.1
CDS GCA 90 bp TTGACGTGGATGAGGTTGCTAGCGGCGTCCCGCAGAATCAGCGGCTaGCCCAGGTTAAAGTGGCAGTCCTGGTCCACGCCCGCCACCCAC +
Preference number: 5 (lower is better)
Translates to: LTWMRLLAASRRISG*PRLKWQSWSTPATH
Trigger: GTGGGTGGCGGGCGTGGACCAGGACTGCCACTTTAACCTGGGGCAGCCGCTGATTCTGCGGGACGCCGCTAGCAACCTCATCCACGTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAGGCCACCGCTCGGTGTaGCCCAGGATGGTGGCATTC +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAGHRSV*PRMVAF
Trigger: GAATGCCACCATCCTGGGCAACACCGAGCGGTGGCC...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS TCA 90 bp GATGTCGTTGACCAGGCCCTCGATCAGTGCCAGGAAGCCGCGATCTaGGCCCACCTCCAGGGTCGGGTTGAAGGTCAGCCCATCCTCGTC +
Preference number: 5 (lower is better)
Translates to: DVVDQALDQCQEAAI*AHLQGRVEGQPILV
Trigger: GACGAGGATGGGCTGACCTTCAACCCGACCCTGGAGGTGGGCTCAGATCGCGGCTTCCTGGCACTGATCGAGGGCCTGGTCAACGACATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 90 bp CAAGCTGGTCCTGGAACATGGCGCCACCGAAGGCCCAGAAGCAGGTaGACACGAAGTACAGCTCGTACAGCTCCCTGGGGGAGTCGGGGG +
Preference number: 5 (lower is better)
Translates to: QAGPGTWRHRRPRSR*TRSTARTAPWGSRG
Trigger: CCCCCGACTCCCCCAGGGAGCTGTACGAGCTGTACTTCGTGTTCACCTGCTTCTGGGCCTTCGGTGGCGCCATGTTCCAGGACCAGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS TCA 90 bp ACGGCCTTCACCCGAAGCCTGCAGCTGCCACGTCTGAGGACCTGCTaGCCAGCCTGCGGGCCATACCCCAGTGTTTCTGATACCCAAGCC +
Preference number: 5 (lower is better)
Translates to: TAFTRSLQLPRLRTC*PACGPYPSVSDTQA
Trigger: GGCTTGGGTATCAGAAACACTGGGGTATGGCCCGCAGGCTGGTCAGCAGGTCCTCAGACGTGGCAGCTGCAGGCTTCGGGTGAAGGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592192.2
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCGCCTGGGCTGAGTCTTaGCTCAGCACATCCCGGATC +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGAWAES*LSTSRI
Trigger: GATCCGGGATGTGCTGAGCAAAGACTCAGCCCAGGC...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATCCTCCGCCTGCAGCTaGAGCTCCACGATGCTCTGC +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEASSACS*SSTMLC
Trigger: GCAGAGCATCGTGGAGCTCAAGCTGCAGGCGGAGGA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCACCGGGACAGCTTCTCTaGTGCCTCTGCCAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAPGQLL*CLCQLC
Trigger: GCAGAGCTGGCAGAGGCACAAGAGAAGCTGTCCCGG...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS TCA 90 bp CCCGAATGGCAGGGTTCTGCAGCTCGCTCACGGCACGCAGGGACGTaGTCACGTTTTTCACGGTGTTGTCGAGCCCCACGAAGGCATCCC +
Preference number: 5 (lower is better)
Translates to: PEWQGSAARSRHAGT*SRFSRCCRAPRRHP
Trigger: GGGATGCCTTCGTGGGGCTCGACAACACCGTGAAAAACGTGATCACGTCCCTGCGTGCCGTGAGCGAGCTGCAGAACCCTGCCATTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 90 bp GCCTGCATGAGCTGCTGCCAGTGGCGTTCCCGAATGGCAGGGTTCTaGAGCTCGCTCACGGCACGCAGGGACGTGATCACGTTTTTCACG +
Preference number: 5 (lower is better)
Translates to: ACMSCCQWRSRMAGF*SSLTARRDVITFFT
Trigger: CGTGAAAAACGTGATCACGTCCCTGCGTGCCGTGAGCGAGCTGCAGAACCCTGCCATTCGGGAACGCCACTGGCAGCAGCTCATGCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 90 bp GGCTGTGGTGCGTGGCTGTTATTTGGCCTGTGGAAACGACGGTTTTaGGGGGCTCAGCCTCCGAGAAGAAGCCGCTCCAGGTACTCGCCC +
Preference number: 5 (lower is better)
Translates to: GCGAWLLFGLWKRRF*GAQPPRRSRSRYSP
Trigger: GGGCGAGTACCTGGAGCGGCTTCTTCTCGGAGGCTGAGCCCCGCAAAACCGTCGTTTCCACAGGCCAAATAACAGCCACGCACCACAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587177.1
CDS CCA 90 bp AGCAGGGCCTGCTTGAAGGGGCGGCAGTCGCACTGCAGCCAGCCGTaGAACACCTTGGTGTTCTCGCACTTGGACACCTCCTCATACAGC +
Preference number: 5 (lower is better)
Translates to: SRACLKGRQSHCSQP*NTLVFSHLDTSSYS
Trigger: GCTGTATGAGGAGGTGTCCAAGTGCGAGAACACCAAGGTGTTCCACGGCTGGCTGCAGTGCGACTGCCGCCCCTTCAAGCAGGCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 90 bp GGGGTGGTCCTCTGGATGGCTTTCTCAAACACCACGTTGAAGGCCTaGGGATCCGCCACCGAGAGCCATGGAGGCGTGCAGAGATGGAGC +
Preference number: 5 (lower is better)
Translates to: GVVLWMAFSNTTLKA*GSATESHGGVQRWS
Trigger: GCTCCATCTCTGCACGCCTCCATGGCTCTCGGTGGCGGATCCCCAGGCCTTCAACGTGGTGTTTGAGAAAGCCATCCAGAGGACCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590227.5
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATCGGCGCCTATCAGCTaGCTCCACTTGTCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEASAPIS*LHLSGL
Trigger: CAAGCCGGACAAGTGGAGCAAGCTGATAGGCGCCGA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCATGGTGTCCAGCACCTaGGCAATGAAGGTGGGGAGC +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGMVSST*AMKVGS
Trigger: GCTCCCCACCTTCATTGCCAAGGTGCTGGACACCAT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCTGTTGGTGACGTGGTaGCTCAGGTGCCGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGLLVTW*LRCRLN
Trigger: GTTCAAGCGGCACCTGAGCAACCACGTCACCAACAG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCGCTGCTTGCCTCTCCTaGACTTTCATCAGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGAACLS*TFIRCP
Trigger: GGGGCACCTGATGAAAGTCAAGGAGAGGCAAGCAGC...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGAGGATGCTGACCTCGTaGGCCTGGAGTGGTGCCACG +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVRMLTS*AWSGAT
Trigger: CGTGGCACCACTCCAGGCCAACGAGGTCAGCATCCT...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATTCTCCGACTGCACCTaGCGCCTCTCGATCCAGCTG +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAFSDCT*RLSIQL
Trigger: CAGCTGGATCGAGAGGCGCAAGGTGCAGTCGGAGAA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCACACAGCGGCCAAGAGTaGGTCCTCGAGTCCATCCCT +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAHSGQE*VLESIP
Trigger: AGGGATGGACTCGAGGACCAACTCTTGGCCGCTGTG...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTCGCTGGCTGTGTGCTaGGTGGTCTCCAGATTCTCC +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGSLAVC*VVSRFS
Trigger: GGAGAATCTGGAGACCACCAAGCACACAGCCAGCGA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp GAAGATGACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACGATCCCGCCCCAGCCTaGATGCTGGAGGAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: EDDRHGRGQLFQPRFSDDDPAPA*MLEEVH
Trigger: GTGGACTTCCTCCAGCATCAAGGCTGGGGCGGGATC...GTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGTCATCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp ACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTCGTGAGGTCCCCGTTGTaGAAGGGGTACGACCGGTTC +
Preference number: 5 (lower is better)
Translates to: TGMAGVSSFSRASAMTPVVRSPL*KGYDRF
Trigger: GAACCGGTCGTACCCCTTCAACAACGGGGACCTCAC...GACTGGAGTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS TCA 90 bp GTCGCTTCTCTTCGTCCCAGCGATGCCGGAGCTGGGCCTGCCAGGTaGAGGCCTGAGAACTCTCCACCTTGGCCACGATCATTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: VASLRPSDAGAGPAR*RPENSPPWPRSFWP
Trigger: TGGCCAAAATGATCGTGGCCAAGGTGGAGAGTTCTCAGGCCTTCACCTGGCAGGCCCAGCTCCGGCATCGCTGGGACGAAGAGAAGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 90 bp AAGGCTTCCAGGTCAGCCAGGCTGTTGGTGACGTGGTTGCTCAGGTaGCGCTTGAACATGAAGCCCCAGCGCCGGATTGTGCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: KASRSARLLVTWLLR*RLNMKPQRRIVLSR
Trigger: CCTGCTCAGCACAATCCGGCGCTGGGGCTTCATGTTCAAGCGGCACCTGAGCAACCACGTCACCAACAGCCTGGCTGACCTGGAAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAAGGCTATCGAAGAGTTaGGACAGGTGGCGGCTCACC +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEARLSKS*DRWRLT
Trigger: GGTGAGCCGCCACCTGTCCAAACTCTTCGATAGCCT...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGATCCTGTCGCCAGCGTaGAGGTTCCCCATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVILSPA*RFPMSS
Trigger: GCTGCTCATGGGGAACCTCAACGCTGGCGACAGGAT...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGAACCCAAAGCGCAACTaGTCCAGGCACGTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVNPKRN*SRHVGR
Trigger: CCTGCCCACGTGCCTGGACAAGTTGCGCTTTGGGTT...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGCCACCGTCCCATACTaGTCCACCTCGGGCATGTTC +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVATVPY*STSGMF
Trigger: GAACATGCCCGAGGTGGACAAGTATGGGACGGTGGC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTTGCCCATCATGATCTaGGCCGCCTTCCAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGLPIMI*AAFQLL
Trigger: CAAGAGCTGGAAGGCGGCCAAGATCATGATGGGCAA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATCGCTGGCTGTGTGCTaGGTGGTCTCCAGATTCTCC +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEASLAVC*VVSRFS
Trigger: GGAGAATCTGGAGACCACCAAGCACACAGCCAGCGA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGTGAGGTCCCCGTTGTaGAAGGGGTACGACCGGTTC +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVVRSPL*KGYDRF
Trigger: GAACCGGTCGTACCCCTTCAACAACGGGGACCTCAC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS CCA 90 bp CTGGACTTGAGCATCATGGTGCCTGTCCGCGGGTGCGGCTCGTGCTaGAATTCCATCATGCTCCAGGTACTGTCCAGGGCTTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: LDLSIMVPVRGCGSC*NSIMLQVLSRAFST
Trigger: GGTGCTGAAAGCCCTGGACAGTACCTGGAGCATGATGGAATTCCAGCACGAGCCGCACCCGCGGACAGGCACCATGATGCTCAAGTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000587177.1
CDS CCA 90 bp AATTCCTGGTTGATGTCGTCAAAGCGCTGGGAGTCCCCCGGGAGCTaGGTGCGGATGTCTTCGGAGCCGATGAAGATGCTCTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: NSWLMSSKRWESPGS*VRMSSEPMKMLSRW
Trigger: CCACCTGGAGAGCATCTTCATCGGCTCCGAAGACATCCGCACCCAGCTCCCGGGGGACTCCCAGCGCTTTGACGACATCAACCAGGAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000587177.1
CDS CCA 90 bp AGGTTGATCACCCGCTGCTTCACCTCGTTGGCAGGGGTGGTCCTCTaGATGGCTTTCTCAAACACCACGTTGAAGGCCTGGGGATCCGCC +
Preference number: 5 (lower is better)
Translates to: RLITRCFTSLAGVVL*MAFSNTTLKAWGSA
Trigger: GGCGGATCCCCAGGCCTTCAACGTGGTGTTTGAGAAAGCCATCCAGAGGACCACCCCTGCCAACGAGGTGAAGCAGCGGGTGATCAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590227.5
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCACGGGAGGCATGTTTTaGTGGATCAGGGGGATGTTC +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGTGGMF*WIRGMF
Trigger: GAACATCCCCCTGATCCACAAAAACATGCCTCCCGT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCACTGCCACCAACGCTTaGCTGAAGTTGACGTGGATG +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGTATNA*LKLTWM
Trigger: CATCCACGTCAACTTCAGCAAAGCGTTGGTGGCAGT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCCCTCCTTGAGGGGCTaGGTCAAGCCCATTCTGGCG +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSPSLRG*VKPILA
Trigger: CGCCAGAATGGGCTTGACCAAGCCCCTCAAGGAGGG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTGCAGCTGCACCTGGTaGTCCTCCAGCGTCTCCACC +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSCSCTW*SSSVST
Trigger: GGTGGAGACGCTGGAGGACAACCAGGTGCAGCTGCA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCAAGTGGGCCAGGTACTaGGACATCATCAGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGKWARY*DIIRFC
Trigger: GCAGAACCTGATGATGTCCAAGTACCTGGCCCACTT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAATTCCCAGGCCCACCTaGAGAGGTTTGTCACTGGCA +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAIPRPT*RGLSLA
Trigger: TGCCAGTGACAAACCTCTCAAGGTGGGCCTGGGAAT...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAAAGAGGATCATCAGGTaGGCCTTCTCCGACTGCACC +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAKRIIR*AFSDCT
Trigger: GGTGCAGTCGGAGAAGGCCAACCTGATGATCCTCTT...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCACGTGGGCAGGTACTaGTCAAAGAGGATCATCAGG +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGHVGRY*SKRIIR
Trigger: CCTGATGATCCTCTTTGACAAGTACCTGCCCACGTG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGCCAAGGGACTTGACTaGGGGTCGCATGGAGGAGAT +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVAKGLD*GSHGGD
Trigger: ATCTCCTCCATGCGACCCCAAGTCAAGTCCCTTGGC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CATGAAGAGTCCGTACACGTAGGAGCCCTCTCGCGGAGGAGCGGTCATGTCCTCAAGCTGATGGAGGCCTaGACTTCCCACGGAATCCCC +
Preference number: 5 (lower is better)
Translates to: HEESVHVGALSRRSGHVLKLMEA*TSHGIP
Trigger: GGGGATTCCGTGGGAAGTCAAGGCCTCCATCAGCTT...GAGGACATGACCGCTCCTCCGCGAGAGGGCTCCTACGTGTACGGACTCTTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCGACCACCTGGATCAGTaGGTCTGCGCTCTCATTCTT +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGDHLDQ*VCALIL
Trigger: AAGAATGAGAGCGCAGACCAACTGATCCAGGTGGTC...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAACAGACAGACACATCTaGTCCAGGGGCCACTCGTTC +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEATDRHI*SRGHSF
Trigger: GAACGAGTGGCCCCTGGACAAGATGTGTCTGTCTGT...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS TCA 90 bp GCGTCAGCACCAGCACCTGGACGTCGGGCTTTTCAAAGAACTCTGTaGACAGGGCCACGTTCTCCTCGGCGCCTATCAGCTTGCTCCACT +
Preference number: 5 (lower is better)
Translates to: ASAPAPGRRAFQRTL*TGPRSPRRLSACST
Trigger: AGTGGAGCAAGCTGATAGGCGCCGAGGAGAACGTGGCCCTGTTCACAGAGTTCTTTGAAAAGCCCGACGTCCAGGTGCTGGTGCTGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 90 bp GTTTCATGGACACCTCTAGCCTCTCCTGCAGCTCCAGGCTCCATTTaGGCTGCCCGGCCACGGGAGGCATGTTTTTGTGGATCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: VSWTPLASPAAPGSI*AARPREACFCGSGG
Trigger: TCCCCCTGATCCACAAAAACATGCCTCCCGTGGCCGGGCAGCTCAAATGGAGCCTGGAGCTGCAGGAGAGGCTAGAGGTGTCCATGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS TCA 90 bp ATGCTGACCTCGTTGGCCTGGAGTGGTGCCACGGTCAGCTTCACCTaGATGGCCAGTTTCTTGGTATTTGCCCAGTGCTCCGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: MLTSLAWSGATVSFT*MASFLVFAQCSGSS
Trigger: GGAGCTGCCGGAGCACTGGGCAAATACCAAGAAACTGGCCATTCAGGTGAAGCTGACCGTGGCACCACTCCAGGCCAACGAGGTCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 90 bp AGCGGAAGGCCAGGTGCTGCGTCAGGATTGTGTTGTAGATGGTGGTaGGGGCCTCCTGGCCGGGGAAGCTCACAGCAAACACGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: SGRPGAASGLCCRWW*GPPGRGSSQQTRRN
Trigger: ATTTCTGCGTGTTTGCTGTGAGCTTCCCCGGCCAGGAGGCCCTCACCACCATCTACAACACAATCCTGACGCAGCACCTGGCCTTCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS GCA 90 bp ATGGACACCTCTAGCCTCTCCTGCAGCTCCAGGCTCCATTTGAGCTaGCCGGCCACGGGAGGCATGTTTTTGTGGATCAGGGGGATGTTC +
Preference number: 5 (lower is better)
Translates to: MDTSSLSCSSRLHLS*PATGGMFLWIRGMF
Trigger: GAACATCCCCCTGATCCACAAAAACATGCCTCCCGTGGCCGGGCAGCTCAAATGGAGCCTGGAGCTGCAGGAGAGGCTAGAGGTGTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS GCA 90 bp GGGATCTCTCCTGAGGCCAGCAGGTCATTGATCAGCACCAGAAACTaGTCCTCGGCCACCTGGGAGTCTGTCATCAGGAACACCGAGGGA +
Preference number: 5 (lower is better)
Translates to: GISPEASRSLISTRN*SSATWESVIRNTEG
Trigger: TCCCTCGGTGTTCCTGATGACAGACTCCCAGGTGGCCGAGGAGCAGTTTCTGGTGCTGATCAATGACCTGCTGGCCTCAGGAGAGATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS GCA 90 bp CTTGTTTTTGATCCGGGACAGCTTCTCTTGTGCCTCTGCCAGCTCTaGATTAGCCTCCTCCAGTGCCTGCCTCTTGGGCGCCACGTCGCA +
Preference number: 5 (lower is better)
Translates to: LVFDPGQLLLCLCQL*ISLLQCLPLGRHVA
Trigger: TGCGACGTGGCGCCCAAGAGGCAGGCACTGGAGGAGGCTAATGCAGAGCTGGCAGAGGCACAAGAGAAGCTGTCCCGGATCAAAAACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CCA 90 bp TCTTCCATCAAGGCCTTGAATTCCTGGTTGATGTCGTCAAAGCGCTaGGAGTCCCCCGGGAGCTGGGTGCGGATGTCTTCGGAGCCGATG +
Preference number: 5 (lower is better)
Translates to: SSIKALNSWLMSSKR*ESPGSWVRMSSEPM
Trigger: CATCGGCTCCGAAGACATCCGCACCCAGCTCCCGGGGGACTCCCAGCGCTTTGACGACATCAACCAGGAATTCAAGGCCTTGATGGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000587177.1
CDS CCA 90 bp AGGAGCCCTCTCGCGGAGGAGCGGTCATGTCCTCTCGGTTTTTCTTaGTCACCTCGACAGACAGACACATCTTGTCCAGGGGCCACTCGT +
Preference number: 5 (lower is better)
Translates to: RSPLAEERSCPLGFS*SPRQTDTSCPGATR
Trigger: ACGAGTGGCCCCTGGACAAGATGTGTCTGTCTGTCGAGGTGACCAAGAAAAACCGAGAGGACATGACCGCTCCTCCGCGAGAGGGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000590227.5
ENST00000591369.5
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTATCATGCCGGCTGCATaGAGCGTCAGCACCAGCACC +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSIMPAA*SVSTST
Trigger: GGTGCTGGTGCTGACGCTCAATGCAGCCGGCATGAT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTAGGTCAGCCAGGCTGTaGGTGACGTGGTTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSRSARL*VTWLLR
Trigger: CCTGAGCAACCACGTCACCAACAGCCTGGCTGACCT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGACCTCCACGGGGTCATaGCCATTGGAGAGAATGTCC +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVTSTGS*PLERMS
Trigger: GGACATTCTCTCCAATGGCAATGACCCCGTGGAGGT...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCCCACCTTGAGAGGTTaGTCACTGGCATCGAGCCGG +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSPTLRG*SLASSR
Trigger: CCGGCTCGATGCCAGTGACAAACCTCTCAAGGTGGG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGCCAGGGTGAGGACCTaGTTGTCATCCATGACTGTG +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVARVRT*LSSMTV
Trigger: CACAGTCATGGATGACAACAAGGTCCTCACCCTGGC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAGGGATCGCCAATCCCTaGAGCAAAGTGGCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAGIANP*SKVAED
Trigger: ATCTTCTGCCACTTTGCTCAAGGGATTGGCGATCCC...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp GCAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTGCCAAGGGACTTGACTaGGGGTCGCATGGAGGAGAT +
Preference number: 5 (lower is better)
Translates to: AAPRLPGSTSLPSLWSSSAKGLD*GSHGGD
Trigger: ATCTCCTCCATGCGACCCCAAGTCAAGTCCCTTGGC...ACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp TGGGCTGTGAGGCAGGAGCGAGCTAAACCTGTAGGAGCAGCGCCACGGCTGCCATCCAGCCTCTCGATTTaGGCAACAAGTTCCGTTCTC +
Preference number: 5 (lower is better)
Translates to: WAVRQERAKPVGAAPRLPSSLSI*ATSSVL
Trigger: GAGAACGGAACTTGTTGCCAAAATCGAGAGGCTGGA...TGGCAGCCGTGGCGCTGCTCCTACAGGTTTAGCTCGCTCCTGCCTCACAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCACGTGGCATCGGCCTCTaGCTGACACTTGATTTTCTC +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEARGIGL*LTLDFL
Trigger: GAGAAAATCAAGTGTCAGCAAGAGGCCGATGCCACG...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTAGGATCAGGCGGAACTaGGGGTGGTACTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: QRHGCQDPLRCLLFGLQVRIRRN*GWYSTS
Trigger: GGAGGTGGAGTACCACCCCAAGTTCCGCCTGATCCT...AACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTTCTCAAACACCACGTaGAAGGCCTTGAGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGFSNTT*KALREN
Trigger: GTTCTCCCTCAAGGCCTTCAACGTGGTGTTTGAGAA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAGCCAGGAAAATGAGTTaGTCCCTCTCGAAGAGTCCC +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAARKMS*SLSKSP
Trigger: GGGACTCTTCGAGAGGGACAAACTCATTTTCCTGGC...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATTGAACTCCATCTCCTaGGTGCACATCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEALNSIS*VHISRV
Trigger: CACCCTGGAGATGTGCACCAAGGAGATGGAGTTCAA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp ACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTCGCGAAGAGCATGCACTaGAACTCCATCTCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: TGMAGVSSFSRASAMTPVAKSMH*NSISLV
Trigger: CACCAAGGAGATGGAGTTCAAGTGCATGCTCTTCGC...GACTGGAGTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCCCAGGTTCAGCTCCTaGAGCGAACGGCGCATTTCG +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSPRFSS*SERRIS
Trigger: CGAAATGCGCCGTTCGCTCAAGGAGCTGAACCTGGG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS GCA 90 bp CTGGCATTTCCGCCGCAGGATGCTGACCTCGTTGGCCTGGAGTGGTaGCACGGTCAGCTTCACCTGAATGGCCAGTTTCTTGGTATTTGC +
Preference number: 5 (lower is better)
Translates to: LAFPPQDADLVGLEW*HGQLHLNGQFLGIC
Trigger: GCAAATACCAAGAAACTGGCCATTCAGGTGAAGCTGACCGTGGCACCACTCCAGGCCAACGAGGTCAGCATCCTGCGGCGGAAATGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 90 bp GCTGACCTTCTCGGCCTCGATGCCGACCACCTGGATCAGTTGGTCTaGGCTCTCATTCTTCTGCTTGAGCTCAGCCTCCTGAATCGCCAA +
Preference number: 5 (lower is better)
Translates to: ADLLGLDADHLDQLV*ALILLLELSLLNRQ
Trigger: TTGGCGATTCAGGAGGCTGAGCTCAAGCAGAAGAATGAGAGCGCAGACCAACTGATCCAGGTGGTCGGCATCGAGGCCGAGAAGGTCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS GCA 90 bp CTCTGTCAGGTTGTTCTTATTCAGAGTGTCCAGAGCCTCCTGGGCTaGCAGCAGGGCCGGTTCTGCTTTGGCCAGGTCTGTTTCACAGGC +
Preference number: 5 (lower is better)
Translates to: LCQVVLIQSVQSLLG*QQGRFCFGQVCFTG
Trigger: GCCTGTGAAACAGACCTGGCCAAAGCAGAACCGGCCCTGCTGGCAGCCCAGGAGGCTCTGGACACTCTGAATAAGAACAACCTGACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS GCA 90 bp GCACCCTCTGCAGTGAGGGAGGTTGCAGTGTTCAAGCGATTCTCCTaGCTCAGCCTCCCAAGGCGCACACCACCACACCTGGCTAATTTT +
Preference number: 5 (lower is better)
Translates to: APSAVREVAVFKRFS*LSLPRRTPPHLANF
Trigger: AAAATTAGCCAGGTGTGGTGGTGTGCGCCTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACACTGCAACCTCCCTCACTGCAGAGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590227.5
CDS CCA 90 bp TCTGCTGCCAGCTTGTCACCTCCTTCAGGAAGTGGGCCAGGTACTTaGACATCATCAGGTTCTGCAGCTGCACCTGGTTGTCCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: SAASLSPPSGSGPGT*TSSGSAAAPGCPPA
Trigger: CGCTGGAGGACAACCAGGTGCAGCTGCAGAACCTGATGATGTCCAAGTACCTGGCCCACTTCCTGAAGGAGGTGACAAGCTGGCAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000587177.1
CDS CCA 90 bp GCCAGCAGGTCATTGATCAGCACCAGAAACTGCTCCTCGGCCACCTaGGAGTCTGTCATCAGGAACACCGAGGGAACGTTCTTCACGGCA +
Preference number: 5 (lower is better)
Translates to: ASRSLISTRNCSSAT*ESVIRNTEGTFFTA
Trigger: TGCCGTGAAGAACGTTCCCTCGGTGTTCCTGATGACAGACTCCCAGGTGGCCGAGGAGCAGTTTCTGGTGCTGATCAATGACCTGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CCA 90 bp TTGCCTCCACCACCTTCTCCTCGATCTCGCTGGCTGTGTGCTTGGTaGTCTCCAGATTCTCCACCAAGGCCGTGTCTCCCAGAAAGTTCC +
Preference number: 5 (lower is better)
Translates to: LPPPPSPRSRWLCAW*SPDSPPRPCLPESS
Trigger: GGAACTTTCTGGGAGACACGGCCTTGGTGGAGAATCTGGAGACCACCAAGCACACAGCCAGCGAGATCGAGGAGAAGGTGGTGGAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGTTGGTGTAAACGTTTaGCAGGGCTGGCCAGTAGCA +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVVGVNV*QGWPVA
Trigger: TGCTACTGGCCAGCCCTGCAAAACGTTTACACCAAC...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTACCTCCAGGGTCGGGTaGAAGGTCAGCCCATCCTCG +
Preference number: 5 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPTSRVG*KVSPSS
Trigger: CGAGGATGGGCTGACCTTCAACCCGACCCTGGAGGT...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTGGTCGTCTCAGTCTaGCCGGTCCCAGCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYLVVSV*PVPAGP
Trigger: CGGCCCCGCTGGGACCGGCAAGACTGAGACGACCAA...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATAGGGGGATCCGCTCGTaGCTGGCCAGGGTGAGGACC +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYRGIRS*LARVRT
Trigger: GGTCCTCACCCTGGCCAGCAACGAGCGGATCCCCCT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTAGGGCCGGTTCTGCTTaGGCCAGGTCTGTTTCACAG +
Preference number: 5 (lower is better)
Translates to: QRHGCQDPLRCLLFGLQVRAGSA*ARSVSQ
Trigger: CTGTGAAACAGACCTGGCCAAAGCAGAACCGGCCCT...AACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTCAGGGATGTGCTCCTaGTCGAACTTCTTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVSGMCS*SNFFRE
Trigger: CTCCCTGAAGAAGTTCGACAAGGAGCACATCCCTGA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAGTTAGGTTGCTCAGGTaGGCGTTAAGTTCGGCAATC +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAVRLLR*ALSSAI
Trigger: GATTGCCGAACTTAACGCCAACCTGAGCAACCTAAC...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGGTACTCCACCTCCTaGTCACCGATCTTAATGTAC +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGWYSTS*SPILMY
Trigger: GTACATTAAGATCGGTGACAAGGAGGTGGAGTACCA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp AGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACTCATAGATGTAGATCTGGGCGCTCTTaGGCCACCACAGCGGCCAAG +
Preference number: 5 (lower is better)
Translates to: RHRWGRGCVFCTRDTHRCRSGRS*ATTAAK
Trigger: CTTGGCCGCTGTGGTGGCCAAAGAGCGCCCAGATCT...ACATCTATGAGTGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATCCCTGGGCGCCGAACTaGCGCCTCTCTGCCACCACA +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYPWAPN*RLSATT
Trigger: TGTGGTGGCAGAGAGGCGCAAGTTCGGCGCCCAGGG...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp GTTAAAGGTCCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACCCAGGTTCAGCTCCTaGAGCGAACGGCGCATTTCG +
Preference number: 5 (lower is better)
Translates to: VKGPDIGGAADACFVHGTPRFSS*SERRIS
Trigger: CGAAATGCGCCGTTCGCTCAAGGAGCTGAACCTGGG...TGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGGACCTTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS TCA 90 bp GATGTTCTCCACCTCGTCCTCCATAAACAGCCCAGGGATCTCTCCTaGGGCCAGCAGGTCATTGATCAGCACCAGAAACTGCTCCTCGGC +
Preference number: 5 (lower is better)
Translates to: DVLHLVLHKQPRDLS*GQQVIDQHQKLLLG
Trigger: GCCGAGGAGCAGTTTCTGGTGCTGATCAATGACCTGCTGGCCTCAGGAGAGATCCCTGGGCTGTTTATGGAGGACGAGGTGGAGAACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS GCA 90 bp TCCCGGATCTGGTGGGACCAGTCGATGATGGTGGTTTCAATGGCGTaGAGGAGCAAGTTGTCCAGTGAAGAGGGGATCCTCTCCATGGAC +
Preference number: 5 (lower is better)
Translates to: SRIWWDQSMMVVSMA*RSKLSSEEGILSMD
Trigger: GTCCATGGAGAGGATCCCCTCTTCACTGGACAACTTGCTCCTGCACGCCATTGAAACCACCATCATCGACTGGTCCCACCAGATCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 90 bp TTTACAGCCAGGGAGATGCCACTCAGGACTTCCTCGATTTCACCTTaGAGGCCCTTCAGCACCTCTTCCGGGCTCAGGAAGGTTCGTGTC +
Preference number: 5 (lower is better)
Translates to: FTAREMPLRTSSISP*RPFSTSSGLRKVRV
Trigger: GACACGAACCTTCCTGAGCCCGGAAGAGGTGCTGAAGGGCCTGCAAGGTGAAATCGAGGAAGTCCTGAGTGGCATCTCCCTGGCTGTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS GCA 90 bp GTGATTTTTGCCTCCACCACCTTCTCCTCGATCTCGCTGGCTGTGTaGTTGGTGGTCTCCAGATTCTCCACCAAGGCCGTGTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: VIFASTTFSSISLAV*LVVSRFSTKAVSPR
Trigger: TCTGGGAGACACGGCCTTGGTGGAGAATCTGGAGACCACCAAGCACACAGCCAGCGAGATCGAGGAGAAGGTGGTGGAGGCAAAAATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CCA 90 bp CAGGGTATGATCATGCCGGCTGCATTGAGCGTCAGCACCAGCACCTaGACGTCGGGCTTTTCAAAGAACTCTGTGAACAGGGCCACGTTC +
Preference number: 5 (lower is better)
Translates to: QGMIMPAALSVSTST*TSGFSKNSVNRATF
Trigger: GAACGTGGCCCTGTTCACAGAGTTCTTTGAAAAGCCCGACGTCCAGGTGCTGGTGCTGACGCTCAATGCAGCCGGCATGATCATACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 90 bp TTGCTGGCATTTCCGCCGCAGGATGCTGACCTCGTTGGCCTGGAGTaGTGCCACGGTCAGCTTCACCTGAATGGCCAGTTTCTTGGTATT +
Preference number: 5 (lower is better)
Translates to: LLAFPPQDADLVGLE*CHGQLHLNGQFLGI
Trigger: AATACCAAGAAACTGGCCATTCAGGTGAAGCTGACCGTGGCACCACTCCAGGCCAACGAGGTCAGCATCCTGCGGCGGAAATGCCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 90 bp ATGGCCTTCTCTTTGCTGACCTTCTCGGCCTCGATGCCGACCACCTaGATCAGTTGGTCTGCGCTCTCATTCTTCTGCTTGAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: MAFSLLTFSASMPTT*ISWSALSFFCLSSA
Trigger: GGCTGAGCTCAAGCAGAAGAATGAGAGCGCAGACCAACTGATCCAGGTGGTCGGCATCGAGGCCGAGAAGGTCAGCAAAGAGAAGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CCA 90 bp AGGTTGATCACCCGCTGCTTCACCTCGTTGGCAGGGGTGGTCCTCTaGATGGCTTTCTCAAACACCACGTTGAAGGCCTTGAGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: RLITRCFTSLAGVVL*MAFSNTTLKALREN
Trigger: GTTCTCCCTCAAGGCCTTCAACGTGGTGTTTGAGAAAGCCATCCAGAGGACCACCCCTGCCAACGAGGTGAAGCAGCGGGTGATCAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCTCCACTTGTCCGGCTaGAACTTCAGGACGATGGAG +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSLHLSG*NFRTME
Trigger: CTCCATCGTCCTGAAGTTCAAGCCGGACAAGTGGAG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTTCCTCGATTTCACCTaGCAGGCCCTTCAGCACCTC +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSFLDFT*QALQHL
Trigger: GAGGTGCTGAAGGGCCTGCAAGGTGAAATCGAGGAA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAATCCTGTTCTGCAAGTaGTGCAGAATTTCTCGCACC +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAILFCK*CRISRT
Trigger: GGTGCGAGAAATTCTGCACAACTTGCAGAACAGGAT...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTCCATCTGCTCAACGTaGATATCTTTCCACTTGGTG +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGSICST*ISFHLV
Trigger: CACCAAGTGGAAAGATATCAACGTTGAGCAGATGGA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCACAGGTTTTCATCTCCTaGTCCAAAGACCTCATGTCC +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAQVFIS*SKDLMS
Trigger: GGACATGAGGTCTTTGGACAAGGAGATGAAAACCTG...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTTCGAGAGCAGCTCCTaGCACAAGGTGTACAGGGTG +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSFESSS*HKVYRV
Trigger: CACCCTGTACACCTTGTGCAAGGAGCTGCTCTCGAA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATCATCCATGACTGTGTaGAGAGACTCGATCCACATG +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEASSMTV*RDSIHM
Trigger: CATGTGGATCGAGTCTCTCAACACAGTCATGGATGA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAAAACACAGGATCACCTaGAGCTGTCTGCGCACTTTT +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAKHRIT*SCLRTF
Trigger: AAAAGTGCGCAGACAGCTCAAGGTGATCCTGTGTTT...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCAGGTTCTGGTACAGTTaGATCTGCTCCAGAAAGGTT +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGRFWYS*ICSRKV
Trigger: AACCTTTCTGGAGCAGATCAAACTGTACCAGAACCT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CATGAAGAGTCCGTACACGTAGGAGCCCTCTCGCGGAGGAGCGGTCATGTCCTCTTGATGACCTCGACCTaGACTTCTTCCTGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: HEESVHVGALSRRSGHVLLMTST*TSSWSA
Trigger: TGCTGACCAGGAAGAAGTCAAGGTCGAGGTCATCAA...GAGGACATGACCGCTCCTCCGCGAGAGGGCTCCTACGTGTACGGACTCTTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTCAGTGACGTTCTTATaGATGACCTCGACCTTGACT +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGSVTFL*MTSTLT
Trigger: AGTCAAGGTCGAGGTCATCAATAAGAACGTCACTGA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp TGGGCTGTGAGGCAGGAGCGAGCTAAACCTGTAGGAGCAGCGCCACGGCTGCCATGTTTCACAGGCCTTTaGCTTCTCAGTGACGTTCTT +
Preference number: 5 (lower is better)
Translates to: WAVRQERAKPVGAAPRLPCFTGL*LLSDVL
Trigger: AAGAACGTCACTGAGAAGCAAAAGGCCTGTGAAACA...TGGCAGCCGTGGCGCTGCTCCTACAGGTTTAGCTCGCTCCTGCCTCACAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp GTTAAAGGTCCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACATTCCAGCTCTTGTCCTaGGGGATCTTGCCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: VKGPDIGGAADACFVHGTFQLLS*GILPPG
Trigger: ACCTGGGGGCAAGATCCCCAAGGACAAGAGCTGGAA...TGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGGACCTTTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTAGGAAGGTGTCCACCTaGCCCATCATGATCTTGGCC +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSRKVST*PIMILA
Trigger: GGCCAAGATCATGATGGGCAAGGTGGACACCTTCCT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACTCATAGATGAACGTCGGGTTGCCTaGGTAGGGCTTGAAGGCCTT +
Preference number: 5 (lower is better)
Translates to: PDIGGAADACFVHGTLIDERRVA*VGLEGL
Trigger: AAGGCCTTCAAGCCCTACCAAGGCAACCCGACGTTC...ATCTATGAGTGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGATCCACTTGATTCCTaGGAGCTGGGCGTCCACGAT +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSDPLDS*ELGVHD
Trigger: ATCGTGGACGCCCAGCTCCAAGGAATCAAGTGGATC...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATCGCTGCTTCACCTCGTaGGCAGGGGTGGTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYRCFTS*AGVVLW
Trigger: CCAGAGGACCACCCCTGCCAACGAGGTGAAGCAGCG...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp AGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACTCATAGATGTATGGTGAGGTCCCCGTaGTTGAAGGGGTACGACCGG +
Preference number: 5 (lower is better)
Translates to: RHRWGRGCVFCTRDTHRCMVRSP*LKGYDR
Trigger: CCGGTCGTACCCCTTCAACAACGGGGACCTCACCAT...ACATCTATGAGTGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTCCGAGTCCGTCTCTTTaGGCTGCATTTCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSPSPSL*AAFPGQ
Trigger: CTGTCCTGGAAATGCAGCCAAAAGAGACGGACTCGG...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCATGATCTCAGCCATGTaGAAAGTCTCCGGAATCTTC +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGMISAM*KVSGIF
Trigger: GAAGATTCCGGAGACTTTCAACATGGCTGAGATCAT...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTACAGACAGACACATCTaGTCCAGGGGCCACTCGTTC +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSTDRHI*SRGHSF
Trigger: GAACGAGTGGCCCCTGGACAAGATGTGTCTGTCTGT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTTCGCTGCCTTCTCTTaGGTCTTCAAGTTAAAGGTC +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGFAAFS*VFKLKV
Trigger: GACCTTTAACTTGAAGACCAAAGAGAAGGCAGCGAA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS TCA 90 bp CCACGTTCTCCTCGGCGCCTATCAGCTTGCTCCACTTGTCCGGCTTaGACTTCAGGACGATGGAGGCAACTTCCTCCAGATACTCTAGTC +
Preference number: 5 (lower is better)
Translates to: PRSPRRLSACSTCPA*TSGRWRQLPPDTLV
Trigger: GACTAGAGTATCTGGAGGAAGTTGCCTCCATCGTCCTGAAGTTCAAGCCGGACAAGTGGAGCAAGCTGATAGGCGCCGAGGAGAACGTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 90 bp CAGCTCGATGGTTTGCTTCAGGGGCTCAAACATGTTGTCGGTGGCTaGTTGCCTCTCCTTGACTTTCATCAGGTGCCCCATCACCTCCAC +
Preference number: 5 (lower is better)
Translates to: QLDGLLQGLKHVVGG*LPLLDFHQVPHHLH
Trigger: GTGGAGGTGATGGGGCACCTGATGAAAGTCAAGGAGAGGCAAGCAGCCACCGACAACATGTTTGAGCCCCTGAAGCAAACCATCGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 90 bp ATGTCTTCCGAGACCACCTGGGGCCATCCAGCCATGTTCTCACTTTaGTTTAACAGAGAAGAGAGGACCTCCTCCACCACCGCGATCAGC +
Preference number: 5 (lower is better)
Translates to: MSSETTWGHPAMFSL*FNREERTSSTTAIS
Trigger: GCTGATCGCGGTGGTGGAGGAGGTCCTCTCTTCTCTGTTAAACCAAAGTGAGAACATGGCTGGATGGCCCCAGGTGGTCTCGGAAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 90 bp ACGGTCTTCTCCGTGAGCAGGCACTCCAGCAGGTACAGAATCGTTTaGATCACCGTGATCTCCGGCACTGGCGTGATCTTCTTGAACCCA +
Preference number: 5 (lower is better)
Translates to: TVFSVSRHSSRYRIV*ITVISGTGVIFLNP
Trigger: TGGGTTCAAGAAGATCACGCCAGTGCCGGAGATCACGGTGATCCAAACGATTCTGTACCTGCTGGAGTGCCTGCTCACGGAGAAGACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CCA 90 bp TTTTTGCCTCCACCACCTTCTCCTCGATCTCGCTGGCTGTGTGCTTaGTGGTCTCCAGATTCTCCACCAAGGCCGTGTCTCCCAGAAAGT +
Preference number: 5 (lower is better)
Translates to: FLPPPPSPRSRWLCA*WSPDSPPRPCLPES
Trigger: ACTTTCTGGGAGACACGGCCTTGGTGGAGAATCTGGAGACCACCAAGCACACAGCCAGCGAGATCGAGGAGAAGGTGGTGGAGGCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGCAAGGCACGGGCTCTTaGTCCTTAAAGAAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVQGTGS*SLKKSF
Trigger: GAAGCTTTTCTTTAAGGACAAAGAGCCCGTGCCTTG...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTCAGCGCTCAATAACTaGACATCAATTGCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGSALNN*TSIASS
Trigger: ACTGGAAGCAATTGATGTCAAGTTATTGAGCGCTGA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGAGCAGCTCGATGGTTaGCTTCAGGGGCTCAAACAT +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSEQLDG*LQGLKH
Trigger: ATGTTTGAGCCCCTGAAGCAAACCATCGAGCTGCTC...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCGGAGATGCTCTTTTGTaGCTTATTCAGGGACTTGTA +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGGDALL*LIQGLV
Trigger: TACAAGTCCCTGAATAAGCAACAAAAGAGCATCTCC...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATAACAGGCCCCCGGACTaGGACAGCGCCTCCATGATG +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYNRPPD*DSASMM
Trigger: CATCATGGAGGCGCTGTCCAAGTCCGGGGGCCTGTT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTCTTCCATCAAGGCCTaGAATTCCTGGTTGATGTCG +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVSSIKA*NSWLMS
Trigger: CGACATCAACCAGGAATTCAAGGCCTTGATGGAAGA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATCGCAGGTGACGGCCTaGGGGTCCAGGTCCACGGCG +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERSQVTA*GSRSTA
Trigger: CGCCGTGGACCTGGACCCCAAGGCCGTCACCTGCGA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCGGGAACTTGATAGTCTaGAATTCGTTGATCCACCAT +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGGNLIV*NSLIHH
Trigger: ATGGTGGATCAACGAATTCAAGACTATCAAGTTCCC...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGGGAGAGGCTCTGTTaGCCACTGCCGCCCACCCCC +
Preference number: 5 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRERERLC*PLPPTP
Trigger: GGGGGTGGGCGGCAGTGGCAAACAGAGCCTCTCCCG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACTCATAGATTTCATGCCAAGGGACTaGACTTGGGGTCGCATGGAG +
Preference number: 5 (lower is better)
Translates to: PDIGGAADACFVHGTLIDFMPRD*TWGRME
Trigger: CTCCATGCGACCCCAAGTCAAGTCCCTTGGCATGAA...ATCTATGAGTGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGCAATGGCCTTCTCTTaGCTGACCTTCTCGGCCTCG +
Preference number: 5 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPAMAFS*LTFSAS
Trigger: CGAGGCCGAGAAGGTCAGCAAAGAGAAGGCCATTGC...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAACGGCGGCGGTGACGTaGACCACAGCATCCGGCGGG +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERTAAVT*TTASGG
Trigger: CCCGCCGGATGCTGTGGTCAACGTCACCGCCGCCGT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTGTGGGTTGAAGTACTaGGTGTGTAGGATCAGGCGG +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSCGLKY*VCRIRR
Trigger: CCGCCTGATCCTACACACCAAGTACTTCAACCCACA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCCATTCTTTCACATTCTaGAAAGGCGACTACCACGTA +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGHSFTF*KGDYHV
Trigger: TACGTGGTAGTCGCCTTTCAAGAATGTGAAAGAATG...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS TCA 90 bp CTGAGTCTTTGCTCAGCACATCCCGGATCTGGTGGGACCAGTCGATaGTGGTGGTTTCAATGGCGTGCAGGAGCAAGTTGTCCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: LSLCSAHPGSGGTSR*WWFQWRAGASCPVK
Trigger: CTTCACTGGACAACTTGCTCCTGCACGCCATTGAAACCACCATCATCGACTGGTCCCACCAGATCCGGGATGTGCTGAGCAAAGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 90 bp TCGATGGTTTGCTTCAGGGGCTCAAACATGTTGTCGGTGGCTGCTTaGCTCTCCTTGACTTTCATCAGGTGCCCCATCACCTCCACAAGC +
Preference number: 5 (lower is better)
Translates to: SMVCFRGSNMLSVAA*LSLTFIRCPITSTS
Trigger: GCTTGTGGAGGTGATGGGGCACCTGATGAAAGTCAAGGAGAGGCAAGCAGCCACCGACAACATGTTTGAGCCCCTGAAGCAAACCATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 90 bp AGCTCCTCCAGCTGCACCACCTTCAGCACGAAGCTGTCCTCCGCCTaGAGCTTGAGCTCCACGATGCTCTGCTTGATGATCTTTTCAAAA +
Preference number: 5 (lower is better)
Translates to: SSSSCTTFSTKLSSA*SLSSTMLCLMIFSK
Trigger: TTTTGAAAAGATCATCAAGCAGAGCATCGTGGAGCTCAAGCTGCAGGCGGAGGACAGCTTCGTGCTGAAGGTGGTGCAGCTGGAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 90 bp CTCCAGCAGGTACAGAATCGTTTGGATCACCGTGATCTCCGGCACTaGCGTGATCTTCTTGAACCCAAAGCGCAACTTGTCCAGGCACGT +
Preference number: 5 (lower is better)
Translates to: LQQVQNRLDHRDLRH*RDLLEPKAQLVQAR
Trigger: ACGTGCCTGGACAAGTTGCGCTTTGGGTTCAAGAAGATCACGCCAGTGCCGGAGATCACGGTGATCCAAACGATTCTGTACCTGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CCA 90 bp CCGTGCTCTGCAGCTTCATCAGGCCGTTCTCCAGCCTCTCGATTTTaGCAACAAGTTCCGTTCTCTTCTTGGCCAGCAGGTTCTGGTACA +
Preference number: 5 (lower is better)
Translates to: PCSAASSGRSPASRF*QQVPFSSWPAGSGT
Trigger: TGTACCAGAACCTGCTGGCCAAGAAGAGAACGGAACTTGTTGCCAAAATCGAGAGGCTGGAGAACGGCCTGATGAAGCTGCAGAGCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTAGCTTTGCGGAGGACTaGATACAGCTGCAGTCATCA +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSSFAED*IQLQSS
Trigger: TGATGACTGCAGCTGTATCAAGTCCTCCGCAAAGCT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCCAGTTTCTTGGTATTaGCCCAGTGCTCCGGCAGCT +
Preference number: 5 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPPVSWY*PSAPAA
Trigger: AGCTGCCGGAGCACTGGGCAAATACCAAGAAACTGG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGCTTCTGCTGCCAGCTaGTCACCTCCTTCAGGAAGT +
Preference number: 5 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPASAAS*SPPSGS
Trigger: ACTTCCTGAAGGAGGTGACAAGCTGGCAGCAGAAGC...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTAGTCCCTGGAAAATATaGGAGAGGTCCCTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSSPWKI*ERSLRL
Trigger: CAACCTCAGGGACCTCTCCAATATTTTCCAGGGACT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTCCAGCCTCTCGATTTaGGCAACAAGTTCCGTTCTC +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSSSLSI*ATSSVL
Trigger: GAGAACGGAACTTGTTGCCAAAATCGAGAGGCTGGA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp GCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTAAAGGTCCAGGCAATGGCCTTCTCTTaGCTGACCTTCTCGGCCTCG +
Preference number: 5 (lower is better)
Translates to: AARIHFAAFSLVFKLKVQAMAFS*LTFSAS
Trigger: CGAGGCCGAGAAGGTCAGCAAAGAGAAGGCCATTGC...CTGGACCTTTAACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTGTTTCACAGGCCTTTaGCTTCTCAGTGACGTTCTT +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVCFTGL*LLSDVL
Trigger: AAGAACGTCACTGAGAAGCAAAAGGCCTGTGAAACA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTTCAGCTCTGTCAGGTaGTTCTTATTCAGAGTGTCC +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVFSSVR*FLFRVS
Trigger: GGACACTCTGAATAAGAACAACCTGACAGAGCTGAA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTGTCCTTGGGGATCTaGCCCCCAGGTGCGGTCAGA +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYLSLGI*PPGAVR
Trigger: TCTGACCGCACCTGGGGGCAAGATCCCCAAGGACAA...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTTTGCCCATCATGATCTaGGCCGCCTTCCAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPLPIMI*AAFQLL
Trigger: CAAGAGCTGGAAGGCGGCCAAGATCATGATGGGCAA...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp TTTGTACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATCCGGGACAGCTTCTCTaGTGCCTCTGCCAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: FVHGTLIDVLGLHAVHRNPGQLL*CLCQLC
Trigger: GCAGAGCTGGCAGAGGCACAAGAGAAGCTGTCCCGG...ATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGTACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTTAAGTTCGGCAATCTaGTTTTTGATCCGGGACAGC +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVLSSAI*FLIRDS
Trigger: GCTGTCCCGGATCAAAAACAAGATTGCCGAACTTAA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp GTTAAAGGTCCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACGTGGCATCGGCCTCTaGCTGACACTTGATTTTCTC +
Preference number: 5 (lower is better)
Translates to: VKGPDIGGAADACFVHGTRGIGL*LTLDFL
Trigger: GAGAAAATCAAGTGTCAGCAAGAGGCCGATGCCACG...TGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGGACCTTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp GCAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTGGTACTCCACCTCCTaGTCACCGATCTTAATGTAC +
Preference number: 5 (lower is better)
Translates to: AAPRLPGSTSLPSLWSSSWYSTS*SPILMY
Trigger: GTACATTAAGATCGGTGACAAGGAGGTGGAGTACCA...ACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp GTTAAAGGTCCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACATGTGGGTTGAAGTACTaGGTGTGTAGGATCAGGCGG +
Preference number: 5 (lower is better)
Translates to: VKGPDIGGAADACFVHGTCGLKY*VCRIRR
Trigger: CCGCCTGATCCTACACACCAAGTACTTCAACCCACA...TGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGGACCTTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGCGCTGCTTCACCTCGTaGGCAGGGGTGGTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRRCFTS*AGVVLW
Trigger: CCAGAGGACCACCCCTGCCAACGAGGTGAAGCAGCG...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp GTTAAAGGTCCAGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACAGCCAGGAAAATGAGTTaGTCCCTCTCGAAGAGTCCC +
Preference number: 5 (lower is better)
Translates to: VKGPDIGGAADACFVHGTARKMS*SLSKSP
Trigger: GGGACTCTTCGAGAGGGACAAACTCATTTTCCTGGC...TGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCTGGACCTTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTCACTGTCCAGATTTTaGAACTCATCCATCTCCGAG +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVSLSRF*NSSISE
Trigger: CTCGGAGATGGATGAGTTCAAAAATCTGGACAGTGA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp GCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTAAAGGTCCAGCGGCCTTCCACGAACTaGCTGCCCATCTTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: AARIHFAAFSLVFKLKVQRPSTN*LPIFSS
Trigger: GGAGGAAAAGATGGGCAGCAAGTTCGTGGAAGGCCG...CTGGACCTTTAACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGTTCGCTGCCTTCTCTTaGGTCTTCAAGTTAAAGGTC +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVFAAFS*VFKLKV
Trigger: GACCTTTAACTTGAAGACCAAAGAGAAGGCAGCGAA...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS TCA 90 bp GCATTCCCCCGGGGAGACTCCAGGATGCGATTAATCCTGCAGATGTaGGCCACGGCGTCCTCAAACAGCACCAAATTCATGACTGCATTA +
Preference number: 5 (lower is better)
Translates to: AFPRGDSRMRLILQM*ATASSNSTKFMTAL
Trigger: TAATGCAGTCATGAATTTGGTGCTGTTTGAGGACGCCGTGGCTCACATCTGCAGGATTAATCGCATCCTGGAGTCTCCCCGGGGGAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CCA 90 bp CACTCCGGCCTTAAAAGGGAACCGCAGGAGGAAATCCAGCTCCACTaGGTTCAGCTCCTTCTTCATGGACAGGACCTGAAACGTAACTTG +
Preference number: 5 (lower is better)
Translates to: HSGLKREPQEEIQLH*VQLLLHGQDLKRNL
Trigger: CAAGTTACGTTTCAGGTCCTGTCCATGAAGAAGGAGCTGAACCCAGTGGAGCTGGATTTCCTCCTGCGGTTCCCTTTTAAGGCCGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000590227.5
ENST00000591369.5
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTGTCATCTCGATGATTaGGTTGCAGAACTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSCHLDD*VAELLQ
Trigger: CTGCAGGAGTTCTGCAACCAAATCATCGAGATGACA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCAAGGAAACTCAGAGATTaGCGAATGAACTGGTCAAAT +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEARKLRD*RMNWSN
Trigger: ATTTGACCAGTTCATTCGCAAATCTCTGAGTTTCCT...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATAGGGGCTCAAACATGTaGTCGGTGGCTGCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYRGSNM*SVAACL
Trigger: GAGGCAAGCAGCCACCGACAACATGTTTGAGCCCCT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATAGCACCTCGCTGGACTaGAGCATCATGGTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYSTSLD*SIMVPV
Trigger: GACAGGCACCATGATGCTCAAGTCCAGCGAGGTGCT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCAGGTACAGAATCGTTaGGATCACCGTGATCTCCGG +
Preference number: 5 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPQVQNR*DHRDLR
Trigger: CCGGAGATCACGGTGATCCAAACGATTCTGTACCTG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTAGTTCCGTTCTCTTCTaGGCCAGCAGGTTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPSSVLF*ASRFWY
Trigger: GTACCAGAACCTGCTGGCCAAGAAGAGAACGGAACT...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTCCAGCTCTTGTCCTaGGGGATCTTGCCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYFQLLS*GILPPG
Trigger: ACCTGGGGGCAAGATCCCCAAGGACAAGAGCTGGAA...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAGGCCACCGCTCGGTGTaGCCCAGGATGGTGGCATTC +
Preference number: 5 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREGHRSV*PRMVAF
Trigger: GAATGCCACCATCCTGGGCAACACCGAGCGGTGGCC...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTTTGTTTTTGATCCACTaGATTCCTTGGAGCTGGGCG +
Preference number: 5 (lower is better)
Translates to: QRHGCQDPLRCLLFGLQVLFLIH*IPWSWA
Trigger: CGCCCAGCTCCAAGGAATCAAGTGGATCAAAAACAA...AACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCACTCCTGTATTTGTTTTaGATCCACTTGATTCCTTGG +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEALLYLF*IHLIPW
Trigger: CCAAGGAATCAAGTGGATCAAAAACAAATACAGGAG...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp TTTGTACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATCACAGCGGCCAAGAGTaGGTCCTCGAGTCCATCCCT +
Preference number: 5 (lower is better)
Translates to: FVHGTLIDVLGLHAVHRNHSGQE*VLESIP
Trigger: AGGGATGGACTCGAGGACCAACTCTTGGCCGCTGTG...ATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGTACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATATCTCGTCCGTCAGGTaGATCACCCGCTGCTTCACC +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYISSVR*ITRCFT
Trigger: GGTGAAGCAGCGGGTGATCAACCTGACGGACGAGAT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTTATGGAGTTTTCCATaGTCTATGGTAAACCCTAGT +
Preference number: 5 (lower is better)
Translates to: HRCTGEGLSCGPAPGSVGLWSFP*SMVNPS
Trigger: ACTAGGGTTTACCATAGACAATGGAAAACTCCATAA...GCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS TCA 90 bp TGCCGACCACCTGGATCAGTTGGTCTGCGCTCTCATTCTTCTGCTTaGGCTCAGCCTCCTGAATCGCCAACTTGGCTTTCAAATCATCCA +
Preference number: 5 (lower is better)
Translates to: CRPPGSVGLRSHSSA*AQPPESPTWLSNHP
Trigger: TGGATGATTTGAAAGCCAAGTTGGCGATTCAGGAGGCTGAGCTCAAGCAGAAGAATGAGAGCGCAGACCAACTGATCCAGGTGGTCGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CCA 90 bp TTCTTCAGCCTGTGGACCTGCTTCACGATGTCTTCCGAGACCACCTaGGGCCATCCAGCCATGTTCTCACTTTGGTTTAACAGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: FFSLWTCFTMSSETT*GHPAMFSLWFNREE
Trigger: CTCTTCTCTGTTAAACCAAAGTGAGAACATGGCTGGATGGCCCCAGGTGGTCTCGGAAGACATCGTGAAGCAGGTCCACAGGCTGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 90 bp AGGCGAGAAATCAAAGTACATATTTCTGAAGGTGTCTGTTACTCGTaGGGAGAGGTGCCTGGGGCTGTGGTGCGTGGCTGTTATTTGGCC +
Preference number: 5 (lower is better)
Translates to: RREIKVHISEGVCYS*GEVPGAVVRGCYLA
Trigger: GGCCAAATAACAGCCACGCACCACAGCCCCAGGCACCTCTCCCCACGAGTAACAGACACCTTCAGAAATATGTACTTTGATTTCTCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587177.1
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATCATCGTGAAGTCGGCTaGTTCCATCTCCTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYHREVG*FHLLQQ
Trigger: CTGCTGGAGGAGATGGAACAAGCCGACTTCACGATG...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATACGTTTTTCACGGTGTaGTCGAGCCCCACGAAGGCA +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYTFFTV*SSPTKA
Trigger: TGCCTTCGTGGGGCTCGACAACACCGTGAAAAACGT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGGACTCCTTCACGGCCTaGTCCACGATGTTGCGGACC +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRDSFTA*STMLRT
Trigger: GGTCCGCAACATCGTGGACAAGGCCGTGAAGGAGTC...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTACTGGCGTGATCTTCTaGAACCCAAAGCGCAACTTG +
Preference number: 5 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPTGVIF*NPKRNL
Trigger: CAAGTTGCGCTTTGGGTTCAAGAAGATCACGCCAGT...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGAGTGGCAGAAGATATTaGGCTTGGCAAATAAGAGTT +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVSGRRY*AWQIRV
Trigger: AACTCTTATTTGCCAAGCCAAATATCTTCTGCCACT...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTCGATGGCCGTGCAGTaGACCACAGCTGGGAACTTT +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYSMAVQ*TTAGNF
Trigger: AAAGTTCCCAGCTGTGGTCAACTGCACGGCCATCGA...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAAGATCTGGGCGCTCTTaGGCCACCACAGCGGCCAAG +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERRSGRS*ATTAAK
Trigger: CTTGGCCGCTGTGGTGGCCAAAGAGCGCCCAGATCT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp ACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGGGCTGTGAGGCATTCTCTCTCGCTTCGTaGATTTTAACTTCTGTGATT +
Preference number: 5 (lower is better)
Translates to: TGEGLSCGPAPGSVGCEAFSLAS*ILTSVI
Trigger: AATCACAGAAGTTAAAATCAACGAAGCGAGAGAGAA...TGCCTCACAGCCCACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp GCAGCGCCACGGCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTACGGGGTTGATTTTGTaGAGATCGTTCAGTATGAAG +
Preference number: 5 (lower is better)
Translates to: AAPRLPGSTSLPSLWSSSTGLIL*RSFSMK
Trigger: CTTCATACTGAACGATCTCAACAAAATCAACCCCGT...ACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGCCGTGGCGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAGATCCCGCCCCAGCCTaGATGCTGGAGGAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERDPAPA*MLEEVH
Trigger: GTGGACTTCCTCCAGCATCAAGGCTGGGGCGGGATC...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGATGGTGAGGTCCCCGTaGTTGAAGGGGTACGACCGG +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRMVRSP*LKGYDR
Trigger: CCGGTCGTACCCCTTCAACAACGGGGACCTCACCAT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTATGATCTCAGCCATGTaGAAAGTCTCCGGAATCTTC +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSMISAM*KVSGIF
Trigger: GAAGATTCCGGAGACTTTCAACATGGCTGAGATCAT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS CCA 90 bp TTCCAACATGTTTCCCGAGTGTCATTCATGCCAAGGGACTTGACTTaGGGTCGCATGGAGGAGATGATGTTCTCCACCTCGTCCTCCATA +
Preference number: 5 (lower is better)
Translates to: FQHVSRVSFMPRDLT*GRMEEMMFSTSSSI
Trigger: TATGGAGGACGAGGTGGAGAACATCATCTCCTCCATGCGACCCCAAGTCAAGTCCCTTGGCATGAATGACACTCGGGAAACATGTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGGGGCCATTGTCATCTaGGCCTTTCCTTACACTGTG +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYGAIVI*AFPYTV
Trigger: CACAGTGTAAGGAAAGGCCAAGATGACAATGGCCCC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATATCAGCTTGCTCCACTaGTCCGGCTTGAACTTCAGG +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYISLLH*SGLNFR
Trigger: CCTGAAGTTCAAGCCGGACAAGTGGAGCAAGCTGAT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATTGACGTGGATGAGGTaGCTAGCGGCGTCCCGCAGA +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERLTWMR*LAASRR
Trigger: TCTGCGGGACGCCGCTAGCAACCTCATCCACGTCAA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTAATTTCTCGCACCTCTaGAATGTACTGAAACACACC +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSNFSHL*NVLKHT
Trigger: GGTGTGTTTCAGTACATTCAAGAGGTGCGAGAAATT...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGGCGGAGATGCTCTTTaGTTGCTTATTCAGGGACTT +
Preference number: 5 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPGGDAL*LLIQGL
Trigger: AAGTCCCTGAATAAGCAACAAAAGAGCATCTCCGCC...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATTGGCCACGATCATTTaGGCCACCACGTCCCGTGCG +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERLATII*ATTSRA
Trigger: CGCACGGGACGTGGTGGCCAAAATGATCGTGGCCAA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp AGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTGTGATAGTCTTGAATTCGTaGATCCACCATTTACTGAAC +
Preference number: 5 (lower is better)
Translates to: SHRCTGEGLSCGPAPGSVIVLNS*IHHLLN
Trigger: GTTCAGTAAATGGTGGATCAACGAATTCAAGACTAT...CACACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTTCAGGCTTTCCAGCTaGTCCCCCATCAGCACCGAC +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRFRLSS*SPISTD
Trigger: GTCGGTGCTGATGGGGGACAAGCTGGAAAGCCTGAA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGAAGCTGATGGAGGCCTaGACTTCCCACGGAATCCCC +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRKLMEA*TSHGIP
Trigger: GGGGATTCCGTGGGAAGTCAAGGCCTCCATCAGCTT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGACCACCTGGATCAGTaGGTCTGCGCTCTCATTCTT +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYDHLDQ*VCALIL
Trigger: AAGAATGAGAGCGCAGACCAACTGATCCAGGTGGTC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGAGGGCCGGTTCTGCTTaGGCCAGGTCTGTTTCACAG +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRRAGSA*ARSVSQ
Trigger: CTGTGAAACAGACCTGGCCAAAGCAGAACCGGCCCT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATTGTCCTTGGGGATCTaGCCCCCAGGTGCGGTCAGA +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERLSLGI*PPGAVR
Trigger: TCTGACCGCACCTGGGGGCAAGATCCCCAAGGACAA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAAGGATCAGGCGGAACTaGGGGTGGTACTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRERIRRN*GWYSTS
Trigger: GGAGGTGGAGTACCACCCCAAGTTCCGCCTGATCCT...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp GCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTAAAGGTCCAGTTCTCAAACACCACGTaGAAGGCCTTGAGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: AARIHFAAFSLVFKLKVQFSNTT*KALREN
Trigger: GTTCTCCCTCAAGGCCTTCAACGTGGTGTTTGAGAA...CTGGACCTTTAACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGATCTCGTCCGTCAGGTaGATCACCCGCTGCTTCACC +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRISSVR*ITRCFT
Trigger: GGTGAAGCAGCGGGTGATCAACCTGACGGACGAGAT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGCGAAGAGCATGCACTaGAACTCCATCTCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYAKSMH*NSISLV
Trigger: CACCAAGGAGATGGAGTTCAAGTGCATGCTCTTCGC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGAACGGCGCATTTCGTaGGTCAGGATGTTCATTCTT +
Preference number: 5 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPERRIS*VRMFIL
Trigger: AAGAATGAACATCCTGACCAACGAAATGCGCCGTTC...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp GCTGCCAGGATCCACTTCGCTGCCTTCTCTTTGGTCTTCAAGTTAAAGGTCCAGTCCTCTCGGTTTTTCTaGGTCACCTCGACAGACAGA +
Preference number: 5 (lower is better)
Translates to: AARIHFAAFSLVFKLKVQSSRFF*VTSTDR
Trigger: TCTGTCTGTCGAGGTGACCAAGAAAAACCGAGAGGA...CTGGACCTTTAACTTGAAGACCAAAGAGAAGGCAGCGAAGTGGATCCTGGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCTGGTTCCGATGTGCTaGGTTACAAAGCACCTGATT +
Preference number: 5 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPLVPMC*VTKHLI
Trigger: AATCAGGTGCTTTGTAACCAAGCACATCGGAACCAG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS TCA 90 bp GATGAGCTCCAGGTTGCCCACAAACTTCCGGAAAGTTTCGTTCTCTaGGAACAGACTCTCCGCACTGTCTGGAATCTCTTTCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: DELQVAHKLPESFVL*EQTLRTVWNLFLLL
Trigger: CAGCAACAGAAAGAGATTCCAGACAGTGCGGAGAGTCTGTTCTCAGAGAACGAAACTTTCCGGAAGTTTGTGGGCAACCTGGAGCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS GCA 90 bp GGGGATGGTGTCATCTGTCCAGGTGTCCAAGTCCTCCGCAGTGACTaGACACCCATATATCAGGAAATTCTTCATAAACTCCTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: GDGVICPGVQVLRSD*TPIYQEILHKLLQV
Trigger: AACCTGCAGGAGTTTATGAAGAATTTCCTGATATATGGGTGTGCAGTCACTGCGGAGGACTTGGACACCTGGACAGATGACACCATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 90 bp TTCTCAGTGACGTTCTTATTGATGACCTCGACCTTGACTTCTTCCTaGTCAGCAATGGCCTTCTCTTTGCTGACCTTCTCGGCCTCGATG +
Preference number: 5 (lower is better)
Translates to: FSVTFLLMTSTLTSS*SAMAFSLLTFSASM
Trigger: CATCGAGGCCGAGAAGGTCAGCAAAGAGAAGGCCATTGCTGACCAGGAAGAAGTCAAGGTCGAGGTCATCAATAAGAACGTCACTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS-3UTR CAA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTAGCAAGGTTTTGCCTTaGATCTTGCCACTCATCACA +
Preference number: 5 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPSKVLP*ILPLIT
Trigger: TGTGATGAGTGGCAAGATCAAAGGCAAAACCTTGCT...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACAGCCGTGGAACACCTaGGTGTTCTCGCACTTGGAC +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERQPWNT*VFSHLD
Trigger: GTCCAAGTGCGAGAACACCAAGGTGTTCCACGGCTG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTTGCTTGAGCTCGAATaGCTGGCATTTCCGCCGCAG +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRLLELE*LAFPPQ
Trigger: CTGCGGCGGAAATGCCAGCAATTCGAGCTCAAGCAA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGACGGGGTCATTGCCATaGGAGAGAATGTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRTGSLP*ERMSRR
Trigger: CCTCCTGGACATTCTCTCCAATGGCAATGACCCCGT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGACAATCTTGGGGATGTaGAAGTCTCTCAGCGCCCGC +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRTILGM*KSLSAR
Trigger: GCGGGCGCTGAGAGACTTCAACATCCCCAAGATTGT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTCCACGATGCTCTGCTaGATGATCTTTTCAAAATTC +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSSTMLC*MIFSKF
Trigger: GAATTTTGAAAAGATCATCAAGCAGAGCATCGTGGA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTCCCTGGTCACTGGGTaGATGATGCCAAAGAGCTCG +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRSLVTG*MMPKSS
Trigger: CGAGCTCTTTGGCATCATCAACCCAGTGACCAGGGA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATAGGGTGAGGACCTTGTaGTCATCCATGACTGTGTTG +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYRVRTL*SSMTVL
Trigger: CAACACAGTCATGGATGACAACAAGGTCCTCACCCT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp ATAAGTCACAGGTGCACAGGTGAAGGGCTGAGTTGTGGTCCAGCCCCAGGGAGTTTTTCGTCAACCATTTaGTCACCATACACTCGTTCA +
Preference number: 5 (lower is better)
Translates to: ISHRCTGEGLSCGPAPGSFSSTI*SPYTRS
Trigger: TGAACGAGTGTATGGTGACAAAATGGTTGACGAAAA...ACTCCCTGGGGCTGGACCACAACTCAGCCCTTCACCTGTGCACCTGTGACTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAACGTCCACGAGGAGCTaGTTCAGAGGAGCCATGTCG +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERTSTRS*FRGAMS
Trigger: CGACATGGCTCCTCTGAACAAGCTCCTCGTGGACGT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTTCATGCCAAGGGACTaGACTTGGGGTCGCATGGAG +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRFMPRD*TWGRME
Trigger: CTCCATGCGACCCCAAGTCAAGTCCCTTGGCATGAA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAGAACGTCGGGTTGCCTaGGTAGGGCTTGAAGGCCTT +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERERRVA*VGLEGL
Trigger: AAGGCCTTCAAGCCCTACCAAGGCAACCCGACGTTC...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTTTAAGTTCGGCAATCTaGTTTTTGATCCGGGACAGC +
Preference number: 5 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPLSSAI*FLIRDS
Trigger: GCTGTCCCGGATCAAAAACAAGATTGCCGAACTTAA...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATAACGCTGAGGTTAGGTaGCTCAGGTTGGCGTTAAGT +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYNAEVR*LRLALS
Trigger: ACTTAACGCCAACCTGAGCAACCTAACCTCAGCGTT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGGCCTTCCACGAACTaGCTGCCCATCTTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRERPSTN*LPIFSS
Trigger: GGAGGAAAAGATGGGCAGCAAGTTCGTGGAAGGCCG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS GCA 90 bp TTCACATTCTTGAAAGGCGACTACCACGTAGGGGGTCTTTTCCGCTaGCTTTGCCATGATCTCAGCCATGTTGAAAGTCTCCGGAATCTT +
Preference number: 5 (lower is better)
Translates to: FTFLKGDYHVGGLFR*LCHDLSHVESLRNL
Trigger: AAGATTCCGGAGACTTTCAACATGGCTGAGATCATGGCAAAGGCAGCGGAAAAGACCCCCTACGTGGTAGTCGCCTTTCAAGAATGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000586850.1
ENST00000590227.5
ENST00000591369.5
ENST00000592192.2
CDS CCA 90 bp CGAGGAGCTTGTTCAGAGGAGCCATGTCGGTTACAGGAACATATTTaGGATCGCCAATCCCTTGAGCAAAGTGGCAGAAGATATTTGGCT +
Preference number: 5 (lower is better)
Translates to: RGACSEEPCRLQEHI*DRQSLEQSGRRYLA
Trigger: AGCCAAATATCTTCTGCCACTTTGCTCAAGGGATTGGCGATCCCAAATATGTTCCTGTAACCGACATGGCTCCTCTGAACAAGCTCCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATATAGGCAGCAAGGTTTaGCCTTTGATCTTGCCACTC +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYIGSKV*PLILPL
Trigger: GAGTGGCAAGATCAAAGGCAAAACCTTGCTGCCTAT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGCTTTCAAACAGCGGGTaGGCCGACCAGTCCTTCATA +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRLSNSG*ADQSFI
Trigger: TATGAAGGACTGGTCGGCCAACCCGCTGTTTGAAAG...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTTGGTGTTCTCGCACTaGGACACCTCCTCATACAGC +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRLVFSH*DTSSYS
Trigger: GCTGTATGAGGAGGTGTCCAAGTGCGAGAACACCAA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGGCCTTGAATTCCTGGTaGATGTCGTCAAAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRALNSW*MSSKRW
Trigger: CCAGCGCTTTGACGACATCAACCAGGAATTCAAGGC...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAATGTACTCGTCCTCCTaGCTGTACATTCCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREMYSSS*LYIPRP
Trigger: GGGCCTGGGAATGTACAGCAAGGAGGACGAGTACAT...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAATCAAGGATGATCCACTaGGGGCCGTCATGGGTGATG +
Preference number: 5 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRESRMIH*GPSWVM
Trigger: CATCACCCATGACGGCCCCAAGTGGATCATCCTTGA...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAGAGGCCAGCAGGTCATaGATCAGCACCAGAAACTGC +
Preference number: 5 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREEASRS*ISTRNC
Trigger: GCAGTTTCTGGTGCTGATCAATGACCTGCTGGCCTC...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATAAACACAGGATCACCTaGAGCTGTCTGCGCACTTTT +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYKHRIT*SCLRTF
Trigger: AAAAGTGCGCAGACAGCTCAAGGTGATCCTGTGTTT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATCGATGGCCGTGCAGTaGACCACAGCTGGGAACTTT +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERSMAVQ*TTAGNF
Trigger: AAAGTTCCCAGCTGTGGTCAACTGCACGGCCATCGA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAAGGAAGGTGTCCACCTaGCCCATCATGATCTTGGCC +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERRKVST*PIMILA
Trigger: GGCCAAGATCATGATGGGCAAGGTGGACACCTTCCT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTCGGCAATCTTGTTTTaGATCCGGGACAGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYSAILF*IRDSFS
Trigger: AGAGAAGCTGTCCCGGATCAAAAACAAGATTGCCGA...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp TTTGTACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATGTTAGGTTGCTCAGGTaGGCGTTAAGTTCGGCAATC +
Preference number: 5 (lower is better)
Translates to: FVHGTLIDVLGLHAVHRNVRLLR*ALSSAI
Trigger: GATTGCCGAACTTAACGCCAACCTGAGCAACCTAAC...ATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGTACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACCGAGTCCGTCTCTTTaGGCTGCATTTCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERPSPSL*AAFPGQ
Trigger: CTGTCCTGGAAATGCAGCCAAAAGAGACGGACTCGG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGAACGGCGCATTTCGTaGGTCAGGATGTTCATTCTT +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYERRIS*VRMFIL
Trigger: AAGAATGAACATCCTGACCAACGAAATGCGCCGTTC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGGCAGTCATCAAATCCTaGGCAAAAGATCGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRAVIKS*AKDRGQ
Trigger: CTGGCCACGATCTTTTGCCAAGGATTTGATGACTGC...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAACGATGAGCTCCAGGTaGCCCACAAACTTCCGGAAA +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERTMSSR*PTNFRK
Trigger: TTTCCGGAAGTTTGTGGGCAACCTGGAGCTCATCGT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTTCTGCAACCATGGCTaGGATCTTCACTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRFCNHG*DLHSSI
Trigger: GATGCTGGAGTGAAGATCCAAGCCATGGTTGCAGAA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAGTTGTCGGTGGCTGCTaGCCTCTCCTTGACTTTCAT +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERVVGGC*PLLDFH
Trigger: ATGAAAGTCAAGGAGAGGCAAGCAGCCACCGACAAC...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATAGGTTCTGGTACAGTTaGATCTGCTCCAGAAAGGTT +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYRFWYS*ICSRKV
Trigger: AACCTTTCTGGAGCAGATCAAACTGTACCAGAACCT...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAAGTTCCGTTCTCTTCTaGGCCAGCAGGTTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRESSVLF*ASRFWY
Trigger: GTACCAGAACCTGCTGGCCAAGAAGAGAACGGAACT...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAATCAGGGATGTGCTCCTaGTCGAACTTCTTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRESGMCS*SNFFRE
Trigger: CTCCCTGAAGAAGTTCGACAAGGAGCACATCCCTGA...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGAACGCTGAGGTTAGGTaGCTCAGGTTGGCGTTAAGT +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRNAEVR*LRLALS
Trigger: ACTTAACGCCAACCTGAGCAACCTAACCTCAGCGTT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp ACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATGGCCTCTCCTGTATTTGTTTTaGATCCACTTGATTCCTTGG +
Preference number: 5 (lower is better)
Translates to: TRDTHRCSWSPCGPQEWPLLYLF*IHLIPW
Trigger: CCAAGGAATCAAGTGGATCAAAAACAAATACAGGAG...AGGCCATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAATTGAACTCCATCTCCTaGGTGCACATCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRELNSIS*VHISRV
Trigger: CACCCTGGAGATGTGCACCAAGGAGATGGAGTTCAA...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACTCCCTGAACTCATGTaGCTTGAGCTCGAATTGCTG +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERLPELM*LELELL
Trigger: CAGCAATTCGAGCTCAAGCAACATGAGTTCAGGGAG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGATAGGAATACTGGATTaGGGCATCGCAGATGTTGGC +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRIGILD*GIADVG
Trigger: GCCAACATCTGCGATGCCCAAATCCAGTATTCCTAT...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTTTCTTGGCCCGAATaGCATCCTGGACACATTTTA +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYFSWPE*HPGHIL
Trigger: TAAAATGTGTCCAGGATGCAATTCGGGCCAAGAAAA...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACCCTGCGAGGGGAACTaGATAGTCTTGAATTCGTTG +
Preference number: 5 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREPCEGN*IVLNSL
Trigger: CAACGAATTCAAGACTATCAAGTTCCCCTCGCAGGG...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTCATCAAAGAACTTCTaGGTGGAGGCCATGGTGACT +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRSSKNF*VEAMVT
Trigger: AGTCACCATGGCCTCCACCAAGAAGTTCTTTGATGA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTCAGAAGATATTTGGCTaGGCAAATAAGAGTTCATCA +
Preference number: 5 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPQKIFG*ANKSSS
Trigger: TGATGAACTCTTATTTGCCAAGCCAAATATCTTCTG...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATTGATGACCTCGACCTaGACTTCTTCCTGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERLMTST*TSSWSA
Trigger: TGCTGACCAGGAAGAAGTCAAGGTCGAGGTCATCAA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CTTCCACACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTAATCTTAAATTCGTTTaGAGACTTGGTGAGGTTTGC +
Preference number: 5 (lower is better)
Translates to: LPHQPPPSGSDVLGYKAPNLKFV*RLGEVC
Trigger: GCAAACCTCACCAAGTCTCAAAACGAATTTAAGATT...AGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTGTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATGACCTGAAACGTAACTaGTGCCAGGAAAATGAGTTT +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYDLKRN*CQENEF
Trigger: AAACTCATTTTCCTGGCACAAGTTACGTTTCAGGTC...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp TTTGTACACGGGACACTCATAGATGTTCTTGGTCTCCATGCGGTCCACAGGAATTCACTGTCCAGATTTTaGAACTCATCCATCTCCGAG +
Preference number: 5 (lower is better)
Translates to: FVHGTLIDVLGLHAVHRNSLSRF*NSSISE
Trigger: CTCGGAGATGGATGAGTTCAAAAATCTGGACAGTGA...ATTCCTGTGGACCGCATGGAGACCAAGAACATCTATGAGTGTCCCGTGTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp AGACATAGGTGGGGCCGCGGATGCGTGTTTTGTACACGGGACACTCATAGATGTTTATGGAGTTTTCCATaGTCTATGGTAAACCCTAGT +
Preference number: 5 (lower is better)
Translates to: RHRWGRGCVFCTRDTHRCLWSFP*SMVNPS
Trigger: ACTAGGGTTTACCATAGACAATGGAAAACTCCATAA...ACATCTATGAGTGTCCCGTGTACAAAACACGCATCCGCGGCCCCACCTATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS-3UTR CAA 90 bp CACCAACCTCCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATCATTCTTTCACATTCTaGAAAGGCGACTACCACGTA +
Preference number: 5 (lower is better)
Translates to: HQPPPSGSDVLGYKAPDYHSFTF*KGDYHV
Trigger: TACGTGGTAGTCGCCTTTCAAGAATGTGAAAGAATG...ATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGGAGGTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAATCCTCTCGGTTTTTCTaGGTCACCTCGACAGACAGA +
Preference number: 5 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRESSRFF*VTSTDR
Trigger: TCTGTCTGTCGAGGTGACCAAGAAAAACCGAGAGGA...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS TCA 90 bp GGAGCCATGTCGGTTACAGGAACATATTTGGGATCGCCAATCCCTTaGGCAAAGTGGCAGAAGATATTTGGCTTGGCAAATAAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: GAMSVTGTYLGSPIP*AKWQKIFGLANKSS
Trigger: TGAACTCTTATTTGCCAAGCCAAATATCTTCTGCCACTTTGCTCAAGGGATTGGCGATCCCAAATATGTTCCTGTAACCGACATGGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS GCA 90 bp AATCACGGTCAAAATTCGAGTCTCCAGGGTCCAAGGGATCATATTTaGAGTCGGCAAAAACCTTCACCAGCTCAAAGACCTCATCATAGA +
Preference number: 5 (lower is better)
Translates to: NHGQNSSLQGPRDHI*SRQKPSPAQRPHHR
Trigger: TCTATGATGAGGTCTTTGAGCTGGTGAAGGTTTTTGCCGACTGCAAATATGATCCCTTGGACCCTGGAGACTCGAATTTTGACCGTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS CCA 90 bp TCTGAGAACAGACTCTCCGCACTGTCTGGAATCTCTTTCTGTTGCTaGAAATTCAAATACTTGACTTCTCTCAGAACTGCCACCAACGCT +
Preference number: 5 (lower is better)
Translates to: SENRLSALSGISFCC*KFKYLTSLRTATNA
Trigger: AGCGTTGGTGGCAGTTCTGAGAGAAGTCAAGTATTTGAATTTCCAGCAACAGAAAGAGATTCCAGACAGTGCGGAGAGTCTGTTCTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTCCAAGGGATCATATTaGCAGTCGGCAAAAACCTTC +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRSKGSY*QSAKTF
Trigger: GAAGGTTTTTGCCGACTGCAAATATGATCCCTTGGA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAAACGCTTTGCTGAAGTaGACGTGGATGAGGTTGCTA +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERNALLK*TWMRLL
Trigger: TAGCAACCTCATCCACGTCAACTTCAGCAAAGCGTT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACTGAACTCATGTTGCTaGAGCTCGAATTGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERLNSCC*SSNCWH
Trigger: ATGCCAGCAATTCGAGCTCAAGCAACATGAGTTCAG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATCGGCAATCTTGTTTTaGATCCGGGACAGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERSAILF*IRDSFS
Trigger: AGAGAAGCTGTCCCGGATCAAAAACAAGATTGCCGA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATTGTTTTTGATCCACTaGATTCCTTGGAGCTGGGCG +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERLFLIH*IPWSWA
Trigger: CGCCCAGCTCCAAGGAATCAAGTGGATCAAAAACAA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGACTGGTTCCGATGTGCTaGGTTACAAAGCACCTGATT +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERLVPMC*VTKHLI
Trigger: AATCAGGTGCTTTGTAACCAAGCACATCGGAACCAG...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS TCA 90 bp TGTCCTTGGCAAACTTCTTACAATCTATGTCCATCTGCTCAACGTTaGTATCTTTCCACTTGGTGGTCTTCCAGTCCTCGATGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: CPWQTSYNLCPSAQR*YLSTWWSSSPRCWY
Trigger: ATACCAGCATCGAGGACTGGAAGACCACCAAGTGGAAAGATATCAACGTTGAGCAGATGGACATAGATTGTAAGAAGTTTGCCAAGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 90 bp AAGAACTTCTTGGTGGAGGCCATGGTGACTCTATGCAATGTTTCCTaGTCTTTTTCGTCAACCATTTTGTCACCATACACTCGTTCAGTC +
Preference number: 5 (lower is better)
Translates to: KNFLVEAMVTLCNVS*SFSSTILSPYTRSV
Trigger: GACTGAACGAGTGTATGGTGACAAAATGGTTGACGAAAAAGACCAGGAAACATTGCATAGAGTCACCATGGCCTCCACCAAGAAGTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGCCTCCTATCCAGGTCTaGGATTTTGATCTCAAAATC +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRPPIQV*DFDLKI
Trigger: GATTTTGAGATCAAAATCCAAGACCTGGATAGGAGG...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAATCAGTGACGTTCTTATaGATGACCTCGACCTTGACT +
Preference number: 5 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRESVTFL*MTSTLT
Trigger: AGTCAAGGTCGAGGTCATCAATAAGAACGTCACTGA...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATTCAGCTCTGTCAGGTaGTTCTTATTCAGAGTGTCC +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERFSSVR*FLFRVS
Trigger: GGACACTCTGAATAAGAACAACCTGACAGAGCTGAA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS GCA 90 bp CCAAGATCATCAAAGAACTTCTTGGTGGAGGCCATGGTGACTCTATaGAATGTTTCCTGGTCTTTTTCGTCAACCATTTTGTCACCATAC +
Preference number: 5 (lower is better)
Translates to: PRSSKNFLVEAMVTL*NVSWSFSSTILSPY
Trigger: GTATGGTGACAAAATGGTTGACGAAAAAGACCAGGAAACATTGCATAGAGTCACCATGGCCTCCACCAAGAAGTTCTTTGATGATCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 90 bp ATACACACACAGAGTAACAGGTTGCATAAGGGCCCTGCAGTGTCATaGTTGGGTTGTGGAATTACAGGTAAATTCTCCTTCTTTTCAAGA +
Preference number: 5 (lower is better)
Translates to: IHTQSNRLHKGPAVS*LGCGITGKFSFFSR
Trigger: TCTTGAAAAGAAGGAGAATTTACCTGTAATTCCACAACCCAAGCATGACACTGCAGGGCCCTTATGCAACCTGTTACTCTGTGTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587177.1
CDS CCA 90 bp TGGGATCGCCAATCCCTTGAGCAAAGTGGCAGAAGATATTTGGCTTaGCAAATAAGAGTTCATCACCAAGATCATCAAAGAACTTCTTGG +
Preference number: 5 (lower is better)
Translates to: WDRQSLEQSGRRYLA*QIRVHHQDHQRTSW
Trigger: CCAAGAAGTTCTTTGATGATCTTGGTGATGAACTCTTATTTGCCAAGCCAAATATCTTCTGCCACTTTGCTCAAGGGATTGGCGATCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 90 bp ACACACAGAGTAACAGGTTGCATAAGGGCCCTGCAGTGTCATGCTTaGGTTGTGGAATTACAGGTAAATTCTCCTTCTTTTCAAGATGAT +
Preference number: 5 (lower is better)
Translates to: THRVTGCIRALQCHA*VVELQVNSPSFQDD
Trigger: ATCATCTTGAAAAGAAGGAGAATTTACCTGTAATTCCACAACCCAAGCATGACACTGCAGGGCCCTTATGCAACCTGTTACTCTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587177.1
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATACAAGATCTTAGCATaGTCTAGCTCAGCGTCAAAC +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERYKILA*SSSASN
Trigger: GTTTGACGCTGAGCTAGACAATGCTAAGATCTTGTA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGTGGAAATTCAAATACTaGACTTCTCTCAGAACTGCC +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRWKFKY*TSLRTA
Trigger: GGCAGTTCTGAGAGAAGTCAAGTATTTGAATTTCCA...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAAGGGCAGGAACTTTTTaGTGTCAGGATCAATGTAGT +
Preference number: 5 (lower is better)
Translates to: PPSGSDVLGYKAPDYLRERAGTF*CQDQCS
Trigger: ACTACATTGATCCTGACACAAAAAAGTTCCTGCCCT...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAACGGGGTTGATTTTGTaGAGATCGTTCAGTATGAAG +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERTGLIL*RSFSMK
Trigger: CTTCATACTGAACGATCTCAACAAAATCAACCCCGT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS-3UTR CAA 90 bp CCACCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAAGACCTGAAACGTAACTaGTGCCAGGAAAATGAGTTT +
Preference number: 5 (lower is better)
Translates to: PPSGSDVLGYKAPDYLREDLKRN*CQENEF
Trigger: AAACTCATTTTCCTGGCACAAGTTACGTTTCAGGTC...TTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000591369.5
CDS TCA 90 bp GTTCATCACCAAGATCATCAAAGAACTTCTTGGTGGAGGCCATGGTaGCTCTATGCAATGTTTCCTGGTCTTTTTCGTCAACCATTTTGT +
Preference number: 5 (lower is better)
Translates to: VHHQDHQRTSWWRPW*LYAMFPGLFRQPFC
Trigger: ACAAAATGGTTGACGAAAAAGACCAGGAAACATTGCATAGAGTCACCATGGCCTCCACCAAGAAGTTCTTTGATGATCTTGGTGATGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp GAGAACGAAAAACCACCACCAGTTCCTGTAAAGAATAAGTCACAGGTGCACAGGGCTTCAGAAACTCAATaGCTGTTTTATAGAGTTCCT +
Preference number: 5 (lower is better)
Translates to: ENEKPPPVPVKNKSQVHRASETQ*LFYRVP
Trigger: AGGAACTCTATAAAACAGCAATTGAGTTTCTGAAGC...CCTGTGCACCTGTGACTTATTCTTTACAGGAACTGGTGGTGGTTTTTCGTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGAAAAGACCTCATGTCCTaGGCAAACTTCTTACAATCT +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERKDLMS*ANFLQS
Trigger: AGATTGTAAGAAGTTTGCCAAGGACATGAGGTCTTT...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS-3UTR CAA 90 bp CCCTCTGGTTCCGATGTGCTTGGTTACAAAGCACCTGATTATTTAAGAGAACGATCATCTATAACCATGTaGTCCATTAGGAAACTCAGA +
Preference number: 5 (lower is better)
Translates to: PSGSDVLGYKAPDYLRERSSITM*SIRKLR
Trigger: TCTGAGTTTCCTAATGGACAACATGGTTATAGATGA...TCGTTCTCTTAAATAATCAGGTGCTTTGTAACCAAGCACATCGGAACCAGAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 90 bp CACCTTCGCCATTCCAGAATAATGTCGTTTCAGCGCTCAATAACTTaGCATCAATTGCTTCCAGTTCTGACTTTATTAGTAGAAATTCTA +
Preference number: 5 (lower is better)
Translates to: HLRHSRIMSFQRSIT*HQLLPVLTLLVEIL
Trigger: TAGAATTTCTACTAATAAAGTCAGAACTGGAAGCAATTGATGTCAAGTTATTGAGCGCTGAAACGACATTATTCTGGAATGGCGAAGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS GCA 72 bp CCCGCCCCGTCTAACCAGTGCCGGTGGTCCATGTGCTaGCGGATGAGGGTGTGCGGGGCCACCGTCCCATAC +
Preference number: 6 (lower is better)
Translates to: PAPSNQCRWSMC*RMRVCGATVPY
Trigger: GTATGGGACGGTGGCCCCGCACACCCTCATCCGGCAGCACATGGACCACCGGCACTGGTTAGACGGGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586052.5
CDS CCA 72 bp GCAGCAGGTCTGCGTACCAGGCCGCCAGGCCCATCATaGAGGGGTAGGCCCGGGCCACCCACGTATCAGGCA +
Preference number: 6 (lower is better)
Translates to: AAGLRTRPPGPS*RGRPGPPTYQA
Trigger: TGCCTGATACGTGGGTGGCCCGGGCCTACCCCTCCATGATGGGCCTGGCGGCCTGGTACGCAGACCTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000590227.5
ENST00000591369.5
ENST00000591647.1
CDS GCA 72 bp ATGAAGCCCCAGCGCCGGATTGTGCTGAGCAGGGCCTaGTTGAAGGGGCGGCAGTCGCACTGCAGCCAGCCG +
Preference number: 6 (lower is better)
Translates to: MKPQRRIVLSRA*LKGRQSHCSQP
Trigger: CGGCTGGCTGCAGTGCGACTGCCGCCCCTTCAAGCAGGCCCTGCTCAGCACAATCCGGCGCTGGGGCTTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 72 bp GCCAGGGCCGCGGCCACCAGCTGGCTGCTTATCCTCTaGATAGCCATGGAGACCGAGCGGAAGGCCAGGTGC +
Preference number: 6 (lower is better)
Translates to: ARAAATSWLLIL*IAMETERKARC
Trigger: GCACCTGGCCTTCCGCTCGGTCTCCATGGCTATCCAGAGGATAAGCAGCCAGCTGGTGGCCGCGGCCCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CAA 72 bp ATGCACCAGGAGCACAGGCCGGCGGCGGCCGTGGACTaGGAGCGGATGAACTCGGGGTCGAACGTCGGGTTG +
Preference number: 6 (lower is better)
Translates to: MHQEHRPAAAVD*ERMNSGSNVGL
Trigger: CAACCCGACGTTCGACCCCGAGTTCATCCGCTCCAAGTCCACGGCCGCCGCCGGCCTGTGCTCCTGGTGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS TCA 72 bp GACCAGGCCCTCGATCAGTGCCAGGAAGCCGCGATCTaGGCCCACCTCCAGGGTCGGGTTGAAGGTCAGCCC +
Preference number: 6 (lower is better)
Translates to: DQALDQCQEAAI*AHLQGRVEGQP
Trigger: GGGCTGACCTTCAACCCGACCCTGGAGGTGGGCTCAGATCGCGGCTTCCTGGCACTGATCGAGGGCCTGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 72 bp CCACGTCGCAGTAGACCTCGTAGAAGCGGACGATGTTaGTGCACCAGGAGCACAGGCCGGCGGCGGCCGTGG +
Preference number: 6 (lower is better)
Translates to: PRRSRPRRSGRC*CTRSTGRRRPW
Trigger: CCACGGCCGCCGCCGGCCTGTGCTCCTGGTGCATCAACATCGTCCGCTTCTACGAGGTCTACTGCGACGTGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS TCA 72 bp CAGGCCTCGAGTTCCTGCAAGGACACACGAGCCGCCTaGTGCGGAGCAGCAGGTCTGCGTACCAGGCCGCCA +
Preference number: 6 (lower is better)
Translates to: QASSSCKDTRAA*CGAAGLRTRPP
Trigger: TGGCGGCCTGGTACGCAGACCTGCTGCTCCGCATCAGGCGGCTCGTGTGTCCTTGCAGGAACTCGAGGCCTG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS GCA 72 bp CCAGGCCTCGAGTTCCCTGATGCGGAGCAGCAGGTCTaGGTACCAGGCCGCCAGGCCCATCATGGAGGGGTA +
Preference number: 6 (lower is better)
Translates to: PGLEFPDAEQQV*VPGRQAHHGGV
Trigger: TACCCCTCCATGATGGGCCTGGCGGCCTGGTACGCAGACCTGCTGCTCCGCATCAGGGAACTCGAGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000590227.5
ENST00000591647.1
CDS GCA 72 bp AGGACACACGAGCCGCCTGATGCGGAGCAGCAGGTCTaGGTACCAGGCCGCCAGGCCCATCATGGAGGGGTA +
Preference number: 6 (lower is better)
Translates to: RTHEPPDAEQQV*VPGRQAHHGGV
Trigger: TACCCCTCCATGATGGGCCTGGCGGCCTGGTACGCAGACCTGCTGCTCCGCATCAGGCGGCTCGTGTGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS TCA 72 bp CCACCACCGCGATCAGCTGGTCCACGGGTGTGGGGCTaGTGTCGCCGTAAAGGAGCCGGGCCCTGTAGTTGT +
Preference number: 6 (lower is better)
Translates to: PPPRSAGPRVWG*CRRKGAGPCSC
Trigger: ACAACTACAGGGCCCGGCTCCTTTACGGCGACATCAGCCCCACACCCGTGGACCAGCTGATCGCGGTGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 72 bp TGGGCGCCACCTCGGCAAGAATCAGGGGCCGCTCCATaGGGCCCCCACACATGTACAGGAGCTTTGCGGAGG +
Preference number: 6 (lower is better)
Translates to: WAPPRQESGAAP*GPHTCTGALRR
Trigger: CCTCCGCAAAGCTCCTGTACATGTGTGGGGGCCTCATGGAGCGGCCCCTGATTCTTGCCGAGGTGGCGCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS TCA 72 bp GGAAGCCGCGATCTGAGCCCACCTCCAGGGTCGGGTTaGAGGTCAGCCCATCCTCGTCCAGCTCCATGCGGA +
Preference number: 6 (lower is better)
Translates to: GSRDLSPPPGSG*RSAHPRPAPCG
Trigger: TCCGCATGGAGCTGGACGAGGATGGGCTGACCTTCAACCCGACCCTGGAGGTGGGCTCAGATCGCGGCTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 72 bp CCCCCGGGAGCTGGGTGCGGATGTCTTCGGAGCCGATaGAGATGCTCTCCAGGTGGCTCCAGGTTCGCTGGA +
Preference number: 6 (lower is better)
Translates to: PPGAGCGCLRSR*RCSPGGSRFAG
Trigger: TCCAGCGAACCTGGAGCCACCTGGAGAGCATCTTCATCGGCTCCGAAGACATCCGCACCCAGCTCCCGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000587177.1
CDS TCA 72 bp GCAGGGCAAAGTCTGTCGTCCAGGCCTCGAGTTCCCTaGTGCGGAGCAGCAGGTCTGCGTACCAGGCCGCCA +
Preference number: 6 (lower is better)
Translates to: AGQSLSSRPRVP*CGAAGLRTRPP
Trigger: TGGCGGCCTGGTACGCAGACCTGCTGCTCCGCATCAGGGAACTCGAGGCCTGGACGACAGACTTTGCCCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000590227.5
ENST00000591647.1
CDS GCA 72 bp AGCTGCTGCCAGTGGCGTTCCCGAATGGCAGGGTTCTaGAGCTCGCTCACGGCACGCAGGGACGTGATCACG +
Preference number: 6 (lower is better)
Translates to: SCCQWRSRMAGF*SSLTARRDVIT
Trigger: CGTGATCACGTCCCTGCGTGCCGTGAGCGAGCTGCAGAACCCTGCCATTCGGGAACGCCACTGGCAGCAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp GGGTGCAGCCCATCCAGCAGCGCCTGGGCTGAGTCTTaGCTCAGCACATCCCGGATCTGGTGGGACCAGTCG +
Preference number: 6 (lower is better)
Translates to: GCSPSSSAWAES*LSTSRIWWDQS
Trigger: CGACTGGTCCCACCAGATCCGGGATGTGCTGAGCAAAGACTCAGCCCAGGCGCTGCTGGATGGGCTGCACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp AGGAAGCCGCGATCTGAGCCCACCTCCAGGGTCGGGTaGAAGGTCAGCCCATCCTCGTCCAGCTCCATGCGG +
Preference number: 6 (lower is better)
Translates to: RKPRSEPTSRVG*KVSPSSSSSMR
Trigger: CCGCATGGAGCTGGACGAGGATGGGCTGACCTTCAACCCGACCCTGGAGGTGGGCTCAGATCGCGGCTTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp CAGTGGGCAGACGTCATGATCCTTCATGGAGAGCCATaGCCGGGGCACGATCCCGGGCTGCTGGAGGGAGGG +
Preference number: 6 (lower is better)
Translates to: QWADVMILHGEP*PGHDPGLLEGG
Trigger: CCCTCCCTCCAGCAGCCCGGGATCGTGCCCCGGCAATGGCTCTCCATGAAGGATCATGACGTCTGCCCACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587177.1
CDS CAA 90 bp TGGGGCAGGGGGTGCAGCCCATCCAGCAGCGCCTGGGCTGAGTCTTaGCTCAGCACATCCCGGATCTGGTGGGACCAGTCGATGATGGTG +
Preference number: 6 (lower is better)
Translates to: WGRGCSPSSSAWAES*LSTSRIWWDQSMMV
Trigger: CACCATCATCGACTGGTCCCACCAGATCCGGGATGTGCTGAGCAAAGACTCAGCCCAGGCGCTGCTGGATGGGCTGCACCCCCTGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 72 bp CTTCGTCCCAGCGATGCCGGAGCTGGGCCTGCCAGGTaGAGGCCTGAGAACTCTCCACCTTGGCCACGATCA +
Preference number: 6 (lower is better)
Translates to: LRPSDAGAGPAR*RPENSPPWPRS
Trigger: TGATCGTGGCCAAGGTGGAGAGTTCTCAGGCCTTCACCTGGCAGGCCCAGCTCCGGCATCGCTGGGACGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 72 bp GGACCTGAGATTTGCCGCTGCCCGCATTCCCGACGATaGACACGGAGTGGCGGACCTGCAGCAGCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: GPEICRCPHSRR*TRSGGPAAAPP
Trigger: TGGAGGAGCTGCTGCAGGTCCGCCACTCCGTGTTCATCGTCGGGAATGCGGGCAGCGGCAAATCTCAGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 72 bp GGTGCAGCCCATCCAGCAGCGCCTGGGCTGAGTCTTTaGTCAGCACATCCCGGATCTGGTGGGACCAGTCGA +
Preference number: 6 (lower is better)
Translates to: GAAHPAAPGLSL*SAHPGSGGTSR
Trigger: TCGACTGGTCCCACCAGATCCGGGATGTGCTGAGCAAAGACTCAGCCCAGGCGCTGCTGGATGGGCTGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 72 bp ATGAGGTTGCTAGCGGCGTCCCGCAGAATCAGCGGCTaGCCCAGGTTAAAGTGGCAGTCCTGGTCCACGCCC +
Preference number: 6 (lower is better)
Translates to: MRLLAASRRISG*PRLKWQSWSTP
Trigger: GGGCGTGGACCAGGACTGCCACTTTAACCTGGGGCAGCCGCTGATTCTGCGGGACGCCGCTAGCAACCTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS GCA 72 bp GGCCTTCACCTTCTCCTCGCGGGACACTCCCGTGCCTaGCCCCGAGTCCGTCTCTTTTGGCTGCATTTCCAG +
Preference number: 6 (lower is better)
Translates to: GLHLLLAGHSRA*PRVRLFWLHFQ
Trigger: CTGGAAATGCAGCCAAAAGAGACGGACTCGGGGGCAGGCACGGGAGTGTCCCGCGAGGAGAAGGTGAAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000590227.5
ENST00000591369.5
CDS GCA 72 bp GCACGGCCTTCACCTTCTCCTCGCGGGACACTCCCGTaGCTGCCCCCGAGTCCGTCTCTTTTGGCTGCATTT +
Preference number: 6 (lower is better)
Translates to: ARPSPSPRGTLP*LPPSPSLLAAF
Trigger: AAATGCAGCCAAAAGAGACGGACTCGGGGGCAGGCACGGGAGTGTCCCGCGAGGAGAAGGTGAAGGCCGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000590227.5
ENST00000591369.5
CDS CCA 72 bp GAGATGAGCAGGACGTCCCCACACAGCGTGACCCCCTaGCTCCTGAAGTTCTCCACAGACTCAGCCCAGCGG +
Preference number: 6 (lower is better)
Translates to: EMSRTSPHSVTP*LLKFSTDSAQR
Trigger: CCGCTGGGCTGAGTCTGTGGAGAACTTCAGGAGCCAGGGGGTCACGCTGTGTGGGGACGTCCTGCTCATCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000591369.5
ENST00000592152.1
CDS CAA 72 bp CCAGGTGCGGTCAGAATCATGACGGCGGCGGTGACGTaGACCACAGCATCCGGCGGGGACCCAAAGGACTTC +
Preference number: 6 (lower is better)
Translates to: PGAVRIMTAAVT*TTASGGDPKDF
Trigger: GAAGTCCTTTGGGTCCCCGCCGGATGCTGTGGTCAACGTCACCGCCGCCGTCATGATTCTGACCGCACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 90 bp TCCAGGTCAGCCAGGCTGTTGGTGACGTGGTTGCTCAGGTGCCGCTaGAACATGAAGCCCCAGCGCCGGATTGTGCTGAGCAGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: SRSARLLVTWLLRCR*NMKPQRRIVLSRAC
Trigger: GCAGGCCCTGCTCAGCACAATCCGGCGCTGGGGCTTCATGTTCAAGCGGCACCTGAGCAACCACGTCACCAACAGCCTGGCTGACCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 90 bp GGGCTGTGGTGCGTGGCTGTTATTTGGCCTGTGGAAACGACGGTTTaGCGGGGCTCAGCCTCCGAGAAGAAGCCGCTCCAGGTACTCGCC +
Preference number: 6 (lower is better)
Translates to: GLWCVAVIWPVETTV*RGSASEKKPLQVLA
Trigger: GGCGAGTACCTGGAGCGGCTTCTTCTCGGAGGCTGAGCCCCGCAAAACCGTCGTTTCCACAGGCCAAATAACAGCCACGCACCACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587177.1
CDS TCA 72 bp TGGAAACGGTGGCTGGGGTGGCCGTCCTCAGGTGGCTaGTTTCGAACACCAGCCTCATGGTGCGGTTCAGGG +
Preference number: 6 (lower is better)
Translates to: WKRWLGWPSSGG*FRTPASWCGSG
Trigger: CCCTGAACCGCACCATGAGGCTGGTGTTCGAAATCAGCCACCTGAGGACGGCCACCCCAGCCACCGTTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS TCA 72 bp CCTGGAACATGGCGCCACCGAAGGCCCAGAAGCAGGTaGACACGAAGTACAGCTCGTACAGCTCCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: PGTWRHRRPRSR*TRSTARTAPWG
Trigger: CCCCCAGGGAGCTGTACGAGCTGTACTTCGTGTTCACCTGCTTCTGGGCCTTCGGTGGCGCCATGTTCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS TCA 72 bp CCCGCCCCAGCCTTGATGCTGGAGGAAGTCCACTGGTaGGACCACTCCGGCCTTAAAAGGGAACCGCAGGAG +
Preference number: 6 (lower is better)
Translates to: PAPALMLEEVHW*DHSGLKREPQE
Trigger: CTCCTGCGGTTCCCTTTTAAGGCCGGAGTGGTCTCACCAGTGGACTTCCTCCAGCATCAAGGCTGGGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000590227.5
ENST00000591369.5
CDS GCA 72 bp GATCCGGGACAGCTTCTCTTGTGCCTCTGCCAGCTCTaGATTAGCCTCCTCCAGTGCCTGCCTCTTGGGCGC +
Preference number: 6 (lower is better)
Translates to: DPGQLLLCLCQL*ISLLQCLPLGR
Trigger: GCGCCCAAGAGGCAGGCACTGGAGGAGGCTAATGCAGAGCTGGCAGAGGCACAAGAGAAGCTGTCCCGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CCA 72 bp ACTGAGCAGCGAGGTCAATCTGAAGGTTTCGGATCCTaGACCCCAGCCGAGTCCCCGAGGTCACGCACGCTG +
Preference number: 6 (lower is better)
Translates to: TEQRGQSEGFGS*TPAESPRSRTL
Trigger: CAGCGTGCGTGACCTCGGGGACTCGGCTGGGGTCCAGGATCCGAAACCTTCAGATTGACCTCGCTGCTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591369.5
CDS CAA 72 bp GGGAAGCCCAGGCAGGGTATGATCATGCCGGCTGCATaGAGCGTCAGCACCAGCACCTGGACGTCGGGCTTT +
Preference number: 6 (lower is better)
Translates to: GKPRQGMIMPAA*SVSTSTWTSGF
Trigger: AAAGCCCGACGTCCAGGTGCTGGTGCTGACGCTCAATGCAGCCGGCATGATCATACCCTGCCTGGGCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp GCCACCAACGCTTTGCTGAAGTTGACGTGGATGAGGTaGCTAGCGGCGTCCCGCAGAATCAGCGGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: ATNALLKLTWMR*LAASRRISGCP
Trigger: GGGGCAGCCGCTGATTCTGCGGGACGCCGCTAGCAACCTCATCCACGTCAACTTCAGCAAAGCGTTGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS CAA 72 bp GGGCGGCAGTCGCACTGCAGCCAGCCGTGGAACACCTaGGTGTTCTCGCACTTGGACACCTCCTCATACAGC +
Preference number: 6 (lower is better)
Translates to: GRQSHCSQPWNT*VFSHLDTSSYS
Trigger: GCTGTATGAGGAGGTGTCCAAGTGCGAGAACACCAAGGTGTTCCACGGCTGGCTGCAGTGCGACTGCCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp GCCAGGCTGTTGGTGACGTGGTTGCTCAGGTGCCGCTaGAACATGAAGCCCCAGCGCCGGATTGTGCTGAGC +
Preference number: 6 (lower is better)
Translates to: ARLLVTWLLRCR*NMKPQRRIVLS
Trigger: GCTCAGCACAATCCGGCGCTGGGGCTTCATGTTCAAGCGGCACCTGAGCAACCACGTCACCAACAGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp GCTCCCTCCTCTTCCTCCCAAGGCAGTTGTGTGGGCTaGTCCCTTTCAGGGGGTCTGAGAGCAGGAGGGTGG +
Preference number: 6 (lower is better)
Translates to: APSSSSQGSCVG*SLSGGLRAGGW
Trigger: CCACCCTCCTGCTCTCAGACCCCCTGAAAGGGACAAGCCCACACAACTGCCTTGGGAGGAAGAGGAGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586052.5
CDS TCA 72 bp CAGGGTTCTGCAGCTCGCTCACGGCACGCAGGGACGTaGTCACGTTTTTCACGGTGTTGTCGAGCCCCACGA +
Preference number: 6 (lower is better)
Translates to: QGSAARSRHAGT*SRFSRCCRAPR
Trigger: TCGTGGGGCTCGACAACACCGTGAAAAACGTGATCACGTCCCTGCGTGCCGTGAGCGAGCTGCAGAACCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 72 bp ACAGCCCAGGGATCTCTCCTGAGGCCAGCAGGTCATTaGTCAGCACCAGAAACTGCTCCTCGGCCACCTGGG +
Preference number: 6 (lower is better)
Translates to: TAQGSLLRPAGH*SAPETAPRPPG
Trigger: CCCAGGTGGCCGAGGAGCAGTTTCTGGTGCTGATCAATGACCTGCTGGCCTCAGGAGAGATCCCTGGGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS TCA 72 bp CCAGCACGGGGTCCACGGTTTCGCCGATGTTCTCAATaGGCAAGGTGTCCCCTTCCGAGATGGCCTGCTCGA +
Preference number: 6 (lower is better)
Translates to: PARGPRFRRCSQ*ARCPLPRWPAR
Trigger: TCGAGCAGGCCATCTCGGAAGGGGACACCTTGCTCATTGAGAACATCGGCGAAACCGTGGACCCCGTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
ENST00000592152.1
CDS TCA 72 bp GGGTGGTCCTCTGGATGGCTTTCTCAAACACCACGTTaGAGGCCTGGGGATCCGCCACCGAGAGCCATGGAG +
Preference number: 6 (lower is better)
Translates to: GWSSGWLSQTPR*RPGDPPPRAME
Trigger: CTCCATGGCTCTCGGTGGCGGATCCCCAGGCCTTCAACGTGGTGTTTGAGAAAGCCATCCAGAGGACCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590227.5
CDS TCA 72 bp GTGAGCGCTGAGCGTGGAAGAGGCTCCCACAAAGGCTaGGAGCCCTCTGGAGCATGGAGGCTAAGGACACCA +
Preference number: 6 (lower is better)
Translates to: VSAERGRGSHKG*EPSGAWRLRTP
Trigger: TGGTGTCCTTAGCCTCCATGCTCCAGAGGGCTCTCAGCCTTTGTGGGAGCCTCTTCCACGCTCAGCGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592152.1
CDS TCA 72 bp CTGCTGACCAGCCTGCGGGCCATACCCCAGTGTTTCTaGTACCCAAGCCCAAGGCTGGGGCAGAGTGTACCT +
Preference number: 6 (lower is better)
Translates to: LLTSLRAIPQCF*YPSPRLGQSVP
Trigger: AGGTACACTCTGCCCCAGCCTTGGGCTTGGGTATCAGAAACACTGGGGTATGGCCCGCAGGCTGGTCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592192.2
CDS GCA 72 bp AGGTCAGCCAGGCTGTTGGTGACGTGGTTGCTCAGGTaGCGCTTGAACATGAAGCCCCAGCGCCGGATTGTG +
Preference number: 6 (lower is better)
Translates to: RSARLLVTWLLR*RLNMKPQRRIV
Trigger: CACAATCCGGCGCTGGGGCTTCATGTTCAAGCGGCACCTGAGCAACCACGTCACCAACAGCCTGGCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 72 bp AGAGGATCATCAGGTTGGCCTTCTCCGACTGCACCTTaGGCCTCTCGATCCAGCTGCTCACCACCGGGTTCC +
Preference number: 6 (lower is better)
Translates to: RGSSGWPSPTAP*ASRSSCSPPGS
Trigger: GGAACCCGGTGGTGAGCAGCTGGATCGAGAGGCGCAAGGTGCAGTCGGAGAAGGCCAACCTGATGATCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS GCA 72 bp TTATGTCTGTCATACCAGTGCCGGTGGTCCATGTGCTaGCGGATGAGGGTGTGCGGGGCCACCGTCCCATAC +
Preference number: 6 (lower is better)
Translates to: LCLSYQCRWSMC*RMRVCGATVPY
Trigger: GTATGGGACGGTGGCCCCGCACACCCTCATCCGGCAGCACATGGACCACCGGCACTGGTATGACAGACATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 72 bp GTCCAGAGCCTCCTGGGCTGCCAGCAGGGCCGGTTCTaGTTTGGCCAGGTCTGTTTCACAGGCCTTTTGCTT +
Preference number: 6 (lower is better)
Translates to: VQSLLGCQQGRF*FGQVCFTGLLL
Trigger: AAGCAAAAGGCCTGTGAAACAGACCTGGCCAAAGCAGAACCGGCCCTGCTGGCAGCCCAGGAGGCTCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS GCA 72 bp GCCTCCACCACCTTCTCCTCGATCTCGCTGGCTGTGTaGTTGGTGGTCTCCAGATTCTCCACCAAGGCCGTG +
Preference number: 6 (lower is better)
Translates to: ASTTFSSISLAV*LVVSRFSTKAV
Trigger: CACGGCCTTGGTGGAGAATCTGGAGACCACCAAGCACACAGCCAGCGAGATCGAGGAGAAGGTGGTGGAGGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS GCA 72 bp GCGTGGCTGTTATTTGGCCTGTGGAAACGACGGTTTTaGGGGGCTCAGCCTCCGAGAAGAAGCCGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: AWLLFGLWKRRF*GAQPPRRSRSR
Trigger: CCTGGAGCGGCTTCTTCTCGGAGGCTGAGCCCCGCAAAACCGTCGTTTCCACAGGCCAAATAACAGCCACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587177.1
CDS CCA 72 bp GGCGGCAGTCGCACTGCAGCCAGCCGTGGAACACCTTaGTGTTCTCGCACTTGGACACCTCCTCATACAGCT +
Preference number: 6 (lower is better)
Translates to: GGSRTAASRGTP*CSRTWTPPHTA
Trigger: AGCTGTATGAGGAGGTGTCCAAGTGCGAGAACACCAAGGTGTTCCACGGCTGGCTGCAGTGCGACTGCCGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 72 bp TTGATGTCGTCAAAGCGCTGGGAGTCCCCCGGGAGCTaGGTGCGGATGTCTTCGGAGCCGATGAAGATGCTC +
Preference number: 6 (lower is better)
Translates to: LMSSKRWESPGS*VRMSSEPMKML
Trigger: GAGCATCTTCATCGGCTCCGAAGACATCCGCACCCAGCTCCCGGGGGACTCCCAGCGCTTTGACGACATCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000587177.1
CDS CCA 72 bp CTCTGGATGGCTTTCTCAAACACCACGTTGAAGGCCTaGGGATCCGCCACCGAGAGCCATGGAGGCGTGCAG +
Preference number: 6 (lower is better)
Translates to: LWMAFSNTTLKA*GSATESHGGVQ
Trigger: CTGCACGCCTCCATGGCTCTCGGTGGCGGATCCCCAGGCCTTCAACGTGGTGTTTGAGAAAGCCATCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590227.5
CDS CAA 72 bp AAGGCTTCCAGGTCAGCCAGGCTGTTGGTGACGTGGTaGCTCAGGTGCCGCTTGAACATGAAGCCCCAGCGC +
Preference number: 6 (lower is better)
Translates to: KASRSARLLVTW*LRCRLNMKPQR
Trigger: GCGCTGGGGCTTCATGTTCAAGCGGCACCTGAGCAACCACGTCACCAACAGCCTGGCTGACCTGGAAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp GACAGGTGGCGGCTCACCTCCACGGGGTCATTGCCATaGGAGAGAATGTCCAGGAGGTCAGCCGAGGAGACA +
Preference number: 6 (lower is better)
Translates to: DRWRLTSTGSLP*ERMSRRSAEET
Trigger: TGTCTCCTCGGCTGACCTCCTGGACATTCTCTCCAATGGCAATGACCCCGTGGAGGTGAGCCGCCACCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000587177.1
CDS CAA 72 bp ACCAGCCTCATGGTGCGGTTCAGGGGGATCCGCTCGTaGCTGGCCAGGGTGAGGACCTTGTTGTCATCCATG +
Preference number: 6 (lower is better)
Translates to: TSLMVRFRGIRS*LARVRTLLSSM
Trigger: CATGGATGACAACAAGGTCCTCACCCTGGCCAGCAACGAGCGGATCCCCCTGAACCGCACCATGAGGCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CAA 72 bp GGGGTGGTCCTCTGGATGGCTTTCTCAAACACCACGTaGAAGGCCTGGGGATCCGCCACCGAGAGCCATGGA +
Preference number: 6 (lower is better)
Translates to: GVVLWMAFSNTT*KAWGSATESHG
Trigger: TCCATGGCTCTCGGTGGCGGATCCCCAGGCCTTCAACGTGGTGTTTGAGAAAGCCATCCAGAGGACCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590227.5
CDS CAA 90 bp AGGGACTGGGGGAAGCCCAGGCAGGGTATGATCATGCCGGCTGCATaGAGCGTCAGCACCAGCACCTGGACGTCGGGCTTTTCAAAGAAC +
Preference number: 6 (lower is better)
Translates to: RDWGKPRQGMIMPAA*SVSTSTWTSGFSKN
Trigger: GTTCTTTGAAAAGCCCGACGTCCAGGTGCTGGTGCTGACGCTCAATGCAGCCGGCATGATCATACCCTGCCTGGGCTTCCCCCAGTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 72 bp CCTCGAACAGGCCCCCGGACTTGGACAGCGCCTCCATaGTGCCTTCCATGGCGGAGATGCTCTTTTGTTGCT +
Preference number: 6 (lower is better)
Translates to: PRTGPRTWTAPP*CLPWRRCSFVA
Trigger: AGCAACAAAAGAGCATCTCCGCCATGGAAGGCATCATGGAGGCGCTGTCCAAGTCCGGGGGCCTGTTCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 72 bp TTTCCGCCGCAGGATGCTGACCTCGTTGGCCTGGAGTaGTGCCACGGTCAGCTTCACCTGAATGGCCAGTTT +
Preference number: 6 (lower is better)
Translates to: FPPQDADLVGLE*CHGQLHLNGQF
Trigger: AAACTGGCCATTCAGGTGAAGCTGACCGTGGCACCACTCCAGGCCAACGAGGTCAGCATCCTGCGGCGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 72 bp AAGGCCTTGAATTCCTGGTTGATGTCGTCAAAGCGCTaGGAGTCCCCCGGGAGCTGGGTGCGGATGTCTTCG +
Preference number: 6 (lower is better)
Translates to: KALNSWLMSSKR*ESPGSWVRMSS
Trigger: CGAAGACATCCGCACCCAGCTCCCGGGGGACTCCCAGCGCTTTGACGACATCAACCAGGAATTCAAGGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000587177.1
CDS CCA 72 bp ACAGGTGGCGGCTCACCTCCACGGGGTCATTGCCATTaGAGAGAATGTCCAGGAGGTCAGCCGAGGAGACAA +
Preference number: 6 (lower is better)
Translates to: TGGGSPPRGHCH*RECPGGQPRRQ
Trigger: TTGTCTCCTCGGCTGACCTCCTGGACATTCTCTCCAATGGCAATGACCCCGTGGAGGTGAGCCGCCACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000587177.1
CDS CCA 72 bp CCACCACCTTCTCCTCGATCTCGCTGGCTGTGTGCTTaGTGGTCTCCAGATTCTCCACCAAGGCCGTGTCTC +
Preference number: 6 (lower is better)
Translates to: PPPSPRSRWLCA*WSPDSPPRPCL
Trigger: GAGACACGGCCTTGGTGGAGAATCTGGAGACCACCAAGCACACAGCCAGCGAGATCGAGGAGAAGGTGGTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CCA 72 bp ACCCGCTGCTTCACCTCGTTGGCAGGGGTGGTCCTCTaGATGGCTTTCTCAAACACCACGTTGAAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: TRCFTSLAGVVL*MAFSNTTLKAW
Trigger: CCAGGCCTTCAACGTGGTGTTTGAGAAAGCCATCCAGAGGACCACCCCTGCCAACGAGGTGAAGCAGCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590227.5
CDS CAA 72 bp AAGAGGATCATCAGGTTGGCCTTCTCCGACTGCACCTaGCGCCTCTCGATCCAGCTGCTCACCACCGGGTTC +
Preference number: 6 (lower is better)
Translates to: KRIIRLAFSDCT*RLSIQLLTTGF
Trigger: GAACCCGGTGGTGAGCAGCTGGATCGAGAGGCGCAAGGTGCAGTCGGAGAAGGCCAACCTGATGATCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CAA 72 bp AACAGCCCAGGGATCTCTCCTGAGGCCAGCAGGTCATaGATCAGCACCAGAAACTGCTCCTCGGCCACCTGG +
Preference number: 6 (lower is better)
Translates to: NSPGISPEASRS*ISTRNCSSATW
Trigger: CCAGGTGGCCGAGGAGCAGTTTCTGGTGCTGATCAATGACCTGCTGGCCTCAGGAGAGATCCCTGGGCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 72 bp TGCGTGGCTGTTATTTGGCCTGTGGAAACGACGGTTTaGCGGGGCTCAGCCTCCGAGAAGAAGCCGCTCCAG +
Preference number: 6 (lower is better)
Translates to: CVAVIWPVETTV*RGSASEKKPLQ
Trigger: CTGGAGCGGCTTCTTCTCGGAGGCTGAGCCCCGCAAAACCGTCGTTTCCACAGGCCAAATAACAGCCACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587177.1
CDS CAA 90 bp TGTTTCATGGACACCTCTAGCCTCTCCTGCAGCTCCAGGCTCCATTaGAGCTGCCCGGCCACGGGAGGCATGTTTTTGTGGATCAGGGGG +
Preference number: 6 (lower is better)
Translates to: CFMDTSSLSCSSRLH*SCPATGGMFLWIRG
Trigger: CCCCCTGATCCACAAAAACATGCCTCCCGTGGCCGGGCAGCTCAAATGGAGCCTGGAGCTGCAGGAGAGGCTAGAGGTGTCCATGAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS CAA 90 bp AGAGTGTCCAGAGCCTCCTGGGCTGCCAGCAGGGCCGGTTCTGCTTaGGCCAGGTCTGTTTCACAGGCCTTTTGCTTCTCAGTGACGTTC +
Preference number: 6 (lower is better)
Translates to: RVSRASWAASRAGSA*ARSVSQAFCFSVTF
Trigger: GAACGTCACTGAGAAGCAAAAGGCCTGTGAAACAGACCTGGCCAAAGCAGAACCGGCCCTGCTGGCAGCCCAGGAGGCTCTGGACACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 90 bp GTGAACAGGGCCACGTTCTCCTCGGCGCCTATCAGCTTGCTCCACTaGTCCGGCTTGAACTTCAGGACGATGGAGGCAACTTCCTCCAGA +
Preference number: 6 (lower is better)
Translates to: VNRATFSSAPISLLH*SGLNFRTMEATSSR
Trigger: TCTGGAGGAAGTTGCCTCCATCGTCCTGAAGTTCAAGCCGGACAAGTGGAGCAAGCTGATAGGCGCCGAGGAGAACGTGGCCCTGTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 90 bp CTCAGAACTGCCACCAACGCTTTGCTGAAGTTGACGTGGATGAGGTaGCTAGCGGCGTCCCGCAGAATCAGCGGCTGCCCCAGGTTAAAG +
Preference number: 6 (lower is better)
Translates to: LRTATNALLKLTWMR*LAASRRISGCPRLK
Trigger: CTTTAACCTGGGGCAGCCGCTGATTCTGCGGGACGCCGCTAGCAACCTCATCCACGTCAACTTCAGCAAAGCGTTGGTGGCAGTTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS CAA 90 bp TCCTCCATAAACAGCCCAGGGATCTCTCCTGAGGCCAGCAGGTCATaGATCAGCACCAGAAACTGCTCCTCGGCCACCTGGGAGTCTGTC +
Preference number: 6 (lower is better)
Translates to: SSINSPGISPEASRS*ISTRNCSSATWESV
Trigger: GACAGACTCCCAGGTGGCCGAGGAGCAGTTTCTGGTGCTGATCAATGACCTGCTGGCCTCAGGAGAGATCCCTGGGCTGTTTATGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS TCA 72 bp CCAGCACCTGGACGTCGGGCTTTTCAAAGAACTCTGTaGACAGGGCCACGTTCTCCTCGGCGCCTATCAGCT +
Preference number: 6 (lower is better)
Translates to: PAPGRRAFQRTL*TGPRSPRRLSA
Trigger: AGCTGATAGGCGCCGAGGAGAACGTGGCCCTGTTCACAGAGTTCTTTGAAAAGCCCGACGTCCAGGTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 72 bp CAGTGGCGTGATCTTGGCTCACTGCACCCTCTGCAGTaGGGGAGGTTGCAGTGTTCAAGCGATTCTCCTGCC +
Preference number: 6 (lower is better)
Translates to: QWRDLGSLHPLQ*GRLQCSSDSPA
Trigger: GGCAGGAGAATCGCTTGAACACTGCAACCTCCCTCACTGCAGAGGGTGCAGTGAGCCAAGATCACGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590227.5
CDS GCA 72 bp AGGGAGATGCCACTCAGGACTTCCTCGATTTCACCTTaGAGGCCCTTCAGCACCTCTTCCGGGCTCAGGAAG +
Preference number: 6 (lower is better)
Translates to: REMPLRTSSISP*RPFSTSSGLRK
Trigger: CTTCCTGAGCCCGGAAGAGGTGCTGAAGGGCCTGCAAGGTGAAATCGAGGAAGTCCTGAGTGGCATCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS GCA 72 bp AGCTGCACCACCTTCAGCACGAAGCTGTCCTCCGCCTaGAGCTTGAGCTCCACGATGCTCTGCTTGATGATC +
Preference number: 6 (lower is better)
Translates to: SCTTFSTKLSSA*SLSSTMLCLMI
Trigger: GATCATCAAGCAGAGCATCGTGGAGCTCAAGCTGCAGGCGGAGGACAGCTTCGTGCTGAAGGTGGTGCAGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 72 bp CCTGAGGCCAGCAGGTCATTGATCAGCACCAGAAACTaGTCCTCGGCCACCTGGGAGTCTGTCATCAGGAAC +
Preference number: 6 (lower is better)
Translates to: PEASRSLISTRN*SSATWESVIRN
Trigger: GTTCCTGATGACAGACTCCCAGGTGGCCGAGGAGCAGTTTCTGGTGCTGATCAATGACCTGCTGGCCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS GCA 72 bp GTTGTTCTTATTCAGAGTGTCCAGAGCCTCCTGGGCTaGCAGCAGGGCCGGTTCTGCTTTGGCCAGGTCTGT +
Preference number: 6 (lower is better)
Translates to: VVLIQSVQSLLG*QQGRFCFGQVC
Trigger: ACAGACCTGGCCAAAGCAGAACCGGCCCTGCTGGCAGCCCAGGAGGCTCTGGACACTCTGAATAAGAACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CCA 72 bp GCCTGGGCTGAGTCTTTGCTCAGCACATCCCGGATCTaGTGGGACCAGTCGATGATGGTGGTTTCAATGGCG +
Preference number: 6 (lower is better)
Translates to: AWAESLLSTSRI*WDQSMMVVSMA
Trigger: CGCCATTGAAACCACCATCATCGACTGGTCCCACCAGATCCGGGATGTGCTGAGCAAAGACTCAGCCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 72 bp GTGCCACGGTCAGCTTCACCTGAATGGCCAGTTTCTTaGTATTTGCCCAGTGCTCCGGCAGCTCCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: VPRSASPEWPVS*YLPSAPAAPAA
Trigger: AGCTGCAGGAGCTGCCGGAGCACTGGGCAAATACCAAGAAACTGGCCATTCAGGTGAAGCTGACCGTGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 72 bp TGGCCTGGAGTGGTGCCACGGTCAGCTTCACCTGAATaGCCAGTTTCTTGGTATTTGCCCAGTGCTCCGGCA +
Preference number: 6 (lower is better)
Translates to: WPGVVPRSASPE*PVSWYLPSAPA
Trigger: TGCCGGAGCACTGGGCAAATACCAAGAAACTGGCCATTCAGGTGAAGCTGACCGTGGCACCACTCCAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 72 bp ACCCGCTGCTTCACCTCGTTGGCAGGGGTGGTCCTCTaGATGGCTTTCTCAAACACCACGTTGAAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: TRCFTSLAGVVL*MAFSNTTLKAL
Trigger: CAAGGCCTTCAACGTGGTGTTTGAGAAAGCCATCCAGAGGACCACCCCTGCCAACGAGGTGAAGCAGCGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 72 bp GCCACGTTCTCCTCGGCGCCTATCAGCTTGCTCCACTaGTCCGGCTTGAACTTCAGGACGATGGAGGCAACT +
Preference number: 6 (lower is better)
Translates to: ATFSSAPISLLH*SGLNFRTMEAT
Trigger: AGTTGCCTCCATCGTCCTGAAGTTCAAGCCGGACAAGTGGAGCAAGCTGATAGGCGCCGAGGAGAACGTGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp GTGAACAGGGCCACGTTCTCCTCGGCGCCTATCAGCTaGCTCCACTTGTCCGGCTTGAACTTCAGGACGATG +
Preference number: 6 (lower is better)
Translates to: VNRATFSSAPIS*LHLSGLNFRTM
Trigger: CATCGTCCTGAAGTTCAAGCCGGACAAGTGGAGCAAGCTGATAGGCGCCGAGGAGAACGTGGCCCTGTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp GAGGTGGCCCAGATGAAGCAGATGGTGTCCAGCACCTaGGCAATGAAGGTGGGGAGCATCGTGAAGTCGGCT +
Preference number: 6 (lower is better)
Translates to: EVAQMKQMVSST*AMKVGSIVKSA
Trigger: AGCCGACTTCACGATGCTCCCCACCTTCATTGCCAAGGTGCTGGACACCATCTGCTTCATCTGGGCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS CAA 72 bp CAGGGAGATGCCACTCAGGACTTCCTCGATTTCACCTaGCAGGCCCTTCAGCACCTCTTCCGGGCTCAGGAA +
Preference number: 6 (lower is better)
Translates to: QGDATQDFLDFT*QALQHLFRAQE
Trigger: TTCCTGAGCCCGGAAGAGGTGCTGAAGGGCCTGCAAGGTGAAATCGAGGAAGTCCTGAGTGGCATCTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS CAA 72 bp TGGATCACCGTGATCTCCGGCACTGGCGTGATCTTCTaGAACCCAAAGCGCAACTTGTCCAGGCACGTGGGC +
Preference number: 6 (lower is better)
Translates to: WITVISGTGVIF*NPKRNLSRHVG
Trigger: GCCCACGTGCCTGGACAAGTTGCGCTTTGGGTTCAAGAAGATCACGCCAGTGCCGGAGATCACGGTGATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CAA 72 bp TCCACCACCTTCTCCTCGATCTCGCTGGCTGTGTGCTaGGTGGTCTCCAGATTCTCCACCAAGGCCGTGTCT +
Preference number: 6 (lower is better)
Translates to: STTFSSISLAVC*VVSRFSTKAVS
Trigger: AGACACGGCCTTGGTGGAGAATCTGGAGACCACCAAGCACACAGCCAGCGAGATCGAGGAGAAGGTGGTGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 90 bp TTCTGCTGCCAGCTTGTCACCTCCTTCAGGAAGTGGGCCAGGTACTaGGACATCATCAGGTTCTGCAGCTGCACCTGGTTGTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: FCCQLVTSFRKWARY*DIIRFCSCTWLSSS
Trigger: GCTGGAGGACAACCAGGTGCAGCTGCAGAACCTGATGATGTCCAAGTACCTGGCCCACTTCCTGAAGGAGGTGACAAGCTGGCAGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000587177.1
CDS CAA 90 bp CACGGTCTTCTCCGTGAGCAGGCACTCCAGCAGGTACAGAATCGTTaGGATCACCGTGATCTCCGGCACTGGCGTGATCTTCTTGAACCC +
Preference number: 6 (lower is better)
Translates to: HGLLREQALQQVQNR*DHRDLRHWRDLLEP
Trigger: GGGTTCAAGAAGATCACGCCAGTGCCGGAGATCACGGTGATCCAAACGATTCTGTACCTGCTGGAGTGCCTGCTCACGGAGAAGACCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS TCA 72 bp CCTCGGCGCCTATCAGCTTGCTCCACTTGTCCGGCTTaGACTTCAGGACGATGGAGGCAACTTCCTCCAGAT +
Preference number: 6 (lower is better)
Translates to: PRRLSACSTCPA*TSGRWRQLPPD
Trigger: ATCTGGAGGAAGTTGCCTCCATCGTCCTGAAGTTCAAGCCGGACAAGTGGAGCAAGCTGATAGGCGCCGAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 72 bp CCATCACCTCCACAAGCCCATCATAGTCCCCCTCCTTaGGGGGCTTGGTCAAGCCCATTCTGGCGACTTTCA +
Preference number: 6 (lower is better)
Translates to: PSPPQAHHSPPP*GAWSSPFWRLS
Trigger: TGAAAGTCGCCAGAATGGGCTTGACCAAGCCCCTCAAGGAGGGGGACTATGATGGGCTTGTGGAGGTGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 72 bp TCGTTGGCCTGGAGTGGTGCCACGGTCAGCTTCACCTaGATGGCCAGTTTCTTGGTATTTGCCCAGTGCTCC +
Preference number: 6 (lower is better)
Translates to: SLAWSGATVSFT*MASFLVFAQCS
Trigger: GGAGCACTGGGCAAATACCAAGAAACTGGCCATTCAGGTGAAGCTGACCGTGGCACCACTCCAGGCCAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 72 bp ACCGAGGGAACGTTCTTCACGGCAGCCTTTATGTACTaGGCAGCGAGGTCAATCTTGAGGTCGGGGATCCCG +
Preference number: 6 (lower is better)
Translates to: TEGTFFTAAFMY*AARSILRSGIP
Trigger: CGGGATCCCCGACCTCAAGATTGACCTCGCTGCTCAGTACATAAAGGCTGCCGTGAAGAACGTTCCCTCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS TCA 72 bp AGAAGAGAGCCGTGGACAGATCTTCCACGTCGGTCGTaGTGGTCAGTTCTCCCTTCAGCCCCAGGTTCAGCT +
Preference number: 6 (lower is better)
Translates to: RREPWTDLPRRS*WSVLPSAPGSA
Trigger: AGCTGAACCTGGGGCTGAAGGGAGAACTGACCATCACGACCGACGTGGAAGATCTGTCCACGGCTCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000586850.1
ENST00000590227.5
ENST00000591369.5
CDS GCA 72 bp TTGTCAAAGAGGATCATCAGGTTGGCCTTCTCCGACTaGACCTTGCGCCTCTCGATCCAGCTGCTCACCACC +
Preference number: 6 (lower is better)
Translates to: LSKRIIRLAFSD*TLRLSIQLLTT
Trigger: GGTGGTGAGCAGCTGGATCGAGAGGCGCAAGGTGCAGTCGGAGAAGGCCAACCTGATGATCCTCTTTGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CCA 72 bp CTCAGAACTGCCACCAACGCTTTGCTGAAGTTGACGTaGATGAGGTTGCTAGCGGCGTCCCGCAGAATCAGC +
Preference number: 6 (lower is better)
Translates to: LRTATNALLKLT*MRLLAASRRIS
Trigger: GCTGATTCTGCGGGACGCCGCTAGCAACCTCATCCACGTCAACTTCAGCAAAGCGTTGGTGGCAGTTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS CCA 72 bp GCAGCCAGCCGTGGAACACCTTGGTGTTCTCGCACTTaGACACCTCCTCATACAGCTTCTCGTAGGAGTCGA +
Preference number: 6 (lower is better)
Translates to: AASRGTPWCSRT*TPPHTASRRSR
Trigger: TCGACTCCTACGAGAAGCTGTATGAGGAGGTGTCCAAGTGCGAGAACACCAAGGTGTTCCACGGCTGGCTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 72 bp ACGTGGGCAGGTACTTGTCAAAGAGGATCATCAGGTTaGCCTTCTCCGACTGCACCTTGCGCCTCTCGATCC +
Preference number: 6 (lower is better)
Translates to: TWAGTCQRGSSG*PSPTAPCASRS
Trigger: GGATCGAGAGGCGCAAGGTGCAGTCGGAGAAGGCCAACCTGATGATCCTCTTTGACAAGTACCTGCCCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CCA 72 bp TCCGTGAGCAGGCACTCCAGCAGGTACAGAATCGTTTaGATCACCGTGATCTCCGGCACTGGCGTGATCTTC +
Preference number: 6 (lower is better)
Translates to: SVSRHSSRYRIV*ITVISGTGVIF
Trigger: GAAGATCACGCCAGTGCCGGAGATCACGGTGATCCAAACGATTCTGTACCTGCTGGAGTGCCTGCTCACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CCA 72 bp CTCGCGGAGGAGCGGTCATGTCCTCTCGGTTTTTCTTaGTCACCTCGACAGACAGACACATCTTGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: LAEERSCPLGFS*SPRQTDTSCPG
Trigger: CCCTGGACAAGATGTGTCTGTCTGTCGAGGTGACCAAGAAAAACCGAGAGGACATGACCGCTCCTCCGCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000590227.5
ENST00000591369.5
CDS CAA 72 bp TCCTCGGCGCCTATCAGCTTGCTCCACTTGTCCGGCTaGAACTTCAGGACGATGGAGGCAACTTCCTCCAGA +
Preference number: 6 (lower is better)
Translates to: SSAPISLLHLSG*NFRTMEATSSR
Trigger: TCTGGAGGAAGTTGCCTCCATCGTCCTGAAGTTCAAGCCGGACAAGTGGAGCAAGCTGATAGGCGCCGAGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp CACGTGGGCAGGTACTTGTCAAAGAGGATCATCAGGTaGGCCTTCTCCGACTGCACCTTGCGCCTCTCGATC +
Preference number: 6 (lower is better)
Translates to: HVGRYLSKRIIR*AFSDCTLRLSI
Trigger: GATCGAGAGGCGCAAGGTGCAGTCGGAGAAGGCCAACCTGATGATCCTCTTTGACAAGTACCTGCCCACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CAA 72 bp CTCCGTGAGCAGGCACTCCAGCAGGTACAGAATCGTTaGGATCACCGTGATCTCCGGCACTGGCGTGATCTT +
Preference number: 6 (lower is better)
Translates to: LREQALQQVQNR*DHRDLRHWRDL
Trigger: AAGATCACGCCAGTGCCGGAGATCACGGTGATCCAAACGATTCTGTACCTGCTGGAGTGCCTGCTCACGGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CAA 90 bp GCCACGTTCTCCTCGGCGCCTATCAGCTTGCTCCACTTGTCCGGCTaGAACTTCAGGACGATGGAGGCAACTTCCTCCAGATACTCTAGT +
Preference number: 6 (lower is better)
Translates to: ATFSSAPISLLHLSG*NFRTMEATSSRYSS
Trigger: ACTAGAGTATCTGGAGGAAGTTGCCTCCATCGTCCTGAAGTTCAAGCCGGACAAGTGGAGCAAGCTGATAGGCGCCGAGGAGAACGTGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 90 bp AAGAACTCTGTGAACAGGGCCACGTTCTCCTCGGCGCCTATCAGCTaGCTCCACTTGTCCGGCTTGAACTTCAGGACGATGGAGGCAACT +
Preference number: 6 (lower is better)
Translates to: KNSVNRATFSSAPIS*LHLSGLNFRTMEAT
Trigger: AGTTGCCTCCATCGTCCTGAAGTTCAAGCCGGACAAGTGGAGCAAGCTGATAGGCGCCGAGGAGAACGTGGCCCTGTTCACAGAGTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 90 bp ATTTACAGCCAGGGAGATGCCACTCAGGACTTCCTCGATTTCACCTaGCAGGCCCTTCAGCACCTCTTCCGGGCTCAGGAAGGTTCGTGT +
Preference number: 6 (lower is better)
Translates to: IYSQGDATQDFLDFT*QALQHLFRAQEGSC
Trigger: ACACGAACCTTCCTGAGCCCGGAAGAGGTGCTGAAGGGCCTGCAAGGTGAAATCGAGGAAGTCCTGAGTGGCATCTCCCTGGCTGTAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS CAA 90 bp GCCGTGCTCTGCAGCTTCATCAGGCCGTTCTCCAGCCTCTCGATTTaGGCAACAAGTTCCGTTCTCTTCTTGGCCAGCAGGTTCTGGTAC +
Preference number: 6 (lower is better)
Translates to: AVLCSFIRPFSSLSI*ATSSVLFLASRFWY
Trigger: GTACCAGAACCTGCTGGCCAAGAAGAGAACGGAACTTGTTGCCAAAATCGAGAGGCTGGAGAACGGCCTGATGAAGCTGCAGAGCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 90 bp ATTTTTGCCTCCACCACCTTCTCCTCGATCTCGCTGGCTGTGTGCTaGGTGGTCTCCAGATTCTCCACCAAGGCCGTGTCTCCCAGAAAG +
Preference number: 6 (lower is better)
Translates to: IFASTTFSSISLAVC*VVSRFSTKAVSPRK
Trigger: CTTTCTGGGAGACACGGCCTTGGTGGAGAATCTGGAGACCACCAAGCACACAGCCAGCGAGATCGAGGAGAAGGTGGTGGAGGCAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS TCA 72 bp TGCTCAGCACATCCCGGATCTGGTGGGACCAGTCGATaGTGGTGGTTTCAATGGCGTGCAGGAGCAAGTTGT +
Preference number: 6 (lower is better)
Translates to: CSAHPGSGGTSR*WWFQWRAGASC
Trigger: ACAACTTGCTCCTGCACGCCATTGAAACCACCATCATCGACTGGTCCCACCAGATCCGGGATGTGCTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 72 bp CACCTCGTCCTCCATAAACAGCCCAGGGATCTCTCCTaGGGCCAGCAGGTCATTGATCAGCACCAGAAACTG +
Preference number: 6 (lower is better)
Translates to: HLVLHKQPRDLS*GQQVIDQHQKL
Trigger: CAGTTTCTGGTGCTGATCAATGACCTGCTGGCCTCAGGAGAGATCCCTGGGCTGTTTATGGAGGACGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS TCA 72 bp TGGTCAGTTCTCCCTTCAGCCCCAGGTTCAGCTCCTTaGGCGAACGGCGCATTTCGTTGGTCAGGATGTTCA +
Preference number: 6 (lower is better)
Translates to: WSVLPSAPGSAP*ANGAFRWSGCS
Trigger: TGAACATCCTGACCAACGAAATGCGCCGTTCGCTCAAGGAGCTGAACCTGGGGCTGAAGGGAGAACTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000586850.1
ENST00000590227.5
ENST00000591369.5
CDS TCA 72 bp AGAAGAGAGCCGTGGACAGATCTTCCACGTCGGTCGTaGTGGTCAGTTCTCCCTAGGAGACACACAGATGGG +
Preference number: 6 (lower is better)
Translates to: RREPWTDLPRRS*WSVLPRRHTDG
Trigger: CCCATCTGTGTGTCTCCTAGGGAGAACTGACCATCACGACCGACGTGGAAGATCTGTCCACGGCTCTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591647.1
CDS GCA 72 bp TGGTGGGACCAGTCGATGATGGTGGTTTCAATGGCGTaGAGGAGCAAGTTGTCCAGTGAAGAGGGGATCCTC +
Preference number: 6 (lower is better)
Translates to: WWDQSMMVVSMA*RSKLSSEEGIL
Trigger: GAGGATCCCCTCTTCACTGGACAACTTGCTCCTGCACGCCATTGAAACCACCATCATCGACTGGTCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 72 bp TGCTTCAGGGGCTCAAACATGTTGTCGGTGGCTGCTTaGCTCTCCTTGACTTTCATCAGGTGCCCCATCACC +
Preference number: 6 (lower is better)
Translates to: CFRGSNMLSVAA*LSLTFIRCPIT
Trigger: GGTGATGGGGCACCTGATGAAAGTCAAGGAGAGGCAAGCAGCCACCGACAACATGTTTGAGCCCCTGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 72 bp GGTCAGCTTCACCTGAATGGCCAGTTTCTTGGTATTTaGCCAGTGCTCCGGCAGCTCCTGCAGCTTCAAGTG +
Preference number: 6 (lower is better)
Translates to: GQLHLNGQFLGI*PVLRQLLQLQV
Trigger: CACTTGAAGCTGCAGGAGCTGCCGGAGCACTGGGCAAATACCAAGAAACTGGCCATTCAGGTGAAGCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 72 bp CTTGTTTTTGATCCGGGACAGCTTCTCTTGTGCCTCTaGCAGCTCTGCATTAGCCTCCTCCAGTGCCTGCCT +
Preference number: 6 (lower is better)
Translates to: LVFDPGQLLLCL*QLCISLLQCLP
Trigger: AGGCAGGCACTGGAGGAGGCTAATGCAGAGCTGGCAGAGGCACAAGAGAAGCTGTCCCGGATCAAAAACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CCA 72 bp ATCATGCCGGCTGCATTGAGCGTCAGCACCAGCACCTaGACGTCGGGCTTTTCAAAGAACTCTGTGAACAGG +
Preference number: 6 (lower is better)
Translates to: IMPAALSVSTST*TSGFSKNSVNR
Trigger: CCTGTTCACAGAGTTCTTTGAAAAGCCCGACGTCCAGGTGCTGGTGCTGACGCTCAATGCAGCCGGCATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 72 bp GAGACCACCTGGGGCCATCCAGCCATGTTCTCACTTTaGTTTAACAGAGAAGAGAGGACCTCCTCCACCACC +
Preference number: 6 (lower is better)
Translates to: ETTWGHPAMFSL*FNREERTSSTT
Trigger: GGTGGTGGAGGAGGTCCTCTCTTCTCTGTTAAACCAAAGTGAGAACATGGCTGGATGGCCCCAGGTGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 72 bp ATCAGGGGGATGTTCCCCTCCTCGGAGGCCGCCATCTaGGCATCGTACAAGATCTTAGCATTGTCTAGCTCA +
Preference number: 6 (lower is better)
Translates to: IRGMFPSSEAAI*ASYKILALSSS
Trigger: TGAGCTAGACAATGCTAAGATCTTGTACGATGCCCAGATGGCGGCCTCCGAGGAGGGGAACATCCCCCTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS CCA 72 bp CATGTCGTCGATGAAGTAGACGAGCTTCTTAGTGCCTaGCGGCCCGTAGTTCCTCCCCGATTTCTTCTCCAG +
Preference number: 6 (lower is better)
Translates to: HVVDEVDELLSA*RPVVPPRFLLQ
Trigger: CTGGAGAAGAAATCGGGGAGGAACTACGGGCCGCCAGGCACTAAGAAGCTCGTCTACTTCATCGACGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CCA 72 bp TCATTGATCAGCACCAGAAACTGCTCCTCGGCCACCTaGGAGTCTGTCATCAGGAACACCGAGGGAACGTTC +
Preference number: 6 (lower is better)
Translates to: SLISTRNCSSAT*ESVIRNTEGTF
Trigger: GAACGTTCCCTCGGTGTTCCTGATGACAGACTCCCAGGTGGCCGAGGAGCAGTTTCTGGTGCTGATCAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CCA 72 bp TCTTTGCTGACCTTCTCGGCCTCGATGCCGACCACCTaGATCAGTTGGTCTGCGCTCTCATTCTTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SLLTFSASMPTT*ISWSALSFFCL
Trigger: CAAGCAGAAGAATGAGAGCGCAGACCAACTGATCCAGGTGGTCGGCATCGAGGCCGAGAAGGTCAGCAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 72 bp ACTTCTCTCAGAACTGCCACCAACGCTTTGCTGAAGTaGACGTGGATGAGGTTGCTAGCGGCGTCCCGCAGA +
Preference number: 6 (lower is better)
Translates to: TSLRTATNALLK*TWMRLLAASRR
Trigger: TCTGCGGGACGCCGCTAGCAACCTCATCCACGTCAACTTCAGCAAAGCGTTGGTGGCAGTTCTGAGAGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS CAA 72 bp CCAAAGCGCAACTTGTCCAGGCACGTGGGCAGGTACTaGTCAAAGAGGATCATCAGGTTGGCCTTCTCCGAC +
Preference number: 6 (lower is better)
Translates to: PKRNLSRHVGRY*SKRIIRLAFSD
Trigger: GTCGGAGAAGGCCAACCTGATGATCCTCTTTGACAAGTACCTGCCCACGTGCCTGGACAAGTTGCGCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CAA 72 bp GGCACTGGCGTGATCTTCTTGAACCCAAAGCGCAACTaGTCCAGGCACGTGGGCAGGTACTTGTCAAAGAGG +
Preference number: 6 (lower is better)
Translates to: GTGVIFLNPKRN*SRHVGRYLSKR
Trigger: CCTCTTTGACAAGTACCTGCCCACGTGCCTGGACAAGTTGCGCTTTGGGTTCAAGAAGATCACGCCAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CAA 72 bp ATGGTCAGTTCTCCCTTCAGCCCCAGGTTCAGCTCCTaGAGCGAACGGCGCATTTCGTTGGTCAGGATGTTC +
Preference number: 6 (lower is better)
Translates to: MVSSPFSPRFSS*SERRISLVRMF
Trigger: GAACATCCTGACCAACGAAATGCGCCGTTCGCTCAAGGAGCTGAACCTGGGGCTGAAGGGAGAACTGACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000586850.1
ENST00000590227.5
ENST00000591369.5
CDS CAA 72 bp CGGTTTTTCTTGGTCACCTCGACAGACAGACACATCTaGTCCAGGGGCCACTCGTTCTTCCTGGCCATGGAC +
Preference number: 6 (lower is better)
Translates to: RFFLVTSTDRHI*SRGHSFFLAMD
Trigger: GTCCATGGCCAGGAAGAACGAGTGGCCCCTGGACAAGATGTGTCTGTCTGTCGAGGTGACCAAGAAAAACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000590227.5
ENST00000591369.5
CDS CAA 72 bp TCTCGCGGAGGAGCGGTCATGTCCTCTCGGTTTTTCTaGGTCACCTCGACAGACAGACACATCTTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: SRGGAVMSSRFF*VTSTDRHILSR
Trigger: CCTGGACAAGATGTGTCTGTCTGTCGAGGTGACCAAGAAAAACCGAGAGGACATGACCGCTCCTCCGCGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000590227.5
ENST00000591369.5
CDS CAA 90 bp CCCTCCTCGGAGGCCGCCATCTGGGCATCGTACAAGATCTTAGCATaGTCTAGCTCAGCGTCAAACAGCTCCAGCATGACTGAATACCTG +
Preference number: 6 (lower is better)
Translates to: PSSEAAIWASYKILA*SSSASNSSSMTEYL
Trigger: CAGGTATTCAGTCATGCTGGAGCTGTTTGACGCTGAGCTAGACAATGCTAAGATCTTGTACGATGCCCAGATGGCGGCCTCCGAGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS CAA 90 bp GTGATCTCCGGCACTGGCGTGATCTTCTTGAACCCAAAGCGCAACTaGTCCAGGCACGTGGGCAGGTACTTGTCAAAGAGGATCATCAGG +
Preference number: 6 (lower is better)
Translates to: VISGTGVIFLNPKRN*SRHVGRYLSKRIIR
Trigger: CCTGATGATCCTCTTTGACAAGTACCTGCCCACGTGCCTGGACAAGTTGCGCTTTGGGTTCAAGAAGATCACGCCAGTGCCGGAGATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CAA 90 bp AGAATCGTTTGGATCACCGTGATCTCCGGCACTGGCGTGATCTTCTaGAACCCAAAGCGCAACTTGTCCAGGCACGTGGGCAGGTACTTG +
Preference number: 6 (lower is better)
Translates to: RIVWITVISGTGVIF*NPKRNLSRHVGRYL
Trigger: CAAGTACCTGCCCACGTGCCTGGACAAGTTGCGCTTTGGGTTCAAGAAGATCACGCCAGTGCCGGAGATCACGGTGATCCAAACGATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CAA 90 bp GGCGTTAAGTTCGGCAATCTTGTTTTTGATCCGGGACAGCTTCTCTaGTGCCTCTGCCAGCTCTGCATTAGCCTCCTCCAGTGCCTGCCT +
Preference number: 6 (lower is better)
Translates to: GVKFGNLVFDPGQLL*CLCQLCISLLQCLP
Trigger: AGGCAGGCACTGGAGGAGGCTAATGCAGAGCTGGCAGAGGCACAAGAGAAGCTGTCCCGGATCAAAAACAAGATTGCCGAACTTAACGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 90 bp AGGCGGATGGCTTTCAGTTCACTCCTGTATTTGTTTTTGATCCACTaGATTCCTTGGAGCTGGGCGTCCACGATCAGCGGCCACCGCTCG +
Preference number: 6 (lower is better)
Translates to: RRMAFSSLLYLFLIH*IPWSWASTISGHRS
Trigger: CGAGCGGTGGCCGCTGATCGTGGACGCCCAGCTCCAAGGAATCAAGTGGATCAAAAACAAATACAGGAGTGAACTGAAAGCCATCCGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
ENST00000592152.1
CDS TCA 72 bp GGACGATGGAGGCAACTTCCTCCAGATACTCTAGTCTaGCGTCCGGGGCCATTGTCATCTTGGCCTTTCCTT +
Preference number: 6 (lower is better)
Translates to: GRWRQLPPDTLV*RPGPLSSWPFL
Trigger: AAGGAAAGGCCAAGATGACAATGGCCCCGGACGTCAGACTAGAGTATCTGGAGGAAGTTGCCTCCATCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 72 bp AGCCACACTTCCACCTGCCCCGAGAGGTCGCATTCCTaGTCAAAAACCATGTACTCGTCCTCCTTGCTGTAC +
Preference number: 6 (lower is better)
Translates to: SHTSTCPERSHS*SKTMYSSSLLY
Trigger: GTACAGCAAGGAGGACGAGTACATGGTTTTTGATCAGGAATGCGACCTCTCGGGGCAGGTGGAAGTGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000587177.1
CDS TCA 72 bp CGGGGAGACTCCAGGATGCGATTAATCCTGCAGATGTaGGCCACGGCGTCCTCAAACAGCACCAAATTCATG +
Preference number: 6 (lower is better)
Translates to: RGDSRMRLILQM*ATASSNSTKFM
Trigger: CATGAATTTGGTGCTGTTTGAGGACGCCGTGGCTCACATCTGCAGGATTAATCGCATCCTGGAGTCTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS GCA 72 bp CATCTCGTCATACTTCTGATAGGTCAGCTTGGCCTCTaGTCCAGACATGACCGGGTGTTCGACGTGCTTCAG +
Preference number: 6 (lower is better)
Translates to: HLVILLIGQLGL*SRHDRVFDVLQ
Trigger: CTGAAGCACGTCGAACACCCGGTCATGTCTGGAGCAGAGGCCAAGCTGACCTATCAGAAGTATGACGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS GCA 72 bp GGTTTGCTTCAGGGGCTCAAACATGTTGTCGGTGGCTaGTTGCCTCTCCTTGACTTTCATCAGGTGCCCCAT +
Preference number: 6 (lower is better)
Translates to: GLLQGLKHVVGG*LPLLDFHQVPH
Trigger: ATGGGGCACCTGATGAAAGTCAAGGAGAGGCAAGCAGCCACCGACAACATGTTTGAGCCCCTGAAGCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 72 bp GGCGACTACCACGTAGGGGGTCTTTTCCGCTGCCTTTaGCATGATCTCAGCCATGTTGAAAGTCTCCGGAAT +
Preference number: 6 (lower is better)
Translates to: GDYHVGGLFRCL*HDLSHVESLRN
Trigger: ATTCCGGAGACTTTCAACATGGCTGAGATCATGGCAAAGGCAGCGGAAAAGACCCCCTACGTGGTAGTCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000586850.1
ENST00000590227.5
ENST00000591369.5
ENST00000592192.2
CDS CCA 72 bp CTGTGGACCTGCTTCACGATGTCTTCCGAGACCACCTaGGGCCATCCAGCCATGTTCTCACTTTGGTTTAAC +
Preference number: 6 (lower is better)
Translates to: LWTCFTMSSETT*GHPAMFSLWFN
Trigger: GTTAAACCAAAGTGAGAACATGGCTGGATGGCCCCAGGTGGTCTCGGAAGACATCGTGAAGCAGGTCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 72 bp GGGCCTCCAGTTTATTGTAGAGGCCGGGTTTGCTGGTaGCTTCCACCACGTTGGGTGTTTTCACTGCATCTT +
Preference number: 6 (lower is better)
Translates to: GPPVYCRGRVCW*LPPRWVFSLHL
Trigger: AAGATGCAGTGAAAACACCCAACGTGGTGGAAGCCACCAGCAAACCCGGCCTCTACAATAAACTGGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000587177.1
CDS CCA 72 bp GTTTCCCGAGTGTCATTCATGCCAAGGGACTTGACTTaGGGTCGCATGGAGGAGATGATGTTCTCCACCTCG +
Preference number: 6 (lower is better)
Translates to: VSRVSFMPRDLT*GRMEEMMFSTS
Trigger: CGAGGTGGAGAACATCATCTCCTCCATGCGACCCCAAGTCAAGTCCCTTGGCATGAATGACACTCGGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CCA 72 bp GCAGCTTCATCAGGCCGTTCTCCAGCCTCTCGATTTTaGCAACAAGTTCCGTTCTCTTCTTGGCCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: AASSGRSPASRF*QQVPFSSWPAG
Trigger: ACCTGCTGGCCAAGAAGAGAACGGAACTTGTTGCCAAAATCGAGAGGCTGGAGAACGGCCTGATGAAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 72 bp TCGATGATGGTGGTTTCAATGGCGTGCAGGAGCAAGTaGTCCAGTGAAGAGGGGATCCTCTCCATGGACTCC +
Preference number: 6 (lower is better)
Translates to: SMMVVSMACRSK*SSEEGILSMDS
Trigger: GGAGTCCATGGAGAGGATCCCCTCTTCACTGGACAACTTGCTCCTGCACGCCATTGAAACCACCATCATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp GTGCAGATGGTCATGATCTTCATCCTGTCGCCAGCGTaGAGGTTCCCCATGAGCAGCGTGATGAGTACGTTC +
Preference number: 6 (lower is better)
Translates to: VQMVMIFILSPA*RFPMSSVMSTF
Trigger: GAACGTACTCATCACGCTGCTCATGGGGAACCTCAACGCTGGCGACAGGATGAAGATCATGACCATCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp ACCACCTTCAGCACGAAGCTGTCCTCCGCCTGCAGCTaGAGCTCCACGATGCTCTGCTTGATGATCTTTTCA +
Preference number: 6 (lower is better)
Translates to: TTFSTKLSSACS*SSTMLCLMIFS
Trigger: TGAAAAGATCATCAAGCAGAGCATCGTGGAGCTCAAGCTGCAGGCGGAGGACAGCTTCGTGCTGAAGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp TGCAGCTTCATCAGGCCGTTCTCCAGCCTCTCGATTTaGGCAACAAGTTCCGTTCTCTTCTTGGCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: CSFIRPFSSLSI*ATSSVLFLASR
Trigger: CCTGCTGGCCAAGAAGAGAACGGAACTTGTTGCCAAAATCGAGAGGCTGGAGAACGGCCTGATGAAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 90 bp TCCAGCTGCACCACCTTCAGCACGAAGCTGTCCTCCGCCTGCAGCTaGAGCTCCACGATGCTCTGCTTGATGATCTTTTCAAAATTCAGG +
Preference number: 6 (lower is better)
Translates to: SSCTTFSTKLSSACS*SSTMLCLMIFSKFR
Trigger: CCTGAATTTTGAAAAGATCATCAAGCAGAGCATCGTGGAGCTCAAGCTGCAGGCGGAGGACAGCTTCGTGCTGAAGGTGGTGCAGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 90 bp TTCTTGAACCCAAAGCGCAACTTGTCCAGGCACGTGGGCAGGTACTaGTCAAAGAGGATCATCAGGTTGGCCTTCTCCGACTGCACCTTG +
Preference number: 6 (lower is better)
Translates to: FLNPKRNLSRHVGRY*SKRIIRLAFSDCTL
Trigger: CAAGGTGCAGTCGGAGAAGGCCAACCTGATGATCCTCTTTGACAAGTACCTGCCCACGTGCCTGGACAAGTTGCGCTTTGGGTTCAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS TCA 72 bp CCTGGATCAGTTGGTCTGCGCTCTCATTCTTCTGCTTaGGCTCAGCCTCCTGAATCGCCAACTTGGCTTTCA +
Preference number: 6 (lower is better)
Translates to: PGSVGLRSHSSA*AQPPESPTWLS
Trigger: TGAAAGCCAAGTTGGCGATTCAGGAGGCTGAGCTCAAGCAGAAGAATGAGAGCGCAGACCAACTGATCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CCA 72 bp TCCGGGCTCAGGAAGGTTCGTGTCATCTCGATGATTTaGTTGCAGAACTCCTGCAGGATGACGATGATCCTG +
Preference number: 6 (lower is better)
Translates to: SGLRKVRVISMI*LQNSCRMTMIL
Trigger: CAGGATCATCGTCATCCTGCAGGAGTTCTGCAACCAAATCATCGAGATGACACGAACCTTCCTGAGCCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS CCA 72 bp GCGGAGGACTTGATACAGCTGCAGTCATCAAATCCTTaGCAAAAGATCGTGGCCAGCCTCCTATCCAGGTCT +
Preference number: 6 (lower is better)
Translates to: AEDLIQLQSSNP*QKIVASLLSRS
Trigger: AGACCTGGATAGGAGGCTGGCCACGATCTTTTGCCAAGGATTTGATGACTGCAGCTGTATCAAGTCCTCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS CAA 72 bp GAGGCCGCCATCTGGGCATCGTACAAGATCTTAGCATaGTCTAGCTCAGCGTCAAACAGCTCCAGCATGACT +
Preference number: 6 (lower is better)
Translates to: EAAIWASYKILA*SSSASNSSSMT
Trigger: AGTCATGCTGGAGCTGTTTGACGCTGAGCTAGACAATGCTAAGATCTTGTACGATGCCCAGATGGCGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS CAA 72 bp AGCAGCTCGATGGTTTGCTTCAGGGGCTCAAACATGTaGTCGGTGGCTGCTTGCCTCTCCTTGACTTTCATC +
Preference number: 6 (lower is better)
Translates to: SSSMVCFRGSNM*SVAACLSLTFI
Trigger: GATGAAAGTCAAGGAGAGGCAAGCAGCCACCGACAACATGTTTGAGCCCCTGAAGCAAACCATCGAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp TGTTTCCCGAGTGTCATTCATGCCAAGGGACTTGACTaGGGGTCGCATGGAGGAGATGATGTTCTCCACCTC +
Preference number: 6 (lower is better)
Translates to: CFPSVIHAKGLD*GSHGGDDVLHL
Trigger: GAGGTGGAGAACATCATCTCCTCCATGCGACCCCAAGTCAAGTCCCTTGGCATGAATGACACTCGGGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 72 bp TTCGGCAATCTTGTTTTTGATCCGGGACAGCTTCTCTaGTGCCTCTGCCAGCTCTGCATTAGCCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: FGNLVFDPGQLL*CLCQLCISLLQ
Trigger: CTGGAGGAGGCTAATGCAGAGCTGGCAGAGGCACAAGAGAAGCTGTCCCGGATCAAAAACAAGATTGCCGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 72 bp GGGTTGAAGTACTTGGTGTGTAGGATCAGGCGGAACTaGGGGTGGTACTCCACCTCCTTGTCACCGATCTTA +
Preference number: 6 (lower is better)
Translates to: GLKYLVCRIRRN*GWYSTSLSPIL
Trigger: TAAGATCGGTGACAAGGAGGTGGAGTACCACCCCAAGTTCCGCCTGATCCTACACACCAAGTACTTCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
ENST00000592152.1
CDS CAA 72 bp CGCTTGGCAGATCCTTCGATGTCACTGTCCAGATTTTaGAACTCATCCATCTCCGAGAGGGCCTTGATCCCG +
Preference number: 6 (lower is better)
Translates to: RLADPSMSLSRF*NSSISERALIP
Trigger: CGGGATCAAGGCCCTCTCGGAGATGGATGAGTTCAAAAATCTGGACAGTGACATCGAAGGATCTGCCAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000590227.5
ENST00000591369.5
CDS CAA 90 bp CTTCCAACATGTTTCCCGAGTGTCATTCATGCCAAGGGACTTGACTaGGGGTCGCATGGAGGAGATGATGTTCTCCACCTCGTCCTCCAT +
Preference number: 6 (lower is better)
Translates to: LPTCFPSVIHAKGLD*GSHGGDDVLHLVLH
Trigger: ATGGAGGACGAGGTGGAGAACATCATCTCCTCCATGCGACCCCAAGTCAAGTCCCTTGGCATGAATGACACTCGGGAAACATGTTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 90 bp AAGAACTTCCAACATGTTTCCCGAGTGTCATTCATGCCAAGGGACTaGACTTGGGGTCGCATGGAGGAGATGATGTTCTCCACCTCGTCC +
Preference number: 6 (lower is better)
Translates to: KNFQHVSRVSFMPRD*TWGRMEEMMFSTSS
Trigger: GGACGAGGTGGAGAACATCATCTCCTCCATGCGACCCCAAGTCAAGTCCCTTGGCATGAATGACACTCGGGAAACATGTTGGAAGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 90 bp CGAACGGCGCATTTCGTTGGTCAGGATGTTCATTCTTTCACATTCTaGAAAGGCGACTACCACGTAGGGGGTCTTTTCCGCTGCCTTTGC +
Preference number: 6 (lower is better)
Translates to: RTAHFVGQDVHSFTF*KGDYHVGGLFRCLC
Trigger: GCAAAGGCAGCGGAAAAGACCCCCTACGTGGTAGTCGCCTTTCAAGAATGTGAAAGAATGAACATCCTGACCAACGAAATGCGCCGTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000586850.1
ENST00000590227.5
ENST00000591369.5
ENST00000592192.2
CDS TCA 72 bp GGCCCCCACACATGTACAGGAGCTTTGCGGAGGACTTaGTACAGCTGCAGTCATCAAATCCTTGGCAAAAGA +
Preference number: 6 (lower is better)
Translates to: GPHTCTGALRRT*YSCSHQILGKR
Trigger: TCTTTTGCCAAGGATTTGATGACTGCAGCTGTATCAAGTCCTCCGCAAAGCTCCTGTACATGTGTGGGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS TCA 72 bp CATAATCCTTCCAGGGCAGGCTCAGTGTGTCTGCCCTaGATAGTTCTGCGTTTTCTGCAACCATGGCTTGGA +
Preference number: 6 (lower is better)
Translates to: HNPSRAGSVCLP*IVLRFLQPWLG
Trigger: TCCAAGCCATGGTTGCAGAAAACGCAGAACTATTCAGGGCAGACACACTGAGCCTGCCCTGGAAGGATTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 72 bp TTGAAAGGCGACTACCACGTAGGGGGTCTTTTCCGCTaGCTTTGCCATGATCTCAGCCATGTTGAAAGTCTC +
Preference number: 6 (lower is better)
Translates to: LKGDYHVGGLFR*LCHDLSHVESL
Trigger: GAGACTTTCAACATGGCTGAGATCATGGCAAAGGCAGCGGAAAAGACCCCCTACGTGGTAGTCGCCTTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000586850.1
ENST00000590227.5
ENST00000591369.5
ENST00000592192.2
CDS CCA 72 bp GTACAGAATCGTTTGGATCACCGTGATCTCCGGCACTaGCGTGATCTTCTTGAACCCAAAGCGCAACTTGTC +
Preference number: 6 (lower is better)
Translates to: VQNRLDHRDLRH*RDLLEPKAQLV
Trigger: GACAAGTTGCGCTTTGGGTTCAAGAAGATCACGCCAGTGCCGGAGATCACGGTGATCCAAACGATTCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CCA 72 bp CTTAAAAGGGAACCGCAGGAGGAAATCCAGCTCCACTaGGTTCAGCTCCTTCTTCATGGACAGGACCTGAAA +
Preference number: 6 (lower is better)
Translates to: LKREPQEEIQLH*VQLLLHGQDLK
Trigger: TTTCAGGTCCTGTCCATGAAGAAGGAGCTGAACCCAGTGGAGCTGGATTTCCTCCTGCGGTTCCCTTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000590227.5
ENST00000591369.5
CDS CAA 72 bp TTCCTTCAGCCCTTCAGTGACGTTGGTGTAAACGTTTaGCAGGGCTGGCCAGTAGCAGCTTTTGGCTTTCTC +
Preference number: 6 (lower is better)
Translates to: FLQPFSDVGVNV*QGWPVAAFGFL
Trigger: GAGAAAGCCAAAAGCTGCTACTGGCCAGCCCTGCAAAACGTTTACACCAACGTCACTGAAGGGCTGAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp CAACATGTTTCCCGAGTGTCATTCATGCCAAGGGACTaGACTTGGGGTCGCATGGAGGAGATGATGTTCTCC +
Preference number: 6 (lower is better)
Translates to: QHVSRVSFMPRD*TWGRMEEMMFS
Trigger: GGAGAACATCATCTCCTCCATGCGACCCCAAGTCAAGTCCCTTGGCATGAATGACACTCGGGAAACATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 72 bp TTGCTCAGGTTGGCGTTAAGTTCGGCAATCTTGTTTTaGATCCGGGACAGCTTCTCTTGTGCCTCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: LLRLALSSAILF*IRDSFSCASAS
Trigger: GCTGGCAGAGGCACAAGAGAAGCTGTCCCGGATCAAAAACAAGATTGCCGAACTTAACGCCAACCTGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 72 bp GTCTTTTCCGCTGCCTTTGCCATGATCTCAGCCATGTaGAAAGTCTCCGGAATCTTCTCCAGGATGTCGTCC +
Preference number: 6 (lower is better)
Translates to: VFSAAFAMISAM*KVSGIFSRMSS
Trigger: GGACGACATCCTGGAGAAGATTCCGGAGACTTTCAACATGGCTGAGATCATGGCAAAGGCAGCGGAAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000586850.1
ENST00000590227.5
ENST00000591369.5
ENST00000592192.2
CDS CAA 90 bp ACTTCCTCCAGATACTCTAGTCTGACGTCCGGGGCCATTGTCATCTaGGCCTTTCCTTACACTGTGTATCAGCTGAAGGCAAACAGCTTC +
Preference number: 6 (lower is better)
Translates to: TSSRYSSLTSGAIVI*AFPYTVYQLKANSF
Trigger: GAAGCTGTTTGCCTTCAGCTGATACACAGTGTAAGGAAAGGCCAAGATGACAATGGCCCCGGACGTCAGACTAGAGTATCTGGAGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 90 bp CCGTTCTCCAGCCTCTCGATTTTGGCAACAAGTTCCGTTCTCTTCTaGGCCAGCAGGTTCTGGTACAGTTTGATCTGCTCCAGAAAGGTT +
Preference number: 6 (lower is better)
Translates to: PFSSLSILATSSVLF*ASRFWYSLICSRKV
Trigger: AACCTTTCTGGAGCAGATCAAACTGTACCAGAACCTGCTGGCCAAGAAGAGAACGGAACTTGTTGCCAAAATCGAGAGGCTGGAGAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS TCA 72 bp CCGTTCTCTTCTTGGCCAGCAGGTTCTGGTACAGTTTaGTCTGCTCCAGAAAGGTTTTGGGTGTGGTGTAGT +
Preference number: 6 (lower is better)
Translates to: PFSSWPAGSGTV*SAPERFWVWCS
Trigger: ACTACACCACACCCAAAACCTTTCTGGAGCAGATCAAACTGTACCAGAACCTGCTGGCCAAGAAGAGAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS TCA 72 bp CATCTGTCAGCAGGCTCAAGGGATCCAGGCCATTCGTaGTCGGGATGGGGACCTTTAAGTTATGTATGTAAG +
Preference number: 6 (lower is better)
Translates to: HLSAGSRDPGHS*SGWGPLSYVCK
Trigger: CTTACATACATAACTTAAAGGTCCCCATCCCGATCACGAATGGCCTGGATCCCTTGAGCCTGCTGACAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000591369.5
ENST00000592152.1
CDS CAA 72 bp TCGAGCCCCACGAAGGCATCCCAGGTTTTCATCTCCTaGTCCAAAGACCTCATGTCCTTGGCAAACTTCTTA +
Preference number: 6 (lower is better)
Translates to: SSPTKASQVFIS*SKDLMSLANFL
Trigger: TAAGAAGTTTGCCAAGGACATGAGGTCTTTGGACAAGGAGATGAAAACCTGGGATGCCTTCGTGGGGCTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp AGCCTCTCGATTTTGGCAACAAGTTCCGTTCTCTTCTaGGCCAGCAGGTTCTGGTACAGTTTGATCTGCTCC +
Preference number: 6 (lower is better)
Translates to: SLSILATSSVLF*ASRFWYSLICS
Trigger: GGAGCAGATCAAACTGTACCAGAACCTGCTGGCCAAGAAGAGAACGGAACTTGTTGCCAAAATCGAGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 72 bp CGGTTCTGCTTTGGCCAGGTCTGTTTCACAGGCCTTTaGCTTCTCAGTGACGTTCTTATTGATGACCTCGAC +
Preference number: 6 (lower is better)
Translates to: RFCFGQVCFTGL*LLSDVLIDDLD
Trigger: GTCGAGGTCATCAATAAGAACGTCACTGAGAAGCAAAAGGCCTGTGAAACAGACCTGGCCAAAGCAGAACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 90 bp ACGGTGTTGTCGAGCCCCACGAAGGCATCCCAGGTTTTCATCTCCTaGTCCAAAGACCTCATGTCCTTGGCAAACTTCTTACAATCTATG +
Preference number: 6 (lower is better)
Translates to: TVLSSPTKASQVFIS*SKDLMSLANFLQSM
Trigger: CATAGATTGTAAGAAGTTTGCCAAGGACATGAGGTCTTTGGACAAGGAGATGAAAACCTGGGATGCCTTCGTGGGGCTCGACAACACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 72 bp TTTGCTGGTGGCTTCCACCACGTTGGGTGTTTTCACTaGATCTTCCATCAAGGCCTTGAATTCCTGGTTGAT +
Preference number: 6 (lower is better)
Translates to: FAGGFHHVGCFH*IFHQGLEFLVD
Trigger: ATCAACCAGGAATTCAAGGCCTTGATGGAAGATGCAGTGAAAACACCCAACGTGGTGGAAGCCACCAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000587177.1
CDS GCA 72 bp CTCCTTCTTCATGGACAGGACCTGAAACGTAACTTGTaGCAGGAAAATGAGTTTGTCCCTCTCGAAGAGTCC +
Preference number: 6 (lower is better)
Translates to: LLLHGQDLKRNL*QENEFVPLEES
Trigger: GGACTCTTCGAGAGGGACAAACTCATTTTCCTGGCACAAGTTACGTTTCAGGTCCTGTCCATGAAGAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000590227.5
ENST00000591369.5
CDS CCA 72 bp TGTTCAGAGGAGCCATGTCGGTTACAGGAACATATTTaGGATCGCCAATCCCTTGAGCAAAGTGGCAGAAGA +
Preference number: 6 (lower is better)
Translates to: CSEEPCRLQEHI*DRQSLEQSGRR
Trigger: TCTTCTGCCACTTTGCTCAAGGGATTGGCGATCCCAAATATGTTCCTGTAACCGACATGGCTCCTCTGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CCA 72 bp GCAACAAGTTCCGTTCTCTTCTTGGCCAGCAGGTTCTaGTACAGTTTGATCTGCTCCAGAAAGGTTTTGGGT +
Preference number: 6 (lower is better)
Translates to: ATSSVLFLASRF*YSLICSRKVLG
Trigger: ACCCAAAACCTTTCTGGAGCAGATCAAACTGTACCAGAACCTGCTGGCCAAGAAGAGAACGGAACTTGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CCA 72 bp GCCACCACCTCTTGTCCCTGCCCCAGGGACACATTATaGAGTTTTCCATTGTCTATGGTAAACCCTAGTTTT +
Preference number: 6 (lower is better)
Translates to: ATTSCPCPRDTL*SFPLSMVNPSF
Trigger: AAAACTAGGGTTTACCATAGACAATGGAAAACTCCATAATGTGTCCCTGGGGCAGGGACAAGAGGTGGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000590227.5
ENST00000591369.5
CDS GCA 72 bp CAAAATTCGAGTCTCCAGGGTCCAAGGGATCATATTTaGAGTCGGCAAAAACCTTCACCAGCTCAAAGACCT +
Preference number: 6 (lower is better)
Translates to: QNSSLQGPRDHI*SRQKPSPAQRP
Trigger: AGGTCTTTGAGCTGGTGAAGGTTTTTGCCGACTGCAAATATGATCCCTTGGACCCTGGAGACTCGAATTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS GCA 72 bp GTCATCTGTCCAGGTGTCCAAGTCCTCCGCAGTGACTaGACACCCATATATCAGGAAATTCTTCATAAACTC +
Preference number: 6 (lower is better)
Translates to: VICPGVQVLRSD*TPIYQEILHKL
Trigger: GAGTTTATGAAGAATTTCCTGATATATGGGTGTGCAGTCACTGCGGAGGACTTGGACACCTGGACAGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 72 bp CAGAGTAACAGGTTGCATAAGGGCCCTGCAGTGTCATaGTTGGGTTGTGGAATTACAGGTAAATTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: QSNRLHKGPAVS*LGCGITGKFSF
Trigger: GAAGGAGAATTTACCTGTAATTCCACAACCCAAGCATGACACTGCAGGGCCCTTATGCAACCTGTTACTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587177.1
CDS CAA 72 bp TCAAAATTCGAGTCTCCAGGGTCCAAGGGATCATATTaGCAGTCGGCAAAAACCTTCACCAGCTCAAAGACC +
Preference number: 6 (lower is better)
Translates to: SKFESPGSKGSY*QSAKTFTSSKT
Trigger: GGTCTTTGAGCTGGTGAAGGTTTTTGCCGACTGCAAATATGATCCCTTGGACCCTGGAGACTCGAATTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS CAA 72 bp AGGATCAGGCGGAACTTGGGGTGGTACTCCACCTCCTaGTCACCGATCTTAATGTACTTTCCCTTTTTAATC +
Preference number: 6 (lower is better)
Translates to: RIRRNLGWYSTS*SPILMYFPFLI
Trigger: GATTAAAAAGGGAAAGTACATTAAGATCGGTGACAAGGAGGTGGAGTACCACCCCAAGTTCCGCCTGATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
ENST00000592152.1
CDS CAA 72 bp GACTTAGAAAACTCAACACTCCGGCCTTCCACGAACTaGCTGCCCATCTTTTCCTCCACGAAGTTCTTGATA +
Preference number: 6 (lower is better)
Translates to: DLENSTLRPSTN*LPIFSSTKFLI
Trigger: TATCAAGAACTTCGTGGAGGAAAAGATGGGCAGCAAGTTCGTGGAAGGCCGGAGTGTTGAGTTTTCTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000590227.5
ENST00000591369.5
CDS CAA 72 bp CATTTCGTTGGTCAGGATGTTCATTCTTTCACATTCTaGAAAGGCGACTACCACGTAGGGGGTCTTTTCCGC +
Preference number: 6 (lower is better)
Translates to: HFVGQDVHSFTF*KGDYHVGGLFR
Trigger: GCGGAAAAGACCCCCTACGTGGTAGTCGCCTTTCAAGAATGTGAAAGAATGAACATCCTGACCAACGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000586850.1
ENST00000590227.5
ENST00000591369.5
ENST00000592192.2
CDS CAA 90 bp ATGGTGACTCTATGCAATGTTTCCTGGTCTTTTTCGTCAACCATTTaGTCACCATACACTCGTTCAGTCTCATGTAGCCAAAGGCGGACG +
Preference number: 6 (lower is better)
Translates to: MVTLCNVSWSFSSTI*SPYTRSVSCSQRRT
Trigger: CGTCCGCCTTTGGCTACATGAGACTGAACGAGTGTATGGTGACAAAATGGTTGACGAAAAAGACCAGGAAACATTGCATAGAGTCACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 72 bp GGTCAAATTCATCTAAGACCATGTCGTCAATGTAGATaGCATAATCCTTCCAGGGCAGGCTCAGTGTGTCTG +
Preference number: 6 (lower is better)
Translates to: GQIHLRPCRQCR*HNPSRAGSVCL
Trigger: CAGACACACTGAGCCTGCCCTGGAAGGATTATGTCATCTACATTGACGACATGGTCTTAGATGAATTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp TCTATGTCCATCTGCTCAACGTTGATATCTTTCCACTaGGTGGTCTTCCAGTCCTCGATGCTGGTATTTACC +
Preference number: 6 (lower is better)
Translates to: SMSICSTLISFH*VVFQSSMLVFT
Trigger: GGTAAATACCAGCATCGAGGACTGGAAGACCACCAAGTGGAAAGATATCAACGTTGAGCAGATGGACATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp GTCGGTTACAGGAACATATTTGGGATCGCCAATCCCTaGAGCAAAGTGGCAGAAGATATTTGGCTTGGCAAA +
Preference number: 6 (lower is better)
Translates to: VGYRNIFGIANP*SKVAEDIWLGK
Trigger: TTTGCCAAGCCAAATATCTTCTGCCACTTTGCTCAAGGGATTGGCGATCCCAAATATGTTCCTGTAACCGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS CAA 72 bp GTTGCTTTTTCAAACGCTGAGGTTAGGTTGCTCAGGTaGGCGTTAAGTTCGGCAATCTTGTTTTTGATCCGG +
Preference number: 6 (lower is better)
Translates to: VAFSNAEVRLLR*ALSSAILFLIR
Trigger: CCGGATCAAAAACAAGATTGCCGAACTTAACGCCAACCTGAGCAACCTAACCTCAGCGTTTGAAAAAGCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 72 bp GTTGCTTTTTCAAACGCTGAGGTTAGGTTGCTCAGGTaGGCGTTAAGTTCCTGCAAAACCAAGTTGGAAAGC +
Preference number: 6 (lower is better)
Translates to: VAFSNAEVRLLR*ALSSCKTKLES
Trigger: GCTTTCCAACTTGGTTTTGCAGGAACTTAACGCCAACCTGAGCAACCTAACCTCAGCGTTTGAAAAAGCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592152.1
CDS CAA 72 bp TTCTCAGCTGTTGCTTTTTCAAACGCTGAGGTTAGGTaGCTCAGGTTGGCGTTAAGTTCCTGCAAAACCAAG +
Preference number: 6 (lower is better)
Translates to: FSAVAFSNAEVR*LRLALSSCKTK
Trigger: CTTGGTTTTGCAGGAACTTAACGCCAACCTGAGCAACCTAACCTCAGCGTTTGAAAAAGCAACAGCTGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592152.1
CDS CAA 90 bp ATGTCCTTGGCAAACTTCTTACAATCTATGTCCATCTGCTCAACGTaGATATCTTTCCACTTGGTGGTCTTCCAGTCCTCGATGCTGGTA +
Preference number: 6 (lower is better)
Translates to: MSLANFLQSMSICST*ISFHLVVFQSSMLV
Trigger: TACCAGCATCGAGGACTGGAAGACCACCAAGTGGAAAGATATCAACGTTGAGCAGATGGACATAGATTGTAAGAAGTTTGCCAAGGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 72 bp TCGGTTACAGGAACATATTTGGGATCGCCAATCCCTTaGGCAAAGTGGCAGAAGATATTTGGCTTGGCAAAT +
Preference number: 6 (lower is better)
Translates to: SVTGTYLGSPIP*AKWQKIFGLAN
Trigger: ATTTGCCAAGCCAAATATCTTCTGCCACTTTGCTCAAGGGATTGGCGATCCCAAATATGTTCCTGTAACCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS GCA 72 bp CCCAAGCTCGATTTTCTCCAGCTTCAGAAACTCAATTaGTGTTTTATAGAGTTCCTCAATGGTCTGGATGCG +
Preference number: 6 (lower is better)
Translates to: PKLDFLQLQKLN*CFIEFLNGLDA
Trigger: CGCATCCAGACCATTGAGGAACTCTATAAAACAGCAATTGAGTTTCTGAAGCTGGAGAAAATCGAGCTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS CCA 72 bp GTAACAGGTTGCATAAGGGCCCTGCAGTGTCATGCTTaGGTTGTGGAATTACAGGTAAATTCTCCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: VTGCIRALQCHA*VVELQVNSPSF
Trigger: AAAAGAAGGAGAATTTACCTGTAATTCCACAACCCAAGCATGACACTGCAGGGCCCTTATGCAACCTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587177.1
CDS CAA 72 bp GCAAACTTCTTACAATCTATGTCCATCTGCTCAACGTaGATATCTTTCCACTTGGTGGTCTTCCAGTCCTCG +
Preference number: 6 (lower is better)
Translates to: ANFLQSMSICST*ISFHLVVFQSS
Trigger: CGAGGACTGGAAGACCACCAAGTGGAAAGATATCAACGTTGAGCAGATGGACATAGATTGTAAGAAGTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp TTCTCAGCTGTTGCTTTTTCAAACGCTGAGGTTAGGTaGCTCAGGTTGGCGTTAAGTTCGGCAATCTTGTTT +
Preference number: 6 (lower is better)
Translates to: FSAVAFSNAEVR*LRLALSSAILF
Trigger: AAACAAGATTGCCGAACTTAACGCCAACCTGAGCAACCTAACCTCAGCGTTTGAAAAAGCAACAGCTGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS CAA 72 bp AGTAACAGGTTGCATAAGGGCCCTGCAGTGTCATGCTaGGGTTGTGGAATTACAGGTAAATTCTCCTTCTTT +
Preference number: 6 (lower is better)
Translates to: SNRLHKGPAVSC*GCGITGKFSFF
Trigger: AAAGAAGGAGAATTTACCTGTAATTCCACAACCCAAGCATGACACTGCAGGGCCCTTATGCAACCTGTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587177.1
CDS CAA 90 bp TTCTTACAATCTATGTCCATCTGCTCAACGTTGATATCTTTCCACTaGGTGGTCTTCCAGTCCTCGATGCTGGTATTTACCACAACAACC +
Preference number: 6 (lower is better)
Translates to: FLQSMSICSTLISFH*VVFQSSMLVFTTTT
Trigger: GGTTGTTGTGGTAAATACCAGCATCGAGGACTGGAAGACCACCAAGTGGAAAGATATCAACGTTGAGCAGATGGACATAGATTGTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 72 bp CAAACTTCTTACAATCTATGTCCATCTGCTCAACGTTaGTATCTTTCCACTTGGTGGTCTTCCAGTCCTCGA +
Preference number: 6 (lower is better)
Translates to: QTSYNLCPSAQR*YLSTWWSSSPR
Trigger: TCGAGGACTGGAAGACCACCAAGTGGAAAGATATCAACGTTGAGCAGATGGACATAGATTGTAAGAAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 72 bp CAAGATCATCAAAGAACTTCTTGGTGGAGGCCATGGTaGCTCTATGCAATGTTTCCTGGTCTTTTTCGTCAA +
Preference number: 6 (lower is better)
Translates to: QDHQRTSWWRPW*LYAMFPGLFRQ
Trigger: TTGACGAAAAAGACCAGGAAACATTGCATAGAGTCACCATGGCCTCCACCAAGAAGTTCTTTGATGATCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS GCA 72 bp TCAAAGAACTTCTTGGTGGAGGCCATGGTGACTCTATaGAATGTTTCCTGGTCTTTTTCGTCAACCATTTTG +
Preference number: 6 (lower is better)
Translates to: SKNFLVEAMVTL*NVSWSFSSTIL
Trigger: CAAAATGGTTGACGAAAAAGACCAGGAAACATTGCATAGAGTCACCATGGCCTCCACCAAGAAGTTCTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp TCAAAAATCGTTCCCTGCGAGGGGAACTTGATAGTCTaGAATTCGTTGATCCACCATTTACTGAACTCCACT +
Preference number: 6 (lower is better)
Translates to: SKIVPCEGNLIV*NSLIHHLLNST
Trigger: AGTGGAGTTCAGTAAATGGTGGATCAACGAATTCAAGACTATCAAGTTCCCCTCGCAGGGAACGATTTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000586052.5
CDS TCA 72 bp TCTTCCAGCTCTTTCAGAACAATCTTAAATTCGTTTTaGGACTTGGTGAGGTTTGCCTTCAGCTGTTCCAGA +
Preference number: 6 (lower is better)
Translates to: SSSSFRTILNSF*DLVRFAFSCSR
Trigger: TCTGGAACAGCTGAAGGCAAACCTCACCAAGTCTCAAAACGAATTTAAGATTGTTCTGAAAGAGCTGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389840.7
ENST00000586052.5
ENST00000591369.5
CDS GCA 72 bp CAATTGCTGTTTTATAGAGTTCCTCAATGGTCTGGATaGGCTGGAAGAAGGAATTTATCCTGGAAAAGGCAA +
Preference number: 6 (lower is better)
Translates to: QLLFYRVPQWSG*AGRRNLSWKRQ
Trigger: TTGCCTTTTCCAGGATAAATTCCTTCTTCCAGCGCATCCAGACCATTGAGGAACTCTATAAAACAGCAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389840.7
ENST00000589793.1
CDS CCA 72 bp AGGTTTTCATCTCCTTGTCCAAAGACCTCATGTCCTTaGCAAACTTCTTACAATCTATGTCCATCTGCTCAA +
Preference number: 6 (lower is better)
Translates to: RFSSPCPKTSCP*QTSYNLCPSAQ
Trigger: TTGAGCAGATGGACATAGATTGTAAGAAGTTTGCCAAGGACATGAGGTCTTTGGACAAGGAGATGAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp TCAAACAGGGGAGCGATACTCTCATCTATAACCATGTaGTCCATTAGGAAACTCAGAGATTTGCGAATGAAC +
Preference number: 6 (lower is better)
Translates to: SNRGAILSSITM*SIRKLRDLRMN
Trigger: GTTCATTCGCAAATCTCTGAGTTTCCTAATGGACAACATGGTTATAGATGAGAGTATCGCTCCCCTGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp CTATGCAATGTTTCCTGGTCTTTTTCGTCAACCATTTaGTCACCATACACTCGTTCAGTCTCATGTAGCCAA +
Preference number: 6 (lower is better)
Translates to: LCNVSWSFSSTI*SPYTRSVSCSQ
Trigger: TTGGCTACATGAGACTGAACGAGTGTATGGTGACAAAATGGTTGACGAAAAAGACCAGGAAACATTGCATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 90 bp CATATTTGGGATCGCCAATCCCTTGAGCAAAGTGGCAGAAGATATTaGGCTTGGCAAATAAGAGTTCATCACCAAGATCATCAAAGAACT +
Preference number: 6 (lower is better)
Translates to: HIWDRQSLEQSGRRY*AWQIRVHHQDHQRT
Trigger: AGTTCTTTGATGATCTTGGTGATGAACTCTTATTTGCCAAGCCAAATATCTTCTGCCACTTTGCTCAAGGGATTGGCGATCCCAAATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS TCA 72 bp CCATGTTGTCCATTAGGAAACTCAGAGATTTGCGAATaGACTGGTCAAATTCATCTAAGACCATGTCGTCAA +
Preference number: 6 (lower is better)
Translates to: PCCPLGNSEICE*TGQIHLRPCRQ
Trigger: TTGACGACATGGTCTTAGATGAATTTGACCAGTTCATTCGCAAATCTCTGAGTTTCCTAATGGACAACATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 72 bp CAATCCCTTGAGCAAAGTGGCAGAAGATATTTGGCTTaGCAAATAAGAGTTCATCACCAAGATCATCAAAGA +
Preference number: 6 (lower is better)
Translates to: QSLEQSGRRYLA*QIRVHHQDHQR
Trigger: TCTTTGATGATCTTGGTGATGAACTCTTATTTGCCAAGCCAAATATCTTCTGCCACTTTGCTCAAGGGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CCA 72 bp CAATCCCTTGAGCAAAGTGGCAGAAGATATTTGGCTTaGCAAATAAGAGTTCATCACCAAGATCCTAGAAAA +
Preference number: 6 (lower is better)
Translates to: QSLEQSGRRYLA*QIRVHHQDPRK
Trigger: TTTTCTAGGATCTTGGTGATGAACTCTTATTTGCCAAGCCAAATATCTTCTGCCACTTTGCTCAAGGGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586052.5
CDS CAA 90 bp ATACTCTCATCTATAACCATGTTGTCCATTAGGAAACTCAGAGATTaGCGAATGAACTGGTCAAATTCATCTAAGACCATGTCGTCAATG +
Preference number: 6 (lower is better)
Translates to: ILSSITMLSIRKLRD*RMNWSNSSKTMSSM
Trigger: CATTGACGACATGGTCTTAGATGAATTTGACCAGTTCATTCGCAAATCTCTGAGTTTCCTAATGGACAACATGGTTATAGATGAGAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7
CDS CAA 72 bp TCTATAACCATGTTGTCCATTAGGAAACTCAGAGATTaGCGAATGAACTGGTCAAATTCATCTAAGACCATG +
Preference number: 6 (lower is better)
Translates to: SITMLSIRKLRD*RMNWSNSSKTM
Trigger: CATGGTCTTAGATGAATTTGACCAGTTCATTCGCAAATCTCTGAGTTTCCTAATGGACAACATGGTTATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389840.7