RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAH14 (Homo sapiens)

Ensembl gene IDs: ENSG00000185842

Ensembl transcript IDs: ENST00000327794.10, ENST00000328556.9, ENST00000366849.5, ENST00000366850.7, ENST00000400952.7, ENST00000428003.2, ENST00000430092.5, ENST00000439375.6, ENST00000445597.6, ENST00000450490.1, ENST00000453375.1, ENST00000474801.2, ENST00000495456.1, ENST00000498360.5, ENST00000638635.1, ENST00000682510.1

Found 482 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGATGCCCAGCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTaGAGGGCTCTGCCATCTCCTCTGATGGGGCAGGTCTCTGAAGAG +
Preference number: 1 (lower is better)
Translates to: GCPAWRSWWPSTRPP*RALPSPLMGQVSEE
Trigger: CTCTTCAGAGACCTGCCCCATCAGAGGAGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGCTGGGCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR TCA 90 bp GCCACCCTGGAGGGCTCTGCCATCTCCTCTGATGGGGCAGGTCTCTaGAGAGAAGGGGTGGGCACCGCTGTCCTGAGCTCTCCCTTGATG +
Preference number: 1 (lower is better)
Translates to: ATLEGSAISSDGAGL*REGVGTAVLSSPLM
Trigger: CATCAAGGGAGAGCTCAGGACAGCGGTGCCCACCCCTTCTCTTCAGAGACCTGCCCCATCAGAGGAGATGGCAGAGCCCTCCAGGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR TCA 90 bp ACCGCTGTCCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTaGCACAGGGGAGGCAGTGTGGAACAGCCTGTGCTGTGCCTGGTG +
Preference number: 1 (lower is better)
Translates to: TAVLSSPLMQPGPAC*HRGGSVEQPVLCLV
Trigger: CACCAGGCACAGCACAGGCTGTTCCACACTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGGACAGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CCA 90 bp AGAAGGGGTGGGCACCGCTGTCCTGAGCTCTCCCTTGATGCAGCCTaGGCCAGCTTGTTGACACAGGGGAGGCAGTGTGGAACAGCCTGT +
Preference number: 1 (lower is better)
Translates to: RRGGHRCPELSLDAA*ASLLTQGRQCGTAC
Trigger: ACAGGCTGTTCCACACTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGGACAGCGGTGCCCACCCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR TCA 90 bp CAGCTCCAATTCCAGGTGACTCCAGGTGTGCCTGAGGTAGGCCTGTaGAGCCACATGCTCTCCTGCAGGTGTGCTGGAGGGATGCCCAGC +
Preference number: 1 (lower is better)
Translates to: QLQFQVTPGVPEVGL*SHMLSCRCAGGMPS
Trigger: GCTGGGCATCCCTCCAGCACACCTGCAGGAGAGCATGTGGCTTCACAGGCCTACCTCAGGCACACCTGGAGTCACCTGGAATTGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR TCA 90 bp GTTGACACAGGGGAGGCAGTGTGGAACAGCCTGTGCTGTGCCTGGTaGTGCCTTCTGTGTTGTCCACTCTGGAATGTGACTACCTGGAGG +
Preference number: 1 (lower is better)
Translates to: VDTGEAVWNSLCCAW*CLLCCPLWNVTTWR
Trigger: CCTCCAGGTAGTCACATTCCAGAGTGGACAACACAGAAGGCATCACCAGGCACAGCACAGGCTGTTCCACACTGCCTCCCCTGTGTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR GCA 90 bp AATCACCCGGCCACCGTAAATCACTTCTCCAATCAGGTAGCGCAGTaGTTGCCACGAAATGCTGGGCTGTCCTCTCAGGGAATTTTCCAA +
Preference number: 1 (lower is better)
Translates to: NHPATVNHFSNQVAQ*LPRNAGLSSQGIFQ
Trigger: TTGGAAAATTCCCTGAGAGGACAGCCCAGCATTTCGTGGCAAGCACTGCGCTACCTGATTGGAGAAGTGATTTACGGTGGCCGGGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR TCA 90 bp ATTCTGGGTAGTCTCGGAATCATCTTAGTGCAGTCTGATGAGTGCTaGGGAGAGGAAGACCAGGACCCAGAGGCCAAACAGCATGAGTGT +
Preference number: 1 (lower is better)
Translates to: ILGSLGIILVQSDEC*GEEDQDPEAKQHEC
Trigger: ACACTCATGCTGTTTGGCCTCTGGGTCCTGGTCTTCCTCTCCTCAGCACTCATCAGACTGCACTAAGATGATTCCGAGACTACCCAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR TCA 90 bp GAGTGTCCACCACCTCCTCCCACTCCAAATCCCAGAATGCAACTATaGAAGCACCGGAAAACAAGAAGTATCCCCAGTGGACCAGAAACT +
Preference number: 1 (lower is better)
Translates to: ECPPPPPTPNPRMQL*KHRKTRSIPSGPET
Trigger: AGTTTCTGGTCCACTGGGGATACTTCTTGTTTTCCGGTGCTTTCATAGTTGCATTCTGGGATTTGGAGTGGGAGGAGGTGGTGGACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR TCA 90 bp GAAAGCACCGGAAAACAAGAAGTATCCCCAGTGGACCAGAAACTGTaGGAACCCTTAAACGCTCTCCTGACTATGTTGAGTTTCTTTGGC +
Preference number: 1 (lower is better)
Translates to: ESTGKQEVSPVDQKL*EPLNALLTMLSFFG
Trigger: GCCAAAGAAACTCAACATAGTCAGGAGAGCGTTTAAGGGTTCTCACAGTTTCTGGTCCACTGGGGATACTTCTTGTTTTCCGGTGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CCA 90 bp GAAGAAATTCAGTCGCTGGATGAGATCATCAATCCAGGAACTCAGTaGCTTACAAGATCTGTAGGCGTGTTTCTGCCACAATGTAGGCAC +
Preference number: 1 (lower is better)
Translates to: EEIQSLDEIINPGTQ*LTRSVGVFLPQCRH
Trigger: GTGCCTACATTGTGGCAGAAACACGCCTACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGACTGAATTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CCA 90 bp TCAGTGTTGGCTAGCAAGCATCAGTGCCATCATTATCAGGTAGATTaGGATCTTCTAGAGGGCAGAGGCCTTACGTTGTTCATCTCGATA +
Preference number: 1 (lower is better)
Translates to: SVLASKHQCHHYQVD*DLLEGRGLTLFISI
Trigger: TATCGAGATGAACAACGTAAGGCCTCTGCCCTCTAGAAGATCCCAATCTACCTGATAATGATGGCACTGATGCTTGCTAGCCAACACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CCA 90 bp ACTGTGAGAACCCTTAAACGCTCTCCTGACTATGTTGAGTTTCTTTaGCATAAATACGGAGAACTTCTCATCCTTGTCAGTGGTGTTGGA +
Preference number: 1 (lower is better)
Translates to: TVRTLKRSPDYVEFL*HKYGELLILVSGVG
Trigger: TCCAACACCACTGACAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAGAGCGTTTAAGGGTTCTCACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR TCA 90 bp GTCGTGATCTTTGAGATTTTTAGAAAGAGACTCCCAAATGGAGCTTaGCATCATGCTCTTCAATGTGCTTGGAGTTCCAACAGCAATTTC +
Preference number: 1 (lower is better)
Translates to: VVIFEIFRKRLPNGA*HHALQCAWSSNSNF
Trigger: GAAATTGCTGTTGGAACTCCAAGCACATTGAAGAGCATGATGTCAAGCTCCATTTGGGAGTCTCTTTCTAAAAATCTCAAAGATCACGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CAA 90 bp GGGCACCGCTGTCCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTaGTTGACACAGGGGAGGCAGTGTGGAACAGCCTGTGCTGTGCCT +
Preference number: 2 (lower is better)
Translates to: GHRCPELSLDAAWAS*LTQGRQCGTACAVP
Trigger: AGGCACAGCACAGGCTGTTCCACACTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGGACAGCGGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CAA 90 bp CACCGCTGTCCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTaGACACAGGGGAGGCAGTGTGGAACAGCCTGTGCTGTGCCTGGT +
Preference number: 2 (lower is better)
Translates to: HRCPELSLDAAWASL*TQGRQCGTACAVPG
Trigger: ACCAGGCACAGCACAGGCTGTTCCACACTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGGACAGCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR GCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGGTGCTTGCCACGAAATaGTGGGCTGTCCTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: PELSLDAAWASLLTQGRQVLATK*WAVLSG
Trigger: CCCTGAGAGGACAGCCCAGCATTTCGTGGCAAGCAC...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR TCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGGTCCACTCTGGAATGTaGCTACCTGGAGGTGCAAGC +
Preference number: 2 (lower is better)
Translates to: PELSLDAAWASLLTQGRQVHSGM*LPGGAS
Trigger: GCTTGCACCTCCAGGTAGTCACATTCCAGAGTGGAC...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CCA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTCTGTGTTGTCCACTCTaGAATGTGACTACCTGGAGG +
Preference number: 2 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSLCCPL*NVTTWR
Trigger: CCTCCAGGTAGTCACATTCCAGAGTGGACAACACAG...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CCA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTTGCAGATCCTGGAACTaGCAGACATATCCCATCACT +
Preference number: 2 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSCRSWN*QTYPIT
Trigger: AGTGATGGGATATGTCTGCCAGTTCCAGGATCTGCA...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGATAAACTTTTCGCCCTaGGTCTCCCAGCAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: PELSLDAAWASLLTQGRQINFSP*VSQQLL
Trigger: CAGGAGCTGCTGGGAGACCCAGGGCGAAAAGTTTAT...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR TCA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTCTCCCAAATGGAGCTTaGCATCATGCTCTTCAATGT +
Preference number: 2 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSLPNGA*HHALQC
Trigger: ACATTGAAGAGCATGATGTCAAGCTCCATTTGGGAG...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR TCA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTAATTCAGTCGCTGGATaGGATCATCAATCCAGGAAC +
Preference number: 2 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSNSVAG*DHQSRN
Trigger: GTTCCTGGATTGATGATCTCATCCAGCGACTGAATT...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR GCA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTTCATGCTCTTCAATGTaGTTGGAGTTCCAACAGCAA +
Preference number: 2 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSSCSSM*LEFQQQ
Trigger: TTGCTGTTGGAACTCCAAGCACATTGAAGAGCATGA...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CCA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTGGCAGTGGTAGTTTTTaGTTGCATGGCAATCAGATT +
Preference number: 2 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSGSGSF*LHGNQI
Trigger: AATCTGATTGCCATGCAACCAAAAACTACCACTGCC...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CCA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTTCTCATCCTTGTCAGTaGTGTTGGAAATCACATGGT +
Preference number: 2 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSSHPCQ*CWKSHG
Trigger: ACCATGTGATTTCCAACACCACTGACAAGGATGAGA...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGTGGAATGTGACTACCTaGAGGTGCAAGCTGAACTCA +
Preference number: 2 (lower is better)
Translates to: PELSLDAAWASLLTQGRQWNVTT*RCKLNS
Trigger: TGAGTTCAGCTTGCACCTCCAGGTAGTCACATTCCA...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CAA 90 bp GGCAGTGTGGAACAGCCTGTGCTGTGCCTGGTGATGCCTTCTGTGTaGTCCACTCTGGAATGTGACTACCTGGAGGTGCAAGCTGAACTC +
Preference number: 2 (lower is better)
Translates to: GSVEQPVLCLVMPSV*STLECDYLEVQAEL
Trigger: GAGTTCAGCTTGCACCTCCAGGTAGTCACATTCCAGAGTGGACAACACAGAAGGCATCACCAGGCACAGCACAGGCTGTTCCACACTGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR TCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGTGGGAGCCAGTATCTTaGAGGAAACCCTTCAAAGAA +
Preference number: 2 (lower is better)
Translates to: PELSLDAAWASLLTQGRQWEPVS*RKPFKE
Trigger: TTCTTTGAAGGGTTTCCTTCAAGATACTGGCTCCCA...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CAA 90 bp CACCCGGCCACCGTAAATCACTTCTCCAATCAGGTAGCGCAGTGCTaGCCACGAAATGCTGGGCTGTCCTCTCAGGGAATTTTCCAACAC +
Preference number: 2 (lower is better)
Translates to: HPATVNHFSNQVAQC*PRNAGLSSQGIFQH
Trigger: GTGTTGGAAAATTCCCTGAGAGGACAGCCCAGCATTTCGTGGCAAGCACTGCGCTACCTGATTGGAGAAGTGATTTACGGTGGCCGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR GCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGGTATGTAGTCCTTTATaGTTGCAGATCCTGGAACTG +
Preference number: 2 (lower is better)
Translates to: PELSLDAAWASLLTQGRQVCSPL*LQILEL
Trigger: CAGTTCCAGGATCTGCAAGCATAAAGGACTACATAC...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CAA 90 bp GAAGGTGAGGGCATCCACAGCGATTCCTCGGGACCTCCCATAGTCTaGAAGCACAGCAGCAAGAAAGGCTTGTGGAAAGAAGAAAGCTGG +
Preference number: 2 (lower is better)
Translates to: EGEGIHSDSSGPPIV*KHSSKKGLWKEESW
Trigger: CCAGCTTTCTTCTTTCCACAAGCCTTTCTTGCTGCTGTGCTTCAAGACTATGGGAGGTCCCGAGGAATCGCTGTGGATGCCCTCACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR TCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGTGGATAAGGGGGTCGTaGTCTTTGAGATTTTTAGAA +
Preference number: 2 (lower is better)
Translates to: PELSLDAAWASLLTQGRQWIRGS*SLRFLE
Trigger: TTCTAAAAATCTCAAAGATCACGACCCCCTTATCCA...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR GCA 90 bp TCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAGGCGTCTTCAGCTTTAGCTaGTTGGTCACGGCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: SLDEIINPGTQWLTRSVGVFSFS*LVTAQR
Trigger: TCTCTGGGCCGTGACCAAGCAGCTAAAGCTGAAGAC...GCCTACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CCA 90 bp GTCAGTGGTGTTGGAAATCACATGGTGGGTGAAGGTGAGGGCATCCACAGCGATTTACTTTTCAATCCCTaGGGAGATTCCACGGCAATC +
Preference number: 2 (lower is better)
Translates to: VSGVGNHMVGEGEGIHSDLLFNP*GDSTAI
Trigger: GATTGCCGTGGAATCTCCCCAGGGATTGAAAAGTAA...ATCGCTGTGGATGCCCTCACCTTCACCCACCATGTGATTTCCAACACCACTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR TCA 90 bp CCTCCTAGATTCAAGTGTAGTGCTTCCATGAGAGTCAGCCAGCATCGGTCTGTGCGTAATAACCAATCTTaGGGTACAGCCCAAGTACTC +
Preference number: 2 (lower is better)
Translates to: PPRFKCSASMRVSQHRSVRNNQS*GTAQVL
Trigger: GAGTACTTGGGCTGTACCTCAAGATTGGTTATTACG...CACAGACCGATGCTGGCTGACTCTCATGGAAGCACTACACTTGAATCTAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495456.1
3UTR-3UTR CCA 90 bp GTCAGTGGTGTTGGAAATCACATGGTGGGTGAAGGTGAGGGCATCCACAGCGATGGCCCAGAGAAATTATaGTCACATGATGTGTTGTTC +
Preference number: 2 (lower is better)
Translates to: VSGVGNHMVGEGEGIHSDGPEKL*SHDVLF
Trigger: GAACAACACATCATGTGACCATAATTTCTCTGGGCC...ATCGCTGTGGATGCCCTCACCTTCACCCACCATGTGATTTCCAACACCACTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CAA 90 bp CGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCTTCCCCTaGGAGGTCCCCCTGGTTGGAGTTCTAGCAGAATTAGAGTCTAGT +
Preference number: 2 (lower is better)
Translates to: RHHHHQFRSTACVFP*EVPLVGVLAELESS
Trigger: ACTAGACTCTAATTCTGCTAGAACTCCAACCAGGGGGACCTCCAAGGGGAAGACACATGCAGTTGATCTAAATTGATGATGATGGTGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CAA 90 bp GTCGAAAACACATCTGAACCTGAGCTTTCTTCCACGTCAATACTCTaGCCAAGCAGTCACCTGATTTCTCCTAAAGCTCCAGTGACAGGG +
Preference number: 2 (lower is better)
Translates to: VENTSEPELSSTSIL*PSSHLISPKAPVTG
Trigger: CCCTGTCACTGGAGCTTTAGGAGAAATCAGGTGACTGCTTGGCAAGAGTATTGACGTGGAAGAAAGCTCAGGTTCAGATGTGTTTTCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CCA 90 bp TCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAGGCTATGCTTGCAGATCCTaGAACTGGCAGACATATCCC +
Preference number: 2 (lower is better)
Translates to: SLDEIINPGTQWLTRSVGYACRS*NWQTYP
Trigger: GGGATATGTCTGCCAGTTCCAGGATCTGCAAGCATA...GCCTACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CCA 90 bp GTCAGTGGTGTTGGAAATCACATGGTGGGTGAAGGTGAGGGCATCCACAGCGATAAGAAATTCAGTCGCTaGATGAGATCATCAATCCAG +
Preference number: 2 (lower is better)
Translates to: VSGVGNHMVGEGEGIHSDKKFSR*MRSSIQ
Trigger: CTGGATTGATGATCTCATCCAGCGACTGAATTTCTT...ATCGCTGTGGATGCCCTCACCTTCACCCACCATGTGATTTCCAACACCACTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CAA 90 bp TTCTTTGGCATAAATACGGAGAACTTCTCATCCTTGTCAGTGGTGTaGGAAATCACATGGTGGGTGAAGGTGAGGGCATCCACAGCGATT +
Preference number: 2 (lower is better)
Translates to: FFGINTENFSSLSVV*EITWWVKVRASTAI
Trigger: AATCGCTGTGGATGCCCTCACCTTCACCCACCATGTGATTTCCAACACCACTGACAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CAA 90 bp CATTATCAGGTAGATTGGGATCTTCTAGAGGGCAGAGGCCTTACGTaGTTCATCTCGATATTTCCAACAGCCAGAGCAGTTTTGGACCCA +
Preference number: 2 (lower is better)
Translates to: HYQVDWDLLEGRGLT*FISIFPTARAVLDP
Trigger: TGGGTCCAAAACTGCTCTGGCTGTTGGAAATATCGAGATGAACAACGTAAGGCCTCTGCCCTCTAGAAGATCCCAATCTACCTGATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR TCA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTTCTCCCAGCAGCTCCTaGTGGCCTCTGGGTGTATTC +
Preference number: 2 (lower is better)
Translates to: NKQLDKPPVENTSEPELSSPSSS*WPLGVF
Trigger: GAATACACCCAGAGGCCATCAGGAGCTGCTGGGAGA...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR GCA 90 bp CAGTCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAGTAGTCCTTTATGCTTaGAGATCCTGGAACTGGCAG +
Preference number: 2 (lower is better)
Translates to: QSLDEIINPGTQWLTRSVVVLYA*RSWNWQ
Trigger: CTGCCAGTTCCAGGATCTGCAAGCATAAAGGACTAC...TACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CCA 90 bp AAATCCTCAAAACAGTTGAAGACCACACAATGTTTGCCTAAGGATTTTGCTAGATTTTCCTGTACCAGCTaGACCGGCAGGACAGCCTCC +
Preference number: 2 (lower is better)
Translates to: KSSKQLKTTQCLPKDFARFSCTS*TGRTAS
Trigger: GGAGGCTGTCCTGCCGGTCCAGCTGGTACAGGAAAA...TCTAGCAAAATCCTTAGGCAAACATTGTGTGGTCTTCAACTGTTTTGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495456.1
3UTR CAA 90 bp CAGCAAGAAAGGCTTGTGGAAAGAAGAAAGCTGGGAGCCAGTATCTaGAAGGAAACCCTTCAAAGAAATTGTTCTCTGAATCCTCAGGGT +
Preference number: 2 (lower is better)
Translates to: QQERLVERRKLGASI*KETLQRNCSLNPQG
Trigger: ACCCTGAGGATTCAGAGAACAATTTCTTTGAAGGGTTTCCTTCAAGATACTGGCTCCCAGCTTTCTTCTTTCCACAAGCCTTTCTTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CAA 90 bp ACTATGTTGAGTTTCTTTGGCATAAATACGGAGAACTTCTCATCCTaGTCAGTGGTGTTGGAAATCACATGGTGGGTGAAGGTGAGGGCA +
Preference number: 2 (lower is better)
Translates to: TMLSFFGINTENFSS*SVVLEITWWVKVRA
Trigger: TGCCCTCACCTTCACCCACCATGTGATTTCCAACACCACTGACAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR TCA 90 bp AAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCTTCCCCCTTTGGCCCAAGTATTaGAGAAATTCAGTCGCTGGA +
Preference number: 2 (lower is better)
Translates to: KRTRHHHHQFRSTACVFPLWPKY*RNSVAG
Trigger: TCCAGCGACTGAATTTCTTCAATACTTGGGCCAAAG...GGGGAAGACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR GCA 90 bp AAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCTTCCCCAGTTCATCCTTACTCTaGTCAGGTCTGATCATGAGG +
Preference number: 2 (lower is better)
Translates to: KRTRHHHHQFRSTACVFPSSSLL*SGLIMR
Trigger: CCTCATGATCAGACCTGAGCAGAGTAAGGATGAACT...GGGGAAGACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CCA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTCTTGCCACGAAATGCTaGGCTGTCCTCTCAGGGAAT +
Preference number: 2 (lower is better)
Translates to: NKQLDKPPVENTSEPELSLATKC*AVLSGN
Trigger: ATTCCCTGAGAGGACAGCCCAGCATTTCGTGGCAAG...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR TCA 90 bp AAATCCTCAAAACAGTTGAAGACCACACAATGTTTGCCTAAGGATTTTGCTAGAAGTGTAGTGCTTCCATaGGAGTCAGCCAGCATCGGT +
Preference number: 2 (lower is better)
Translates to: KSSKQLKTTQCLPKDFARSVVLP*ESASIG
Trigger: ACCGATGCTGGCTGACTCTCATGGAAGCACTACACT...TCTAGCAAAATCCTTAGGCAAACATTGTGTGGTCTTCAACTGTTTTGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495456.1
3UTR-3UTR CCA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTGCGGAGTTCTGGCATTaGATCCTTTATATGCATCTT +
Preference number: 2 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSAEFWH*ILYMHL
Trigger: AAGATGCATATAAAGGATCCAATGCCAGAACTCCGC...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CCA 90 bp AAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCTTCCCCGTATCAGCGGAGTTCTaGCATTGGATCCTTTATATG +
Preference number: 2 (lower is better)
Translates to: KRTRHHHHQFRSTACVFPVSAEF*HWILYM
Trigger: CATATAAAGGATCCAATGCCAGAACTCCGCTGATAC...GGGGAAGACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CCA 90 bp CTCCTGACTATGTTGAGTTTCTTTGGCATAAATACGGAGAACTTCTCATCCTTGTCAGCTTTAGCTGCTTaGTCACGGCCCAGAGAAATT +
Preference number: 2 (lower is better)
Translates to: LLTMLSFFGINTENFSSLSALAA*SRPREI
Trigger: AATTTCTCTGGGCCGTGACCAAGCAGCTAAAGCTGA...CAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR GCA 90 bp CTCCTGACTATGTTGAGTTTCTTTGGCATAAATACGGAGAACTTCTCATCCTTGATACCGACGCTGTATTaGAGTATAAGCCACTTTGGC +
Preference number: 2 (lower is better)
Translates to: LLTMLSFFGINTENFSSLIPTLY*SISHFG
Trigger: GCCAAAGTGGCTTATACTGCAATACAGCGTCGGTAT...CAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR TCA 90 bp CTCCTGACTATGTTGAGTTTCTTTGGCATAAATACGGAGAACTTCTCATCCTTGAAGCCTTGGCATAAATaGTGTTGCAAGATGGCAGTT +
Preference number: 2 (lower is better)
Translates to: LLTMLSFFGINTENFSSLKPWHK*CCKMAV
Trigger: AACTGCCATCTTGCAACATCATTTATGCCAAGGCTT...CAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR TCA 90 bp GTCTATAAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCCATCACTGGAGAAACTaGAGTCATCTTTCAGCACTT +
Preference number: 2 (lower is better)
Translates to: VYKRTRHHHHQFRSTACVHHWRN*SHLSAL
Trigger: AAGTGCTGAAAGATGACTTCAGTTTCTCCAGTGATG...GACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTTATAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR TCA 90 bp CTCCTGACTATGTTGAGTTTCTTTGGCATAAATACGGAGAACTTCTCATCCTTGACTGCTTCCAAACTGTaGCAAATCTCATATACCGAC +
Preference number: 2 (lower is better)
Translates to: LLTMLSFFGINTENFSSLTASKL*QISYTD
Trigger: GTCGGTATATGAGATTTGTCACAGTTTGGAAGCAGT...CAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CCA 90 bp GTCTATAAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCGCTCTTCAATGTGCTTaGAGTTCCAACAGCAATTTC +
Preference number: 2 (lower is better)
Translates to: VYKRTRHHHHQFRSTACVALQCA*SSNSNF
Trigger: GAAATTGCTGTTGGAACTCCAAGCACATTGAAGAGC...GACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTTATAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR TCA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTGCATTTTTGGCTAGTTaGTGGAATAGACTGCTTCCA +
Preference number: 2 (lower is better)
Translates to: NKQLDKPPVENTSEPELSAFLAS*WNRLLP
Trigger: TGGAAGCAGTCTATTCCATCAACTAGCCAAAAATGC...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR GCA 90 bp TCTCGATATTTCCAACAGCCAGAGCAGTTTTGGACCCATATTTTAAATAAACAGTGGAGCTTGACATCATaGTCTTCAATGTGCTTGGAG +
Preference number: 2 (lower is better)
Translates to: SRYFQQPEQFWTHILNKQWSLTS*SSMCLE
Trigger: CTCCAAGCACATTGAAGAGCATGATGTCAAGCTCCA...CTGTTTATTTAAAATATGGGTCCAAAACTGCTCTGGCTGTTGGAAATATCGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CCA 90 bp TCTCGATATTTCCAACAGCCAGAGCAGTTTTGGACCCATATTTTAAATAAACAGAATCCAGGAACTCAGTaGCTTACAAGATCTGTAGGC +
Preference number: 2 (lower is better)
Translates to: SRYFQQPEQFWTHILNKQNPGTQ*LTRSVG
Trigger: GCCTACAGATCTTGTAAGCCACTGAGTTCCTGGATT...CTGTTTATTTAAAATATGGGTCCAAAACTGCTCTGGCTGTTGGAAATATCGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CCA 90 bp TCTCGATATTTCCAACAGCCAGAGCAGTTTTGGACCCATATTTTAAATAAACAGAAGAAGTATCCCCAGTaGACCAGAAACTGTGAGAAC +
Preference number: 2 (lower is better)
Translates to: SRYFQQPEQFWTHILNKQKKYPQ*TRNCEN
Trigger: GTTCTCACAGTTTCTGGTCCACTGGGGATACTTCTT...CTGTTTATTTAAAATATGGGTCCAAAACTGCTCTGGCTGTTGGAAATATCGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR GCA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTGTTGATGGAATAGACTaGTTCCAAACTGTGACAAAT +
Preference number: 2 (lower is better)
Translates to: NKQLDKPPVENTSEPELSVDGID*FQTVTN
Trigger: ATTTGTCACAGTTTGGAAGCAGTCTATTCCATCAAC...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR GCA 90 bp CTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACAAATAAATTCAAATTTTACTaGGCATCCTATAGCACCGAT +
Preference number: 2 (lower is better)
Translates to: LNLEDRVYLGTELPDITNKFKFY*ASYSTD
Trigger: ATCGGTGCTATAGGATGCGCAGTAAAATTTGAATTT...ATTTGTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
3UTR-3UTR GCA 90 bp TTAAAAACTAACTCTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAAATTCAAATTTTACTaGGCATCCTATAGCACCGAT +
Preference number: 2 (lower is better)
Translates to: LKTNSEPGRQSILRHRIAKFKFY*ASYSTD
Trigger: ATCGGTGCTATAGGATGCGCAGTAAAATTTGAATTT...GGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAGAGTTAGTTTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
3UTR CCA 72 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTaGAGGGCTCTGCCATCTCCTCTGATGGGGCAGGTC +
Preference number: 3 (lower is better)
Translates to: AWRSWWPSTRPP*RALPSPLMGQV
Trigger: GACCTGCCCCATCAGAGGAGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CCA 72 bp GGGCACCGCTGTCCTGAGCTCTCCCTTGATGCAGCCTaGGCCAGCTTGTTGACACAGGGGAGGCAGTGTGGA +
Preference number: 3 (lower is better)
Translates to: GHRCPELSLDAA*ASLLTQGRQCG
Trigger: TCCACACTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGGACAGCGGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR TCA 72 bp CTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTaGCACAGGGGAGGCAGTGTGGAACAGCCTGTGCTG +
Preference number: 3 (lower is better)
Translates to: LSSPLMQPGPAC*HRGGSVEQPVL
Trigger: CAGCACAGGCTGTTCCACACTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR TCA 72 bp GGGGAGGCAGTGTGGAACAGCCTGTGCTGTGCCTGGTaGTGCCTTCTGTGTTGTCCACTCTGGAATGTGACT +
Preference number: 3 (lower is better)
Translates to: GEAVWNSLCCAW*CLLCCPLWNVT
Trigger: AGTCACATTCCAGAGTGGACAACACAGAAGGCATCACCAGGCACAGCACAGGCTGTTCCACACTGCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CAA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGAGCGGAGTTCTGGCATaGGATCCTTTATATGCATCT +
Preference number: 3 (lower is better)
Translates to: PELSLDAAWASLLTQGRQSGVLA*DPLYAS
Trigger: AGATGCATATAAAGGATCCAATGCCAGAACTCCGCT...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CAA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTTGGTCACATGATGTGTaGTTCCTTTTAACTCTTGTG +
Preference number: 3 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSWSHDV*FLLTLV
Trigger: CACAAGAGTTAAAAGGAACAACACATCATGTGACCA...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CAA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGTCTCCTCAGAGTCTTTaGCCTTGTAGGACAAACTCT +
Preference number: 3 (lower is better)
Translates to: PELSLDAAWASLLTQGRQSPQSL*PCRTNS
Trigger: AGAGTTTGTCCTACAAGGCAAAAGACTCTGAGGAGA...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR GCA 72 bp GCCACCGTAAATCACTTCTCCAATCAGGTAGCGCAGTaGTTGCCACGAAATGCTGGGCTGTCCTCTCAGGGA +
Preference number: 3 (lower is better)
Translates to: ATVNHFSNQVAQ*LPRNAGLSSQG
Trigger: TCCCTGAGAGGACAGCCCAGCATTTCGTGGCAAGCACTGCGCTACCTGATTGGAGAAGTGATTTACGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR GCA 72 bp CTTCTCCAATCAGGTAGCGCAGTGCTTGCCACGAAATaGTGGGCTGTCCTCTCAGGGAATTTTCCAACACCT +
Preference number: 3 (lower is better)
Translates to: LLQSGSAVLATK*WAVLSGNFPTP
Trigger: AGGTGTTGGAAAATTCCCTGAGAGGACAGCCCAGCATTTCGTGGCAAGCACTGCGCTACCTGATTGGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CAA 90 bp AATCACTTCTCCAATCAGGTAGCGCAGTGCTTGCCACGAAATGCTGGGCTGTCCTTCAGCTTTAGCTGCTaGGTCACGGCCCAGAGAAAT +
Preference number: 3 (lower is better)
Translates to: NHFSNQVAQCLPRNAGLSFSFSC*VTAQRN
Trigger: ATTTCTCTGGGCCGTGACCAAGCAGCTAAAGCTGAA...GGACAGCCCAGCATTTCGTGGCAAGCACTGCGCTACCTGATTGGAGAAGTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR TCA 72 bp CCACCTCCTCCCACTCCAAATCCCAGAATGCAACTATaGAAGCACCGGAAAACAAGAAGTATCCCCAGTGGA +
Preference number: 3 (lower is better)
Translates to: PPPPTPNPRMQL*KHRKTRSIPSG
Trigger: TCCACTGGGGATACTTCTTGTTTTCCGGTGCTTTCATAGTTGCATTCTGGGATTTGGAGTGGGAGGAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CAA 90 bp CTCCTGACTATGTTGAGTTTCTTTGGCATAAATACGGAGAACTTCTCATCCTTGCAGGTAGCGCAGTGCTaGCCACGAAATGCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: LLTMLSFFGINTENFSSLQVAQC*PRNAGL
Trigger: CAGCCCAGCATTTCGTGGCAAGCACTGCGCTACCTG...CAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CAA 90 bp TTCCTGTACCAGCTGGACCGGCAGGACAGCCTCCTAGATTCAAGTGTAGTGCTTAAAGCTGGCATTTCCTaGAGACACATAGCACAACTT +
Preference number: 3 (lower is better)
Translates to: FLYQLDRQDSLLDSSVVLKAGIS*RHIAQL
Trigger: AAGTTGTGCTATGTGTCTCAAGGAAATGCCAGCTTT...AAGCACTACACTTGAATCTAGGAGGCTGTCCTGCCGGTCCAGCTGGTACAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495456.1
3UTR GCA 72 bp AGTGTCCACCACCTCCTCCCACTCCAAATCCCAGAATaGAACTATGAAAGCACCGGAAAACAAGAAGTATCC +
Preference number: 3 (lower is better)
Translates to: SVHHLLPLQIPE*NYESTGKQEVS
Trigger: GGATACTTCTTGTTTTCCGGTGCTTTCATAGTTGCATTCTGGGATTTGGAGTGGGAGGAGGTGGTGGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CCA 72 bp CAGTCGCTGGATGAGATCATCAATCCAGGAACTCAGTaGCTTACAAGATCTGTAGGCGTGTTTCTGCCACAA +
Preference number: 3 (lower is better)
Translates to: QSLDEIINPGTQ*LTRSVGVFLPQ
Trigger: TTGTGGCAGAAACACGCCTACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CCA 72 bp GCTAGCAAGCATCAGTGCCATCATTATCAGGTAGATTaGGATCTTCTAGAGGGCAGAGGCCTTACGTTGTTC +
Preference number: 3 (lower is better)
Translates to: ASKHQCHHYQVD*DLLEGRGLTLF
Trigger: GAACAACGTAAGGCCTCTGCCCTCTAGAAGATCCCAATCTACCTGATAATGATGGCACTGATGCTTGCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CAA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTGCATGTGTCTTCCCCTaGGAGGTCCCCCTGGTTGGA +
Preference number: 3 (lower is better)
Translates to: NKQLDKPPVENTSEPELSACVFP*EVPLVG
Trigger: TCCAACCAGGGGGACCTCCAAGGGGAAGACACATGC...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CAA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTTGTAGTCCTTTATGCTaGCAGATCCTGGAACTGGCA +
Preference number: 3 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSCSPLC*QILELA
Trigger: TGCCAGTTCCAGGATCTGCAAGCATAAAGGACTACA...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR TCA 72 bp GGAAAACAAGAAGTATCCCCAGTGGACCAGAAACTGTaGGAACCCTTAAACGCTCTCCTGACTATGTTGAGT +
Preference number: 3 (lower is better)
Translates to: GKQEVSPVDQKL*EPLNALLTMLS
Trigger: ACTCAACATAGTCAGGAGAGCGTTTAAGGGTTCTCACAGTTTCTGGTCCACTGGGGATACTTCTTGTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CCA 72 bp GCCACTTTGGCCCAAGTATTGAAGAAATTCAGTCGCTaGATGAGATCATCAATCCAGGAACTCAGTGGCTTA +
Preference number: 3 (lower is better)
Translates to: ATLAQVLKKFSR*MRSSIQELSGL
Trigger: TAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGACTGAATTTCTTCAATACTTGGGCCAAAGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CCA 72 bp GATAATGTGTATGTAGTCCTTTATGCTTGCAGATCCTaGAACTGGCAGACATATCCCATCACTGGAGAAACT +
Preference number: 3 (lower is better)
Translates to: DNVYVVLYACRS*NWQTYPITGET
Trigger: AGTTTCTCCAGTGATGGGATATGTCTGCCAGTTCCAGGATCTGCAAGCATAAAGGACTACATACACATTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CAA 90 bp GTCTATAAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCGTCGATCCCATGAGTTaGAATAAGTATCAGCGGAGT +
Preference number: 3 (lower is better)
Translates to: VYKRTRHHHHQFRSTACVVDPMS*NKYQRS
Trigger: ACTCCGCTGATACTTATTCAAACTCATGGGATCGAC...GACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTTATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CAA 90 bp CAGTCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAAAGAACTGTATGATTTaGAGCTTAACCATAGCCGAA +
Preference number: 3 (lower is better)
Translates to: QSLDEIINPGTQWLTRSVKNCMI*SLTIAE
Trigger: TTCGGCTATGGTTAAGCTCAAAATCATACAGTTCTT...TACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CAA 90 bp CTCCTGACTATGTTGAGTTTCTTTGGCATAAATACGGAGAACTTCTCATCCTTGACTCCCAAATGGAGCTaGACATCATGCTCTTCAATG +
Preference number: 3 (lower is better)
Translates to: LLTMLSFFGINTENFSSLTPKWS*TSCSSM
Trigger: CATTGAAGAGCATGATGTCAAGCTCCATTTGGGAGT...CAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR TCA 72 bp CTGGAACTGGCAGACATATCCCATCACTGGAGAAACTaGAGTCATCTTTCAGCACTTCAGGATTACAAAATT +
Preference number: 3 (lower is better)
Translates to: LELADISHHWRN*SHLSALQDYKI
Trigger: AATTTTGTAATCCTGAAGTGCTGAAAGATGACTTCAGTTTCTCCAGTGATGGGATATGTCTGCCAGTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CCA 72 bp ACCCTTAAACGCTCTCCTGACTATGTTGAGTTTCTTTaGCATAAATACGGAGAACTTCTCATCCTTGTCAGT +
Preference number: 3 (lower is better)
Translates to: TLKRSPDYVEFL*HKYGELLILVS
Trigger: ACTGACAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAGAGCGTTTAAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CAA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTGAGAACTTCTCATCCTaGTCAGTGGTGTTGGAAATC +
Preference number: 3 (lower is better)
Translates to: NKQLDKPPVENTSEPELSENFSS*SVVLEI
Trigger: GATTTCCAACACCACTGACAAGGATGAGAAGTTCTC...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CAA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTGAATCCTCAGGGTGTTaGCATTTTTGGCTAGTTGAT +
Preference number: 3 (lower is better)
Translates to: NKQLDKPPVENTSEPELSESSGC*HFWLVD
Trigger: ATCAACTAGCCAAAAATGCAAACACCCTGAGGATTC...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR-3UTR CAA 90 bp GTCTATAAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCGCTCTCCTGACTATGTaGAGTTTCTTTGGCATAAAT +
Preference number: 3 (lower is better)
Translates to: VYKRTRHHHHQFRSTACVALLTM*SFFGIN
Trigger: ATTTATGCCAAAGAAACTCAACATAGTCAGGAGAGC...GACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTTATAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR TCA 72 bp TTTGAGATTTTTAGAAAGAGACTCCCAAATGGAGCTTaGCATCATGCTCTTCAATGTGCTTGGAGTTCCAAC +
Preference number: 3 (lower is better)
Translates to: FEIFRKRLPNGA*HHALQCAWSSN
Trigger: GTTGGAACTCCAAGCACATTGAAGAGCATGATGTCAAGCTCCATTTGGGAGTCTCTTTCTAAAAATCTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR GCA 72 bp AAGTATCAGCGGAGTTCTGGCATTGGATCCTTTATATaGATCTTTCAAATTAACTCCAGTTCTTTGAAGATA +
Preference number: 3 (lower is better)
Translates to: KYQRSSGIGSFI*IFQINSSSLKI
Trigger: TATCTTCAAAGAACTGGAGTTAATTTGAAAGATGCATATAAAGGATCCAATGCCAGAACTCCGCTGATACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTCTCTGCCATCTCCTCTaGTGGGGCAGGTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSLCHLL*WGRSLK
Trigger: CTTCAGAGACCTGCCCCATCAGAGGAGATGGCAGAG...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGAGGTGTGAGCCACCATaGCCGGCCGGGTTCCATATA +
Preference number: 4 (lower is better)
Translates to: PELSLDAAWASLLTQGRQRCEPP*PAGFHI
Trigger: TATATGGAACCCGGCCGGGCATGGTGGCTCACACCT...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CAA 72 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTaGACACAGGGGAGGCAGTGTGGAACAGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: PELSLDAAWASL*TQGRQCGTACA
Trigger: AGCACAGGCTGTTCCACACTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGACTCGGGTGGCTTCATaGACAAAGAGCAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PELSLDAAWASLLTQGRQTRVAS*TKSRAA
Trigger: GGCTGCTCTGCTCTTTGTTCATGAAGCCACCCGAGT...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGCCTCCACCTGGAATCTaGCAGCCACTGAAGATGTTG +
Preference number: 4 (lower is better)
Translates to: PELSLDAAWASLLTQGRQPPPGI*QPLKML
Trigger: CAACATCTTCAGTGGCTGTCAGATTCCAGGTGGAGG...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTCCTGGAGGTGCAAGCTaGACTCATATTAAGCACTTC +
Preference number: 4 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSPGGAS*THIKHF
Trigger: GAAGTGCTTAATATGAGTTCAGCTTGCACCTCCAGG...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGGTCTTCAGCTTTAGCTaGTTGGTCACGGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PELSLDAAWASLLTQGRQVFSFS*LVTAQR
Trigger: TCTCTGGGCCGTGACCAAGCAGCTAAAGCTGAAGAC...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTTCAGCTTTAGCTGCTTaGTCACGGCCCAGAGAAATT +
Preference number: 4 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSSALAA*SRPREI
Trigger: AATTTCTCTGGGCCGTGACCAAGCAGCTAAAGCTGA...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTTGGAATGTGACTACCTaGAGGTGCAAGCTGAACTCA +
Preference number: 4 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSWNVTT*RCKLNS
Trigger: TGAGTTCAGCTTGCACCTCCAGGTAGTCACATTCCA...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTCCCTTGTTGCTCTTATaGTGTGTTCTATGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSPLLLL*CVLWLP
Trigger: AGGAAGCCATAGAACACATCATAAGAGCAACAAGGG...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTCTTTGGCCCAAGTATTaGAGAAATTCAGTCGCTGGA +
Preference number: 4 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSLWPKY*RNSVAG
Trigger: TCCAGCGACTGAATTTCTTCAATACTTGGGCCAAAG...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp GTCAGTGGTGTTGGAAATCACATGGTGGGTGAAGGTGAGGGCATCCACAGCGATGCTCTCCTGCAGGTGTaGTGGAGGGATGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VSGVGNHMVGEGEGIHSDALLQV*WRDAQP
Trigger: AGGCTGGGCATCCCTCCAGCACACCTGCAGGAGAGC...ATCGCTGTGGATGCCCTCACCTTCACCCACCATGTGATTTCCAACACCACTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTGTTCTCAAGTTCCCTTaGAAGCAACCGATAGAAAAG +
Preference number: 4 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSVLKFP*KQPIEK
Trigger: CTTTTCTATCGGTTGCTTTCAAGGGAACTTGAGAAC...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGCCAATCAGTAACATGTaGCTCCCTGGTTGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: PELSLDAAWASLLTQGRQPISNM*LPGCRR
Trigger: TCTTCGACAACCAGGGAGTCACATGTTACTGATTGG...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTGTGTTTGAGAAGACGTaGGCTGATATCATTCACAAC +
Preference number: 4 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSVFEKT*ADIIHN
Trigger: GTTGTGAATGATATCAGCCCACGTCTTCTCAAACAC...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGGTACTTAGTCAGTGTTaGCTAGCAAGCATCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PELSLDAAWASLLTQGRQVLSQC*LASISA
Trigger: GGCACTGATGCTTGCTAGCCAACACTGACTAAGTAC...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGGGATTTGCACAGAAGTaGAAATGGTTCCAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: PELSLDAAWASLLTQGRQGFAQK*KWFQVS
Trigger: ACTCACCTGGAACCATTTTCACTTCTGTGCAAATCC...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp GTCAGTGGTGTTGGAAATCACATGGTGGGTGAAGGTGAGGGCATCCACAGCGATTCTCCCAGCAGCTCCTaGTGGCCTCTGGGTGTATTC +
Preference number: 4 (lower is better)
Translates to: VSGVGNHMVGEGEGIHSDSPSSS*WPLGVF
Trigger: GAATACACCCAGAGGCCATCAGGAGCTGCTGGGAGA...ATCGCTGTGGATGCCCTCACCTTCACCCACCATGTGATTTCCAACACCACTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp AATCACTTCTCCAATCAGGTAGCGCAGTGCTTGCCACGAAATGCTGGGCTGTCCGTGCTTGCCACGAAATaGTGGGCTGTCCTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: NHFSNQVAQCLPRNAGLSVLATK*WAVLSG
Trigger: CCCTGAGAGGACAGCCCAGCATTTCGTGGCAAGCAC...GGACAGCCCAGCATTTCGTGGCAAGCACTGCGCTACCTGATTGGAGAAGTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGGTGGATAGACCCATATaGAAGCGATCCCTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: PELSLDAAWASLLTQGRQVDRPI*KRSLFV
Trigger: AACAAAGAGGGATCGCTTCCATATGGGTCTATCCAC...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp GTCAGTGGTGTTGGAAATCACATGGTGGGTGAAGGTGAGGGCATCCACAGCGATGAACAGCCTGTGCTGTaGCTGGTGATGCCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: VSGVGNHMVGEGEGIHSDEQPVL*LVMPSV
Trigger: CACAGAAGGCATCACCAGGCACAGCACAGGCTGTTC...ATCGCTGTGGATGCCCTCACCTTCACCCACCATGTGATTTCCAACACCACTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp AATCACTTCTCCAATCAGGTAGCGCAGTGCTTGCCACGAAATGCTGGGCTGTCCATGATCTTGGCTCACTaGAACCTCCACCGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: NHFSNQVAQCLPRNAGLSMILAH*NLHRLG
Trigger: ACCCAGGCGGTGGAGGTTGCAGTGAGCCAAGATCAT...GGACAGCCCAGCATTTCGTGGCAAGCACTGCGCTACCTGATTGGAGAAGTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTGATATCATTCACAACTaGAACACAAGCTGCAACTAT +
Preference number: 4 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSDIIHN*NTSCNY
Trigger: ATAGTTGCAGCTTGTGTTCCAGTTGTGAATGATATC...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp AATCACTTCTCCAATCAGGTAGCGCAGTGCTTGCCACGAAATGCTGGGCTGTCCGGCACTGCCTCCACCTaGAATCTGACAGCCACTGAA +
Preference number: 4 (lower is better)
Translates to: NHFSNQVAQCLPRNAGLSGTAST*NLTATE
Trigger: TTCAGTGGCTGTCAGATTCCAGGTGGAGGCAGTGCC...GGACAGCCCAGCATTTCGTGGCAAGCACTGCGCTACCTGATTGGAGAAGTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTGTAAACAGCCCCTTTTaGAGTGATTTAACTCTTCAA +
Preference number: 4 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSVNSPF*SDLTLQ
Trigger: TTGAAGAGTTAAATCACTCCAAAAGGGGCTGTTTAC...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp CCTCCTAGATTCAAGTGTAGTGCTTCCATGAGAGTCAGCCAGCATCGGTCTGTGTTTTCCTGTACCAGCTaGACCGGCAGGACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PPRFKCSASMRVSQHRSVFSCTS*TGRTAS
Trigger: GGAGGCTGTCCTGCCGGTCCAGCTGGTACAGGAAAA...CACAGACCGATGCTGGCTGACTCTCATGGAAGCACTACACTTGAATCTAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495456.1
3UTR CAA 72 bp GAACAGCCTGTGCTGTGCCTGGTGATGCCTTCTGTGTaGTCCACTCTGGAATGTGACTACCTGGAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: EQPVLCLVMPSV*STLECDYLEVQ
Trigger: TTGCACCTCCAGGTAGTCACATTCCAGAGTGGACAACACAGAAGGCATCACCAGGCACAGCACAGGCTGTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGGTCAGGTATTCTTCCTaGACTGATGATGTAGTTCAA +
Preference number: 4 (lower is better)
Translates to: PELSLDAAWASLLTQGRQVRYSS*TDDVVQ
Trigger: TTGAACTACATCATCAGTTCAGGAAGAATACCTGAC...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp ACTCAGTGGCTTACAAGATCTGTAGGCGTGTTTCTGCCACAATGTAGGCACTCTGACTCCAGGTGTGCCTaGGGTAGGCCTGTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TQWLTRSVGVFLPQCRHSDSRCA*GRPVKP
Trigger: TGGCTTCACAGGCCTACCTCAGGCACACCTGGAGTC...AGAGTGCCTACATTGTGGCAGAAACACGCCTACAGATCTTGTAAGCCACTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGCAGAAGAATACACACTaGATTCATGACAGTCAGTAC +
Preference number: 4 (lower is better)
Translates to: PELSLDAAWASLLTQGRQQKNTH*IHDSQY
Trigger: GTACTGACTGTCATGAATGCAGTGTGTATTCTTCTG...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CAA 72 bp GGCATCCACAGCGATTCCTCGGGACCTCCCATAGTCTaGAAGCACAGCAGCAAGAAAGGCTTGTGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: GIHSDSSGPPIV*KHSSKKGLWKE
Trigger: TTCTTTCCACAAGCCTTTCTTGCTGCTGTGCTTCAAGACTATGGGAGGTCCCGAGGAATCGCTGTGGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGGTCCTTCAGGACTCATaGTCACAAAAATATGAAGAT +
Preference number: 4 (lower is better)
Translates to: PELSLDAAWASLLTQGRQVLQDS*SQKYED
Trigger: ATCTTCATATTTTTGTGATCATGAGTCCTGAAGGAC...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTGATGGGGCAGGTCTCTaGAGAGAAGGGGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSDGAGL*REGVGT
Trigger: GGTGCCCACCCCTTCTCTTCAGAGACCTGCCCCATC...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp AGATTCAAGTGTAGTGCTTCCATGAGAGTCAGCCAGCATCGGTCTGTGAGAGGCAGTGTAGTGCTTCCATaGGAGTCAGCCAGCATCGGT +
Preference number: 4 (lower is better)
Translates to: RFKCSASMRVSQHRSVRGSVVLP*ESASIG
Trigger: ACCGATGCTGGCTGACTCTCATGGAAGCACTACACT...GCCTCTCACAGACCGATGCTGGCTGACTCTCATGGAAGCACTACACTTGAATCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495456.1
CDS-3UTR GCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGTCGAAGAACCCTTGTTaGTCTTATGATGTGTTCTAT +
Preference number: 4 (lower is better)
Translates to: PELSLDAAWASLLTQGRQSKNPC*SYDVFY
Trigger: ATAGAACACATCATAAGAGCAACAAGGGTTCTTCGA...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp TCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAGGCGCCTGTGAAGCCACATaGTCTCCTGCAGGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SLDEIINPGTQWLTRSVGACEAT*SPAGVL
Trigger: CAGCACACCTGCAGGAGAGCATGTGGCTTCACAGGC...GCCTACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGTGTCATCATCTAATATaGATCCTAGTGCTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PELSLDAAWASLLTQGRQCHHLI*ILVLSA
Trigger: TGCAGAAAGCACTAGGATCCATATTAGATGATGACA...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTCCAGCCTGGAGGAGCTaGTGGCCAAGTACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSPAWRS*WPSTRP
Trigger: TGGCCTGGTACTTGGCCACCAGCTCCTCCAGGCTGG...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTCTCCTGCAGGTGTGCTaGAGGGATGCCCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSLLQVC*RDAQPG
Trigger: TCCAGGCTGGGCATCCCTCCAGCACACCTGCAGGAG...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp CTCTTGTGCAAATCTCAGGAGGATATTGGTAAGGTCGATCCCATGAGTTTGAATCCTGGGCCAGCTTGTTaGCACAGGGGAGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LLCKSQEDIGKVDPMSLNPGPAC*HRGGSV
Trigger: CACACTGCCTCCCCTGTGTCAACAAGCTGGCCCAGG...ATTCAAACTCATGGGATCGACCTTACCAATATCCTCCTGAGATTTGCACAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp TTTCCTGTACCAGCTGGACCGGCAGGACAGCCTCCTAGATTCAAGTGTAGTGCTTACACGAATTTTCTTTaGCAGCACGAGACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: FPVPAGPAGQPPRFKCSAYTNFL*QHETFP
Trigger: GGGGAAGGTCTCGTGCTGCCAAAGAAAATTCGTGTA...AGCACTACACTTGAATCTAGGAGGCTGTCCTGCCGGTCCAGCTGGTACAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495456.1
CDS-3UTR CCA 90 bp AATCACTTCTCCAATCAGGTAGCGCAGTGCTTGCCACGAAATGCTGGGCTGTCCACTGAAAGCGCCTGCTaGCCATTGTTTTCCGATTTG +
Preference number: 4 (lower is better)
Translates to: NHFSNQVAQCLPRNAGLSTESAC*PLFSDL
Trigger: CAAATCGGAAAACAATGGCCAGCAGGCGCTTTCAGT...GGACAGCCCAGCATTTCGTGGCAAGCACTGCGCTACCTGATTGGAGAAGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GTCAGTGGTGTTGGAAATCACATGGTGGGTGAAGGTGAGGGCATCCACAGCGATAATTGCTGTCTTCAATaGAGAGCTTCTGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VSGVGNHMVGEGEGIHSDNCCLQ*RASAAW
Trigger: CCAGGCTGCAGAAGCTCTCCATTGAAGACAGCAATT...ATCGCTGTGGATGCCCTCACCTTCACCCACCATGTGATTTCCAACACCACTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp CTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACAAATGTCCGACGGCCGTTGTaGCCCTTCCTGGAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: LNLEDRVYLGTELPDITNVRRPL*PFLEAA
Trigger: CGCCGCTTCCAGGAAGGGCCACAACGGCCGTCGGAC...ATTTGTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
3UTR CAA 72 bp ACCGTAAATCACTTCTCCAATCAGGTAGCGCAGTGCTaGCCACGAAATGCTGGGCTGTCCTCTCAGGGAATT +
Preference number: 4 (lower is better)
Translates to: TVNHFSNQVAQC*PRNAGLSSQGI
Trigger: AATTCCCTGAGAGGACAGCCCAGCATTTCGTGGCAAGCACTGCGCTACCTGATTGGAGAAGTGATTTACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp AGATTCAAGTGTAGTGCTTCCATGAGAGTCAGCCAGCATCGGTCTGTGAGAGGCACCACTTGTCCTGGATaGGATAACACCCATTGGGAA +
Preference number: 4 (lower is better)
Translates to: RFKCSASMRVSQHRSVRGTTCPG*DNTHWE
Trigger: TTCCCAATGGGTGTTATCTCATCCAGGACAAGTGGT...GCCTCTCACAGACCGATGCTGGCTGACTCTCATGGAAGCACTACACTTGAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495456.1
CDS-3UTR GCA 90 bp ACTCAGTGGCTTACAAGATCTGTAGGCGTGTTTCTGCCACAATGTAGGCACTCTAATCAGGTAGCGCAGTaGTTGCCACGAAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: TQWLTRSVGVFLPQCRHSNQVAQ*LPRNAG
Trigger: CCCAGCATTTCGTGGCAAGCACTGCGCTACCTGATT...AGAGTGCCTACATTGTGGCAGAAACACGCCTACAGATCTTGTAAGCCACTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp GTCAGTGGTGTTGGAAATCACATGGTGGGTGAAGGTGAGGGCATCCACAGCGATTGGAGCTTGACATCATaGTCTTCAATGTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: VSGVGNHMVGEGEGIHSDWSLTS*SSMCLE
Trigger: CTCCAAGCACATTGAAGAGCATGATGTCAAGCTCCA...ATCGCTGTGGATGCCCTCACCTTCACCCACCATGTGATTTCCAACACCACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp AAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCTTCCCCAGCCACATGCTCTCCTaGAGGTGTGCTGGAGGGATG +
Preference number: 4 (lower is better)
Translates to: KRTRHHHHQFRSTACVFPSHMLS*RCAGGM
Trigger: CATCCCTCCAGCACACCTGCAGGAGAGCATGTGGCT...GGGGAAGACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GTCAGTGGTGTTGGAAATCACATGGTGGGTGAAGGTGAGGGCATCCACAGCGATCGTGAAATACTCGGGTaGCTTCATGAACAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: VSGVGNHMVGEGEGIHSDREILG*LHEQRA
Trigger: TGCTCTTTGTTCATGAAGCCACCCGAGTATTTCACG...ATCGCTGTGGATGCCCTCACCTTCACCCACCATGTGATTTCCAACACCACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GTCAGTGGTGTTGGAAATCACATGGTGGGTGAAGGTGAGGGCATCCACAGCGATTTGCTTCCAGGATTGTaGATAGACCCATATGGAAGC +
Preference number: 4 (lower is better)
Translates to: VSGVGNHMVGEGEGIHSDLLPGL*IDPYGS
Trigger: GCTTCCATATGGGTCTATCCACAATCCTGGAAGCAA...ATCGCTGTGGATGCCCTCACCTTCACCCACCATGTGATTTCCAACACCACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp ACTCAGTGGCTTACAAGATCTGTAGGCGTGTTTCTGCCACAATGTAGGCACTCTATAAACTTTTCGCCCTaGGTCTCCCAGCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TQWLTRSVGVFLPQCRHSINFSP*VSQQLL
Trigger: CAGGAGCTGCTGGGAGACCCAGGGCGAAAAGTTTAT...AGAGTGCCTACATTGTGGCAGAAACACGCCTACAGATCTTGTAAGCCACTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp AAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCTTCCCCCATGTGTCTTCCCCTTaGAGGTCCCCCTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: KRTRHHHHQFRSTACVFPHVSSP*RSPWLE
Trigger: CTCCAACCAGGGGGACCTCCAAGGGGAAGACACATG...GGGGAAGACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp CTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACAAATCGTTGTGGCCCTTCCTaGAAGCGGCGAAGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: LNLEDRVYLGTELPDITNRCGPS*KRRRSG
Trigger: GCCGGACCTTCGCCGCTTCCAGGAAGGGCCACAACG...ATTTGTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR GCA 90 bp ACTCAGTGGCTTACAAGATCTGTAGGCGTGTTTCTGCCACAATGTAGGCACTCTCACACTGAAAGCGCCTaGTGGCCATTGTTTTCCGAT +
Preference number: 4 (lower is better)
Translates to: TQWLTRSVGVFLPQCRHSHTESA*WPLFSD
Trigger: ATCGGAAAACAATGGCCAGCAGGCGCTTTCAGTGTG...AGAGTGCCTACATTGTGGCAGAAACACGCCTACAGATCTTGTAAGCCACTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp AATCACTTCTCCAATCAGGTAGCGCAGTGCTTGCCACGAAATGCTGGGCTGTCCTCATGCTCTTCAATGTaGTTGGAGTTCCAACAGCAA +
Preference number: 4 (lower is better)
Translates to: NHFSNQVAQCLPRNAGLSSCSSM*LEFQQQ
Trigger: TTGCTGTTGGAACTCCAAGCACATTGAAGAGCATGA...GGACAGCCCAGCATTTCGTGGCAAGCACTGCGCTACCTGATTGGAGAAGTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp AATCACTTCTCCAATCAGGTAGCGCAGTGCTTGCCACGAAATGCTGGGCTGTCCGCTAGCAAGCATCAGTaGCATCATTATCAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: NHFSNQVAQCLPRNAGLSASKHQ*HHYQVD
Trigger: ATCTACCTGATAATGATGGCACTGATGCTTGCTAGC...GGACAGCCCAGCATTTCGTGGCAAGCACTGCGCTACCTGATTGGAGAAGTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp ACTCAGTGGCTTACAAGATCTGTAGGCGTGTTTCTGCCACAATGTAGGCACTCTAGCAGTGGCCACTGCTaGCCATTCTTGATCAAGATG +
Preference number: 4 (lower is better)
Translates to: TQWLTRSVGVFLPQCRHSSSGHC*PFLIKM
Trigger: CATCTTGATCAAGAATGGCCAGCAGTGGCCACTGCT...AGAGTGCCTACATTGTGGCAGAAACACGCCTACAGATCTTGTAAGCCACTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTTCCCTTGATGCAGCCTaGGCCAGCTTGTTGACACAG +
Preference number: 4 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSSLDAA*ASLLTQ
Trigger: CTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGA...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GTCTATAAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCAGTACCAGGCCACCCTaGAGGGCTCTGCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: VYKRTRHHHHQFRSTACVSTRPP*RALPSP
Trigger: AGGAGATGGCAGAGCCCTCCAGGGTGGCCTGGTACT...GACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTTATAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GAATTGACTCAAATTCCAATTGGACTTTGTAGCTCCTTCCAGAATTCTCACATACGTTGTGGCCCTTCCTaGAAGCGGCGAAGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: ELTQIPIGLCSSFQNSHIRCGPS*KRRRSG
Trigger: GCCGGACCTTCGCCGCTTCCAGGAAGGGCCACAACG...TATGTGAGAATTCTGGAAGGAGCTACAAAGTCCAATTGGAATTTGAGTCAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366849.5
CDS-3UTR TCA 90 bp GTCAGTGGTGTTGGAAATCACATGGTGGGTGAAGGTGAGGGCATCCACAGCGATCAGGAATCAAGATGGTaGTATTCTGTTTTAGGCTAC +
Preference number: 4 (lower is better)
Translates to: VSGVGNHMVGEGEGIHSDQESRW*YSVLGY
Trigger: GTAGCCTAAAACAGAATATCACCATCTTGATTCCTG...ATCGCTGTGGATGCCCTCACCTTCACCCACCATGTGATTTCCAACACCACTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTCCTGTGCTCCCTCTGTaGGTCATAAGAAAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSPVLPL*VIRKGP
Trigger: AGGGCCTTTTCTTATGACTCACAGAGGGAGCACAGG...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTCCTGAGGTAGGCCTGTaGAGCCACATGCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NKQLDKPPVENTSEPELSPEVGL*SHMLSC
Trigger: GCAGGAGAGCATGTGGCTTCACAGGCCTACCTCAGG...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTGTCTCAAGGAGATTCTaGAGGAGGACACTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSVSRRF*RRTLPP
Trigger: AGGAGGGAGTGTCCTCCTGCAGAATCTCCTTGAGAC...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTAGAGCTTCTGCAGCCTaGATCCTTCCATCTGACGGA +
Preference number: 4 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSRASAA*ILPSDG
Trigger: TCCGTCAGATGGAAGGATCCAGGCTGCAGAAGCTCT...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp CAGTCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTACGCCTCGGGTCGCAATaGGGAGATAGTTTTTACGTA +
Preference number: 4 (lower is better)
Translates to: QSLDEIINPGTQWLTRSVRLGSQ*GDSFYV
Trigger: TACGTAAAAACTATCTCCCCATTGCGACCCGAGGCG...TACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTCTTGCCACGAAATGCTaGGCTGTCCTCTCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSLATKC*AVLSGN
Trigger: ATTCCCTGAGAGGACAGCCCAGCATTTCGTGGCAAG...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTCACCAGATTCTCCTGTaGGAAGTACAGGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSHQILL*EVQGRN
Trigger: ATTCCTGCCCTGTACTTCTCACAGGAGAATCTGGTG...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp AATCACTTCTCCAATCAGGTAGCGCAGTGCTTGCCACGAAATGCTGGGCTGTCCAGCTTTTCAAGCATTTaGTTAATGGCAGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: NHFSNQVAQCLPRNAGLSSFSSI*LMAAVF
Trigger: GAAAACTGCTGCCATTAATCAAATGCTTGAAAAGCT...GGACAGCCCAGCATTTCGTGGCAAGCACTGCGCTACCTGATTGGAGAAGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp GTCTATAAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCAAGACTGACGCACACTaGAAGCGCCTGCTGGCCATT +
Preference number: 4 (lower is better)
Translates to: VYKRTRHHHHQFRSTACVKTDAH*KRLLAI
Trigger: AATGGCCAGCAGGCGCTTTCAGTGTGCGTCAGTCTT...GACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTTATAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp GTCTATAAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCGTCCACTCTGGAATGTaGCTACCTGGAGGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: VYKRTRHHHHQFRSTACVVHSGM*LPGGAS
Trigger: GCTTGCACCTCCAGGTAGTCACATTCCAGAGTGGAC...GACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTTATAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp GTCTATAAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCCTGTGCTGTGCCTGGTaGTGCCTTCTGTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: VYKRTRHHHHQFRSTACVLCCAW*CLLCCP
Trigger: TGGACAACACAGAAGGCATCACCAGGCACAGCACAG...GACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTTATAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp TTTCCTGTACCAGCTGGACCGGCAGGACAGCCTCCTAGATTCAAGTGTAGTGCTATTTTGCTAGATCTTTaGCAGTCTCAGTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: FPVPAGPAGQPPRFKCSAILLDL*QSQFFL
Trigger: CAGGAAAAACTGAGACTGTCAAAGATCTAGCAAAAT...AGCACTACACTTGAATCTAGGAGGCTGTCCTGCCGGTCCAGCTGGTACAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495456.1
CDS-3UTR TCA 90 bp CCTCCTAGATTCAAGTGTAGTGCTTCCATGAGAGTCAGCCAGCATCGGTCTGTGAATCCTCAAAACAGTTaGAGACCACACAATGTTTGC +
Preference number: 4 (lower is better)
Translates to: PPRFKCSASMRVSQHRSVNPQNS*RPHNVC
Trigger: GCAAACATTGTGTGGTCTTCAACTGTTTTGAGGATT...CACAGACCGATGCTGGCTGACTCTCATGGAAGCACTACACTTGAATCTAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495456.1
CDS-3UTR GCA 90 bp ACTCAGTGGCTTACAAGATCTGTAGGCGTGTTTCTGCCACAATGTAGGCACTCTCATCTCTTCCTCTCGTaGCCTCAAAATGTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: TQWLTRSVGVFLPQCRHSHLFLS*PQNVCK
Trigger: TTTGCACACATTTTGAGGGCACGAGAGGAAGAGATG...AGAGTGCCTACATTGTGGCAGAAACACGCCTACAGATCTTGTAAGCCACTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp AAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCTTCCCCCTGACATATTGGCACTaGCTCCACCTGGAATCTGAC +
Preference number: 4 (lower is better)
Translates to: KRTRHHHHQFRSTACVFPLTYWH*LHLESD
Trigger: GTCAGATTCCAGGTGGAGGCAGTGCCAATATGTCAG...GGGGAAGACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp CTCTTGTGCAAATCTCAGGAGGATATTGGTAAGGTCGATCCCATGAGTTTGAATTGGGTCAATCAGCAGTaGCCACTGCTGGCCATTCTT +
Preference number: 4 (lower is better)
Translates to: LLCKSQEDIGKVDPMSLNWVNQQ*PLLAIL
Trigger: AAGAATGGCCAGCAGTGGCCACTGCTGATTGACCCA...ATTCAAACTCATGGGATCGACCTTACCAATATCCTCCTGAGATTTGCACAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTTTGGAAATCACATGGTaGGTGAAGGTGAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSLEITW*VKVRAS
Trigger: GGATGCCCTCACCTTCACCCACCATGTGATTTCCAA...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp TCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAGGCAAGAAGTATCCCCAGTaGACCAGAAACTGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: SLDEIINPGTQWLTRSVGKKYPQ*TRNCEN
Trigger: GTTCTCACAGTTTCTGGTCCACTGGGGATACTTCTT...GCCTACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp AAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCTTCCCCCTGTGTTGTCCACTCTaGAATGTGACTACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KRTRHHHHQFRSTACVFPLCCPL*NVTTWR
Trigger: CCTCCAGGTAGTCACATTCCAGAGTGGACAACACAG...GGGGAAGACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CAA 72 bp ATAAATACGGAGAACTTCTCATCCTTGTCAGTGGTGTaGGAAATCACATGGTGGGTGAAGGTGAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: INTENFSSLSVV*EITWWVKVRAS
Trigger: GGATGCCCTCACCTTCACCCACCATGTGATTTCCAACACCACTGACAAGGATGAGAAGTTCTCCGTATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTCAGTCTGATGAGTGCTaGGGAGAGGAAGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: NKQLDKPPVENTSEPELSQSDEC*GEEDQD
Trigger: GTCCTGGTCTTCCTCTCCTCAGCACTCATCAGACTG...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp CTCTTGTGCAAATCTCAGGAGGATATTGGTAAGGTCGATCCCATGAGTTTGAATCGATCCCTCTTTGTTTaGATCTCTTCCTCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: LLCKSQEDIGKVDPMSLNRSLFV*ISSSRA
Trigger: GGCACGAGAGGAAGAGATGCAAACAAAGAGGGATCG...ATTCAAACTCATGGGATCGACCTTACCAATATCCTCCTGAGATTTGCACAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp TCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAGGCGTATGTAGTCCTTTATaGTTGCAGATCCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: SLDEIINPGTQWLTRSVGVCSPL*LQILEL
Trigger: CAGTTCCAGGATCTGCAAGCATAAAGGACTACATAC...GCCTACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTAAGGAGAGCTTCTTCTaGCCACCTCTCATACCAATC +
Preference number: 4 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSKESFF*PPLIPI
Trigger: GATTGGTATGAGAGGTGGCCAGAAGAAGCTCTCCTT...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp ACTCAGTGGCTTACAAGATCTGTAGGCGTGTTTCTGCCACAATGTAGGCACTCTGCGGAGTTCTGGCATTaGATCCTTTATATGCATCTT +
Preference number: 4 (lower is better)
Translates to: TQWLTRSVGVFLPQCRHSAEFWH*ILYMHL
Trigger: AAGATGCATATAAAGGATCCAATGCCAGAACTCCGC...AGAGTGCCTACATTGTGGCAGAAACACGCCTACAGATCTTGTAAGCCACTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp ACTCAGTGGCTTACAAGATCTGTAGGCGTGTTTCTGCCACAATGTAGGCACTCTGGCCCAGAGAAATTATaGTCACATGATGTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: TQWLTRSVGVFLPQCRHSGPEKL*SHDVLF
Trigger: GAACAACACATCATGTGACCATAATTTCTCTGGGCC...AGAGTGCCTACATTGTGGCAGAAACACGCCTACAGATCTTGTAAGCCACTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp CAGTCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAAATCCAGGAACTCAGTaGCTTACAAGATCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: QSLDEIINPGTQWLTRSVNPGTQ*LTRSVG
Trigger: GCCTACAGATCTTGTAAGCCACTGAGTTCCTGGATT...TACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp CGTTTAATTTCTTGCTTCAAAAAGGTTAGCAAGACACAATGGATAAGGGGGTCGCATAAGAAAAGGCCCTaGTGCACATCTGCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: RLISCFKKVSKTQWIRGSHKKRP*CTSASR
Trigger: CCGAGAGGCAGATGTGCACCAGGGCCTTTTCTTATG...CGACCCCCTTATCCATTGTGTCTTGCTAACCTTTTTGAAGCAAGAAATTAAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327794.10
3UTR CAA 72 bp CATCATCAATTTAGATCAACTGCATGTGTCTTCCCCTaGGAGGTCCCCCTGGTTGGAGTTCTAGCAGAATTA +
Preference number: 4 (lower is better)
Translates to: HHQFRSTACVFP*EVPLVGVLAEL
Trigger: TAATTCTGCTAGAACTCCAACCAGGGGGACCTCCAAGGGGAAGACACATGCAGTTGATCTAAATTGATGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp CTCTTGTGCAAATCTCAGGAGGATATTGGTAAGGTCGATCCCATGAGTTTGAATCACCAGTTGGTAGGTTaGTGCCTACTTGTGAACTGT +
Preference number: 4 (lower is better)
Translates to: LLCKSQEDIGKVDPMSLNHQLVG*CLLVNC
Trigger: ACAGTTCACAAGTAGGCATCAACCTACCAACTGGTG...ATTCAAACTCATGGGATCGACCTTACCAATATCCTCCTGAGATTTGCACAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp ACTCAGTGGCTTACAAGATCTGTAGGCGTGTTTCTGCCACAATGTAGGCACTCTTTTAGTGGGATTATCTaGACTTCCAGTTGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: TQWLTRSVGVFLPQCRHSFSGII*TSSCCL
Trigger: AAGACAGCAACTGGAAGTTCAGATAATCCCACTAAA...AGAGTGCCTACATTGTGGCAGAAACACGCCTACAGATCTTGTAAGCCACTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTGTTCCATCCTTCTTCTaGCATGTTCCTAACGTTCAC +
Preference number: 4 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSVPSFF*HVPNVH
Trigger: GTGAACGTTAGGAACATGTCAGAAGAAGGATGGAAC...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp CTCCTGACTATGTTGAGTTTCTTTGGCATAAATACGGAGAACTTCTCATCCTTGACAGTCCTGTCAGCTTaGAGCAATCCTAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LLTMLSFFGINTENFSSLTVLSA*SNPRRS
Trigger: GCTTCTCCTAGGATTGCTGCAAGCTGACAGGACTGT...CAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp CGTTTAATTTCTTGCTTCAAAAAGGTTAGCAAGACACAATGGATAAGGGGGTCGTCAATGGAGAGCTTCTaGAGCCTGGATCCTTCCATC +
Preference number: 4 (lower is better)
Translates to: RLISCFKKVSKTQWIRGSSMESF*SLDPSI
Trigger: GATGGAAGGATCCAGGCTGCAGAAGCTCTCCATTGA...CGACCCCCTTATCCATTGTGTCTTGCTAACCTTTTTGAAGCAAGAAATTAAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp TCTCGATATTTCCAACAGCCAGAGCAGTTTTGGACCCATATTTTAAATAAACAGGCCCTGGTGCACATCTaGCTCTCGGTAGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SRYFQQPEQFWTHILNKQALVHI*LSVAFS
Trigger: TGAAAAGGCTACCGAGAGGCAGATGTGCACCAGGGC...CTGTTTATTTAAAATATGGGTCCAAAACTGCTCTGGCTGTTGGAAATATCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp AGTGCTTCCATGAGAGTCAGCCAGCATCGGTCTGTGAGAGGCGTAATAACCAATAGACCACACAATGTTTaGCTAAGGATTTTGCTAGAT +
Preference number: 4 (lower is better)
Translates to: SASMRVSQHRSVRGVITNRPHNV*LRILLD
Trigger: ATCTAGCAAAATCCTTAGGCAAACATTGTGTGGTCT...ATTGGTTATTACGCCTCTCACAGACCGATGCTGGCTGACTCTCATGGAAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495456.1
CDS-3UTR CCA 90 bp CTCTTGTGCAAATCTCAGGAGGATATTGGTAAGGTCGATCCCATGAGTTTGAATAAAGCTATAACCCACTaGCACAGGGAGCAACAAGCA +
Preference number: 4 (lower is better)
Translates to: LLCKSQEDIGKVDPMSLNKAITH*HREQQA
Trigger: TGCTTGTTGCTCCCTGTGCCAGTGGGTTATAGCTTT...ATTCAAACTCATGGGATCGACCTTACCAATATCCTCCTGAGATTTGCACAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp TCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAGGCAAGAAATTCAGTCGCTaGATGAGATCATCAATCCAG +
Preference number: 4 (lower is better)
Translates to: SLDEIINPGTQWLTRSVGKKFSR*MRSSIQ
Trigger: CTGGATTGATGATCTCATCCAGCGACTGAATTTCTT...GCCTACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GTCTATAAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCGGAGGTCCCCCTGGTTaGAGTTCTAGCAGAATTAGA +
Preference number: 4 (lower is better)
Translates to: VYKRTRHHHHQFRSTACVGGPPG*SSSRIR
Trigger: TCTAATTCTGCTAGAACTCCAACCAGGGGGACCTCC...GACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTTATAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTCCAGTTGCTGTCTTATaGGTTTCAGGAATCAAGATG +
Preference number: 4 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSPVAVL*VSGIKM
Trigger: CATCTTGATTCCTGAAACTCATAAGACAGCAACTGG...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp TCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAGGCAAGAACACCATGGAATaGGAAAGCTCCAAAGAAATT +
Preference number: 4 (lower is better)
Translates to: SLDEIINPGTQWLTRSVGKNTME*ESSKEI
Trigger: AATTTCTTTGGAGCTTTCTCATTCCATGGTGTTCTT...GCCTACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp ACTCAGTGGCTTACAAGATCTGTAGGCGTGTTTCTGCCACAATGTAGGCACTCTTGCCTATTATCCATATaGCCAGATTGTTCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: TQWLTRSVGVFLPQCRHSCLLSI*PDCSVR
Trigger: TCTTACTGAACAATCTGGTCATATGGATAATAGGCA...AGAGTGCCTACATTGTGGCAGAAACACGCCTACAGATCTTGTAAGCCACTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp GTCTATAAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCGAAAATGGTTCCAGGTaGGTGCTGACATATTGGCAC +
Preference number: 4 (lower is better)
Translates to: VYKRTRHHHHQFRSTACVENGSR*VLTYWH
Trigger: GTGCCAATATGTCAGCACTCACCTGGAACCATTTTC...GACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTTATAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp CTCTTGTGCAAATCTCAGGAGGATATTGGTAAGGTCGATCCCATGAGTTTGAATCTCCCAAATGGAGCTTaGCATCATGCTCTTCAATGT +
Preference number: 4 (lower is better)
Translates to: LLCKSQEDIGKVDPMSLNLPNGA*HHALQC
Trigger: ACATTGAAGAGCATGATGTCAAGCTCCATTTGGGAG...ATTCAAACTCATGGGATCGACCTTACCAATATCCTCCTGAGATTTGCACAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp AAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCTTCCCCACTGCTTCCAAACTGTaGCAAATCTCATATACCGAC +
Preference number: 4 (lower is better)
Translates to: KRTRHHHHQFRSTACVFPTASKL*QISYTD
Trigger: GTCGGTATATGAGATTTGTCACAGTTTGGAAGCAGT...GGGGAAGACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTGCATTTTTGGCTAGTTaGTGGAATAGACTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSAFLAS*WNRLLP
Trigger: TGGAAGCAGTCTATTCCATCAACTAGCCAAAAATGC...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp CTCTTGTGCAAATCTCAGGAGGATATTGGTAAGGTCGATCCCATGAGTTTGAATTGGGAGCCAGTATCTTaGAGGAAACCCTTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: LLCKSQEDIGKVDPMSLNWEPVS*RKPFKE
Trigger: TTCTTTGAAGGGTTTCCTTCAAGATACTGGCTCCCA...ATTCAAACTCATGGGATCGACCTTACCAATATCCTCCTGAGATTTGCACAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp CTCTTGTGCAAATCTCAGGAGGATATTGGTAAGGTCGATCCCATGAGTTTGAATATACCGACGCTGTATTaGAGTATAAGCCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: LLCKSQEDIGKVDPMSLNIPTLY*SISHFG
Trigger: GCCAAAGTGGCTTATACTGCAATACAGCGTCGGTAT...ATTCAAACTCATGGGATCGACCTTACCAATATCCTCCTGAGATTTGCACAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp CTCTTGTGCAAATCTCAGGAGGATATTGGTAAGGTCGATCCCATGAGTTTGAATCTCCTCAGAGTCTTTTaGCTTGTAGGACAAACTCTC +
Preference number: 4 (lower is better)
Translates to: LLCKSQEDIGKVDPMSLNLLRVF*LVGQTL
Trigger: GAGAGTTTGTCCTACAAGGCAAAAGACTCTGAGGAG...ATTCAAACTCATGGGATCGACCTTACCAATATCCTCCTGAGATTTGCACAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTTACACTCTACAATTTTaGCGGAAGCTAGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSYTLQF*RKLGPS
Trigger: TGAAGGACCTAGCTTCCGCCAAAATTGTAGAGTGTA...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp TCTCGATATTTCCAACAGCCAGAGCAGTTTTGGACCCATATTTTAAATAAACAGGTGAGCTTGCCTATGTaGGTCAATCAGCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SRYFQQPEQFWTHILNKQVSLPM*VNQQWP
Trigger: TGGCCACTGCTGATTGACCCACATAGGCAAGCTCAC...CTGTTTATTTAAAATATGGGTCCAAAACTGCTCTGGCTGTTGGAAATATCGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp CGTTTAATTTCTTGCTTCAAAAAGGTTAGCAAGACACAATGGATAAGGGGGTCGTATGCTTGCAGATCCTaGAACTGGCAGACATATCCC +
Preference number: 4 (lower is better)
Translates to: RLISCFKKVSKTQWIRGSYACRS*NWQTYP
Trigger: GGGATATGTCTGCCAGTTCCAGGATCTGCAAGCATA...CGACCCCCTTATCCATTGTGTCTTGCTAACCTTTTTGAAGCAAGAAATTAAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp AAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCTTCCCCGCTCTTCAATGTGCTTaGAGTTCCAACAGCAATTTC +
Preference number: 4 (lower is better)
Translates to: KRTRHHHHQFRSTACVFPALQCA*SSNSNF
Trigger: GAAATTGCTGTTGGAACTCCAAGCACATTGAAGAGC...GGGGAAGACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp CAGTCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTATTAAAAGAAGGCTCATaGGAAAAGAAAGGCATGTTG +
Preference number: 4 (lower is better)
Translates to: QSLDEIINPGTQWLTRSVLKEGS*EKKGML
Trigger: CAACATGCCTTTCTTTTCTCATGAGCCTTCTTTTAA...TACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp CTCTTGTGCAAATCTCAGGAGGATATTGGTAAGGTCGATCCCATGAGTTTGAATATGTCTTGTGAAGGATaGGGTAATACCAGCATGGAA +
Preference number: 4 (lower is better)
Translates to: LLCKSQEDIGKVDPMSLNMSCEG*GNTSME
Trigger: TTCCATGCTGGTATTACCTCATCCTTCACAAGACAT...ATTCAAACTCATGGGATCGACCTTACCAATATCCTCCTGAGATTTGCACAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp CAGTCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAAAGCTCCAAAGAAATTaGACCCAACTTCATTTGGAA +
Preference number: 4 (lower is better)
Translates to: QSLDEIINPGTQWLTRSVKLQRN*TQLHLE
Trigger: TTCCAAATGAAGTTGGGTTCAATTTCTTTGGAGCTT...TACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp CGTTTAATTTCTTGCTTCAAAAAGGTTAGCAAGACACAATGGATAAGGGGGTCGTACACACTGCATTCATaGCAGTCAGTACAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: RLISCFKKVSKTQWIRGSYTLHS*QSVQGR
Trigger: CCTTCCTTGTACTGACTGTCATGAATGCAGTGTGTA...CGACCCCCTTATCCATTGTGTCTTGCTAACCTTTTTGAAGCAAGAAATTAAACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTGATGGCATTCTCTACTaGATACTGACCATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NKQLDKPPVENTSEPELSDGILY*ILTMRQ
Trigger: CTGCCTCATGGTCAGTATTCAGTAGAGAATGCCATC...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp CTCTTGTGCAAATCTCAGGAGGATATTGGTAAGGTCGATCCCATGAGTTTGAATAAGCCTTGGCATAAATaGTGTTGCAAGATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: LLCKSQEDIGKVDPMSLNKPWHK*CCKMAV
Trigger: AACTGCCATCTTGCAACATCATTTATGCCAAGGCTT...ATTCAAACTCATGGGATCGACCTTACCAATATCCTCCTGAGATTTGCACAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp CTCCTGACTATGTTGAGTTTCTTTGGCATAAATACGGAGAACTTCTCATCCTTGAATTCAGTCGCTGGATaGGATCATCAATCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LLTMLSFFGINTENFSSLNSVAG*DHQSRN
Trigger: GTTCCTGGATTGATGATCTCATCCAGCGACTGAATT...CAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp CAGTCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTATGTTCAAGTCTTTCATaGTTTTGTGGATTTGGACAC +
Preference number: 4 (lower is better)
Translates to: QSLDEIINPGTQWLTRSVCSSLS*FCGFGH
Trigger: GTGTCCAAATCCACAAAAGCATGAAAGACTTGAACA...TACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp GTCTATAAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCAGTTCATCCTTACTCTaGTCAGGTCTGATCATGAGG +
Preference number: 4 (lower is better)
Translates to: VYKRTRHHHHQFRSTACVSSSLL*SGLIMR
Trigger: CCTCATGATCAGACCTGAGCAGAGTAAGGATGAACT...GACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTTATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp CAGTCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAGTTGATGGAATAGACTaGTTCCAAACTGTGACAAAT +
Preference number: 4 (lower is better)
Translates to: QSLDEIINPGTQWLTRSVVDGID*FQTVTN
Trigger: ATTTGTCACAGTTTGGAAGCAGTCTATTCCATCAAC...TACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp AACTCTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACAATGCCTGGGTAGCTTaGTGTAACTGCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: NSEPGRQSILRHRIARYNNAWVA*CNCSSQ
Trigger: TTGTGAAGAGCAGTTACAGCAAGCTACCCAGGCATT...GTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR CCA 90 bp CTCTTGTGCAAATCTCAGGAGGATATTGGTAAGGTCGATCCCATGAGTTTGAATATGCTTTTGTGGATTTaGACACATGTTGGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: LLCKSQEDIGKVDPMSLNMLLWI*THVGAS
Trigger: ACTTGCCCCAACATGTGTCCAAATCCACAAAAGCAT...ATTCAAACTCATGGGATCGACCTTACCAATATCCTCCTGAGATTTGCACAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp CAGTCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAGTTCTTCAAGAGTTATaGCATCAAGGGAAATACTCT +
Preference number: 4 (lower is better)
Translates to: QSLDEIINPGTQWLTRSVVLQEL*HQGKYS
Trigger: AGAGTATTTCCCTTGATGCCATAACTCTTGAAGAAC...TACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp CGTTTAATTTCTTGCTTCAAAAAGGTTAGCAAGACACAATGGATAAGGGGGTCGTTACTTTTCAATCCCTaGGGAGATTCCACGGCAATC +
Preference number: 4 (lower is better)
Translates to: RLISCFKKVSKTQWIRGSLLFNP*GDSTAI
Trigger: GATTGCCGTGGAATCTCCCCAGGGATTGAAAAGTAA...CGACCCCCTTATCCATTGTGTCTTGCTAACCTTTTTGAAGCAAGAAATTAAACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp AACTCTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACAAGGGAAGCTGGCTCTaGAGAAACCATATGTTGTTG +
Preference number: 4 (lower is better)
Translates to: NSEPGRQSILRHRIARYNKGSWL*RNHMLL
Trigger: CAACAACATATGGTTTCTCCAGAGCCAGCTTCCCTT...GTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR CCA 90 bp CTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACAAATCTCCTTAAGGGAAGCTaGCTCTGGAGAAACCATATG +
Preference number: 4 (lower is better)
Translates to: LNLEDRVYLGTELPDITNLLKGS*LWRNHM
Trigger: CATATGGTTTCTCCAGAGCCAGCTTCCCTTAAGGAG...ATTTGTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
3UTR CAA 72 bp AGGCTTGTGGAAAGAAGAAAGCTGGGAGCCAGTATCTaGAAGGAAACCCTTCAAAGAAATTGTTCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: RLVERRKLGASI*KETLQRNCSLN
Trigger: ATTCAGAGAACAATTTCTTTGAAGGGTTTCCTTCAAGATACTGGCTCCCAGCTTTCTTCTTTCCACAAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTGTTCTATGGCTTCCTTaGAGAACACCATGGAATGAG +
Preference number: 4 (lower is better)
Translates to: NKQLDKPPVENTSEPELSVLWLP*RTPWNE
Trigger: CTCATTCCATGGTGTTCTTCAAGGAAGCCATAGAAC...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTACTGCTGGCCATTCTTaGTCAAGATGGCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: NKQLDKPPVENTSEPELSTAGHS*SRWHSL
Trigger: TAGAGAATGCCATCTTGATCAAGAATGGCCAGCAGT...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp AACTCTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACGCTATTTCAGCTGGTTaGGTCTCTAATGGTTTCACA +
Preference number: 4 (lower is better)
Translates to: NSEPGRQSILRHRIARYNAISAG*VSNGFT
Trigger: TGTGAAACCATTAGAGACTCAACCAGCTGAAATAGC...GTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAGAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR CCA 90 bp CTCCTGACTATGTTGAGTTTCTTTGGCATAAATACGGAGAACTTCTCATCCTTGGAACCATCAGAACAGTaGGTTTCCCTTTTAATCCTG +
Preference number: 4 (lower is better)
Translates to: LLTMLSFFGINTENFSSLEPSEQ*VSLLIL
Trigger: CAGGATTAAAAGGGAAACCCACTGTTCTGATGGTTC...CAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp TCTCGATATTTCCAACAGCCAGAGCAGTTTTGGACCCATATTTTAAATAAACAGTGCAGATCCTGGAACTaGCAGACATATCCCATCACT +
Preference number: 4 (lower is better)
Translates to: SRYFQQPEQFWTHILNKQCRSWN*QTYPIT
Trigger: AGTGATGGGATATGTCTGCCAGTTCCAGGATCTGCA...CTGTTTATTTAAAATATGGGTCCAAAACTGCTCTGGCTGTTGGAAATATCGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp CGTTTAATTTCTTGCTTCAAAAAGGTTAGCAAGACACAATGGATAAGGGGGTCGGGCAGTGGTAGTTTTTaGTTGCATGGCAATCAGATT +
Preference number: 4 (lower is better)
Translates to: RLISCFKKVSKTQWIRGSGSGSF*LHGNQI
Trigger: AATCTGATTGCCATGCAACCAAAAACTACCACTGCC...CGACCCCCTTATCCATTGTGTCTTGCTAACCTTTTTGAAGCAAGAAATTAAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp AACTCTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACGTCTTGGTTTTGTCTTaGTTTCCTCCTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: NSEPGRQSILRHRIARYNVLVLS*FPPCPS
Trigger: AGATGGACAAGGAGGAAACCAAGACAAAACCAAGAC...GTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR CCA 90 bp GAATTGACTCAAATTCCAATTGGACTTTGTAGCTCCTTCCAGAATTCTCACATACTCCTTAAGGGAAGCTaGCTCTGGAGAAACCATATG +
Preference number: 4 (lower is better)
Translates to: ELTQIPIGLCSSFQNSHILLKGS*LWRNHM
Trigger: CATATGGTTTCTCCAGAGCCAGCTTCCCTTAAGGAG...TATGTGAGAATTCTGGAAGGAGCTACAAAGTCCAATTGGAATTTGAGTCAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366849.5
CDS-3UTR CCA 90 bp CTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACAAATAGTTGTTTCAATGCCTaGGTAGCTTGCTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: LNLEDRVYLGTELPDITNSCFNA*VACCNC
Trigger: GCAGTTACAGCAAGCTACCCAGGCATTGAAACAACT...ATTTGTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR TCA 90 bp AAATCCTCAAAACAGTTGAAGACCACACAATGTTTGCCTAAGGATTTTGCTAGACGTAATAACCAATCTTaGGGTACAGCCCAAGTACTC +
Preference number: 4 (lower is better)
Translates to: KSSKQLKTTQCLPKDFARRNNQS*GTAQVL
Trigger: GAGTACTTGGGCTGTACCTCAAGATTGGTTATTACG...TCTAGCAAAATCCTTAGGCAAACATTGTGTGGTCTTCAACTGTTTTGAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495456.1
CDS-3UTR TCA 90 bp TCTCGATATTTCCAACAGCCAGAGCAGTTTTGGACCCATATTTTAAATAAACAGTCAATTAAGCGATCGTaGAATACTCGGGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SRYFQQPEQFWTHILNKQSIKRS*NTRVAS
Trigger: TGAAGCCACCCGAGTATTTCACGATCGCTTAATTGA...CTGTTTATTTAAAATATGGGTCCAAAACTGCTCTGGCTGTTGGAAATATCGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp GTCTATAAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCAAGAGAAAGGTGTGCTaGTCAGAGAATAAACTGCTT +
Preference number: 4 (lower is better)
Translates to: VYKRTRHHHHQFRSTACVKRKVC*SENKLL
Trigger: AAGCAGTTTATTCTCTGATCAGCACACCTTTCTCTT...GACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTTATAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp CTCCTGACTATGTTGAGTTTCTTTGGCATAAATACGGAGAACTTCTCATCCTTGTGGATAAGGGGGTCGTaGTCTTTGAGATTTTTAGAA +
Preference number: 4 (lower is better)
Translates to: LLTMLSFFGINTENFSSLWIRGS*SLRFLE
Trigger: TTCTAAAAATCTCAAAGATCACGACCCCCTTATCCA...CAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTTGGGTTCAAAGCTTATaGTCTGCCTCTTTGAACCTT +
Preference number: 4 (lower is better)
Translates to: NKQLDKPPVENTSEPELSWVQSL*SASLNL
Trigger: AAGGTTCAAAGAGGCAGATCATAAGCTTTGAACCCA...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp TTAAAAACTAACTCTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCGCTATTTCAGCTGGTTaGGTCTCTAATGGTTTCACA +
Preference number: 4 (lower is better)
Translates to: LKTNSEPGRQSILRHRIAAISAG*VSNGFT
Trigger: TGTGAAACCATTAGAGACTCAACCAGCTGAAATAGC...GGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAGAGTTAGTTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR TCA 90 bp TTAAAAACTAACTCTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCATGGTGGTACAAAAATaGCCTGCTCTTCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LKTNSEPGRQSILRHRIAMVVQK*PALLCL
Trigger: AAGACAGAGAAGAGCAGGTCATTTTTGTACCACCAT...GGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAGAGTTAGTTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR GCA 90 bp CTCTTGTGCAAATCTCAGGAGGATATTGGTAAGGTCGATCCCATGAGTTTGAATCAGTTAGGTTTCTTTTaGAGAAGAATACACACTGCA +
Preference number: 4 (lower is better)
Translates to: LLCKSQEDIGKVDPMSLNQLGFF*RRIHTA
Trigger: TGCAGTGTGTATTCTTCTGCAAAAGAAACCTAACTG...ATTCAAACTCATGGGATCGACCTTACCAATATCCTCCTGAGATTTGCACAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTGTATCAGCGGAGTTCTaGCATTGGATCCTTTATATG +
Preference number: 4 (lower is better)
Translates to: NKQLDKPPVENTSEPELSVSAEF*HWILYM
Trigger: CATATAAAGGATCCAATGCCAGAACTCCGCTGATAC...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTTCTCATCCTTGTCAGTaGTGTTGGAAATCACATGGT +
Preference number: 4 (lower is better)
Translates to: NKQLDKPPVENTSEPELSSHPCQ*CWKSHG
Trigger: ACCATGTGATTTCCAACACCACTGACAAGGATGAGA...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GAATTGACTCAAATTCCAATTGGACTTTGTAGCTCCTTCCAGAATTCTCACATAAAGGGAAGCTGGCTCTaGAGAAACCATATGTTGTTG +
Preference number: 4 (lower is better)
Translates to: ELTQIPIGLCSSFQNSHIKGSWL*RNHMLL
Trigger: CAACAACATATGGTTTCTCCAGAGCCAGCTTCCCTT...TATGTGAGAATTCTGGAAGGAGCTACAAAGTCCAATTGGAATTTGAGTCAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366849.5
CDS-3UTR TCA 90 bp GTCTATAAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCAAATCTTGTGTGGGTTaGAATCAGGTAAGGTTACAA +
Preference number: 4 (lower is better)
Translates to: VYKRTRHHHHQFRSTACVKSCVG*NQVRLQ
Trigger: TTGTAACCTTACCTGATTTCAACCCACACAAGATTT...GACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTTATAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR TCA 90 bp CGTTTAATTTCTTGCTTCAAAAAGGTTAGCAAGACACAATGGATAAGGGGGTCGATTTTAAGGACGTTTTaGGCTTCAGCTACTTGGATT +
Preference number: 4 (lower is better)
Translates to: RLISCFKKVSKTQWIRGSILRTF*ASATWI
Trigger: AATCCAAGTAGCTGAAGCTCAAAACGTCCTTAAAAT...CGACCCCCTTATCCATTGTGTCTTGCTAACCTTTTTGAAGCAAGAAATTAAACG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp CTCCTGACTATGTTGAGTTTCTTTGGCATAAATACGGAGAACTTCTCATCCTTGATCAAGAGCTCTTCTTaGATTTCTGTAACTAGAGTG +
Preference number: 4 (lower is better)
Translates to: LLTMLSFFGINTENFSSLIKSSS*ISVTRV
Trigger: CACTCTAGTTACAGAAATGCAAGAAGAGCTCTTGAT...CAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp CTCTTGTGCAAATCTCAGGAGGATATTGGTAAGGTCGATCCCATGAGTTTGAATTTTTTGTTGCTTCGATaGGCTTTGAAATTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: LLCKSQEDIGKVDPMSLNFLLLR*ALKFRL
Trigger: CAAACGAAATTTCAAAGCGCATCGAAGCAACAAAAA...ATTCAAACTCATGGGATCGACCTTACCAATATCCTCCTGAGATTTGCACAAGAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTAGTAGAAAATTTAGTTaGCTGCAGCTCCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: NKQLDKPPVENTSEPELSSRKFS*LQLQFQ
Trigger: CTGGAATTGGAGCTGCAGGCAACTAAATTTTCTACT...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp AACTCTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACGTAGCTTGCTGTAACTaGTCTTCACAAAATTCATCT +
Preference number: 4 (lower is better)
Translates to: NSEPGRQSILRHRIARYNVACCN*SSQNSS
Trigger: AGATGAATTTTGTGAAGAGCAGTTACAGCAAGCTAC...GTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR CCA 90 bp TTAAAAACTAACTCTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCGGCTTTCCTAACATTTaGACAAGCATGAGTTTGATC +
Preference number: 4 (lower is better)
Translates to: LKTNSEPGRQSILRHRIAGFPNI*TSMSLI
Trigger: GATCAAACTCATGCTTGTCCAAATGTTAGGAAAGCC...GGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAGAGTTAGTTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR CCA 90 bp CTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACAAATGGCTTTCCTAACATTTaGACAAGCATGAGTTTGATC +
Preference number: 4 (lower is better)
Translates to: LNLEDRVYLGTELPDITNGFPNI*TSMSLI
Trigger: GATCAAACTCATGCTTGTCCAAATGTTAGGAAAGCC...ATTTGTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR CCA 90 bp GTTAATAGCAAAAATGAGTACATGTACTCTGCCACAAGGAGAATTTTCAAACTCAGTTGTTTCAATGCCTaGGTAGCTTGCTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: VNSKNEYMYSATRRIFKLSCFNA*VACCNC
Trigger: GCAGTTACAGCAAGCTACCCAGGCATTGAAACAACT...GAGTTTGAAAATTCTCCTTGTGGCAGAGTACATGTACTCATTTTTGCTATTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR TCA 90 bp TCTCGATATTTCCAACAGCCAGAGCAGTTTTGGACCCATATTTTAAATAAACAGACAGTAGACAAGAGTTaGTCTTGCAAACCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: SRYFQQPEQFWTHILNKQTVDKS*SCKPWN
Trigger: ATTCCAAGGTTTGCAAGATCAACTCTTGTCTACTGT...CTGTTTATTTAAAATATGGGTCCAAAACTGCTCTGGCTGTTGGAAATATCGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR GCA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTCCATTAGCATTGTTTTaGATGATTACAGTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: NKQLDKPPVENTSEPELSPLALF*MITVQS
Trigger: GCTTTGCACTGTAATCATGCAAAACAATGCTAATGG...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp CGTTTAATTTCTTGCTTCAAAAAGGTTAGCAAGACACAATGGATAAGGGGGTCGAATCCTAGGAGAAGCTaGAAAATAGTACATAAGATG +
Preference number: 4 (lower is better)
Translates to: RLISCFKKVSKTQWIRGSNPRRS*KIVHKM
Trigger: CATCTTATGTACTATTTTCCAGCTTCTCCTAGGATT...CGACCCCCTTATCCATTGTGTCTTGCTAACCTTTTTGAAGCAAGAAATTAAACG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp GTTAATAGCAAAAATGAGTACATGTACTCTGCCACAAGGAGAATTTTCAAACTCGTCTTGGTTTTGTCTTaGTTTCCTCCTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: VNSKNEYMYSATRRIFKLVLVLS*FPPCPS
Trigger: AGATGGACAAGGAGGAAACCAAGACAAAACCAAGAC...GAGTTTGAAAATTCTCCTTGTGGCAGAGTACATGTACTCATTTTTGCTATTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR CCA 90 bp AACTCTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACCACATCATCATCTTTTaGTTCTGTTCTATCATAGGA +
Preference number: 4 (lower is better)
Translates to: NSEPGRQSILRHRIARYNHIIIF*FCSIIG
Trigger: TCCTATGATAGAACAGAACCAAAAGATGATGATGTG...GTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR CCA 90 bp AACTCTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACTACCTGAAGATCATATaGATTGTAAAGGGATTTAGG +
Preference number: 4 (lower is better)
Translates to: NSEPGRQSILRHRIARYNYLKII*IVKGFR
Trigger: CCTAAATCCCTTTACAATCCATATGATCTTCAGGTA...GTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAGAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400952.7
CDS-3UTR GCA 90 bp CTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACAAATTATTTCAAACTGTGCTaGGGTAATATAGTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LNLEDRVYLGTELPDITNYFKLC*GNIVCQ
Trigger: TTGGCAAACTATATTACCGCAGCACAGTTTGAAATA...ATTTGTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR GCA 90 bp GTTAATAGCAAAAATGAGTACATGTACTCTGCCACAAGGAGAATTTTCAAACTCCCGTATTTCAAACTGTaGTGCGGTAATATAGTTTGC +
Preference number: 4 (lower is better)
Translates to: VNSKNEYMYSATRRIFKLPYFKL*CGNIVC
Trigger: GCAAACTATATTACCGCAGCACAGTTTGAAATACGG...GAGTTTGAAAATTCTCCTTGTGGCAGAGTACATGTACTCATTTTTGCTATTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR GCA 90 bp TTAAAAACTAACTCTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGTAATCTTCTGAATTaGAATTTTGGAGCTTCCGTA +
Preference number: 4 (lower is better)
Translates to: LKTNSEPGRQSILRHRIASNLLN*NFGASV
Trigger: TACGGAAGCTCCAAAATTGCAATTCAGAAGATTACT...GGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAGAGTTAGTTTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR CCA 90 bp TCTCGATATTTCCAACAGCCAGAGCAGTTTTGGACCCATATTTTAAATAAACAGGATTTGGACACATGTTaGGGCAAGTTTTTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: SRYFQQPEQFWTHILNKQDLDTC*GKFFFQ
Trigger: TTGAAAGAAAAACTTGCCCCAACATGTGTCCAAATC...CTGTTTATTTAAAATATGGGTCCAAAACTGCTCTGGCTGTTGGAAATATCGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp TCTCGATATTTCCAACAGCCAGAGCAGTTTTGGACCCATATTTTAAATAAACAGCTTACTTCAACTCAGTaGAAGCTGGTTGTTTGTATA +
Preference number: 4 (lower is better)
Translates to: SRYFQQPEQFWTHILNKQLTSTQ*KLVVCI
Trigger: TATACAAACAACCAGCTTCCACTGAGTTGAAGTAAG...CTGTTTATTTAAAATATGGGTCCAAAACTGCTCTGGCTGTTGGAAATATCGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CCA 90 bp CTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACAAATAACCTGAAGATCATATaGATTGTAAAGGGATTTAGG +
Preference number: 4 (lower is better)
Translates to: LNLEDRVYLGTELPDITNNLKII*IVKGFR
Trigger: CCTAAATCCCTTTACAATCCATATGATCTTCAGGTT...ATTTGTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366849.5
CDS-3UTR GCA 90 bp GAATTGACTCAAATTCCAATTGGACTTTGTAGCTCCTTCCAGAATTCTCACATATATTTCAAACTGTGCTaGGGTAATATAGTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: ELTQIPIGLCSSFQNSHIYFKLC*GNIVCQ
Trigger: TTGGCAAACTATATTACCGCAGCACAGTTTGAAATA...TATGTGAGAATTCTGGAAGGAGCTACAAAGTCCAATTGGAATTTGAGTCAATTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366849.5
CDS-3UTR GCA 90 bp GTTAATAGCAAAAATGAGTACATGTACTCTGCCACAAGGAGAATTTTCAAACTCAGTAATCTTCTGAATTaGAATTTTGGAGCTTCCGTA +
Preference number: 4 (lower is better)
Translates to: VNSKNEYMYSATRRIFKLSNLLN*NFGASV
Trigger: TACGGAAGCTCCAAAATTGCAATTCAGAAGATTACT...GAGTTTGAAAATTCTCCTTGTGGCAGAGTACATGTACTCATTTTTGCTATTAAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS CCA 90 bp GAACTGGCCGCCGCGCCGTGGTCCGACGGCCGTTGTGGCCCTTCCTaGAAGCGGCGAAGGTCCGGCCCGCCCACGCCGGCGAGCGCCAGA +
Preference number: 5 (lower is better)
Translates to: ELAAAPWSDGRCGPS*KRRRSGPPTPASAR
Trigger: TCTGGCGCTCGCCGGCGTGGGCGGGCCGGACCTTCGCCGCTTCCAGGAAGGGCCACAACGGCCGTCGGACCACGGCGCGGCGGCCAGTTC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366849.5
ENST00000366850.7
ENST00000400952.7
ENST00000430092.5
ENST00000498360.5
ENST00000682510.1
CDS CCA 90 bp CGCGGCGCAAGGGATCCTGGGTGCCGGGCAGGTGAGGAGGGGCCCTaGCTCTTGCGAGATTCCACCGCGGGTACGCGGCGGCCCCCGATG +
Preference number: 5 (lower is better)
Translates to: RGARDPGCRAGEEGP*LLRDSTAGTRRPPM
Trigger: CATCGGGGGCCGCCGCGTACCCGCGGTGGAATCTCGCAAGAGCCAGGGCCCCTCCTCACCTGCCCGGCACCCAGGATCCCTTGCGCCGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS CCA 90 bp TGTTTTTCCGCCGCGCCGTGGTCCGACGGCCGTTGTGGCCCTTCCTaGAAGCGGCGAAGGTCCGGCCCGCCCACGCCGGCGAGCGCCAGA +
Preference number: 5 (lower is better)
Translates to: CFSAAPWSDGRCGPS*KRRRSGPPTPASAR
Trigger: TCTGGCGCTCGCCGGCGTGGGCGGGCCGGACCTTCGCCGCTTCCAGGAAGGGCCACAACGGCCGTCGGACCACGGCGCGGCGGAAAAACA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS GCA 90 bp CAAGGGATCCTGGGTGCCGGGCAGGTGAGGAGGGGCCCTGGCTCTTaGGAGATTCCACCGCGGGTACGCGGCGGCCCCCGATGTGACACC +
Preference number: 5 (lower is better)
Translates to: QGILGAGQVRRGPGS*EIPPRVRGGPRCDT
Trigger: GGTGTCACATCGGGGGCCGCCGCGTACCCGCGGTGGAATCTCGCAAGAGCCAGGGCCCCTCCTCACCTGCCCGGCACCCAGGATCCCTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS CCA 90 bp AACTATAAAGGAACTGGCCGCCGCGCCGTGGTCCGACGGCCGTTGTaGCCCTTCCTGGAAGCGGCGAAGGTCCGGCCCGCCCACGCCGGC +
Preference number: 5 (lower is better)
Translates to: NYKGTGRRAVVRRPL*PFLEAAKVRPAHAG
Trigger: GCCGGCGTGGGCGGGCCGGACCTTCGCCGCTTCCAGGAAGGGCCACAACGGCCGTCGGACCACGGCGCGGCGGCCAGTTCCTTTATAGTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366849.5
ENST00000366850.7
ENST00000400952.7
ENST00000430092.5
ENST00000498360.5
ENST00000682510.1
CDS CCA 90 bp CGTCTCCATATGTTTTTCCGCCGCGCCGTGGTCCGACGGCCGTTGTaGCCCTTCCTGGAAGCGGCGAAGGTCCGGCCCGCCCACGCCGGC +
Preference number: 5 (lower is better)
Translates to: RLHMFFRRAVVRRPL*PFLEAAKVRPAHAG
Trigger: GCCGGCGTGGGCGGGCCGGACCTTCGCCGCTTCCAGGAAGGGCCACAACGGCCGTCGGACCACGGCGCGGCGGAAAAACATATGGAGACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS-3UTR CAA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGGTGAGTGCTGACATATaGGCACTGCCTCCACCTGGA +
Preference number: 5 (lower is better)
Translates to: PELSLDAAWASLLTQGRQVSADI*ALPPPG
Trigger: TCCAGGTGGAGGCAGTGCCAATATGTCAGCACTCAC...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTACTCCCAAATGGAGCTaGACATCATGCTCTTCAATG +
Preference number: 5 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSTPKWS*TSCSSM
Trigger: CATTGAAGAGCATGATGTCAAGCTCCATTTGGGAGT...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTTCTCCTCAGAGTCTTTaGCCTTGTAGGACAAACTCT +
Preference number: 5 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSSPQSL*PCRTNS
Trigger: AGAGTTTGTCCTACAAGGCAAAAGACTCTGAGGAGA...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS TCA 90 bp CCCCGATGTGACACCGACGGTGCCAGTCAGAGACTGCAACTCCTGTaGTGCCACAGAACCAACAGCATCCAGCAGAGGAAAGGGTGCATT +
Preference number: 5 (lower is better)
Translates to: PRCDTDGASQRLQLL*CHRTNSIQQRKGCI
Trigger: AATGCACCCTTTCCTCTGCTGGATGCTGTTGGTTCTGTGGCATCACAGGAGTTGCAGTCTCTGACTGGCACCGTCGGTGTCACATCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS-3UTR CAA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGGATCCATTTGTGAGCTaGCCTATGTGGGTCAATCAG +
Preference number: 5 (lower is better)
Translates to: PELSLDAAWASLLTQGRQDPFVS*PMWVNQ
Trigger: CTGATTGACCCACATAGGCAAGCTCACAAATGGATC...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGGAAACCAGCGAAATCTaGTGTGGGTTGAAATCAGGT +
Preference number: 5 (lower is better)
Translates to: PELSLDAAWASLLTQGRQETSEI*CGLKSG
Trigger: ACCTGATTTCAACCCACACAAGATTTCGCTGGTTTC...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp GCCTGGAGGAGCTGGTGGCCAAGTACCAGGCCACCCTGGAGGGCTCTGCCATCTACTCATGAACTTCTTTaGGAGACACTTTCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: AWRSWWPSTRPPWRALPSTHELL*ETLSPF
Trigger: AAAGGGAGAAAGTGTCTCCAAAAGAAGTTCATGAGT...AGATGGCAGAGCCCTCCAGGGTGGCCTGGTACTTGGCCACCAGCTCCTCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGGTCTTCAAGCATCGCTaGTCCCAATTATCAATCACC +
Preference number: 5 (lower is better)
Translates to: PELSLDAAWASLLTQGRQVFKHR*SQLSIT
Trigger: GGTGATTGATAATTGGGACAAGCGATGCTTGAAGAC...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGACTTTGGCCCAAGTATaGAAGAAATTCAGTCGCTGG +
Preference number: 5 (lower is better)
Translates to: PELSLDAAWASLLTQGRQTLAQV*KKFSRW
Trigger: CCAGCGACTGAATTTCTTCAATACTTGGGCCAAAGT...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp CAGTCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAGCAGCCTGGGCCAGCTaGTTGACACAGGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: QSLDEIINPGTQWLTRSVAAWAS*LTQGRQ
Trigger: CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGC...TACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS CCA 90 bp CTACACACGTCAGTGTGCCTGTCACAAGCAGTGCTGGTCAGCCATTaGCCTCTCCCTACAGGACCAAGGTCTGTTCCTGTATGGTTTATG +
Preference number: 5 (lower is better)
Translates to: LHTSVCLSQAVLVSH*PLPTGPRSVPVWFM
Trigger: CATAAACCATACAGGAACAGACCTTGGTCCTGTAGGGAGAGGCCAATGGCTGACCAGCACTGCTTGTGACAGGCACACTGACGTGTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS-3UTR CAA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGGAAATCTTGTGTGGGTaGAAATCAGGTAAGGTTACA +
Preference number: 5 (lower is better)
Translates to: PELSLDAAWASLLTQGRQEILCG*KSGKVT
Trigger: TGTAACCTTACCTGATTTCAACCCACACAAGATTTC...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp TCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAGGCCAGGTAGCGCAGTGCTaGCCACGAAATGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SLDEIINPGTQWLTRSVGQVAQC*PRNAGL
Trigger: CAGCCCAGCATTTCGTGGCAAGCACTGCGCTACCTG...GCCTACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp CCTGAGCTCTCCCTTGATGCAGCCTGGGCCAGCTTGTTGACACAGGGGAGGCAGAAGTCTTTCATGCTTTaGTGGATTTGGACACATGTT +
Preference number: 5 (lower is better)
Translates to: PELSLDAAWASLLTQGRQKSFML*WIWTHV
Trigger: AACATGTGTCCAAATCCACAAAAGCATGAAAGACTT...CTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGCTGCATCAAGGGAGAGCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp AATCACTTCTCCAATCAGGTAGCGCAGTGCTTGCCACGAAATGCTGGGCTGTCCTCCTTGTCAGTGGTGTaGGAAATCACATGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: NHFSNQVAQCLPRNAGLSSLSVV*EITWWV
Trigger: CACCCACCATGTGATTTCCAACACCACTGACAAGGA...GGACAGCCCAGCATTTCGTGGCAAGCACTGCGCTACCTGATTGGAGAAGTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS GCA 90 bp GGGACTCCATCATTTAAAGCAAAACTGAAGCTACACACGTCAGTGTaGCTGTCACAAGCAGTGCTGGTCAGCCATTGGCCTCTCCCTACA +
Preference number: 5 (lower is better)
Translates to: GTPSFKAKLKLHTSV*LSQAVLVSHWPLPT
Trigger: TGTAGGGAGAGGCCAATGGCTGACCAGCACTGCTTGTGACAGGCACACTGACGTGTGTAGCTTCAGTTTTGCTTTAAATGATGGAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS CCA 90 bp CCTGGATCCTTCCATCTGACGGATCCATTTGTGAGCTTGCCTATGTaGGTCAATCAGCAGTGGCCACTGCTGGCCATTCTTGATCAAGAT +
Preference number: 5 (lower is better)
Translates to: PGSFHLTDPFVSLPM*VNQQWPLLAILDQD
Trigger: ATCTTGATCAAGAATGGCCAGCAGTGGCCACTGCTGATTGACCCACATAGGCAAGCTCACAAATGGATCCGTCAGATGGAAGGATCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS CCA 90 bp CTAATAAATGTTCATGAAATCTTCACAATCCACGTTCTTCTGCCATaGCTTCGGCCGGTCCCTCCGTTCGGGGTCCCTGACTTCCGGAAA +
Preference number: 5 (lower is better)
Translates to: LINVHEIFTIHVLLP*LRPVPPFGVPDFRK
Trigger: TTTCCGGAAGTCAGGGACCCCGAACGGAGGGACCGGCCGAAGCCATGGCAGAAGAACGTGGATTGTGAAGATTTCATGAACATTTATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453375.1
CDS-3UTR CAA 90 bp GTCAGTGGTGTTGGAAATCACATGGTGGGTGAAGGTGAGGGCATCCACAGCGATCATGCTTTTGTGGATTaGGACACATGTTGGGGCAAG +
Preference number: 5 (lower is better)
Translates to: VSGVGNHMVGEGEGIHSDHAFVD*DTCWGK
Trigger: CTTGCCCCAACATGTGTCCAAATCCACAAAAGCATG...ATCGCTGTGGATGCCCTCACCTTCACCCACCATGTGATTTCCAACACCACTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp AATCACTTCTCCAATCAGGTAGCGCAGTGCTTGCCACGAAATGCTGGGCTGTCCCACTGCTGGCCATTCTaGATCAAGATGGCATTCTCT +
Preference number: 5 (lower is better)
Translates to: NHFSNQVAQCLPRNAGLSHCWPF*IKMAFS
Trigger: AGAGAATGCCATCTTGATCAAGAATGGCCAGCAGTG...GGACAGCCCAGCATTTCGTGGCAAGCACTGCGCTACCTGATTGGAGAAGTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp GTCAGTGGTGTTGGAAATCACATGGTGGGTGAAGGTGAGGGCATCCACAGCGATCTGGGAGCCAGTATCTaGAAGGAAACCCTTCAAAGA +
Preference number: 5 (lower is better)
Translates to: VSGVGNHMVGEGEGIHSDLGASI*KETLQR
Trigger: TCTTTGAAGGGTTTCCTTCAAGATACTGGCTCCCAG...ATCGCTGTGGATGCCCTCACCTTCACCCACCATGTGATTTCCAACACCACTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp CTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACAAATGTGGTCCGACGGCCGTaGTGGCCCTTCCTGGAAGCG +
Preference number: 5 (lower is better)
Translates to: LNLEDRVYLGTELPDITNVVRRP*WPFLEA
Trigger: CGCTTCCAGGAAGGGCCACAACGGCCGTCGGACCAC...ATTTGTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS TCA 90 bp CAGTGGCCACTGCTGGCCATTCTTGATCAAGATGGCATTCTCTACTaGATACTGACCATGAGGCAGTCCCTGATTATGCCATCGGCTGAT +
Preference number: 5 (lower is better)
Translates to: QWPLLAILDQDGILY*ILTMRQSLIMPSAD
Trigger: ATCAGCCGATGGCATAATCAGGGACTGCCTCATGGTCAGTATTCAGTAGAGAATGCCATCTTGATCAAGAATGGCCAGCAGTGGCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS TCA 90 bp CTTGCCTATGTGGGTCAATCAGCAGTGGCCACTGCTGGCCATTCTTaGTCAAGATGGCATTCTCTACTGAATACTGACCATGAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: LAYVGQSAVATAGHS*SRWHSLLNTDHEAV
Trigger: GACTGCCTCATGGTCAGTATTCAGTAGAGAATGCCATCTTGATCAAGAATGGCCAGCAGTGGCCACTGCTGATTGACCCACATAGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS GCA 90 bp TCAAGCGGAACTGACTTCCCAATAATCTCCTGGAGAGCCTCCCAATaGCTTGGCTTGAGACAGGGATTTCCCAGAGCTATAATGATAGGC +
Preference number: 5 (lower is better)
Translates to: SSGTDFPIISWRASQ*LGLRQGFPRAIMIG
Trigger: GCCTATCATTATAGCTCTGGGAAATCCCTGTCTCAAGCCAAGGCATTGGGAGGCTCTCCAGGAGATTATTGGGAAGTCAGTTCCGCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000682510.1
CDS CCA 90 bp GTCAGCCATTGGCCTCTCCCTACAGGACCAAGGTCTGTTCCTGTATaGTTTATGGCACGGAGAAGCAGGCAGAAAGTATGTTTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: VSHWPLPTGPRSVPV*FMARRSRQKVCFSS
Trigger: AGAGGAAAAACATACTTTCTGCCTGCTTCTCCGTGCCATAAACCATACAGGAACAGACCTTGGTCCTGTAGGGAGAGGCCAATGGCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS-3UTR CAA 90 bp AGATTCAAGTGTAGTGCTTCCATGAGAGTCAGCCAGCATCGGTCTGTGAGAGGCTTACACGAATTTTCTTaGGCAGCACGAGACCTTCCC +
Preference number: 5 (lower is better)
Translates to: RFKCSASMRVSQHRSVRGLHEFS*AARDLP
Trigger: GGGAAGGTCTCGTGCTGCCAAAGAAAATTCGTGTAA...GCCTCTCACAGACCGATGCTGGCTGACTCTCATGGAAGCACTACACTTGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495456.1
CDS-3UTR CAA 90 bp GTCAGTGGTGTTGGAAATCACATGGTGGGTGAAGGTGAGGGCATCCACAGCGATAGCATGGAAAAGTGTTaGAGAAGACGTGGGCTGATA +
Preference number: 5 (lower is better)
Translates to: VSGVGNHMVGEGEGIHSDSMEKC*RRRGLI
Trigger: TATCAGCCCACGTCTTCTCAAACACTTTTCCATGCT...ATCGCTGTGGATGCCCTCACCTTCACCCACCATGTGATTTCCAACACCACTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp GTCTATAAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCGCCTGGGCCAGCTTGTaGACACAGGGGAGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: VYKRTRHHHHQFRSTACVAWASL*TQGRQC
Trigger: ACACTGCCTCCCCTGTGTCAACAAGCTGGCCCAGGC...GACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTTATAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS TCA 90 bp CAGAACCAACAGCATCCAGCAGAGGAAAGGGTGCATTACATCTTATaGGGCATTCTATCTTGGAAGCAATGCAGCCACATCCCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: QNQQHPAEERVHYIL*GILSWKQCSHIPEH
Trigger: GTGCTCTGGGATGTGGCTGCATTGCTTCCAAGATAGAATGCCTCATAAGATGTAATGCACCCTTTCCTCTGCTGGATGCTGTTGGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS CCA 90 bp ATTGGCCTCTCCCTACAGGACCAAGGTCTGTTCCTGTATGGTTTATaGCACGGAGAAGCAGGCAGAAAGTATGTTTTTCCTCTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: IGLSLQDQGLFLYGL*HGEAGRKYVFPLVV
Trigger: AACCACCAGAGGAAAAACATACTTTCTGCCTGCTTCTCCGTGCCATAAACCATACAGGAACAGACCTTGGTCCTGTAGGGAGAGGCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS-3UTR CAA 90 bp GTTAATAGCAAAAATGAGTACATGTACTCTGCCACAAGGAGAATTTTCAAACTCGTGGTCCGACGGCCGTaGTGGCCCTTCCTGGAAGCG +
Preference number: 5 (lower is better)
Translates to: VNSKNEYMYSATRRIFKLVVRRP*WPFLEA
Trigger: CGCTTCCAGGAAGGGCCACAACGGCCGTCGGACCAC...GAGTTTGAAAATTCTCCTTGTGGCAGAGTACATGTACTCATTTTTGCTATTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS CCA 90 bp CTCAAAGGCTGTAATCGAGGTGTTGCTTGGGAATGGATTCTCATTTaGAGGCTCTATTGGGAAAAGATCTGCTTCCAAGCTCCCTCAGGT +
Preference number: 5 (lower is better)
Translates to: LKGCNRGVAWEWILI*RLYWEKICFQAPSG
Trigger: ACCTGAGGGAGCTTGGAAGCAGATCTTTTCCCAATAGAGCCTCCAAATGAGAATCCATTCCCAAGCAACACCTCGATTACAGCCTTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498360.5
CDS-3UTR CAA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTCATGTGACTCCCTGGTaGTCGAAGAACCCTTGTTGC +
Preference number: 5 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSHVTPW*SKNPCC
Trigger: GCAACAAGGGTTCTTCGACAACCAGGGAGTCACATG...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp TCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAGGCTGGTTGCTTCCAGGATaGTGGATAGACCCATATGGA +
Preference number: 5 (lower is better)
Translates to: SLDEIINPGTQWLTRSVGWLLPG*WIDPYG
Trigger: TCCATATGGGTCTATCCACAATCCTGGAAGCAACCA...GCCTACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp ACTCAGTGGCTTACAAGATCTGTAGGCGTGTTTCTGCCACAATGTAGGCACTCTTTGAGCTTCAGCTACTaGGATTTGTTTAGGGCCCAC +
Preference number: 5 (lower is better)
Translates to: TQWLTRSVGVFLPQCRHSLSFSY*DLFRAH
Trigger: GTGGGCCCTAAACAAATCCAAGTAGCTGAAGCTCAA...AGAGTGCCTACATTGTGGCAGAAACACGCCTACAGATCTTGTAAGCCACTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp AATCACTTCTCCAATCAGGTAGCGCAGTGCTTGCCACGAAATGCTGGGCTGTCCTTTCCTCTGGTGGTTTaGTATTTTCCTCCAATGAAG +
Preference number: 5 (lower is better)
Translates to: NHFSNQVAQCLPRNAGLSFPLVV*YFPPMK
Trigger: CTTCATTGGAGGAAAATACAAAACCACCAGAGGAAA...GGACAGCCCAGCATTTCGTGGCAAGCACTGCGCTACCTGATTGGAGAAGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp TTTCCTGTACCAGCTGGACCGGCAGGACAGCCTCCTAGATTCAAGTGTAGTGCTAAGACCACACAATGTTaGCCTAAGGATTTTGCTAGA +
Preference number: 5 (lower is better)
Translates to: FPVPAGPAGQPPRFKCSAKTTQC*PKDFAR
Trigger: TCTAGCAAAATCCTTAGGCAAACATTGTGTGGTCTT...AGCACTACACTTGAATCTAGGAGGCTGTCCTGCCGGTCCAGCTGGTACAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495456.1
CDS TCA 90 bp ATAAAAGGGATTTGCACAGAAGTGAAAATGGTTCCAGGTGAGTGCTaGCATATTGGCACTGCCTCCACCTGGAATCTGACAGCCACTGAA +
Preference number: 5 (lower is better)
Translates to: IKGICTEVKMVPGEC*HIGTASTWNLTATE
Trigger: TTCAGTGGCTGTCAGATTCCAGGTGGAGGCAGTGCCAATATGTCAGCACTCACCTGGAACCATTTTCACTTCTGTGCAAATCCCTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS TCA 90 bp ACGTTTGATAAAAGGGATTTGCACAGAAGTGAAAATGGTTCCAGGTaGGTGCTGACATATTGGCACTGCCTCCACCTGGAATCTGACAGC +
Preference number: 5 (lower is better)
Translates to: TFDKRDLHRSENGSR*VLTYWHCLHLESDS
Trigger: GCTGTCAGATTCCAGGTGGAGGCAGTGCCAATATGTCAGCACTCACCTGGAACCATTTTCACTTCTGTGCAAATCCCTTTTATCAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS TCA 90 bp CGAGTCTTCTCATCTTCCAGGACAGTTAGTAAGACTGACGCACACTaGAAGCGCCTGCTGGCCATTGTTTTCCGATTTGCTAATAGTTGT +
Preference number: 5 (lower is better)
Translates to: RVFSSSRTVSKTDAH*KRLLAIVFRFANSC
Trigger: ACAACTATTAGCAAATCGGAAAACAATGGCCAGCAGGCGCTTTCAGTGTGCGTCAGTCTTACTAACTGTCCTGGAAGATGAGAAGACTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000682510.1
CDS TCA 90 bp CCTGAACATGTTCAACATCTGGGACTCCATCATTTAAAGCAAAACTaGAGCTACACACGTCAGTGTGCCTGTCACAAGCAGTGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: PEHVQHLGLHHLKQN*SYTRQCACHKQCWS
Trigger: TGACCAGCACTGCTTGTGACAGGCACACTGACGTGTGTAGCTTCAGTTTTGCTTTAAATGATGGAGTCCCAGATGTTGAACATGTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS GCA 90 bp CTTTGCCGTTGCCCAGTTAGGTTTCTTTTGCAGAAGAATACACACTaGATTCATGACAGTCAGTACAAGGAAGGGAGGCCGTGTGTATAC +
Preference number: 5 (lower is better)
Translates to: LCRCPVRFLLQKNTH*IHDSQYKEGRPCVY
Trigger: GTATACACACGGCCTCCCTTCCTTGTACTGACTGTCATGAATGCAGTGTGTATTCTTCTGCAAAAGAAACCTAACTGGGCAACGGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS CCA 90 bp CTTCCAGGACAGTTAGTAAGACTGACGCACACTGAAAGCGCCTGCTaGCCATTGTTTTCCGATTTGCTAATAGTTGTTTTTCAGCAACGG +
Preference number: 5 (lower is better)
Translates to: LPGQLVRLTHTESAC*PLFSDLLIVVFQQR
Trigger: CCGTTGCTGAAAAACAACTATTAGCAAATCGGAAAACAATGGCCAGCAGGCGCTTTCAGTGTGCGTCAGTCTTACTAACTGTCCTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000638635.1
ENST00000682510.1
CDS-3UTR CAA 90 bp AAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCTTCCCCGGAAGCGATCCCTCTTaGTTTGCATCTCTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: KRTRHHHHQFRSTACVFPGSDPS*FASLPL
Trigger: GAGAGGAAGAGATGCAAACAAAGAGGGATCGCTTCC...GGGGAAGACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp AAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCTTCCCCTTCAGCTTTAGCTGCTaGGTCACGGCCCAGAGAAAT +
Preference number: 5 (lower is better)
Translates to: KRTRHHHHQFRSTACVFPFSFSC*VTAQRN
Trigger: ATTTCTCTGGGCCGTGACCAAGCAGCTAAAGCTGAA...GGGGAAGACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp AAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCTTCCCCGGACCTCCCATAGTCTaGAAGCACAGCAGCAAGAAA +
Preference number: 5 (lower is better)
Translates to: KRTRHHHHQFRSTACVFPGPPIV*KHSSKK
Trigger: TTTCTTGCTGCTGTGCTTCAAGACTATGGGAGGTCC...GGGGAAGACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp GTCAGTGGTGTTGGAAATCACATGGTGGGTGAAGGTGAGGGCATCCACAGCGATTTATACTTGTGTAACTaGGTCATAGCTTACATGGGT +
Preference number: 5 (lower is better)
Translates to: VSGVGNHMVGEGEGIHSDLYLCN*VIAYMG
Trigger: ACCCATGTAAGCTATGACCAAGTTACACAAGTATAA...ATCGCTGTGGATGCCCTCACCTTCACCCACCATGTGATTTCCAACACCACTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS TCA 90 bp CTGATCTTCTCATCTTCCAGGACAGTTAGTAAGACTGACGCACACTaGAAGCGCCTGCTGGCCATTGTTTTCCGATTTGCTAATAGTTGT +
Preference number: 5 (lower is better)
Translates to: LIFSSSRTVSKTDAH*KRLLAIVFRFANSC
Trigger: ACAACTATTAGCAAATCGGAAAACAATGGCCAGCAGGCGCTTTCAGTGTGCGTCAGTCTTACTAACTGTCCTGGAAGATGAGAAGATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327794.10
ENST00000638635.1
CDS-3UTR CAA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTTCACCAGTTGGTAGGTaGATGCCTACTTGTGAACTG +
Preference number: 5 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSSPVGR*MPTCEL
Trigger: CAGTTCACAAGTAGGCATCAACCTACCAACTGGTGA...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp CTCCTGACTATGTTGAGTTTCTTTGGCATAAATACGGAGAACTTCTCATCCTTGAGAGCCACAATTGCCTaGTCAAAGGCTGGCAGCACA +
Preference number: 5 (lower is better)
Translates to: LLTMLSFFGINTENFSSLRATIA*SKAGST
Trigger: TGTGCTGCCAGCCTTTGACAAGGCAATTGTGGCTCT...CAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp TCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAGGCCCAGTTAGGTTTCTTTaGCAGAAGAATACACACTGC +
Preference number: 5 (lower is better)
Translates to: SLDEIINPGTQWLTRSVGPVRFL*QKNTHC
Trigger: GCAGTGTGTATTCTTCTGCAAAAGAAACCTAACTGG...GCCTACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp ACTCAGTGGCTTACAAGATCTGTAGGCGTGTTTCTGCCACAATGTAGGCACTCTTTTCTCAGCAAGTCTTaGTCGCGCAATTTTAAGGAC +
Preference number: 5 (lower is better)
Translates to: TQWLTRSVGVFLPQCRHSFLSKS*SRNFKD
Trigger: GTCCTTAAAATTGCGCGACAAAGACTTGCTGAGAAA...AGAGTGCCTACATTGTGGCAGAAACACGCCTACAGATCTTGTAAGCCACTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp AAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCTTCCCCAGCGCCTGCTGGCCATaGTTTTCCGATTTGCTAATA +
Preference number: 5 (lower is better)
Translates to: KRTRHHHHQFRSTACVFPSACWP*FSDLLI
Trigger: TATTAGCAAATCGGAAAACAATGGCCAGCAGGCGCT...GGGGAAGACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp TCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAGGCCACAGTAGACAAGAGTaGATCTTGCAAACCTTGGAA +
Preference number: 5 (lower is better)
Translates to: SLDEIINPGTQWLTRSVGHSRQE*ILQTLE
Trigger: TTCCAAGGTTTGCAAGATCAACTCTTGTCTACTGTG...GCCTACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp AAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCTTCCCCTGTAGTCCTTTATGCTaGCAGATCCTGGAACTGGCA +
Preference number: 5 (lower is better)
Translates to: KRTRHHHHQFRSTACVFPCSPLC*QILELA
Trigger: TGCCAGTTCCAGGATCTGCAAGCATAAAGGACTACA...GGGGAAGACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTAGCAGCAAGAAAGGCTaGTGGAAAGAAGAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSSSKKG*WKEESW
Trigger: CCAGCTTTCTTCTTTCCACAAGCCTTTCTTGCTGCT...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp CCTCCTAGATTCAAGTGTAGTGCTTCCATGAGAGTCAGCCAGCATCGGTCTGTGGATTTTGCTAGATCTTaGACAGTCTCAGTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: PPRFKCSASMRVSQHRSVDFARS*TVSVFP
Trigger: AGGAAAAACTGAGACTGTCAAAGATCTAGCAAAATC...CACAGACCGATGCTGGCTGACTCTCATGGAAGCACTACACTTGAATCTAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495456.1
CDS GCA 90 bp CATCTTCCAGGACAGTTAGTAAGACTGACGCACACTGAAAGCGCCTaGTGGCCATTGTTTTCCGATTTGCTAATAGTTGTTTTTCAGCAA +
Preference number: 5 (lower is better)
Translates to: HLPGQLVRLTHTESA*WPLFSDLLIVVFQQ
Trigger: TTGCTGAAAAACAACTATTAGCAAATCGGAAAACAATGGCCAGCAGGCGCTTTCAGTGTGCGTCAGTCTTACTAACTGTCCTGGAAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000638635.1
ENST00000682510.1
CDS-3UTR CAA 90 bp TCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAGGCAGTTCTCAAGTTCCCTaGAAAGCAACCGATAGAAAA +
Preference number: 5 (lower is better)
Translates to: SLDEIINPGTQWLTRSVGSSQVP*KATDRK
Trigger: TTTTCTATCGGTTGCTTTCAAGGGAACTTGAGAACT...GCCTACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTATACACTCTACAATTTaGGCGGAAGCTAGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSIHSTI*AEARSF
Trigger: GAAGGACCTAGCTTCCGCCAAAATTGTAGAGTGTAT...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp AAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCTTCCCCTTCAGCTACTTGGATTaGTTTAGGGCCCACAACCTT +
Preference number: 5 (lower is better)
Translates to: KRTRHHHHQFRSTACVFPFSYLD*FRAHNL
Trigger: AAGGTTGTGGGCCCTAAACAAATCCAAGTAGCTGAA...GGGGAAGACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp ACTCAGTGGCTTACAAGATCTGTAGGCGTGTTTCTGCCACAATGTAGGCACTCTTTGCTTCGATGCGCTTaGAAATTTCGTTTGATGTCA +
Preference number: 5 (lower is better)
Translates to: TQWLTRSVGVFLPQCRHSLLRCA*KFRLMS
Trigger: TGACATCAAACGAAATTTCAAAGCGCATCGAAGCAA...AGAGTGCCTACATTGTGGCAGAAACACGCCTACAGATCTTGTAAGCCACTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp TCGCTGGATGAGATCATCAATCCAGGAACTCAGTGGCTTACAAGATCTGTAGGCCAGCCACTGAAGATGTaGACTTTCACCTATTTCAAA +
Preference number: 5 (lower is better)
Translates to: SLDEIINPGTQWLTRSVGQPLKM*TFTYFK
Trigger: TTTGAAATAGGTGAAAGTCAACATCTTCAGTGGCTG...GCCTACAGATCTTGTAAGCCACTGAGTTCCTGGATTGATGATCTCATCCAGCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp CCTAGATTCAAGTGTAGTGCTTCCATGAGAGTCAGCCAGCATCGGTCTGTGAGAAAATCCTCAAAACAGTaGAAGACCACACAATGTTTG +
Preference number: 5 (lower is better)
Translates to: PRFKCSASMRVSQHRSVRKSSKQ*KTTQCL
Trigger: CAAACATTGTGTGGTCTTCAACTGTTTTGAGGATTT...TCTCACAGACCGATGCTGGCTGACTCTCATGGAAGCACTACACTTGAATCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495456.1
CDS TCA 90 bp GAGTTACTAGTATCCAGCACTACCAGGTCTGCAACCTCTTCTAGATaGCACATCAGACCAGCGTGGACTTTTTCCAATTTTTCTCTTGAA +
Preference number: 5 (lower is better)
Translates to: ELLVSSTTRSATSSR*HIRPAWTFSNFSLE
Trigger: TTCAAGAGAAAAATTGGAAAAAGTCCACGCTGGTCTGATGTGTCATCTAGAAGAGGTTGCAGACCTGGTAGTGCTGGATACTAGTAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000328556.9
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000682510.1
CDS TCA 90 bp CTTTGTTTCTCAGCAAGTCTTTGTCGCGCAATTTTAAGGACGTTTTaGGCTTCAGCTACTTGGATTTGTTTAGGGCCCACAACCTTCTGT +
Preference number: 5 (lower is better)
Translates to: LCFSASLCRAILRTF*ASATWICLGPTTFC
Trigger: ACAGAAGGTTGTGGGCCCTAAACAAATCCAAGTAGCTGAAGCTCAAAACGTCCTTAAAATTGCGCGACAAAGACTTGCTGAGAAACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS-3UTR CAA 90 bp CTCTTGTGCAAATCTCAGGAGGATATTGGTAAGGTCGATCCCATGAGTTTGAATAGCGGAGTTCTGGCATaGGATCCTTTATATGCATCT +
Preference number: 5 (lower is better)
Translates to: LLCKSQEDIGKVDPMSLNSGVLA*DPLYAS
Trigger: AGATGCATATAAAGGATCCAATGCCAGAACTCCGCT...ATTCAAACTCATGGGATCGACCTTACCAATATCCTCCTGAGATTTGCACAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp CTCTTGTGCAAATCTCAGGAGGATATTGGTAAGGTCGATCCCATGAGTTTGAATGAGAACTTCTCATCCTaGTCAGTGGTGTTGGAAATC +
Preference number: 5 (lower is better)
Translates to: LLCKSQEDIGKVDPMSLNENFSS*SVVLEI
Trigger: GATTTCCAACACCACTGACAAGGATGAGAAGTTCTC...ATTCAAACTCATGGGATCGACCTTACCAATATCCTCCTGAGATTTGCACAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTGTGATGCCTTCTGTGTaGTCCACTCTGGAATGTGAC +
Preference number: 5 (lower is better)
Translates to: NKQLDKPPVENTSEPELSVMPSV*STLECD
Trigger: GTCACATTCCAGAGTGGACAACACAGAAGGCATCAC...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp TTAAAAACTAACTCTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCCCTGATGTCCTCAAGTaGTTTCAATGCCTGGGTAGC +
Preference number: 5 (lower is better)
Translates to: LKTNSEPGRQSILRHRIAPDVLK*FQCLGS
Trigger: GCTACCCAGGCATTGAAACAACTTGAGGACATCAGG...GGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAGAGTTAGTTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS TCA 90 bp CCTCTCAGGTGTCTGGTAAACTGGGCATTCAAAAGCATAGAGTTCTaGATCTGTCTGGTTGGAAGCATTTGGTGTTTTGGTAGAAATCTT +
Preference number: 5 (lower is better)
Translates to: PLRCLVNWAFKSIEF*ICLVGSIWCFGRNL
Trigger: AAGATTTCTACCAAAACACCAAATGCTTCCAACCAGACAGATTCAGAACTCTATGCTTTTGAATGCCCAGTTTACCAGACACCTGAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000428003.2
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000682510.1
CDS GCA 90 bp GCTTGGGAATGGATTCTCATTTGGAGGCTCTATTGGGAAAAGATCTaGTTCCAAGCTCCCTCAGGTTGTAAGAAGAATTCATTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: AWEWILIWRLYWEKI*FQAPSGCKKNSFLC
Trigger: ACAAAGAAATGAATTCTTCTTACAACCTGAGGGAGCTTGGAAGCAGATCTTTTCCCAATAGAGCCTCCAAATGAGAATCCATTCCCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498360.5
CDS-3UTR CAA 90 bp CTCTTGTGCAAATCTCAGGAGGATATTGGTAAGGTCGATCCCATGAGTTTGAATGGATTTGGACACATGTaGGGGCAAGTTTTTCTTTCA +
Preference number: 5 (lower is better)
Translates to: LLCKSQEDIGKVDPMSLNGFGHM*GQVFLS
Trigger: TGAAAGAAAAACTTGCCCCAACATGTGTCCAAATCC...ATTCAAACTCATGGGATCGACCTTACCAATATCCTCCTGAGATTTGCACAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp GACAAATCTCATATACCGACGCTGTATTGCAGTATAAGCCACTTTGGCCCAAGTGCTCTCCTGACTATGTaGAGTTTCTTTGGCATAAAT +
Preference number: 5 (lower is better)
Translates to: DKSHIPTLYCSISHFGPSALLTM*SFFGIN
Trigger: ATTTATGCCAAAGAAACTCAACATAGTCAGGAGAGC...ACTTGGGCCAAAGTGGCTTATACTGCAATACAGCGTCGGTATATGAGATTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp CTCCTGACTATGTTGAGTTTCTTTGGCATAAATACGGAGAACTTCTCATCCTTGTCATTATCAGGTAGATaGGGATCTTCTAGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: LLTMLSFFGINTENFSSLSLSGR*GSSRGQ
Trigger: CTGCCCTCTAGAAGATCCCAATCTACCTGATAATGA...CAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS TCA 90 bp TCCATTTATATTGCAAATGTCACAGTAAGTACCACTTGTCCTGGATaGGATAACACCCATTGGGAAAACATCTGGCAGTTCCAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SIYIANVTVSTTCPG*DNTHWENIWQFQSS
Trigger: TGAAGACTGGAACTGCCAGATGTTTTCCCAATGGGTGTTATCTCATCCAGGACAAGTGGTACTTACTGTGACATTTGCAATATAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495456.1
CDS GCA 90 bp ATCCCTCTTTGTTTGCATCTCTTCCTCTCGTGCCCTCAAAATGTGTaGAAATGTTTCCATAAATTGCAAGTAGCTATTGGGAGTGGTATA +
Preference number: 5 (lower is better)
Translates to: IPLCLHLFLSCPQNV*KCFHKLQVAIGSGI
Trigger: TATACCACTCCCAATAGCTACTTGCAATTTATGGAAACATTTGCACACATTTTGAGGGCACGAGAGGAAGAGATGCAAACAAAGAGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS GCA 90 bp GTTTCTGAAAGAAGTAACTTTGCCGTTGCCCAGTTAGGTTTCTTTTaGAGAAGAATACACACTGCATTCATGACAGTCAGTACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: VSERSNFAVAQLGFF*RRIHTAFMTVSTRK
Trigger: CTTCCTTGTACTGACTGTCATGAATGCAGTGTGTATTCTTCTGCAAAAGAAACCTAACTGGGCAACGGCAAAGTTACTTCTTTCAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS-3UTR CAA 90 bp CTCCTGACTATGTTGAGTTTCTTTGGCATAAATACGGAGAACTTCTCATCCTTGGAATCCTCAGGGTGTTaGCATTTTTGGCTAGTTGAT +
Preference number: 5 (lower is better)
Translates to: LLTMLSFFGINTENFSSLESSGC*HFWLVD
Trigger: ATCAACTAGCCAAAAATGCAAACACCCTGAGGATTC...CAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp GTTAATAGCAAAAATGAGTACATGTACTCTGCCACAAGGAGAATTTTCAAACTCCCTGATGTCCTCAAGTaGTTTCAATGCCTGGGTAGC +
Preference number: 5 (lower is better)
Translates to: VNSKNEYMYSATRRIFKLPDVLK*FQCLGS
Trigger: GCTACCCAGGCATTGAAACAACTTGAGGACATCAGG...GAGTTTGAAAATTCTCCTTGTGGCAGAGTACATGTACTCATTTTTGCTATTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS GCA 90 bp AAATGCTCCAGAAATTCTTCTATTTCAGTGGGATCACATTCCAGCTaGTGCAATGATGATTCCACAACAACGTTGAAAATACCAATACGC +
Preference number: 5 (lower is better)
Translates to: KCSRNSSISVGSHSS*CNDDSTTTLKIPIR
Trigger: GCGTATTGGTATTTTCAACGTTGTTGTGGAATCATCATTGCAGCAGCTGGAATGTGATCCCACTGAAATAGAAGAATTTCTGGAGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS GCA 90 bp GTTGTAAGAAGAATTCATTTCTTTGTGATTGGAATCATAGCAGCTTaGTTCTTCGAAGCCAGCAAAGGGGAGAGACTCTGTTCTATCATA +
Preference number: 5 (lower is better)
Translates to: VVRRIHFFVIGIIAA*FFEASKGERLCSII
Trigger: TATGATAGAACAGAGTCTCTCCCCTTTGCTGGCTTCGAAGAAGCAAGCTGCTATGATTCCAATCACAAAGAAATGAATTCTTCTTACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498360.5
CDS CCA 90 bp GTTCTTCAAGAGTTATGGCATCAAGGGAAATACTCTCCAGTAACTTaGAACGTTGATCTTCTAAATGAGGAACTTCATGAGTTACCACAG +
Preference number: 5 (lower is better)
Translates to: VLQELWHQGKYSPVT*NVDLLNEELHELPQ
Trigger: CTGTGGTAACTCATGAAGTTCCTCATTTAGAAGATCAACGTTCCAAGTTACTGGAGAGTATTTCCCTTGATGCCATAACTCTTGAAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS-3UTR CAA 90 bp CGTTTAATTTCTTGCTTCAAAAAGGTTAGCAAGACACAATGGATAAGGGGGTCGTATCTGAACTTCCAGTaGCTGTCTTATGAGTTTCAG +
Preference number: 5 (lower is better)
Translates to: RLISCFKKVSKTQWIRGSYLNFQ*LSYEFQ
Trigger: CTGAAACTCATAAGACAGCAACTGGAAGTTCAGATA...CGACCCCCTTATCCATTGTGTCTTGCTAACCTTTTTGAAGCAAGAAATTAAACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp GTCTATAAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCTTAAGAATCATCTCCTaGGTTTTGGCAGCTGTTACA +
Preference number: 5 (lower is better)
Translates to: VYKRTRHHHHQFRSTACVLRIIS*VLAAVT
Trigger: TGTAACAGCTGCCAAAACCAAGGAGATGATTCTTAA...GACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTTATAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTGAATCCGGTTGTTTTTaGGTGCTCCAAGAGTATCTT +
Preference number: 5 (lower is better)
Translates to: NKQLDKPPVENTSEPELSESGCF*VLQEYL
Trigger: AAGATACTCTTGGAGCACCAAAAAACAACCGGATTC...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp CGTTTAATTTCTTGCTTCAAAAAGGTTAGCAAGACACAATGGATAAGGGGGTCGAGACAAGAGTTGATCTaGCAAACCTTGGAATGTTAC +
Preference number: 5 (lower is better)
Translates to: RLISCFKKVSKTQWIRGSRQELI*QTLECY
Trigger: GTAACATTCCAAGGTTTGCAAGATCAACTCTTGTCT...CGACCCCCTTATCCATTGTGTCTTGCTAACCTTTTTGAAGCAAGAAATTAAACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp TCTCGATATTTCCAACAGCCAGAGCAGTTTTGGACCCATATTTTAAATAAACAGGTCGATCCCATGAGTTaGAATAAGTATCAGCGGAGT +
Preference number: 5 (lower is better)
Translates to: SRYFQQPEQFWTHILNKQVDPMS*NKYQRS
Trigger: ACTCCGCTGATACTTATTCAAACTCATGGGATCGAC...CTGTTTATTTAAAATATGGGTCCAAAACTGCTCTGGCTGTTGGAAATATCGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp AACTCTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACTGCAGTGTTCATAAGTaGACGAATGAGTTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: NSEPGRQSILRHRIARYNCSVHK*TNEFLK
Trigger: TTTCAGGAACTCATTCGTCAACTTATGAACACTGCA...GTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS GCA 90 bp CAAACTAGCTTCTCTTATAGCCTCGATAACAATCAAGGTTTCATCTaGTTCAGAAAGACTGTCACTGGTATCACATTTAAACTCCCGTTT +
Preference number: 5 (lower is better)
Translates to: QTSFSYSLDNNQGFI*FRKTVTGITFKLPF
Trigger: AAACGGGAGTTTAAATGTGATACCAGTGACAGTCTTTCTGAAGCAGATGAAACCTTGATTGTTATCGAGGCTATAAGAGAAGCTAGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445597.6
ENST00000682510.1
CDS-3UTR CAA 90 bp AAATCCTCAAAACAGTTGAAGACCACACAATGTTTGCCTAAGGATTTTGCTAGAAAAGCTGGCATTTCCTaGAGACACATAGCACAACTT +
Preference number: 5 (lower is better)
Translates to: KSSKQLKTTQCLPKDFARKAGIS*RHIAQL
Trigger: AAGTTGTGCTATGTGTCTCAAGGAAATGCCAGCTTT...TCTAGCAAAATCCTTAGGCAAACATTGTGTGGTCTTCAACTGTTTTGAGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495456.1
CDS-3UTR CAA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTATTCATCAGGTTTTCTaGGGTCCACTGAATCTGAAA +
Preference number: 5 (lower is better)
Translates to: NKQLDKPPVENTSEPELSIHQVF*GPLNLK
Trigger: TTTCAGATTCAGTGGACCCAAGAAAACCTGATGAAT...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp GTCTATAAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCAAAGCTCCAAAGAAATaGAACCCAACTTCATTTGGA +
Preference number: 5 (lower is better)
Translates to: VYKRTRHHHHQFRSTACVKAPKK*NPTSFG
Trigger: TCCAAATGAAGTTGGGTTCAATTTCTTTGGAGCTTT...GACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTTATAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp GTCTATAAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCTCAGGTATGCTGTCCTaGTCAAGGTTAATCAATTTT +
Preference number: 5 (lower is better)
Translates to: VYKRTRHHHHQFRSTACVSGMLS*SRLINF
Trigger: AAAATTGATTAACCTTGACAAGGACAGCATACCTGA...GACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTTATAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTCCCATTGTGATACGTTaGATAAAAGGGATTTGCACA +
Preference number: 5 (lower is better)
Translates to: NKQLDKPPVENTSEPELSPIVIR*IKGICT
Trigger: TGTGCAAATCCCTTTTATCAAACGTATCACAATGGG...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp CTCCTGACTATGTTGAGTTTCTTTGGCATAAATACGGAGAACTTCTCATCCTTGAAGAACTGTATGATTTaGAGCTTAACCATAGCCGAA +
Preference number: 5 (lower is better)
Translates to: LLTMLSFFGINTENFSSLKNCMI*SLTIAE
Trigger: TTCGGCTATGGTTAAGCTCAAAATCATACAGTTCTT...CAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp GTCTATAAAAGGACACGCCACCATCATCATCAATTTAGATCAACTGCATGTGTCGCATTTGTTCTAGTGTaGTCCTTTCCTAACAATCTT +
Preference number: 5 (lower is better)
Translates to: VYKRTRHHHHQFRSTACVAFVLV*SFPNNL
Trigger: AAGATTGTTAGGAAAGGACAACACTAGAACAAATGC...GACACATGCAGTTGATCTAAATTGATGATGATGGTGGCGTGTCCTTTTATAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp AACTCTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACTCACATCATCATCTTTaGGTTCTGTTCTATCATAGG +
Preference number: 5 (lower is better)
Translates to: NSEPGRQSILRHRIARYNSHHHL*VLFYHR
Trigger: CCTATGATAGAACAGAACCAAAAGATGATGATGTGA...GTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR CAA 90 bp AACTCTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACATAAACCAAACAGGTTaGAAACAAGTCATCAGCCAA +
Preference number: 5 (lower is better)
Translates to: NSEPGRQSILRHRIARYNINQTG*KQVISQ
Trigger: TTGGCTGATGACTTGTTTCAAACCTGTTTGGTTTAT...GTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR CAA 90 bp TTAAAAACTAACTCTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCTGCAGTGTTCATAAGTaGACGAATGAGTTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: LKTNSEPGRQSILRHRIACSVHK*TNEFLK
Trigger: TTTCAGGAACTCATTCGTCAACTTATGAACACTGCA...GGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAGAGTTAGTTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS CCA 90 bp TATATTTTGGTAGGCAGGATCTGTTTCAAAAAGGATGTGACAATCTaGCCATCTGGTCTGCTCTTTATAATGTATTATGCTTCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: YILVGRICFKKDVTI*PSGLLFIMYYASCL
Trigger: AAGACAGGAAGCATAATACATTATAAAGAGCAGACCAGATGGCCAGATTGTCACATCCTTTTTGAAACAGATCCTGCCTACCAAAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000682510.1
CDS CCA 90 bp TTTTCATCCCTCTTTTCTATATCCTTGAATGTGACAGACTCTCTTTaGGAATTTGCCTCCTTAGATGACGTGTCATTCAAATCATCACTT +
Preference number: 5 (lower is better)
Translates to: FSSLFSISLNVTDSL*EFASLDDVSFKSSL
Trigger: AAGTGATGATTTGAATGACACGTCATCTAAGGAGGCAAATTCCCAAAGAGAGTCTGTCACATTCAAGGATATAGAAAAGAGGGATGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000682510.1
CDS-3UTR CAA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTTTGATCTTGCAAACCTaGGAATGTTACAGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: NKQLDKPPVENTSEPELSLILQT*ECYSEV
Trigger: AACTTCACTGTAACATTCCAAGGTTTGCAAGATCAA...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp TCTCGATATTTCCAACAGCCAGAGCAGTTTTGGACCCATATTTTAAATAAACAGTGGTCACATGATGTGTaGTTCCTTTTAACTCTTGTG +
Preference number: 5 (lower is better)
Translates to: SRYFQQPEQFWTHILNKQWSHDV*FLLTLV
Trigger: CACAAGAGTTAAAAGGAACAACACATCATGTGACCA...CTGTTTATTTAAAATATGGGTCCAAAACTGCTCTGGCTGTTGGAAATATCGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTGTGGAAGCTGGTTGTTaGTATAAAGCAGAAATAAGT +
Preference number: 5 (lower is better)
Translates to: NKQLDKPPVENTSEPELSVEAGC*YKAEIS
Trigger: ACTTATTTCTGCTTTATACAAACAACCAGCTTCCAC...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp AATAAACAGTTGGATAAACCTCCAGTCGAAAACACATCTGAACCTGAGCTTTCTCACTTCCATTTATACTaGTGTAACTTGGTCATAGCT +
Preference number: 5 (lower is better)
Translates to: NKQLDKPPVENTSEPELSHFHLY*CNLVIA
Trigger: AGCTATGACCAAGTTACACAAGTATAAATGGAAGTG...AGAAAGCTCAGGTTCAGATGTGTTTTCGACTGGAGGTTTATCCAACTGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327794.10
CDS-3UTR CAA 90 bp TTAAAAACTAACTCTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCTCACATCATCATCTTTaGGTTCTGTTCTATCATAGG +
Preference number: 5 (lower is better)
Translates to: LKTNSEPGRQSILRHRIASHHHL*VLFYHR
Trigger: CCTATGATAGAACAGAACCAAAAGATGATGATGTGA...GGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAGAGTTAGTTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR CAA 90 bp CTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACAAATATAAACCAAACAGGTTaGAAACAAGTCATCAGCCAA +
Preference number: 5 (lower is better)
Translates to: LNLEDRVYLGTELPDITNINQTG*KQVISQ
Trigger: TTGGCTGATGACTTGTTTCAAACCTGTTTGGTTTAT...ATTTGTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS-3UTR CAA 90 bp CTGAACCTGGAAGACAGAGTATACTTAGGCACAGAATTGCCAGATATAACAAATCTATATTTAGGCAGCTaGAAATGTGTTGTGTCATCT +
Preference number: 5 (lower is better)
Translates to: LNLEDRVYLGTELPDITNLYLGS*KCVVSS
Trigger: AGATGACACAACACATTTCAAGCTGCCTAAATATAG...ATTTGTTATATCTGGCAATTCTGTGCCTAAGTATACTCTGTCTTCCAGGTTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366849.5
ENST00000400952.7
CDS GCA 90 bp ATTGGCAGTTTTCTGAGCATAATCTTCCACAATTCTTACTTCTTCTaGCACAATTTCTTCATCCTGTTTAACAAGCATCTGAACTTTCTC +
Preference number: 5 (lower is better)
Translates to: IGSFLSIIFHNSYFF*HNFFILFNKHLNFL
Trigger: GAGAAAGTTCAGATGCTTGTTAAACAGGATGAAGAAATTGTGGCAGAAGAAGTAAGAATTGTGGAAGATTATGCTCAGAAAACTGCCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS CCA 90 bp TCCATTATTGAAACCAAATCAATGAAGATAGACAGCTGGGGATCTTaGCAAAGAGGAGTAATTGTGGCTGAAATAATATCTTCAAGATTG +
Preference number: 5 (lower is better)
Translates to: SIIETKSMKIDSWGS*QRGVIVAEIISSRL
Trigger: CAATCTTGAAGATATTATTTCAGCCACAATTACTCCTCTTTGCCAAGATCCCCAGCTGTCTATCTTCATTGATTTGGTTTCAATAATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS GCA 90 bp AAATGCTCCAGAAATTCTTCTATTTCAGTGGGATCACATTCCAGCTaGTGCAATGATGATTCCACAACTTCCAATAAATTTTTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: KCSRNSSISVGSHSS*CNDDSTTSNKFLFF
Trigger: AAAGAACAAAAATTTATTGGAAGTTGTGGAATCATCATTGCAGCAGCTGGAATGTGATCCCACTGAAATAGAAGAATTTCTGGAGCATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000682510.1
CDS GCA 90 bp AGAGCTATAATGATAGGCAGCTCTTGTTTAAACTCTGTTACCACTTaGTTAAGATGTGTTACCATATCGCTTTTAGGTAAACCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: RAIMIGSSCLNSVTT*LRCVTISLLGKPFS
Trigger: AGAAAAAGGTTTACCTAAAAGCGATATGGTAACACATCTTAAGCAAGTGGTAACAGAGTTTAAACAAGAGCTGCCTATCATTATAGCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000682510.1
CDS CCA 90 bp TTAGGTAAATCCATTATTGAAACCAAATCAATGAAGATAGACAGCTaGGGATCTTGGCAAAGAGGAGTAATTGTGGTTATACATTTTTCC +
Preference number: 5 (lower is better)
Translates to: LGKSIIETKSMKIDS*GSWQRGVIVVIHFS
Trigger: GGAAAAATGTATAACCACAATTACTCCTCTTTGCCAAGATCCCCAGCTGTCTATCTTCATTGATTTGGTTTCAATAATGGATTTACCTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000682510.1
CDS CCA 90 bp TTAGGTAAATCCATTATTGAAACCAAATCAATGAAGATAGACAGCTaGGGATCTTGGCAAAGAGGAGTAATTGTGGCTGAAATAATATCT +
Preference number: 5 (lower is better)
Translates to: LGKSIIETKSMKIDS*GSWQRGVIVAEIIS
Trigger: AGATATTATTTCAGCCACAATTACTCCTCTTTGCCAAGATCCCCAGCTGTCTATCTTCATTGATTTGGTTTCAATAATGGATTTACCTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS CCA 72 bp GCCGCGCCGTGGTCCGACGGCCGTTGTGGCCCTTCCTaGAAGCGGCGAAGGTCCGGCCCGCCCACGCCGGCG +
Preference number: 6 (lower is better)
Translates to: AAPWSDGRCGPS*KRRRSGPPTPA
Trigger: CGCCGGCGTGGGCGGGCCGGACCTTCGCCGCTTCCAGGAAGGGCCACAACGGCCGTCGGACCACGGCGCGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366849.5
ENST00000366850.7
ENST00000400952.7
ENST00000430092.5
ENST00000445597.6
ENST00000498360.5
ENST00000682510.1
CDS CCA 72 bp GGAACTGGCCGCCGCGCCGTGGTCCGACGGCCGTTGTaGCCCTTCCTGGAAGCGGCGAAGGTCCGGCCCGCC +
Preference number: 6 (lower is better)
Translates to: GTGRRAVVRRPL*PFLEAAKVRPA
Trigger: GGCGGGCCGGACCTTCGCCGCTTCCAGGAAGGGCCACAACGGCCGTCGGACCACGGCGCGGCGGCCAGTTCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366849.5
ENST00000366850.7
ENST00000400952.7
ENST00000430092.5
ENST00000498360.5
ENST00000682510.1
CDS TCA 72 bp CACGCCAGGCTCCGACGCCTCCTGGCCGTAACCGCCTaGCCAAGAGCCACGCCTGCGCCCTGGCGAAGAGGC +
Preference number: 6 (lower is better)
Translates to: HARLRRLLAVTA*PRATPAPWRRG
Trigger: GCCTCTTCGCCAGGGCGCAGGCGTGGCTCTTGGTCAGGCGGTTACGGCCAGGAGGCGTCGGAGCCTGGCGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS CCA 72 bp CACGCCTGCGCCCTGGCGAAGAGGCCACAATGGGGGTaGGGTCCCGAACGCGGCGCAAGGGATCCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: HACALAKRPQWG*GPERGARDPGC
Trigger: GCACCCAGGATCCCTTGCGCCGCGTTCGGGACCCCACCCCCATTGTGGCCTCTTCGCCAGGGCGCAGGCGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS CAA 72 bp AAAGGAACTGGCCGCCGCGCCGTGGTCCGACGGCCGTaGTGGCCCTTCCTGGAAGCGGCGAAGGTCCGGCCC +
Preference number: 6 (lower is better)
Translates to: KGTGRRAVVRRP*WPFLEAAKVRP
Trigger: GGGCCGGACCTTCGCCGCTTCCAGGAAGGGCCACAACGGCCGTCGGACCACGGCGCGGCGGCCAGTTCCTTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366849.5
ENST00000366850.7
ENST00000400952.7
ENST00000430092.5
ENST00000498360.5
ENST00000682510.1
CDS CCA 72 bp ATGTTTTTCCGCCGCGCCGTGGTCCGACGGCCGTTGTaGCCCTTCCTGGAAGCGGCGAAGGTCCGGCCCGCC +
Preference number: 6 (lower is better)
Translates to: MFFRRAVVRRPL*PFLEAAKVRPA
Trigger: GGCGGGCCGGACCTTCGCCGCTTCCAGGAAGGGCCACAACGGCCGTCGGACCACGGCGCGGCGGAAAAACAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS CAA 90 bp CAAAACTATAAAGGAACTGGCCGCCGCGCCGTGGTCCGACGGCCGTaGTGGCCCTTCCTGGAAGCGGCGAAGGTCCGGCCCGCCCACGCC +
Preference number: 6 (lower is better)
Translates to: QNYKGTGRRAVVRRP*WPFLEAAKVRPAHA
Trigger: GGCGTGGGCGGGCCGGACCTTCGCCGCTTCCAGGAAGGGCCACAACGGCCGTCGGACCACGGCGCGGCGGCCAGTTCCTTTATAGTTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366849.5
ENST00000366850.7
ENST00000400952.7
ENST00000430092.5
ENST00000498360.5
ENST00000682510.1
CDS CAA 90 bp AAACGTCTCCATATGTTTTTCCGCCGCGCCGTGGTCCGACGGCCGTaGTGGCCCTTCCTGGAAGCGGCGAAGGTCCGGCCCGCCCACGCC +
Preference number: 6 (lower is better)
Translates to: KRLHMFFRRAVVRRP*WPFLEAAKVRPAHA
Trigger: GGCGTGGGCGGGCCGGACCTTCGCCGCTTCCAGGAAGGGCCACAACGGCCGTCGGACCACGGCGCGGCGGAAAAACATATGGAGACGTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS CAA 72 bp CATATGTTTTTCCGCCGCGCCGTGGTCCGACGGCCGTaGTGGCCCTTCCTGGAAGCGGCGAAGGTCCGGCCC +
Preference number: 6 (lower is better)
Translates to: HMFFRRAVVRRP*WPFLEAAKVRP
Trigger: GGGCCGGACCTTCGCCGCTTCCAGGAAGGGCCACAACGGCCGTCGGACCACGGCGCGGCGGAAAAACATATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS TCA 72 bp CGAGATTCCACCGCGGGTACGCGGCGGCCCCCGATGTaGCACCGACGGTGCCAGTCAGAGACTGCAACTCCT +
Preference number: 6 (lower is better)
Translates to: RDSTAGTRRPPM*HRRCQSETATP
Trigger: AGGAGTTGCAGTCTCTGACTGGCACCGTCGGTGTCACATCGGGGGCCGCCGCGTACCCGCGGTGGAATCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS TCA 72 bp GCCATGGCTTCGGCCGGTCCCTCCGTTCGGGGTCCCTaGCTTCCGGAAATCAGAAAATATCTTGAATTGCCG +
Preference number: 6 (lower is better)
Translates to: AMASAGPSVRGP*LPEIRKYLELP
Trigger: CGGCAATTCAAGATATTTTCTGATTTCCGGAAGTCAGGGACCCCGAACGGAGGGACCGGCCGAAGCCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453375.1
CDS CCA 72 bp AGCTACACACGTCAGTGTGCCTGTCACAAGCAGTGCTaGTCAGCCATTGGCCTCTCCCTACAGGACCAAGGT +
Preference number: 6 (lower is better)
Translates to: SYTRQCACHKQC*SAIGLSLQDQG
Trigger: ACCTTGGTCCTGTAGGGAGAGGCCAATGGCTGACCAGCACTGCTTGTGACAGGCACACTGACGTGTGTAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS TCA 72 bp GACACCGACGGTGCCAGTCAGAGACTGCAACTCCTGTaGTGCCACAGAACCAACAGCATCCAGCAGAGGAAA +
Preference number: 6 (lower is better)
Translates to: DTDGASQRLQLL*CHRTNSIQQRK
Trigger: TTTCCTCTGCTGGATGCTGTTGGTTCTGTGGCATCACAGGAGTTGCAGTCTCTGACTGGCACCGTCGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS CCA 72 bp TCAGTGTGCCTGTCACAAGCAGTGCTGGTCAGCCATTaGCCTCTCCCTACAGGACCAAGGTCTGTTCCTGTA +
Preference number: 6 (lower is better)
Translates to: SVCLSQAVLVSH*PLPTGPRSVPV
Trigger: TACAGGAACAGACCTTGGTCCTGTAGGGAGAGGCCAATGGCTGACCAGCACTGCTTGTGACAGGCACACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS CAA 72 bp CCTGGATCCTTCCATCTGACGGATCCATTTGTGAGCTaGCCTATGTGGGTCAATCAGCAGTGGCCACTGCTG +
Preference number: 6 (lower is better)
Translates to: PGSFHLTDPFVS*PMWVNQQWPLL
Trigger: CAGCAGTGGCCACTGCTGATTGACCCACATAGGCAAGCTCACAAATGGATCCGTCAGATGGAAGGATCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS CAA 90 bp GCTACACACGTCAGTGTGCCTGTCACAAGCAGTGCTGGTCAGCCATaGGCCTCTCCCTACAGGACCAAGGTCTGTTCCTGTATGGTTTAT +
Preference number: 6 (lower is better)
Translates to: ATHVSVPVTSSAGQP*ASPYRTKVCSCMVY
Trigger: ATAAACCATACAGGAACAGACCTTGGTCCTGTAGGGAGAGGCCAATGGCTGACCAGCACTGCTTGTGACAGGCACACTGACGTGTGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS CCA 72 bp TTCCATCTGACGGATCCATTTGTGAGCTTGCCTATGTaGGTCAATCAGCAGTGGCCACTGCTGGCCATTCTT +
Preference number: 6 (lower is better)
Translates to: FHLTDPFVSLPM*VNQQWPLLAIL
Trigger: AAGAATGGCCAGCAGTGGCCACTGCTGATTGACCCACATAGGCAAGCTCACAAATGGATCCGTCAGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS CAA 90 bp TCCAGCAGAGGAAAGGGTGCATTACATCTTATGAGGCATTCTATCTaGGAAGCAATGCAGCCACATCCCAGAGCACGAGCCAGTCCTATG +
Preference number: 6 (lower is better)
Translates to: SSRGKGALHLMRHSI*EAMQPHPRARASPM
Trigger: CATAGGACTGGCTCGTGCTCTGGGATGTGGCTGCATTGCTTCCAAGATAGAATGCCTCATAAGATGTAATGCACCCTTTCCTCTGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS GCA 72 bp ACTGACTTCCCAATAATCTCCTGGAGAGCCTCCCAATaGCTTGGCTTGAGACAGGGATTTCCCAGAGCTATA +
Preference number: 6 (lower is better)
Translates to: TDFPIISWRASQ*LGLRQGFPRAI
Trigger: TATAGCTCTGGGAAATCCCTGTCTCAAGCCAAGGCATTGGGAGGCTCTCCAGGAGATTATTGGGAAGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000682510.1
CDS CCA 72 bp CCATTTGTGAGCTTGCCTATGTGGGTCAATCAGCAGTaGCCACTGCTGGCCATTCTTGATCAAGATGGCATT +
Preference number: 6 (lower is better)
Translates to: PFVSLPMWVNQQ*PLLAILDQDGI
Trigger: AATGCCATCTTGATCAAGAATGGCCAGCAGTGGCCACTGCTGATTGACCCACATAGGCAAGCTCACAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS CCA 72 bp CTACTAGGAAGTAGAGCAGGGCGCCTCGGGTCGCAATaGGGAGATAGTTTTTACGTATTGCTTGGATTTCAC +
Preference number: 6 (lower is better)
Translates to: LLGSRAGRLGSQ*GDSFYVLLGFH
Trigger: GTGAAATCCAAGCAATACGTAAAAACTATCTCCCCATTGCGACCCGAGGCGCCCTGCTCTACTTCCTAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS CAA 72 bp GGAAAGGGTGCATTACATCTTATGAGGCATTCTATCTaGGAAGCAATGCAGCCACATCCCAGAGCACGAGCC +
Preference number: 6 (lower is better)
Translates to: GKGALHLMRHSI*EAMQPHPRARA
Trigger: GGCTCGTGCTCTGGGATGTGGCTGCATTGCTTCCAAGATAGAATGCCTCATAAGATGTAATGCACCCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS TCA 72 bp TCATCTTCCAGGACAGTTAGTAAGACTGACGCACACTaGAAGCGCCTGCTGGCCATTGTTTTCCGATTTGCT +
Preference number: 6 (lower is better)
Translates to: SSSRTVSKTDAH*KRLLAIVFRFA
Trigger: AGCAAATCGGAAAACAATGGCCAGCAGGCGCTTTCAGTGTGCGTCAGTCTTACTAACTGTCCTGGAAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000638635.1
ENST00000682510.1
CDS TCA 72 bp GTGGGTCAATCAGCAGTGGCCACTGCTGGCCATTCTTaGTCAAGATGGCATTCTCTACTGAATACTGACCAT +
Preference number: 6 (lower is better)
Translates to: VGQSAVATAGHS*SRWHSLLNTDH
Trigger: ATGGTCAGTATTCAGTAGAGAATGCCATCTTGATCAAGAATGGCCAGCAGTGGCCACTGCTGATTGACCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS GCA 72 bp TCATTTAAAGCAAAACTGAAGCTACACACGTCAGTGTaGCTGTCACAAGCAGTGCTGGTCAGCCATTGGCCT +
Preference number: 6 (lower is better)
Translates to: SFKAKLKLHTSV*LSQAVLVSHWP
Trigger: AGGCCAATGGCTGACCAGCACTGCTTGTGACAGGCACACTGACGTGTGTAGCTTCAGTTTTGCTTTAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS CAA 90 bp TCAGCGACATCAGCTTTATCCAGGGCATTCAGAGCCACAATTGCCTaGTCAAAGGCTGGCAGCACACTTTTTAGTTCATTGGCAGTTTTC +
Preference number: 6 (lower is better)
Translates to: SATSALSRAFRATIA*SKAGSTLFSSLAVF
Trigger: GAAAACTGCCAATGAACTAAAAAGTGTGCTGCCAGCCTTTGACAAGGCAATTGTGGCTCTGAATGCCCTGGATAAAGCTGATGTCGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS TCA 72 bp CTGCTGGCCATTCTTGATCAAGATGGCATTCTCTACTaGATACTGACCATGAGGCAGTCCCTGATTATGCCA +
Preference number: 6 (lower is better)
Translates to: LLAILDQDGILY*ILTMRQSLIMP
Trigger: TGGCATAATCAGGGACTGCCTCATGGTCAGTATTCAGTAGAGAATGCCATCTTGATCAAGAATGGCCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS TCA 72 bp AAAAGGGATTTGCACAGAAGTGAAAATGGTTCCAGGTaGGTGCTGACATATTGGCACTGCCTCCACCTGGAA +
Preference number: 6 (lower is better)
Translates to: KRDLHRSENGSR*VLTYWHCLHLE
Trigger: TTCCAGGTGGAGGCAGTGCCAATATGTCAGCACTCACCTGGAACCATTTTCACTTCTGTGCAAATCCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS TCA 72 bp ACCATGGCACATCGGCTGACAGTAGCAGGACTGGCCTaGGAGAGATTGTCCACTTCAAAAATCACTCTTATT +
Preference number: 6 (lower is better)
Translates to: TMAHRLTVAGLA*ERLSTSKITLI
Trigger: AATAAGAGTGATTTTTGAAGTGGACAATCTCTCTCAGGCCAGTCCTGCTACTGTCAGCCGATGTGCCATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000682510.1
CDS GCA 72 bp TGCCACAGAACCAACAGCATCCAGCAGAGGAAAGGGTaGATTACATCTTATGAGGCATTCTATCTTGGAAGC +
Preference number: 6 (lower is better)
Translates to: CHRTNSIQQRKG*ITSYEAFYLGS
Trigger: GCTTCCAAGATAGAATGCCTCATAAGATGTAATGCACCCTTTCCTCTGCTGGATGCTGTTGGTTCTGTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS CCA 72 bp TCCCTACAGGACCAAGGTCTGTTCCTGTATGGTTTATaGCACGGAGAAGCAGGCAGAAAGTATGTTTTTCCT +
Preference number: 6 (lower is better)
Translates to: SLQDQGLFLYGL*HGEAGRKYVFP
Trigger: AGGAAAAACATACTTTCTGCCTGCTTCTCCGTGCCATAAACCATACAGGAACAGACCTTGGTCCTGTAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS CAA 72 bp TGTTGCTTGGGAATGGATTCTCATTTGGAGGCTCTATaGGGAAAAGATCTGCTTCCAAGCTCCCTCAGGTTG +
Preference number: 6 (lower is better)
Translates to: CCLGMDSHLEAL*GKDLLPSSLRL
Trigger: CAACCTGAGGGAGCTTGGAAGCAGATCTTTTCCCAATAGAGCCTCCAAATGAGAATCCATTCCCAAGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498360.5
CDS CAA 90 bp AGACTGACGCACACTGAAAGCGCCTGCTGGCCATTGTTTTCCGATTaGCTAATAGTTGTTTTTCAGCAACGGTATCTTTGTAAGCTGCCT +
Preference number: 6 (lower is better)
Translates to: RLTHTESACWPLFSD*LIVVFQQRYLCKLP
Trigger: AGGCAGCTTACAAAGATACCGTTGCTGAAAAACAACTATTAGCAAATCGGAAAACAATGGCCAGCAGGCGCTTTCAGTGTGCGTCAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000638635.1
ENST00000682510.1
CDS TCA 72 bp ATGATCTGGCTCACAGTAAGTACCACTTGTCCTGGATaGGATAACACCCATTGGGAAAACATCTGGCAGTTC +
Preference number: 6 (lower is better)
Translates to: MIWLTVSTTCPG*DNTHWENIWQF
Trigger: GAACTGCCAGATGTTTTCCCAATGGGTGTTATCTCATCCAGGACAAGTGGTACTTACTGTGAGCCAGATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328556.9
ENST00000682510.1
CDS TCA 72 bp GTATCCAGCACTACCAGGTCTGCAACCTCTTCTAGATaGCACATCAGACCAGCGTGGACTTTTTCCAATTTT +
Preference number: 6 (lower is better)
Translates to: VSSTTRSATSSR*HIRPAWTFSNF
Trigger: AAAATTGGAAAAAGTCCACGCTGGTCTGATGTGTCATCTAGAAGAGGTTGCAGACCTGGTAGTGCTGGATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000328556.9
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000682510.1
CDS GCA 72 bp GGACAGTTAGTAAGACTGACGCACACTGAAAGCGCCTaGTGGCCATTGTTTTCCGATTTGCTAATAGTTGTT +
Preference number: 6 (lower is better)
Translates to: GQLVRLTHTESA*WPLFSDLLIVV
Trigger: AACAACTATTAGCAAATCGGAAAACAATGGCCAGCAGGCGCTTTCAGTGTGCGTCAGTCTTACTAACTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000638635.1
ENST00000682510.1
CDS CAA 72 bp GCAGGAGCTAATCATAGAAGGATACACTCTACAATTTaGGCGGAAGCTAGGTCCTTCAGGACTCATGATCAC +
Preference number: 6 (lower is better)
Translates to: AGANHRRIHSTI*AEARSFRTHDH
Trigger: GTGATCATGAGTCCTGAAGGACCTAGCTTCCGCCAAAATTGTAGAGTGTATCCTTCTATGATTAGCTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS CAA 90 bp GGACAGTTAGTAAGACTGACGCACACTGAAAGCGCCTGCTGGCCATaGTTTTCCGATTTGCTAATAGTTGTTTTTCAGCAACGGTATCTT +
Preference number: 6 (lower is better)
Translates to: GQLVRLTHTESACWP*FSDLLIVVFQQRYL
Trigger: AAGATACCGTTGCTGAAAAACAACTATTAGCAAATCGGAAAACAATGGCCAGCAGGCGCTTTCAGTGTGCGTCAGTCTTACTAACTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000638635.1
ENST00000682510.1
CDS GCA 72 bp GCCATCTCTTTGGAGTTAACAACAGTCCTGTCAGCTTaGAGCAATCCTAGGAGAAGCTGGAAAATAGTACAT +
Preference number: 6 (lower is better)
Translates to: AISLELTTVLSA*SNPRRSWKIVH
Trigger: ATGTACTATTTTCCAGCTTCTCCTAGGATTGCTGCAAGCTGACAGGACTGTTGTTAACTCCAAAGAGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327794.10
ENST00000638635.1
CDS GCA 72 bp GCCATCTCTTTGGAGTTAACAACAGTCCTGTCAGCTTaGAGCAATCCTAGGAGAAGCTTAAACATATCTCGA +
Preference number: 6 (lower is better)
Translates to: AISLELTTVLSA*SNPRRSLNISR
Trigger: TCGAGATATGTTTAAGCTTCTCCTAGGATTGCTGCAAGCTGACAGGACTGTTGTTAACTCCAAAGAGATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000682510.1
CDS CCA 72 bp CAGGAGCTAATCATAGAAGGATACACTCTACAATTTTaGCGGAAGCTAGGTCCTTCAGGACTCATGATCACA +
Preference number: 6 (lower is better)
Translates to: QELIIEGYTLQF*RKLGPSGLMIT
Trigger: TGTGATCATGAGTCCTGAAGGACCTAGCTTCCGCCAAAATTGTAGAGTGTATCCTTCTATGATTAGCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS CCA 72 bp TGTAATCGAGGTGTTGCTTGGGAATGGATTCTCATTTaGAGGCTCTATTGGGAAAAGATCTGCTTCCAAGCT +
Preference number: 6 (lower is better)
Translates to: CNRGVAWEWILI*RLYWEKICFQA
Trigger: AGCTTGGAAGCAGATCTTTTCCCAATAGAGCCTCCAAATGAGAATCCATTCCCAAGCAACACCTCGATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498360.5
CDS CCA 72 bp AGTCTCAAAGGCTGTAATCGAGGTGTTGCTTGGGAATaGATTCTCATTTGGAGGCTCTATTGGGAAAAGATC +
Preference number: 6 (lower is better)
Translates to: SLKGCNRGVAWE*ILIWRLYWEKI
Trigger: GATCTTTTCCCAATAGAGCCTCCAAATGAGAATCCATTCCCAAGCAACACCTCGATTACAGCCTTTGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498360.5
CDS CAA 72 bp TCGCGCAATTTTAAGGACGTTTTGAGCTTCAGCTACTaGGATTTGTTTAGGGCCCACAACCTTCTGTACTTC +
Preference number: 6 (lower is better)
Translates to: SRNFKDVLSFSY*DLFRAHNLLYF
Trigger: GAAGTACAGAAGGTTGTGGGCCCTAAACAAATCCAAGTAGCTGAAGCTCAAAACGTCCTTAAAATTGCGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS CAA 72 bp GAGGAAGCTGAGCCCTTAAACGCTCTCCTGACTATGTaGAGTTTCTTTGGCATAAATACGGAGAACTTCTCA +
Preference number: 6 (lower is better)
Translates to: EEAEPLNALLTM*SFFGINTENFS
Trigger: TGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAGAGCGTTTAAGGGCTCAGCTTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428003.2
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000682510.1
CDS CAA 72 bp CCATTCCTCAAGGGTGTAAGAGAAGAGAGTCAAGTTTaGATCCCATTCATTCACAAGATCCTTAATGGGCCC +
Preference number: 6 (lower is better)
Translates to: PFLKGVREESQV*IPFIHKILNGP
Trigger: GGGCCCATTAAGGATCTTGTGAATGAATGGGATCAAAACTTGACTCTCTTCTCTTACACCCTTGAGGAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000682510.1
CDS CAA 72 bp CCTCTGCTTAAAGTCTCAAAGGCTGTAATCGAGGTGTaGCTTGGGAATGGATTCTCATTTGGAGGCTCTATT +
Preference number: 6 (lower is better)
Translates to: PLLKVSKAVIEV*LGNGFSFGGSI
Trigger: AATAGAGCCTCCAAATGAGAATCCATTCCCAAGCAACACCTCGATTACAGCCTTTGAGACTTTAAGCAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498360.5
CDS CAA 90 bp ACAATTCATCCATTCCTCAAGGGTGTAAGAGAAGAGAGTCAAGTTTaGATCCCATTCATTCACAAGATCCTTAATGGGCCCAATGTGGGG +
Preference number: 6 (lower is better)
Translates to: TIHPFLKGVREESQV*IPFIHKILNGPNVG
Trigger: CCCCACATTGGGCCCATTAAGGATCTTGTGAATGAATGGGATCAAAACTTGACTCTCTTCTCTTACACCCTTGAGGAATGGATGAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000682510.1
CDS CAA 90 bp TTAACGGATCCTCTGCTTAAAGTCTCAAAGGCTGTAATCGAGGTGTaGCTTGGGAATGGATTCTCATTTGGAGGCTCTATTGGGAAAAGA +
Preference number: 6 (lower is better)
Translates to: LTDPLLKVSKAVIEV*LGNGFSFGGSIGKR
Trigger: TCTTTTCCCAATAGAGCCTCCAAATGAGAATCCATTCCCAAGCAACACCTCGATTACAGCCTTTGAGACTTTAAGCAGAGGATCCGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498360.5
CDS TCA 72 bp TCAAATGCTCCTGGACCCTCTAGCTTTTCAAGCATTTaGTTAATGGCAGCAGTTTTCCCAACACCAGATTCT +
Preference number: 6 (lower is better)
Translates to: SNAPGPSSFSSI*LMAAVFPTPDS
Trigger: AGAATCTGGTGTTGGGAAAACTGCTGCCATTAATCAAATGCTTGAAAAGCTAGAGGGTCCAGGAGCATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000450490.1
ENST00000638635.1
ENST00000682510.1
CDS TCA 72 bp GAGAGAGTCTGGATCATTTCCATTGCTGTTGACACTTaGGTACCAGCACATAACAGAAGAGGAGTTCTTATC +
Preference number: 6 (lower is better)
Translates to: ERVWIISIAVDT*VPAHNRRGVLI
Trigger: GATAAGAACTCCTCTTCTGTTATGTGCTGGTACTCAAGTGTCAACAGCAATGGAAATGATCCAGACTCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000682510.1
CDS GCA 72 bp ATTTCACAAGATGAGGCTGTACAGACTCAGGATTTCTaGTATCAGCTAGAATATCAAGAAGCTCGGCATTGC +
Preference number: 6 (lower is better)
Translates to: ISQDEAVQTQDF*YQLEYQEARHC
Trigger: GCAATGCCGAGCTTCTTGATATTCTAGCTGATAGCAGAAATCCTGAGTCTGTACAGCCTCATCTTGTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000474801.2
ENST00000682510.1
CDS GCA 72 bp AGAATTCATTTCTTTGTGATTGGAATCATAGCAGCTTaGTTCTTCGAAGCCAGCAAAGGGGAGAGACTCTGT +
Preference number: 6 (lower is better)
Translates to: RIHFFVIGIIAA*FFEASKGERLC
Trigger: ACAGAGTCTCTCCCCTTTGCTGGCTTCGAAGAAGCAAGCTGCTATGATTCCAATCACAAAGAAATGAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498360.5
CDS CCA 72 bp CAGTTAGTAAGACTGACGCACACTGAAAGCGCCTGCTaGCCATTGTTTTCCGATTTGCTAATAGTTGTTTTT +
Preference number: 6 (lower is better)
Translates to: QLVRLTHTESAC*PLFSDLLIVVF
Trigger: AAAAACAACTATTAGCAAATCGGAAAACAATGGCCAGCAGGCGCTTTCAGTGTGCGTCAGTCTTACTAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000638635.1
ENST00000682510.1
CDS CCA 72 bp GCCCTTAAACGCTCTCCTGACTATGTTGAGTTTCTTTaGCATAAATACGGAGAACTTCTCATCCTTGTCAGT +
Preference number: 6 (lower is better)
Translates to: ALKRSPDYVEFL*HKYGELLILVS
Trigger: ACTGACAAGGATGAGAAGTTCTCCGTATTTATGCCAAAGAAACTCAACATAGTCAGGAGAGCGTTTAAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428003.2
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000682510.1
CDS CAA 72 bp CACACTGAAAGCGCCTGCTGGCCATTGTTTTCCGATTaGCTAATAGTTGTTTTTCAGCAACGGTATCTTTGT +
Preference number: 6 (lower is better)
Translates to: HTESACWPLFSD*LIVVFQQRYLC
Trigger: ACAAAGATACCGTTGCTGAAAAACAACTATTAGCAAATCGGAAAACAATGGCCAGCAGGCGCTTTCAGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000638635.1
ENST00000682510.1
CDS CAA 72 bp AAGAATTCATTTCTTTGTGATTGGAATCATAGCAGCTaGCTTCTTCGAAGCCAGCAAAGGGGAGAGACTCTG +
Preference number: 6 (lower is better)
Translates to: KNSFLCDWNHSS*LLRSQQRGETL
Trigger: CAGAGTCTCTCCCCTTTGCTGGCTTCGAAGAAGCAAGCTGCTATGATTCCAATCACAAAGAAATGAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498360.5
CDS CAA 90 bp ATCGATCGTGCAGGAGCTAATCATAGAAGGATACACTCTACAATTTaGGCGGAAGCTAGGTCCTTCAGGACTCATGATCACAAAAATATG +
Preference number: 6 (lower is better)
Translates to: IDRAGANHRRIHSTI*AEARSFRTHDHKNM
Trigger: CATATTTTTGTGATCATGAGTCCTGAAGGACCTAGCTTCCGCCAAAATTGTAGAGTGTATCCTTCTATGATTAGCTCCTGCACGATCGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS CAA 90 bp AAGTCTTTGTCGCGCAATTTTAAGGACGTTTTGAGCTTCAGCTACTaGGATTTGTTTAGGGCCCACAACCTTCTGTACTTCATGGTAGTT +
Preference number: 6 (lower is better)
Translates to: KSLSRNFKDVLSFSY*DLFRAHNLLYFMVV
Trigger: AACTACCATGAAGTACAGAAGGTTGTGGGCCCTAAACAAATCCAAGTAGCTGAAGCTCAAAACGTCCTTAAAATTGCGCGACAAAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS TCA 72 bp AAGATTCTCTACTTTACAGTTTTTATCAAGCGGAACTaGCTTCCCAATAATCTCCTGGAGAGCCTCCCAATG +
Preference number: 6 (lower is better)
Translates to: KILYFTVFIKRN*LPNNLLESLPM
Trigger: CATTGGGAGGCTCTCCAGGAGATTATTGGGAAGTCAGTTCCGCTTGATAAAAACTGTAAAGTAGAGAATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000682510.1
CDS GCA 72 bp TGTTTGCATCTCTTCCTCTCGTGCCCTCAAAATGTGTaGAAATGTTTCCATAAATTGCAAGTAGCTATTGGG +
Preference number: 6 (lower is better)
Translates to: CLHLFLSCPQNV*KCFHKLQVAIG
Trigger: CCCAATAGCTACTTGCAATTTATGGAAACATTTGCACACATTTTGAGGGCACGAGAGGAAGAGATGCAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS GCA 72 bp AGAAGTAACTTTGCCGTTGCCCAGTTAGGTTTCTTTTaGAGAAGAATACACACTGCATTCATGACAGTCAGT +
Preference number: 6 (lower is better)
Translates to: RSNFAVAQLGFF*RRIHTAFMTVS
Trigger: ACTGACTGTCATGAATGCAGTGTGTATTCTTCTGCAAAAGAAACCTAACTGGGCAACGGCAAAGTTACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS GCA 72 bp CTGATGTCCTCAAGTTGTTTCAATGCCTGGGTAGCTTaGTGTAACTGCTCTTCACAAAATTCATCTAGAGAA +
Preference number: 6 (lower is better)
Translates to: LMSSSCFNAWVA*CNCSSQNSSRE
Trigger: TTCTCTAGATGAATTTTGTGAAGAGCAGTTACAGCAAGCTACCCAGGCATTGAAACAACTTGAGGACATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366849.5
ENST00000400952.7
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000682510.1
CDS CAA 90 bp TGGCTTGAGACAGGGATTTCCCAGAGCTATAATGATAGGCAGCTCTaGTTTAAACTCTGTTACCACTTGCTTAAGATGTGTTACCATATC +
Preference number: 6 (lower is better)
Translates to: WLETGISQSYNDRQL*FKLCYHLLKMCYHI
Trigger: GATATGGTAACACATCTTAAGCAAGTGGTAACAGAGTTTAAACAAGAGCTGCCTATCATTATAGCTCTGGGAAATCCCTGTCTCAAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000682510.1
CDS CAA 90 bp GGTTGTAAGAAGAATTCATTTCTTTGTGATTGGAATCATAGCAGCTaGCTTCTTCGAAGCCAGCAAAGGGGAGAGACTCTGTTCTATCAT +
Preference number: 6 (lower is better)
Translates to: GCKKNSFLCDWNHSS*LLRSQQRGETLFYH
Trigger: ATGATAGAACAGAGTCTCTCCCCTTTGCTGGCTTCGAAGAAGCAAGCTGCTATGATTCCAATCACAAAGAAATGAATTCTTCTTACAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498360.5
CDS TCA 72 bp TGTGACAGACTCTCTTTGGGAATTTGCCTCCTTAGATaGCGTGTCATTCAAATCATCACTTTGTTCAAATCC +
Preference number: 6 (lower is better)
Translates to: CDRLSLGICLLR*RVIQIITLFKS
Trigger: GGATTTGAACAAAGTGATGATTTGAATGACACGTCATCTAAGGAGGCAAATTCCCAAAGAGAGTCTGTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000682510.1
CDS GCA 72 bp ACGTGGGCTGATATCATTCACAACTGGAACACAAGCTaGAACTATAGACAGATCTTGAATATTCTTCCATGT +
Preference number: 6 (lower is better)
Translates to: TWADIIHNWNTS*NYRQILNILPC
Trigger: ACATGGAAGAATATTCAAGATCTGTCTATAGTTGCAGCTTGTGTTCCAGTTGTGAATGATATCAGCCCACGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS CCA 72 bp GAGTTATGGCATCAAGGGAAATACTCTCCAGTAACTTaGAACGTTGATCTTCTAAATGAGGAACTTCATGAG +
Preference number: 6 (lower is better)
Translates to: ELWHQGKYSPVT*NVDLLNEELHE
Trigger: CTCATGAAGTTCCTCATTTAGAAGATCAACGTTCCAAGTTACTGGAGAGTATTTCCCTTGATGCCATAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS CCA 72 bp TCCATTATTGAAACCAAATCAATGAAGATAGACAGCTaGGGATCTTGGCAAAGAGGAGTAATTGTGGCTGAA +
Preference number: 6 (lower is better)
Translates to: SIIETKSMKIDS*GSWQRGVIVAE
Trigger: TTCAGCCACAATTACTCCTCTTTGCCAAGATCCCCAGCTGTCTATCTTCATTGATTTGGTTTCAATAATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS CAA 72 bp AATTTTAAGGACGTTTTGAGCTTCAGCTACTTGGATTaGTTTAGGGCCCACAACCTTCTGTACTTCATGGTA +
Preference number: 6 (lower is better)
Translates to: NFKDVLSFSYLD*FRAHNLLYFMV
Trigger: TACCATGAAGTACAGAAGGTTGTGGGCCCTAAACAAATCCAAGTAGCTGAAGCTCAAAACGTCCTTAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS TCA 72 bp TCGGGGTCCCTGACTTCCGGAAATCAGAAAATATCTTaGATTGCCGTAATAAATAGTAATGTCTTCTTTCTG +
Preference number: 6 (lower is better)
Translates to: SGSLTSGNQKIS*IAVINSNVFFL
Trigger: CAGAAAGAAGACATTACTATTTATTACGGCAATTCAAGATATTTTCTGATTTCCGGAAGTCAGGGACCCCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453375.1
CDS CCA 72 bp GAAACCAAATCAATGAAGATAGACAGCTGGGGATCTTaGCAAAGAGGAGTAATTGTGGTTATACATTTTTCC +
Preference number: 6 (lower is better)
Translates to: ETKSMKIDSWGS*QRGVIVVIHFS
Trigger: GGAAAAATGTATAACCACAATTACTCCTCTTTGCCAAGATCCCCAGCTGTCTATCTTCATTGATTTGGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000682510.1
CDS CCA 72 bp CTCTTTTCTATATCCTTGAATGTGACAGACTCTCTTTaGGAATTTGCCTCCTTAGATGACGTGTCATTCAAA +
Preference number: 6 (lower is better)
Translates to: LFSISLNVTDSL*EFASLDDVSFK
Trigger: TTTGAATGACACGTCATCTAAGGAGGCAAATTCCCAAAGAGAGTCTGTCACATTCAAGGATATAGAAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000682510.1
CDS CAA 72 bp ATGAGGAACTTCATGAGTTACCACAGTAGACAAGAGTaGATCTTGCAAACCTTGGAATGTTACAGTGAAGTT +
Preference number: 6 (lower is better)
Translates to: MRNFMSYHSRQE*ILQTLECYSEV
Trigger: AACTTCACTGTAACATTCCAAGGTTTGCAAGATCAACTCTTGTCTACTGTGGTAACTCATGAAGTTCCTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS CAA 90 bp CCTCCGTATCTGGGATTCATGGTGATAAATACCGCACAAGACATATaGATACGAATTTCTTTTCCTTCCAGTACAAACCTAAAAGACATT +
Preference number: 6 (lower is better)
Translates to: PPYLGFMVINTAQDI*IRISFPSSTNLKDI
Trigger: AATGTCTTTTAGGTTTGTACTGGAAGGAAAAGAAATTCGTATCAATATGTCTTGTGCGGTATTTATCACCATGAATCCCAGATACGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS TCA 72 bp ACCATCAGAACAGTGGGTTTCCCTTTTAATCCTGCGTaGATAAACACCTTTTTAAAGACTTCTTTGAATTCG +
Preference number: 6 (lower is better)
Translates to: TIRTVGFPFNPA*INTFLKTSLNS
Trigger: CGAATTCAAAGAAGTCTTTAAAAAGGTGTTTATTCACGCAGGATTAAAAGGGAAACCCACTGTTCTGATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS GCA 72 bp TTCTCTTATAGCCTCGATAACAATCAAGGTTTCATCTaGTTCAGAAAGACATTTAAACTCCCGTTTCTTCGT +
Preference number: 6 (lower is better)
Translates to: FSYSLDNNQGFI*FRKTFKLPFLR
Trigger: ACGAAGAAACGGGAGTTTAAATGTCTTTCTGAAGCAGATGAAACCTTGATTGTTATCGAGGCTATAAGAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430092.5
ENST00000439375.6
CDS GCA 72 bp AGAAATTCTTCTATTTCAGTGGGATCACATTCCAGCTaGTGCAATGATGATTCCACAACAACGTTGAAAATA +
Preference number: 6 (lower is better)
Translates to: RNSSISVGSHSS*CNDDSTTTLKI
Trigger: TATTTTCAACGTTGTTGTGGAATCATCATTGCAGCAGCTGGAATGTGATCCCACTGAAATAGAAGAATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445597.6
CDS CCA 72 bp TCCATTATTGAAACCAAATCAATGAAGATAGACAGCTaGGGATCTTGGCAAAGAGGAGTAATTGTGGTTATA +
Preference number: 6 (lower is better)
Translates to: SIIETKSMKIDS*GSWQRGVIVVI
Trigger: TATAACCACAATTACTCCTCTTTGCCAAGATCCCCAGCTGTCTATCTTCATTGATTTGGTTTCAATAATGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000682510.1
CDS CAA 72 bp AACTTCATGAGTTACCACAGTAGACAAGAGTTGATCTaGCAAACCTTGGAATGTTACAGTGAAGTTGATCAT +
Preference number: 6 (lower is better)
Translates to: NFMSYHSRQELI*QTLECYSEVDH
Trigger: ATGATCAACTTCACTGTAACATTCCAAGGTTTGCAAGATCAACTCTTGTCTACTGTGGTAACTCATGAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS CAA 72 bp TCTGAGATGACCAGTTTTGTAAACCCAATTGCTGAGTaGCAGTATATATTACTTTCTCCAAGGCAAGTTGAT +
Preference number: 6 (lower is better)
Translates to: SEMTSFVNPIAE*QYILLSPRQVD
Trigger: ATCAACTTGCCTTGGAGAAAGTAATATATACTGCAACTCAGCAATTGGGTTTACAAAACTGGTCATCTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000682510.1
CDS CAA 90 bp GGAATATGGCAATTTGCTCTTCTGAAATATGGATCTGGTGATGCTTaGCAACAGAATATAGCTGAGACATTGTTAAGAACTCTTTTTCTA +
Preference number: 6 (lower is better)
Translates to: GIWQFALLKYGSGDA*QQNIAETLLRTLFL
Trigger: TAGAAAAAGAGTTCTTAACAATGTCTCAGCTATATTCTGTTGCAAAGCATCACCAGATCCATATTTCAGAAGAGCAAATTGCCATATTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000682510.1
CDS GCA 72 bp TTCTCTTATAGCCTCGATAACAATCAAGGTTTCATCTaGTTCAGAAAGACTGTCACTGGTATCACATTTAAA +
Preference number: 6 (lower is better)
Translates to: FSYSLDNNQGFI*FRKTVTGITFK
Trigger: TTTAAATGTGATACCAGTGACAGTCTTTCTGAAGCAGATGAAACCTTGATTGTTATCGAGGCTATAAGAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445597.6
ENST00000682510.1
CDS CAA 72 bp TTAAGAATCATCTCCTTGGTTTTGGCAGCTGTTACATaGGTGCTAAAATTTATTGTAGAGACTACAACTCCT +
Preference number: 6 (lower is better)
Translates to: LRIISLVLAAVT*VLKFIVETTTP
Trigger: AGGAGTTGTAGTCTCTACAATAAATTTTAGCACCAATGTAACAGCTGCCAAAACCAAGGAGATGATTCTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000450490.1
ENST00000638635.1
ENST00000682510.1
CDS CAA 72 bp AGTTACCACAGTAGACAAGAGTTGATCTTGCAAACCTaGGAATGTTACAGTGAAGTTGATCATAGTAACAAA +
Preference number: 6 (lower is better)
Translates to: SYHSRQELILQT*ECYSEVDHSNK
Trigger: TTTGTTACTATGATCAACTTCACTGTAACATTCCAAGGTTTGCAAGATCAACTCTTGTCTACTGTGGTAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327794.10
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000638635.1
ENST00000682510.1
CDS CAA 72 bp CAATTTGCTCTTCTGAAATATGGATCTGGTGATGCTTaGCAACAGAATATAGCTGAGACATTGTTAAGAACT +
Preference number: 6 (lower is better)
Translates to: QFALLKYGSGDA*QQNIAETLLRT
Trigger: AGTTCTTAACAATGTCTCAGCTATATTCTGTTGCAAAGCATCACCAGATCCATATTTCAGAAGAGCAAATTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000445597.6
ENST00000682510.1
CDS GCA 72 bp ATGTATATTACAATTTTGCAGAATTTCAAGGACTCCTaGAGAAGTGGTTATCTGCAAAGCATTCTGTTTGTT +
Preference number: 6 (lower is better)
Translates to: MYITILQNFKDS*RSGYLQSILFV
Trigger: AACAAACAGAATGCTTTGCAGATAACCACTTCTGCAGGAGTCCTTGAAATTCTGCAAAATTGTAATATACAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430092.5
ENST00000439375.6
ENST00000682510.1