RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAH11 (Homo sapiens)

Ensembl gene IDs: ENSG00000105877

Ensembl transcript IDs: ENST00000328843.10, ENST00000409508.8, ENST00000421290.1, ENST00000465129.1, ENST00000465593.1, ENST00000479878.1, ENST00000483691.1, ENST00000496218.1, ENST00000605912.1, ENST00000607050.1, ENST00000607413.5, ENST00000620169.4

Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CCTCCAGGCCGGCCCCCGAGGTTAGGCGAAGGGTCGGGGCTTCTCTaGAGTCTCGCGCCTCCCGGGCTGCCACCTGGGCTGCCATTGGGC +
Preference number: 5 (lower is better)
Translates to: PPGRPPRLGEGSGLL*SLAPPGLPPGLPLG
Trigger: GCCCAATGGCAGCCCAGGTGGCAGCCCGGGAGGCGCGAGACTTCAGAGAAGCCCCGACCCTTCGCCTAACCTCGGGGGCCGGCCTGGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp CGGGGCTTCTCTGAAGTCTCGCGCCTCCCGGGCTGCCACCTGGGCTaGCATTGGGCAACCGTCCGAGGGAACGCGAGGCCGGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: RGFSEVSRLPGCHLG*HWATVRGNARPAGS
Trigger: GGAGCCAGCCGGCCTCGCGTTCCCTCGGACGGTTGCCCAATGGCAGCCCAGGTGGCAGCCCGGGAGGCGCGAGACTTCAGAGAAGCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409508.8
CDS CCA 90 bp AGCATCATCGCCAGGCGGCCGCCGAGGAAGCGCACCCGCGCGTCTTaGGCGAAACTCCGCGCTCTCCTGGCCGCCGCCTCCTCCTCGTTC +
Preference number: 5 (lower is better)
Translates to: SIIARRPPRKRTRAS*AKLRALLAAASSSF
Trigger: GAACGAGGAGGAGGCGGCGGCCAGGAGAGCGCGGAGTTTCGCCCAAGACGCGCGGGTGCGCTTCCTCGGCGGCCGCCTGGCGATGATGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 90 bp AGGGTCGGGGCTTCTCTGAAGTCTCGCGCCTCCCGGGCTGCCACCTaGGCTGCCATTGGGCAACCGTCCGAGGGAACGCGAGGCCGGCTG +
Preference number: 5 (lower is better)
Translates to: RVGASLKSRASRAAT*AAIGQPSEGTRGRL
Trigger: CAGCCGGCCTCGCGTTCCCTCGGACGGTTGCCCAATGGCAGCCCAGGTGGCAGCCCGGGAGGCGCGAGACTTCAGAGAAGCCCCGACCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409508.8
CDS CCA 90 bp CGAGGAAGCGCACCCGCGCGTCTTGGGCGAAACTCCGCGCTCTCCTaGCCGCCGCCTCCTCCTCGTTCTCCTCCTCCTCCTCGAGCTCCA +
Preference number: 5 (lower is better)
Translates to: RGSAPARLGRNSALS*PPPPPRSPPPPRAP
Trigger: TGGAGCTCGAGGAGGAGGAGGAGAACGAGGAGGAGGCGGCGGCCAGGAGAGCGCGGAGTTTCGCCCAAGACGCGCGGGTGCGCTTCCTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 90 bp TTCTCTGAAGTCTCGCGCCTCCCGGGCTGCCACCTGGGCTGCCATTaGGCAACCGTCCGAGGGAACGCGAGGCCGGCTGGCTCCTCACCC +
Preference number: 5 (lower is better)
Translates to: FSEVSRLPGCHLGCH*ATVRGNARPAGSSP
Trigger: GGGTGAGGAGCCAGCCGGCCTCGCGTTCCCTCGGACGGTTGCCCAATGGCAGCCCAGGTGGCAGCCCGGGAGGCGCGAGACTTCAGAGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409508.8
CDS TCA 90 bp GCCGGTTGTCCTCGCTTTCCAAATACTGGCTCCATTTCTCCTCCGTaGACCCCAGCATCATCGCCAGGCGGCCGCCGAGGAAGCGCACCC +
Preference number: 5 (lower is better)
Translates to: AGCPRFPNTGSISPP*TPASSPGGRRGSAP
Trigger: GGGTGCGCTTCCTCGGCGGCCGCCTGGCGATGATGCTGGGGTTCACGGAGGAGAAATGGAGCCAGTATTTGGAAAGCGAGGACAACCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp CCCAGCCCCTCATGGTCTGCTGGATCACCTTCACGTTTTTCTGTGTaGGCTCAACTCTGTGCTCCAACTCGGACGTGGCTGCCCTCACCC +
Preference number: 5 (lower is better)
Translates to: PSPSWSAGSPSRFSV*AQLCAPTRTWLPSP
Trigger: GGGTGAGGGCAGCCACGTCCGAGTTGGAGCACAGAGTTGAGCGCACACAGAAAAACGTGAAGGTGATCCAGCAGACCATGAGGGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp TCTCTCCTGGGAGGTAGCACGCACCTGGCCCAGCCCCTCATGGTCTaGTGGATCACCTTCACGTTTTTCTGTGTGCGCTCAACTCTGTGC +
Preference number: 5 (lower is better)
Translates to: SLLGGSTHLAQPLMV*WITFTFFCVRSTLC
Trigger: GCACAGAGTTGAGCGCACACAGAAAAACGTGAAGGTGATCCAGCAGACCATGAGGGGCTGGGCCAGGTGCGTGCTACCTCCCAGGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp AGGATGAAGCTCTCTTCAGGCTGCAGGCGGAGCTCCAGGGTAGACTaGCTGACCATCTGTTCAAAGTGCAGCTTCCTCCTCCGGGGCACA +
Preference number: 5 (lower is better)
Translates to: RMKLSSGCRRSSRVD*LTICSKCSFLLRGT
Trigger: TGTGCCCCGGAGGAGGAAGCTGCACTTTGAACAGATGGTCAGGCAGTCTACCCTGGAGCTCCGCCTGCAGCCTGAAGAGAGCTTCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp GGTTTGCATCTCTTGGAATCTGCAGCTGCTGAACTGCAGAGTGGGTaGACGTGGGGAGGAGTCCTGCGGGCCTCAGGATGGGGACTTCAA +
Preference number: 5 (lower is better)
Translates to: GLHLLESAAAELQSG*TWGGVLRASGWGLQ
Trigger: TTGAAGTCCCCATCCTGAGGCCCGCAGGACTCCTCCCCACGTGCACCCACTCTGCAGTTCAGCAGCTGCAGATTCCAAGAGATGCAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607050.1
CDS CCA 90 bp TCACGTTTTTCTGTGTGCGCTCAACTCTGTGCTCCAACTCGGACGTaGCTGCCCTCACCCTCTCGATGTAGCCCCAGCAGTCATCCTGCC +
Preference number: 5 (lower is better)
Translates to: SRFSVCAQLCAPTRT*LPSPSRCSPSSHPA
Trigger: GGCAGGATGACTGCTGGGGCTACATCGAGAGGGTGAGGGCAGCCACGTCCGAGTTGGAGCACAGAGTTGAGCGCACACAGAAAAACGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp GTTTTTCTGTGTGCGCTCAACTCTGTGCTCCAACTCGGACGTGGCTaGCCTCACCCTCTCGATGTAGCCCCAGCAGTCATCCTGCCATGT +
Preference number: 5 (lower is better)
Translates to: VFLCALNSVLQLGRG*PHPLDVAPAVILPC
Trigger: ACATGGCAGGATGACTGCTGGGGCTACATCGAGAGGGTGAGGGCAGCCACGTCCGAGTTGGAGCACAGAGTTGAGCGCACACAGAAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp ACAAGGCAAGCCGGGCTGGTGCTTTCCAGAAACTCCCCAAGAACCTaGCGGTTGTCCTCGCTTTCCAAATACTGGCTCCATTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TRQAGLVLSRNSPRT*RLSSLSKYWLHFSS
Trigger: GGAGGAGAAATGGAGCCAGTATTTGGAAAGCGAGGACAACCGGCAGGTTCTTGGGGAGTTTCTGGAAAGCACCAGCCCGGCTTGCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000607050.1
ENST00000620169.4
CDS GCA 90 bp GATGTAGCCCCAGCAGTCATCCTGCCATGTCAGCCACGTTGTGGCTaGTGTCAGCTGCTCGTCAATAGCCCTCAGCTCATCTTCAATCAG +
Preference number: 5 (lower is better)
Translates to: DVAPAVILPCQPRCG*CQLLVNSPQLIFNQ
Trigger: CTGATTGAAGATGAGCTGAGGGCTATTGACGAGCAGCTGACAGCAGCCACAACGTGGCTGACATGGCAGGATGACTGCTGGGGCTACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp GTCTTTGGGCACTCTTCCCCGAGGAGCCAGAAGGACCATCACGGCTaGAGTAACATTGGTAACTGCGATGGGAGGGTTGGGAAAGGCTTT +
Preference number: 5 (lower is better)
Translates to: VFGHSSPRSQKDHHG*SNIGNCDGRVGKGF
Trigger: AAAGCCTTTCCCAACCCTCCCATCGCAGTTACCAATGTTACTGCAGCCGTGATGGTCCTTCTGGCTCCTCGGGGAAGAGTGCCCAAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 90 bp CAAGATCTACCCGAAGTTCCTGGATTCCATAGCCCTCGGTCAGAGTaGTCTGAAAGACCTCAAGGCCACGAAGGTAAGCTGCCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: QDLPEVPGFHSPRSE*SERPQGHEGKLPAW
Trigger: CCAGGCTGGCAGCTTACCTTCGTGGCCTTGAGGTCTTTCAGATCACTCTGACCGAGGGCTATGGAATCCAGGAACTTCGGGTAGATCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 90 bp GGCGGAAGGGTAAATATCAAGGCCGAGCAGGCAGGGGCTGGATCATaGGCAGATGGTGATATTGATGCCAGGCTGAGGAACAAGAGTCTT +
Preference number: 5 (lower is better)
Translates to: GGRVNIKAEQAGAGS*ADGDIDARLRNKSL
Trigger: AAGACTCTTGTTCCTCAGCCTGGCATCAATATCACCATCTGCTCATGATCCAGCCCCTGCCTGCTCGGCCTTGATATTTACCCTTCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483691.1
CDS GCA 90 bp CAGCAGTCATCCTGCCATGTCAGCCACGTTGTGGCTGCTGTCAGCTaGTCGTCAATAGCCCTCAGCTCATCTTCAATCAGAGGGTATTCA +
Preference number: 5 (lower is better)
Translates to: QQSSCHVSHVVAAVS*SSIALSSSSIRGYS
Trigger: TGAATACCCTCTGATTGAAGATGAGCTGAGGGCTATTGACGAGCAGCTGACAGCAGCCACAACGTGGCTGACATGGCAGGATGACTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp CTCCTGGCGATACTGCCTTGTGAAGGGTCCGACGTAAGACACAAATaGCGCCGTGAGAAGAACATCTCCACAGAGTGTCTTCTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: LLAILPCEGSDVRHK*RREKNISTECLLLS
Trigger: GCTCAAGAGAAGACACTCTGTGGAGATGTTCTTCTCACGGCGGCATTTGTGTCTTACGTCGGACCCTTCACAAGGCAGTATCGCCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp CCCCTTCATTCTCTCTCTCTCCTGCCACCATGTGAAGAAGGTCCGTaGTTGCCCCTTGCCTTCCTCCATGATTGTCAGTTTCCTGAGTTC +
Preference number: 5 (lower is better)
Translates to: PLHSLSLLPPCEEGP*LPLAFLHDCQFPEF
Trigger: GAACTCAGGAAACTGACAATCATGGAGGAAGGCAAGGGGCAAGCACGGACCTTCTTCACATGGTGGCAGGAGAGAGAGAGAATGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465129.1
CDS GCA 90 bp TTCATTCTCTCTCTCTCCTGCCACCATGTGAAGAAGGTCCGTGCTTaGCCCTTGCCTTCCTCCATGATTGTCAGTTTCCTGAGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: FILSLSCHHVKKVRA*PLPSSMIVSFLSSP
Trigger: GGGAGAACTCAGGAAACTGACAATCATGGAGGAAGGCAAGGGGCAAGCACGGACCTTCTTCACATGGTGGCAGGAGAGAGAGAGAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465129.1
CDS CCA 90 bp GCCAGCAAGTCATTAATCAGCACGAGGAAGCTCTCATCTAGAACCTaGGCATCTGTCAGCAGGAACACAGTGGGCATGTTCTTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: ASKSLISTRKLSSRT*ASVSRNTVGMFLAP
Trigger: TGGAGCCAAGAACATGCCCACTGTGTTCCTGCTGACAGATGCCCAGGTTCTAGATGAGAGCTTCCTCGTGCTGATTAATGACTTGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 90 bp TCTCTGCCACGGTGGTCTTTGTTGCCTCCAATCTCTCTACCAGTTTaGTGTCATCCAGAAAGCTTCCCTCTGCCGCAGAAAGGCGCAAAA +
Preference number: 5 (lower is better)
Translates to: SLPRWSLLPPISLPV*CHPESFPLPQKGAK
Trigger: TTTTGCGCCTTTCTGCGGCAGAGGGAAGCTTTCTGGATGACACCAAACTGGTAGAGAGATTGGAGGCAACAAAGACCACCGTGGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS TCA 90 bp TGGTCTTTTCCCGGCTCACTTTCTCCGTCTGAAGGCCGATCTTTGTaGTCAGAGCTTCGGCATCATGATTTCTCAGTTGCAGCTCGGCTT +
Preference number: 5 (lower is better)
Translates to: WSFPGSLSPSEGRSL*SELRHHDFSVAARL
Trigger: AAGCCGAGCTGCAACTGAGAAATCATGATGCCGAAGCTCTGATCACAAAGATCGGCCTTCAGACGGAGAAAGTGAGCCGGGAAAAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp ATCAGGATAGAGATGCGTCCCTGCATGTCTTCCACCTTGTCAGCCTaGTCGATCGCTCTGTGGAACAGCACGTTAAAAGCCTTCAAAGAG +
Preference number: 5 (lower is better)
Translates to: IRIEMRPCMSSTLSA*SIALWNSTLKAFKE
Trigger: CTCTTTGAAGGCTTTTAACGTGCTGTTCCACAGAGCGATCGAGCAGGCTGACAAGGTGGAAGACATGCAGGGACGCATCTCTATCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS GCA 90 bp CTCCAATCTCTCTACCAGTTTGGTGTCATCCAGAAAGCTTCCCTCTaGCGCAGAAAGGCGCAAAAGGAGATCGTCTTCCAGATACTTGAG +
Preference number: 5 (lower is better)
Translates to: LQSLYQFGVIQKASL*RRKAQKEIVFQILE
Trigger: CTCAAGTATCTGGAAGACGATCTCCTTTTGCGCCTTTCTGCGGCAGAGGGAAGCTTTCTGGATGACACCAAACTGGTAGAGAGATTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS GCA 90 bp GGCTTCAATCACCTTGTGCTCTATCTCTGCCACGGTGGTCTTTGTTaGCTCCAATCTCTCTACCAGTTTGGTGTCATCCAGAAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: GFNHLVLYLCHGGLC*LQSLYQFGVIQKAS
Trigger: GGAAGCTTTCTGGATGACACCAAACTGGTAGAGAGATTGGAGGCAACAAAGACCACCGTGGCAGAGATAGAGCACAAGGTGATTGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS CCA 90 bp GATTCCAGCCCAGATCTTGTGGGTTCACATACAGAATACCAGCTCTaGAAACAGTGGCCGGGGTTGCGCTCCTTAAGTGATGTATCTCAA +
Preference number: 5 (lower is better)
Translates to: DSSPDLVGSHTEYQL*KQWPGLRSLSDVSQ
Trigger: TTGAGATACATCACTTAAGGAGCGCAACCCCGGCCACTGTTTCCAGAGCTGGTATTCTGTATGTGAACCCACAAGATCTGGGCTGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 90 bp CTAGAACCTGGGCATCTGTCAGCAGGAACACAGTGGGCATGTTCTTaGCTCCAGTTCGGATGTACAAATTGGCAAGATCTACCCGAAGTT +
Preference number: 5 (lower is better)
Translates to: LEPGHLSAGTQWACS*LQFGCTNWQDLPEV
Trigger: AACTTCGGGTAGATCTTGCCAATTTGTACATCCGAACTGGAGCCAAGAACATGCCCACTGTGTTCCTGCTGACAGATGCCCAGGTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 90 bp GGAAGCTCTCATCTAGAACCTGGGCATCTGTCAGCAGGAACACAGTaGGCATGTTCTTGGCTCCAGTTCGGATGTACAAATTGGCAAGAT +
Preference number: 5 (lower is better)
Translates to: GSSHLEPGHLSAGTQ*ACSWLQFGCTNWQD
Trigger: ATCTTGCCAATTTGTACATCCGAACTGGAGCCAAGAACATGCCCACTGTGTTCCTGCTGACAGATGCCCAGGTTCTAGATGAGAGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 90 bp AGAGTGTTGGATGTCACTGTCAGGAATTCTATTTCAGCATTTGGGTaGAGGCCATACAGTGCCGGGCTTTCTGGAGGAAGCATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RVLDVTVRNSISAFG*RPYSAGLSGGSISS
Trigger: AGAGGAGATGCTTCCTCCAGAAAGCCCGGCACTGTATGGCCTCCACCCAAATGCTGAAATAGAATTCCTGACAGTGACATCCAACACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 90 bp GAAGAGAGTGTTGGATGTCACTGTCAGGAATTCTATTTCAGCATTTaGGTGGAGGCCATACAGTGCCGGGCTTTCTGGAGGAAGCATCTC +
Preference number: 5 (lower is better)
Translates to: EESVGCHCQEFYFSI*VEAIQCRAFWRKHL
Trigger: GAGATGCTTCCTCCAGAAAGCCCGGCACTGTATGGCCTCCACCCAAATGCTGAAATAGAATTCCTGACAGTGACATCCAACACTCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 90 bp CCCACCCAAATCTCATGTCAAATTAGAGGAGGGCTTAGTGGGAGGTaGTTGGATCATCAAGTGGGTGGATTTCCTCCTTGCTGTTCTCAC +
Preference number: 5 (lower is better)
Translates to: PTQISCQIRGGLSGR*LDHQVGGFPPCCSH
Trigger: GTGAGAACAGCAAGGAGGAAATCCACCCACTTGATGATCCAATCACCTCCCACTAAGCCCTCCTCTAATTTGACATGAGATTTGGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465129.1
CDS GCA 90 bp ATCTTACTCTTTCCTGTGCCTGCATTTCCAACTACAAAGACCGAGTaGCGCACAGCCAACAGTTCCTCAAGCTGGACAACTTTGAGGATG +
Preference number: 5 (lower is better)
Translates to: ILLFPVPAFPTTKTE*RTANSSSSWTTLRM
Trigger: CATCCTCAAAGTTGTCCAGCTTGAGGAACTGTTGGCTGTGCGGCACTCGGTCTTTGTAGTTGGAAATGCAGGCACAGGAAAGAGTAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 90 bp CATCAAGTGGGTGGATTTCCTCCTTGCTGTTCTCACGAGATCCGATaGTTTAAAAGTGTGTGGCACTTTCCCCTTCATTCTCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: HQVGGFPPCCSHEIR*FKSVWHFPLHSLSL
Trigger: GAGAGAGAGAGAATGAAGGGGAAAGTGCCACACACTTTTAAACCATCGGATCTCGTGAGAACAGCAAGGAGGAAATCCACCCACTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465129.1
CDS CCA 90 bp GTCAAATTAGAGGAGGGCTTAGTGGGAGGTGATTGGATCATCAAGTaGGTGGATTTCCTCCTTGCTGTTCTCACGAGATCCGATGGTTTA +
Preference number: 5 (lower is better)
Translates to: VKLEEGLVGGDWIIK*VDFLLAVLTRSDGL
Trigger: TAAACCATCGGATCTCGTGAGAACAGCAAGGAGGAAATCCACCCACTTGATGATCCAATCACCTCCCACTAAGCCCTCCTCTAATTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465129.1
CDS CCA 90 bp CCCAAATCTCATGTCAAATTAGAGGAGGGCTTAGTGGGAGGTGATTaGATCATCAAGTGGGTGGATTTCCTCCTTGCTGTTCTCACGAGA +
Preference number: 5 (lower is better)
Translates to: PKSHVKLEEGLVGGD*IIKWVDFLLAVLTR
Trigger: TCTCGTGAGAACAGCAAGGAGGAAATCCACCCACTTGATGATCCAATCACCTCCCACTAAGCCCTCCTCTAATTTGACATGAGATTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465129.1
CDS TCA 90 bp CCTACATCTGTGGTCCACCATATTTGTGAGCTGGTTAGTGCAACCTaGGCTGGGAAATCAAAAATCCACAGTTCCCTAGGTTTTTCCTCG +
Preference number: 5 (lower is better)
Translates to: PTSVVHHICELVSAT*AGKSKIHSSLGFSS
Trigger: CGAGGAAAAACCTAGGGAACTGTGGATTTTTGATTTCCCAGCTCAGGTTGCACTAACCAGCTCACAAATATGGTGGACCACAGATGTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 90 bp TATGGAAATCCTTCAGGGCTGTTTCGTAGCCTTCTTCCAGTCTACTaGAGGCTATTCCTACATCTGTGGTCCACCATATTTGTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: YGNPSGLFRSLLPVY*RLFLHLWSTIFVSW
Trigger: CCAGCTCACAAATATGGTGGACCACAGATGTAGGAATAGCCTTCAGTAGACTGGAAGAAGGCTACGAAACAGCCCTGAAGGATTTCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 90 bp GCGACGGAAATTTCACTGCTTTCATCTCTTTCTGCCACCACCGACTaGAGTCAGCTTGATAATCAGAAATCTGATCTTGTAGCAGGGTGC +
Preference number: 5 (lower is better)
Translates to: ATEISLLSSLSATTD*SQLDNQKSDLVAGC
Trigger: GCACCCTGCTACAAGATCAGATTTCTGATTATCAAGCTGACTTCAGTCGGTGGTGGCAGAAAGAGATGAAAGCAGTGAAATTTCCGTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 90 bp TTCTCCAAATCTGGCCTTTCAATACTGACAACCTCTGCCAGCAGCTaGGCTTCTAGACCATCTTCTGTGACTGTGAAATTGAGGAGAGTT +
Preference number: 5 (lower is better)
Translates to: FSKSGLSILTTSASS*ASRPSSVTVKLRRV
Trigger: AACTCTCCTCAATTTCACAGTCACAGAAGATGGTCTAGAAGCCCAGCTGCTGGCAGAGGTTGTCAGTATTGAAAGGCCAGATTTGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 90 bp CATTTTCTTTGGCTTCAATCACCTTGTGCTCTATCTCTGCCACGGTaGTCTTTGTTGCCTCCAATCTCTCTACCAGTTTGGTGTCATCCA +
Preference number: 5 (lower is better)
Translates to: HFLWLQSPCALSLPR*SLLPPISLPVWCHP
Trigger: TGGATGACACCAAACTGGTAGAGAGATTGGAGGCAACAAAGACCACCGTGGCAGAGATAGAGCACAAGGTGATTGAAGCCAAAGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS CCA 90 bp AATCAGCAGAAGAGACGAAATAGAAGCGAGGAAAGGCTATGCGCTTaGTTTCCAGGTATTCAGCGAGAGCTTTTTCACAAAGAGAAAGCC +
Preference number: 5 (lower is better)
Translates to: NQQKRRNRSEERLCA*FPGIQRELFHKEKA
Trigger: GGCTTTCTCTTTGTGAAAAAGCTCTCGCTGAATACCTGGAAACCAAGCGCATAGCCTTTCCTCGCTTCTATTTCGTCTCTTCTGCTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 90 bp GAATGCTATTGTTGCCTGGATCAAAGTGGGGCCACTCCTGAGAATTaGTGGAGCAAATGCTTGCTGTTGGAAATGGAAGCTAAAGATTTG +
Preference number: 5 (lower is better)
Translates to: ECYCCLDQSGATPEN*WSKCLLLEMEAKDL
Trigger: CAAATCTTTAGCTTCCATTTCCAACAGCAAGCATTTGCTCCATCAATTCTCAGGAGTGGCCCCACTTTGATCCAGGCAACAATAGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp TGGAATGCCTGTTCGATAGTGAACTTCGTAAGAAAACTTCATGGTTaGCCAGGTCTGACTGATTTCAGTAATAACCTTCTCAGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: WNACSIVNFVRKLHG*PGLTDFSNNLLSPQ
Trigger: CTGGGGACTGAGAAGGTTATTACTGAAATCAGTCAGACCTGGGCAACCATGAAGTTTTCTTACGAAGTTCACTATCGAACAGGCATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000465593.1
ENST00000620169.4
CDS GCA 90 bp CAAGTAAATCAGCAGAAGAGACGAAATAGAAGCGAGGAAAGGCTATaGGCTTGGTTTCCAGGTATTCAGCGAGAGCTTTTTCACAAAGAG +
Preference number: 5 (lower is better)
Translates to: QVNQQKRRNRSEERL*AWFPGIQRELFHKE
Trigger: CTCTTTGTGAAAAAGCTCTCGCTGAATACCTGGAAACCAAGCGCATAGCCTTTCCTCGCTTCTATTTCGTCTCTTCTGCTGATTTACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp TGCCCTGTGTGCAGAAACATCCTGATTGTCTTCAAACTGCAGATCTaGAATGCTGTCGAAAAGTTTGGCAAGGTGACATGTTACCTGTTT +
Preference number: 5 (lower is better)
Translates to: CPVCRNILIVFKLQI*NAVEKFGKVTCYLF
Trigger: AAACAGGTAACATGTCACCTTGCCAAACTTTTCGACAGCATTGCAGATCTGCAGTTTGAAGACAATCAGGATGTTTCTGCACACAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp GTAGTTGAAAGGCACACGGGATACTATGTAATCCTCAGAGAGACTTaGCAATGTGTCACCTACAAAGACTGTTTTTCCCACTCCTGCATT +
Preference number: 5 (lower is better)
Translates to: VVERHTGYYVILRET*QCVTYKDCFSHSCI
Trigger: AATGCAGGAGTGGGAAAAACAGTCTTTGTAGGTGACACATTGGCAAGTCTCTCTGAGGATTACATAGTATCCCGTGTGCCTTTCAACTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000605912.1
ENST00000620169.4
CDS TCA 90 bp AATTGCTCAAGAGTTGGTGGTTGTTCGGGAATTTCTTCATTTGCATaGGCATCCATTTCATCGGAAGACACAGCATGGCCATACAAGAGA +
Preference number: 5 (lower is better)
Translates to: NCSRVGGCSGISSFA*ASISSEDTAWPYKR
Trigger: TCTCTTGTATGGCCATGCTGTGTCTTCCGATGAAATGGATGCTCATGCAAATGAAGAAATTCCCGAACAACCACCAACTCTTGAGCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 90 bp GCATGTAATGTGGGTCCTTCCCTCTATCAGCAAAGTGGCAATAAATaGGGGGCTGTTGAAGCAGCATGTGACTATCTATACCTTCAAAAT +
Preference number: 5 (lower is better)
Translates to: ACNVGPSLYQQSGNK*GAVEAACDYLYLQN
Trigger: ATTTTGAAGGTATAGATAGTCACATGCTGCTTCAACAGCCCCTCATTTATTGCCACTTTGCTGATAGAGGGAAGGACCCACATTACATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp GTCCACATAATAATCAAAGATTGTTCCCTGCGACGGAAATTTCACTaGTTTCATCTCTTTCTGCCACCACCGACTGAAGTCAGCTTGATA +
Preference number: 5 (lower is better)
Translates to: VHIIIKDCSLRRKFH*FHLFLPPPTEVSLI
Trigger: TATCAAGCTGACTTCAGTCGGTGGTGGCAGAAAGAGATGAAAGCAGTGAAATTTCCGTCGCAGGGAACAATCTTTGATTATTATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 90 bp CATTTGAAGTCGTTGGAGAACCTGCTGGGCCCATTTCATATTTCCTaGGGTAAATGGCATGTTCTTGTTAAGAACTACATGACCACATTC +
Preference number: 5 (lower is better)
Translates to: HLKSLENLLGPFHIS*GKWHVLVKNYMTTF
Trigger: GAATGTGGTCATGTAGTTCTTAACAAGAACATGCCATTTACCTCAGGAAATATGAAATGGGCCCAGCAGGTTCTCCAACGACTTCAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 90 bp TTTTCTTTGCTGTACATTCCAACTGCCCTGTGTGCAGAAACATCCTaGTTGTCTTCAAACTGCAGATCTGCAATGCTGTCGAAAAGTTTG +
Preference number: 5 (lower is better)
Translates to: FSLLYIPTALCAETS*LSSNCRSAMLSKSL
Trigger: CAAACTTTTCGACAGCATTGCAGATCTGCAGTTTGAAGACAATCAGGATGTTTCTGCACACAGGGCAGTTGGAATGTACAGCAAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp TTTGAATTGCTCAAGAGTTGGTGGTTGTTCGGGAATTTCTTCATTTaGATGAGCATCCATTTCATCGGAAGACACAGCATGGCCATACAA +
Preference number: 5 (lower is better)
Translates to: FELLKSWWLFGNFFI*MSIHFIGRHSMAIQ
Trigger: TTGTATGGCCATGCTGTGTCTTCCGATGAAATGGATGCTCATGCAAATGAAGAAATTCCCGAACAACCACCAACTCTTGAGCAATTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp CTCAAGCTCTTCATTTGCCTTATCAAGCGCTGTGTATGGATTTTCTaGATTAAATCCAAGAGGGGCATAGTGTCTGAATCTCTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: LKLFICLIKRCVWIF*IKSKRGIVSESLSE
Trigger: TTCAGAGAGAGATTCAGACACTATGCCCCTCTTGGATTTAATGCAGAAAATCCATACACAGCGCTTGATAAGGCAAATGAAGAGCTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 90 bp GCTCATCTTCAATCAGAGGGTATTCAACTTCCAGGAGCGTCTGTTTaGGTTTATTATACCCTTGCACAAGAAGGTCAAGATTTCCAATGT +
Preference number: 5 (lower is better)
Translates to: AHLQSEGIQLPGASV*VYYTLAQEGQDFQC
Trigger: ACATTGGAAATCTTGACCTTCTTGTGCAAGGGTATAATAAACTCAAACAGACGCTCCTGGAAGTTGAATACCCTCTGATTGAAGATGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 90 bp GGTTCGACCAGCATAACCCGGGTTCATAGTAATAAATATTCCAACTaGTGGCTTCAGTGTGATAGCTTCCCCAAGAAATACAAATCTCTT +
Preference number: 5 (lower is better)
Translates to: GSTSITRVHSNKYSN*WLQCDSFPKKYKSL
Trigger: AAGAGATTTGTATTTCTTGGGGAAGCTATCACACTGAAGCCATCAGTTGGAATATTTATTACTATGAACCCGGGTTATGCTGGTCGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 90 bp GAGCTGGGGTGTTATAAAACTTGGAATGACTCCAGATCAGACAGATaGTATGAAATAATGGAGCGATTAATATGCGTGTCTGTGGGAATT +
Preference number: 5 (lower is better)
Translates to: ELGCYKTWNDSRSDR*YEIMERLICVSVGI
Trigger: AATTCCCACAGACACGCATATTAATCGCTCCATTATTTCATACCATCTGTCTGATCTGGAGTCATTCCAAGTTTTATAACACCCCAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 90 bp GAATATAGTACAAAGGGTGAGATGAATTTATCATTAGAAGAGCCATaGGCAATCACTCCACAAACATGGCGGAAGGGTAAATATCAAGGC +
Preference number: 5 (lower is better)
Translates to: EYSTKGEMNLSLEEP*AITPQTWRKGKYQG
Trigger: GCCTTGATATTTACCCTTCCGCCATGTTTGTGGAGTGATTGCTCATGGCTCTTCTAATGATAAATTCATCTCACCCTTTGTACTATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483691.1
CDS GCA 90 bp TGTTTGTACTCTGGAAGAGCCACTTCAAAAAGACGAGTAGATTCTTaGATCTGCAACATTTCTTCTTCTAAGGCCTCAAGCTCTTCATTT +
Preference number: 5 (lower is better)
Translates to: CLYSGRATSKRRVDS*ICNISSSKASSSSF
Trigger: AAATGAAGAGCTTGAGGCCTTAGAAGAAGAAATGTTGCAGATGCAAGAATCTACTCGTCTTTTTGAAGTGGCTCTTCCAGAGTACAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 90 bp GAAGGTTTAAACACAATCTCAGGAGGCAACAAGATCATTTGTGCTTaGAAAAACGGTGCCGGTTTCAATTGTTTCTCTGTATTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: EGLNTISGGNKIICA*KNGAGFNCFSVFFR
Trigger: TCTGAAGAATACAGAGAAACAATTGAAACCGGCACCGTTTTTTCAAGCACAAATGATCTTGTTGCCTCCTGAGATTGTGTTTAAACCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp GGGTATTCAACTTCCAGGAGCGTCTGTTTGAGTTTATTATACCCTTaGACAAGAAGGTCAAGATTTCCAATGTACTTTAAAATAGTGTTC +
Preference number: 5 (lower is better)
Translates to: GYSTSRSVCLSLLYP*TRRSRFPMYFKIVF
Trigger: GAACACTATTTTAAAGTACATTGGAAATCTTGACCTTCTTGTGCAAGGGTATAATAAACTCAAACAGACGCTCCTGGAAGTTGAATACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 90 bp AGCTTCATAAATGTCAATCTGTTCTTTGAATTGCTCAAGAGTTGGTaGTTGTTCGGGAATTTCTTCATTTGCATGAGCATCCATTTCATC +
Preference number: 5 (lower is better)
Translates to: SFINVNLFFELLKSW*LFGNFFICMSIHFI
Trigger: GATGAAATGGATGCTCATGCAAATGAAGAAATTCCCGAACAACCACCAACTCTTGAGCAATTCAAAGAACAGATTGACATTTATGAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 90 bp TGTTTAAAAAGTTTACAGAGTTCCATAAGTTCTTCACTCATCTCGTaGACTTGTCCATTTAAAATTGCTCCTTTGGTACCACCAAATTCC +
Preference number: 5 (lower is better)
Translates to: CLKSLQSSISSSLIS*TCPFKIAPLVPPNS
Trigger: GGAATTTGGTGGTACCAAAGGAGCAATTTTAAATGGACAAGTCCACGAGATGAGTGAAGAACTTATGGAACTCTGTAAACTTTTTAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 90 bp ATATATCCTCTATTTTTATTAAACGATCAAGAAACTTGTCAAATCTaGAAAACACCAGATGAGACTGGAAATCCCATGGTCTCAGCTTTC +
Preference number: 5 (lower is better)
Translates to: IYPLFLLNDQETCQI*KTPDETGNPMVSAF
Trigger: GAAAGCTGAGACCATGGGATTTCCAGTCTCATCTGGTGTTTTGCAGATTTGACAAGTTTCTTGATCGTTTAATAAAAATAGAGGATATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp GCCAGGCGGCCGCCGAGGAAGCGCACCCGCGCGTCTTaGGCGAAACTCCGCGCTCTCCTGGCCGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: ARRPPRKRTRAS*AKLRALLAAAS
Trigger: GGAGGCGGCGGCCAGGAGAGCGCGGAGTTTCGCCCAAGACGCGCGGGTGCGCTTCCTCGGCGGCCGCCTGGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp CGCCAGGCGGCCGCCGAGGAAGCGCACCCGCGCGTCTaGGGCGAAACTCCGCGCTCTCCTGGCCGCCGCCTC +
Preference number: 6 (lower is better)
Translates to: RQAAAEEAHPRV*GETPRSPGRRL
Trigger: GAGGCGGCGGCCAGGAGAGCGCGGAGTTTCGCCCAAGACGCGCGGGTGCGCTTCCTCGGCGGCCGCCTGGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 90 bp CAGCATCATCGCCAGGCGGCCGCCGAGGAAGCGCACCCGCGCGTCTaGGGCGAAACTCCGCGCTCTCCTGGCCGCCGCCTCCTCCTCGTT +
Preference number: 6 (lower is better)
Translates to: QHHRQAAAEEAHPRV*GETPRSPGRRLLLV
Trigger: AACGAGGAGGAGGCGGCGGCCAGGAGAGCGCGGAGTTTCGCCCAAGACGCGCGGGTGCGCTTCCTCGGCGGCCGCCTGGCGATGATGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp CGGCCCCCGAGGTTAGGCGAAGGGTCGGGGCTTCTCTaGAGTCTCGCGCCTCCCGGGCTGCCACCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: RPPRLGEGSGLL*SLAPPGLPPGL
Trigger: CAGCCCAGGTGGCAGCCCGGGAGGCGCGAGACTTCAGAGAAGCCCCGACCCTTCGCCTAACCTCGGGGGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp TCTGAAGTCTCGCGCCTCCCGGGCTGCCACCTGGGCTaGCATTGGGCAACCGTCCGAGGGAACGCGAGGCCG +
Preference number: 6 (lower is better)
Translates to: SEVSRLPGCHLG*HWATVRGNARP
Trigger: CGGCCTCGCGTTCCCTCGGACGGTTGCCCAATGGCAGCCCAGGTGGCAGCCCGGGAGGCGCGAGACTTCAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp GGTCGGGGCTTCTCTGAAGTCTCGCGCCTCCCGGGCTaGCACCTGGGCTGCCATTGGGCAACCGTCCGAGGG +
Preference number: 6 (lower is better)
Translates to: GRGFSEVSRLPG*HLGCHWATVRG
Trigger: CCCTCGGACGGTTGCCCAATGGCAGCCCAGGTGGCAGCCCGGGAGGCGCGAGACTTCAGAGAAGCCCCGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp GCACCCGCGCGTCTTGGGCGAAACTCCGCGCTCTCCTaGCCGCCGCCTCCTCCTCGTTCTCCTCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: APARLGRNSALS*PPPPPRSPPPP
Trigger: AGGAGGAGGAGGAGAACGAGGAGGAGGCGGCGGCCAGGAGAGCGCGGAGTTTCGCCCAAGACGCGCGGGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp ATGGGCAGGTCCCCTTGCCCGTCGCCTCTTACCTCCTaGGAAGCCGCAAGGCGCCCCGAGGCGGCGAAGCTA +
Preference number: 6 (lower is better)
Translates to: MGRSPCPSPLTS*EAARRPEAAKL
Trigger: TAGCTTCGCCGCCTCGGGGCGCCTTGCGGCTTCCCAGGAGGTAAGAGGCGACGGGCAAGGGGACCTGCCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607050.1
CDS TCA 72 bp CCTCGCTTTCCAAATACTGGCTCCATTTCTCCTCCGTaGACCCCAGCATCATCGCCAGGCGGCCGCCGAGGA +
Preference number: 6 (lower is better)
Translates to: PRFPNTGSISPP*TPASSPGGRRG
Trigger: TCCTCGGCGGCCGCCTGGCGATGATGCTGGGGTTCACGGAGGAGAAATGGAGCCAGTATTTGGAAAGCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp TGTGCGCTCAACTCTGTGCTCCAACTCGGACGTGGCTaGCCTCACCCTCTCGATGTAGCCCCAGCAGTCATC +
Preference number: 6 (lower is better)
Translates to: CALNSVLQLGRG*PHPLDVAPAVI
Trigger: GATGACTGCTGGGGCTACATCGAGAGGGTGAGGGCAGCCACGTCCGAGTTGGAGCACAGAGTTGAGCGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp TCTGTGTGCGCTCAACTCTGTGCTCCAACTCGGACGTaGCTGCCCTCACCCTCTCGATGTAGCCCCAGCAGT +
Preference number: 6 (lower is better)
Translates to: SVCAQLCAPTRT*LPSPSRCSPSS
Trigger: ACTGCTGGGGCTACATCGAGAGGGTGAGGGCAGCCACGTCCGAGTTGGAGCACAGAGTTGAGCGCACACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp TCCTGCGGGCCTCAGGATGGGGACTTCAAGCCAAGTTaGTTAAAGTGCCCGAGTGAGCGCCCCGCGGGAATC +
Preference number: 6 (lower is better)
Translates to: SCGPQDGDFKPS*LKCPSERPAGI
Trigger: GATTCCCGCGGGGCGCTCACTCGGGCACTTTAACAAACTTGGCTTGAAGTCCCCATCCTGAGGCCCGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607050.1
CDS GCA 72 bp GGAGGTAGCACGCACCTGGCCCAGCCCCTCATGGTCTaGTGGATCACCTTCACGTTTTTCTGTGTGCGCTCA +
Preference number: 6 (lower is better)
Translates to: GGSTHLAQPLMV*WITFTFFCVRS
Trigger: TGAGCGCACACAGAAAAACGTGAAGGTGATCCAGCAGACCATGAGGGGCTGGGCCAGGTGCGTGCTACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp TCCTGGGAGGTAGCACGCACCTGGCCCAGCCCCTCATaGTCTGCTGGATCACCTTCACGTTTTTCTGTGTGC +
Preference number: 6 (lower is better)
Translates to: SWEVARTWPSPS*SAGSPSRFSVC
Trigger: GCACACAGAAAAACGTGAAGGTGATCCAGCAGACCATGAGGGGCTGGGCCAGGTGCGTGCTACCTCCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp GCCGGAGAGCCACACGACAGCCGGAAGGGTAAGGTCTaGTGTCCAAGTATCGAGTTCTCGGCATCGCAGGAG +
Preference number: 6 (lower is better)
Translates to: AGEPHDSRKGKV*CPSIEFSASQE
Trigger: CTCCTGCGATGCCGAGAACTCGATACTTGGACACAAGACCTTACCCTTCCGGCTGTCGTGTGGCTCTCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000479878.1
ENST00000620169.4
CDS GCA 72 bp CCAGCAGTCATCCTGCCATGTCAGCCACGTTGTGGCTaGTGTCAGCTGCTCGTCAATAGCCCTCAGCTCATC +
Preference number: 6 (lower is better)
Translates to: PAVILPCQPRCG*CQLLVNSPQLI
Trigger: GATGAGCTGAGGGCTATTGACGAGCAGCTGACAGCAGCCACAACGTGGCTGACATGGCAGGATGACTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp CTCTCTTCAGGCTGCAGGCGGAGCTCCAGGGTAGACTaGCTGACCATCTGTTCAAAGTGCAGCTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: LSSGCRRSSRVD*LTICSKCSFLL
Trigger: GAGGAGGAAGCTGCACTTTGAACAGATGGTCAGGCAGTCTACCCTGGAGCTCCGCCTGCAGCCTGAAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp CACTCTTCCCCGAGGAGCCAGAAGGACCATCACGGCTaGAGTAACATTGGTAACTGCGATGGGAGGGTTGGG +
Preference number: 6 (lower is better)
Translates to: HSSPRSQKDHHG*SNIGNCDGRVG
Trigger: CCCAACCCTCCCATCGCAGTTACCAATGTTACTGCAGCCGTGATGGTCCTTCTGGCTCCTCGGGGAAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp ATGGTTTGCATCTCTTGGAATCTGCAGCTGCTGAACTaGAGAGTGGGTGCACGTGGGGAGGAGTCCTGCGGG +
Preference number: 6 (lower is better)
Translates to: MVCISWNLQLLN*RVGARGEESCG
Trigger: CCCGCAGGACTCCTCCCCACGTGCACCCACTCTGCAGTTCAGCAGCTGCAGATTCCAAGAGATGCAAACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607050.1
CDS GCA 72 bp GCCGGGCTGGTGCTTTCCAGAAACTCCCCAAGAACCTaGCGGTTGTCCTCGCTTTCCAAATACTGGCTCCAT +
Preference number: 6 (lower is better)
Translates to: AGLVLSRNSPRT*RLSSLSKYWLH
Trigger: ATGGAGCCAGTATTTGGAAAGCGAGGACAACCGGCAGGTTCTTGGGGAGTTTCTGGAAAGCACCAGCCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000607050.1
ENST00000620169.4
CDS GCA 72 bp ATCACCTTCACGTTTTTCTGTGTGCGCTCAACTCTGTaGTCCAACTCGGACGTGGCTGCCCTCACCCTCTCG +
Preference number: 6 (lower is better)
Translates to: ITFTFFCVRSTL*SNSDVAALTLS
Trigger: CGAGAGGGTGAGGGCAGCCACGTCCGAGTTGGAGCACAGAGTTGAGCGCACACAGAAAAACGTGAAGGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 90 bp CAAGCCGGGCTGGTGCTTTCCAGAAACTCCCCAAGAACCTGCCGGTaGTCCTCGCTTTCCAAATACTGGCTCCATTTCTCCTCCGTGAAC +
Preference number: 6 (lower is better)
Translates to: QAGLVLSRNSPRTCR*SSLSKYWLHFSSVN
Trigger: GTTCACGGAGGAGAAATGGAGCCAGTATTTGGAAAGCGAGGACAACCGGCAGGTTCTTGGGGAGTTTCTGGAAAGCACCAGCCCGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000607050.1
ENST00000620169.4
CDS CAA 90 bp ACTCTTCCCCGAGGAGCCAGAAGGACCATCACGGCTGCAGTAACATaGGTAACTGCGATGGGAGGGTTGGGAAAGGCTTTCAGCTCACTG +
Preference number: 6 (lower is better)
Translates to: TLPRGARRTITAAVT*VTAMGGLGKAFSSL
Trigger: CAGTGAGCTGAAAGCCTTTCCCAACCCTCCCATCGCAGTTACCAATGTTACTGCAGCCGTGATGGTCCTTCTGGCTCCTCGGGGAAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp CTTTCCCCTTCATTCTCTCTCTCTCCTGCCACCATGTaGAGAAGGTCCGTGCTTGCCCCTTGCCTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: LSPSFSLSPATM*RRSVLAPCLPP
Trigger: TGGAGGAAGGCAAGGGGCAAGCACGGACCTTCTTCACATGGTGGCAGGAGAGAGAGAGAATGAAGGGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465129.1
CDS GCA 72 bp GAGATGCGTCCCTGCATGTCTTCCACCTTGTCAGCCTaGTCGATCGCTCTGTGGAACAGCACGTTAAAAGCC +
Preference number: 6 (lower is better)
Translates to: EMRPCMSSTLSA*SIALWNSTLKA
Trigger: GGCTTTTAACGTGCTGTTCCACAGAGCGATCGAGCAGGCTGACAAGGTGGAAGACATGCAGGGACGCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS GCA 72 bp TGGGTGATGCTCTCCATCAGGATAGAGATGCGTCCCTaGATGTCTTCCACCTTGTCAGCCTGCTCGATCGCT +
Preference number: 6 (lower is better)
Translates to: WVMLSIRIEMRP*MSSTLSACSIA
Trigger: AGCGATCGAGCAGGCTGACAAGGTGGAAGACATGCAGGGACGCATCTCTATCCTGATGGAGAGCATCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS CCA 72 bp CATGGTGGAAGGGAAGCAAACATGTCCTTCTTTCCTTaGCGGCAGCAGAGAGAAGTGCCCAGCAAAGGGGGA +
Preference number: 6 (lower is better)
Translates to: HGGREANMSFFP*RQQREVPSKGG
Trigger: TCCCCCTTTGCTGGGCACTTCTCTCTGCTGCCGCCAAGGAAAGAAGGACATGTTTGCTTCCCTTCCACCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607413.5
CDS CAA 72 bp CGAGGAGCCAGAAGGACCATCACGGCTGCAGTAACATaGGTAACTGCGATGGGAGGGTTGGGAAAGGCTTTC +
Preference number: 6 (lower is better)
Translates to: RGARRTITAAVT*VTAMGGLGKAF
Trigger: GAAAGCCTTTCCCAACCCTCCCATCGCAGTTACCAATGTTACTGCAGCCGTGATGGTCCTTCTGGCTCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp ATCAGGATAGAGATGCGTCCCTGCATGTCTTCCACCTaGTCAGCCTGCTCGATCGCTCTGTGGAACAGCACG +
Preference number: 6 (lower is better)
Translates to: IRIEMRPCMSST*SACSIALWNST
Trigger: CGTGCTGTTCCACAGAGCGATCGAGCAGGCTGACAAGGTGGAAGACATGCAGGGACGCATCTCTATCCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS TCA 72 bp CCCGAAGTTCCTGGATTCCATAGCCCTCGGTCAGAGTaGTCTGAAAGACCTCAAGGCCACGAAGGTAAGCTG +
Preference number: 6 (lower is better)
Translates to: PEVPGFHSPRSE*SERPQGHEGKL
Trigger: CAGCTTACCTTCGTGGCCTTGAGGTCTTTCAGATCACTCTGACCGAGGGCTATGGAATCCAGGAACTTCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp TCCTGCCATGTCAGCCACGTTGTGGCTGCTGTCAGCTaGTCGTCAATAGCCCTCAGCTCATCTTCAATCAGA +
Preference number: 6 (lower is better)
Translates to: SCHVSHVVAAVS*SSIALSSSSIR
Trigger: TCTGATTGAAGATGAGCTGAGGGCTATTGACGAGCAGCTGACAGCAGCCACAACGTGGCTGACATGGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp TCATGGTCTGCTGGATCACCTTCACGTTTTTCTGTGTaGGCTCAACTCTGTGCTCCAACTCGGACGTGGCTG +
Preference number: 6 (lower is better)
Translates to: SWSAGSPSRFSV*AQLCAPTRTWL
Trigger: CAGCCACGTCCGAGTTGGAGCACAGAGTTGAGCGCACACAGAAAAACGTGAAGGTGATCCAGCAGACCATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp TCTCTCTCCTGCCACCATGTGAAGAAGGTCCGTGCTTaGCCCTTGCCTTCCTCCATGATTGTCAGTTTCCTG +
Preference number: 6 (lower is better)
Translates to: SLSCHHVKKVRA*PLPSSMIVSFL
Trigger: CAGGAAACTGACAATCATGGAGGAAGGCAAGGGGCAAGCACGGACCTTCTTCACATGGTGGCAGGAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465129.1
CDS CAA 72 bp GCTTTCAGCTCACTGAGGTTGACCCTGTTGAGTGTATaGAGTGCAGCTGTAGCAGCCACCAGTGCAGGCTCA +
Preference number: 6 (lower is better)
Translates to: AFSSLRLTLLSV*SAAVAATSAGS
Trigger: TGAGCCTGCACTGGTGGCTGCTACAGCTGCACTCAATACACTCAACAGGGTCAACCTCAGTGAGCTGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp ACGGCTGCAGTAACATTGGTAACTGCGATGGGAGGGTaGGGAAAGGCTTTCAGCTCACTGAGGTTGACCCTG +
Preference number: 6 (lower is better)
Translates to: TAAVTLVTAMGG*GKAFSSLRLTL
Trigger: CAGGGTCAACCTCAGTGAGCTGAAAGCCTTTCCCAACCCTCCCATCGCAGTTACCAATGTTACTGCAGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp CCCATGAAGACTTTAGCTGCTTTCCAACTTCGGTCTTaGGGCACTCTTCCCCGAGGAGCCAGAAGGACCATC +
Preference number: 6 (lower is better)
Translates to: PMKTLAAFQLRS*GTLPRGARRTI
Trigger: GATGGTCCTTCTGGCTCCTCGGGGAAGAGTGCCCAAAGACCGAAGTTGGAAAGCAGCTAAAGTCTTCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp CTCTCTCTCCTGCCACCATGTGAAGAAGGTCCGTGCTaGCCCCTTGCCTTCCTCCATGATTGTCAGTTTCCT +
Preference number: 6 (lower is better)
Translates to: LSLLPPCEEGPC*PLAFLHDCQFP
Trigger: AGGAAACTGACAATCATGGAGGAAGGCAAGGGGCAAGCACGGACCTTCTTCACATGGTGGCAGGAGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465129.1
CDS CAA 90 bp TCAACCTTTCCCATGAAGACTTTAGCTGCTTTCCAACTTCGGTCTTaGGGCACTCTTCCCCGAGGAGCCAGAAGGACCATCACGGCTGCA +
Preference number: 6 (lower is better)
Translates to: STFPMKTLAAFQLRS*GTLPRGARRTITAA
Trigger: TGCAGCCGTGATGGTCCTTCTGGCTCCTCGGGGAAGAGTGCCCAAAGACCGAAGTTGGAAAGCAGCTAAAGTCTTCATGGGAAAGGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 90 bp ATGCTCTCCATCAGGATAGAGATGCGTCCCTGCATGTCTTCCACCTaGTCAGCCTGCTCGATCGCTCTGTGGAACAGCACGTTAAAAGCC +
Preference number: 6 (lower is better)
Translates to: MLSIRIEMRPCMSST*SACSIALWNSTLKA
Trigger: GGCTTTTAACGTGCTGTTCCACAGAGCGATCGAGCAGGCTGACAAGGTGGAAGACATGCAGGGACGCATCTCTATCCTGATGGAGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS CAA 90 bp CTCTCTCTCTCCTGCCACCATGTGAAGAAGGTCCGTGCTTGCCCCTaGCCTTCCTCCATGATTGTCAGTTTCCTGAGTTCTCCCAGTCAT +
Preference number: 6 (lower is better)
Translates to: LSLSCHHVKKVRACP*PSSMIVSFLSSPSH
Trigger: ATGACTGGGAGAACTCAGGAAACTGACAATCATGGAGGAAGGCAAGGGGCAAGCACGGACCTTCTTCACATGGTGGCAGGAGAGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465129.1
CDS TCA 72 bp GGCCCGTGTAAGCATCCCAGACGCGGACTTCCTTGTTaGGTGACCAAATTTCAGTTATGGAACTCGCCTTGG +
Preference number: 6 (lower is better)
Translates to: GPCKHPRRGLPC*VTKFQLWNSPW
Trigger: CCAAGGCGAGTTCCATAACTGAAATTTGGTCACTCAACAAGGAAGTCCGCGTCTGGGATGCTTACACGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328843.10
ENST00000620169.4
CDS TCA 72 bp TCAGCGATGGTCTTTTCCCGGCTCACTTTCTCCGTCTaGAGGCCGATCTTTGTGATCAGAGCTTCGGCATCA +
Preference number: 6 (lower is better)
Translates to: SAMVFSRLTFSV*RPIFVIRASAS
Trigger: TGATGCCGAAGCTCTGATCACAAAGATCGGCCTTCAGACGGAGAAAGTGAGCCGGGAAAAGACCATCGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp CTCTACCAGTTTGGTGTCATCCAGAAAGCTTCCCTCTaGCGCAGAAAGGCGCAAAAGGAGATCGTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: LYQFGVIQKASL*RRKAQKEIVFQ
Trigger: CTGGAAGACGATCTCCTTTTGCGCCTTTCTGCGGCAGAGGGAAGCTTTCTGGATGACACCAAACTGGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS GCA 72 bp TTAGCACCATCCACGCCTCTGCATAAGAGGACCAAATaGCCTGATTTGCTCCGGACTGAGGGGTTTCTAGCA +
Preference number: 6 (lower is better)
Translates to: LAPSTPLHKRTK*PDLLRTEGFLA
Trigger: TGCTAGAAACCCCTCAGTCCGGAGCAAATCAGGGCATTTGGTCCTCTTATGCAGAGGCGTGGATGGTGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465593.1
CDS CCA 72 bp GCGATTAATATGCGTGTCTGTGGGAATTCCGTCTCCTaGAGACACTGGATGTGTCTCCTCAGAGGTCTCAGG +
Preference number: 6 (lower is better)
Translates to: AINMRVCGNSVS*RHWMCLLRGLR
Trigger: CCTGAGACCTCTGAGGAGACACATCCAGTGTCTCCAGGAGACGGAATTCCCACAGACACGCATATTAATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp GAGGAGGGCTTAGTGGGAGGTGATTGGATCATCAAGTaGGTGGATTTCCTCCTTGCTGTTCTCACGAGATCC +
Preference number: 6 (lower is better)
Translates to: EEGLVGGDWIIK*VDFLLAVLTRS
Trigger: GGATCTCGTGAGAACAGCAAGGAGGAAATCCACCCACTTGATGATCCAATCACCTCCCACTAAGCCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465129.1
CDS CAA 72 bp CTGGTGCTTTCCAGAAACTCCCCAAGAACCTGCCGGTaGTCCTCGCTTTCCAAATACTGGCTCCATTTCTCC +
Preference number: 6 (lower is better)
Translates to: LVLSRNSPRTCR*SSLSKYWLHFS
Trigger: GGAGAAATGGAGCCAGTATTTGGAAAGCGAGGACAACCGGCAGGTTCTTGGGGAGTTTCTGGAAAGCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000607050.1
ENST00000620169.4
CDS CAA 72 bp AGTGCAGCTGTAGCAGCCACCAGTGCAGGCTCAGCCTaGAGTAAGTCAGCTTCACATTCTCTCTGTTTCTGG +
Preference number: 6 (lower is better)
Translates to: SAAVAATSAGSA*SKSASHSLCFW
Trigger: CCAGAAACAGAGAGAATGTGAAGCTGACTTACTCAAGGCTGAGCCTGCACTGGTGGCTGCTACAGCTGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp TCCTGCCACCATGTGAAGAAGGTCCGTGCTTGCCCCTaGCCTTCCTCCATGATTGTCAGTTTCCTGAGTTCT +
Preference number: 6 (lower is better)
Translates to: SCHHVKKVRACP*PSSMIVSFLSS
Trigger: AGAACTCAGGAAACTGACAATCATGGAGGAAGGCAAGGGGCAAGCACGGACCTTCTTCACATGGTGGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465129.1
CDS CAA 90 bp AGGACCATCACGGCTGCAGTAACATTGGTAACTGCGATGGGAGGGTaGGGAAAGGCTTTCAGCTCACTGAGGTTGACCCTGTTGAGTGTA +
Preference number: 6 (lower is better)
Translates to: RTITAAVTLVTAMGG*GKAFSSLRLTLLSV
Trigger: TACACTCAACAGGGTCAACCTCAGTGAGCTGAAAGCCTTTCCCAACCCTCCCATCGCAGTTACCAATGTTACTGCAGCCGTGATGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 90 bp ATCTCTGCCACGGTGGTCTTTGTTGCCTCCAATCTCTCTACCAGTTaGGTGTCATCCAGAAAGCTTCCCTCTGCCGCAGAAAGGCGCAAA +
Preference number: 6 (lower is better)
Translates to: ISATVVFVASNLSTS*VSSRKLPSAAERRK
Trigger: TTTGCGCCTTTCTGCGGCAGAGGGAAGCTTTCTGGATGACACCAAACTGGTAGAGAGATTGGAGGCAACAAAGACCACCGTGGCAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS CAA 90 bp TTAGCACCATCCACGCCTCTGCATAAGAGGACCAAATGCCCTGATTaGCTCCGGACTGAGGGGTTTCTAGCAAGTGGATTTCAGGGATGT +
Preference number: 6 (lower is better)
Translates to: LAPSTPLHKRTKCPD*LRTEGFLASGFQGC
Trigger: ACATCCCTGAAATCCACTTGCTAGAAACCCCTCAGTCCGGAGCAAATCAGGGCATTTGGTCCTCTTATGCAGAGGCGTGGATGGTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465593.1
CDS TCA 72 bp CCCGGCTCACTTTCTCCGTCTGAAGGCCGATCTTTGTaGTCAGAGCTTCGGCATCATGATTTCTCAGTTGCA +
Preference number: 6 (lower is better)
Translates to: PGSLSPSEGRSL*SELRHHDFSVA
Trigger: TGCAACTGAGAAATCATGATGCCGAAGCTCTGATCACAAAGATCGGCCTTCAGACGGAGAAAGTGAGCCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp TTTCCTGTGCCTGCATTTCCAACTACAAAGACCGAGTaGCGCACAGCCAACAGTTCCTCAAGCTGGACAACT +
Preference number: 6 (lower is better)
Translates to: FPVPAFPTTKTE*RTANSSSSWTT
Trigger: AGTTGTCCAGCTTGAGGAACTGTTGGCTGTGCGGCACTCGGTCTTTGTAGTTGGAAATGCAGGCACAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp CACCTTGTGCTCTATCTCTGCCACGGTGGTCTTTGTTaGCTCCAATCTCTCTACCAGTTTGGTGTCATCCAG +
Preference number: 6 (lower is better)
Translates to: HLVLYLCHGGLC*LQSLYQFGVIQ
Trigger: CTGGATGACACCAAACTGGTAGAGAGATTGGAGGCAACAAAGACCACCGTGGCAGAGATAGAGCACAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS CCA 72 bp GGCTGGAAACAGGTCACCGACCAGGCCCAGAAACACTaGGATGTCGTCAGTCACTATTTTGGGCATATTGAA +
Preference number: 6 (lower is better)
Translates to: GWKQVTDQAQKH*DVVSHYFGHIE
Trigger: TTCAATATGCCCAAAATAGTGACTGACGACATCCCAGTGTTTCTGGGCCTGGTCGGTGACCTGTTTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp CCAGATCTTGTGGGTTCACATACAGAATACCAGCTCTaGAAACAGTGGCCGGGGTTGCGCTCCTTAAGTGAT +
Preference number: 6 (lower is better)
Translates to: PDLVGSHTEYQL*KQWPGLRSLSD
Trigger: ATCACTTAAGGAGCGCAACCCCGGCCACTGTTTCCAGAGCTGGTATTCTGTATGTGAACCCACAAGATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp TTCTCAGTTGCAGCTCGGCTTCTTGAGAGGCAAGTCTaGCTTTTAGATCTCCCACCTGAGAGGCTGTGGTTT +
Preference number: 6 (lower is better)
Translates to: FSVAARLLERQV*LLDLPPERLWF
Trigger: AAACCACAGCCTCTCAGGTGGGAGATCTAAAAGCCAGACTTGCCTCTCAAGAAGCCGAGCTGCAACTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp GATGTCACTGTCAGGAATTCTATTTCAGCATTTGGGTaGAGGCCATACAGTGCCGGGCTTTCTGGAGGAAGC +
Preference number: 6 (lower is better)
Translates to: DVTVRNSISAFG*RPYSAGLSGGS
Trigger: GCTTCCTCCAGAAAGCCCGGCACTGTATGGCCTCCACCCAAATGCTGAAATAGAATTCCTGACAGTGACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp GTTGGATGTCACTGTCAGGAATTCTATTTCAGCATTTaGGTGGAGGCCATACAGTGCCGGGCTTTCTGGAGG +
Preference number: 6 (lower is better)
Translates to: VGCHCQEFYFSI*VEAIQCRAFWR
Trigger: CCTCCAGAAAGCCCGGCACTGTATGGCCTCCACCCAAATGCTGAAATAGAATTCCTGACAGTGACATCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp GCAGTGTTTCTGGGTATCCTCCCATCGGTGACGAAGTaGAGACAGCCATGTAAAAGCTTGGGGACTGACAAC +
Preference number: 6 (lower is better)
Translates to: AVFLGILPSVTK*RQPCKSLGTDN
Trigger: GTTGTCAGTCCCCAAGCTTTTACATGGCTGTCTCAACTTCGTCACCGATGGGAGGATACCCAGAAACACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp ACGGTGGTCTTTGTTGCCTCCAATCTCTCTACCAGTTaGGTGTCATCCAGAAAGCTTCCCTCTGCCGCAGAA +
Preference number: 6 (lower is better)
Translates to: TVVFVASNLSTS*VSSRKLPSAAE
Trigger: TTCTGCGGCAGAGGGAAGCTTTCTGGATGACACCAAACTGGTAGAGAGATTGGAGGCAACAAAGACCACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS CAA 90 bp TCTAGAACCTGGGCATCTGTCAGCAGGAACACAGTGGGCATGTTCTaGGCTCCAGTTCGGATGTACAAATTGGCAAGATCTACCCGAAGT +
Preference number: 6 (lower is better)
Translates to: SRTWASVSRNTVGMF*APVRMYKLARSTRS
Trigger: ACTTCGGGTAGATCTTGCCAATTTGTACATCCGAACTGGAGCCAAGAACATGCCCACTGTGTTCCTGCTGACAGATGCCCAGGTTCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp TCAACAAAATCTGAAAAGCCATCTGGGACAGGAAGGTaGGCTTGTCCTTCTCAAACAGCGCCTGGCTGGTGT +
Preference number: 6 (lower is better)
Translates to: STKSEKPSGTGR*ACPSQTAPGWC
Trigger: ACACCAGCCAGGCGCTGTTTGAGAAGGACAAGCTCACCTTCCTGTCCCAGATGGCTTTTCAGATTTTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp ATACTGCCTTGTGAAGGGTCCGACGTAAGACACAAATaGCGCCGTGAGAAGAACATCTCCACAGAGTGTCTT +
Preference number: 6 (lower is better)
Translates to: ILPCEGSDVRHK*RREKNISTECL
Trigger: AAGACACTCTGTGGAGATGTTCTTCTCACGGCGGCATTTGTGTCTTACGTCGGACCCTTCACAAGGCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp CATCTAGAACCTGGGCATCTGTCAGCAGGAACACAGTaGGCATGTTCTTGGCTCCAGTTCGGATGTACAAAT +
Preference number: 6 (lower is better)
Translates to: HLEPGHLSAGTQ*ACSWLQFGCTN
Trigger: ATTTGTACATCCGAACTGGAGCCAAGAACATGCCCACTGTGTTCCTGCTGACAGATGCCCAGGTTCTAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp TGGCTTCAATCACCTTGTGCTCTATCTCTGCCACGGTaGTCTTTGTTGCCTCCAATCTCTCTACCAGTTTGG +
Preference number: 6 (lower is better)
Translates to: WLQSPCALSLPR*SLLPPISLPVW
Trigger: CCAAACTGGTAGAGAGATTGGAGGCAACAAAGACCACCGTGGCAGAGATAGAGCACAAGGTGATTGAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS CAA 72 bp TCACCTTGTGCTCTATCTCTGCCACGGTGGTCTTTGTaGCCTCCAATCTCTCTACCAGTTTGGTGTCATCCA +
Preference number: 6 (lower is better)
Translates to: SPCALSLPRWSL*PPISLPVWCHP
Trigger: TGGATGACACCAAACTGGTAGAGAGATTGGAGGCAACAAAGACCACCGTGGCAGAGATAGAGCACAAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS CAA 90 bp AGTGTATTGAGTGCAGCTGTAGCAGCCACCAGTGCAGGCTCAGCCTaGAGTAAGTCAGCTTCACATTCTCTCTGTTTCTGGAACACTTCA +
Preference number: 6 (lower is better)
Translates to: SVLSAAVAATSAGSA*SKSASHSLCFWNTS
Trigger: TGAAGTGTTCCAGAAACAGAGAGAATGTGAAGCTGACTTACTCAAGGCTGAGCCTGCACTGGTGGCTGCTACAGCTGCACTCAATACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 90 bp TGGCTTCAATCACCTTGTGCTCTATCTCTGCCACGGTGGTCTTTGTaGCCTCCAATCTCTCTACCAGTTTGGTGTCATCCAGAAAGCTTC +
Preference number: 6 (lower is better)
Translates to: WLQSPCALSLPRWSL*PPISLPVWCHPESF
Trigger: GAAGCTTTCTGGATGACACCAAACTGGTAGAGAGATTGGAGGCAACAAAGACCACCGTGGCAGAGATAGAGCACAAGGTGATTGAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS CAA 90 bp CTTTGGCTTCAATCACCTTGTGCTCTATCTCTGCCACGGTGGTCTTaGTTGCCTCCAATCTCTCTACCAGTTTGGTGTCATCCAGAAAGC +
Preference number: 6 (lower is better)
Translates to: LWLQSPCALSLPRWS*LPPISLPVWCHPES
Trigger: GCTTTCTGGATGACACCAAACTGGTAGAGAGATTGGAGGCAACAAAGACCACCGTGGCAGAGATAGAGCACAAGGTGATTGAAGCCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS CAA 90 bp GAGCCAGCCATATGGGTTGCAGGAAAGCCATTTTCTTTCCGGCTTTaGCTAAGAATATCCAGAATCTGCTTCTTGGAAGCTGCCACCCTC +
Preference number: 6 (lower is better)
Translates to: EPAIWVAGKPFSFRL*LRISRICFLEAATL
Trigger: GAGGGTGGCAGCTTCCAAGAAGCAGATTCTGGATATTCTTAGCAAAAGCCGGAAAGAAAATGGCTTTCCTGCAACCCATATGGCTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465593.1
CDS TCA 72 bp TGTTGCCTGGATCAAAGTGGGGCCACTCCTGAGAATTaGTGGAGCAAATGCTTGCTGTTGGAAATGGAAGCT +
Preference number: 6 (lower is better)
Translates to: CCLDQSGATPEN*WSKCLLLEMEA
Trigger: AGCTTCCATTTCCAACAGCAAGCATTTGCTCCATCAATTCTCAGGAGTGGCCCCACTTTGATCCAGGCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp TTTATTAAAAACTTGACCCCAATAGCTTTCATCAGCTaGTGCCAATGCCTGTCCCTGAGGGCAGGGCTCTGT +
Preference number: 6 (lower is better)
Translates to: FIKNLTPIAFIS*CQCLSLRAGLC
Trigger: ACAGAGCCCTGCCCTCAGGGACAGGCATTGGCACCAGCTGATGAAAGCTATTGGGGTCAAGTTTTTAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp TCTGGCCTTTCAATACTGACAACCTCTGCCAGCAGCTaGGCTTCTAGACCATCTTCTGTGACTGTGAAATTG +
Preference number: 6 (lower is better)
Translates to: SGLSILTTSASS*ASRPSSVTVKL
Trigger: CAATTTCACAGTCACAGAAGATGGTCTAGAAGCCCAGCTGCTGGCAGAGGTTGTCAGTATTGAAAGGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp CAATCACCTTGTGCTCTATCTCTGCCACGGTGGTCTTaGTTGCCTCCAATCTCTCTACCAGTTTGGTGTCAT +
Preference number: 6 (lower is better)
Translates to: QSPCALSLPRWS*LPPISLPVWCH
Trigger: ATGACACCAAACTGGTAGAGAGATTGGAGGCAACAAAGACCACCGTGGCAGAGATAGAGCACAAGGTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS CAA 90 bp CTCGTAGGCCACTATGGCTTCTGTTATAGAATGACGCACCGTTTCTaGCATAGTCTGTTCAAGTTGCAGAAGCCATGTTTCCACATGGCC +
Preference number: 6 (lower is better)
Translates to: LVGHYGFCYRMTHRF*HSLFKLQKPCFHMA
Trigger: GGCCATGTGGAAACATGGCTTCTGCAACTTGAACAGACTATGCAAGAAACGGTGCGTCATTCTATAACAGAAGCCATAGTGGCCTACGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 90 bp AGTGCATTCCTGGGCTGCATCTCCAGCAAAGTTCTGAAGAGAGTGTaGGATGTCACTGTCAGGAATTCTATTTCAGCATTTGGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: SAFLGCISSKVLKRV*DVTVRNSISAFGWR
Trigger: CCTCCACCCAAATGCTGAAATAGAATTCCTGACAGTGACATCCAACACTCTCTTCAGAACTTTGCTGGAGATGCAGCCCAGGAATGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 90 bp CACAAATGCCGCCGTGAGAAGAACATCTCCACAGAGTGTCTTCTCTaGAGCTTCAAAGGACTTAATGGATTGACCCCAGCGAATCTTCTT +
Preference number: 6 (lower is better)
Translates to: HKCRREKNISTECLL*SFKGLNGLTPANLL
Trigger: AAGAAGATTCGCTGGGGTCAATCCATTAAGTCCTTTGAAGCTCAAGAGAAGACACTCTGTGGAGATGTTCTTCTCACGGCGGCATTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp CTGTACATTCCAACTGCCCTGTGTGCAGAAACATCCTaGTTGTCTTCAAACTGCAGATCTGCAATGCTGTCG +
Preference number: 6 (lower is better)
Translates to: LYIPTALCAETS*LSSNCRSAMLS
Trigger: CGACAGCATTGCAGATCTGCAGTTTGAAGACAATCAGGATGTTTCTGCACACAGGGCAGTTGGAATGTACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp GTGGTCCACCATATTTGTGAGCTGGTTAGTGCAACCTaGGCTGGGAAATCAAAAATCCACAGTTCCCTAGGT +
Preference number: 6 (lower is better)
Translates to: VVHHICELVSAT*AGKSKIHSSLG
Trigger: ACCTAGGGAACTGTGGATTTTTGATTTCCCAGCTCAGGTTGCACTAACCAGCTCACAAATATGGTGGACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp CCTTCAGGGCTGTTTCGTAGCCTTCTTCCAGTCTACTaGAGGCTATTCCTACATCTGTGGTCCACCATATTT +
Preference number: 6 (lower is better)
Translates to: PSGLFRSLLPVY*RLFLHLWSTIF
Trigger: AAATATGGTGGACCACAGATGTAGGAATAGCCTTCAGTAGACTGGAAGAAGGCTACGAAACAGCCCTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp CGTCTCTGGCATGGACATCTATGGTACAAATTGTCATaGTCTTCTGTCTGTCTCCAGGTGGAAGTTCTCCCA +
Preference number: 6 (lower is better)
Translates to: RLWHGHLWYKLS*SSVCLQVEVLP
Trigger: TGGGAGAACTTCCACCTGGAGACAGACAGAAGATCATGACAATTTGTACCATAGATGTCCATGCCAGAGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp ATCTCATGTCAAATTAGAGGAGGGCTTAGTGGGAGGTaGTTGGATCATCAAGTGGGTGGATTTCCTCCTTGC +
Preference number: 6 (lower is better)
Translates to: ISCQIRGGLSGR*LDHQVGGFPPC
Trigger: GCAAGGAGGAAATCCACCCACTTGATGATCCAATCACCTCCCACTAAGCCCTCCTCTAATTTGACATGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465129.1
CDS TCA 72 bp CTGGATCATGAGCAGATGGTGATATTGATGCCAGGCTaGGGAACAAGAGTCTTACCATTTTCCACAGCCAGA +
Preference number: 6 (lower is better)
Translates to: LDHEQMVILMPG*GTRVLPFSTAR
Trigger: TCTGGCTGTGGAAAATGGTAAGACTCTTGTTCCTCAGCCTGGCATCAATATCACCATCTGCTCATGATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483691.1
CDS GCA 72 bp CAGCAGAAGAGACGAAATAGAAGCGAGGAAAGGCTATaGGCTTGGTTTCCAGGTATTCAGCGAGAGCTTTTT +
Preference number: 6 (lower is better)
Translates to: QQKRRNRSEERL*AWFPGIQRELF
Trigger: AAAAAGCTCTCGCTGAATACCTGGAAACCAAGCGCATAGCCTTTCCTCGCTTCTATTTCGTCTCTTCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp TGTTGTGTGAACGAGAACTGTCTGCAGAGGCACATCTaGATCCATAGTAAACTGGGCAATTTTGTCAGCCCA +
Preference number: 6 (lower is better)
Translates to: CCVNENCLQRHI*IHSKLGNFVSP
Trigger: TGGGCTGACAAAATTGCCCAGTTTACTATGGATCCAGATGTGCCTCTGCAGACAGTTCTCGTTCACACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp CATGTCAAATTAGAGGAGGGCTTAGTGGGAGGTGATTaGATCATCAAGTGGGTGGATTTCCTCCTTGCTGTT +
Preference number: 6 (lower is better)
Translates to: HVKLEEGLVGGD*IIKWVDFLLAV
Trigger: AACAGCAAGGAGGAAATCCACCCACTTGATGATCCAATCACCTCCCACTAAGCCCTCCTCTAATTTGACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465129.1
CDS CAA 72 bp TCACACTCGGCTTGGAATGGGACATACTCCTTTTCTTaGCTGTACATTCCAACTGCCCTGTGTGCAGAAACA +
Preference number: 6 (lower is better)
Translates to: SHSAWNGTYSFS*LYIPTALCAET
Trigger: TGTTTCTGCACACAGGGCAGTTGGAATGTACAGCAAAGAAAAGGAGTATGTCCCATTCCAAGCCGAGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp AGAATGACGCACCGTTTCTTGCATAGTCTGTTCAAGTaGCAGAAGCCATGTTTCCACATGGCCCACACATTC +
Preference number: 6 (lower is better)
Translates to: RMTHRFLHSLFK*QKPCFHMAHTF
Trigger: GAATGTGTGGGCCATGTGGAAACATGGCTTCTGCAACTTGAACAGACTATGCAAGAAACGGTGCGTCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp GACCCAAACTCACTCATGTCTCCTGTAAGTGAAGAGTaGAGCCAGCCATATGGGTTGCAGGAAAGCCATTTT +
Preference number: 6 (lower is better)
Translates to: DPNSLMSPVSEE*SQPYGLQESHF
Trigger: AAAATGGCTTTCCTGCAACCCATATGGCTGGCTCAACTCTTCACTTACAGGAGACATGAGTGAGTTTGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465593.1
CDS CAA 90 bp CGTGATCAGGATTGCCCAAAAATAGATAACGGAGAGATGCGAAGTTaGACCAAAACATTTGAAGTCGTTGGAGAACCTGCTGGGCCCATT +
Preference number: 6 (lower is better)
Translates to: RDQDCPKIDNGEMRS*TKTFEVVGEPAGPI
Trigger: AATGGGCCCAGCAGGTTCTCCAACGACTTCAAATGTTTTGGTCAAACTTCGCATCTCTCCGTTATCTATTTTTGGGCAATCCTGATCACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 90 bp ATTAACAAAGCAGTGTTTCTGGGTATCCTCCCATCGGTGACGAAGTaGAGACAGCCATGTAAAAGCTTGGGGACTGACAACCACTTTCTT +
Preference number: 6 (lower is better)
Translates to: INKAVFLGILPSVTK*RQPCKSLGTDNHFL
Trigger: AAGAAAGTGGTTGTCAGTCCCCAAGCTTTTACATGGCTGTCTCAACTTCGTCACCGATGGGAGGATACCCAGAAACACTGCTTTGTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328843.10
CDS CAA 90 bp ATTAACAAAGCAGTGTTTCTGGGTATCCTCCCATCGGTGACGAAGTaGAGACAGCCATGTAAAAGCTTGGGGACTGACAACAACTTGCTT +
Preference number: 6 (lower is better)
Translates to: INKAVFLGILPSVTK*RQPCKSLGTDNNLL
Trigger: AAGCAAGTTGTTGTCAGTCCCCAAGCTTTTACATGGCTGTCTCAACTTCGTCACCGATGGGAGGATACCCAGAAACACTGCTTTGTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620169.4
CDS TCA 72 bp GCTCAGGCATCTTCTGGCCATAGCTTTCCAAGAGGGTaGTCGTTTCTTTTAGAGGTTCAAAGAGTTCATCAG +
Preference number: 6 (lower is better)
Translates to: AQASSGHSFPRG*SFLLEVQRVHQ
Trigger: CTGATGAACTCTTTGAACCTCTAAAAGAAACGATCACCCTCTTGGAAAGCTATGGCCAGAAGATGCCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp TTGTTGATGACATTCACCACTCTGTTCATGATCTCCTaGCTGACCTCTGCCAGGCCTAACATGTTATCCATA +
Preference number: 6 (lower is better)
Translates to: LLMTFTTLFMIS*LTSARPNMLSI
Trigger: TATGGATAACATGTTAGGCCTGGCAGAGGTCAGGCAGGAGATCATGAACAGAGTGGTGAATGTCATCAACAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp ATTTTCTTTGGCTTCAATCACCTTGTGCTCTATCTCTaGCACGGTGGTCTTTGTTGCCTCCAATCTCTCTAC +
Preference number: 6 (lower is better)
Translates to: IFFGFNHLVLYL*HGGLCCLQSLY
Trigger: GTAGAGAGATTGGAGGCAACAAAGACCACCGTGGCAGAGATAGAGCACAAGGTGATTGAAGCCAAAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000421290.1
ENST00000607413.5
ENST00000620169.4
CDS CCA 72 bp ATAAGTAGAAGGATAAGCCAGTTTGCTCCAAGTGTCTaGTACCGTGTCATAACTCAATGCAAACTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: ISRRISQFAPSV*YRVITQCKLLG
Trigger: GCCCAGCAGTTTGCATTGAGTTATGACACGGTACCAGACACTTGGAGCAAACTGGCTTATCCTTCTACTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000479878.1
ENST00000620169.4
CDS CAA 72 bp CCATCGGTGACGAAGTTGAGACAGCCATGTAAAAGCTaGGGGACTGACAACCACTTTCTTCTGAGAAATAAG +
Preference number: 6 (lower is better)
Translates to: PSVTKLRQPCKS*GTDNHFLLRNK
Trigger: CTTATTTCTCAGAAGAAAGTGGTTGTCAGTCCCCAAGCTTTTACATGGCTGTCTCAACTTCGTCACCGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328843.10
CDS CAA 72 bp CCATCGGTGACGAAGTTGAGACAGCCATGTAAAAGCTaGGGGACTGACAACAACTTGCTTCTGAGAAATAAG +
Preference number: 6 (lower is better)
Translates to: PSVTKLRQPCKS*GTDNNLLLRNK
Trigger: CTTATTTCTCAGAAGCAAGTTGTTGTCAGTCCCCAAGCTTTTACATGGCTGTCTCAACTTCGTCACCGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620169.4
CDS TCA 72 bp CGATCAAGAAACTTGTCAAATCTGCAAAACACCAGATaGGACTGGAAATCCCATGGTCTCAGCTTTCTTCCC +
Preference number: 6 (lower is better)
Translates to: RSRNLSNLQNTR*DWKSHGLSFLP
Trigger: GGGAAGAAAGCTGAGACCATGGGATTTCCAGTCTCATCTGGTGTTTTGCAGATTTGACAAGTTTCTTGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000496218.1
ENST00000620169.4
CDS TCA 72 bp TTGTATCATCATAGCATTGGCCTGCTGAGCTCCTTATaGGAATCACTGAGAAAGGAGACCTCCACCTATGAT +
Preference number: 6 (lower is better)
Translates to: LYHHSIGLLSSL*ESLRKETSTYD
Trigger: ATCATAGGTGGAGGTCTCCTTTCTCAGTGATTCTCATAAGGAGCTCAGCAGGCCAATGCTATGATGATACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496218.1
CDS GCA 72 bp TCAGACAGATGGTATGAAATAATGGAGCGATTAATATaGGTGTCTGTGGGAATTCCGTCTCCTGGAGACACT +
Preference number: 6 (lower is better)
Translates to: SDRWYEIMERLI*VSVGIPSPGDT
Trigger: AGTGTCTCCAGGAGACGGAATTCCCACAGACACGCATATTAATCGCTCCATTATTTCATACCATCTGTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp CTCAAGAGTTGGTGGTTGTTCGGGAATTTCTTCATTTaGATGAGCATCCATTTCATCGGAAGACACAGCATG +
Preference number: 6 (lower is better)
Translates to: LKSWWLFGNFFI*MSIHFIGRHSM
Trigger: CATGCTGTGTCTTCCGATGAAATGGATGCTCATGCAAATGAAGAAATTCCCGAACAACCACCAACTCTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp ATAATCAAAGATTGTTCCCTGCGACGGAAATTTCACTaGTTTCATCTCTTTCTGCCACCACCGACTGAAGTC +
Preference number: 6 (lower is better)
Translates to: IIKDCSLRRKFH*FHLFLPPPTEV
Trigger: GACTTCAGTCGGTGGTGGCAGAAAGAGATGAAAGCAGTGAAATTTCCGTCGCAGGGAACAATCTTTGATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp TTTAATGATGTTGATGACCCAGGCACACAGGCCAGCTaGTGCAAAAGATTTGGTTCGAATCAGGTTTGGATT +
Preference number: 6 (lower is better)
Translates to: FNDVDDPGTQAS*CKRFGSNQVWI
Trigger: AATCCAAACCTGATTCGAACCAAATCTTTTGCAGCAGCTGGCCTGTGTGCCTGGGTCATCAACATCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp CTCCATGATTGTCAGTTTCCTGAGTTCTCCCAGTCATaGTTCCTGTTAAGCCTGATCTTCGGGTCTATTTTT +
Preference number: 6 (lower is better)
Translates to: LHDCQFPEFSQS*FLLSLIFGSIF
Trigger: AAAAATAGACCCGAAGATCAGGCTTAACAGGAAGCATGACTGGGAGAACTCAGGAAACTGACAATCATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465129.1
CDS CCA 72 bp AAGAGACGAAATAGAAGCGAGGAAAGGCTATGCGCTTaGTTTCCAGGTATTCAGCGAGAGCTTTTTCACAAA +
Preference number: 6 (lower is better)
Translates to: KRRNRSEERLCA*FPGIQRELFHK
Trigger: TTTGTGAAAAAGCTCTCGCTGAATACCTGGAAACCAAGCGCATAGCCTTTCCTCGCTTCTATTTCGTCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp CTATTCCTACATCTGTGGTCCACCATATTTGTGAGCTaGTTAGTGCAACCTGAGCTGGGAAATCAAAAATCC +
Preference number: 6 (lower is better)
Translates to: LFLHLWSTIFVS*LVQPELGNQKS
Trigger: GGATTTTTGATTTCCCAGCTCAGGTTGCACTAACCAGCTCACAAATATGGTGGACCACAGATGTAGGAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp TGGGTCTCCAGGGTGTTTCTGAAATCTAAGACTTTGTaGATGACATTCACCACTCTGTTCATGATCTCCTGC +
Preference number: 6 (lower is better)
Translates to: WVSRVFLKSKTL*MTFTTLFMISC
Trigger: GCAGGAGATCATGAACAGAGTGGTGAATGTCATCAACAAAGTCTTAGATTTCAGAAACACCCTGGAGACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp GCTCAAGAGTTGGTGGTTGTTCGGGAATTTCTTCATTaGCATGAGCATCCATTTCATCGGAAGACACAGCAT +
Preference number: 6 (lower is better)
Translates to: AQELVVVREFLH*HEHPFHRKTQH
Trigger: ATGCTGTGTCTTCCGATGAAATGGATGCTCATGCAAATGAAGAAATTCCCGAACAACCACCAACTCTTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp GGTGAGACTTCATGTCTGACAGTTGCTGCGATCTTTTaGGTAGTTTCCCATCTTTCAGGTAATTCCTCTAGC +
Preference number: 6 (lower is better)
Translates to: GETSCLTVAAIF*VVSHLSGNSSS
Trigger: GCTAGAGGAATTACCTGAAAGATGGGAAACTACCAAAAAGATCGCAGCAACTGTCAGACATGAAGTCTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp AGGCCCAGAAACACTGGGATGTCGTCAGTCACTATTTaGGGCATATTGAAATCCCTTAATGCTCTCATGAGT +
Preference number: 6 (lower is better)
Translates to: RPRNTGMSSVTI*GILKSLNALMS
Trigger: ACTCATGAGAGCATTAAGGGATTTCAATATGCCCAAAATAGTGACTGACGACATCCCAGTGTTTCTGGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp AAGGCACACGGGATACTATGTAATCCTCAGAGAGACTaGCCAATGTGTCACCTACAAAGACTGTTTTTCCCA +
Preference number: 6 (lower is better)
Translates to: KAHGILCNPQRD*PMCHLQRLFFP
Trigger: TGGGAAAAACAGTCTTTGTAGGTGACACATTGGCAAGTCTCTCTGAGGATTACATAGTATCCCGTGTGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000605912.1
ENST00000620169.4
CDS CAA 72 bp CTGGGCTGCATCTCCAGCAAAGTTCTGAAGAGAGTGTaGGATGTCACTGTCAGGAATTCTATTTCAGCATTT +
Preference number: 6 (lower is better)
Translates to: LGCISSKVLKRV*DVTVRNSISAF
Trigger: AAATGCTGAAATAGAATTCCTGACAGTGACATCCAACACTCTCTTCAGAACTTTGCTGGAGATGCAGCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp CATAAATTTTCCAGGTATCCAGAGAGGGATTGGCTTTaGAGAGCTTCCTATTTTCCTCGACCAAGTTGTGGA +
Preference number: 6 (lower is better)
Translates to: HKFSRYPERDWL*RASYFPRPSCG
Trigger: TCCACAACTTGGTCGAGGAAAATAGGAAGCTCTTCAAAGCCAATCCCTCTCTGGATACCTGGAAAATTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp CTCTCTGTCGGCTTCTTACAGCCAGAAGATGCACCATaGTGTCAACTAAACCATCATGATCACCTTCATTTA +
Preference number: 6 (lower is better)
Translates to: LSVGFLQPEDAP*CQLNHHDHLHL
Trigger: TAAATGAAGGTGATCATGATGGTTTAGTTGACATCATGGTGCATCTTCTGGCTGTAAGAAGCCGACAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp GAATTCCAGAAATTATCTTGTCCACATCTTCATCGCTaGACAGATCTGGGATTTCTCCTGATGCCAGCAAGT +
Preference number: 6 (lower is better)
Translates to: EFQKLSCPHLHR*TDLGFLLMPAS
Trigger: ACTTGCTGGCATCAGGAGAAATCCCAGATCTGTTCAGCGATGAAGATGTGGACAAGATAATTTCTGGAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp TCTGGAAGAGCCACTTCAAAAAGACGAGTAGATTCTTaGATCTGCAACATTTCTTCTTCTAAGGCCTCAAGC +
Preference number: 6 (lower is better)
Translates to: SGRATSKRRVDS*ICNISSSKASS
Trigger: GCTTGAGGCCTTAGAAGAAGAAATGTTGCAGATGCAAGAATCTACTCGTCTTTTTGAAGTGGCTCTTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp TGCAGAAACATCCTGATTGTCTTCAAACTGCAGATCTaGAATGCTGTCGAAAAGTTTGGCAAGGTGACATGT +
Preference number: 6 (lower is better)
Translates to: CRNILIVFKLQI*NAVEKFGKVTC
Trigger: ACATGTCACCTTGCCAAACTTTTCGACAGCATTGCAGATCTGCAGTTTGAAGACAATCAGGATGTTTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp AAATCTGCAAAACACCAGATGAGACTGGAAATCCCATaGTCTCAGCTTTCTTCCCATAAAGTAGCTTGCCAA +
Preference number: 6 (lower is better)
Translates to: KSAKHQMRLEIP*SQLSSHKVACQ
Trigger: TTGGCAAGCTACTTTATGGGAAGAAAGCTGAGACCATGGGATTTCCAGTCTCATCTGGTGTTTTGCAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000496218.1
ENST00000620169.4
CDS CCA 72 bp CTCAAGCTCTTCATTTGCCTTATCAAGCGCTGTGTATaGATTTTCTGCATTAAATCCAAGAGGGGCATAGTG +
Preference number: 6 (lower is better)
Translates to: LKLFICLIKRCV*IFCIKSKRGIV
Trigger: CACTATGCCCCTCTTGGATTTAATGCAGAAAATCCATACACAGCGCTTGATAAGGCAAATGAAGAGCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp TTGTTGAGTGACCAAATTTCAGTTATGGAACTCGCCTaGGCAAACCTTCTGAGTTCTACATCCATCTGTTCC +
Preference number: 6 (lower is better)
Translates to: LLSDQISVMELA*ANLLSSTSICS
Trigger: GGAACAGATGGATGTAGAACTCAGAAGGTTTGCCAAGGCGAGTTCCATAACTGAAATTTGGTCACTCAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328843.10
ENST00000620169.4
CDS CAA 72 bp CACTATGGCTTCTGTTATAGAATGACGCACCGTTTCTaGCATAGTCTGTTCAAGTTGCAGAAGCCATGTTTC +
Preference number: 6 (lower is better)
Translates to: HYGFCYRMTHRF*HSLFKLQKPCF
Trigger: GAAACATGGCTTCTGCAACTTGAACAGACTATGCAAGAAACGGTGCGTCATTCTATAACAGAAGCCATAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp AGAGGCACATCTGGATCCATAGTAAACTGGGCAATTTaGTCAGCCCAGGGCAATAATTTCTTAGTTTTGTGG +
Preference number: 6 (lower is better)
Translates to: RGTSGSIVNWAI*SAQGNNFLVLW
Trigger: CCACAAAACTAAGAAATTATTGCCCTGGGCTGACAAAATTGCCCAGTTTACTATGGATCCAGATGTGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp CAATCAGAGGGTATTCAACTTCCAGGAGCGTCTGTTTaGGTTTATTATACCCTTGCACAAGAAGGTCAAGAT +
Preference number: 6 (lower is better)
Translates to: QSEGIQLPGASV*VYYTLAQEGQD
Trigger: ATCTTGACCTTCTTGTGCAAGGGTATAATAAACTCAAACAGACGCTCCTGGAAGTTGAATACCCTCTGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp GCAAACCTTCTGAGTTCTACATCCATCTGTTCCACATaGATCTGTCTCCACTGGGTTTTAGTCCAATTATCA +
Preference number: 6 (lower is better)
Translates to: ANLLSSTSICST*ICLHWVLVQLS
Trigger: TGATAATTGGACTAAAACCCAGTGGAGACAGATTCATGTGGAACAGATGGATGTAGAACTCAGAAGGTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp AAATTTCAGTTATGGAACTCGCCTTGGCAAACCTTCTaGGTTCTACATCCATCTGTTCCACATGAATCTGTC +
Preference number: 6 (lower is better)
Translates to: KFQLWNSPWQTF*VLHPSVPHESV
Trigger: GACAGATTCATGTGGAACAGATGGATGTAGAACTCAGAAGGTTTGCCAAGGCGAGTTCCATAACTGAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328843.10
ENST00000620169.4
CDS TCA 72 bp TTAATAGCCGTGGGTAAAAAGTTACACATCATTGTCTaGTGGAATGCTATTGTTGCCTGGATCAAAGTGGGG +
Preference number: 6 (lower is better)
Translates to: LIAVGKKLHIIV*WNAIVAWIKVG
Trigger: CCCCACTTTGATCCAGGCAACAATAGCATTCCATCAGACAATGATGTGTAACTTTTTACCCACGGCTATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp ACAAAGGGTGAGATGAATTTATCATTAGAAGAGCCATaGGCAATCACTCCACAAACATGGCGGAAGGGTAAA +
Preference number: 6 (lower is better)
Translates to: TKGEMNLSLEEP*AITPQTWRKGK
Trigger: TTTACCCTTCCGCCATGTTTGTGGAGTGATTGCTCATGGCTCTTCTAATGATAAATTCATCTCACCCTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483691.1
CDS GCA 72 bp AAACATCCTGATTGTCTTCAAACTGCAGATCTGCAATaGTGTCGAAAAGTTTGGCAAGGTGACATGTTACCT +
Preference number: 6 (lower is better)
Translates to: KHPDCLQTADLQ*CRKVWQGDMLP
Trigger: AGGTAACATGTCACCTTGCCAAACTTTTCGACAGCATTGCAGATCTGCAGTTTGAAGACAATCAGGATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp ATATCGCCATCCAGGACTATCCATTTTGGTCCATCATaGTTAAGATTTGCTTGTTCTCGTAGAATGGATGAG +
Preference number: 6 (lower is better)
Translates to: ISPSRTIHFGPS*LRFACSRRMDE
Trigger: CTCATCCATTCTACGAGAACAAGCAAATCTTAAGCATGATGGACCAAAATGGATAGTCCTGGATGGCGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp CTCATCTCGTGGACTTGTCCATTTAAAATTGCTCCTTaGGTACCACCAAATTCCAGTCTTTCCAGCTTTTCA +
Preference number: 6 (lower is better)
Translates to: LISWTCPFKIAP*VPPNSSLSSFS
Trigger: TGAAAAGCTGGAAAGACTGGAATTTGGTGGTACCAAAGGAGCAATTTTAAATGGACAAGTCCACGAGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp GATTGCCCAAAAATAGATAACGGAGAGATGCGAAGTTaGACCAAAACATTTGAAGTCGTTGGAGAACCTGCT +
Preference number: 6 (lower is better)
Translates to: DCPKIDNGEMRS*TKTFEVVGEPA
Trigger: AGCAGGTTCTCCAACGACTTCAAATGTTTTGGTCAAACTTCGCATCTCTCCGTTATCTATTTTTGGGCAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp TCAATCAGAGGGTATTCAACTTCCAGGAGCGTCTGTTaGAGTTTATTATACCCTTGCACAAGAAGGTCAAGA +
Preference number: 6 (lower is better)
Translates to: SIRGYSTSRSVC*SLLYPCTRRSR
Trigger: TCTTGACCTTCTTGTGCAAGGGTATAATAAACTCAAACAGACGCTCCTGGAAGTTGAATACCCTCTGATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 90 bp AGCTCATCTTCAATCAGAGGGTATTCAACTTCCAGGAGCGTCTGTTaGAGTTTATTATACCCTTGCACAAGAAGGTCAAGATTTCCAATG +
Preference number: 6 (lower is better)
Translates to: SSSSIRGYSTSRSVC*SLLYPCTRRSRFPM
Trigger: CATTGGAAATCTTGACCTTCTTGTGCAAGGGTATAATAAACTCAAACAGACGCTCCTGGAAGTTGAATACCCTCTGATTGAAGATGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 90 bp CCACAGTCCCTTGAGCAATTTTATTTCTTTGCGACACTGTTTCATTaGTTTGTACTCTGGAAGAGCCACTTCAAAAAGACGAGTAGATTC +
Preference number: 6 (lower is better)
Translates to: PQSLEQFYFFATLFH*FVLWKSHFKKTSRF
Trigger: GAATCTACTCGTCTTTTTGAAGTGGCTCTTCCAGAGTACAAACAAATGAAACAGTGTCGCAAAGAAATAAAATTGCTCAAGGGACTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 90 bp AAGCCCAGATACAAGCAAATACAAAATAGACTTCATAAACTTCTTTaGGGCTGTCAGAAGGTACATTTTCAGGAGTCAGCAAGCACTCCA +
Preference number: 6 (lower is better)
Translates to: KPRYKQIQNRLHKLL*GCQKVHFQESASTP
Trigger: TGGAGTGCTTGCTGACTCCTGAAAATGTACCTTCTGACAGCCCAAAAGAAGTTTATGAAGTCTATTTTGTATTTGCTTGTATCTGGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 90 bp AAGGAGATCGTCTTCCAGATACTTGAGCTCAATTTTAAAATCATTTaGGTGCTTTGTCAATACCAACTCCAGGAAATGCCATCCGGTTCT +
Preference number: 6 (lower is better)
Translates to: KEIVFQILELNFKII*VLCQYQLQEMPSGS
Trigger: AGAACCGGATGGCATTTCCTGGAGTTGGTATTGACAAAGCACCAAAATGATTTTAAAATTGAGCTCAAGTATCTGGAAGACGATCTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421290.1
CDS TCA 72 bp AGCATAACCCGGGTTCATAGTAATAAATATTCCAACTaGTGGCTTCAGTGTGATAGCTTCCCCAAGAAATAC +
Preference number: 6 (lower is better)
Translates to: SITRVHSNKYSN*WLQCDSFPKKY
Trigger: GTATTTCTTGGGGAAGCTATCACACTGAAGCCATCAGTTGGAATATTTATTACTATGAACCCGGGTTATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp TGTTCGATAGTGAACTTCGTAAGAAAACTTCATGGTTaGCCAGGTCTGACTGATTTCAGTAATAACCTTCTC +
Preference number: 6 (lower is better)
Translates to: CSIVNFVRKLHG*PGLTDFSNNLL
Trigger: GAGAAGGTTATTACTGAAATCAGTCAGACCTGGGCAACCATGAAGTTTTCTTACGAAGTTCACTATCGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000465593.1
ENST00000620169.4
CDS CCA 72 bp GCCAGCTGCTGCAAAAGATTTGGTTCGAATCAGGTTTaGATTAAACTCTGGGTCTTTCAAATAGTGTTCATT +
Preference number: 6 (lower is better)
Translates to: ASCCKRFGSNQV*IKLWVFQIVFI
Trigger: AATGAACACTATTTGAAAGACCCAGAGTTTAATCCAAACCTGATTCGAACCAAATCTTTTGCAGCAGCTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp CACGTTGCTTCTAACACATTTTCTACTTTGGCTGTCTaGAACATTAACTCCTTAAATTCAGCATCCACCCCA +
Preference number: 6 (lower is better)
Translates to: HVASNTFSTLAV*NINSLNSASTP
Trigger: TGGGGTGGATGCTGAATTTAAGGAGTTAATGTTCAAGACAGCCAAAGTAGAAAATGTGTTAGAAGCAACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp TTCTTCAGAAAGAAGTCTAAGTCGTGCATTATAGCCTaGAAAAAGCCTTCCACCACAATGTCGTCAATGAAT +
Preference number: 6 (lower is better)
Translates to: FFRKKSKSCIIA*KKPSTTMSSMN
Trigger: ATTCATTGACGACATTGTGGTGGAAGGCTTTTTTCAGGCTATAATGCACGACTTAGACTTCTTTCTGAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp AATACAAATCTCTTCTTCCTGTTTCTGATGGCATCATaGATCATTTTCACTTGTACTGCCACCACTGACAGA +
Preference number: 6 (lower is better)
Translates to: NTNLFFLFLMAS*IIFTCTATTDR
Trigger: TCTGTCAGTGGTGGCAGTACAAGTGAAAATGATTCATGATGCCATCAGAAACAGGAAGAAGAGATTTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp GGTCCAGTTGTTCAAGTGATATACGTATTTCCCGAATaGGAATATTCATCCTCTCACATTCTTGGAAGCAAA +
Preference number: 6 (lower is better)
Translates to: GPVVQVIYVFPE*EYSSSHILGSK
Trigger: TTTGCTTCCAAGAATGTGAGAGGATGAATATTCTCATTCGGGAAATACGTATATCACTTGAACAACTGGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000479878.1
ENST00000620169.4
CDS TCA 72 bp CAATTCCCCCTTCAAACTAAGGTCCAGTTGTTCAAGTaGTATACGTATTTCCCGAATGAGAATATTCATCCT +
Preference number: 6 (lower is better)
Translates to: QFPLQTKVQLFK*YTYFPNENIHP
Trigger: AGGATGAATATTCTCATTCGGGAAATACGTATATCACTTGAACAACTGGACCTTAGTTTGAAGGGGGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp AGTTTACAGAGTTCCATAAGTTCTTCACTCATCTCGTaGACTTGTCCATTTAAAATTGCTCCTTTGGTACCA +
Preference number: 6 (lower is better)
Translates to: SLQSSISSSLIS*TCPFKIAPLVP
Trigger: TGGTACCAAAGGAGCAATTTTAAATGGACAAGTCCACGAGATGAGTGAAGAACTTATGGAACTCTGTAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp GTTAACAAGCTCACTTTGAAAGGCTTCATGTCCACCTaGAACCAACTATCAAACACTCTAAAGTCCTCAAAT +
Preference number: 6 (lower is better)
Translates to: VNKLTLKGFMST*NQLSNTLKSSN
Trigger: ATTTGAGGACTTTAGAGTGTTTGATAGTTGGTTCAAGGTGGACATGAAGCCTTTCAAAGTGAGCTTGTTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 90 bp TTCATAAATGTCAATCTGTTCTTTGAATTGCTCAAGAGTTGGTGGTaGTTCGGGAATTTCTTCATTTGCATGAGCATCCATTTCATCGGA +
Preference number: 6 (lower is better)
Translates to: FINVNLFFELLKSWW*FGNFFICMSIHFIG
Trigger: TCCGATGAAATGGATGCTCATGCAAATGAAGAAATTCCCGAACAACCACCAACTCTTGAGCAATTCAAAGAACAGATTGACATTTATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS GCA 72 bp ACTTCCAGGAGCGTCTGTTTGAGTTTATTATACCCTTaGACAAGAAGGTCAAGATTTCCAATGTACTTTAAA +
Preference number: 6 (lower is better)
Translates to: TSRSVCLSLLYP*TRRSRFPMYFK
Trigger: TTTAAAGTACATTGGAAATCTTGACCTTCTTGTGCAAGGGTATAATAAACTCAAACAGACGCTCCTGGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 90 bp TTAATTATGGTTAACAAGCTCACTTTGAAAGGCTTCATGTCCACCTaGAACCAACTATCAAACACTCTAAAGTCCTCAAATTTGCTCATT +
Preference number: 6 (lower is better)
Translates to: LIMVNKLTLKGFMST*NQLSNTLKSSNLLI
Trigger: AATGAGCAAATTTGAGGACTTTAGAGTGTTTGATAGTTGGTTCAAGGTGGACATGAAGCCTTTCAAAGTGAGCTTGTTAACCATAATTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp TGTTATAAAACTTGGAATGACTCCAGATCAGACAGATaGTATGAAATAATGGAGCGATTAATATGCGTGTCT +
Preference number: 6 (lower is better)
Translates to: CYKTWNDSRSDR*YEIMERLICVS
Trigger: AGACACGCATATTAATCGCTCCATTATTTCATACCATCTGTCTGATCTGGAGTCATTCCAAGTTTTATAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS TCA 72 bp CTTTTTCATGACTTCTATGTGATATTCCATATCTTGTaGAGTAAAACAGGACCAGGACTTATGGTTGTTCTT +
Preference number: 6 (lower is better)
Translates to: LFHDFYVIFHIL*SKTGPGLMVVL
Trigger: AAGAACAACCATAAGTCCTGGTCCTGTTTTACTTCACAAGATATGGAATATCACATAGAAGTCATGAAAAAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CCA 72 bp TTTTTAATTTCCAGGTGTGTTGCTATTCGGTTCATCTaGGCAGACATTCTAAAACTATTGCATAACATTTCT +
Preference number: 6 (lower is better)
Translates to: FLISRCVAIRFI*ADILKLLHNIS
Trigger: AGAAATGTTATGCAATAGTTTTAGAATGTCTGCCCAGATGAACCGAATAGCAACACACCTGGAAATTAAAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp ATATCTTGTGAAGTAAAACAGGACCAGGACTTATGGTaGTTCTTATTAGAAAGAACTGGCACTAAAATCTCA +
Preference number: 6 (lower is better)
Translates to: ISCEVKQDQDLW*FLLERTGTKIS
Trigger: TGAGATTTTAGTGCCAGTTCTTTCTAATAAGAACAACCATAAGTCCTGGTCCTGTTTTACTTCACAAGATAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4
CDS CAA 72 bp GAGAAGACCATTTATGGCACTGAATTTAACCAAGGGTaGATTCAAATTGAATTCACAGATTTCATCCACATT +
Preference number: 6 (lower is better)
Translates to: EKTIYGTEFNQG*IQIEFTDFIHI
Trigger: AATGTGGATGAAATCTGTGAATTCAATTTGAATCAACCCTTGGTTAAATTCAGTGCCATAAATGGTCTTCTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328843.10
ENST00000409508.8
ENST00000620169.4