Pregenerated sensors for DNAAF6 (Homo sapiens)

Ensembl gene IDs: ENSG00000080572

Ensembl transcript IDs: ENST00000336387.4, ENST00000372453.8, ENST00000535523.5, ENST00000673764.1

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	ATCAGCCCTTGGCGAGTAGCAGGTCTTGTAGGTACAAGTAGTCTCTaGACAGTACACTCGGGCCCACCAAGTGAAGGTCTGATTACTTCT	+
Preference number: 5 (lower is better) Translates to: ISPWRVAGLVGTSSL*TVHSGPPSEGLITS Trigger: AGAAGTAATCAGACCTTCACTTGGTGGGCCCGAGTGTACTGTGCAGAGACTACTTGTACCTACAAGACCTGCTACTCGCCAAGGGCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336387.4 ENST00000535523.5 ENST00000673764.1
CDS CCA 90 bp	GGTCTGATTACTTCTCACTCCTCAGCTTATCTAACCAAGCAACACTaGAACCCTCAGACCACAGCGTTCAAGTTGTCGCACAAAGGACAT	+
Preference number: 5 (lower is better) Translates to: GLITSHSSAYLTKQH*NPQTTAFKLSHKGH Trigger: ATGTCCTTTGTGCGACAACTTGAACGCTGTGGTCTGAGGGTTCCAGTGTTGCTTGGTTAGATAAGCTGAGGAGTGAGAAGTAATCAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336387.4 ENST00000535523.5 ENST00000673764.1
CDS TCA 90 bp	AACATCCCACATATCATCATATTCTGCTCCTTCTGGAATCTCTTCTaGATTCCAGATGTCCTCATTATTTTCCTCGCTGGTTTCAGGGAT	+
Preference number: 5 (lower is better) Translates to: NIPHIIIFCSFWNLF*IPDVLIIFLAGFRD Trigger: ATCCCTGAAACCAGCGAGGAAAATAATGAGGACATCTGGAATTCAGAAGAGATTCCAGAAGGAGCAGAATATGATGATATGTGGGATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000336387.4 ENST00000372453.8 ENST00000535523.5
CDS GCA 90 bp	CATAGTCATAGTGATTTCAAGAGTTTCAGTCTCTGGGATATAGAATaGTTTGGCACTGGTACATTCCACCAGCTCAGGAAGAGTTATCAA	+
Preference number: 5 (lower is better) Translates to: HSHSDFKSFSLWDIE*FGTGTFHQLRKSYQ Trigger: TTGATAACTCTTCCTGAGCTGGTGGAATGTACCAGTGCCAAAGCATTCTATATCCCAGAGACTGAAACTCTTGAAATCACTATGACTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336387.4 ENST00000372453.8 ENST00000535523.5
CDS GCA 72 bp	TGGCGAGTAGCAGGTCTTGTAGGTACAAGTAGTCTCTaGACAGTACACTCGGGCCCACCAAGTGAAGGTCTG	+
Preference number: 6 (lower is better) Translates to: WRVAGLVGTSSL*TVHSGPPSEGL Trigger: CAGACCTTCACTTGGTGGGCCCGAGTGTACTGTGCAGAGACTACTTGTACCTACAAGACCTGCTACTCGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336387.4 ENST00000535523.5 ENST00000673764.1
CDS CCA 72 bp	CAGGATAAATCGTGCCTTGGTCAGTTTTCCCGTCTCTaGCTAGGCTCCGAAAATAGACTGTGCAGAGCGTGG	+
Preference number: 6 (lower is better) Translates to: QDKSCLGQFSRL*LGSENRLCRAW Trigger: CCACGCTCTGCACAGTCTATTTTCGGAGCCTAGCCAGAGACGGGAAAACTGACCAAGGCACGATTTATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535523.5
CDS CCA 72 bp	TCGCTGGTTTCAGGGATGACTTTGAGCTCTTCTATTTaGGGTGGTCCAATATTCCCAGGACCCATGGCTCCA	+
Preference number: 6 (lower is better) Translates to: SLVSGMTLSSSI*GGPIFPGPMAP Trigger: TGGAGCCATGGGTCCTGGGAATATTGGACCACCCCAAATAGAAGAGCTCAAAGTCATCCCTGAAACCAGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336387.4 ENST00000372453.8 ENST00000535523.5
CDS CCA 72 bp	ACTTCTCACTCCTCAGCTTATCTAACCAAGCAACACTaGAACCCTCAGACCACAGCGTTCAAGTTGTCGCAC	+
Preference number: 6 (lower is better) Translates to: TSHSSAYLTKQH*NPQTTAFKLSH Trigger: GTGCGACAACTTGAACGCTGTGGTCTGAGGGTTCCAGTGTTGCTTGGTTAGATAAGCTGAGGAGTGAGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336387.4 ENST00000535523.5 ENST00000673764.1
CDS CCA 72 bp	GGTTTCAGGGATGACTTTGAGCTCTTCTATTTGGGGTaGTCCAATATTCCCAGGACCCATGGCTCCAATAGT	+
Preference number: 6 (lower is better) Translates to: GFRDDFELFYLG*SNIPRTHGSNS Trigger: ACTATTGGAGCCATGGGTCCTGGGAATATTGGACCACCCCAAATAGAAGAGCTCAAAGTCATCCCTGAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000336387.4 ENST00000372453.8 ENST00000535523.5
CDS CAA 72 bp	AAGCAACACTGGAACCCTCAGACCACAGCGTTCAAGTaGTCGCACAAAGGACATTATTCACGTAGTAAGTAC	+
Preference number: 6 (lower is better) Translates to: KQHWNPQTTAFK*SHKGHYSRSKY Trigger: GTACTTACTACGTGAATAATGTCCTTTGTGCGACAACTTGAACGCTGTGGTCTGAGGGTTCCAGTGTTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336387.4 ENST00000535523.5 ENST00000673764.1
CDS GCA 72 bp	AGTGATTTCAAGAGTTTCAGTCTCTGGGATATAGAATaGTTTGGCACTGGTACATTCCACCAGCTCAGGAAG	+
Preference number: 6 (lower is better) Translates to: SDFKSFSLWDIE*FGTGTFHQLRK Trigger: CTTCCTGAGCTGGTGGAATGTACCAGTGCCAAAGCATTCTATATCCCAGAGACTGAAACTCTTGAAATCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336387.4 ENST00000372453.8 ENST00000535523.5
CDS CCA 72 bp	TTTCAGATTCCATTATTTACTCTCCCAATCAGCCCTTaGCGAGTAGCAGGTCTTGTAGGTACAAGTAGTCTC	+
Preference number: 6 (lower is better) Translates to: FQIPLFTLPISP*RVAGLVGTSSL Trigger: GAGACTACTTGTACCTACAAGACCTGCTACTCGCCAAGGGCTGATTGGGAGAGTAAATAATGGAATCTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336387.4
CDS CCA 72 bp	TTTCAAGAGTTTCAGTCTCTGGGATATAGAATGCTTTaGCACTGGTACATTCCACCAGCTCAGGAAGAGTTA	+
Preference number: 6 (lower is better) Translates to: FQEFQSLGYRML*HWYIPPAQEEL Trigger: TAACTCTTCCTGAGCTGGTGGAATGTACCAGTGCCAAAGCATTCTATATCCCAGAGACTGAAACTCTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336387.4 ENST00000372453.8 ENST00000535523.5
CDS CCA 72 bp	ATATTTTCAGATTCCATTATTCTCCCAATCAGCCCTTaGCGAGTAGCAGGTCTTGTAGGTACAAGTAGTCTC	+
Preference number: 6 (lower is better) Translates to: IFSDSIILPISP*RVAGLVGTSSL Trigger: GAGACTACTTGTACCTACAAGACCTGCTACTCGCCAAGGGCTGATTGGGAGAATAATGGAATCTGAAAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000535523.5 ENST00000673764.1