RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAAF5 (Homo sapiens)

Ensembl gene IDs: ENSG00000164818

Ensembl transcript IDs: ENST00000297440.11, ENST00000403952.3, ENST00000437419.5, ENST00000438961.1, ENST00000440747.5, ENST00000461576.1, ENST00000486546.1, ENST00000491496.1

Found 499 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTaGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTGAAACCAGCGTG +
Preference number: 1 (lower is better)
Translates to: WHRGALFMRFKGHKL*LRWGQGCAVAETSV
Trigger: CACGCTGGTTTCAGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
3UTR TCA 90 bp TCCACTCAGAGGCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTaGGGAGTACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAG +
Preference number: 1 (lower is better)
Translates to: STQRLLFQGKSGQVS*GVHSCCHSLTAGTE
Trigger: CTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGCCTCTGAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
3UTR GCA 90 bp TGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGTCACAGTCTCACTaGTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAA +
Preference number: 1 (lower is better)
Translates to: WAGVLRSTFLLSQSH*WHRGALFMRFKGHK
Trigger: TTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGTACTCCTCAGGACACCTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
3UTR GCA 90 bp AGATGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATaGAGAATCCACTCAGAGGCTGTTATTCCAGGGAAAGAGTGGGCA +
Preference number: 1 (lower is better)
Translates to: RCLGALSMNRTNHIT*RIHSEAVIPGKEWA
Trigger: TGCCCACTCTTTCCCTGGAATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
3UTR-3UTR GCA 90 bp CACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAGCTGCGCACGTGAGGCTTCTGTCACAGTCTCACTaGTGGCACAGAGGTGCCTTG +
Preference number: 2 (lower is better)
Translates to: HLSRMQPIVHEPAAHVRLLSQSH*WHRGAL
Trigger: CAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAG...AAGCCTCACGTGCGCAGCTGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
3UTR-3UTR CCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGAAAGGCCACAAACTCTaGCTCAGGTGGGGACAAGGG +
Preference number: 2 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLKGHKL*LRWGQG
Trigger: CCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTT...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
3UTR-3UTR CCA 90 bp CACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAGCTGCGCACGTGAGGCTTTCACAGTCTCACTGCTaGCACAGAGGTGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: HLSRMQPIVHEPAAHVRLSQSHC*HRGALF
Trigger: AAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA...AAGCCTCACGTGCGCAGCTGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
3UTR CAA 90 bp GTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTaGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATG +
Preference number: 2 (lower is better)
Translates to: VIPGKEWAGVLRSTF*LSQSHCWHRGALFM
Trigger: CATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
3UTR-3UTR TCA 90 bp GTAGGTAAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATAATCTAAGATGCTGCTaGAGTGGCTGCGGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: VGKNLLGGHLSRMQPIVHNLRCC*SGCGRS
Trigger: GCTCCTCCCGCAGCCACTTCAGCAGCATCTTAGATT...ATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTTACCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
3UTR-3UTR CCA 90 bp AAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAAAAGGCCACAAACTCTaGCTCAGGTGGGGACAAGGG +
Preference number: 2 (lower is better)
Translates to: KNLLGGHLSRMQPIVHEPKGHKL*LRWGQG
Trigger: CCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTT...TGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
3UTR CAA 90 bp AGTACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTaGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: STFLLSQSHCWHRGA*FMRFKGHKLWLRWG
Trigger: TCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
3UTR-3UTR GCA 90 bp ATGTGCGAGAGGGAAATGCAACTTTACTTTCCTGCTACCTATAGGGGCAACCACTGCGGGAGGAGCGGCTaGGACTTACTTTTAATTTCA +
Preference number: 2 (lower is better)
Translates to: MCEREMQLYFPATYRGNHCGRSG*DLLLIS
Trigger: TGAAATTAAAAGTAAGTCGCAGCCGCTCCTCCCGCA...GTGGTTGCCCCTATAGGTAGCAGGAAAGTAAAGTTGCATTTCCCTCTCGCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297440.11
3UTR-3UTR TCA 90 bp TATATACGGCATTTCCCCCGTGTGAACACAATGGCTTCCGGTAACACTACCCACGAGGTGCCTTGTTTATaGGATTTAAAGGCCACAAAC +
Preference number: 2 (lower is better)
Translates to: YIRHFPRVNTMASGNTTHEVPCL*DLKATN
Trigger: GTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTC...GTGGGTAGTGTTACCGGAAGCCATTGTGTTCACACGGGGGAAATGCCGTATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297440.11
3UTR-3UTR TCA 90 bp AGATGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCAGTGGGCAGGTGTCCTaGGGAGTACATTCTTGCTGT +
Preference number: 2 (lower is better)
Translates to: RCLGALSMNRTNHITCRISGQVS*GVHSCC
Trigger: ACAGCAAGAATGTACTCCTCAGGACACCTGCCCACT...GATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
3UTR-3UTR CCA 90 bp GATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTCCTCACAGTCTCACTGCTaGCACAGAGGTGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: DEQNKSHNMQNPLRGCYSSQSHC*HRGALF
Trigger: AAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA...GGAATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
3UTR CCA 72 bp GGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTaGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTGAA +
Preference number: 3 (lower is better)
Translates to: GALFMRFKGHKL*LRWGQGCAVAE
Trigger: TTCAGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
3UTR TCA 72 bp AGGCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTaGGGAGTACATTCTTGCTGTCACAGTCTCACTGCT +
Preference number: 3 (lower is better)
Translates to: RLLFQGKSGQVS*GVHSCCHSLTA
Trigger: AGCAGTGAGACTGTGACAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
3UTR CCA 72 bp AGAATCCACTCAGAGGCTGTTATTCCAGGGAAAGAGTaGGCAGGTGTCCTGAGGAGTACATTCTTGCTGTCA +
Preference number: 3 (lower is better)
Translates to: RIHSEAVIPGKE*AGVLRSTFLLS
Trigger: TGACAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGCCTCTGAGTGGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
3UTR-3UTR CAA 90 bp CTGCGGGAGGAGCGGCTGCGACTTACTTTTAATTTCAAATCAGCTGCAGATGTTCTGAGGAGTACATTCTaGCTGTCACAGTCTCACTGC +
Preference number: 3 (lower is better)
Translates to: LREERLRLTFNFKSAADVLRSTF*LSQSHC
Trigger: GCAGTGAGACTGTGACAGCAAGAATGTACTCCTCAG...AACATCTGCAGCTGATTTGAAATTAAAAGTAAGTCGCAGCCGCTCCTCCCGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
3UTR-3UTR CAA 90 bp GATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTCCCTGAGGAGTACATTCTaGCTGTCACAGTCTCACTGC +
Preference number: 3 (lower is better)
Translates to: DEQNKSHNMQNPLRGCYSLRSTF*LSQSHC
Trigger: GCAGTGAGACTGTGACAGCAAGAATGTACTCCTCAG...GGAATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp CACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTGAAACCAGCGTGAGGCTGGCAGCCAGCTaGCTGACCTCAGGCACCTCG +
Preference number: 4 (lower is better)
Translates to: HKLWLRWGQGCAVAETSVRLAAS*LTSGTS
Trigger: CGAGGTGCCTGAGGTCAGGCAGCTGGCTGCCAGCCT...CACGCTGGTTTCAGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp CACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTGAAACCAGCGTGCTGCCTCCTCGTCGGTaGAGGCCTGGAACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: HKLWLRWGQGCAVAETSVLPPRR*RPGTGS
Trigger: GGACCCTGTTCCAGGCCTGCACCGACGAGGAGGCAG...CACGCTGGTTTCAGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp CACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTGAAACCAGCGTGAGCTTCAGGCGCATCTaGGGGTCTTGGGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: HKLWLRWGQGCAVAETSVSFRRI*GSWEGC
Trigger: GCAGCCCTCCCAAGACCCGCAGATGCGCCTGAAGCT...CACGCTGGTTTCAGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp CACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTGAAACCAGCGTGGTCCCGTATCTGCTCTaGCGACAGGACCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: HKLWLRWGQGCAVAETSVVPYLL*RQDLAA
Trigger: AGCAGCGAGGTCCTGTCGGCAGAGCAGATACGGGAC...CACGCTGGTTTCAGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp CACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTGAAACCAGCGTGTGCACGTCCCGTATCTaGTCTGCCGACAGGACCTCG +
Preference number: 4 (lower is better)
Translates to: HKLWLRWGQGCAVAETSVCTSRI*SADRTS
Trigger: CGAGGTCCTGTCGGCAGAGCAGATACGGGACGTGCA...CACGCTGGTTTCAGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp CACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTGAAACCAGCGTGTGTGAGCCTTCTCCCTaGCGCCGCCAGTCATCAGAG +
Preference number: 4 (lower is better)
Translates to: HKLWLRWGQGCAVAETSVCEPSP*RRQSSE
Trigger: CTCTGATGACTGGCGGCGCCAGGGAGAAGGCTCACA...CACGCTGGTTTCAGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR GCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGAGGACACGGCAGCCGTaGGGATGGCCGCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLRTRQP*GWPRLS
Trigger: GGACAGCCGCGGCCATCCGCACGGCTGCCGTGTCCT...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp AGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTAGGTGCTGCGTGGCGTaGTCCTCGGCATGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RFKGHKLWLRWGQGCAVARCCVA*SSACSS
Trigger: GCTGCTGCATGCCGAGGACCACGCCACGCAGCACCT...AGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp AGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTTCGTCGGTGCAGGCCTaGAACAGGGTCCGGAGGACG +
Preference number: 4 (lower is better)
Translates to: RFKGHKLWLRWGQGCAVASSVQA*NRVRRT
Trigger: CGTCCTCCGGACCCTGTTCCAGGCCTGCACCGACGA...AGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp AGAATCCACTCAGAGGCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGGCGTGGTCCTCGGCATaGAGCAGCAGCACTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RIHSEAVIPGKEWAGVLRAWSSA*SSSTGS
Trigger: GCTCCCAGTGCTGCTGCTGCATGCCGAGGACCACGC...CCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGCCTCTGAGTGGATTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp AGAATCCACTCAGAGGCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGCTGCCTCCTCGTCGGTaGAGGCCTGGAACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: RIHSEAVIPGKEWAGVLRLPPRR*RPGTGS
Trigger: GGACCCTGTTCCAGGCCTGCACCGACGAGGAGGCAG...CCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGCCTCTGAGTGGATTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp CACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTGAAACCAGCGTGCGTCCCGACGAGCTCTaGGGATCTGGTACAACTTTG +
Preference number: 4 (lower is better)
Translates to: HKLWLRWGQGCAVAETSVRPDEL*GSGTTL
Trigger: CAAAGTTGTACCAGATCCGCAGAGCTCGTCGGGACG...CACGCTGGTTTCAGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp CACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAGCTGCGCACGTGAGGCTTGCTGTCCTCCCCGCATaGCACTGCAGATTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: HLSRMQPIVHEPAAHVRLAVLPA*HCRLGA
Trigger: GGCCCCCAATCTGCAGTGGCATGCGGGGAGGACAGC...AAGCCTCACGTGCGCAGCTGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp AGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTAGGGCCTTGAGCCGTTaGTGGGGACCTCGCGATGTG +
Preference number: 4 (lower is better)
Translates to: RFKGHKLWLRWGQGCAVARALSR*WGPRDV
Trigger: CACATCGCGAGGTCCCCAGCAACGGCTCAAGGCCCT...AGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR CCA 90 bp AGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTAGGGCGGCGCTCATGTaGAGGGTAATGGGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: RFKGHKLWLRWGQGCAVARAALM*RVMGWG
Trigger: ACCCCACCCCATTACCCTCCACATGAGCGCCGCCCT...AGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp CACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTGAAACCAGCGTGCTGGATGGCCCTCTCTaGATCGTCAAGGTGAACCAG +
Preference number: 4 (lower is better)
Translates to: HKLWLRWGQGCAVAETSVLDGPL*IVKVNQ
Trigger: CTGGTTCACCTTGACGATCCAGAGAGGGCCATCCAG...CACGCTGGTTTCAGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp AGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTGCTGCTCGCAGTAGGTaGCCGAGCGGTGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RFKGHKLWLRWGQGCAVAAARSR*PSGACG
Trigger: TCCACAAGCACCGCTCGGCCACCTACTGCGAGCAGC...AGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGTGGCAGCCAGCTGCCTaGCCTCAGGCACCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLWQPAA*PQAPRR
Trigger: ACGACGAGGTGCCTGAGGTCAGGCAGCTGGCTGCCA...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR TCA 90 bp CACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAGCTGCGCACGTGAGGCTTAGCGGTGCTTGTGGATaGCGGCCTCCGTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: HLSRMQPIVHEPAAHVRLSGACG*RPPSPS
Trigger: TGAGGGAGACGGAGGCCGTCATCCACAAGCACCGCT...AAGCCTCACGTGCGCAGCTGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp TCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACCCCAGGGCAGGGCCTTaGGCCGTTGCTGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: SQSHCWHRGALFMRFKGHPRAGP*AVAGDL
Trigger: GAGGTCCCCAGCAACGGCTCAAGGCCCTGCCCTGGG...GTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR GCA 90 bp TCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACGCCAGGCCCAGCAGCTaGACAAGCGCCAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SQSHCWHRGALFMRFKGHARPSS*TSARRS
Trigger: GCTGCGCCTGGCGCTTGTGCAGCTGCTGGGCCTGGC...GTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR GCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGAGGACGACCTCCAGGTaGTGCGTGGCGTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLRTTSR*CVAWSS
Trigger: CGAGGACCACGCCACGCAGCACCTGGAGGTCGTCCT...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp CACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAGCTGCGCACGTGAGGCTTCTCCCCGCATGCCACTaGAGATTGGGGGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: HLSRMQPIVHEPAAHVRLLPACH*RLGARM
Trigger: CATCCTGGCCCCCAATCTGCAGTGGCATGCGGGGAG...AAGCCTCACGTGCGCAGCTGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGGCTGTCCTCCCCGCATaGCACTGCAGATTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLAVLPA*HCRLGA
Trigger: GGCCCCCAATCTGCAGTGGCATGCGGGGAGGACAGC...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGGGCACGGCCTGCACATaGTGCAGGAGCTGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLGTACT*CRSCSQ
Trigger: CTGCGAGCAGCTCCTGCAGCATGTGCAGGCCGTGCC...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp AGAATCCACTCAGAGGCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGCCCCGCACCTGCCCTTaGCACACGGAGACGCAATGT +
Preference number: 4 (lower is better)
Translates to: RIHSEAVIPGKEWAGVLRPRTCP*HTETQC
Trigger: ACATTGCGTCTCCGTGTGGCAAGGGCAGGTGCGGGG...CCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGCCTCTGAGTGGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR CCA 90 bp AGAATCCACTCAGAGGCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGGACTCCGACTGCATGTaGAAGTGGTCGGGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: RIHSEAVIPGKEWAGVLRDSDCM*KWSGVA
Trigger: GGCCACGCCCGACCACTTCCACATGCAGTCGGAGTC...CCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGCCTCTGAGTGGATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR CCA 90 bp AGAATCCACTCAGAGGCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGGGCGGCGCTCATGTaGAGGGTAATGGGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: RIHSEAVIPGKEWAGVLRRAALM*RVMGWG
Trigger: ACCCCACCCCATTACCCTCCACATGAGCGCCGCCCT...CCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGCCTCTGAGTGGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR TCA 90 bp GGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGGGGACCTCGCGATGTaGGCCTTCTCCCTGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GALSMNRTNHITCRIHSEGDLAM*AFSLAP
Trigger: CGGCGCCAGGGAGAAGGCTCACATCGCGAGGTCCCC...CTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR GCA 90 bp TGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCCCCAGATCCAGCAGGTaGACTGCCAGCGCGCGGCAG +
Preference number: 4 (lower is better)
Translates to: CWHRGALFMRFKGHKLWLPRSSR*TASARQ
Trigger: CTGCCGCGCGCTGGCAGTGCACCTGCTGGATCTGGG...GAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR GCA 90 bp GAGGAGTACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTACCGCCCGCCGGACCTaGGGGACGTCATCAAACAGT +
Preference number: 4 (lower is better)
Translates to: EEYILAVTVSLLAQRCLVTARRT*GTSSNS
Trigger: ACTGTTTGATGACGTCCCGCAGGTCCGGCGGGCGGT...AACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGTACTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGGCAGATGTGGGCCTGTaGCAGCTCTGTGGCGATGGC +
Preference number: 4 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLADVGL*QLCGDG
Trigger: GCCATCGCCACAGAGCTGGCACAGGCCCACATCTGC...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp CACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAGCTGCGCACGTGAGGCTTCAGGCCGGTAGCACCTaGGAGGGCCACTATTGTCAG +
Preference number: 4 (lower is better)
Translates to: HLSRMQPIVHEPAAHVRLQAGST*EGHYCQ
Trigger: CTGACAATAGTGGCCCTCGCAGGTGCTACCGGCCTG...AAGCCTCACGTGCGCAGCTGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp AGAATCCACTCAGAGGCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGCAGGCCGGTAGCACCTaGGAGGGCCACTATTGTCAG +
Preference number: 4 (lower is better)
Translates to: RIHSEAVIPGKEWAGVLRQAGST*EGHYCQ
Trigger: CTGACAATAGTGGCCCTCGCAGGTGCTACCGGCCTG...CCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGCCTCTGAGTGGATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp GAGGAGTACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTCTCCCCGCATGCCACTaGAGATTGGGGGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: EEYILAVTVSLLAQRCLVLPACH*RLGARM
Trigger: CATCCTGGCCCCCAATCTGCAGTGGCATGCGGGGAG...AACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGTACTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp AAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAAGGACACGGCAGCCGTaGGGATGGCCGCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: KNLLGGHLSRMQPIVHEPRTRQP*GWPRLS
Trigger: GGACAGCCGCGGCCATCCGCACGGCTGCCGTGTCCT...TGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp AGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTCAAGGTGGAGGCGGCTaGCATCCTCACATCGTTGGA +
Preference number: 4 (lower is better)
Translates to: RFKGHKLWLRWGQGCAVAQGGGG*HPHIVG
Trigger: TCCAACGATGTGAGGATGGCAGCCGCCTCCACCTTG...AGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp CACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAGCTGCGCACGTGAGGCTTGGATCACTGCGCCTGTaGCTTCAATGGCGGCCACAC +
Preference number: 4 (lower is better)
Translates to: HLSRMQPIVHEPAAHVRLGSLRL*LQWRPH
Trigger: GTGTGGCCGCCATTGAAGCCACAGGCGCAGTGATCC...AAGCCTCACGTGCGCAGCTGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp CACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGCTGCCAGGTGCGGCTaGAGGGCTTCTCGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: HRGALFMRFKGHKLWLRWAARCG*RASRGQ
Trigger: TTGCCCCCGAGAAGCCCTCCAGCCGCACCTGGCAGC...CCACCTGAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp TATATACGGCATTTCCCCCGTGTGAACACAATGGCTTCCGGTAACACTACCCACCCAGCTCTGTGGCGATaGCTGCCAGGTGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: YIRHFPRVNTMASGNTTHPALWR*LPGAAG
Trigger: TCCAGCCGCACCTGGCAGCCATCGCCACAGAGCTGG...GTGGGTAGTGTTACCGGAAGCCATTGTGTTCACACGGGGGAAATGCCGTATATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR CCA 90 bp ACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGACGTGGGCACGACGTGTaGCAGGGCTTCTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TFLLSQSHCWHRGALFMRRGHDV*QGFSQG
Trigger: GCCCTGGGAGAAGCCCTGCCACACGTCGTGCCCACG...TCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp CACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAGCTGCGCACGTGAGGCTTCCGTCTCGAGGTAGCTaGGAAACTGCCCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: HLSRMQPIVHEPAAHVRLPSRGS*ETAPGS
Trigger: ACTCCCAGGGGCAGTTTCCCAGCTACCTCGAGACGG...AAGCCTCACGTGCGCAGCTGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp AGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTAGGGTGGTCAGGACCTaGGGCATCAGTGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RFKGHKLWLRWGQGCAVARVVRT*GISVSC
Trigger: GCAGGAAACACTGATGCCCCAGGTCCTGACCACCCT...AGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp AGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTAATCCTCCTCCAGGGTaGTCAGGACCTGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: RFKGHKLWLRWGQGCAVANPPPG*SGPGAS
Trigger: TGATGCCCCAGGTCCTGACCACCCTGGAGGAGGATT...AGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp GAGGAGTACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTCCTCACCAGGAGATCTaGGAACAGCCCGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: EEYILAVTVSLLAQRCLVPHQEI*EQPAAL
Trigger: GAGGGCAGCGGGCTGTTCCCAGATCTCCTGGTGAGG...AACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGTACTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp GAGGAGTACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTGCTGCTCGCAGTAGGTaGCCGAGCGGTGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: EEYILAVTVSLLAQRCLVAARSR*PSGACG
Trigger: TCCACAAGCACCGCTCGGCCACCTACTGCGAGCAGC...AACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGTACTCCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp AGAATCCACTCAGAGGCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAAGATGCTGCTGAAGTaGCTGCGGGAGGAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: RIHSEAVIPGKEWAGVLRKMLLK*LREERL
Trigger: CAGCCGCTCCTCCCGCAGCCACTTCAGCAGCATCTT...CCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGCCTCTGAGTGGATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp ACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATGGCAGCCAGCTGCCTaGCCTCAGGCACCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: TFLLSQSHCWHRGALFMRWQPAA*PQAPRR
Trigger: ACGACGAGGTGCCTGAGGTCAGGCAGCTGGCTGCCA...TCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR TCA 90 bp ACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGACCACCACCCAGTCGGTaGTGTCGTGGCACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TFLLSQSHCWHRGALFMRPPPSR*CRGTGQ
Trigger: CTGCCCTGTGCCACGACATCACCGACTGGGTGGTGG...TCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR TCA 90 bp AGAATCCACTCAGAGGCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGGAAACACCTCAGGGCTaGCAAACGTCCCGACGAGCT +
Preference number: 4 (lower is better)
Translates to: RIHSEAVIPGKEWAGVLRETPQG*QTSRRA
Trigger: AGCTCGTCGGGACGTTTGTCAGCCCTGAGGTGTTTC...CCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGCCTCTGAGTGGATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR TCA 90 bp GAGGAGTACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTCTCCACCATGGCCAGTaGGTCCATCGTCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: EEYILAVTVSLLAQRCLVLHHGQ*VHRLLC
Trigger: GCACAGGAGACGATGGACTCACTGGCCATGGTGGAG...AACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGTACTCCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR TCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGCTCCACCATGGCCAGTaGGTCCATCGTCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLLHHGQ*VHRLLC
Trigger: GCACAGGAGACGATGGACTCACTGGCCATGGTGGAG...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR TCA 90 bp ACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGACACACTGCAGCCAGGTaGCCAAGGTGGAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: TFLLSQSHCWHRGALFMRHTAAR*PRWRRL
Trigger: CAGCCGCCTCCACCTTGGTCACCTGGCTGCAGTGTG...TCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp CACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTGAAACCAGCGTGAACCAGCTGCGCACGTaGGGCTTAAAATCTAAGATG +
Preference number: 4 (lower is better)
Translates to: HKLWLRWGQGCAVAETSVNQLRT*GLKSKM
Trigger: CATCTTAGATTTTAAGCCTCACGTGCGCAGCTGGTT...CACGCTGGTTTCAGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp AGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTAAGCACGCTGACGGGTaGGCCACTTGCTGTCAAGAA +
Preference number: 4 (lower is better)
Translates to: RFKGHKLWLRWGQGCAVAKHADG*ATCCQE
Trigger: TTCTTGACAGCAAGTGGCTCACCCGTCAGCGTGCTT...AGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR GCA 90 bp GGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGATCCAGCAGGTGCACTaGCAGCGCGCGGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GALSMNRTNHITCRIHSEIQQVH*QRAAAL
Trigger: GAGGGCTGCCGCGCGCTGGCAGTGCACCTGCTGGAT...CTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR GCA 90 bp CACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAGCTGCGCACGTGAGGCTTACACGGACCTTCCAGTaGTGGTGGGAGATGGTCTGC +
Preference number: 4 (lower is better)
Translates to: HLSRMQPIVHEPAAHVRLTRTFQ*WWEMVC
Trigger: GCAGACCATCTCCCACCAGCACTGGAAGGTCCGTGT...AAGCCTCACGTGCGCAGCTGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR GCA 90 bp TCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACGCGTGGTCCTCGGCATaGAGCAGCAGCACTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SQSHCWHRGALFMRFKGHAWSSA*SSSTGS
Trigger: GCTCCCAGTGCTGCTGCTGCATGCCGAGGACCACGC...GTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp TCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACACGACCTCCAGGTGCTaGGTGGCGTGGTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: SQSHCWHRGALFMRFKGHTTSRC*VAWSSA
Trigger: TGCCGAGGACCACGCCACGCAGCACCTGGAGGTCGT...GTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp CACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCAGGTGGACGACCTCCAGGTGCTaGGTGGCGTGGTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: HRGALFMRFKGHKLWLRWTTSRC*VAWSSA
Trigger: TGCCGAGGACCACGCCACGCAGCACCTGGAGGTCGT...CCACCTGAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp CAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAAGCGGTCCAGTCAAGGTaGGACGCGGTCACCCGCTCC +
Preference number: 4 (lower is better)
Translates to: QSHCWHRGALFMRFKGHKAVQSR*DAVTRS
Trigger: GGAGCGGGTGACCGCGTCGCACCTTGACTGGACCGC...TTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp CACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGGGGTCTTGGGAGGGCTaGAGACAGGCCCTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: HCWHRGALFMRFKGHKLWGSWEG*RQALSV
Trigger: CACGCTGAGGGCCTGTCTGCAGCCCTCCCAAGACCC...CCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp TGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCGGGTCTTGGGAGGGCTaGAGACAGGCCCTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: CWHRGALFMRFKGHKLWLGSWEG*RQALSV
Trigger: CACGCTGAGGGCCTGTCTGCAGCCCTCCCAAGACCC...GAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp ATACGGCATTTCCCCCGTGTGAACACAATGGCTTCCGGTAACACTACCCACTTAAGCTTCAGGCGCATCTaGGGGTCTTGGGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: IRHFPRVNTMASGNTTHLSFRRI*GSWEGC
Trigger: GCAGCCCTCCCAAGACCCGCAGATGCGCCTGAAGCT...TAAGTGGGTAGTGTTACCGGAAGCCATTGTGTTCACACGGGGGAAATGCCGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR GCA 90 bp TTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAAGGACACGGCAGCCGTaGGGATGGCCGCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLSQSHCWHRGALFMRFKRTRQP*GWPRLS
Trigger: GGACAGCCGCGGCCATCCGCACGGCTGCCGTGTCCT...TTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp CACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAGCTGCGCACGTGAGGCTTGCACCCTTGACACACTaGAGCCAGGTGACCAAGGTG +
Preference number: 4 (lower is better)
Translates to: HLSRMQPIVHEPAAHVRLAPLTH*SQVTKV
Trigger: CACCTTGGTCACCTGGCTGCAGTGTGTCAAGGGTGC...AAGCCTCACGTGCGCAGCTGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp CTGCGGGAGGAGCGGCTGCGACTTACTTTTAATTTCAAATCAGCTGCAGATGTTGGCACGGCCTGCACATaGTGCAGGAGCTGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: LREERLRLTFNFKSAADVGTACT*CRSCSQ
Trigger: CTGCGAGCAGCTCCTGCAGCATGTGCAGGCCGTGCC...AACATCTGCAGCTGATTTGAAATTAAAAGTAAGTCGCAGCCGCTCCTCCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp CACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCAGGTGGCAGCACGGACACTTCTaGCCGGGCCACCCATCTGCC +
Preference number: 4 (lower is better)
Translates to: HRGALFMRFKGHKLWLRWQHGHF*PGHPSA
Trigger: GGCAGATGGGTGGCCCGGGCAGAAGTGTCCGTGCTG...CCACCTGAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR GCA 90 bp CTGCGGGAGGAGCGGCTGCGACTTACTTTTAATTTCAAATCAGCTGCAGATGTTGGCCAAGTGCCGCCCTaGCACGAGAACCACGCTGCT +
Preference number: 4 (lower is better)
Translates to: LREERLRLTFNFKSAADVGQVPP*HENHAA
Trigger: AGCAGCGTGGTTCTCGTGGCAGGGCGGCACTTGGCC...AACATCTGCAGCTGATTTGAAATTAAAAGTAAGTCGCAGCCGCTCCTCCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR CCA 90 bp GAGGAGTACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTCAGTCGGTGATGTCGTaGCACAGGGCAGGGAGGATC +
Preference number: 4 (lower is better)
Translates to: EEYILAVTVSLLAQRCLVQSVMS*HRAGRI
Trigger: GATCCTCCCTGCCCTGTGCCACGACATCACCGACTG...AACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGTACTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp TCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAGGTGCTGCGTGGCGTaGTCCTCGGCATGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SQSHCWHRGALFMRFKGHRCCVA*SSACSS
Trigger: GCTGCTGCATGCCGAGGACCACGCCACGCAGCACCT...GTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp GGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGCTGCCAGGTGCGGCTaGAGGGCTTCTCGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: GSPLDEQNKSHNMQNPLRAARCG*RASRGQ
Trigger: TTGCCCCCGAGAAGCCCTCCAGCCGCACCTGGCAGC...TCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp ACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGACCAGCTCTGTGGCGATaGCTGCCAGGTGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: TFLLSQSHCWHRGALFMRPALWR*LPGAAG
Trigger: TCCAGCCGCACCTGGCAGCCATCGCCACAGAGCTGG...TCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp GTAGGTAAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATCGTGGGCACGACGTGTaGCAGGGCTTCTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VGKNLLGGHLSRMQPIVHRGHDV*QGFSQG
Trigger: GCCCTGGGAGAAGCCCTGCCACACGTCGTGCCCACG...ATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTTACCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp ATGTGCGAGAGGGAAATGCAACTTTACTTTCCTGCTACCTATAGGGGCAACCACCGCATCTGCGGGTCTTaGGAGGGCTGCAGACAGGCC +
Preference number: 4 (lower is better)
Translates to: MCEREMQLYFPATYRGNHRICGS*EGCRQA
Trigger: GGCCTGTCTGCAGCCCTCCCAAGACCCGCAGATGCG...GTGGTTGCCCCTATAGGTAGCAGGAAAGTAAAGTTGCATTTCCCTCTCGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR CCA 90 bp GAGGAGTACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTCCGTCTCGAGGTAGCTaGGAAACTGCCCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: EEYILAVTVSLLAQRCLVPSRGS*ETAPGS
Trigger: ACTCCCAGGGGCAGTTTCCCAGCTACCTCGAGACGG...AACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGTACTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp GAGGAGTACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTAAGATGCTGCTGAAGTaGCTGCGGGAGGAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: EEYILAVTVSLLAQRCLVKMLLK*LREERL
Trigger: CAGCCGCTCCTCCCGCAGCCACTTCAGCAGCATCTT...AACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGTACTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp CACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCCAGAGCACGAGTCTTaGGCCAAGTGCCGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: HCWHRGALFMRFKGHKLWPEHES*AKCRPA
Trigger: GGCAGGGCGGCACTTGGCCCAAGACTCGTGCTCTGG...CCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR TCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGACGCCACAGTCCTCATaGCACACAGACACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLTPQSS*HTDTRA
Trigger: GGCTCTGGTGTCTGTGTGTCATGAGGACTGTGGCGT...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR TCA 90 bp CAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACACACTGCAGCCAGGTaGCCAAGGTGGAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: QSHCWHRGALFMRFKGHKHTAAR*PRWRRL
Trigger: CAGCCGCCTCCACCTTGGTCACCTGGCTGCAGTGTG...TTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp CTGCGGGAGGAGCGGCTGCGACTTACTTTTAATTTCAAATCAGCTGCAGATGTTAGCGGTGCTTGTGGATaGCGGCCTCCGTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LREERLRLTFNFKSAADVSGACG*RPPSPS
Trigger: TGAGGGAGACGGAGGCCGTCATCCACAAGCACCGCT...AACATCTGCAGCTGATTTGAAATTAAAAGTAAGTCGCAGCCGCTCCTCCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp AGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTAAGAATGTTCAAACCTaGCGCCTGGGCCACGTGTCT +
Preference number: 4 (lower is better)
Translates to: RFKGHKLWLRWGQGCAVAKNVQT*RLGHVS
Trigger: AGACACGTGGCCCAGGCGTCAGGTTTGAACATTCTT...AGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR TCA 90 bp TTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAACTGGGACGCCTGACTTaGGCCTCCCGCCAGAGCACG +
Preference number: 4 (lower is better)
Translates to: LLSQSHCWHRGALFMRFKLGRLT*ASRQST
Trigger: CGTGCTCTGGCGGGAGGCTCAAGTCAGGCGTCCCAG...TTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR TCA 90 bp CAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAAAGCTGCTGGGACGCCTaGCTTGAGCCTCCCGCCAGA +
Preference number: 4 (lower is better)
Translates to: QSHCWHRGALFMRFKGHKSCWDA*LEPPAR
Trigger: TCTGGCGGGAGGCTCAAGTCAGGCGTCCCAGCAGCT...TTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR TCA 90 bp CTGCGGGAGGAGCGGCTGCGACTTACTTTTAATTTCAAATCAGCTGCAGATGTTAGTCAGGCCTCGCGGTaGGACCAGCTGGTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LREERLRLTFNFKSAADVSQASR*DQLVSW
Trigger: CCAAGACACCAGCTGGTCTCACCGCGAGGCCTGACT...AACATCTGCAGCTGATTTGAAATTAAAAGTAAGTCGCAGCCGCTCCTCCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR GCA 90 bp GTAGGTAAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATAGGACGACCTCCAGGTaGTGCGTGGCGTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: VGKNLLGGHLSRMQPIVHRTTSR*CVAWSS
Trigger: CGAGGACCACGCCACGCAGCACCTGGAGGTCGTCCT...ATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTTACCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp CTGCGGGAGGAGCGGCTGCGACTTACTTTTAATTTCAAATCAGCTGCAGATGTTACTTTGGACCACGGCTaGCTCCTCGTCGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LREERLRLTFNFKSAADVTLDHG*LLVGAG
Trigger: GCCTGCACCGACGAGGAGGCAGCCGTGGTCCAAAGT...AACATCTGCAGCTGATTTGAAATTAAAAGTAAGTCGCAGCCGCTCCTCCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp TTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGCGGTCCAGTCAAGGTaGGACGCGGTCACCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LLSQSHCWHRGALFMRFKAVQSR*DAVTRS
Trigger: GGAGCGGGTGACCGCGTCGCACCTTGACTGGACCGC...TTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp CTGCGGGAGGAGCGGCTGCGACTTACTTTTAATTTCAAATCAGCTGCAGATGTTGAGCTCCGGCGAGTGTaGGGTCCAGTCAAGGTGCGA +
Preference number: 4 (lower is better)
Translates to: LREERLRLTFNFKSAADVELRRV*GPVKVR
Trigger: TCGCACCTTGACTGGACCGCACACTCGCCGGAGCTC...AACATCTGCAGCTGATTTGAAATTAAAAGTAAGTCGCAGCCGCTCCTCCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp TCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAGCTTCAGGCGCATCTaGGGGTCTTGGGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SQSHCWHRGALFMRFKGHSFRRI*GSWEGC
Trigger: GCAGCCCTCCCAAGACCCGCAGATGCGCCTGAAGCT...GTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp CTGCGGGAGGAGCGGCTGCGACTTACTTTTAATTTCAAATCAGCTGCAGATGTTCTCCCCGCATGCCACTaGAGATTGGGGGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: LREERLRLTFNFKSAADVLPACH*RLGARM
Trigger: CATCCTGGCCCCCAATCTGCAGTGGCATGCGGGGAG...AACATCTGCAGCTGATTTGAAATTAAAAGTAAGTCGCAGCCGCTCCTCCCGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp GTAGGTAAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATGCTGTCCTCCCCGCATaGCACTGCAGATTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: VGKNLLGGHLSRMQPIVHAVLPA*HCRLGA
Trigger: GGCCCCCAATCTGCAGTGGCATGCGGGGAGGACAGC...ATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTTACCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGCAAGGTGGAGGCGGCTaGCATCCTCACATCGTTGGA +
Preference number: 4 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLQGGGG*HPHIVG
Trigger: TCCAACGATGTGAGGATGGCAGCCGCCTCCACCTTG...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGGCACCCTTGACACACTaGAGCCAGGTGACCAAGGTG +
Preference number: 4 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLAPLTH*SQVTKV
Trigger: CACCTTGGTCACCTGGCTGCAGTGTGTCAAGGGTGC...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp TGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCGAGTCTTGGGCCAAGTaGCGCCCTGCCACGAGAACC +
Preference number: 4 (lower is better)
Translates to: CWHRGALFMRFKGHKLWLESWAK*RPATRT
Trigger: GGTTCTCGTGGCAGGGCGGCACTTGGCCCAAGACTC...GAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR CCA 90 bp AAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATGAACCATCGTCGGTGCAGGCCTaGAACAGGGTCCGGAGGACG +
Preference number: 4 (lower is better)
Translates to: KNLLGGHLSRMQPIVHEPSSVQA*NRVRRT
Trigger: CGTCCTCCGGACCCTGTTCCAGGCCTGCACCGACGA...TGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp AGAATCCACTCAGAGGCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGGATCTGGTACAACTTTaGACCACGGCTGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RIHSEAVIPGKEWAGVLRDLVQL*TTAASS
Trigger: CGAGGAGGCAGCCGTGGTCCAAAGTTGTACCAGATC...CCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGCCTCTGAGTGGATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp TGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACCGTGGGCACGACGTGTaGCAGGGCTTCTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CLGALSMNRTNHITCRIHRGHDV*QGFSQG
Trigger: GCCCTGGGAGAAGCCCTGCCACACGTCGTGCCCACG...GTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp TTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGACAGGCCCTCAGCGTaGGCACGACGTGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LLSQSHCWHRGALFMRFKDRPSA*ARRVAG
Trigger: CCCTGCCACACGTCGTGCCCACGCTGAGGGCCTGTC...TTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp GGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGACGCATCTGCGGGTCTTaGGAGGGCTGCAGACAGGCC +
Preference number: 4 (lower is better)
Translates to: GSPLDEQNKSHNMQNPLRRICGS*EGCRQA
Trigger: GGCCTGTCTGCAGCCCTCCCAAGACCCGCAGATGCG...TCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGAATCCTCCTCCAGGGTaGTCAGGACCTGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLNPPPG*SGPGAS
Trigger: TGATGCCCCAGGTCCTGACCACCCTGGAGGAGGATT...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp TGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCCCTCACCAGGAGATCTaGGAACAGCCCGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: CWHRGALFMRFKGHKLWLPHQEI*EQPAAL
Trigger: GAGGGCAGCGGGCTGTTCCCAGATCTCCTGGTGAGG...GAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp TCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACGCTGCTCGCAGTAGGTaGCCGAGCGGTGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SQSHCWHRGALFMRFKGHAARSR*PSGACG
Trigger: TCCACAAGCACCGCTCGGCCACCTACTGCGAGCAGC...GTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp AGAATCCACTCAGAGGCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAAAGGCCACAAACTCTaGCTCAGGTGGGGACAAGGG +
Preference number: 4 (lower is better)
Translates to: RIHSEAVIPGKEWAGVLRKGHKL*LRWGQG
Trigger: CCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTT...CCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGCCTCTGAGTGGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGTTCAAACCTGACGCCTaGGCCACGTGTCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLFKPDA*ATCLPS
Trigger: GGAAGGCAGACACGTGGCCCAGGCGTCAGGTTTGAA...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR TCA 90 bp GTAGGTAAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATTCCCAGGGCAGGGCCTaGCTGTGCGACGATGACACT +
Preference number: 4 (lower is better)
Translates to: VGKNLLGGHLSRMQPIVHSQGRA*LCDDDT
Trigger: AGTGTCATCGTCGCACAGTCAGGCCCTGCCCTGGGA...ATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTTACCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR TCA 90 bp GGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGTCCCAGGGCAGGGCCTaGCTGTGCGACGATGACACT +
Preference number: 4 (lower is better)
Translates to: GALSMNRTNHITCRIHSESQGRA*LCDDDT
Trigger: AGTGTCATCGTCGCACAGTCAGGCCCTGCCCTGGGA...CTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR TCA 90 bp GGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGAGCGGTGCTTGTGGATaGCGGCCTCCGTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: GALSMNRTNHITCRIHSESGACG*RPPSPS
Trigger: TGAGGGAGACGGAGGCCGTCATCCACAAGCACCGCT...CTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp AAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATGAACCACACTGGGAGCAGCTGTaGCGACTTCACTCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: KNLLGGHLSRMQPIVHEPHWEQL*RLHSGP
Trigger: GGGACCCGAGTGAAGTCGGCACAGCTGCTCCCAGTG...TGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp GGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGCAGATGTGGGCCTGTaGCAGCTCTGTGGCGATGGC +
Preference number: 4 (lower is better)
Translates to: GSPLDEQNKSHNMQNPLRADVGL*QLCGDG
Trigger: GCCATCGCCACAGAGCTGGCACAGGCCCACATCTGC...TCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGGAGGTCGTTTTCAGATaGCTGGCAGATGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLEVVFR*LADVGL
Trigger: CAGGCCCACATCTGCCAGGCATCTGAAAACGACCTC...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp AAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAAGCACGTCCAAGAGCTaGAGGCTGGCCACGCCACAG +
Preference number: 4 (lower is better)
Translates to: KNLLGGHLSRMQPIVHEPSTSKS*RLATPQ
Trigger: CTGTGGCGTGGCCAGCCTGCAGCTCTTGGACGTGCT...TGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp ATGTGCGAGAGGGAAATGCAACTTTACTTTCCTGCTACCTATAGGGGCAACCACGTCCCGTATCTGCTCTaGCGACAGGACCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: MCEREMQLYFPATYRGNHVPYLL*RQDLAA
Trigger: AGCAGCGAGGTCCTGTCGGCAGAGCAGATACGGGAC...GTGGTTGCCCCTATAGGTAGCAGGAAAGTAAAGTTGCATTTCCCTCTCGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR GCA 90 bp TCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACTGCACGTCCCGTATCTaGTCTGCCGACAGGACCTCG +
Preference number: 4 (lower is better)
Translates to: SQSHCWHRGALFMRFKGHCTSRI*SADRTS
Trigger: CGAGGTCCTGTCGGCAGAGCAGATACGGGACGTGCA...GTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp AGAATCCACTCAGAGGCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGGGCATCAGTGTTTCCTaGACGTCCCGTATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: RIHSEAVIPGKEWAGVLRGISVS*TSRICS
Trigger: AGAGCAGATACGGGACGTGCAGGAAACACTGATGCC...CCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGCCTCTGAGTGGATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp CACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAGCTGCGCACGTGAGGCTTGGCATCAGTGTTTCCTaGACGTCCCGTATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: HLSRMQPIVHEPAAHVRLGISVS*TSRICS
Trigger: AGAGCAGATACGGGACGTGCAGGAAACACTGATGCC...AAGCCTCACGTGCGCAGCTGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp ATACGGCATTTCCCCCGTGTGAACACAATGGCTTCCGGTAACACTACCCACTTAGCACCCTTGACACACTaGAGCCAGGTGACCAAGGTG +
Preference number: 4 (lower is better)
Translates to: IRHFPRVNTMASGNTTHLAPLTH*SQVTKV
Trigger: CACCTTGGTCACCTGGCTGCAGTGTGTCAAGGGTGC...TAAGTGGGTAGTGTTACCGGAAGCCATTGTGTTCACACGGGGGAAATGCCGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR GCA 90 bp CACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTGAAACCAGCGTGACAGGTACTGGACACTaGTCTGATAGTAGGATTTTG +
Preference number: 4 (lower is better)
Translates to: HKLWLRWGQGCAVAETSVTGTGH*SDSRIL
Trigger: CAAAATCCTACTATCAGAGCAGTGTCCAGTACCTGT...CACGCTGGTTTCAGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGCTGTCACAGTCTCACTaGTGGCACAGAGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLLSQSH*WHRGAL
Trigger: CAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAG...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp CACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCAGGTGGCAGTCGGTGATGTCGTaGCACAGGGCAGGGAGGATC +
Preference number: 4 (lower is better)
Translates to: HRGALFMRFKGHKLWLRWQSVMS*HRAGRI
Trigger: GATCCTCCCTGCCCTGTGCCACGACATCACCGACTG...CCACCTGAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp GAGGAGTACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTCGTTTTCAGATGCCTaGCAGATGTGGGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: EEYILAVTVSLLAQRCLVSFSDA*QMWACA
Trigger: GGCACAGGCCCACATCTGCCAGGCATCTGAAAACGA...AACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGTACTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp CTGCGGGAGGAGCGGCTGCGACTTACTTTTAATTTCAAATCAGCTGCAGATGTTCCAAGAGCTGCAGGCTaGCCACGCCACAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LREERLRLTFNFKSAADVPRAAG*PRHSPH
Trigger: ATGAGGACTGTGGCGTGGCCAGCCTGCAGCTCTTGG...AACATCTGCAGCTGATTTGAAATTAAAAGTAAGTCGCAGCCGCTCCTCCCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp CACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCAGGTGGCCGTCTCGAGGTAGCTaGGAAACTGCCCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: HRGALFMRFKGHKLWLRWPSRGS*ETAPGS
Trigger: ACTCCCAGGGGCAGTTTCCCAGCTACCTCGAGACGG...CCACCTGAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGCATGCCACTGCAGATTaGGGGCCAGGATGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLHATAD*GPGCPL
Trigger: CAAAGGACATCCTGGCCCCCAATCTGCAGTGGCATG...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp AGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTCCATCCTCACATCGTTaGACACGTCATCTAGGCGTT +
Preference number: 4 (lower is better)
Translates to: RFKGHKLWLRWGQGCAVAPSSHR*TRHLGV
Trigger: AACGCCTAGATGACGTGTCCAACGATGTGAGGATGG...AGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp TATATACGGCATTTCCCCCGTGTGAACACAATGGCTTCCGGTAACACTACCCACTGGCTGAAACCAGCGTaGTCACTGTGTGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: YIRHFPRVNTMASGNTTHWLKPA*SLCGWH
Trigger: GTGCCAGCCACACAGTGACCACGCTGGTTTCAGCCA...GTGGGTAGTGTTACCGGAAGCCATTGTGTTCACACGGGGGAAATGCCGTATATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR CCA 90 bp GAGGAGTACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTAAAGGCCACAAACTCTaGCTCAGGTGGGGACAAGGG +
Preference number: 4 (lower is better)
Translates to: EEYILAVTVSLLAQRCLVKGHKL*LRWGQG
Trigger: CCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTT...AACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGTACTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp CAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAATCTTGGAGAGGTTCCTaGAGACGAGCTCCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: QSHCWHRGALFMRFKGHKSWRGS*RRAPGS
Trigger: GCTGCCGGGAGCTCGTCTTCAGGAACCTCTCCAAGA...TTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR TCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGTCTGGATCGTCAAGGTaGACCAGCAACTCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLSGSSR*TSNSRY
Trigger: GTACCGAGAGTTGCTGGTTCACCTTGACGATCCAGA...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp ATACGGCATTTCCCCCGTGTGAACACAATGGCTTCCGGTAACACTACCCACTTAAATCTAAGATGCTGCTaGAGTGGCTGCGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: IRHFPRVNTMASGNTTHLNLRCC*SGCGRS
Trigger: GCTCCTCCCGCAGCCACTTCAGCAGCATCTTAGATT...TAAGTGGGTAGTGTTACCGGAAGCCATTGTGTTCACACGGGGGAAATGCCGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR GCA 90 bp TTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAACCGCCCGCCGGACCTaGGGGACGTCATCAAACAGT +
Preference number: 4 (lower is better)
Translates to: LLSQSHCWHRGALFMRFKTARRT*GTSSNS
Trigger: ACTGTTTGATGACGTCCCGCAGGTCCGGCGGGCGGT...TTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp ACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTCTCCTTCTGCCACTaGAGGCCAACGTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TFLLSQSHCWHRGALFMRFSFCH*RPTSSQ
Trigger: CTGGGAGGACGTTGGCCTGCAGTGGCAGAAGGAGAA...TCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp GTAGGTAAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATGGGGACCAATGTGCTTaGGGTAGAGGTCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VGKNLLGGHLSRMQPIVHGDQCA*GRGPGS
Trigger: GCTGCCAGGACCTCTACCGCAAGCACATTGGTCCCC...ATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTTACCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp CAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAAGGGGACCAATGTGCTTaGGGTAGAGGTCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: QSHCWHRGALFMRFKGHKGDQCA*GRGPGS
Trigger: GCTGCCAGGACCTCTACCGCAAGCACATTGGTCCCC...TTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp TGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACGAGCTCCGGCGAGTGTaGGGTCCAGTCAAGGTGCGA +
Preference number: 4 (lower is better)
Translates to: CLGALSMNRTNHITCRIHELRRV*GPVKVR
Trigger: TCGCACCTTGACTGGACCGCACACTCGCCGGAGCTC...GTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp GATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTCCCCGGGCAGGAGGCGTTaGACCGAAGCTGCTGGGACG +
Preference number: 4 (lower is better)
Translates to: DEQNKSHNMQNPLRGCYSPGRRR*TEAAGT
Trigger: CGTCCCAGCAGCTTCGGTGCAACGCCTCCTGCCCGG...GGAATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR CCA 90 bp TTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAACGCCTGTGGCTTCAATaGCGGCCACACGGACCTTCC +
Preference number: 4 (lower is better)
Translates to: LLSQSHCWHRGALFMRFKRLWLQ*RPHGPS
Trigger: GGAAGGTCCGTGTGGCCGCCATTGAAGCCACAGGCG...TTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp TGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACCGCCTGTGGCTTCAATaGCGGCCACACGGACCTTCC +
Preference number: 4 (lower is better)
Translates to: CLGALSMNRTNHITCRIHRLWLQ*RPHGPS
Trigger: GGAAGGTCCGTGTGGCCGCCATTGAAGCCACAGGCG...GTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp TTAATTTCAAATCAGCTGCAGATGTTTGGGAGCCCTCTCGATGAACAGAACAAAGACAGGCCCTCAGCGTaGGCACGACGTGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LISNQLQMFGSPLDEQNKDRPSA*ARRVAG
Trigger: CCCTGCCACACGTCGTGCCCACGCTGAGGGCCTGTC...TTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGATTTGAAATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp TCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACTGGCTGAAACCAGCGTaGTCACTGTGTGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SQSHCWHRGALFMRFKGHWLKPA*SLCGWH
Trigger: GTGCCAGCCACACAGTGACCACGCTGGTTTCAGCCA...GTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp ACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGAGACAAGGGTGTGCCGTaGCTGAAACCAGCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: TFLLSQSHCWHRGALFMRDKGVP*LKPAWS
Trigger: TGACCACGCTGGTTTCAGCCACGGCACACCCTTGTC...TCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp AAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAAAGATGCTGCTGAAGTaGCTGCGGGAGGAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: KNLLGGHLSRMQPIVHEPKMLLK*LREERL
Trigger: CAGCCGCTCCTCCCGCAGCCACTTCAGCAGCATCTT...TGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp CAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAAGAAACACCTCAGGGCTaGCAAACGTCCCGACGAGCT +
Preference number: 4 (lower is better)
Translates to: QSHCWHRGALFMRFKGHKETPQG*QTSRRA
Trigger: AGCTCGTCGGGACGTTTGTCAGCCCTGAGGTGTTTC...TTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR TCA 90 bp GGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAACGCCACAGTCCTCATaGCACACAGACACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GSPLDEQNKSHNMQNPLRTPQSS*HTDTRA
Trigger: GGCTCTGGTGTCTGTGTGTCATGAGGACTGTGGCGT...TCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR TCA 90 bp AGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTGTTGATAATACGGCATaGGATCAGTCGCGTCATCTT +
Preference number: 4 (lower is better)
Translates to: RFKGHKLWLRWGQGCAVAVDNTA*DQSRHL
Trigger: AAGATGACGCGACTGATCTCATGCCGTATTATCAAC...AGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp GATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTCCCACACTGCAGCCAGGTaGCCAAGGTGGAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: DEQNKSHNMQNPLRGCYSHTAAR*PRWRRL
Trigger: CAGCCGCCTCCACCTTGGTCACCTGGCTGCAGTGTG...GGAATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp TTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAAGGGTGTGCCGTGGCTaGAACCAGCGTGGTCACTGT +
Preference number: 4 (lower is better)
Translates to: LLSQSHCWHRGALFMRFKRVCRG*NQRGHC
Trigger: ACAGTGACCACGCTGGTTTCAGCCACGGCACACCCT...TTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp TCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACGCAGCCAATAGTTCATaGACCAGCTGCGCACGTGAG +
Preference number: 4 (lower is better)
Translates to: SQSHCWHRGALFMRFKGHAANSS*TSCARE
Trigger: CTCACGTGCGCAGCTGGTTCATGAACTATTGGCTGC...GTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp CTGCGGGAGGAGCGGCTGCGACTTACTTTTAATTTCAAATCAGCTGCAGATGTTGAAAAAGAAGCACGCTaGCGGGTGAGCCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: LREERLRLTFNFKSAADVEKEAR*RVSHLL
Trigger: CAGCAAGTGGCTCACCCGTCAGCGTGCTTCTTTTTC...AACATCTGCAGCTGATTTGAAATTAAAAGTAAGTCGCAGCCGCTCCTCCCGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR GCA 90 bp TGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCCCACGGACTTCCCGTTaGCAAAATGGATCACTGCGC +
Preference number: 4 (lower is better)
Translates to: CWHRGALFMRFKGHKLWLPRTSR*QNGSLR
Trigger: GCGCAGTGATCCATTTTGGCAACGGGAAGTCCGTGG...GAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp CAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAATTCTCCTTCTGCCACTaGAGGCCAACGTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QSHCWHRGALFMRFKGHKFSFCH*RPTSSQ
Trigger: CTGGGAGGACGTTGGCCTGCAGTGGCAGAAGGAGAA...TTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp TGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCACGATGACACTGAACTaGAGGAGCTCCGGCGAGTGT +
Preference number: 4 (lower is better)
Translates to: CWHRGALFMRFKGHKLWLTMTLN*RSSGEC
Trigger: ACACTCGCCGGAGCTCCTGCAGTTCAGTGTCATCGT...GAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp GATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTCCGGCACGGCCTGCACATaGTGCAGGAGCTGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: DEQNKSHNMQNPLRGCYSGTACT*CRSCSQ
Trigger: CTGCGAGCAGCTCCTGCAGCATGTGCAGGCCGTGCC...GGAATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp TGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCCTGTCACAGTCTCACTaGTGGCACAGAGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: CWHRGALFMRFKGHKLWLLSQSH*WHRGAL
Trigger: CAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAG...GAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp ATGTGCGAGAGGGAAATGCAACTTTACTTTCCTGCTACCTATAGGGGCAACCACACCTTCCAGTGCTGGTaGGAGATGGTCTGCATCAGG +
Preference number: 4 (lower is better)
Translates to: MCEREMQLYFPATYRGNHTFQCW*EMVCIR
Trigger: CCTGATGCAGACCATCTCCCACCAGCACTGGAAGGT...GTGGTTGCCCCTATAGGTAGCAGGAAAGTAAAGTTGCATTTCCCTCTCGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR CCA 90 bp ACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGAGATCTGGTACAACTTTaGACCACGGCTGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: TFLLSQSHCWHRGALFMRDLVQL*TTAASS
Trigger: CGAGGAGGCAGCCGTGGTCCAAAGTTGTACCAGATC...TCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp GATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTCCCGCATCTGCGGGTCTTaGGAGGGCTGCAGACAGGCC +
Preference number: 4 (lower is better)
Translates to: DEQNKSHNMQNPLRGCYSRICGS*EGCRQA
Trigger: GGCCTGTCTGCAGCCCTCCCAAGACCCGCAGATGCG...GGAATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp TGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCCATGCCACTGCAGATTaGGGGCCAGGATGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: CWHRGALFMRFKGHKLWLHATAD*GPGCPL
Trigger: CAAAGGACATCCTGGCCCCCAATCTGCAGTGGCATG...GAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp AAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAAGGGTGGTCAGGACCTaGGGCATCAGTGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: KNLLGGHLSRMQPIVHEPRVVRT*GISVSC
Trigger: GCAGGAAACACTGATGCCCCAGGTCCTGACCACCCT...TGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp ACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGACCTGATGAGTTTCTCTaGATCCGTCATGCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: TFLLSQSHCWHRGALFMRPDEFL*IRHAAR
Trigger: TCGGGCGGCATGACGGATCCAGAGAAACTCATCAGG...TCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp CTGCGGGAGGAGCGGCTGCGACTTACTTTTAATTTCAAATCAGCTGCAGATGTTCCTGATGAGTTTCTCTaGATCCGTCATGCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: LREERLRLTFNFKSAADVPDEFL*IRHAAR
Trigger: TCGGGCGGCATGACGGATCCAGAGAAACTCATCAGG...AACATCTGCAGCTGATTTGAAATTAAAAGTAAGTCGCAGCCGCTCCTCCCGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp CAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAATGGCTGAAACCAGCGTaGTCACTGTGTGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: QSHCWHRGALFMRFKGHKWLKPA*SLCGWH
Trigger: GTGCCAGCCACACAGTGACCACGCTGGTTTCAGCCA...TTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp TTAATTTCAAATCAGCTGCAGATGTTTGGGAGCCCTCTCGATGAACAGAACAAAGACCAGCTGGTGTCTTaGAGGGCCTCCCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: LISNQLQMFGSPLDEQNKDQLVS*RASPRS
Trigger: GCTGCGTGGGGAGGCCCTCCAAGACACCAGCTGGTC...TTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGATTTGAAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR CCA 90 bp GGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAATGTACTCGCTGCTCTaGCTCGAAGTCAGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: GSPLDEQNKSHNMQNPLRMYSLL*LEVRPR
Trigger: GCGAGGCCTGACTTCGAGCCAGAGCAGCGAGTACAT...TCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR CCA 90 bp AGATGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCGCCTTGAGCCGTTGCTaGGGACCTCGCGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: RCLGALSMNRTNHITCRIALSRC*GPRDVS
Trigger: GCTCACATCGCGAGGTCCCCAGCAACGGCTCAAGGC...GATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR TCA 90 bp TCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTCCACCACCCAGTCGGTaGTGTCGTGGCACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SMNRTNHITCRIHSEAVIPPPSR*CRGTGQ
Trigger: CTGCCCTGTGCCACGACATCACCGACTGGGTGGTGG...AATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR TCA 90 bp CACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGGCCCGCTGCCCTCTTTaGGGACCTCTAAAATTGCAT +
Preference number: 4 (lower is better)
Translates to: HCWHRGALFMRFKGHKLWARCPL*GPLKLH
Trigger: ATGCAATTTTAGAGGTCCTCAAAGAGGGCAGCGGGC...CCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp TCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACGCCCGCTGCCCTCTTTaGGGACCTCTAAAATTGCAT +
Preference number: 4 (lower is better)
Translates to: SQSHCWHRGALFMRFKGHARCPL*GPLKLH
Trigger: ATGCAATTTTAGAGGTCCTCAAAGAGGGCAGCGGGC...GTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp AGATGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCAGGGTGTGCCGTGGCTaGAACCAGCGTGGTCACTGT +
Preference number: 4 (lower is better)
Translates to: RCLGALSMNRTNHITCRIRVCRG*NQRGHC
Trigger: ACAGTGACCACGCTGGTTTCAGCCACGGCACACCCT...GATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp CACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGAGTGGGCAGGTGTCCTaGGGAGTACATTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: HCWHRGALFMRFKGHKLWSGQVS*GVHSCC
Trigger: ACAGCAAGAATGTACTCCTCAGGACACCTGCCCACT...CCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp CTGCGGGAGGAGCGGCTGCGACTTACTTTTAATTTCAAATCAGCTGCAGATGTTAGTGGGCAGGTGTCCTaGGGAGTACATTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LREERLRLTFNFKSAADVSGQVS*GVHSCC
Trigger: ACAGCAAGAATGTACTCCTCAGGACACCTGCCCACT...AACATCTGCAGCTGATTTGAAATTAAAAGTAAGTCGCAGCCGCTCCTCCCGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp CAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAAGCAGCCAATAGTTCATaGACCAGCTGCGCACGTGAG +
Preference number: 4 (lower is better)
Translates to: QSHCWHRGALFMRFKGHKAANSS*TSCARE
Trigger: CTCACGTGCGCAGCTGGTTCATGAACTATTGGCTGC...TTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp CAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAAGGCATTTCCCCCGTGTaGACACAATGGCTTCCGGTA +
Preference number: 4 (lower is better)
Translates to: QSHCWHRGALFMRFKGHKGISPV*TQWLPV
Trigger: TACCGGAAGCCATTGTGTTCACACGGGGGAAATGCC...TTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR GCA 90 bp AAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAATCAGAGACTCCGACTaGATGTGGAAGTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: KNLLGGHLSRMQPIVHEPIRDSD*MWKWSG
Trigger: GCCCGACCACTTCCACATGCAGTCGGAGTCTCTGAT...TGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR GCA 90 bp TGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACTGGTGGGAGATGGTCTaGATCAGGGGCCCGATCAGA +
Preference number: 4 (lower is better)
Translates to: CLGALSMNRTNHITCRIHWWEMV*IRGPIR
Trigger: TCTGATCGGGCCCCTGATGCAGACCATCTCCCACCA...GTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR GCA 90 bp TCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTAGGCTGGCAGCCAGCTaGCTGACCTCAGGCACCTCG +
Preference number: 4 (lower is better)
Translates to: SMNRTNHITCRIHSEAVIRLAAS*LTSGTS
Trigger: CGAGGTGCCTGAGGTCAGGCAGCTGGCTGCCAGCCT...AATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp TTAATTTCAAATCAGCTGCAGATGTTTGGGAGCCCTCTCGATGAACAGAACAAAACTTTGGACCACGGCTaGCTCCTCGTCGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LISNQLQMFGSPLDEQNKTLDHG*LLVGAG
Trigger: GCCTGCACCGACGAGGAGGCAGCCGTGGTCCAAAGT...TTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGATTTGAAATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp GATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTCCAGCACGTCCAAGAGCTaGAGGCTGGCCACGCCACAG +
Preference number: 4 (lower is better)
Translates to: DEQNKSHNMQNPLRGCYSSTSKS*RLATPQ
Trigger: CTGTGGCGTGGCCAGCCTGCAGCTCTTGGACGTGCT...GGAATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp AGATGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCTGCACGTCCCGTATCTaGTCTGCCGACAGGACCTCG +
Preference number: 4 (lower is better)
Translates to: RCLGALSMNRTNHITCRICTSRI*SADRTS
Trigger: CGAGGTCCTGTCGGCAGAGCAGATACGGGACGTGCA...GATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp TTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAACAAGGTGGAGGCGGCTaGCATCCTCACATCGTTGGA +
Preference number: 4 (lower is better)
Translates to: LLSQSHCWHRGALFMRFKQGGGG*HPHIVG
Trigger: TCCAACGATGTGAGGATGGCAGCCGCCTCCACCTTG...TTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGTGCGGGAGGAGCGGCTaGGACTTACTTTTAATTTCA +
Preference number: 4 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLCGRSG*DLLLIS
Trigger: TGAAATTAAAAGTAAGTCGCAGCCGCTCCTCCCGCA...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp CAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAAACGCAATGTACTCGCTaGTCTGGCTCGAAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: QSHCWHRGALFMRFKGHKTQCTR*SGSKSG
Trigger: GCCTGACTTCGAGCCAGAGCAGCGAGTACATTGCGT...TTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR CCA 90 bp CAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACGAGCTCTGCGGATCTaGTACAACTTTGGACCACGG +
Preference number: 4 (lower is better)
Translates to: QSHCWHRGALFMRFKGHKRALRI*YNFGPR
Trigger: CCGTGGTCCAAAGTTGTACCAGATCCGCAGAGCTCG...TTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp CAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAATCGTTTTCAGATGCCTaGCAGATGTGGGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: QSHCWHRGALFMRFKGHKSFSDA*QMWACA
Trigger: GGCACAGGCCCACATCTGCCAGGCATCTGAAAACGA...TTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp GATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTCCCCTCACCAGGAGATCTaGGAACAGCCCGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: DEQNKSHNMQNPLRGCYSPHQEI*EQPAAL
Trigger: GAGGGCAGCGGGCTGTTCCCAGATCTCCTGGTGAGG...GGAATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp CAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAAAAAGGCCACAAACTCTaGCTCAGGTGGGGACAAGGG +
Preference number: 4 (lower is better)
Translates to: QSHCWHRGALFMRFKGHKKGHKL*LRWGQG
Trigger: CCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTT...TTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp GGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAAGTGGGCAGGTGTCCTaGGGAGTACATTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GSPLDEQNKSHNMQNPLRSGQVS*GVHSCC
Trigger: ACAGCAAGAATGTACTCCTCAGGACACCTGCCCACT...TCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp TTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAAATCTAAGATGCTGCTaGAGTGGCTGCGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LLSQSHCWHRGALFMRFKNLRCC*SGCGRS
Trigger: GCTCCTCCCGCAGCCACTTCAGCAGCATCTTAGATT...TTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp GGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGCCAAAATGGATCACTaGGCCTGTGGCTTCAATGGC +
Preference number: 4 (lower is better)
Translates to: GSPLDEQNKSHNMQNPLRAKMDH*ACGFNG
Trigger: GCCATTGAAGCCACAGGCGCAGTGATCCATTTTGGC...TCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp TCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTCACTGGGAGCAGCTGTaGCGACTTCACTCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SMNRTNHITCRIHSEAVIHWEQL*RLHSGP
Trigger: GGGACCCGAGTGAAGTCGGCACAGCTGCTCCCAGTG...AATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp TTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAACGTCCCGACGAGCTCTaGGGATCTGGTACAACTTTG +
Preference number: 4 (lower is better)
Translates to: LLSQSHCWHRGALFMRFKRPDEL*GSGTTL
Trigger: CAAAGTTGTACCAGATCCGCAGAGCTCGTCGGGACG...TTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp GATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTCCGTCCCGTATCTGCTCTaGCGACAGGACCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: DEQNKSHNMQNPLRGCYSVPYLL*RQDLAA
Trigger: AGCAGCGAGGTCCTGTCGGCAGAGCAGATACGGGAC...GGAATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp ATACGGCATTTCCCCCGTGTGAACACAATGGCTTCCGGTAACACTACCCACTTATGCGGGAGGAGCGGCTaGGACTTACTTTTAATTTCA +
Preference number: 4 (lower is better)
Translates to: IRHFPRVNTMASGNTTHLCGRSG*DLLLIS
Trigger: TGAAATTAAAAGTAAGTCGCAGCCGCTCCTCCCGCA...TAAGTGGGTAGTGTTACCGGAAGCCATTGTGTTCACACGGGGGAAATGCCGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR GCA 90 bp GAGGAGTACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTCTTGGGTGTAGAATGTaGGAGAGGGAAATGCAACTT +
Preference number: 4 (lower is better)
Translates to: EEYILAVTVSLLAQRCLVLGCRM*EREMQL
Trigger: AAGTTGCATTTCCCTCTCGCACATTCTACACCCAAG...AACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGTACTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR CCA 90 bp AGATGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCAGGGTGGTCAGGACCTaGGGCATCAGTGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RCLGALSMNRTNHITCRIRVVRT*GISVSC
Trigger: GCAGGAAACACTGATGCCCCAGGTCCTGACCACCCT...GATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp TGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCCCATCCTCACATCGTTaGACACGTCATCTAGGCGTT +
Preference number: 4 (lower is better)
Translates to: CWHRGALFMRFKGHKLWLPSSHR*TRHLGV
Trigger: AACGCCTAGATGACGTGTCCAACGATGTGAGGATGG...GAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp AGATGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCGACAAGGGTGTGCCGTaGCTGAAACCAGCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RCLGALSMNRTNHITCRIDKGVP*LKPAWS
Trigger: TGACCACGCTGGTTTCAGCCACGGCACACCCTTGTC...GATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp CTGCGGGAGGAGCGGCTGCGACTTACTTTTAATTTCAAATCAGCTGCAGATGTTTCACAGTCTCACTGCTaGCACAGAGGTGCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LREERLRLTFNFKSAADVSQSHC*HRGALF
Trigger: AAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA...AACATCTGCAGCTGATTTGAAATTAAAAGTAAGTCGCAGCCGCTCCTCCCGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp CTGCGGGAGGAGCGGCTGCGACTTACTTTTAATTTCAAATCAGCTGCAGATGTTTCATCAAACAGTCGCTaGGCAAAATGGGAAAGCACG +
Preference number: 4 (lower is better)
Translates to: LREERLRLTFNFKSAADVSSNSR*AKWEST
Trigger: CGTGCTTTCCCATTTTGCTCAGCGACTGTTTGATGA...AACATCTGCAGCTGATTTGAAATTAAAAGTAAGTCGCAGCCGCTCCTCCCGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR TCA 90 bp TGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCTGGATCGTCAAGGTaGACCAGCAACTCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: CLGALSMNRTNHITCRIHSGSSR*TSNSRY
Trigger: GTACCGAGAGTTGCTGGTTCACCTTGACGATCCAGA...GTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGGAGGTGCCTTGTTTATaGGATTTAAAGGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLEVPCL*DLKATN
Trigger: GTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTC...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp CACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGAACCAGCTGCGCACGTaGGGCTTAAAATCTAAGATG +
Preference number: 4 (lower is better)
Translates to: HCWHRGALFMRFKGHKLWNQLRT*GLKSKM
Trigger: CATCTTAGATTTTAAGCCTCACGTGCGCAGCTGGTT...CCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp TGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACGGCATCAGTGTTTCCTaGACGTCCCGTATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CLGALSMNRTNHITCRIHGISVS*TSRICS
Trigger: AGAGCAGATACGGGACGTGCAGGAAACACTGATGCC...GTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp GAGGAGTACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTACAGGTACTGGACACTaGTCTGATAGTAGGATTTTG +
Preference number: 4 (lower is better)
Translates to: EEYILAVTVSLLAQRCLVTGTGH*SDSRIL
Trigger: CAAAATCCTACTATCAGAGCAGTGTCCAGTACCTGT...AACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGTACTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp TTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAATTCCCGTTGCCAAAATaGATCACTGCGCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LLSQSHCWHRGALFMRFKFPLPK*ITAPVA
Trigger: AGCCACAGGCGCAGTGATCCATTTTGGCAACGGGAA...TTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp TTAATTTCAAATCAGCTGCAGATGTTTGGGAGCCCTCTCGATGAACAGAACAAAAATCCTCCTCCAGGGTaGTCAGGACCTGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: LISNQLQMFGSPLDEQNKNPPPG*SGPGAS
Trigger: TGATGCCCCAGGTCCTGACCACCCTGGAGGAGGATT...TTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGATTTGAAATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp AGATGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCTGGATGGCCCTCTCTaGATCGTCAAGGTGAACCAG +
Preference number: 4 (lower is better)
Translates to: RCLGALSMNRTNHITCRILDGPL*IVKVNQ
Trigger: CTGGTTCACCTTGACGATCCAGAGAGGGCCATCCAG...GATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp TCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAATTGCATCCTGGATaGCCCTCTCTGGATCGTCAA +
Preference number: 4 (lower is better)
Translates to: SQSHCWHRGALFMRFKGHKLHPG*PSLDRQ
Trigger: TTGACGATCCAGAGAGGGCCATCCAGGATGCAATTT...GTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp GATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTCCGACAAGGGTGTGCCGTaGCTGAAACCAGCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: DEQNKSHNMQNPLRGCYSDKGVP*LKPAWS
Trigger: TGACCACGCTGGTTTCAGCCACGGCACACCCTTGTC...GGAATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp GGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGTCACAGTCTCACTGCTaGCACAGAGGTGCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: GALSMNRTNHITCRIHSESQSHC*HRGALF
Trigger: AAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA...CTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp TTAATTTCAAATCAGCTGCAGATGTTTGGGAGCCCTCTCGATGAACAGAACAAAAATCTAAGATGCTGCTaGAGTGGCTGCGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LISNQLQMFGSPLDEQNKNLRCC*SGCGRS
Trigger: GCTCCTCCCGCAGCCACTTCAGCAGCATCTTAGATT...TTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGATTTGAAATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp GATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTCCGAGGTCGTTTTCAGATaGCTGGCAGATGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: DEQNKSHNMQNPLRGCYSEVVFR*LADVGL
Trigger: CAGGCCCACATCTGCCAGGCATCTGAAAACGACCTC...GGAATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp GATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTCCACGATGACACTGAACTaGAGGAGCTCCGGCGAGTGT +
Preference number: 4 (lower is better)
Translates to: DEQNKSHNMQNPLRGCYSTMTLN*RSSGEC
Trigger: ACACTCGCCGGAGCTCCTGCAGTTCAGTGTCATCGT...GGAATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp TTAATTTCAAATCAGCTGCAGATGTTTGGGAGCCCTCTCGATGAACAGAACAAACTGTCACAGTCTCACTaGTGGCACAGAGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LISNQLQMFGSPLDEQNKLSQSH*WHRGAL
Trigger: CAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAG...TTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGATTTGAAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp TTAATTTCAAATCAGCTGCAGATGTTTGGGAGCCCTCTCGATGAACAGAACAAACGAGCTCTGCGGATCTaGTACAACTTTGGACCACGG +
Preference number: 4 (lower is better)
Translates to: LISNQLQMFGSPLDEQNKRALRI*YNFGPR
Trigger: CCGTGGTCCAAAGTTGTACCAGATCCGCAGAGCTCG...TTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGATTTGAAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp TTAATTTCAAATCAGCTGCAGATGTTTGGGAGCCCTCTCGATGAACAGAACAAACATGCCACTGCAGATTaGGGGCCAGGATGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LISNQLQMFGSPLDEQNKHATAD*GPGCPL
Trigger: CAAAGGACATCCTGGCCCCCAATCTGCAGTGGCATG...TTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGATTTGAAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp TTAATTTCAAATCAGCTGCAGATGTTTGGGAGCCCTCTCGATGAACAGAACAAACCTGATGAGTTTCTCTaGATCCGTCATGCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: LISNQLQMFGSPLDEQNKPDEFL*IRHAAR
Trigger: TCGGGCGGCATGACGGATCCAGAGAAACTCATCAGG...TTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGATTTGAAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp TTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAACCATCCTCACATCGTTaGACACGTCATCTAGGCGTT +
Preference number: 4 (lower is better)
Translates to: LLSQSHCWHRGALFMRFKPSSHR*TRHLGV
Trigger: AACGCCTAGATGACGTGTCCAACGATGTGAGGATGG...TTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp TTAATTTCAAATCAGCTGCAGATGTTTGGGAGCCCTCTCGATGAACAGAACAAACTGGATGGCCCTCTCTaGATCGTCAAGGTGAACCAG +
Preference number: 4 (lower is better)
Translates to: LISNQLQMFGSPLDEQNKLDGPL*IVKVNQ
Trigger: CTGGTTCACCTTGACGATCCAGAGAGGGCCATCCAG...TTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGATTTGAAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp GATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTCCTCTGGATCGTCAAGGTaGACCAGCAACTCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: DEQNKSHNMQNPLRGCYSSGSSR*TSNSRY
Trigger: GTACCGAGAGTTGCTGGTTCACCTTGACGATCCAGA...GGAATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp TTAATTTCAAATCAGCTGCAGATGTTTGGGAGCCCTCTCGATGAACAGAACAAAGCCCGCTGCCCTCTTTaGGGACCTCTAAAATTGCAT +
Preference number: 4 (lower is better)
Translates to: LISNQLQMFGSPLDEQNKARCPL*GPLKLH
Trigger: ATGCAATTTTAGAGGTCCTCAAAGAGGGCAGCGGGC...TTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGATTTGAAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp TTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAAACCAGCTGCGCACGTaGGGCTTAAAATCTAAGATG +
Preference number: 4 (lower is better)
Translates to: LLSQSHCWHRGALFMRFKNQLRT*GLKSKM
Trigger: CATCTTAGATTTTAAGCCTCACGTGCGCAGCTGGTT...TTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp TTAATTTCAAATCAGCTGCAGATGTTTGGGAGCCCTCTCGATGAACAGAACAAAGCCAAAATGGATCACTaGGCCTGTGGCTTCAATGGC +
Preference number: 4 (lower is better)
Translates to: LISNQLQMFGSPLDEQNKAKMDH*ACGFNG
Trigger: GCCATTGAAGCCACAGGCGCAGTGATCCATTTTGGC...TTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGATTTGAAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp TCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTCCACGGACTTCCCGTTaGCAAAATGGATCACTGCGC +
Preference number: 4 (lower is better)
Translates to: SMNRTNHITCRIHSEAVIPRTSR*QNGSLR
Trigger: GCGCAGTGATCCATTTTGGCAACGGGAAGTCCGTGG...AATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR GCA 90 bp AGATGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCTCTCTGGATCCGTCATaGCGCCCGAGGTTTTTAAGA +
Preference number: 4 (lower is better)
Translates to: RCLGALSMNRTNHITCRISLDPS*RPRFLR
Trigger: TCTTAAAAACCTCGGGCGGCATGACGGATCCAGAGA...GATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp TCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACTGTGCGAGAGGGAAATaGAACTTTACTTTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: SQSHCWHRGALFMRFKGHCARGK*NFTFLL
Trigger: TAGCAGGAAAGTAAAGTTGCATTTCCCTCTCGCACA...GTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR CCA 90 bp TTAATTTCAAATCAGCTGCAGATGTTTGGGAGCCCTCTCGATGAACAGAACAAATTCCCGTTGCCAAAATaGATCACTGCGCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LISNQLQMFGSPLDEQNKFPLPK*ITAPVA
Trigger: AGCCACAGGCGCAGTGATCCATTTTGGCAACGGGAA...TTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGATTTGAAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CCA 90 bp TGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACAAATTGCATCCTGGATaGCCCTCTCTGGATCGTCAA +
Preference number: 4 (lower is better)
Translates to: CLGALSMNRTNHITCRIHKLHPG*PSLDRQ
Trigger: TTGACGATCCAGAGAGGGCCATCCAGGATGCAATTT...GTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp AGATGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCTCACAGTCTCACTGCTaGCACAGAGGTGCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: RCLGALSMNRTNHITCRISQSHC*HRGALF
Trigger: AAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA...GATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp AAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAGAGGTGCCTTGTTTATaGGATTTAAAGGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: KNLLGGHLSRMQPIVHEPEVPCL*DLKATN
Trigger: GTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTC...TGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp GTAGGTAAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATACTACCCACTTACAATaGGATCTTTTAGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: VGKNLLGGHLSRMQPIVHTTHLQ*DLLGTW
Trigger: CCAAGTGCCTAAAAGATCTCATTGTAAGTGGGTAGT...ATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTTACCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR GCA 90 bp TTAATTTCAAATCAGCTGCAGATGTTTGGGAGCCCTCTCGATGAACAGAACAAATCTCTGGATCCGTCATaGCGCCCGAGGTTTTTAAGA +
Preference number: 4 (lower is better)
Translates to: LISNQLQMFGSPLDEQNKSLDPS*RPRFLR
Trigger: TCTTAAAAACCTCGGGCGGCATGACGGATCCAGAGA...TTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGATTTGAAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp AGATGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCAAATTGCATCCTGGATaGCCCTCTCTGGATCGTCAA +
Preference number: 4 (lower is better)
Translates to: RCLGALSMNRTNHITCRIKLHPG*PSLDRQ
Trigger: TTGACGATCCAGAGAGGGCCATCCAGGATGCAATTT...GATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR TCA 90 bp GATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTCCTCATCAAACAGTCGCTaGGCAAAATGGGAAAGCACG +
Preference number: 4 (lower is better)
Translates to: DEQNKSHNMQNPLRGCYSSSNSR*AKWEST
Trigger: CGTGCTTTCCCATTTTGCTCAGCGACTGTTTGATGA...GGAATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR TCA 90 bp AGATGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCGTTGATAATACGGCATaGGATCAGTCGCGTCATCTT +
Preference number: 4 (lower is better)
Translates to: RCLGALSMNRTNHITCRIVDNTA*DQSRHL
Trigger: AAGATGACGCGACTGATCTCATGCCGTATTATCAAC...GATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp TCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTTCTCTGGATCCGTCATaGCGCCCGAGGTTTTTAAGA +
Preference number: 4 (lower is better)
Translates to: SMNRTNHITCRIHSEAVISLDPS*RPRFLR
Trigger: TCTTAAAAACCTCGGGCGGCATGACGGATCCAGAGA...AATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp TTAATTTCAAATCAGCTGCAGATGTTTGGGAGCCCTCTCGATGAACAGAACAAATGCGGGAGGAGCGGCTaGGACTTACTTTTAATTTCA +
Preference number: 4 (lower is better)
Translates to: LISNQLQMFGSPLDEQNKCGRSG*DLLLIS
Trigger: TGAAATTAAAAGTAAGTCGCAGCCGCTCCTCCCGCA...TTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGATTTGAAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR GCA 90 bp AGATGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCACAGGTACTGGACACTaGTCTGATAGTAGGATTTTG +
Preference number: 4 (lower is better)
Translates to: RCLGALSMNRTNHITCRITGTGH*SDSRIL
Trigger: CAAAATCCTACTATCAGAGCAGTGTCCAGTACCTGT...GATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CCA 90 bp GGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGACTCTACATCTTAAACTaGAAACAAGACAGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: GSPLDEQNKSHNMQNPLRLYILN*KQDSVS
Trigger: AGAAACACTGTCTTGTTTCCAGTTTAAGATGTAGAG...TCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS CCA 90 bp GGGTCGAGCAGGGAGCAGCGCAGCGCGCGCAGAGCGTCGTCCAGGTaGGGCGCGAGCGCGGCGCCGCACAGGTCCACGGCCAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: GSSREQRSARRASSR*GASAAPHRSTARPS
Trigger: GCTGGGCCTGGCCGTGGACCTGTGCGGCGCCGCGCTCGCGCCCCACCTGGACGACGCTCTGCGCGCGCTGCGCTGCTCCCTGCTCGACCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS GCA 90 bp TGGCAGATGTGGGCCTGTGCCAGCTCTGTGGCGATGGCTGCCAGGTaGGGCTGGAGGGCTTCTCGGGGGCAACCCCGCATGGCGGAGGCC +
Preference number: 5 (lower is better)
Translates to: WQMWACASSVAMAAR*GWRASRGQPRMAEA
Trigger: GGCCTCCGCCATGCGGGGTTGCCCCCGAGAAGCCCTCCAGCCGCACCTGGCAGCCATCGCCACAGAGCTGGCACAGGCCCACATCTGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS CCA 90 bp ATGTGGGCCTGTGCCAGCTCTGTGGCGATGGCTGCCAGGTGCGGCTaGAGGGCTTCTCGGGGGCAACCCCGCATGGCGGAGGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: MWACASSVAMAARCG*RASRGQPRMAEAST
Trigger: GGTGCTGGCCTCCGCCATGCGGGGTTGCCCCCGAGAAGCCCTCCAGCCGCACCTGGCAGCCATCGCCACAGAGCTGGCACAGGCCCACAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS GCA 90 bp GCTGGTGTCTTGGAGGGCCTCCCCACGCAGCCGGGCAGGAGGCGTTaGACCGAAGCTGCTGGGACGCCTGACTTGAGCCTCCCGCCAGAG +
Preference number: 5 (lower is better)
Translates to: AGVLEGLPTQPGRRR*TEAAGTPDLSLPPE
Trigger: CTCTGGCGGGAGGCTCAAGTCAGGCGTCCCAGCAGCTTCGGTGCAACGCCTCCTGCCCGGCTGCGTGGGGAGGCCCTCCAAGACACCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS TCA 90 bp AGCCGGGCAGGAGGCGTTGCACCGAAGCTGCTGGGACGCCTGACTTaGGCCTCCCGCCAGAGCACGAGTCTTGGGCCAAGTGCCGCCCTG +
Preference number: 5 (lower is better)
Translates to: SRAGGVAPKLLGRLT*ASRQSTSLGPSAAL
Trigger: CAGGGCGGCACTTGGCCCAAGACTCGTGCTCTGGCGGGAGGCTCAAGTCAGGCGTCCCAGCAGCTTCGGTGCAACGCCTCCTGCCCGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS TCA 90 bp CACGCAGCCGGGCAGGAGGCGTTGCACCGAAGCTGCTGGGACGCCTaGCTTGAGCCTCCCGCCAGAGCACGAGTCTTGGGCCAAGTGCCG +
Preference number: 5 (lower is better)
Translates to: HAAGQEALHRSCWDA*LEPPARARVLGQVP
Trigger: CGGCACTTGGCCCAAGACTCGTGCTCTGGCGGGAGGCTCAAGTCAGGCGTCCCAGCAGCTTCGGTGCAACGCCTCCTGCCCGGCTGCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS GCA 90 bp TCGGTGCAGGCCTGGAACAGGGTCCGGAGGACGACCTCCAGGTGCTaGGTGGCGTGGTCCTCGGCATGCAGCAGCAGCACTGGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SVQAWNRVRRTTSRC*VAWSSACSSSTGSS
Trigger: GCTGCTCCCAGTGCTGCTGCTGCATGCCGAGGACCACGCCACGCAGCACCTGGAGGTCGTCCTCCGGACCCTGTTCCAGGCCTGCACCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000437419.5
ENST00000440747.5
CDS GCA 90 bp TCGTCGGTGCAGGCCTGGAACAGGGTCCGGAGGACGACCTCCAGGTaGTGCGTGGCGTGGTCCTCGGCATGCAGCAGCAGCACTGGGAGC +
Preference number: 5 (lower is better)
Translates to: SSVQAWNRVRRTTSR*CVAWSSACSSSTGS
Trigger: GCTCCCAGTGCTGCTGCTGCATGCCGAGGACCACGCCACGCAGCACCTGGAGGTCGTCCTCCGGACCCTGTTCCAGGCCTGCACCGACGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000437419.5
ENST00000440747.5
CDS GCA 90 bp GGGCACCCGCACAGCAGGGACCTGCGTACAGCCGGCGCTCACAGCTaGGGTCAGCAGGAAGGTGCTCTGCGCAGACGATGGTCAGTGGCG +
Preference number: 5 (lower is better)
Translates to: GHPHSRDLRTAGAHS*GQQEGALRRRWSVA
Trigger: CGCCACTGACCATCGTCTGCGCAGAGCACCTTCCTGCTGACCGCAGCTGTGAGCGCCGGCTGTACGCAGGTCCCTGCTGTGCGGGTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS GCA 90 bp CAGACGCAGCCCTCAGCCCTCTTGGGCACCCGCACAGCAGGGACCTaGGTACAGCCGGCGCTCACAGCTGCGGTCAGCAGGAAGGTGCTC +
Preference number: 5 (lower is better)
Translates to: QTQPSALLGTRTAGT*VQPALTAAVSRKVL
Trigger: GAGCACCTTCCTGCTGACCGCAGCTGTGAGCGCCGGCTGTACGCAGGTCCCTGCTGTGCGGGTGCCCAAGAGGGCTGAGGGCTGCGTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS GCA 90 bp CCCGAAGACGCTGCAGAGCCGGGGAACGAGGGGCCCAGCGGCTGGTaGTCCGGGTTCCCTGCCCGAGCACATTCCTATTCACAGAGGGAC +
Preference number: 5 (lower is better)
Translates to: PEDAAEPGNEGPSGW*SGFPARAHSYSQRD
Trigger: GTCCCTCTGTGAATAGGAATGTGCTCGGGCAGGGAACCCGGAGCACCAGCCGCTGGGCCCCTCGTTCCCCGGCTCTGCAGCGTCTTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 90 bp TACTCGCTGCTCTGGCTCGAAGTCAGGCCTCGCGGTGAGACCAGCTaGTGTCTTGGAGGGCCTCCCCACGCAGCCGGGCAGGAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: YSLLWLEVRPRGETS*CLGGPPHAAGQEAL
Trigger: CAACGCCTCCTGCCCGGCTGCGTGGGGAGGCCCTCCAAGACACCAGCTGGTCTCACCGCGAGGCCTGACTTCGAGCCAGAGCAGCGAGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS CCA 90 bp GGACCCGAAGACGCTGCAGAGCCGGGGAACGAGGGGCCCAGCGGCTaGTGCTCCGGGTTCCCTGCCCGAGCACATTCCTATTCACAGAGG +
Preference number: 5 (lower is better)
Translates to: GPEDAAEPGNEGPSG*CSGFPARAHSYSQR
Trigger: CCTCTGTGAATAGGAATGTGCTCGGGCAGGGAACCCGGAGCACCAGCCGCTGGGCCCCTCGTTCCCCGGCTCTGCAGCGTCTTCGGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS TCA 90 bp GCTGCAGGAGCTGCTCGCAGTAGGTGGCCGAGCGGTGCTTGTGGATaGCGGCCTCCGTCTCCCTCACCAGGAGATCTGGGAACAGCCCGC +
Preference number: 5 (lower is better)
Translates to: AAGAARSRWPSGACG*RPPSPSPGDLGTAR
Trigger: GCGGGCTGTTCCCAGATCTCCTGGTGAGGGAGACGGAGGCCGTCATCCACAAGCACCGCTCGGCCACCTACTGCGAGCAGCTCCTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS GCA 90 bp GGACCTGCGTACAGCCGGCGCTCACAGCTGCGGTCAGCAGGAAGGTaGTCTGCGCAGACGATGGTCAGTGGCGACTCCCCGCCCACCATT +
Preference number: 5 (lower is better)
Translates to: GPAYSRRSQLRSAGR*SAQTMVSGDSPPTI
Trigger: AATGGTGGGCGGGGAGTCGCCACTGACCATCGTCTGCGCAGAGCACCTTCCTGCTGACCGCAGCTGTGAGCGCCGGCTGTACGCAGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS GCA 90 bp CACAGGCACTTGCCACCATGCACTGGGGCCGGGTACAGCCAGGCCTaGAGGACCCCAAGACACTATAGTCCACGGGCAGCAGGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: HRHLPPCTGAGYSQA*RTPRHYSPRAAGLG
Trigger: GCCCAGCCCTGCTGCCCGTGGACTATAGTGTCTTGGGGTCCTGCAGGCCTGGCTGTACCCGGCCCCAGTGCATGGTGGCAAGTGCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 90 bp CTGGTACAACTTTGGACCACGGCTGCCTCCTCGTCGGTGCAGGCCTaGAACAGGGTCCGGAGGACGACCTCCAGGTGCTGCGTGGCGTGG +
Preference number: 5 (lower is better)
Translates to: LVQLWTTAASSSVQA*NRVRRTTSRCCVAW
Trigger: CCACGCCACGCAGCACCTGGAGGTCGTCCTCCGGACCCTGTTCCAGGCCTGCACCGACGAGGAGGCAGCCGTGGTCCAAAGTTGTACCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000437419.5
ENST00000440747.5
CDS CCA 90 bp TTTCAGATGCCTGGCAGATGTGGGCCTGTGCCAGCTCTGTGGCGATaGCTGCCAGGTGCGGCTGGAGGGCTTCTCGGGGGCAACCCCGCA +
Preference number: 5 (lower is better)
Translates to: FQMPGRCGPVPALWR*LPGAAGGLLGGNPA
Trigger: TGCGGGGTTGCCCCCGAGAAGCCCTCCAGCCGCACCTGGCAGCCATCGCCACAGAGCTGGCACAGGCCCACATCTGCCAGGCATCTGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS CCA 90 bp GCTGCTGGGACGCCTGACTTGAGCCTCCCGCCAGAGCACGAGTCTTaGGCCAAGTGCCGCCCTGCCACGAGAACCACGCTGCTTCTGACC +
Preference number: 5 (lower is better)
Translates to: AAGTPDLSLPPEHES*AKCRPATRTTLLLT
Trigger: GGTCAGAAGCAGCGTGGTTCTCGTGGCAGGGCGGCACTTGGCCCAAGACTCGTGCTCTGGCGGGAGGCTCAAGTCAGGCGTCCCAGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS CCA 90 bp TGTCCAAGGTGGAGACACCATGGCAGACGCAGCCCTCAGCCCTCTTaGGCACCCGCACAGCAGGGACCTGCGTACAGCCGGCGCTCACAG +
Preference number: 5 (lower is better)
Translates to: CPRWRHHGRRSPQPS*APAQQGPAYSRRSQ
Trigger: CTGTGAGCGCCGGCTGTACGCAGGTCCCTGCTGTGCGGGTGCCCAAGAGGGCTGAGGGCTGCGTCTGCCATGGTGTCTCCACCTTGGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 90 bp AGGCCTGCAGGACCCCAAGACACTATAGTCCACGGGCAGCAGGGCTaGGCACAGCCAGACCCACAGGACCCGAAGACGCTGCAGAGCCGG +
Preference number: 5 (lower is better)
Translates to: RPAGPQDTIVHGQQG*AQPDPQDPKTLQSR
Trigger: CCGGCTCTGCAGCGTCTTCGGGTCCTGTGGGTCTGGCTGTGCCCAGCCCTGCTGCCCGTGGACTATAGTGTCTTGGGGTCCTGCAGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS TCA 90 bp AGACGCAATGTACTCGCTGCTCTGGCTCGAAGTCAGGCCTCGCGGTaGGACCAGCTGGTGTCTTGGAGGGCCTCCCCACGCAGCCGGGCA +
Preference number: 5 (lower is better)
Translates to: RRNVLAALARSQASR*DQLVSWRASPRSRA
Trigger: TGCCCGGCTGCGTGGGGAGGCCCTCCAAGACACCAGCTGGTCTCACCGCGAGGCCTGACTTCGAGCCAGAGCAGCGAGTACATTGCGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS GCA 90 bp CTGCGGATCTGGTACAACTTTGGACCACGGCTGCCTCCTCGTCGGTaGAGGCCTGGAACAGGGTCCGGAGGACGACCTCCAGGTGCTGCG +
Preference number: 5 (lower is better)
Translates to: LRIWYNFGPRLPPRR*RPGTGSGGRPPGAA
Trigger: CGCAGCACCTGGAGGTCGTCCTCCGGACCCTGTTCCAGGCCTGCACCGACGAGGAGGCAGCCGTGGTCCAAAGTTGTACCAGATCCGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS GCA 90 bp ACACTGAACTGCAGGAGCTCCGGCGAGTGTGCGGTCCAGTCAAGGTaGGACGCGGTCACCCGCTCCAGGAGGGGACCAATGTGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: TLNCRSSGECAVQSR*DAVTRSRRGPMCLR
Trigger: CCGCAAGCACATTGGTCCCCTCCTGGAGCGGGTGACCGCGTCGCACCTTGACTGGACCGCACACTCGCCGGAGCTCCTGCAGTTCAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS GCA 90 bp GCTTCTCCCAGGGCAGGGCCTGACTGTGCGACGATGACACTGAACTaGAGGAGCTCCGGCGAGTGTGCGGTCCAGTCAAGGTGCGACGCG +
Preference number: 5 (lower is better)
Translates to: ASPRAGPDCATMTLN*RSSGECAVQSRCDA
Trigger: CGCGTCGCACCTTGACTGGACCGCACACTCGCCGGAGCTCCTGCAGTTCAGTGTCATCGTCGCACAGTCAGGCCCTGCCCTGGGAGAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS GCA 90 bp GACCCCCGCACCTGCCCTTGCCACACGGAGACGCAATGTACTCGCTaGTCTGGCTCGAAGTCAGGCCTCGCGGTGAGACCAGCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: DPRTCPCHTETQCTR*SGSKSGLAVRPAGV
Trigger: GACACCAGCTGGTCTCACCGCGAGGCCTGACTTCGAGCCAGAGCAGCGAGTACATTGCGTCTCCGTGTGGCAAGGGCAGGTGCGGGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS GCA 90 bp AGAGCCGGGGAACGAGGGGCCCAGCGGCTGGTGCTCCGGGTTCCCTaGCCGAGCACATTCCTATTCACAGAGGGACTCGAGGTCCACTGT +
Preference number: 5 (lower is better)
Translates to: RAGERGAQRLVLRVP*PSTFLFTEGLEVHC
Trigger: ACAGTGGACCTCGAGTCCCTCTGTGAATAGGAATGTGCTCGGGCAGGGAACCCGGAGCACCAGCCGCTGGGCCCCTCGTTCCCCGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 90 bp CCGTGCGGATGGCCGCGGCTGTCCTCCCCGCATGCCACTGCAGATTaGGGGCCAGGATGTCCTTTGTCACCGTCTCGAGGTAGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: PCGWPRLSSPHATAD*GPGCPLSPSRGSWE
Trigger: TTCCCAGCTACCTCGAGACGGTGACAAAGGACATCCTGGCCCCCAATCTGCAGTGGCATGCGGGGAGGACAGCCGCGGCCATCCGCACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS CCA 90 bp CGGACTTCCCGTTGCCAAAATGGATCACTGCGCCTGTGGCTTCAATaGCGGCCACACGGACCTTCCAGTGCGGGCGTGGCCTGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: RTSRCQNGSLRLWLQ*RPHGPSSAGVACAR
Trigger: CCTGGCGCAGGCCACGCCCGCACTGGAAGGTCCGTGTGGCCGCCATTGAAGCCACAGGCGCAGTGATCCATTTTGGCAACGGGAAGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440747.5
CDS GCA 90 bp AGGATGGAGAACAGCTTCAGGCGCATCTGCGGGTCTTGGGAGGGCTaGAGACAGGCCCTCAGCGTGGGCACGACGTGTGGCAGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: RMENSFRRICGSWEG*RQALSVGTTCGRAS
Trigger: AGAAGCCCTGCCACACGTCGTGCCCACGCTGAGGGCCTGTCTGCAGCCCTCCCAAGACCCGCAGATGCGCCTGAAGCTGTTCTCCATCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
ENST00000491496.1
CDS GCA 90 bp TGCGTACAGCCGGCGCTCACAGCTGCGGTCAGCAGGAAGGTGCTCTaGGCAGACGATGGTCAGTGGCGACTCCCCGCCCACCATTTCTAC +
Preference number: 5 (lower is better)
Translates to: CVQPALTAAVSRKVL*ADDGQWRLPAHHFY
Trigger: GTAGAAATGGTGGGCGGGGAGTCGCCACTGACCATCGTCTGCGCAGAGCACCTTCCTGCTGACCGCAGCTGTGAGCGCCGGCTGTACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 90 bp GCGCCTGTGGCTTCAATGGCGGCCACACGGACCTTCCAGTGCTGGTaGGAGATGGTCTGCATCAGGGGCCCGATCAGAGACTCCGACTGC +
Preference number: 5 (lower is better)
Translates to: APVASMAATRTFQCW*EMVCIRGPIRDSDC
Trigger: GCAGTCGGAGTCTCTGATCGGGCCCCTGATGCAGACCATCTCCCACCAGCACTGGAAGGTCCGTGTGGCCGCCATTGAAGCCACAGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000438961.1
CDS CCA 90 bp CGTCGTCCACGGACTTCCCGTTGCCAAAATGGATCACTGCGCCTGTaGCTTCAATGGCGGCCACACGGACCTTCCAGTGCGGGCGTGGCC +
Preference number: 5 (lower is better)
Translates to: RRPRTSRCQNGSLRL*LQWRPHGPSSAGVA
Trigger: GGCCACGCCCGCACTGGAAGGTCCGTGTGGCCGCCATTGAAGCCACAGGCGCAGTGATCCATTTTGGCAACGGGAAGTCCGTGGACGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440747.5
CDS GCA 90 bp ACGCCTGACTTGAGCCTCCCGCCAGAGCACGAGTCTTGGGCCAAGTaGCGCCCTGCCACGAGAACCACGCTGCTTCTGACCCAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: TPDLSLPPEHESWAK*RPATRTTLLLTQFL
Trigger: CAGAAACTGGGTCAGAAGCAGCGTGGTTCTCGTGGCAGGGCGGCACTTGGCCCAAGACTCGTGCTCTGGCGGGAGGCTCAAGTCAGGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS GCA 90 bp GGCACCTTTTGCTCTGAGCAAAGTAAGTGGCAGGGCCCTAAGAGCTaGCTCAGCAGTGGCACCCGGGCGGGGCCTCTTCCTCCACTGTCC +
Preference number: 5 (lower is better)
Translates to: GTFCSEQSKWQGPKS*LSSGTRAGPLPPLS
Trigger: GGACAGTGGAGGAAGAGGCCCCGCCCGGGTGCCACTGCTGAGGCAGCTCTTAGGGCCCTGCCACTTACTTTGCTCAGAGCAAAAGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 90 bp ACTGCGCCTGTGGCTTCAATGGCGGCCACACGGACCTTCCAGTGCTaGTGGGAGATGGTCTGCATCAGGGGCCCGATCAGAGACTCCGAC +
Preference number: 5 (lower is better)
Translates to: TAPVASMAATRTFQC*WEMVCIRGPIRDSD
Trigger: GTCGGAGTCTCTGATCGGGCCCCTGATGCAGACCATCTCCCACCAGCACTGGAAGGTCCGTGTGGCCGCCATTGAAGCCACAGGCGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000438961.1
CDS CCA 90 bp CCGCACCTGCCCTTGCCACACGGAGACGCAATGTACTCGCTGCTCTaGCTCGAAGTCAGGCCTCGCGGTGAGACCAGCTGGTGTCTTGGA +
Preference number: 5 (lower is better)
Translates to: PHLPLPHGDAMYSLL*LEVRPRGETSWCLG
Trigger: TCCAAGACACCAGCTGGTCTCACCGCGAGGCCTGACTTCGAGCCAGAGCAGCGAGTACATTGCGTCTCCGTGTGGCAAGGGCAGGTGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS CCA 90 bp GGCGCTCACAGCTGCGGTCAGCAGGAAGGTGCTCTGCGCAGACGATaGTCAGTGGCGACTCCCCGCCCACCATTTCTACTTCAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: GAHSCGQQEGALRRR*SVATPRPPFLLQQS
Trigger: GCTCTGCTGAAGTAGAAATGGTGGGCGGGGAGTCGCCACTGACCATCGTCTGCGCAGAGCACCTTCCTGCTGACCGCAGCTGTGAGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS GCA 90 bp ATCACTGCGCCTGTGGCTTCAATGGCGGCCACACGGACCTTCCAGTaGTGGTGGGAGATGGTCTGCATCAGGGGCCCGATCAGAGACTCC +
Preference number: 5 (lower is better)
Translates to: ITAPVASMAATRTFQ*WWEMVCIRGPIRDS
Trigger: GGAGTCTCTGATCGGGCCCCTGATGCAGACCATCTCCCACCAGCACTGGAAGGTCCGTGTGGCCGCCATTGAAGCCACAGGCGCAGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000438961.1
CDS GCA 90 bp TCAATGGCGGCCACACGGACCTTCCAGTGCTGGTGGGAGATGGTCTaGATCAGGGGCCCGATCAGAGACTCCGACTGCATGTGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SMAATRTFQCWWEMV*IRGPIRDSDCMWKW
Trigger: CCACTTCCACATGCAGTCGGAGTCTCTGATCGGGCCCCTGATGCAGACCATCTCCCACCAGCACTGGAAGGTCCGTGTGGCCGCCATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000438961.1
CDS GCA 90 bp CTTGAGCCTCCCGCCAGAGCACGAGTCTTGGGCCAAGTGCCGCCCTaGCACGAGAACCACGCTGCTTCTGACCCAGTTTCTGACTGTTTC +
Preference number: 5 (lower is better)
Translates to: LEPPARARVLGQVPP*HENHAASDPVSDCF
Trigger: GAAACAGTCAGAAACTGGGTCAGAAGCAGCGTGGTTCTCGTGGCAGGGCGGCACTTGGCCCAAGACTCGTGCTCTGGCGGGAGGCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS GCA 90 bp GGAAAGCACGTCGTCCACGGACTTCCCGTTGCCAAAATGGATCACTaGGCCTGTGGCTTCAATGGCGGCCACACGGACCTTCCAGTGCGG +
Preference number: 5 (lower is better)
Translates to: GKHVVHGLPVAKMDH*ACGFNGGHTDLPVR
Trigger: CCGCACTGGAAGGTCCGTGTGGCCGCCATTGAAGCCACAGGCGCAGTGATCCATTTTGGCAACGGGAAGTCCGTGGACGACGTGCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440747.5
CDS GCA 90 bp CCTCCACTGTCCCTCCCAGTGCTCCTAGAGGGCACCCATGCTTCTTaGCCTTACTTCAAAGCCGTACACCTGGAGGCCCTAGACCCTCGG +
Preference number: 5 (lower is better)
Translates to: PPLSLPVLLEGTHAS*PYFKAVHLEALDPR
Trigger: CCGAGGGTCTAGGGCCTCCAGGTGTACGGCTTTGAAGTAAGGGCAAGAAGCATGGGTGCCCTCTAGGAGCACTGGGAGGGACAGTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 90 bp TGGCTTCAATGGCGGCCACACGGACCTTCCAGTGCTGGTGGGAGATaGTCTGCATCAGGGGCCCGATCAGAGACTCCGACTGCATGTGGA +
Preference number: 5 (lower is better)
Translates to: WLQWRPHGPSSAGGR*SASGARSETPTACG
Trigger: TCCACATGCAGTCGGAGTCTCTGATCGGGCCCCTGATGCAGACCATCTCCCACCAGCACTGGAAGGTCCGTGTGGCCGCCATTGAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000438961.1
CDS CCA 90 bp CGTCGTCCACGGACTTCCCGTTGCCAAAATGGATCACTGCGCCTGTaGCTTCAATGGCGGCCACACGGACCTTCCAGTGCTGGTGGGAGA +
Preference number: 5 (lower is better)
Translates to: RRPRTSRCQNGSLRL*LQWRPHGPSSAGGR
Trigger: TCTCCCACCAGCACTGGAAGGTCCGTGTGGCCGCCATTGAAGCCACAGGCGCAGTGATCCATTTTGGCAACGGGAAGTCCGTGGACGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000438961.1
CDS CCA 90 bp TGGGAGGCAGCCCTGAGAACCTCTCATGATTCATGGTGTCCAAGGTaGAGACACCATGGCAGACGCAGCCCTCAGCCCTCTTGGGCACCC +
Preference number: 5 (lower is better)
Translates to: WEAALRTSHDSWCPR*RHHGRRSPQPSWAP
Trigger: GGGTGCCCAAGAGGGCTGAGGGCTGCGTCTGCCATGGTGTCTCCACCTTGGACACCATGAATCATGAGAGGTTCTCAGGGCTGCCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS-3UTR CAA 90 bp CACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTGAAACCAGCGTGAACTGCCCCTGGGAGTaGATGGTGTCCGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: HKLWLRWGQGCAVAETSVNCPWE*MVSVAL
Trigger: CAGAGCCACGGACACCATCAACTCCCAGGGGCAGTT...CACGCTGGTTTCAGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS GCA 90 bp GGAAAGCACGTCGTCCACGGACTTCCCGTTGCCAAAATGGATCACTaGGCCTGTGGCTTCAATGGCGGCCACACGGACCTTCCAGTGCTG +
Preference number: 5 (lower is better)
Translates to: GKHVVHGLPVAKMDH*ACGFNGGHTDLPVL
Trigger: CAGCACTGGAAGGTCCGTGTGGCCGCCATTGAAGCCACAGGCGCAGTGATCCATTTTGGCAACGGGAAGTCCGTGGACGACGTGCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000438961.1
CDS GCA 90 bp GAGGATGGACTAGCTGCTTCCAGGCCAGTTAAGCTCAGGGGTCACTaGACACGCCCACCTCAGACTTGGTGTGGGGAACCCTCACCCAGA +
Preference number: 5 (lower is better)
Translates to: EDGLAASRPVKLRGH*TRPPQTWCGEPSPR
Trigger: TCTGGGTGAGGGTTCCCCACACCAAGTCTGAGGTGGGCGTGTGCAGTGACCCCTGAGCTTAACTGGCCTGGAAGCAGCTAGTCCATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS GCA 90 bp GCTAGCAAACATCTATGGGCCCGGACAGGATCCTCCGAGGCCTCCTaGTGGCGCGGTCGACTATGGAAGTACACAGAGTGGCACTGGCTA +
Preference number: 5 (lower is better)
Translates to: ASKHLWARTGSSEAS*WRGRLWKYTEWHWL
Trigger: TAGCCAGTGCCACTCTGTGTACTTCCATAGTCGACCGCGCCAGCAGGAGGCCTCGGAGGATCCTGTCCGGGCCCATAGATGTTTGCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS CCA 90 bp CGGACTTCCCGTTGCCAAAATGGATCACTGCGCCTGTGGCTTCAATaGCGGCCACACGGACCTTCCAGTGCTGGTGGGAGATGGTCTGCA +
Preference number: 5 (lower is better)
Translates to: RTSRCQNGSLRLWLQ*RPHGPSSAGGRWSA
Trigger: TGCAGACCATCTCCCACCAGCACTGGAAGGTCCGTGTGGCCGCCATTGAAGCCACAGGCGCAGTGATCCATTTTGGCAACGGGAAGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000438961.1
CDS CCA 90 bp ACAGCTGCGGTCAGCAGGAAGGTGCTCTGCGCAGACGATGGTCAGTaGCGACTCCCCGCCCACCATTTCTACTTCAGCAGAGCCAACTTG +
Preference number: 5 (lower is better)
Translates to: TAAVSRKVLCADDGQ*RLPAHHFYFSRANL
Trigger: CAAGTTGGCTCTGCTGAAGTAGAAATGGTGGGCGGGGAGTCGCCACTGACCATCGTCTGCGCAGAGCACCTTCCTGCTGACCGCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS-3UTR CAA 90 bp CACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAGCTGCGCACGTGAGGCTTTCCCAGGGCAGGGCCTaGAGCCGTTGCTGGGGACCT +
Preference number: 5 (lower is better)
Translates to: HLSRMQPIVHEPAAHVRLSQGRA*SRCWGP
Trigger: AGGTCCCCAGCAACGGCTCAAGGCCCTGCCCTGGGA...AAGCCTCACGTGCGCAGCTGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS CCA 90 bp ACAGAAAGCCTGTGGGAGGCAGCCCTGAGAACCTCTCATGATTCATaGTGTCCAAGGTGGAGACACCATGGCAGACGCAGCCCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: TESLWEAALRTSHDS*CPRWRHHGRRSPQP
Trigger: GGGCTGAGGGCTGCGTCTGCCATGGTGTCTCCACCTTGGACACCATGAATCATGAGAGGTTCTCAGGGCTGCCTCCCACAGGCTTTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 90 bp CTGCCCGAGCACATTCCTATTCACAGAGGGACTCGAGGTCCACTGTaGGGCTTGACTTCCAGAAACGGTGCAGCCTCAAAGCCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: LPEHIPIHRGTRGPL*GLTSRNGAASKPGA
Trigger: GGCTCCTGGCTTTGAGGCTGCACCGTTTCTGGAAGTCAAGCCCCACAGTGGACCTCGAGTCCCTCTGTGAATAGGAATGTGCTCGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 90 bp AGCAAACATCTATGGGCCCGGACAGGATCCTCCGAGGCCTCCTGCTaGCGCGGTCGACTATGGAAGTACACAGAGTGGCACTGGCTATTG +
Preference number: 5 (lower is better)
Translates to: SKHLWARTGSSEASC*RGRLWKYTEWHWLL
Trigger: CAATAGCCAGTGCCACTCTGTGTACTTCCATAGTCGACCGCGCCAGCAGGAGGCCTCGGAGGATCCTGTCCGGGCCCATAGATGTTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS-3UTR CAA 90 bp CACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCAGGTGGCCCAGCGCCGCCATCTaGCCCGCGTCGCCGGTCACT +
Preference number: 5 (lower is better)
Translates to: HRGALFMRFKGHKLWLRWPSAAI*PASPVT
Trigger: AGTGACCGGCGACGCGGGCAAGATGGCGGCGCTGGG...CCACCTGAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR CAA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGCCCCCGCACCTGCCCTaGCCACACGGAGACGCAATG +
Preference number: 5 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLPPHLP*PHGDAM
Trigger: CATTGCGTCTCCGTGTGGCAAGGGCAGGTGCGGGGG...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS GCA 90 bp GTCGCTGAGCAAAATGGGAAAGCACGTCGTCCACGGACTTCCCGTTaGCAAAATGGATCACTGCGCCTGTGGCTTCAATGGCGGCCACAC +
Preference number: 5 (lower is better)
Translates to: VAEQNGKARRPRTSR*QNGSLRLWLQWRPH
Trigger: GTGTGGCCGCCATTGAAGCCACAGGCGCAGTGATCCATTTTGGCAACGGGAAGTCCGTGGACGACGTGCTTTCCCATTTTGCTCAGCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000438961.1
ENST00000440747.5
CDS CCA 90 bp GCAAAATGGGAAAGCACGTCGTCCACGGACTTCCCGTTGCCAAAATaGATCACTGCGCCTGTGGCTTCAATGGCGGCCACACGGACCTTC +
Preference number: 5 (lower is better)
Translates to: AKWESTSSTDFPLPK*ITAPVASMAATRTF
Trigger: GAAGGTCCGTGTGGCCGCCATTGAAGCCACAGGCGCAGTGATCCATTTTGGCAACGGGAAGTCCGTGGACGACGTGCTTTCCCATTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000438961.1
ENST00000440747.5
CDS CCA 90 bp GCCCGGACAGGATCCTCCGAGGCCTCCTGCTGGCGCGGTCGACTATaGAAGTACACAGAGTGGCACTGGCTATTGTGTTTTTACGATGGT +
Preference number: 5 (lower is better)
Translates to: ARTGSSEASCWRGRL*KYTEWHWLLCFYDG
Trigger: ACCATCGTAAAAACACAATAGCCAGTGCCACTCTGTGTACTTCCATAGTCGACCGCGCCAGCAGGAGGCCTCGGAGGATCCTGTCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS TCA 90 bp GTAAGACACAGAAAGCCTGTGGGAGGCAGCCCTGAGAACCTCTCATaGTTCATGGTGTCCAAGGTGGAGACACCATGGCAGACGCAGCCC +
Preference number: 5 (lower is better)
Translates to: VRHRKPVGGSPENLS*FMVSKVETPWQTQP
Trigger: GGGCTGCGTCTGCCATGGTGTCTCCACCTTGGACACCATGAATCATGAGAGGTTCTCAGGGCTGCCTCCCACAGGCTTTCTGTGTCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS TCA 90 bp AGCACATTCCTATTCACAGAGGGACTCGAGGTCCACTGTGGGGCTTaGCTTCCAGAAACGGTGCAGCCTCAAAGCCAGGAGCCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: STFLFTEGLEVHCGA*LPETVQPQSQEPLA
Trigger: GGCAAGAGGCTCCTGGCTTTGAGGCTGCACCGTTTCTGGAAGTCAAGCCCCACAGTGGACCTCGAGTCCCTCTGTGAATAGGAATGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 90 bp TACGGCATGAGATCAGTCGCGTCATCTTCGAATCCTCCTCCAGGGTaGTCAGGACCTGGGGCATCAGTGTTTCCTGCACGTCCCGTATCT +
Preference number: 5 (lower is better)
Translates to: YGMRSVASSSNPPPG*SGPGASVFPARPVS
Trigger: AGATACGGGACGTGCAGGAAACACTGATGCCCCAGGTCCTGACCACCCTGGAGGAGGATTCGAAGATGACGCGACTGATCTCATGCCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS CCA 90 bp GGCCTGTCTGCTGTTCATGTTTGTGTCTGTCTGTCCTGGGAGGCCTaGATGTCTGTGCTCCCAACTCAGGACATCCTTCCTTCCCCACCA +
Preference number: 5 (lower is better)
Translates to: GLSAVHVCVCLSWEA*MSVLPTQDILPSPP
Trigger: TGGTGGGGAAGGAAGGATGTCCTGAGTTGGGAGCACAGACATCCAGGCCTCCCAGGACAGACAGACACAAACATGAACAGCAGACAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS CCA 90 bp GCTCACGCTGGCCTGTCTGCTGTTCATGTTTGTGTCTGTCTGTCCTaGGAGGCCTGGATGTCTGTGCTCCCAACTCAGGACATCCTTCCT +
Preference number: 5 (lower is better)
Translates to: AHAGLSAVHVCVCLS*EAWMSVLPTQDILP
Trigger: AGGAAGGATGTCCTGAGTTGGGAGCACAGACATCCAGGCCTCCCAGGACAGACAGACACAAACATGAACAGCAGACAGGCCAGCGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS CCA 90 bp GGGTTCCTTTCATGCACGACTAAGCCAGGCAGAATCGGCTCACGCTaGCCTGTCTGCTGTTCATGTTTGTGTCTGTCTGTCCTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: GFLSCTTKPGRIGSR*PVCCSCLCLSVLGG
Trigger: GCCTCCCAGGACAGACAGACACAAACATGAACAGCAGACAGGCCAGCGTGAGCCGATTCTGCCTGGCTTAGTCGTGCATGAAAGGAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS CCA 90 bp GCCTCCTGCTGGCGCGGTCGACTATGGAAGTACACAGAGTGGCACTaGCTATTGTGTTTTTACGATGGTCACTCCCTGGATGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: ASCWRGRLWKYTEWH*LLCFYDGHSLDGLQ
Trigger: CTGCAGGCCATCCAGGGAGTGACCATCGTAAAAACACAATAGCCAGTGCCACTCTGTGTACTTCCATAGTCGACCGCGCCAGCAGGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS CCA 90 bp TCCGAGGCCTCCTGCTGGCGCGGTCGACTATGGAAGTACACAGAGTaGCACTGGCTATTGTGTTTTTACGATGGTCACTCCCTGGATGGC +
Preference number: 5 (lower is better)
Translates to: SEASCWRGRLWKYTE*HWLLCFYDGHSLDG
Trigger: GCCATCCAGGGAGTGACCATCGTAAAAACACAATAGCCAGTGCCACTCTGTGTACTTCCATAGTCGACCGCGCCAGCAGGAGGCCTCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS-3UTR CAA 90 bp AGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTGGGGCAAAGTCCAGCTaGTCCTTCAGGTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: RFKGHKLWLRWGQGCAVAGAKSS*SFRSSS
Trigger: TGAGGAGGACCTGAAGGACAAGCTGGACTTTGCCCC...AGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CAA 90 bp AGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTCTGCGAGGGCCACTATaGTCAGCAGCACGTCCAAGA +
Preference number: 5 (lower is better)
Translates to: RFKGHKLWLRWGQGCAVALRGPL*SAARPR
Trigger: TCTTGGACGTGCTGCTGACAATAGTGGCCCTCGCAG...AGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CAA 90 bp CACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGGCGCATCTGCGGGTCTaGGGAGGGCTGCAGACAGGC +
Preference number: 5 (lower is better)
Translates to: HCWHRGALFMRFKGHKLWAHLRV*GGLQTG
Trigger: GCCTGTCTGCAGCCCTCCCAAGACCCGCAGATGCGC...CCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp CACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAGCTGCGCACGTGAGGCTTAACTGCCCCTGGGAGTaGATGGTGTCCGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: HLSRMQPIVHEPAAHVRLNCPWE*MVSVAL
Trigger: CAGAGCCACGGACACCATCAACTCCCAGGGGCAGTT...AAGCCTCACGTGCGCAGCTGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp TCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACGTGGCCGAGCGGTGCTaGTGGATGACGGCCTCCGTC +
Preference number: 5 (lower is better)
Translates to: SQSHCWHRGALFMRFKGHVAERC*WMTASV
Trigger: GACGGAGGCCGTCATCCACAAGCACCGCTCGGCCAC...GTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp CACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGTGGCCGAGCGGTGCTaGTGGATGACGGCCTCCGTC +
Preference number: 5 (lower is better)
Translates to: HRGALFMRFKGHKLWLRWVAERC*WMTASV
Trigger: GACGGAGGCCGTCATCCACAAGCACCGCTCGGCCAC...CCACCTGAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp CACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGCTGGGACGCCTGACTaGAGCCTCCCGCCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: HRGALFMRFKGHKLWLRWAGTPD*SLPPEH
Trigger: GTGCTCTGGCGGGAGGCTCAAGTCAGGCGTCCCAGC...CCACCTGAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS TCA 90 bp CCGAGTGTCCCAGGTAAGACACAGAAAGCCTGTGGGAGGCAGCCCTaGGAACCTCTCATGATTCATGGTGTCCAAGGTGGAGACACCATG +
Preference number: 5 (lower is better)
Translates to: PSVPGKTQKACGRQP*EPLMIHGVQGGDTM
Trigger: CATGGTGTCTCCACCTTGGACACCATGAATCATGAGAGGTTCTCAGGGCTGCCTCCCACAGGCTTTCTGTGTCTTACCTGGGACACTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS GCA 90 bp CTGTTCATGTTTGTGTCTGTCTGTCCTGGGAGGCCTGGATGTCTGTaGTCCCAACTCAGGACATCCTTCCTTCCCCACCAAGGAGGCCAT +
Preference number: 5 (lower is better)
Translates to: LFMFVSVCPGRPGCL*SQLRTSFLPHQGGH
Trigger: ATGGCCTCCTTGGTGGGGAAGGAAGGATGTCCTGAGTTGGGAGCACAGACATCCAGGCCTCCCAGGACAGACAGACACAAACATGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS GCA 90 bp GATGGCCTGCAGGTCCACTTTTGTACCAGTTTAGGGTTCCTTTCATaGACGACTAAGCCAGGCAGAATCGGCTCACGCTGGCCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: DGLQVHFCTSLGFLS*TTKPGRIGSRWPVC
Trigger: GCAGACAGGCCAGCGTGAGCCGATTCTGCCTGGCTTAGTCGTGCATGAAAGGAACCCTAAACTGGTACAAAAGTGGACCTGCAGGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS-3UTR CAA 90 bp CACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAGCTGCGCACGTGAGGCTTGGATCTGGTACAACTTaGGACCACGGCTGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: HLSRMQPIVHEPAAHVRLGSGTT*DHGCLL
Trigger: GAGGAGGCAGCCGTGGTCCAAAGTTGTACCAGATCC...AAGCCTCACGTGCGCAGCTGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CAA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGATCGTCTCCTGTGCCTaGTCCCTCAGGCCGGTAGCA +
Preference number: 5 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLIVSCA*SLRPVA
Trigger: TGCTACCGGCCTGAGGGACAAGGCACAGGAGACGAT...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CAA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGAACTGCCCCTGGGAGTaGATGGTGTCCGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLNCPWE*MVSVAL
Trigger: CAGAGCCACGGACACCATCAACTCCCAGGGGCAGTT...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp CAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAAGTGGCCGAGCGGTGCTaGTGGATGACGGCCTCCGTC +
Preference number: 5 (lower is better)
Translates to: QSHCWHRGALFMRFKGHKVAERC*WMTASV
Trigger: GACGGAGGCCGTCATCCACAAGCACCGCTCGGCCAC...TTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp GTAGGTAAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATGCCAGAGCACGAGTCTaGGGCCAAGTGCCGCCCTGC +
Preference number: 5 (lower is better)
Translates to: VGKNLLGGHLSRMQPIVHARARV*GQVPPC
Trigger: GCAGGGCGGCACTTGGCCCAAGACTCGTGCTCTGGC...ATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTTACCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS TCA 90 bp GTCAAGTCCAACTCCTGGGATGGGAAAAAGAAGCACGCTGACGGGTaGGCCACTTGCTGTCAAGAATGTTCAAACCTGACGCCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: VKSNSWDGKKKHADG*ATCCQECSNLTPGP
Trigger: TGGCCCAGGCGTCAGGTTTGAACATTCTTGACAGCAAGTGGCTCACCCGTCAGCGTGCTTCTTTTTCCCATCCCAGGAGTTGGACTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS GCA 90 bp GTTAGGCGCACTTTCTTTGGGAACTCAGCCCAGATGTGGAAACTGTaGTCTGCAGAGTTAACTGTTCCTGGGCAGAACCTGCCCAGCGGT +
Preference number: 5 (lower is better)
Translates to: VRRTFFGNSAQMWKL*SAELTVPGQNLPSG
Trigger: ACCGCTGGGCAGGTTCTGCCCAGGAACAGTTAACTCTGCAGAGCACAGTTTCCACATCTGGGCTGAGTTCCCAAAGAAAGTGCGCCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 90 bp GGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGCTCAGGTaGGGACAAGGGTGTGCCGTGGCTGAAACCAGCGTGGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: GALFMRFKGHKLWLR*GQGCAVAETSVVTV
Trigger: CACAGTGACCACGCTGGTTTCAGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp CACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAGCTGCGCACGTGAGGCTTTCCACGGACTTCCCGTaGCCAAAATGGATCACTGCG +
Preference number: 5 (lower is better)
Translates to: HLSRMQPIVHEPAAHVRLSTDFP*PKWITA
Trigger: CGCAGTGATCCATTTTGGCAACGGGAAGTCCGTGGA...AAGCCTCACGTGCGCAGCTGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CAA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGTCAGGCACCTCGTCGTaGAGGCTACTGAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLSGTSS*RLLSSR
Trigger: TCTGCTGCTCAGTAGCCTCAACGACGAGGTGCCTGA...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CAA 90 bp GAGGAGTACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTGGGGCAAAGTCCAGCTaGTCCTTCAGGTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: EEYILAVTVSLLAQRCLVGAKSS*SFRSSS
Trigger: TGAGGAGGACCTGAAGGACAAGCTGGACTTTGCCCC...AACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGTACTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CAA 90 bp AGAATCCACTCAGAGGCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGGCCATCCTCACATCGTaGGACACGTCATCTAGGCGT +
Preference number: 5 (lower is better)
Translates to: RIHSEAVIPGKEWAGVLRAILTS*DTSSRR
Trigger: ACGCCTAGATGACGTGTCCAACGATGTGAGGATGGC...CCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGCCTCTGAGTGGATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGTTTGCGTTGGCACCCTaGACACACTGCAGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLFALAP*THCSQV
Trigger: CACCTGGCTGCAGTGTGTCAAGGGTGCCAACGCAAA...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp GGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGACAGGGCCTTGAGCCGTaGCTGGGGACCTCGCGATGT +
Preference number: 5 (lower is better)
Translates to: GSPLDEQNKSHNMQNPLRQGLEP*LGTSRC
Trigger: ACATCGCGAGGTCCCCAGCAACGGCTCAAGGCCCTG...TCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS TCA 90 bp TCCACAGGTCAAGTCCAACTCCTGGGATGGGAAAAAGAAGCACGCTaGCGGGTGAGCCACTTGCTGTCAAGAATGTTCAAACCTGACGCC +
Preference number: 5 (lower is better)
Translates to: STGQVQLLGWEKEAR*RVSHLLSRMFKPDA
Trigger: GGCGTCAGGTTTGAACATTCTTGACAGCAAGTGGCTCACCCGTCAGCGTGCTTCTTTTTCCCATCCCAGGAGTTGGACTTGACCTGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS GCA 90 bp CAACTCTCGGTACAGGTACTGGACACTGCTCTGATAGTAGGATTTTaGGTTGGCACCCTTGACACACTGCAGCCAGGTGACCAAGGTGGA +
Preference number: 5 (lower is better)
Translates to: QLSVQVLDTALIVGF*VGTLDTLQPGDQGG
Trigger: TCCACCTTGGTCACCTGGCTGCAGTGTGTCAAGGGTGCCAACGCAAAATCCTACTATCAGAGCAGTGTCCAGTACCTGTACCGAGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
ENST00000461576.1
CDS-3UTR CAA 90 bp AGATGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCGCGCATCTGCGGGTCTaGGGAGGGCTGCAGACAGGC +
Preference number: 5 (lower is better)
Translates to: RCLGALSMNRTNHITCRIAHLRV*GGLQTG
Trigger: GCCTGTCTGCAGCCCTCCCAAGACCCGCAGATGCGC...GATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp CACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGGGGCCAGGATGTCCTTaGTCACCGTCTCGAGGTAGC +
Preference number: 5 (lower is better)
Translates to: HCWHRGALFMRFKGHKLWGPGCP*SPSRGS
Trigger: GCTACCTCGAGACGGTGACAAAGGACATCCTGGCCC...CCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp TATATACGGCATTTCCCCCGTGTGAACACAATGGCTTCCGGTAACACTACCCACTTTGCGTTGGCACCCTaGACACACTGCAGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: YIRHFPRVNTMASGNTTHFALAP*THCSQV
Trigger: CACCTGGCTGCAGTGTGTCAAGGGTGCCAACGCAAA...GTGGGTAGTGTTACCGGAAGCCATTGTGTTCACACGGGGGAAATGCCGTATATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR CAA 90 bp GATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTCCGCCGGGCAGGAGGCGTaGCACCGAAGCTGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: DEQNKSHNMQNPLRGCYSAGQEA*HRSCWD
Trigger: GTCCCAGCAGCTTCGGTGCAACGCCTCCTGCCCGGC...GGAATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS-3UTR CAA 90 bp TCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACCTGCGAGGGCCACTATaGTCAGCAGCACGTCCAAGA +
Preference number: 5 (lower is better)
Translates to: SQSHCWHRGALFMRFKGHLRGPL*SAARPR
Trigger: TCTTGGACGTGCTGCTGACAATAGTGGCCCTCGCAG...GTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CAA 90 bp CAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAAATCGTCTCCTGTGCCTaGTCCCTCAGGCCGGTAGCA +
Preference number: 5 (lower is better)
Translates to: QSHCWHRGALFMRFKGHKIVSCA*SLRPVA
Trigger: TGCTACCGGCCTGAGGGACAAGGCACAGGAGACGAT...TTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CAA 90 bp CACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAACTCTGGTTTGCGTTGGCACCCTaGACACACTGCAGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: HCWHRGALFMRFKGHKLWFALAP*THCSQV
Trigger: CACCTGGCTGCAGTGTGTCAAGGGTGCCAACGCAAA...CCAGAGTTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS TCA 90 bp TCTTCTTCAGCGTCGATAAGATCAGCTTCAGAAACACCTCAGGGCTaGCAAACGTCCCGACGAGCTCTGCGGATCTGGTACAACTTTGGA +
Preference number: 5 (lower is better)
Translates to: SSSASIRSASETPQG*QTSRRALRIWYNFG
Trigger: TCCAAAGTTGTACCAGATCCGCAGAGCTCGTCGGGACGTTTGTCAGCCCTGAGGTGTTTCTGAAGCTGATCTTATCGACGCTGAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS GCA 90 bp CAAAATACAGCCGAGTGTGAGTTCCAGAGGGAAGGGCCTGGACCCTaGTGTGTTATCTGCATGGCATCTACACAAATATCAGCCTGCAAG +
Preference number: 5 (lower is better)
Translates to: QNTAECEFQREGPGP*CVICMASTQISACK
Trigger: CTTGCAGGCTGATATTTGTGTAGATGCCATGCAGATAACACAGCAGGGTCCAGGCCCTTCCCTCTGGAACTCACACTCGGCTGTATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 90 bp CAAGACGTTGTTAGGCGCACTTTCTTTGGGAACTCAGCCCAGATGTaGAAACTGTGCTCTGCAGAGTTAACTGTTCCTGGGCAGAACCTG +
Preference number: 5 (lower is better)
Translates to: QDVVRRTFFGNSAQM*KLCSAELTVPGQNL
Trigger: CAGGTTCTGCCCAGGAACAGTTAACTCTGCAGAGCACAGTTTCCACATCTGGGCTGAGTTCCCAAAGAAAGTGCGCCTAACAACGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS-3UTR CAA 90 bp ACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATCCACGGACTTCCCGTaGCCAAAATGGATCACTGCG +
Preference number: 5 (lower is better)
Translates to: TFLLSQSHCWHRGALFMRSTDFP*PKWITA
Trigger: CGCAGTGATCCATTTTGGCAACGGGAAGTCCGTGGA...TCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CAA 90 bp GGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGATCAGGCACCTCGTCGTaGAGGCTACTGAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: GSPLDEQNKSHNMQNPLRSGTSS*RLLSSR
Trigger: TCTGCTGCTCAGTAGCCTCAACGACGAGGTGCCTGA...TCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CAA 90 bp AAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAGGATCTGGTACAACTTaGGACCACGGCTGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: KNLLGGHLSRMQPIVHEPGSGTT*DHGCLL
Trigger: GAGGAGGCAGCCGTGGTCCAAAGTTGTACCAGATCC...TGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS-3UTR CAA 90 bp TCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGGCTGTTATTGCGCATCTGCGGGTCTaGGGAGGGCTGCAGACAGGC +
Preference number: 5 (lower is better)
Translates to: SMNRTNHITCRIHSEAVIAHLRV*GGLQTG
Trigger: GCCTGTCTGCAGCCCTCCCAAGACCCGCAGATGCGC...AATAACAGCCTCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp GCTGTTATTCCAGGGAAAGAGTGGGCAGGTGTCCTGAGGAGTACATTCTTGCTGCTGAGGAGTACATTCTaGCTGTCACAGTCTCACTGC +
Preference number: 5 (lower is better)
Translates to: AVIPGKEWAGVLRSTFLLLRSTF*LSQSHC
Trigger: GCAGTGAGACTGTGACAGCAAGAATGTACTCCTCAG...CAGCAAGAATGTACTCCTCAGGACACCTGCCCACTCTTTCCCTGGAATAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp ATACGGCATTTCCCCCGTGTGAACACAATGGCTTCCGGTAACACTACCCACTTAATCAGCTGCAGATGTTaGGGAGCCCTCTCGATGAAC +
Preference number: 5 (lower is better)
Translates to: IRHFPRVNTMASGNTTHLISCRC*GALSMN
Trigger: GTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGAT...TAAGTGGGTAGTGTTACCGGAAGCCATTGTGTTCACACGGGGGAAATGCCGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS GCA 90 bp GGACCCTGCTGTGTTATCTGCATGGCATCTACACAAATATCAGCCTaGAAGCTGGACAGCTGCCACGGCTCTCGGTTCATATCTTTCTAT +
Preference number: 5 (lower is better)
Translates to: GPCCVICMASTQISA*KLDSCHGSRFISFY
Trigger: ATAGAAAGATATGAACCGAGAGCCGTGGCAGCTGTCCAGCTTGCAGGCTGATATTTGTGTAGATGCCATGCAGATAACACAGCAGGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 90 bp CTGCAAGCTGGACAGCTGCCACGGCTCTCGGTTCATATCTTTCTATaGTCCGTTCTAAGCCCTGAAGTCTTTGAAGACAAGCAGGAAACA +
Preference number: 5 (lower is better)
Translates to: LQAGQLPRLSVHIFL*SVLSPEVFEDKQET
Trigger: TGTTTCCTGCTTGTCTTCAAAGACTTCAGGGCTTAGAACGGACCATAGAAAGATATGAACCGAGAGCCGTGGCAGCTGTCCAGCTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 90 bp GCTGTGTTATCTGCATGGCATCTACACAAATATCAGCCTGCAAGCTaGACAGCTGCCACGGCTCTCGGTTCATATCTTTCTATGGTCCGT +
Preference number: 5 (lower is better)
Translates to: AVLSAWHLHKYQPAS*TAATALGSYLSMVR
Trigger: ACGGACCATAGAAAGATATGAACCGAGAGCCGTGGCAGCTGTCCAGCTTGCAGGCTGATATTTGTGTAGATGCCATGCAGATAACACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS-3UTR CAA 90 bp AGATGTTTGGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCGGGCCAGGATGTCCTTaGTCACCGTCTCGAGGTAGC +
Preference number: 5 (lower is better)
Translates to: RCLGALSMNRTNHITCRIGPGCP*SPSRGS
Trigger: GCTACCTCGAGACGGTGACAAAGGACATCCTGGCCC...GATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp GGGAGCCCTCTCGATGAACAGAACAAATCACATAACATGCAGAATCCACTCAGAGCCATCCTCACATCGTaGGACACGTCATCTAGGCGT +
Preference number: 5 (lower is better)
Translates to: GSPLDEQNKSHNMQNPLRAILTS*DTSSRR
Trigger: ACGCCTAGATGACGTGTCCAACGATGTGAGGATGGC...TCTGAGTGGATTCTGCATGTTATGTGATTTGTTCTGTTCATCGAGAGGGCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp GTAGGTAAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATGCCATCCTCACATCGTaGGACACGTCATCTAGGCGT +
Preference number: 5 (lower is better)
Translates to: VGKNLLGGHLSRMQPIVHAILTS*DTSSRR
Trigger: ACGCCTAGATGACGTGTCCAACGATGTGAGGATGGC...ATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTTACCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp ACATTCTTGCTGTCACAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGAATCAGCTGCAGATGTTaGGGAGCCCTCTCGATGAAC +
Preference number: 5 (lower is better)
Translates to: TFLLSQSHCWHRGALFMRISCRC*GALSMN
Trigger: GTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGAT...TCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTGTGACAGCAAGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS CCA 90 bp AGAGTGGCACTGGCTATTGTGTTTTTACGATGGTCACTCCCTGGATaGCCTGCAGGTCCACTTTTGTACCAGTTTAGGGTTCCTTTCATG +
Preference number: 5 (lower is better)
Translates to: RVALAIVFLRWSLPG*PAGPLLYQFRVPFM
Trigger: CATGAAAGGAACCCTAAACTGGTACAAAAGTGGACCTGCAGGCCATCCAGGGAGTGACCATCGTAAAAACACAATAGCCAGTGCCACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS-3UTR CAA 90 bp TTAATTTCAAATCAGCTGCAGATGTTTGGGAGCCCTCTCGATGAACAGAACAAAGGGCCAGGATGTCCTTaGTCACCGTCTCGAGGTAGC +
Preference number: 5 (lower is better)
Translates to: LISNQLQMFGSPLDEQNKGPGCP*SPSRGS
Trigger: GCTACCTCGAGACGGTGACAAAGGACATCCTGGCCC...TTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGATTTGAAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp AAAAACCTTCTTGGTGGGCACCTAAGCAGGATGCAGCCAATAGTTCATGAACCAATCAGCTGCAGATGTTaGGGAGCCCTCTCGATGAAC +
Preference number: 5 (lower is better)
Translates to: KNLLGGHLSRMQPIVHEPISCRC*GALSMN
Trigger: GTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGAT...TGGTTCATGAACTATTGGCTGCATCCTGCTTAGGTGCCCACCAAGAAGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS CCA 90 bp ACTATGGAAGTACACAGAGTGGCACTGGCTATTGTGTTTTTACGATaGTCACTCCCTGGATGGCCTGCAGGTCCACTTTTGTACCAGTTT +
Preference number: 5 (lower is better)
Translates to: TMEVHRVALAIVFLR*SLPGWPAGPLLYQF
Trigger: AAACTGGTACAAAAGTGGACCTGCAGGCCATCCAGGGAGTGACCATCGTAAAAACACAATAGCCAGTGCCACTCTGTGTACTTCCATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS-3UTR CAA 90 bp AGATTTAAAGGCCACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTGTTTTTAAGAACGTGTaGATAATACGGCATGAGATC +
Preference number: 5 (lower is better)
Translates to: RFKGHKLWLRWGQGCAVAVFKNV*IIRHEI
Trigger: GATCTCATGCCGTATTATCAACACGTTCTTAAAAAC...AGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGTGGCCTTTAAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp TATATACGGCATTTCCCCCGTGTGAACACAATGGCTTCCGGTAACACTACCCACAGATCTTTTAGGCACTaGGGTGTAGAATGTGCGAGA +
Preference number: 5 (lower is better)
Translates to: YIRHFPRVNTMASGNTTHRSFRH*GVECAR
Trigger: TCTCGCACATTCTACACCCAAGTGCCTAAAAGATCT...GTGGGTAGTGTTACCGGAAGCCATTGTGTTCACACGGGGGAAATGCCGTATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR CAA 90 bp TATATACGGCATTTCCCCCGTGTGAACACAATGGCTTCCGGTAACACTACCCACGTTTTTAAGAACGTGTaGATAATACGGCATGAGATC +
Preference number: 5 (lower is better)
Translates to: YIRHFPRVNTMASGNTTHVFKNV*IIRHEI
Trigger: GATCTCATGCCGTATTATCAACACGTTCTTAAAAAC...GTGGGTAGTGTTACCGGAAGCCATTGTGTTCACACGGGGGAAATGCCGTATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS-3UTR CAA 90 bp TTAATTTCAAATCAGCTGCAGATGTTTGGGAGCCCTCTCGATGAACAGAACAAACTGAGGAGTACATTCTaGCTGTCACAGTCTCACTGC +
Preference number: 5 (lower is better)
Translates to: LISNQLQMFGSPLDEQNKLRSTF*LSQSHC
Trigger: GCAGTGAGACTGTGACAGCAAGAATGTACTCCTCAG...TTTGTTCTGTTCATCGAGAGGGCTCCCAAACATCTGCAGCTGATTTGAAATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS-3UTR CAA 90 bp CAGTCTCACTGCTGGCACAGAGGTGCCTTGTTTATGAGATTTAAAGGCCACAAAGTTTTTAAGAACGTGTaGATAATACGGCATGAGATC +
Preference number: 5 (lower is better)
Translates to: QSHCWHRGALFMRFKGHKVFKNV*IIRHEI
Trigger: GATCTCATGCCGTATTATCAACACGTTCTTAAAAAC...TTTGTGGCCTTTAAATCTCATAAACAAGGCACCTCTGTGCCAGCAGTGAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS GCA 72 bp CGCGGCGCGGCGCAGGCCCAGATCCAGCAGGTGCACTaGCAGCGCGCGGCAGCCCTCGGCGGGGTCGCTCAG +
Preference number: 6 (lower is better)
Translates to: RGAAQAQIQQVH*QRAAALGGVAQ
Trigger: CTGAGCGACCCCGCCGAGGGCTGCCGCGCGCTGGCAGTGCACCTGCTGGATCTGGGCCTGCGCCGCGCCGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS CCA 72 bp GGGGCCCTGGAAAGCGGTGGGGTCGGCGGCAGGGCCTaGCTCCTCCAGCGCGCGCCGCAGGGCCTCCAAGGC +
Preference number: 6 (lower is better)
Translates to: GALESGGVGGRA*LLQRAPQGLQG
Trigger: GCCTTGGAGGCCCTGCGGCGCGCGCTGGAGGAGCCAGGCCCTGCCGCCGACCCCACCGCTTTCCAGGGCCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS CCA 72 bp AGGGAGCAGCGCAGCGCGCGCAGAGCGTCGTCCAGGTaGGGCGCGAGCGCGGCGCCGCACAGGTCCACGGCC +
Preference number: 6 (lower is better)
Translates to: REQRSARRASSR*GASAAPHRSTA
Trigger: GGCCGTGGACCTGTGCGGCGCCGCGCTCGCGCCCCACCTGGACGACGCTCTGCGCGCGCTGCGCTGCTCCCT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297440.11
CDS GCA 72 bp GCTGGGCACAGCCAGACCCACAGGACCCGAAGACGCTaGAGAGCCGGGGAACGAGGGGCCCAGCGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: AGHSQTHRTRRR*RAGERGAQRLV
Trigger: CACCAGCCGCTGGGCCCCTCGTTCCCCGGCTCTGCAGCGTCTTCGGGTCCTGTGGGTCTGGCTGTGCCCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS GCA 72 bp CCCTCAGCCCTCTTGGGCACCCGCACAGCAGGGACCTaGGTACAGCCGGCGCTCACAGCTGCGGTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: PSALLGTRTAGT*VQPALTAAVSR
Trigger: CCTGCTGACCGCAGCTGTGAGCGCCGGCTGTACGCAGGTCCCTGCTGTGCGGGTGCCCAAGAGGGCTGAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 72 bp TGTGCCAGCTCTGTGGCGATGGCTGCCAGGTGCGGCTaGAGGGCTTCTCGGGGGCAACCCCGCATGGCGGAG +
Preference number: 6 (lower is better)
Translates to: CASSVAMAARCG*RASRGQPRMAE
Trigger: CTCCGCCATGCGGGGTTGCCCCCGAGAAGCCCTCCAGCCGCACCTGGCAGCCATCGCCACAGAGCTGGCACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS CCA 72 bp CCTGGCAGATGTGGGCCTGTGCCAGCTCTGTGGCGATaGCTGCCAGGTGCGGCTGGAGGGCTTCTCGGGGGC +
Preference number: 6 (lower is better)
Translates to: PGRCGPVPALWR*LPGAAGGLLGG
Trigger: GCCCCCGAGAAGCCCTCCAGCCGCACCTGGCAGCCATCGCCACAGAGCTGGCACAGGCCCACATCTGCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS CCA 72 bp GCGGGTCTTGGGAGGGCTGCAGACAGGCCCTCAGCGTaGGCACGACGTGTGGCAGGGCTTCTCCCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: AGLGRAADRPSA*ARRVAGLLPGQ
Trigger: CTGCCCTGGGAGAAGCCCTGCCACACGTCGTGCCCACGCTGAGGGCCTGTCTGCAGCCCTCCCAAGACCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
ENST00000491496.1
CDS CAA 90 bp CAGCCGGGCAGGAGGCGTTGCACCGAAGCTGCTGGGACGCCTGACTaGAGCCTCCCGCCAGAGCACGAGTCTTGGGCCAAGTGCCGCCCT +
Preference number: 6 (lower is better)
Translates to: QPGRRRCTEAAGTPD*SLPPEHESWAKCRP
Trigger: AGGGCGGCACTTGGCCCAAGACTCGTGCTCTGGCGGGAGGCTCAAGTCAGGCGTCCCAGCAGCTTCGGTGCAACGCCTCCTGCCCGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS GCA 72 bp CAGGCCTGGAACAGGGTCCGGAGGACGACCTCCAGGTaGTGCGTGGCGTGGTCCTCGGCATGCAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: QAWNRVRRTTSR*CVAWSSACSSS
Trigger: GCTGCTGCTGCATGCCGAGGACCACGCCACGCAGCACCTGGAGGTCGTCCTCCGGACCCTGTTCCAGGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000437419.5
ENST00000440747.5
CDS GCA 72 bp TTGGAGGGCCTCCCCACGCAGCCGGGCAGGAGGCGTTaGACCGAAGCTGCTGGGACGCCTGACTTGAGCCTC +
Preference number: 6 (lower is better)
Translates to: LEGLPTQPGRRR*TEAAGTPDLSL
Trigger: GAGGCTCAAGTCAGGCGTCCCAGCAGCTTCGGTGCAACGCCTCCTGCCCGGCTGCGTGGGGAGGCCCTCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS CCA 72 bp CTCTGGCTCGAAGTCAGGCCTCGCGGTGAGACCAGCTaGTGTCTTGGAGGGCCTCCCCACGCAGCCGGGCAG +
Preference number: 6 (lower is better)
Translates to: LWLEVRPRGETS*CLGGPPHAAGQ
Trigger: CTGCCCGGCTGCGTGGGGAGGCCCTCCAAGACACCAGCTGGTCTCACCGCGAGGCCTGACTTCGAGCCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS CCA 72 bp GACGCTGCAGAGCCGGGGAACGAGGGGCCCAGCGGCTaGTGCTCCGGGTTCCCTGCCCGAGCACATTCCTAT +
Preference number: 6 (lower is better)
Translates to: DAAEPGNEGPSG*CSGFPARAHSY
Trigger: ATAGGAATGTGCTCGGGCAGGGAACCCGGAGCACCAGCCGCTGGGCCCCTCGTTCCCCGGCTCTGCAGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS TCA 72 bp GGGCAGGAGGCGTTGCACCGAAGCTGCTGGGACGCCTaGCTTGAGCCTCCCGCCAGAGCACGAGTCTTGGGC +
Preference number: 6 (lower is better)
Translates to: GQEALHRSCWDA*LEPPARARVLG
Trigger: GCCCAAGACTCGTGCTCTGGCGGGAGGCTCAAGTCAGGCGTCCCAGCAGCTTCGGTGCAACGCCTCCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS GCA 72 bp GCCTGGAACAGGGTCCGGAGGACGACCTCCAGGTGCTaGGTGGCGTGGTCCTCGGCATGCAGCAGCAGCACT +
Preference number: 6 (lower is better)
Translates to: AWNRVRRTTSRC*VAWSSACSSST
Trigger: AGTGCTGCTGCTGCATGCCGAGGACCACGCCACGCAGCACCTGGAGGTCGTCCTCCGGACCCTGTTCCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000437419.5
ENST00000440747.5
CDS GCA 72 bp TGCAGGAGCTCCGGCGAGTGTGCGGTCCAGTCAAGGTaGGACGCGGTCACCCGCTCCAGGAGGGGACCAATG +
Preference number: 6 (lower is better)
Translates to: CRSSGECAVQSR*DAVTRSRRGPM
Trigger: CATTGGTCCCCTCCTGGAGCGGGTGACCGCGTCGCACCTTGACTGGACCGCACACTCGCCGGAGCTCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS GCA 72 bp GCAGCCGTGCGGATGGCCGCGGCTGTCCTCCCCGCATaGCACTGCAGATTGGGGGCCAGGATGTCCTTTGTC +
Preference number: 6 (lower is better)
Translates to: AAVRMAAAVLPA*HCRLGARMSFV
Trigger: GACAAAGGACATCCTGGCCCCCAATCTGCAGTGGCATGCGGGGAGGACAGCCGCGGCCATCCGCACGGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS GCA 72 bp GCTGCAGAGCCGGGGAACGAGGGGCCCAGCGGCTGGTaGTCCGGGTTCCCTGCCCGAGCACATTCCTATTCA +
Preference number: 6 (lower is better)
Translates to: AAEPGNEGPSGW*SGFPARAHSYS
Trigger: TGAATAGGAATGTGCTCGGGCAGGGAACCCGGAGCACCAGCCGCTGGGCCCCTCGTTCCCCGGCTCTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 72 bp CTGCGTGGCGTGGTCCTCGGCATGCAGCAGCAGCACTaGGAGCAGCTGTGCCGACTTCACTCGGGTCCCCAC +
Preference number: 6 (lower is better)
Translates to: LRGVVLGMQQQH*EQLCRLHSGPH
Trigger: GTGGGGACCCGAGTGAAGTCGGCACAGCTGCTCCCAGTGCTGCTGCTGCATGCCGAGGACCACGCCACGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000437419.5
ENST00000440747.5
CDS CCA 72 bp CTTTGGACCACGGCTGCCTCCTCGTCGGTGCAGGCCTaGAACAGGGTCCGGAGGACGACCTCCAGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: LWTTAASSSVQA*NRVRRTTSRCC
Trigger: GCAGCACCTGGAGGTCGTCCTCCGGACCCTGTTCCAGGCCTGCACCGACGAGGAGGCAGCCGTGGTCCAAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000437419.5
ENST00000440747.5
CDS TCA 72 bp GTACTCGCTGCTCTGGCTCGAAGTCAGGCCTCGCGGTaGGACCAGCTGGTGTCTTGGAGGGCCTCCCCACGC +
Preference number: 6 (lower is better)
Translates to: VLAALARSQASR*DQLVSWRASPR
Trigger: GCGTGGGGAGGCCCTCCAAGACACCAGCTGGTCTCACCGCGAGGCCTGACTTCGAGCCAGAGCAGCGAGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS GCA 72 bp AACAGCTTCAGGCGCATCTGCGGGTCTTGGGAGGGCTaGAGACAGGCCCTCAGCGTGGGCACGACGTGTGGC +
Preference number: 6 (lower is better)
Translates to: NSFRRICGSWEG*RQALSVGTTCG
Trigger: GCCACACGTCGTGCCCACGCTGAGGGCCTGTCTGCAGCCCTCCCAAGACCCGCAGATGCGCCTGAAGCTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
ENST00000491496.1
CDS GCA 72 bp TACAGCCGGCGCTCACAGCTGCGGTCAGCAGGAAGGTaGTCTGCGCAGACGATGGTCAGTGGCGACTCCCCG +
Preference number: 6 (lower is better)
Translates to: YSRRSQLRSAGR*SAQTMVSGDSP
Trigger: CGGGGAGTCGCCACTGACCATCGTCTGCGCAGAGCACCTTCCTGCTGACCGCAGCTGTGAGCGCCGGCTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS GCA 72 bp CACAGCAGGGACCTGCGTACAGCCGGCGCTCACAGCTaGGGTCAGCAGGAAGGTGCTCTGCGCAGACGATGG +
Preference number: 6 (lower is better)
Translates to: HSRDLRTAGAHS*GQQEGALRRRW
Trigger: CCATCGTCTGCGCAGAGCACCTTCCTGCTGACCGCAGCTGTGAGCGCCGGCTGTACGCAGGTCCCTGCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 72 bp ACGCCTGACTTGAGCCTCCCGCCAGAGCACGAGTCTTaGGCCAAGTGCCGCCCTGCCACGAGAACCACGCTG +
Preference number: 6 (lower is better)
Translates to: TPDLSLPPEHES*AKCRPATRTTL
Trigger: CAGCGTGGTTCTCGTGGCAGGGCGGCACTTGGCCCAAGACTCGTGCTCTGGCGGGAGGCTCAAGTCAGGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS CAA 72 bp CCGTGCAGAGGCAGAGCCCGGACCTACCCCTGGGAGTaGATGGTGTCCGTGGCTCTGAGCAGCACGGTGGAC +
Preference number: 6 (lower is better)
Translates to: PCRGRARTYPWE*MVSVALSSTVD
Trigger: GTCCACCGTGCTGCTCAGAGCCACGGACACCATCAACTCCCAGGGGTAGGTCCGGGCTCTGCCTCTGCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CAA 90 bp CCCACCACCCAGTCGGTGATGTCGTGGCACAGGGCAGGGAGGATCTaGGAGAGGTTCCTGAAGACGAGCTCCCGGCAGCCCAGCACAGGG +
Preference number: 6 (lower is better)
Translates to: PTTQSVMSWHRAGRI*ERFLKTSSRQPSTG
Trigger: CCCTGTGCTGGGCTGCCGGGAGCTCGTCTTCAGGAACCTCTCCAAGATCCTCCCTGCCCTGTGCCACGACATCACCGACTGGGTGGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000437419.5
ENST00000440747.5
CDS TCA 72 bp ACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTGGCTaGAACCAGCGTGGTCACTGTGTGGCTGGCACGGCC +
Preference number: 6 (lower is better)
Translates to: TLAQVGTRVCRG*NQRGHCVAGTA
Trigger: GGCCGTGCCAGCCACACAGTGACCACGCTGGTTTCAGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS TCA 72 bp GGAGGCGTTGCACCGAAGCTGCTGGGACGCCTGACTTaGGCCTCCCGCCAGAGCACGAGTCTTGGGCCAAGT +
Preference number: 6 (lower is better)
Translates to: GGVAPKLLGRLT*ASRQSTSLGPS
Trigger: ACTTGGCCCAAGACTCGTGCTCTGGCGGGAGGCTCAAGTCAGGCGTCCCAGCAGCTTCGGTGCAACGCCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS GCA 72 bp ATGGTCTGCATCAGGGGCCCGATCAGAGACTCCGACTaGATGTGGAAGTGGTCGGGCGTGGCCTGCGCCAGG +
Preference number: 6 (lower is better)
Translates to: MVCIRGPIRDSD*MWKWSGVACAR
Trigger: CCTGGCGCAGGCCACGCCCGACCACTTCCACATGCAGTCGGAGTCTCTGATCGGGCCCCTGATGCAGACCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000438961.1
CDS GCA 72 bp GACGATGACACTGAACTGCAGGAGCTCCGGCGAGTGTaGGGTCCAGTCAAGGTGCGACGCGGTCACCCGCTC +
Preference number: 6 (lower is better)
Translates to: DDDTELQELRRV*GPVKVRRGHPL
Trigger: GAGCGGGTGACCGCGTCGCACCTTGACTGGACCGCACACTCGCCGGAGCTCCTGCAGTTCAGTGTCATCGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS GCA 72 bp TTGAGCCTCCCGCCAGAGCACGAGTCTTGGGCCAAGTaGCGCCCTGCCACGAGAACCACGCTGCTTCTGACC +
Preference number: 6 (lower is better)
Translates to: LSLPPEHESWAK*RPATRTTLLLT
Trigger: GGTCAGAAGCAGCGTGGTTCTCGTGGCAGGGCGGCACTTGGCCCAAGACTCGTGCTCTGGCGGGAGGCTCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS GCA 72 bp GAACGAGGGGCCCAGCGGCTGGTGCTCCGGGTTCCCTaGCCGAGCACATTCCTATTCACAGAGGGACTCGAG +
Preference number: 6 (lower is better)
Translates to: ERGAQRLVLRVP*PSTFLFTEGLE
Trigger: CTCGAGTCCCTCTGTGAATAGGAATGTGCTCGGGCAGGGAACCCGGAGCACCAGCCGCTGGGCCCCTCGTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS GCA 72 bp AGGGGGCCGTGGCCCAGATGCCCAAATGCGCTCAGATaGCCAAACGCGTGCAGCCTTTCCGCCAGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: RGPWPRCPNALR*PNACSLSASSC
Trigger: ACAGGAGCTGGCGGAAAGGCTGCACGCGTTTGGGCATCTGAGCGCATTTGGGCATCTGGGCCACGGCCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS CCA 72 bp AGGATGGAGAACAGCTTCAGGCGCATCTGCGGGTCTTaGGAGGGCTGCAGACAGGCCCTCAGCGTGGGCACG +
Preference number: 6 (lower is better)
Translates to: RMENSFRRICGS*EGCRQALSVGT
Trigger: CGTGCCCACGCTGAGGGCCTGTCTGCAGCCCTCCCAAGACCCGCAGATGCGCCTGAAGCTGTTCTCCATCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
ENST00000491496.1
CDS CCA 72 bp TGGCCGCGGCTGTCCTCCCCGCATGCCACTGCAGATTaGGGGCCAGGATGTCCTTTGTCACCGTCTCGAGGT +
Preference number: 6 (lower is better)
Translates to: WPRLSSPHATAD*GPGCPLSPSRG
Trigger: ACCTCGAGACGGTGACAAAGGACATCCTGGCCCCCAATCTGCAGTGGCATGCGGGGAGGACAGCCGCGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS CCA 72 bp CAGGGGTCACTGCACACGCCCACCTCAGACTTGGTGTaGGGAACCCTCACCCAGAGTGCTGTGGGGGAGGGA +
Preference number: 6 (lower is better)
Translates to: QGSLHTPTSDLV*GTLTQSAVGEG
Trigger: TCCCTCCCCCACAGCACTCTGGGTGAGGGTTCCCCACACCAAGTCTGAGGTGGGCGTGTGCAGTGACCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CAA 72 bp CAGGATGGAGAACAGCTTCAGGCGCATCTGCGGGTCTaGGGAGGGCTGCAGACAGGCCCTCAGCGTGGGCAC +
Preference number: 6 (lower is better)
Translates to: QDGEQLQAHLRV*GGLQTGPQRGH
Trigger: GTGCCCACGCTGAGGGCCTGTCTGCAGCCCTCCCAAGACCCGCAGATGCGCCTGAAGCTGTTCTCCATCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
ENST00000491496.1
CDS CAA 72 bp AGGAGGCGTTGCACCGAAGCTGCTGGGACGCCTGACTaGAGCCTCCCGCCAGAGCACGAGTCTTGGGCCAAG +
Preference number: 6 (lower is better)
Translates to: RRRCTEAAGTPD*SLPPEHESWAK
Trigger: CTTGGCCCAAGACTCGTGCTCTGGCGGGAGGCTCAAGTCAGGCGTCCCAGCAGCTTCGGTGCAACGCCTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS TCA 72 bp GTGCCGACTTCACTCGGGTCCCCACCACCCAGTCGGTaGTGTCGTGGCACAGGGCAGGGAGGATCTTGGAGA +
Preference number: 6 (lower is better)
Translates to: VPTSLGSPPPSR*CRGTGQGGSWR
Trigger: TCTCCAAGATCCTCCCTGCCCTGTGCCACGACATCACCGACTGGGTGGTGGGGACCCGAGTGAAGTCGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000437419.5
ENST00000440747.5
CDS GCA 72 bp CCTGTGGCTTCAATGGCGGCCACACGGACCTTCCAGTaGTGGTGGGAGATGGTCTGCATCAGGGGCCCGATC +
Preference number: 6 (lower is better)
Translates to: PVASMAATRTFQ*WWEMVCIRGPI
Trigger: GATCGGGCCCCTGATGCAGACCATCTCCCACCAGCACTGGAAGGTCCGTGTGGCCGCCATTGAAGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000438961.1
CDS GCA 72 bp TGGTACAACTTTGGACCACGGCTGCCTCCTCGTCGGTaGAGGCCTGGAACAGGGTCCGGAGGACGACCTCCA +
Preference number: 6 (lower is better)
Translates to: WYNFGPRLPPRR*RPGTGSGGRPP
Trigger: TGGAGGTCGTCCTCCGGACCCTGTTCCAGGCCTGCACCGACGAGGAGGCAGCCGTGGTCCAAAGTTGTACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000437419.5
ENST00000440747.5
CDS GCA 72 bp GAGCTCTGCGGATCTGGTACAACTTTGGACCACGGCTaGCTCCTCGTCGGTGCAGGCCTGGAACAGGGTCCG +
Preference number: 6 (lower is better)
Translates to: ELCGSGTTLDHG*LLVGAGLEQGP
Trigger: CGGACCCTGTTCCAGGCCTGCACCGACGAGGAGGCAGCCGTGGTCCAAAGTTGTACCAGATCCGCAGAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS GCA 72 bp AGGGCAGGGCCTGACTGTGCGACGATGACACTGAACTaGAGGAGCTCCGGCGAGTGTGCGGTCCAGTCAAGG +
Preference number: 6 (lower is better)
Translates to: RAGPDCATMTLN*RSSGECAVQSR
Trigger: CCTTGACTGGACCGCACACTCGCCGGAGCTCCTGCAGTTCAGTGTCATCGTCGCACAGTCAGGCCCTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000440747.5
ENST00000491496.1
CDS GCA 72 bp CCCGCCAGAGCACGAGTCTTGGGCCAAGTGCCGCCCTaGCACGAGAACCACGCTGCTTCTGACCCAGTTTCT +
Preference number: 6 (lower is better)
Translates to: PARARVLGQVPP*HENHAASDPVS
Trigger: AGAAACTGGGTCAGAAGCAGCGTGGTTCTCGTGGCAGGGCGGCACTTGGCCCAAGACTCGTGCTCTGGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS GCA 72 bp TGCTCTGAGCAAAGTAAGTGGCAGGGCCCTAAGAGCTaGCTCAGCAGTGGCACCCGGGCGGGGCCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: CSEQSKWQGPKS*LSSGTRAGPLP
Trigger: AGGAAGAGGCCCCGCCCGGGTGCCACTGCTGAGGCAGCTCTTAGGGCCCTGCCACTTACTTTGCTCAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 72 bp CCCTTGCCACACGGAGACGCAATGTACTCGCTGCTCTaGCTCGAAGTCAGGCCTCGCGGTGAGACCAGCTGG +
Preference number: 6 (lower is better)
Translates to: PLPHGDAMYSLL*LEVRPRGETSW
Trigger: CCAGCTGGTCTCACCGCGAGGCCTGACTTCGAGCCAGAGCAGCGAGTACATTGCGTCTCCGTGTGGCAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS CCA 72 bp CGTTGCCAAAATGGATCACTGCGCCTGTGGCTTCAATaGCGGCCACACGGACCTTCCAGTGCGGGCGTGGCC +
Preference number: 6 (lower is better)
Translates to: RCQNGSLRLWLQ*RPHGPSSAGVA
Trigger: GGCCACGCCCGCACTGGAAGGTCCGTGTGGCCGCCATTGAAGCCACAGGCGCAGTGATCCATTTTGGCAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440747.5
CDS CCA 72 bp AAGCTCAGGGGTCACTGCACACGCCCACCTCAGACTTaGTGTGGGGAACCCTCACCCAGAGTGCTGTGGGGG +
Preference number: 6 (lower is better)
Translates to: KLRGHCTRPPQT*CGEPSPRVLWG
Trigger: CCCCCACAGCACTCTGGGTGAGGGTTCCCCACACCAAGTCTGAGGTGGGCGTGTGCAGTGACCCCTGAGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 72 bp CTATGGGCCCGGACAGGATCCTCCGAGGCCTCCTGCTaGCGCGGTCGACTATGGAAGTACACAGAGTGGCAC +
Preference number: 6 (lower is better)
Translates to: LWARTGSSEASC*RGRLWKYTEWH
Trigger: GTGCCACTCTGTGTACTTCCATAGTCGACCGCGCCAGCAGGAGGCCTCGGAGGATCCTGTCCGGGCCCATAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS CAA 72 bp CTGCTCGGTAGTGGACTGAGACCCCCGCACCTGCCCTaGCCACACGGAGACGCAATGTACTCGCTGCTCTGG +
Preference number: 6 (lower is better)
Translates to: LLGSGLRPPHLP*PHGDAMYSLLW
Trigger: CCAGAGCAGCGAGTACATTGCGTCTCCGTGTGGCAAGGGCAGGTGCGGGGGTCTCAGTCCACTACCGAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS CAA 90 bp CAGAGCAGGCTGCTCGGTAGTGGACTGAGACCCCCGCACCTGCCCTaGCCACACGGAGACGCAATGTACTCGCTGCTCTGGCTCGAAGTC +
Preference number: 6 (lower is better)
Translates to: QSRLLGSGLRPPHLP*PHGDAMYSLLWLEV
Trigger: GACTTCGAGCCAGAGCAGCGAGTACATTGCGTCTCCGTGTGGCAAGGGCAGGTGCGGGGGTCTCAGTCCACTACCGAGCAGCCTGCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS GCA 72 bp GCCACACGGACCTTCCAGTGCTGGTGGGAGATGGTCTaGATCAGGGGCCCGATCAGAGACTCCGACTGCATG +
Preference number: 6 (lower is better)
Translates to: ATRTFQCWWEMV*IRGPIRDSDCM
Trigger: CATGCAGTCGGAGTCTCTGATCGGGCCCCTGATGCAGACCATCTCCCACCAGCACTGGAAGGTCCGTGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000438961.1
CDS GCA 72 bp CATCTATGGGCCCGGACAGGATCCTCCGAGGCCTCCTaGTGGCGCGGTCGACTATGGAAGTACACAGAGTGG +
Preference number: 6 (lower is better)
Translates to: HLWARTGSSEAS*WRGRLWKYTEW
Trigger: CCACTCTGTGTACTTCCATAGTCGACCGCGCCAGCAGGAGGCCTCGGAGGATCCTGTCCGGGCCCATAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS CCA 72 bp GCTTCAATGGCGGCCACACGGACCTTCCAGTGCTGGTaGGAGATGGTCTGCATCAGGGGCCCGATCAGAGAC +
Preference number: 6 (lower is better)
Translates to: ASMAATRTFQCW*EMVCIRGPIRD
Trigger: GTCTCTGATCGGGCCCCTGATGCAGACCATCTCCCACCAGCACTGGAAGGTCCGTGTGGCCGCCATTGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000438961.1
CDS CCA 72 bp GTGGCTTCAATGGCGGCCACACGGACCTTCCAGTGCTaGTGGGAGATGGTCTGCATCAGGGGCCCGATCAGA +
Preference number: 6 (lower is better)
Translates to: VASMAATRTFQC*WEMVCIRGPIR
Trigger: TCTGATCGGGCCCCTGATGCAGACCATCTCCCACCAGCACTGGAAGGTCCGTGTGGCCGCCATTGAAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000438961.1
CDS CAA 72 bp CTGGCAGCCAGCTGCCTGACCTCAGGCACCTCGTCGTaGAGGCTACTGAGCAGCAGAGGGATGAGCTTGTGG +
Preference number: 6 (lower is better)
Translates to: LAASCLTSGTSS*RLLSSRGMSLW
Trigger: CCACAAGCTCATCCCTCTGCTGCTCAGTAGCCTCAACGACGAGGTGCCTGAGGTCAGGCAGCTGGCTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297440.11
ENST00000437419.5
ENST00000438961.1
ENST00000440747.5
CDS TCA 72 bp GCCCGCCGGACCTGCGGGACGTCATCAAACAGTCGCTaGGCAAAATGGGAAAGCACGTCGTCCACGGACTTC +
Preference number: 6 (lower is better)
Translates to: ARRTCGTSSNSR*AKWESTSSTDF
Trigger: GAAGTCCGTGGACGACGTGCTTTCCCATTTTGCTCAGCGACTGTTTGATGACGTCCCGCAGGTCCGGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000438961.1
ENST00000440747.5
CDS CCA 72 bp ACAAACTCTGGCTCAGGTGGGGACAAGGGTGTGCCGTaGCTGAAACCAGCGTGGTCACTGTGTGGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: TNSGSGGDKGVP*LKPAWSLCGWH
Trigger: GTGCCAGCCACACAGTGACCACGCTGGTTTCAGCCACGGCACACCCTTGTCCCCACCTGAGCCAGAGTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS CCA 72 bp CGGACTTCCCGTTGCCAAAATGGATCACTGCGCCTGTaGCTTCAATGGCGGCCACACGGACCTTCCAGTGCG +
Preference number: 6 (lower is better)
Translates to: RTSRCQNGSLRL*LQWRPHGPSSA
Trigger: CGCACTGGAAGGTCCGTGTGGCCGCCATTGAAGCCACAGGCGCAGTGATCCATTTTGGCAACGGGAAGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440747.5
CDS CCA 72 bp AGCTGCGGTCAGCAGGAAGGTGCTCTGCGCAGACGATaGTCAGTGGCGACTCCCCGCCCACCATTTCTACTT +
Preference number: 6 (lower is better)
Translates to: SCGQQEGALRRR*SVATPRPPFLL
Trigger: AAGTAGAAATGGTGGGCGGGGAGTCGCCACTGACCATCGTCTGCGCAGAGCACCTTCCTGCTGACCGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CAA 72 bp CCGCATGCCACTGCAGATTGGGGGCCAGGATGTCCTTaGTCACCGTCTCGAGGTAGCTGGGAAACTGCCCCT +
Preference number: 6 (lower is better)
Translates to: PHATADWGPGCP*SPSRGSWETAP
Trigger: AGGGGCAGTTTCCCAGCTACCTCGAGACGGTGACAAAGGACATCCTGGCCCCCAATCTGCAGTGGCATGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS CAA 90 bp TCCTCCACTGTCCCTCCCAGTGCTCCTAGAGGGCACCCATGCTTCTaGCCCTTACTTCAAAGCCGTACACCTGGAGGCCCTAGACCCTCG +
Preference number: 6 (lower is better)
Translates to: SSTVPPSAPRGHPCF*PLLQSRTPGGPRPS
Trigger: CGAGGGTCTAGGGCCTCCAGGTGTACGGCTTTGAAGTAAGGGCAAGAAGCATGGGTGCCCTCTAGGAGCACTGGGAGGGACAGTGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS GCA 72 bp GTCGTCCACGGACTTCCCGTTGCCAAAATGGATCACTaGGCCTGTGGCTTCAATGGCGGCCACACGGACCTT +
Preference number: 6 (lower is better)
Translates to: VVHGLPVAKMDH*ACGFNGGHTDL
Trigger: AAGGTCCGTGTGGCCGCCATTGAAGCCACAGGCGCAGTGATCCATTTTGGCAACGGGAAGTCCGTGGACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000438961.1
ENST00000440747.5
CDS GCA 72 bp TCCAGCTTGTCCTTCAGGTCCTCCTCATTCTCCTTCTaGCACTGCAGGCCAACGTCCTCCCAGAGGCTGGCA +
Preference number: 6 (lower is better)
Translates to: SSLSFRSSSFSF*HCRPTSSQRLA
Trigger: TGCCAGCCTCTGGGAGGACGTTGGCCTGCAGTGGCAGAAGGAGAATGAGGAGGACCTGAAGGACAAGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297440.11
ENST00000437419.5
ENST00000438961.1
ENST00000440747.5
CDS GCA 72 bp GAAAATAAACAGGGGGCCGTGGCCCAGATGCCCAAATaGGCTCAGATGCCCAAACGCGTGCAGCCTTTCCGC +
Preference number: 6 (lower is better)
Translates to: ENKQGAVAQMPK*AQMPKRVQPFR
Trigger: GCGGAAAGGCTGCACGCGTTTGGGCATCTGAGCGCATTTGGGCATCTGGGCCACGGCCCCCTGTTTATTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS CCA 72 bp CGTTGCCAAAATGGATCACTGCGCCTGTGGCTTCAATaGCGGCCACACGGACCTTCCAGTGCTGGTGGGAGA +
Preference number: 6 (lower is better)
Translates to: RCQNGSLRLWLQ*RPHGPSSAGGR
Trigger: TCTCCCACCAGCACTGGAAGGTCCGTGTGGCCGCCATTGAAGCCACAGGCGCAGTGATCCATTTTGGCAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000438961.1
CDS CCA 72 bp CGGACTTCCCGTTGCCAAAATGGATCACTGCGCCTGTaGCTTCAATGGCGGCCACACGGACCTTCCAGTGCT +
Preference number: 6 (lower is better)
Translates to: RTSRCQNGSLRL*LQWRPHGPSSA
Trigger: AGCACTGGAAGGTCCGTGTGGCCGCCATTGAAGCCACAGGCGCAGTGATCCATTTTGGCAACGGGAAGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000438961.1
CDS CCA 72 bp CCAGCTGACGGCACCTTTTGCTCTGAGCAAAGTAAGTaGCAGGGCCCTAAGAGCTGCCTCAGCAGTGGCACC +
Preference number: 6 (lower is better)
Translates to: PADGTFCSEQSK*QGPKSCLSSGT
Trigger: GGTGCCACTGCTGAGGCAGCTCTTAGGGCCCTGCCACTTACTTTGCTCAGAGCAAAAGGTGCCGTCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 72 bp GTCAGCAGGAAGGTGCTCTGCGCAGACGATGGTCAGTaGCGACTCCCCGCCCACCATTTCTACTTCAGCAGA +
Preference number: 6 (lower is better)
Translates to: VSRKVLCADDGQ*RLPAHHFYFSR
Trigger: TCTGCTGAAGTAGAAATGGTGGGCGGGGAGTCGCCACTGACCATCGTCTGCGCAGAGCACCTTCCTGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CAA 90 bp AAGCCAGGCAGAATCGGCTCACGCTGGCCTGTCTGCTGTTCATGTTaGTGTCTGTCTGTCCTGGGAGGCCTGGATGTCTGTGCTCCCAAC +
Preference number: 6 (lower is better)
Translates to: KPGRIGSRWPVCCSC*CLSVLGGLDVCAPN
Trigger: GTTGGGAGCACAGACATCCAGGCCTCCCAGGACAGACAGACACAAACATGAACAGCAGACAGGCCAGCGTGAGCCGATTCTGCCTGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS GCA 72 bp AAACACCTCAGGGCTGACAAACGTCCCGACGAGCTCTaGGGATCTGGTACAACTTTGGACCACGGCTGCCTC +
Preference number: 6 (lower is better)
Translates to: KHLRADKRPDEL*GSGTTLDHGCL
Trigger: GAGGCAGCCGTGGTCCAAAGTTGTACCAGATCCGCAGAGCTCGTCGGGACGTTTGTCAGCCCTGAGGTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS GCA 72 bp TCCCTCCCAGTGCTCCTAGAGGGCACCCATGCTTCTTaGCCTTACTTCAAAGCCGTACACCTGGAGGCCCTA +
Preference number: 6 (lower is better)
Translates to: SLPVLLEGTHAS*PYFKAVHLEAL
Trigger: TAGGGCCTCCAGGTGTACGGCTTTGAAGTAAGGGCAAGAAGCATGGGTGCCCTCTAGGAGCACTGGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 72 bp GAAAGCACGTCGTCCACGGACTTCCCGTTGCCAAAATaGATCACTGCGCCTGTGGCTTCAATGGCGGCCACA +
Preference number: 6 (lower is better)
Translates to: ESTSSTDFPLPK*ITAPVASMAAT
Trigger: TGTGGCCGCCATTGAAGCCACAGGCGCAGTGATCCATTTTGGCAACGGGAAGTCCGTGGACGACGTGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000438961.1
ENST00000440747.5
CDS CCA 72 bp CCACTATTGTCAGCAGCACGTCCAAGAGCTGCAGGCTaGCCACGCCACAGTCCTCATGACACACAGACACCA +
Preference number: 6 (lower is better)
Translates to: PLLSAARPRAAG*PRHSPHDTQTP
Trigger: TGGTGTCTGTGTGTCATGAGGACTGTGGCGTGGCCAGCCTGCAGCTCTTGGACGTGCTGCTGACAATAGTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS CCA 72 bp GCCCTGAGAACCTCTCATGATTCATGGTGTCCAAGGTaGAGACACCATGGCAGACGCAGCCCTCAGCCCTCT +
Preference number: 6 (lower is better)
Translates to: ALRTSHDSWCPR*RHHGRRSPQPS
Trigger: AGAGGGCTGAGGGCTGCGTCTGCCATGGTGTCTCCACCTTGGACACCATGAATCATGAGAGGTTCTCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 72 bp CTGTGGGAGGCAGCCCTGAGAACCTCTCATGATTCATaGTGTCCAAGGTGGAGACACCATGGCAGACGCAGC +
Preference number: 6 (lower is better)
Translates to: LWEAALRTSHDS*CPRWRHHGRRS
Trigger: GCTGCGTCTGCCATGGTGTCTCCACCTTGGACACCATGAATCATGAGAGGTTCTCAGGGCTGCCTCCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CAA 90 bp GAGCACATTCCTATTCACAGAGGGACTCGAGGTCCACTGTGGGGCTaGACTTCCAGAAACGGTGCAGCCTCAAAGCCAGGAGCCTCTTGC +
Preference number: 6 (lower is better)
Translates to: EHIPIHRGTRGPLWG*TSRNGAASKPGASC
Trigger: GCAAGAGGCTCCTGGCTTTGAGGCTGCACCGTTTCTGGAAGTCAAGCCCCACAGTGGACCTCGAGTCCCTCTGTGAATAGGAATGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS TCA 72 bp CTATTCACAGAGGGACTCGAGGTCCACTGTGGGGCTTaGCTTCCAGAAACGGTGCAGCCTCAAAGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: LFTEGLEVHCGA*LPETVQPQSQE
Trigger: CTCCTGGCTTTGAGGCTGCACCGTTTCTGGAAGTCAAGCCCCACAGTGGACCTCGAGTCCCTCTGTGAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 72 bp AGATCAGTCGCGTCATCTTCGAATCCTCCTCCAGGGTaGTCAGGACCTGGGGCATCAGTGTTTCCTGCACGT +
Preference number: 6 (lower is better)
Translates to: RSVASSSNPPPG*SGPGASVFPAR
Trigger: ACGTGCAGGAAACACTGATGCCCCAGGTCCTGACCACCCTGGAGGAGGATTCGAAGATGACGCGACTGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS CCA 72 bp GGATCCTCCGAGGCCTCCTGCTGGCGCGGTCGACTATaGAAGTACACAGAGTGGCACTGGCTATTGTGTTTT +
Preference number: 6 (lower is better)
Translates to: GSSEASCWRGRL*KYTEWHWLLCF
Trigger: AAAACACAATAGCCAGTGCCACTCTGTGTACTTCCATAGTCGACCGCGCCAGCAGGAGGCCTCGGAGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS CAA 72 bp CCTATTCACAGAGGGACTCGAGGTCCACTGTGGGGCTaGACTTCCAGAAACGGTGCAGCCTCAAAGCCAGGA +
Preference number: 6 (lower is better)
Translates to: PIHRGTRGPLWG*TSRNGAASKPG
Trigger: TCCTGGCTTTGAGGCTGCACCGTTTCTGGAAGTCAAGCCCCACAGTGGACCTCGAGTCCCTCTGTGAATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CAA 90 bp TGCTGGCGCGGTCGACTATGGAAGTACACAGAGTGGCACTGGCTATaGTGTTTTTACGATGGTCACTCCCTGGATGGCCTGCAGGTCCAC +
Preference number: 6 (lower is better)
Translates to: CWRGRLWKYTEWHWL*CFYDGHSLDGLQVH
Trigger: GTGGACCTGCAGGCCATCCAGGGAGTGACCATCGTAAAAACACAATAGCCAGTGCCACTCTGTGTACTTCCATAGTCGACCGCGCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS TCA 72 bp GCGTCGATAAGATCAGCTTCAGAAACACCTCAGGGCTaGCAAACGTCCCGACGAGCTCTGCGGATCTGGTAC +
Preference number: 6 (lower is better)
Translates to: ASIRSASETPQG*QTSRRALRIWY
Trigger: GTACCAGATCCGCAGAGCTCGTCGGGACGTTTGTCAGCCCTGAGGTGTTTCTGAAGCTGATCTTATCGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297440.11
ENST00000440747.5
CDS TCA 72 bp CAGGAAACAAAATTTCCTGCAGTACGACAGGCGGGCTaGGGCCCGAGAGCAGAGATGAGGGTCATGAAGGAG +
Preference number: 6 (lower is better)
Translates to: QETKFPAVRQAG*GPRAEMRVMKE
Trigger: CTCCTTCATGACCCTCATCTCTGCTCTCGGGCCTCAGCCCGCCTGTCGTACTGCAGGAAATTTTGTTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS TCA 72 bp AGAAAGCCTGTGGGAGGCAGCCCTGAGAACCTCTCATaGTTCATGGTGTCCAAGGTGGAGACACCATGGCAG +
Preference number: 6 (lower is better)
Translates to: RKPVGGSPENLS*FMVSKVETPWQ
Trigger: CTGCCATGGTGTCTCCACCTTGGACACCATGAATCATGAGAGGTTCTCAGGGCTGCCTCCCACAGGCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS TCA 72 bp ACTCAGGACATCCTTCCTTCCCCACCAAGGAGGCCATaGTTCATCCAACACTTCACCCTGGGAAGCCCAGAG +
Preference number: 6 (lower is better)
Translates to: TQDILPSPPRRP*FIQHFTLGSPE
Trigger: CTCTGGGCTTCCCAGGGTGAAGTGTTGGATGAATCATGGCCTCCTTGGTGGGGAAGGAAGGATGTCCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS GCA 72 bp TTTGTAGTGAAAATAAACAGGGGGCCGTGGCCCAGATaGCCAAATGCGCTCAGATGCCCAAACGCGTGCAGC +
Preference number: 6 (lower is better)
Translates to: FVVKINRGPWPR*PNALRCPNACS
Trigger: GCTGCACGCGTTTGGGCATCTGAGCGCATTTGGGCATCTGGGCCACGGCCCCCTGTTTATTTTCACTACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS TCA 72 bp CCAGGTAAGACACAGAAAGCCTGTGGGAGGCAGCCCTaGGAACCTCTCATGATTCATGGTGTCCAAGGTGGA +
Preference number: 6 (lower is better)
Translates to: PGKTQKACGRQP*EPLMIHGVQGG
Trigger: TCCACCTTGGACACCATGAATCATGAGAGGTTCTCAGGGCTGCCTCCCACAGGCTTTCTGTGTCTTACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS GCA 72 bp CAAAATGGGAAAGCACGTCGTCCACGGACTTCCCGTTaGCAAAATGGATCACTGCGCCTGTGGCTTCAATGG +
Preference number: 6 (lower is better)
Translates to: QNGKARRPRTSR*QNGSLRLWLQW
Trigger: CCATTGAAGCCACAGGCGCAGTGATCCATTTTGGCAACGGGAAGTCCGTGGACGACGTGCTTTCCCATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000438961.1
ENST00000440747.5
CDS CCA 72 bp CACATTCCTATTCACAGAGGGACTCGAGGTCCACTGTaGGGCTTGACTTCCAGAAACGGTGCAGCCTCAAAG +
Preference number: 6 (lower is better)
Translates to: HIPIHRGTRGPL*GLTSRNGAASK
Trigger: CTTTGAGGCTGCACCGTTTCTGGAAGTCAAGCCCCACAGTGGACCTCGAGTCCCTCTGTGAATAGGAATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CAA 72 bp GCAAAATGGGAAAGCACGTCGTCCACGGACTTCCCGTaGCCAAAATGGATCACTGCGCCTGTGGCTTCAATG +
Preference number: 6 (lower is better)
Translates to: AKWESTSSTDFP*PKWITAPVASM
Trigger: CATTGAAGCCACAGGCGCAGTGATCCATTTTGGCAACGGGAAGTCCGTGGACGACGTGCTTTCCCATTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000438961.1
ENST00000440747.5
CDS CAA 72 bp GTGACCAAGGTGGAGGCGGCTGCCATCCTCACATCGTaGGACACGTCATCTAGGCGTTTTAAGAGTTCAGGA +
Preference number: 6 (lower is better)
Translates to: VTKVEAAAILTS*DTSSRRFKSSG
Trigger: TCCTGAACTCTTAAAACGCCTAGATGACGTGTCCAACGATGTGAGGATGGCAGCCGCCTCCACCTTGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS CAA 72 bp GTGACCAAGGTGGAGGCGGCTGCCATCCTCACATCGTaGGACACGTCATCTAGGCGTTTTAAGAGTTCTGGA +
Preference number: 6 (lower is better)
Translates to: VTKVEAAAILTS*DTSSRRFKSSG
Trigger: TCCAGAACTCTTAAAACGCCTAGATGACGTGTCCAACGATGTGAGGATGGCAGCCGCCTCCACCTTGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461576.1
CDS GCA 72 bp GTACAGGTACTGGACACTGCTCTGATAGTAGGATTTTaGGTTGGCACCCTTGACACACTGCAGCCAGGTGAC +
Preference number: 6 (lower is better)
Translates to: VQVLDTALIVGF*VGTLDTLQPGD
Trigger: GTCACCTGGCTGCAGTGTGTCAAGGGTGCCAACGCAAAATCCTACTATCAGAGCAGTGTCCAGTACCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
ENST00000461576.1
CDS GCA 72 bp GCCGAGTGTGAGTTCCAGAGGGAAGGGCCTGGACCCTaGTGTGTTATCTGCATGGCATCTACACAAATATCA +
Preference number: 6 (lower is better)
Translates to: AECEFQREGPGP*CVICMASTQIS
Trigger: TGATATTTGTGTAGATGCCATGCAGATAACACAGCAGGGTCCAGGCCCTTCCCTCTGGAACTCACACTCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS GCA 72 bp CAGGTCCACTTTTGTACCAGTTTAGGGTTCCTTTCATaGACGACTAAGCCAGGCAGAATCGGCTCACGCTGG +
Preference number: 6 (lower is better)
Translates to: QVHFCTSLGFLS*TTKPGRIGSRW
Trigger: CCAGCGTGAGCCGATTCTGCCTGGCTTAGTCGTGCATGAAAGGAACCCTAAACTGGTACAAAAGTGGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS CCA 72 bp TCCTGCTGGCGCGGTCGACTATGGAAGTACACAGAGTaGCACTGGCTATTGTGTTTTTACGATGGTCACTCC +
Preference number: 6 (lower is better)
Translates to: SCWRGRLWKYTE*HWLLCFYDGHS
Trigger: GGAGTGACCATCGTAAAAACACAATAGCCAGTGCCACTCTGTGTACTTCCATAGTCGACCGCGCCAGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS CAA 72 bp GACTTAGTGCTTCTCTGTGCATTCCCTGCCGAGAGCTaGTGTTTACCCAGTGAGGATGGACTAGCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: DLVLLCAFPAES*CLPSEDGLAAS
Trigger: GGAAGCAGCTAGTCCATCCTCACTGGGTAAACACAAGCTCTCGGCAGGGAATGCACAGAGAAGCACTAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CAA 72 bp ACCGCCTTCCACAAGACGTTGTTAGGCGCACTTTCTTaGGGAACTCAGCCCAGATGTGGAAACTGTGCTCTG +
Preference number: 6 (lower is better)
Translates to: TAFHKTLLGALS*GTQPRCGNCAL
Trigger: CAGAGCACAGTTTCCACATCTGGGCTGAGTTCCCAAAGAAAGTGCGCCTAACAACGTCTTGTGGAAGGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS TCA 72 bp AACTCCTGGGATGGGAAAAAGAAGCACGCTGACGGGTaGGCCACTTGCTGTCAAGAATGTTCAAACCTGACG +
Preference number: 6 (lower is better)
Translates to: NSWDGKKKHADG*ATCCQECSNLT
Trigger: CGTCAGGTTTGAACATTCTTGACAGCAAGTGGCTCACCCGTCAGCGTGCTTCTTTTTCCCATCCCAGGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS GCA 72 bp GCATCTACACAAATATCAGCCTGCAAGCTGGACAGCTaGCACGGCTCTCGGTTCATATCTTTCTATGGTCCG +
Preference number: 6 (lower is better)
Translates to: ASTQISACKLDS*HGSRFISFYGP
Trigger: CGGACCATAGAAAGATATGAACCGAGAGCCGTGGCAGCTGTCCAGCTTGCAGGCTGATATTTGTGTAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 72 bp GTTAGGCGCACTTTCTTTGGGAACTCAGCCCAGATGTaGAAACTGTGCTCTGCAGAGTTAACTGTTCCTGGG +
Preference number: 6 (lower is better)
Translates to: VRRTFFGNSAQM*KLCSAELTVPG
Trigger: CCCAGGAACAGTTAACTCTGCAGAGCACAGTTTCCACATCTGGGCTGAGTTCCCAAAGAAAGTGCGCCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 72 bp GTACACAGAGTGGCACTGGCTATTGTGTTTTTACGATaGTCACTCCCTGGATGGCCTGCAGGTCCACTTTTG +
Preference number: 6 (lower is better)
Translates to: VHRVALAIVFLR*SLPGWPAGPLL
Trigger: CAAAAGTGGACCTGCAGGCCATCCAGGGAGTGACCATCGTAAAAACACAATAGCCAGTGCCACTCTGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486546.1
CDS CAA 72 bp TTACTTCTCTTGACGCCAACCGCCTTCCACAAGACGTaGTTAGGCGCACTTTCTTTGGGAACTCAGCCCAGA +
Preference number: 6 (lower is better)
Translates to: LLLLTPTAFHKT*LGALSLGTQPR
Trigger: TCTGGGCTGAGTTCCCAAAGAAAGTGCGCCTAACAACGTCTTGTGGAAGGCGGTTGGCGTCAAGAGAAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CAA 90 bp CTGAACACTTTACTTCTCTTGACGCCAACCGCCTTCCACAAGACGTaGTTAGGCGCACTTTCTTTGGGAACTCAGCCCAGATGTGGAAAC +
Preference number: 6 (lower is better)
Translates to: LNTLLLLTPTAFHKT*LGALSLGTQPRCGN
Trigger: GTTTCCACATCTGGGCTGAGTTCCCAAAGAAAGTGCGCCTAACAACGTCTTGTGGAAGGCGGTTGGCGTCAAGAGAAGTAAAGTGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS TCA 72 bp CAAGTCCAACTCCTGGGATGGGAAAAAGAAGCACGCTaGCGGGTGAGCCACTTGCTGTCAAGAATGTTCAAA +
Preference number: 6 (lower is better)
Translates to: QVQLLGWEKEAR*RVSHLLSRMFK
Trigger: TTTGAACATTCTTGACAGCAAGTGGCTCACCCGTCAGCGTGCTTCTTTTTCCCATCCCAGGAGTTGGACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403952.3
CDS GCA 72 bp TGTGTTATCTGCATGGCATCTACACAAATATCAGCCTaGAAGCTGGACAGCTGCCACGGCTCTCGGTTCATA +
Preference number: 6 (lower is better)
Translates to: CVICMASTQISA*KLDSCHGSRFI
Trigger: TATGAACCGAGAGCCGTGGCAGCTGTCCAGCTTGCAGGCTGATATTTGTGTAGATGCCATGCAGATAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 72 bp GGACAGCTGCCACGGCTCTCGGTTCATATCTTTCTATaGTCCGTTCTAAGCCCTGAAGTCTTTGAAGACAAG +
Preference number: 6 (lower is better)
Translates to: GQLPRLSVHIFL*SVLSPEVFEDK
Trigger: CTTGTCTTCAAAGACTTCAGGGCTTAGAACGGACCATAGAAAGATATGAACCGAGAGCCGTGGCAGCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CCA 72 bp TCTGCATGGCATCTACACAAATATCAGCCTGCAAGCTaGACAGCTGCCACGGCTCTCGGTTCATATCTTTCT +
Preference number: 6 (lower is better)
Translates to: SAWHLHKYQPAS*TAATALGSYLS
Trigger: AGAAAGATATGAACCGAGAGCCGTGGCAGCTGTCCAGCTTGCAGGCTGATATTTGTGTAGATGCCATGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491496.1
CDS CAA 72 bp GGATCCGTCATGCCGCCCGAGGTTTTTAAGAACGTGTaGATAATACGGCATGAGATCAGTCGCGTCATCTTC +
Preference number: 6 (lower is better)
Translates to: GSVMPPEVFKNV*IIRHEISRVIF
Trigger: GAAGATGACGCGACTGATCTCATGCCGTATTATCAACACGTTCTTAAAAACCTCGGGCGGCATGACGGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS CAA 90 bp AGTTTCTCTGGATCCGTCATGCCGCCCGAGGTTTTTAAGAACGTGTaGATAATACGGCATGAGATCAGTCGCGTCATCTTCGAATCCTCC +
Preference number: 6 (lower is better)
Translates to: SFSGSVMPPEVFKNV*IIRHEISRVIFESS
Trigger: GGAGGATTCGAAGATGACGCGACTGATCTCATGCCGTATTATCAACACGTTCTTAAAAACCTCGGGCGGCATGACGGATCCAGAGAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297440.11
ENST00000403952.3
ENST00000440747.5
CDS CCA 72 bp CTGGCTATTGTGTTTTTACGATGGTCACTCCCTGGATaGCCTGCAGGTCCACTTTTGTACCAGTTTAGGGTT +
Preference number: 6 (lower is better)
Translates to: LAIVFLRWSLPG*PAGPLLYQFRV
Trigger: AACCCTAAACTGGTACAAAAGTGGACCTGCAGGCCATCCAGGGAGTGACCATCGTAAAAACACAATAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486546.1