RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAAF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000167646

Ensembl transcript IDs: ENST00000391720.8, ENST00000455045.5, ENST00000524407.7, ENST00000526003.5, ENST00000527166.1, ENST00000527223.6, ENST00000527292.5, ENST00000528412.5, ENST00000528476.1, ENST00000532817.5, ENST00000533527.6, ENST00000534170.5, ENST00000534214.1, ENST00000586877.1, ENST00000587789.2, ENST00000588076.1

Found 523 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCAGGCGGTCGGGCTCGGGGACCAGGTGCGCCAGCAGGTCGGCCTaGGCACGCACGAAGGCGGCCACTGGCGGGCGCAGCAGCGCGTTC +
Preference number: 1 (lower is better)
Translates to: SRRSGSGTRCASRSA*ARTKAATGGRSSAF
Trigger: GAACGCGCTGCTGCGCCCGCCAGTGGCCGCCTTCGTGCGTGCCCAGGCCGACCTGCTGGCGCACCTGGTCCCCGAGCCCGACCGCCTGGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR GCA 90 bp AGCCAGGGCAGCTGTTCCTCCAGGCGGTCGGGCTCGGGGACCAGGTaGGCCAGCAGGTCGGCCTGGGCACGCACGAAGGCGGCCACTGGC +
Preference number: 1 (lower is better)
Translates to: SQGSCSSRRSGSGTR*ASRSAWARTKAATG
Trigger: GCCAGTGGCCGCCTTCGTGCGTGCCCAGGCCGACCTGCTGGCGCACCTGGTCCCCGAGCCCGACCGCCTGGAGGAACAGCTGCCCTGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR CCA 90 bp CAGGTGCGCCAGCAGGTCGGCCTGGGCACGCACGAAGGCGGCCACTaGCGGGCGCAGCAGCGCGTTCCCCCACACTTCCAGGAAGGTCTC +
Preference number: 1 (lower is better)
Translates to: QVRQQVGLGTHEGGH*RAQQRVPPHFQEGL
Trigger: GAGACCTTCCTGGAAGTGTGGGGGAACGCGCTGCTGCGCCCGCCAGTGGCCGCCTTCGTGCGTGCCCAGGCCGACCTGCTGGCGCACCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR CCA 90 bp GGGAGCCCAGGTAGTGGCGCAGGCGCGAGTCCCAGAGGCGGCTCATaGGGAACGCCTGGGGCCCTTTCTCGCCGCCAGCCCAGAAGCGGA +
Preference number: 1 (lower is better)
Translates to: GSPGSGAGASPRGGS*GTPGALSRRQPRSG
Trigger: TCCGCTTCTGGGCTGGCGGCGAGAAAGGGCCCCAGGCGTTCCCCATGAGCCGCCTCTGGGACTCGCGCCTGCGCCACTACCTGGGCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR TCA 90 bp CTTGAGCCCCGCGGTCATGCAGCTTCATGCGCAGGTCCCAGTCGCTaGCACCGCGCCGGGCGTCGTAGCGGGAGCCCAGGTAGTGGCGCA +
Preference number: 1 (lower is better)
Translates to: LEPRGHAASCAGPSR*HRAGRRSGSPGSGA
Trigger: TGCGCCACTACCTGGGCTCCCGCTACGACGCCCGGCGCGGTGTCAGCGACTGGGACCTGCGCATGAAGCTGCATGACCGCGGGGCTCAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR CCA 90 bp GGCTGGGTCAGGCCCTCAAGGGCTGGGTTGCTGGCTTCAAGAGGCTaGGCCAGGATGTCAAGGGGCGGAGTTCCGGGTTCCACAGCTGGG +
Preference number: 1 (lower is better)
Translates to: GWVRPSRAGLLASRG*ARMSRGGVPGSTAG
Trigger: CCCAGCTGTGGAACCCGGAACTCCGCCCCTTGACATCCTGGCCCAGCCTCTTGAAGCCAGCAACCCAGCCCTTGAGGGCCTGACCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR TCA 90 bp CGGACGCCAGGGTCCGGTTGGGCACATGATAGGCGCTGGAGTCCCTaGGTTCAAAGGCGACGCCTGTGTCCCGCCAGCGTCGGAACTCCT +
Preference number: 1 (lower is better)
Translates to: RTPGSGWAHDRRWSP*VQRRRLCPASVGTP
Trigger: AGGAGTTCCGACGCTGGCGGGACACAGGCGTCGCCTTTGAACTCAGGGACTCCAGCGCCTATCATGTGCCCAACCGGACCCTGGCGTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR CCA 90 bp GTTCCGGGTTCCACAGCTGGGACAGTGTTGCCCAGAGCTGATTCCTaGGACTTGCAGAAACGTGCGAAGGTCTCTGAAGGCCTGGCCCCG +
Preference number: 1 (lower is better)
Translates to: VPGSTAGTVLPRADS*DLQKRAKVSEGLAP
Trigger: CGGGGCCAGGCCTTCAGAGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACTGTCCCAGCTGTGGAACCCGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR GCA 90 bp GTTCCACAGCTGGGACAGTGTTGCCCAGAGCTGATTCCTGGGACTTaGAGAAACGTGCGAAGGTCTCTGAAGGCCTGGCCCCGGTCTGTG +
Preference number: 1 (lower is better)
Translates to: VPQLGQCCPELIPGT*RNVRRSLKAWPRSV
Trigger: CACAGACCGGGGCCAGGCCTTCAGAGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACTGTCCCAGCTGTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR CCA 90 bp CTGATTCCTGGGACTTGCAGAAACGTGCGAAGGTCTCTGAAGGCCTaGCCCCGGTCTGTGGAGCAAATCCAGCTGCCTGAGCTAGCTCCC +
Preference number: 1 (lower is better)
Translates to: LIPGTCRNVRRSLKA*PRSVEQIQLPELAP
Trigger: GGGAGCTAGCTCAGGCAGCTGGATTTGCTCCACAGACCGGGGCCAGGCCTTCAGAGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR GCA 90 bp GGATGTCAAGGGGCGGAGTTCCGGGTTCCACAGCTGGGACAGTGTTaGCCAGAGCTGATTCCTGGGACTTGCAGAAACGTGCGAAGGTCT +
Preference number: 1 (lower is better)
Translates to: GCQGAEFRVPQLGQC*PELIPGTCRNVRRS
Trigger: AGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACTGTCCCAGCTGTGGAACCCGGAACTCCGCCCCTTGACATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR TCA 90 bp TTCGCTCTTGCAGCCCCATCTTCTCCGGTTCCTCCAGGGCTAGGCTaGAGATCAGCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCA +
Preference number: 1 (lower is better)
Translates to: FALAAPSSPVPPGLG*RSACVGPQLPDYSP
Trigger: TGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGATCTTCAGCCTAGCCCTGGAGGAACCGGAGAAGATGGGGCTGCAAGAGCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528412.5
ENST00000534214.1
3UTR CCA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATaGTATCAGCGGGTTCTCATCCTACAACCTGACTTTGGAAGTTGG +
Preference number: 1 (lower is better)
Translates to: GMIRIKLRTLAADLE*YQRVLILQPDFGSW
Trigger: CCAACTTCCAAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
3UTR CAA 90 bp GCGCCCCCAGGCGGCCACGTCGCGGAGCAGCTCCGTCACGTTGTGTaGAGTGATCTCCCCGGCCGTCTTGACTGGCTGGCCGTTGCTCGT +
Preference number: 2 (lower is better)
Translates to: APPGGHVAEQLRHVV*SDLPGRLDWLAVAR
Trigger: ACGAGCAACGGCCAGCCAGTCAAGACGGCCGGGGAGATCACTCAACACAACGTGACGGAGCTGCTCCGCGACGTGGCCGCCTGGGGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR-3UTR CCA 90 bp TCTCGCCGCCAGCCCAGAAGCGGAATACGGCCTCCAGGGCATCCCGCTCGCGGACTCCCGGGGTGGGGGTaGCGGGTACTGAGTGGGAAT +
Preference number: 2 (lower is better)
Translates to: SRRQPRSGIRPPGHPARGLPGWG*RVLSGN
Trigger: ATTCCCACTCAGTACCCGCCACCCCCACCCCGGGAG...TCCGCGAGCGGGATGCCCTGGAGGCCGTATTCCGCTTCTGGGCTGGCGGCGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR-3UTR CCA 90 bp ACCGGACGCCAGGGTCCGGTTGGGCACATGATAGGCGCTGGAGTCCCTGAGTTCCTCATGGGGAACGCCTaGGGCCCTTTCTCGCCGCCA +
Preference number: 2 (lower is better)
Translates to: TGRQGPVGHMIGAGVPEFLMGNA*GPFSPP
Trigger: TGGCGGCGAGAAAGGGCCCCAGGCGTTCCCCATGAG...GAACTCAGGGACTCCAGCGCCTATCATGTGCCCAACCGGACCCTGGCGTCCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR-3UTR CCA 90 bp GTCCCTGAGTTCAAAGGCGACGCCTGTGTCCCGCCAGCGTCGGAACTCCTGGGGCAGCCACAGGGTGCCTaGGAACAAGGGGGCCAAAGT +
Preference number: 2 (lower is better)
Translates to: VPEFKGDACVPPASELLGQPQGA*EQGGQS
Trigger: ACTTTGGCCCCCTTGTTCCCAGGCACCCTGTGGCTG...CCCCAGGAGTTCCGACGCTGGCGGGACACAGGCGTCGCCTTTGAACTCAGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR-3UTR CCA 90 bp AAACGTGCGAAGGTCTCTGAAGGCCTGGCCCCGGTCTGTGGAGCAAATCCAGCTCCCGGCCGTCTTGACTaGCTGGCCGTTGCTCGTCCG +
Preference number: 2 (lower is better)
Translates to: KRAKVSEGLAPVCGANPAPGRLD*LAVARP
Trigger: CGGACGAGCAACGGCCAGCCAGTCAAGACGGCCGGG...AGCTGGATTTGCTCCACAGACCGGGGCCAGGCCTTCAGAGACCTTCGCACGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR-3UTR GCA 90 bp GAGTTCCGGGTTCCACAGCTGGGACAGTGTTGCCCAGAGCTGATTCCTGGGACTCGGGTGTTGAATCCCTaGAGCTGCTCCTGCCGCACG +
Preference number: 2 (lower is better)
Translates to: EFRVPQLGQCCPELIPGTRVLNP*SCSCRT
Trigger: CGTGCGGCAGGAGCAGCTGCAGGGATTCAACACCCG...AGTCCCAGGAATCAGCTCTGGGCAACACTGTCCCAGCTGTGGAACCCGGAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR CAA 90 bp GGTTCCACAGCTGGGACAGTGTTGCCCAGAGCTGATTCCTGGGACTaGCAGAAACGTGCGAAGGTCTCTGAAGGCCTGGCCCCGGTCTGT +
Preference number: 2 (lower is better)
Translates to: GSTAGTVLPRADSWD*QKRAKVSEGLAPVC
Trigger: ACAGACCGGGGCCAGGCCTTCAGAGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACTGTCCCAGCTGTGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR-3UTR TCA 90 bp GAGTTCCGGGTTCCACAGCTGGGACAGTGTTGCCCAGAGCTGATTCCTGGGACTCCTCCAGGGCTAGGCTaGAGATCAGCATGTGTCGGG +
Preference number: 2 (lower is better)
Translates to: EFRVPQLGQCCPELIPGTPPGLG*RSACVG
Trigger: CCCGACACATGCTGATCTTCAGCCTAGCCCTGGAGG...AGTCCCAGGAATCAGCTCTGGGCAACACTGTCCCAGCTGTGGAACCCGGAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR-3UTR TCA 90 bp TCTCGCCGCCAGCCCAGAAGCGGAATACGGCCTCCAGGGCATCCCGCTCGCGGACTCAGAAATGGAATTTaGAAGTCTACCAACACTCCC +
Preference number: 2 (lower is better)
Translates to: SRRQPRSGIRPPGHPARGLRNGI*KSTNTP
Trigger: GGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAG...TCCGCGAGCGGGATGCCCTGGAGGCCGTATTCCGCTTCTGGGCTGGCGGCGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR-3UTR TCA 90 bp TCGGCCGTTGTAGCAGCTCTTGTGGTGGAGAGTCTGAGCAGAATTGAGCGGCAGACTCCTGGGGGTGAATaGCTTGAGCCCCGCGGTCAT +
Preference number: 2 (lower is better)
Translates to: SAVVAALVVESLSRIERQTPGGE*LEPRGH
Trigger: ATGACCGCGGGGCTCAAGTCATTCACCCCCAGGAGT...CTGCCGCTCAATTCTGCTCAGACTCTCCACCACAAGAGCTGCTACAACGGCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR-3UTR GCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTGAATCCCTGCAGCTaGTCCTGCCGCACGTCCACC +
Preference number: 2 (lower is better)
Translates to: TLAADLEWYQRVLILQPDLNPCS*SCRTST
Trigger: GGTGGACGTGCGGCAGGAGCAGCTGCAGGGATTCAA...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR-3UTR CCA 90 bp TCCTACAACCTGACTTTGGAAGTTGGAGATAAGGGGTGTCTAGGGGTTGGGTCACAAGGGCTGGGTTGCTaGCTTCAAGAGGCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: SYNLTLEVGDKGCLGVGSQGLGC*LQEAGP
Trigger: TGGCCCAGCCTCTTGAAGCCAGCAACCCAGCCCTTG...TGACCCAACCCCTAGACACCCCTTATCTCCAACTTCCAAAGTCAGGTTGTAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR-3UTR TCA 90 bp TACCGGGCTAATTCCACAATCAAGTTCCCTCCGGGTGCCACACAGGCCCCAAGCTCTCATCCTACAACCTaGCTTTGGAAGTTGGAGATA +
Preference number: 2 (lower is better)
Translates to: YRANSTIKFPPGATQAPSSHPTT*LWKLEI
Trigger: TATCTCCAACTTCCAAAGTCAGGTTGTAGGATGAGA...GCTTGGGGCCTGTGTGGCACCCGGAGGGAACTTGATTGTGGAATTAGCCCGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR-3UTR GCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCCAGTACCCGCGCGCTaGCACGCGCTCCCCACGGTA +
Preference number: 2 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYPVPAR*HALPTV
Trigger: TACCGTGGGGAGCGCGTGGCAGCGCGCGGGTACTGG...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR-3UTR TCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACGGGGGTGGCGGGTACTaGGTGGGAATGATTAGAATA +
Preference number: 2 (lower is better)
Translates to: TLAADLEWYQRVLILQPDGGGGY*VGMIRI
Trigger: TATTCTAATCATTCCCACTCAGTACCCGCCACCCCC...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
3UTR-3UTR TCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATACGTGCGAAGGTCTCTaGAGGCCTGGCCCCGGTCTG +
Preference number: 2 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYTCEGL*RPGPGL
Trigger: CAGACCGGGGCCAGGCCTTCAGAGACCTTCGCACGT...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR-3UTR TCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGTCTCATCCTACAACCTaGCTTTGGAAGTTGGAGATA +
Preference number: 2 (lower is better)
Translates to: RISEMEFESLPTLPGWGWSHPTT*LWKLEI
Trigger: TATCTCCAACTTCCAAAGTCAGGTTGTAGGATGAGA...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
3UTR-3UTR TCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTCTCATCCTACAACCTaGCTTTGGAAGTTGGAGATA +
Preference number: 2 (lower is better)
Translates to: TLAADLEWYQRVLILQPDSHPTT*LWKLEI
Trigger: TATCTCCAACTTCCAAAGTCAGGTTGTAGGATGAGA...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
3UTR-3UTR CCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATGCAGCGGACTTAGAATaGTATCAGCGGGTTCTCATC +
Preference number: 2 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYAADLE*YQRVLI
Trigger: GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGC...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
3UTR-3UTR TCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGTCTCATCCTACAACCTaGCTTTGGAAGTTGGAGATA +
Preference number: 2 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRSHPTT*LWKLEI
Trigger: TATCTCCAACTTCCAAAGTCAGGTTGTAGGATGAGA...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
3UTR-3UTR CCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCTCAGAAGTGGAATTTaGAATTCTGAGAGAACAATC +
Preference number: 2 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYLRSGI*NSERTI
Trigger: GATTGTTCTCTCAGAATTCCAAATTCCACTTCTGAG...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
3UTR CCA 72 bp TCGGGCTCGGGGACCAGGTGCGCCAGCAGGTCGGCCTaGGCACGCACGAAGGCGGCCACTGGCGGGCGCAGC +
Preference number: 3 (lower is better)
Translates to: SGSGTRCASRSA*ARTKAATGGRS
Trigger: GCTGCGCCCGCCAGTGGCCGCCTTCGTGCGTGCCCAGGCCGACCTGCTGGCGCACCTGGTCCCCGAGCCCGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR GCA 72 bp AGCTGTTCCTCCAGGCGGTCGGGCTCGGGGACCAGGTaGGCCAGCAGGTCGGCCTGGGCACGCACGAAGGCG +
Preference number: 3 (lower is better)
Translates to: SCSSRRSGSGTR*ASRSAWARTKA
Trigger: CGCCTTCGTGCGTGCCCAGGCCGACCTGCTGGCGCACCTGGTCCCCGAGCCCGACCGCCTGGAGGAACAGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR CCA 72 bp CAGCAGGTCGGCCTGGGCACGCACGAAGGCGGCCACTaGCGGGCGCAGCAGCGCGTTCCCCCACACTTCCAG +
Preference number: 3 (lower is better)
Translates to: QQVGLGTHEGGH*RAQQRVPPHFQ
Trigger: CTGGAAGTGTGGGGGAACGCGCTGCTGCGCCCGCCAGTGGCCGCCTTCGTGCGTGCCCAGGCCGACCTGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR CCA 72 bp GGTAGTGGCGCAGGCGCGAGTCCCAGAGGCGGCTCATaGGGAACGCCTGGGGCCCTTTCTCGCCGCCAGCCC +
Preference number: 3 (lower is better)
Translates to: GSGAGASPRGGS*GTPGALSRRQP
Trigger: GGGCTGGCGGCGAGAAAGGGCCCCAGGCGTTCCCCATGAGCCGCCTCTGGGACTCGCGCCTGCGCCACTACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR TCA 72 bp CGCGGTCATGCAGCTTCATGCGCAGGTCCCAGTCGCTaGCACCGCGCCGGGCGTCGTAGCGGGAGCCCAGGT +
Preference number: 3 (lower is better)
Translates to: RGHAASCAGPSR*HRAGRRSGSPG
Trigger: ACCTGGGCTCCCGCTACGACGCCCGGCGCGGTGTCAGCGACTGGGACCTGCGCATGAAGCTGCATGACCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR GCA 72 bp TGCTCGTCCGCAGGAGGCTCTCGTCGTCCGCTTCGATaGCGAAGGCCACGAAGGGCCCCGTGGCGATGTCCC +
Preference number: 3 (lower is better)
Translates to: CSSAGGSRRPLR*RRPRRAPWRCP
Trigger: GGGACATCGCCACGGGGCCCTTCGTGGCCTTCGGCATCGAAGCGGACGACGAGAGCCTCCTGCGGACGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR CCA 72 bp AGGCGCGAGTCCCAGAGGCGGCTCATGGGGAACGCCTaGGGCCCTTTCTCGCCGCCAGCCCAGAAGCGGAAT +
Preference number: 3 (lower is better)
Translates to: RRESQRRLMGNA*GPFSPPAQKRN
Trigger: ATTCCGCTTCTGGGCTGGCGGCGAGAAAGGGCCCCAGGCGTTCCCCATGAGCCGCCTCTGGGACTCGCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR TCA 72 bp GCGGCCACGTCGCGGAGCAGCTCCGTCACGTTGTGTTaGGTGATCTCCCCGGCCGTCTTGACTGGCTGGCCG +
Preference number: 3 (lower is better)
Translates to: AATSRSSSVTLC*VISPAVLTGWP
Trigger: CGGCCAGCCAGTCAAGACGGCCGGGGAGATCACTCAACACAACGTGACGGAGCTGCTCCGCGACGTGGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR CCA 72 bp CAGGGCTCACAGTGTGGGGTCCCACCCTGCAGAGGCTaGGTCAGGCCCTCAAGGGCTGGGTTGCTGGCTTCA +
Preference number: 3 (lower is better)
Translates to: QGSQCGVPPCRG*VRPSRAGLLAS
Trigger: TGAAGCCAGCAACCCAGCCCTTGAGGGCCTGACCCAGCCTCTGCAGGGTGGGACCCCACACTGTGAGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR TCA 72 bp GGGTCCGGTTGGGCACATGATAGGCGCTGGAGTCCCTaGGTTCAAAGGCGACGCCTGTGTCCCGCCAGCGTC +
Preference number: 3 (lower is better)
Translates to: GSGWAHDRRWSP*VQRRRLCPASV
Trigger: GACGCTGGCGGGACACAGGCGTCGCCTTTGAACTCAGGGACTCCAGCGCCTATCATGTGCCCAACCGGACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR GCA 72 bp GCTAGCTCCCTGACCCGGGTGTTGAATCCCTGCAGCTaGTCCTGCCGCACGTCCACCAGGTACCGGGCTAAT +
Preference number: 3 (lower is better)
Translates to: ASSLTRVLNPCS*SCRTSTRYRAN
Trigger: ATTAGCCCGGTACCTGGTGGACGTGCGGCAGGAGCAGCTGCAGGGATTCAACACCCGGGTCAGGGAGCTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR-3UTR CAA 90 bp CCTGCCGCACGTCCACCAGGTACCGGGCTAATTCCACAATCAAGTTCCCTCCGGGGTCTCGCTTCGCTCTaGCAGCCCCATCTTCTCCGG +
Preference number: 3 (lower is better)
Translates to: PAARPPGTGLIPQSSSLRGLASL*QPHLLR
Trigger: CCGGAGAAGATGGGGCTGCAAGAGCGAAGCGAGACC...CCGGAGGGAACTTGATTGTGGAATTAGCCCGGTACCTGGTGGACGTGCGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR GCA 72 bp TCCCTGACCCGGGTGTTGAATCCCTGCAGCTGCTCCTaGCGCACGTCCACCAGGTACCGGGCTAATTCCACA +
Preference number: 3 (lower is better)
Translates to: SLTRVLNPCSCS*RTSTRYRANST
Trigger: TGTGGAATTAGCCCGGTACCTGGTGGACGTGCGGCAGGAGCAGCTGCAGGGATTCAACACCCGGGTCAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR GCA 72 bp GGGGCGGAGTTCCGGGTTCCACAGCTGGGACAGTGTTaGCCAGAGCTGATTCCTGGGACTTGCAGAAACGTG +
Preference number: 3 (lower is better)
Translates to: GAEFRVPQLGQC*PELIPGTCRNV
Trigger: CACGTTTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACTGTCCCAGCTGTGGAACCCGGAACTCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR CCA 72 bp GGGACTTGCAGAAACGTGCGAAGGTCTCTGAAGGCCTaGCCCCGGTCTGTGGAGCAAATCCAGCTGCCTGAG +
Preference number: 3 (lower is better)
Translates to: GTCRNVRRSLKA*PRSVEQIQLPE
Trigger: CTCAGGCAGCTGGATTTGCTCCACAGACCGGGGCCAGGCCTTCAGAGACCTTCGCACGTTTCTGCAAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR-3UTR CAA 90 bp AAACGTGCGAAGGTCTCTGAAGGCCTGGCCCCGGTCTGTGGAGCAAATCCAGCTCTCCGTCACGTTGTGTaGAGTGATCTCCCCGGCCGT +
Preference number: 3 (lower is better)
Translates to: KRAKVSEGLAPVCGANPALRHVV*SDLPGR
Trigger: ACGGCCGGGGAGATCACTCAACACAACGTGACGGAG...AGCTGGATTTGCTCCACAGACCGGGGCCAGGCCTTCAGAGACCTTCGCACGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR TCA 72 bp GGGTGCCTGGGAACAAGGGGGCCAAAGTCAAGGGCCTaGGACTCAGTGTCAGATCCTAGGCTGGGCTTAGAG +
Preference number: 3 (lower is better)
Translates to: GCLGTRGPKSRA*DSVSDPRLGLE
Trigger: CTCTAAGCCCAGCCTAGGATCTGACACTGAGTCTCAGGCCCTTGACTTTGGCCCCCTTGTTCCCAGGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
3UTR GCA 72 bp CTGGGACAGTGTTGCCCAGAGCTGATTCCTGGGACTTaGAGAAACGTGCGAAGGTCTCTGAAGGCCTGGCCC +
Preference number: 3 (lower is better)
Translates to: LGQCCPELIPGT*RNVRRSLKAWP
Trigger: GGGCCAGGCCTTCAGAGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACTGTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR TCA 72 bp TCCGGGTTCCACAGCTGGGACAGTGTTGCCCAGAGCTaGTTCCTGGGACTTGCAGAAACGTGCGAAGGTCTC +
Preference number: 3 (lower is better)
Translates to: SGFHSWDSVAQS*FLGLAETCEGL
Trigger: GAGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACTGTCCCAGCTGTGGAACCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR CCA 72 bp TCCACAGCTGGGACAGTGTTGCCCAGAGCTGATTCCTaGGACTTGCAGAAACGTGCGAAGGTCTCTGAAGGC +
Preference number: 3 (lower is better)
Translates to: STAGTVLPRADS*DLQKRAKVSEG
Trigger: GCCTTCAGAGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACTGTCCCAGCTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR-3UTR CAA 90 bp TCGGCCGTTGTAGCAGCTCTTGTGGTGGAGAGTCTGAGCAGAATTGAGCGGCAGTCCTACAACCTGACTTaGGAAGTTGGAGATAAGGGG +
Preference number: 3 (lower is better)
Translates to: SAVVAALVVESLSRIERQSYNLT*EVGDKG
Trigger: CCCCTTATCTCCAACTTCCAAAGTCAGGTTGTAGGA...CTGCCGCTCAATTCTGCTCAGACTCTCCACCACAAGAGCTGCTACAACGGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR-3UTR CAA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACTCCTACAACCTGACTTaGGAAGTTGGAGATAAGGGG +
Preference number: 3 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYSYNLT*EVGDKG
Trigger: CCCCTTATCTCCAACTTCCAAAGTCAGGTTGTAGGA...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
3UTR-3UTR CAA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGTCCTACAACCTGACTTaGGAAGTTGGAGATAAGGGG +
Preference number: 3 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRSYNLT*EVGDKG
Trigger: CCCCTTATCTCCAACTTCCAAAGTCAGGTTGTAGGA...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
3UTR CCA 72 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATaGTATCAGCGGGTTCTCATCCTACAACCTGACTTT +
Preference number: 3 (lower is better)
Translates to: RIKLRTLAADLE*YQRVLILQPDF
Trigger: AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
3UTR-3UTR CAA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATTCCTACAACCTGACTTaGGAAGTTGGAGATAAGGGG +
Preference number: 3 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYSYNLT*EVGDKG
Trigger: CCCCTTATCTCCAACTTCCAAAGTCAGGTTGTAGGA...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
3UTR-3UTR CAA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATATGATTAGAATAAAATaGAGGACTCTAGCAGCGGAC +
Preference number: 3 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYMIRIK*RTLAAD
Trigger: GTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp CGGGGACCAGGTGCGCCAGCAGGTCGGCCTGGGCACGCACGAAGGCGGCCACTGCGTCGTCCGCTTCGATaGCGAAGGCCACGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: RGPGAPAGRPGHARRRPLRRPLR*RRPRRA
Trigger: GGCCCTTCGTGGCCTTCGGCATCGAAGCGGACGACG...CAGTGGCCGCCTTCGTGCGTGCCCAGGCCGACCTGCTGGCGCACCTGGTCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR GCA 90 bp GGCCCTTTCTCGCCGCCAGCCCAGAAGCGGAATACGGCCTCCAGGGCATCCCGCCTTCCCTCCGCGTGCTaGTGCTCCTCCAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: GPFSPPAQKRNTASRASRLPSAC*CSSRSP
Trigger: GGGGGACCTGGAGGAGCAGCAGCACGCGGAGGGAAG...GCGGGATGCCCTGGAGGCCGTATTCCGCTTCTGGGCTGGCGGCGAGAAAGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp GAAGGCGGCCACTGGCGGGCGCAGCAGCGCGTTCCCCCACACTTCCAGGAAGGTCCAACACTCCCGGGGTaGGGGTGGCGGGTACTGAGT +
Preference number: 4 (lower is better)
Translates to: EGGHWRAQQRVPPHFQEGPTLPG*GWRVLS
Trigger: ACTCAGTACCCGCCACCCCCACCCCGGGAGTGTTGG...ACCTTCCTGGAAGTGTGGGGGAACGCGCTGCTGCGCCCGCCAGTGGCCGCCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR GCA 90 bp GCGGAGGCTGAGCCAGGGCAGCTGTTCCTCCAGGCGGTCGGGCTCGGGGACCAGCAGCTGGGACAGTGTTaGCCAGAGCTGATTCCTGGG +
Preference number: 4 (lower is better)
Translates to: AEAEPGQLFLQAVGLGDQQLGQC*PELIPG
Trigger: CCCAGGAATCAGCTCTGGGCAACACTGTCCCAGCTG...CTGGTCCCCGAGCCCGACCGCCTGGAGGAACAGCTGCCCTGGCTCAGCCTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR GCA 90 bp AGGCTGAGCCAGGGCAGCTGTTCCTCCAGGCGGTCGGGCTCGGGGACCAGGTGCCCTCAAGGGCTGGGTTaGTGGCTTCAAGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RLSQGSCSSRRSGSGTRCPQGLG*WLQEAG
Trigger: CCCAGCCTCTTGAAGCCAGCAACCCAGCCCTTGAGG...GCACCTGGTCCCCGAGCCCGACCGCCTGGAGGAACAGCTGCCCTGGCTCAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR CAA 72 bp GGCGGCCACGTCGCGGAGCAGCTCCGTCACGTTGTGTaGAGTGATCTCCCCGGCCGTCTTGACTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GGHVAEQLRHVV*SDLPGRLDWLA
Trigger: GGCCAGCCAGTCAAGACGGCCGGGGAGATCACTCAACACAACGTGACGGAGCTGCTCCGCGACGTGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR GCA 90 bp GACTTGCAGAAACGTGCGAAGGTCTCTGAAGGCCTGGCCCCGGTCTGTGGAGCACGGAGCCGAAGCCGCTaGCGGAGCCGGCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: DLQKRAKVSEGLAPVCGARSRSR*RSRQVW
Trigger: CCACACCTGCCGGCTCCGGCAGCGGCTTCGGCTCCG...TGCTCCACAGACCGGGGCCAGGCCTTCAGAGACCTTCGCACGTTTCTGCAAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR TCA 90 bp TACCGGGCTAATTCCACAATCAAGTTCCCTCCGGGTGCCACACAGGCCCCAAGCGCAGGTCCCAGTCGCTaGCACCGCGCCGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: YRANSTIKFPPGATQAPSAGPSR*HRAGRR
Trigger: ACGACGCCCGGCGCGGTGTCAGCGACTGGGACCTGC...GCTTGGGGCCTGTGTGGCACCCGGAGGGAACTTGATTGTGGAATTAGCCCGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp GTTCCCCCACACTTCCAGGAAGGTCTCGCTTCGCTCTTGCAGCCCCATCTTCTCGCCAGCAGGTCGGCCTaGGCACGCACGAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: VPPHFQEGLASLLQPHLLASRSA*ARTKAA
Trigger: GGCCGCCTTCGTGCGTGCCCAGGCCGACCTGCTGGC...GAGAAGATGGGGCTGCAAGAGCGAAGCGAGACCTTCCTGGAAGTGTGGGGGAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR TCA 90 bp AAGCGGAATACGGCCTCCAGGGCATCCCGCTCGCGGAACTTGAGGGCGCGGAGGGAGTCTGAGCAGAATTaGGCGGCAGGAAGTGGACGG +
Preference number: 4 (lower is better)
Translates to: KRNTASRASRSRNLRARRESEQN*AAGSGR
Trigger: CCGTCCACTTCCTGCCGCTCAATTCTGCTCAGACTC...CCTCCGCGCCCTCAAGTTCCGCGAGCGGGATGCCCTGGAGGCCGTATTCCGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR GCA 90 bp GAGTTCCGGGTTCCACAGCTGGGACAGTGTTGCCCAGAGCTGATTCCTGGGACTCCAGTACCCGCGCGCTaGCACGCGCTCCCCACGGTA +
Preference number: 4 (lower is better)
Translates to: EFRVPQLGQCCPELIPGTPVPAR*HALPTV
Trigger: TACCGTGGGGAGCGCGTGGCAGCGCGCGGGTACTGG...AGTCCCAGGAATCAGCTCTGGGCAACACTGTCCCAGCTGTGGAACCCGGAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp GTCCCTGAGTTCAAAGGCGACGCCTGTGTCCCGCCAGCGTCGGAACTCCTGGGGCAGGCCCTCAAGGGCTaGGTTGCTGGCTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: VPEFKGDACVPPASELLGQALKG*VAGFKR
Trigger: CCTCTTGAAGCCAGCAACCCAGCCCTTGAGGGCCTG...CCCCAGGAGTTCCGACGCTGGCGGGACACAGGCGTCGCCTTTGAACTCAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp GGCACGCACGAAGGCGGCCACTGGCGGGCGCAGCAGCGCGTTCCCCCACACTTCGCAGCGGACTTAGAATaGTATCAGCGGGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: GTHEGGHWRAQQRVPPHFAADLE*YQRVLI
Trigger: GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGC...GAAGTGTGGGGGAACGCGCTGCTGCGCCCGCCAGTGGCCGCCTTCGTGCGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp GGCACGCACGAAGGCGGCCACTGGCGGGCGCAGCAGCGCGTTCCCCCACACTTCAAGGACTCGGGAATCTaGGCTCTCATCTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: GTHEGGHWRAQQRVPPHFKDSGI*ALIFIP
Trigger: TGGGATGAAGATGAGAGCCCAGATTCCCGAGTCCTT...GAAGTGTGGGGGAACGCGCTGCTGCGCCCGCCAGTGGCCGCCTTCGTGCGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR GCA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACCGGAGCCGAAGCCGCTaGCGGAGCCGGCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYRSRSR*RSRQVW
Trigger: CCACACCTGCCGGCTCCGGCAGCGGCTTCGGCTCCG...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp CAGTGTTGCCCAGAGCTGATTCCTGGGACTTGCAGAAACGTGCGAAGGTCTCTGGGCTCGGGGACCAGGTaGGCCAGCAGGTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QCCPELIPGTCRNVRRSLGSGTR*ASRSAW
Trigger: CCAGGCCGACCTGCTGGCGCACCTGGTCCCCGAGCC...CAGAGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR GCA 90 bp GACTTGCAGAAACGTGCGAAGGTCTCTGAAGGCCTGGCCCCGGTCTGTGGAGCACCCTGCAGCTGCTCCTaGCGCACGTCCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: DLQKRAKVSEGLAPVCGAPCSCS*RTSTRY
Trigger: GTACCTGGTGGACGTGCGGCAGGAGCAGCTGCAGGG...TGCTCCACAGACCGGGGCCAGGCCTTCAGAGACCTTCGCACGTTTCTGCAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp CCTGCCGCACGTCCACCAGGTACCGGGCTAATTCCACAATCAAGTTCCCTCCGGCTCATGGGGAACGCCTaGGGCCCTTTCTCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: PAARPPGTGLIPQSSSLRLMGNA*GPFSPP
Trigger: TGGCGGCGAGAAAGGGCCCCAGGCGTTCCCCATGAG...CCGGAGGGAACTTGATTGTGGAATTAGCCCGGTACCTGGTGGACGTGCGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACCGGGGCTGGAGTCCCTaGCTCCGGGCTTCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYRGWSP*LRASLR
Trigger: GCGGAGGGAAGCCCGGAGCCAGGGACTCCAGCCCCG...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527223.6
ENST00000588076.1
CDS-3UTR GCA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACCCAGTACCCGCGCGCTaGCACGCGCTCCCCACGGTA +
Preference number: 4 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYPVPAR*HALPTV
Trigger: TACCGTGGGGAGCGCGTGGCAGCGCGCGGGTACTGG...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp CCCCACACTTCCAGGAAGGTCTCGCTTCGCTCTTGCAGCCCCATCTTCTCCGGTCGGGTGTTGAATCCCTaGAGCTGCTCCTGCCGCACG +
Preference number: 4 (lower is better)
Translates to: PHTSRKVSLRSCSPIFSGRVLNP*SCSCRT
Trigger: CGTGCGGCAGGAGCAGCTGCAGGGATTCAACACCCG...ACCGGAGAAGATGGGGCTGCAAGAGCGAAGCGAGACCTTCCTGGAAGTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp CCCCACACTTCCAGGAAGGTCTCGCTTCGCTCTTGCAGCCCCATCTTCTCCGGTCCTGGCCCCGGTCTGTaGAGCAAATCCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PHTSRKVSLRSCSPIFSGPGPGL*SKSSCL
Trigger: CAGGCAGCTGGATTTGCTCCACAGACCGGGGCCAGG...ACCGGAGAAGATGGGGCTGCAAGAGCGAAGCGAGACCTTCCTGGAAGTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR TCA 90 bp CCCCACACTTCCAGGAAGGTCTCGCTTCGCTCTTGCAGCCCCATCTTCTCCGGTCCTCCAGGGCTAGGCTaGAGATCAGCATGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: PHTSRKVSLRSCSPIFSGPPGLG*RSACVG
Trigger: CCCGACACATGCTGATCTTCAGCCTAGCCCTGGAGG...ACCGGAGAAGATGGGGCTGCAAGAGCGAAGCGAGACCTTCCTGGAAGTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR TCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCGCAGGTCCCAGTCGCTaGCACCGCGCCGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTAGPSR*HRAGRR
Trigger: ACGACGCCCGGCGCGGTGTCAGCGACTGGGACCTGC...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp GGTTCCTCCAGGGCTAGGCTGAAGATCAGCATGTGTCGGGCCACAGCTTCCAGAAGGCGCTGGAGTCCCTaGGTTCAAAGGCGACGCCTG +
Preference number: 4 (lower is better)
Translates to: GSSRARLKISMCRATASRRRWSP*VQRRRL
Trigger: CAGGCGTCGCCTTTGAACTCAGGGACTCCAGCGCCT...TCTGGAAGCTGTGGCCCGACACATGCTGATCTTCAGCCTAGCCCTGGAGGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR TCA 90 bp AAACGTGCGAAGGTCTCTGAAGGCCTGGCCCCGGTCTGTGGAGCAAATCCAGCTGAACCATCTGGGTGCTaGCCAGGCCCTGGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: KRAKVSEGLAPVCGANPAEPSGC*PGPGEE
Trigger: CTCCTCACCAGGGCCTGGTCAGCACCCAGATGGTTC...AGCTGGATTTGCTCCACAGACCGGGGCCAGGCCTTCAGAGACCTTCGCACGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR GCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCCGGAGCCGAAGCCGCTaGCGGAGCCGGCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTRSRSR*RSRQVW
Trigger: CCACACCTGCCGGCTCCGGCAGCGGCTTCGGCTCCG...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp AGGCTGAAGATCAGCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACACGGAGCCGAAGCCGCTaGCGGAGCCGGCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RLKISMCRATASRLFSSTRSRSR*RSRQVW
Trigger: CCACACCTGCCGGCTCCGGCAGCGGCTTCGGCTCCG...TGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGATCTTCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528412.5
ENST00000534214.1
CDS-3UTR GCA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACTGTGGGGTCCCACCCTaGAGAGGCTGGGTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYCGVPP*RGWVRP
Trigger: GGGCCTGACCCAGCCTCTGCAGGGTGGGACCCCACA...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCGCCAGCAGGTCGGCCTaGGCACGCACGAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTASRSA*ARTKAA
Trigger: GGCCGCCTTCGTGCGTGCCCAGGCCGACCTGCTGGC...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACCCCAGAGGCGGCTCATaGGGAACGCCTGGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYPRGGS*GTPGAL
Trigger: AAGGGCCCCAGGCGTTCCCCATGAGCCGCCTCTGGG...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACGCAGGTCCCAGTCGCTaGCACCGCGCCGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDAGPSR*HRAGRR
Trigger: ACGACGCCCGGCGCGGTGTCAGCGACTGGGACCTGC...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp TACCGGGCTAATTCCACAATCAAGTTCCCTCCGGGTGCCACACAGGCCCCAAGCACTCCTGGGGGTGAATaGCTTGAGCCCCGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: YRANSTIKFPPGATQAPSTPGGE*LEPRGH
Trigger: ATGACCGCGGGGCTCAAGTCATTCACCCCCAGGAGT...GCTTGGGGCCTGTGTGGCACCCGGAGGGAACTTGATTGTGGAATTAGCCCGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR GCA 90 bp GGTTCCTCCAGGGCTAGGCTGAAGATCAGCATGTGTCGGGCCACAGCTTCCAGAAGCTCGGGGTTGCTGTaGACTGTATCGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GSSRARLKISMCRATASRSSGLL*TVSAWE
Trigger: CTCCCAGGCCGATACAGTGCACAGCAACCCCGAGCT...TCTGGAAGCTGTGGCCCGACACATGCTGATCTTCAGCCTAGCCCTGGAGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528412.5
ENST00000534214.1
CDS-3UTR GCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCCCAGTACCCGCGCGCTaGCACGCGCTCCCCACGGTA +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTPVPAR*HALPTV
Trigger: TACCGTGGGGAGCGCGTGGCAGCGCGCGGGTACTGG...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp AGGCTGAAGATCAGCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACATTCCGGGGTCGGGGCTaGTGGAGTCCCTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RLKISMCRATASRLFSSTFRGRG*WSPWLR
Trigger: CCGGAGCCAGGGACTCCAGCAGCCCCGACCCCGGAA...TGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGATCTTCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR GCA 90 bp TACCGGGCTAATTCCACAATCAAGTTCCCTCCGGGTGCCACACAGGCCCCAAGCTTGAATCCCTGCAGCTaGTCCTGCCGCACGTCCACC +
Preference number: 4 (lower is better)
Translates to: YRANSTIKFPPGATQAPSLNPCS*SCRTST
Trigger: GGTGGACGTGCGGCAGGAGCAGCTGCAGGGATTCAA...GCTTGGGGCCTGTGTGGCACCCGGAGGGAACTTGATTGTGGAATTAGCCCGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCCACGAAGGCGGCCACTaGCGGGCGCAGCAGCGCGTT +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTHEGGH*RAQQRV
Trigger: AACGCGCTGCTGCGCCCGCCAGTGGCCGCCTTCGTG...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGGCCAGCAGGTCGGCCTaGGCACGCACGAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWASRSA*ARTKAA
Trigger: GGCCGCCTTCGTGCGTGCCCAGGCCGACCTGCTGGC...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp TCAGCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTGAGCGGGGTCGGGGCTGCTaGAGTCCCTGGCTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: SACVGPQLPDYSPAQRTERGRGC*SPWLRA
Trigger: AGCCCGGAGCCAGGGACTCCAGCAGCCCCGACCCCG...CTCAGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528412.5
3UTR CAA 72 bp GCTGGGACAGTGTTGCCCAGAGCTGATTCCTGGGACTaGCAGAAACGTGCGAAGGTCTCTGAAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: AGTVLPRADSWD*QKRAKVSEGLA
Trigger: GGCCAGGCCTTCAGAGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACTGTCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR GCA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCCGGAGCCGAAGCCGCTaGCGGAGCCGGCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFRSRSR*RSRQVW
Trigger: CCACACCTGCCGGCTCCGGCAGCGGCTTCGGCTCCG...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCGGCTCGGGGACCAGGTaGGCCAGCAGGTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFGSGTR*ASRSAW
Trigger: CCAGGCCGACCTGCTGGCGCACCTGGTCCCCGAGCC...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACCCAGTACCCGCGCGCTaGCACGCGCTCCCCACGGTA +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDPVPAR*HALPTV
Trigger: TACCGTGGGGAGCGCGTGGCAGCGCGCGGGTACTGG...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACCAAGTTCCCTCCGGGTaGCACACAGGCCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYQVPSG*HTGPKL
Trigger: GAGCTTGGGGCCTGTGTGGCACCCGGAGGGAACTTG...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACCGGGTGTTGAATCCCTaGAGCTGCTCCTGCCGCACG +
Preference number: 4 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYRVLNP*SCSCRT
Trigger: CGTGCGGCAGGAGCAGCTGCAGGGATTCAACACCCG...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AGGCTGAAGATCAGCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACACCCAGAGGCGGCTCATaGGGAACGCCTGGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: RLKISMCRATASRLFSSTPRGGS*GTPGAL
Trigger: AAGGGCCCCAGGCGTTCCCCATGAGCCGCCTCTGGG...TGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGATCTTCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCCCCGGCCGTCTTGACTaGCTGGCCGTTGCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTPGRLD*LAVARP
Trigger: CGGACGAGCAACGGCCAGCCAGTCAAGACGGCCGGG...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp ACCGGACGCCAGGGTCCGGTTGGGCACATGATAGGCGCTGGAGTCCCTGAGTTCTCAGGGATGAGAAGATaGACCATACCACAGGCCACA +
Preference number: 4 (lower is better)
Translates to: TGRQGPVGHMIGAGVPEFSGMRR*TIPQAT
Trigger: TGTGGCCTGTGGTATGGTCCATCTTCTCATCCCTGA...GAACTCAGGGACTCCAGCGCCTATCATGTGCCCAACCGGACCCTGGCGTCCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTCCGGGGTCGGGGCTaGAGTCCCTGGCTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDFRGRG*SPWLRA
Trigger: AGCCCGGAGCCAGGGACTCCAGCCCCGACCCCGGAA...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527223.6
ENST00000588076.1
CDS-3UTR TCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCACGTGCGAAGGTCTCTaGAGGCCTGGCCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTTCEGL*RPGPGL
Trigger: CAGACCGGGGCCAGGCCTTCAGAGACCTTCGCACGT...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp AGGCTGAAGATCAGCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAGGAGGACTTTCAGCCTaGAGGTCCAGCGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: RLKISMCRATASRLFSSTGGLSA*RSSAGD
Trigger: GTCCCCGGCGCTGGACCTGCAGGCTGAAAGTCCTCC...TGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGATCTTCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528412.5
ENST00000534214.1
CDS-3UTR GCA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACCCTCAAGGGCTGGGTTaGTGGCTTCAAGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYPQGLG*WLQEAG
Trigger: CCCAGCCTCTTGAAGCCAGCAACCCAGCCCTTGAGG...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGTGTGGGGTCCCACCCTaGAGAGGCTGGGTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWCGVPP*RGWVRP
Trigger: GGGCCTGACCCAGCCTCTGCAGGGTGGGACCCCACA...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTTGTGGGGTCCCACCCTaGAGAGGCTGGGTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPCGVPP*RGWVRP
Trigger: GGGCCTGACCCAGCCTCTGCAGGGTGGGACCCCACA...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp CAGTGTTGCCCAGAGCTGATTCCTGGGACTTGCAGAAACGTGCGAAGGTCTCTGCTCAGTGCAGCACTGTaGACCCGCGGCACTCCACAA +
Preference number: 4 (lower is better)
Translates to: QCCPELIPGTCRNVRRSLLSAAL*TRGTPQ
Trigger: TTGTGGAGTGCCGCGGGTCCACAGTGCTGCACTGAG...CAGAGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACACGAAGGCGGCCACTaGCGGGCGCAGCAGCGCGTT +
Preference number: 4 (lower is better)
Translates to: LRTLAADLEWYQRVLILQHEGGH*RAQQRV
Trigger: AACGCGCTGCTGCGCCCGCCAGTGGCCGCCTTCGTG...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp CATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTGAGGTTTCACGAAGGCGGCCACTaGCGGGCGCAGCAGCGCGTT +
Preference number: 4 (lower is better)
Translates to: HVSGHSFQIILQHKELRFHEGGH*RAQQRV
Trigger: AACGCGCTGCTGCGCCCGCCAGTGGCCGCCTTCGTG...AAACCTCAGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTGCCAGCAGGTCGGCCTaGGCACGCACGAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPASRSA*ARTKAA
Trigger: GGCCGCCTTCGTGCGTGCCCAGGCCGACCTGCTGGC...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCCTCATGGGGAACGCCTaGGGCCCTTTCTCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTLMGNA*GPFSPP
Trigger: TGGCGGCGAGAAAGGGCCCCAGGCGTTCCCCATGAG...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACCCCGGCCGTCTTGACTaGCTGGCCGTTGCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDPGRLD*LAVARP
Trigger: CGGACGAGCAACGGCCAGCCAGTCAAGACGGCCGGG...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTCCCGGCCGTCTTGACTaGCTGGCCGTTGCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPPGRLD*LAVARP
Trigger: CGGACGAGCAACGGCCAGCCAGTCAAGACGGCCGGG...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACAGGTCTCTGAAGGCCTaGCCCCGGTCTGTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYRSLKA*PRSVEQ
Trigger: TTGCTCCACAGACCGGGGCCAGGCCTTCAGAGACCT...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACCTGGCTTCAAGAGGCTaGGCCAGGATGTCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYLASRG*ARMSRG
Trigger: GCCCCTTGACATCCTGGCCCAGCCTCTTGAAGCCAG...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACCAAGGGCTGGGTTGCTaGCTTCAAGAGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYQGLGC*LQEAGP
Trigger: TGGCCCAGCCTCTTGAAGCCAGCAACCCAGCCCTTG...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACCAGGCCCTCAAGGGCTaGGTTGCTGGCTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYQALKG*VAGFKR
Trigger: CCTCTTGAAGCCAGCAACCCAGCCCTTGAGGGCCTG...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCCCACCCTGCAGAGGCTaGGTCAGGCCCTCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTPPCRG*VRPSRA
Trigger: AGCCCTTGAGGGCCTGACCCAGCCTCTGCAGGGTGG...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCGCAGGGCTCACAGTGTaGGGTCCCACCCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTAGLTV*GPTLQR
Trigger: CCTCTGCAGGGTGGGACCCCACACTGTGAGCCCTGC...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCCTCCCGGGGTGGGGGTaGCGGGTACTGAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTLPGWG*RVLSGN
Trigger: ATTCCCACTCAGTACCCGCCACCCCCACCCCGGGAG...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCCCAACACTCCCGGGGTaGGGGTGGCGGGTACTGAGT +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTPTLPG*GWRVLS
Trigger: ACTCAGTACCCGCCACCCCCACCCCGGGAGTGTTGG...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCAGGCGCTGGAGTCCCTaGGTTCAAAGGCGACGCCTG +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTRRWSP*VQRRRL
Trigger: CAGGCGTCGCCTTTGAACTCAGGGACTCCAGCGCCT...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp AAACGTGCGAAGGTCTCTGAAGGCCTGGCCCCGGTCTGTGGAGCAAATCCAGCTAGTGTTGCCCAGAGCTaGTTCCTGGGACTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: KRAKVSEGLAPVCGANPASVAQS*FLGLAE
Trigger: TTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACT...AGCTGGATTTGCTCCACAGACCGGGGCCAGGCCTTCAGAGACCTTCGCACGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR TCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCGAACCATCTGGGTGCTaGCCAGGCCCTGGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTEPSGC*PGPGEE
Trigger: CTCCTCACCAGGGCCTGGTCAGCACCCAGATGGTTC...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGGGAGGACTTTCAGCCTaGAGGTCCAGCGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWGGLSA*RSSAGD
Trigger: GTCCCCGGCGCTGGACCTGCAGGCTGAAAGTCCTCC...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000528412.5
CDS-3UTR GCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGGAGGACTTTCAGCCTaGAGGTCCAGCGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPGGLSA*RSSAGD
Trigger: GTCCCCGGCGCTGGACCTGCAGGCTGAAAGTCCTCC...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000528412.5
CDS-3UTR GCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGAGGGTCCGCAGCAGGTaGCGTCCATCCACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWRVRSR*RPSTEP
Trigger: GGGCTCTGTGGATGGACGGCACCTGCTGCGGACCCT...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCGGCTCGGGGACCAGGTaGGCCAGCAGGTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RIKLRTLAADLEWYQRVLGSGTR*ASRSAW
Trigger: CCAGGCCGACCTGCTGGCGCACCTGGTCCCCGAGCC...GAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACCGTCGTCCGCTTCGATaGCGAAGGCCACGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDRRPLR*RRPRRA
Trigger: GGCCCTTCGTGGCCTTCGGCATCGAAGCGGACGACG...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCCTTCCCTCCGCGTGCTaGTGCTCCTCCAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFLPSAC*CSSRSP
Trigger: GGGGGACCTGGAGGAGCAGCAGCACGCGGAGGGAAG...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCCCTGCAGCTGCTCCTaGCGCACGTCCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWPCSCS*RTSTRY
Trigger: GTACCTGGTGGACGTGCGGCAGGAGCAGCTGCAGGG...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCTGTGGGGTCCCACCCTaGAGAGGCTGGGTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFCGVPP*RGWVRP
Trigger: GGGCCTGACCCAGCCTCTGCAGGGTGGGACCCCACA...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAATGTGGGGTCCCACCCTaGAGAGGCTGGGTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LRTLAADLEWYQRVLILQCGVPP*RGWVRP
Trigger: GGGCCTGACCCAGCCTCTGCAGGGTGGGACCCCACA...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGGCATCCCTTTCAGCCTaGAGGTCCAGCGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWASLSA*RSSAGD
Trigger: GTCCCCGGCGCTGGACCTGCAGGCTGAAAGGGATGC...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527223.6
CDS-3UTR CCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTCACGAAGGCGGCCACTaGCGGGCGCAGCAGCGCGTT +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPHEGGH*RAQQRV
Trigger: AACGCGCTGCTGCGCCCGCCAGTGGCCGCCTTCGTG...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCTCATGGGGAACGCCTaGGGCCCTTTCTCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWLMGNA*GPFSPP
Trigger: TGGCGGCGAGAAAGGGCCCCAGGCGTTCCCCATGAG...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTCTCATGGGGAACGCCTaGGGCCCTTTCTCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPLMGNA*GPFSPP
Trigger: TGGCGGCGAGAAAGGGCCCCAGGCGTTCCCCATGAG...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCCCCAGAGGCGGCTCATaGGGAACGCCTGGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFPRGGS*GTPGAL
Trigger: AAGGGCCCCAGGCGTTCCCCATGAGCCGCCTCTGGG...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp TCAGCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTGAGGCCGTCTTGACTGGCTaGCCGTTGCTCGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SACVGPQLPDYSPAQRTEAVLTG*PLLVRR
Trigger: CCTGCGGACGAGCAACGGCCAGCCAGTCAAGACGGC...CTCAGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCCGGCCGTCTTGACTaGCTGGCCGTTGCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: LRTLAADLEWYQRVLILQPGRLD*LAVARP
Trigger: CGGACGAGCAACGGCCAGCCAGTCAAGACGGCCGGG...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCCGGGGTCGGGGCTGCTaGAGTCCCTGGCTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: RIKLRTLAADLEWYQRVLRGRGC*SPWLRA
Trigger: AGCCCGGAGCCAGGGACTCCAGCAGCCCCGACCCCG...GAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000528412.5
CDS-3UTR CCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCCACCCTGCAGAGGCTaGGTCAGGCCCTCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWPPCRG*VRPSRA
Trigger: AGCCCTTGAGGGCCTGACCCAGCCTCTGCAGGGTGG...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp TCAGCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTGAGGCAGGGCTCACAGTGTaGGGTCCCACCCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SACVGPQLPDYSPAQRTEAGLTV*GPTLQR
Trigger: CCTCTGCAGGGTGGGACCCCACACTGTGAGCCCTGC...CTCAGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp TCCGGTTCCTCCAGGGCTAGGCTGAAGATCAGCATGTGTCGGGCCACAGCTTCCAAGGACTCGGGAATCTaGGCTCTCATCTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: SGSSRARLKISMCRATASKDSGI*ALIFIP
Trigger: TGGGATGAAGATGAGAGCCCAGATTCCCGAGTCCTT...GGAAGCTGTGGCCCGACACATGCTGATCTTCAGCCTAGCCCTGGAGGAACCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528412.5
ENST00000534214.1
CDS-3UTR CCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGCTGGGGCACCATGGTaGTTGGCAGAGCGTCCACCG +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPAGAPW*LAERPP
Trigger: CGGTGGACGCTCTGCCAACCACCATGGTGCCCCAGC...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527223.6
CDS-3UTR CCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCGGGGCTGGAGTCCCTaGCTCCGGGCTTCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLIRGWSP*LRASLR
Trigger: GCGGAGGGAAGCCCGGAGCCAGGGACTCCAGCCCCG...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527223.6
ENST00000588076.1
CDS-3UTR TCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCCCTCCAGGGCTAGGCTaGAGATCAGCATGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTPPGLG*RSACVG
Trigger: CCCGACACATGCTGATCTTCAGCCTAGCCCTGGAGG...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp AGGCTGAAGATCAGCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACATCCGTCACGTTGTGTTaGGTGATCTCCCCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: RLKISMCRATASRLFSSTSVTLC*VISPAV
Trigger: GACGGCCGGGGAGATCACTCAACACAACGTGACGGA...TGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGATCTTCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR TCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACGCAGGAAGTGGACGGTaGAAGATTCCGGGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDAGSGR*KIPGSG
Trigger: CCCCGACCCCGGAATCTTTCACCGTCCACTTCCTGC...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGCAGGAAGTGGACGGTaGAAGATTCCGGGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPAGSGR*KIPGSG
Trigger: CCCCGACCCCGGAATCTTTCACCGTCCACTTCCTGC...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp GATCAGCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTGGCAGGAAGTGGACGGTaGAAGATTCCGGGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: DQHVSGHSFQIILQHKELAGSGR*KIPGSG
Trigger: CCCCGACCCCGGAATCTTTCACCGTCCACTTCCTGC...CAGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR TCA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAAACGTGCGAAGGTCTCTaGAGGCCTGGCCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: LRTLAADLEWYQRVLILQTCEGL*RPGPGL
Trigger: CAGACCGGGGCCAGGCCTTCAGAGACCTTCGCACGT...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCACGTGCGAAGGTCTCTaGAGGCCTGGCCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFTCEGL*RPGPGL
Trigger: CAGACCGGGGCCAGGCCTTCAGAGACCTTCGCACGT...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTACGTGCGAAGGTCTCTaGAGGCCTGGCCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFTCEGL*RPGPGL
Trigger: CAGACCGGGGCCAGGCCTTCAGAGACCTTCGCACGT...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGCACTCCACAACCGCTaGCCAGAGTCCCCGCCCTTT +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPALHNR*PESPPF
Trigger: AAAGGGCGGGGACTCTGGGCAGCGGTTGTGGAGTGC...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000527223.6
CDS-3UTR GCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTTCCTCTCTGCTCAGTaGAGCACTGTGGACCCGCGG +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTFLSAQ*STVDPR
Trigger: CCGCGGGTCCACAGTGCTGCACTGAGCAGAGAGGAA...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp TACCGGGCTAATTCCACAATCAAGTTCCCTCCGGGTGCCACACAGGCCCCAAGCTGTGGTCATCACCCTTaGCCACACCTTTATCCTCCA +
Preference number: 4 (lower is better)
Translates to: YRANSTIKFPPGATQAPSCGHHP*PHLYPP
Trigger: TGGAGGATAAAGGTGTGGGCAAGGGTGATGACCACA...GCTTGGGGCCTGTGTGGCACCCGGAGGGAACTTGATTGTGGAATTAGCCCGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR GCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCAGCTCGGGGTTGCTGTaGACTGTATCGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTSSGLL*TVSAWE
Trigger: CTCCCAGGCCGATACAGTGCACAGCAACCCCGAGCT...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACCATCTAGCTCGGGGTTaGTGTGCACTGTATCGGCCT +
Preference number: 4 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYHLARG*CALYRP
Trigger: AGGCCGATACAGTGCACAGCAACCCCGAGCTAGATG...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp AGATCAGCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTAGGGTCCGCAGCAGGTaGCGTCCATCCACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: RSACVGPQLPDYSPAQRTRVRSR*RPSTEP
Trigger: GGGCTCTGTGGATGGACGGCACCTGCTGCGGACCCT...AGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528412.5
ENST00000534214.1
CDS-3UTR GCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTCGTCGTCCGCTTCGATaGCGAAGGCCACGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFRRPLR*RRPRRA
Trigger: GGCCCTTCGTGGCCTTCGGCATCGAAGCGGACGACG...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTCTTCCCTCCGCGTGCTaGTGCTCCTCCAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPLPSAC*CSSRSP
Trigger: GGGGGACCTGGAGGAGCAGCAGCACGCGGAGGGAAG...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCTTCCGGGGTCGGGGCTaGTGGAGTCCCTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RIKLRTLAADLEWYQRVLFRGRG*WSPWLR
Trigger: CCGGAGCCAGGGACTCCAGCAGCCCCGACCCCGGAA...GAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000528412.5
CDS-3UTR GCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCTTCCGGGGTCGGGGCTaGTGGAGTCCCTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLIFRGRG*WSPWLR
Trigger: CCGGAGCCAGGGACTCCAGCAGCCCCGACCCCGGAA...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000528412.5
CDS-3UTR GCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTCCCTGCAGCTGCTCCTaGCGCACGTCCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFPCSCS*RTSTRY
Trigger: GTACCTGGTGGACGTGCGGCAGGAGCAGCTGCAGGG...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTCGGGTGTTGAATCCCTaGAGCTGCTCCTGCCGCACG +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPRVLNP*SCSCRT
Trigger: CGTGCGGCAGGAGCAGCTGCAGGGATTCAACACCCG...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp GGTTCCTCCAGGGCTAGGCTGAAGATCAGCATGTGTCGGGCCACAGCTTCCAGACTGATTCCTGGGACTTaGAGAAACGTGCGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: GSSRARLKISMCRATASRLIPGT*RNVRRS
Trigger: AGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAG...TCTGGAAGCTGTGGCCCGACACATGCTGATCTTCAGCCTAGCCCTGGAGGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCCTCAGTGCAGCACTGTaGACCCGCGGCACTCCACAA +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTLSAAL*TRGTPQ
Trigger: TTGTGGAGTGCCGCGGGTCCACAGTGCTGCACTGAG...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGAGCCGGCAGGTGTaGTCATCACCCTTGCCCACA +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWRSRQV*SSPLPT
Trigger: TGTGGGCAAGGGTGATGACCACACCTGCCGGCTCCG...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp AATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCGGGGTCGGGGCTGCTaGAGTCCCTGGCTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: NKIEDSSSGLRMVSAGSHRGRGC*SPWLRA
Trigger: AGCCCGGAGCCAGGGACTCCAGCAGCCCCGACCCCG...ATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000528412.5
CDS-3UTR CCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTCCTGGCCCCGGTCTGTaGAGCAAATCCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPPGPGL*SKSSCL
Trigger: CAGGCAGCTGGATTTGCTCCACAGACCGGGGCCAGG...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCCAGGCCCTCAAGGGCTaGGTTGCTGGCTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTQALKG*VAGFKR
Trigger: CCTCTTGAAGCCAGCAACCCAGCCCTTGAGGGCCTG...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAAGCAGGGCTCACAGTGTaGGGTCCCACCCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LRTLAADLEWYQRVLILQAGLTV*GPTLQR
Trigger: CCTCTGCAGGGTGGGACCCCACACTGTGAGCCCTGC...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTGCAGGGCTCACAGTGTaGGGTCCCACCCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFAGLTV*GPTLQR
Trigger: CCTCTGCAGGGTGGGACCCCACACTGTGAGCCCTGC...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTCAGAGGGCAGCTaGCAGGGCTCACAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPDSEGS*QGSQCG
Trigger: CCCACACTGTGAGCCCTGCCAGCTGCCCTCTGAGTC...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTGAGGTTGACTCAGAGGGCAGCTaGCAGGGCTCACAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: ACVGPQLPDYSPAQRTEVDSEGS*QGSQCG
Trigger: CCCACACTGTGAGCCCTGCCAGCTGCCCTCTGAGTC...AACCTCAGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACTCCCGGGGTGGGGGTaGCGGGTACTGAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: LRTLAADLEWYQRVLILQLPGWG*RVLSGN
Trigger: ATTCCCACTCAGTACCCGCCACCCCCACCCCGGGAG...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTCCAACACTCCCGGGGTaGGGGTGGCGGGTACTGAGT +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFPTLPG*GWRVLS
Trigger: ACTCAGTACCCGCCACCCCCACCCCGGGAGTGTTGG...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCCCAACACTCCCGGGGTaGGGGTGGCGGGTACTGAGT +
Preference number: 4 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFPTLPG*GWRVLS
Trigger: ACTCAGTACCCGCCACCCCCACCCCGGGAGTGTTGG...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCCAGCCACAGGGTGCCTaGGAACAAGGGGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTQPQGA*EQGGQS
Trigger: ACTTTGGCCCCCTTGTTCCCAGGCACCCTGTGGCTG...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTCCTCCAGGGCTAGGCTaGAGATCAGCATGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPPPGLG*RSACVG
Trigger: CCCGACACATGCTGATCTTCAGCCTAGCCCTGGAGG...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACCCTCCAGGGCTAGGCTaGAGATCAGCATGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDPPGLG*RSACVG
Trigger: CCCGACACATGCTGATCTTCAGCCTAGCCCTGGAGG...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACACTCCTGGGGGTGAATaGCTTGAGCCCCGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDTPGGE*LEPRGH
Trigger: ATGACCGCGGGGCTCAAGTCATTCACCCCCAGGAGT...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCAGGCGCTGGAGTCCCTaGGTTCAAAGGCGACGCCTG +
Preference number: 4 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFRRWSP*VQRRRL
Trigger: CAGGCGTCGCCTTTGAACTCAGGGACTCCAGCGCCT...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTTCCGTCACGTTGTGTTaGGTGATCTCCCCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPSVTLC*VISPAV
Trigger: GACGGCCGGGGAGATCACTCAACACAACGTGACGGA...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCGAACCATCTGGGTGCTaGCCAGGCCCTGGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFEPSGC*PGPGEE
Trigger: CTCCTCACCAGGGCCTGGTCAGCACCCAGATGGTTC...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTGAACCATCTGGGTGCTaGCCAGGCCCTGGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFEPSGC*PGPGEE
Trigger: CTCCTCACCAGGGCCTGGTCAGCACCCAGATGGTTC...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACCATCCCAGCTCACGTTaGACCTCCTGCGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDHPSSR*TSCEAR
Trigger: TCTGGCCTCGCAGGAGGTTCAACGTGAGCTGGGATG...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455045.5
ENST00000528412.5
CDS-3UTR GCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTGCACTCCACAACCGCTaGCCAGAGTCCCCGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFALHNR*PESPPF
Trigger: AAAGGGCGGGGACTCTGGGCAGCGGTTGTGGAGTGC...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000527223.6
CDS-3UTR GCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTGGAGGACTTTCAGCCTaGAGGTCCAGCGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPGGLSA*RSSAGD
Trigger: GTCCCCGGCGCTGGACCTGCAGGCTGAAAGTCCTCC...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000528412.5
CDS-3UTR GCA 90 bp TCAGCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTGAGAGCTCGGGGTTGCTGTaGACTGTATCGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SACVGPQLPDYSPAQRTESSGLL*TVSAWE
Trigger: CTCCCAGGCCGATACAGTGCACAGCAACCCCGAGCT...CTCAGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528412.5
ENST00000534214.1
CDS-3UTR GCA 90 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCCTTCCCTCCGCGTGCTaGTGCTCCTCCAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RIKLRTLAADLEWYQRVLLPSAC*CSSRSP
Trigger: GGGGGACCTGGAGGAGCAGCAGCACGCGGAGGGAAG...GAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp AATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATTTCCGGGGTCGGGGCTaGTGGAGTCCCTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: NKIEDSSSGLRMVSAGSHFRGRG*WSPWLR
Trigger: CCGGAGCCAGGGACTCCAGCAGCCCCGACCCCGGAA...ATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000528412.5
CDS-3UTR GCA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCCAAGTTCCCTCCGGGTaGCACACAGGCCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFQVPSG*HTGPKL
Trigger: GAGCTTGGGGCCTGTGTGGCACCCGGAGGGAACTTG...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTCCCTGCAGCTGCTCCTaGCGCACGTCCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPPCSCS*RTSTRY
Trigger: GTACCTGGTGGACGTGCGGCAGGAGCAGCTGCAGGG...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGTTGAATCCCTGCAGCTaGTCCTGCCGCACGTCCACC +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWLNPCS*SCRTST
Trigger: GGTGGACGTGCGGCAGGAGCAGCTGCAGGGATTCAA...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTCGGGTGTTGAATCCCTaGAGCTGCTCCTGCCGCACG +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFRVLNP*SCSCRT
Trigger: CGTGCGGCAGGAGCAGCTGCAGGGATTCAACACCCG...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTCTCAGTGCAGCACTGTaGACCCGCGGCACTCCACAA +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPLSAAL*TRGTPQ
Trigger: TTGTGGAGTGCCGCGGGTCCACAGTGCTGCACTGAG...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAAACGCCAGGGTCCGGTTaGGCACATGATAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LRTLAADLEWYQRVLILQTPGSG*AHDRRW
Trigger: CCAGCGCCTATCATGTGCCCAACCGGACCCTGGCGT...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCACGCCAGGGTCCGGTTaGGCACATGATAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFTPGSG*AHDRRW
Trigger: CCAGCGCCTATCATGTGCCCAACCGGACCCTGGCGT...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTGCCGTCTTGACTGGCTaGCCGTTGCTCGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPAVLTG*PLLVRR
Trigger: CCTGCGGACGAGCAACGGCCAGCCAGTCAAGACGGC...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGGCCCCGGTCTGTaGAGCAAATCCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LRTLAADLEWYQRVLILQPGPGL*SKSSCL
Trigger: CAGGCAGCTGGATTTGCTCCACAGACCGGGGCCAGG...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGAGGTCTCTGAAGGCCTaGCCCCGGTCTGTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWRSLKA*PRSVEQ
Trigger: TTGCTCCACAGACCGGGGCCAGGCCTTCAGAGACCT...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACAGGTCTCTGAAGGCCTaGCCCCGGTCTGTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDRSLKA*PRSVEQ
Trigger: TTGCTCCACAGACCGGGGCCAGGCCTTCAGAGACCT...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTCCGGGTTCCACAGCTaGGACAGTGTTGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDSGFHS*DSVAQS
Trigger: GCTCTGGGCAACACTGTCCCAGCTGTGGAACCCGGA...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCTGGCTTCAAGAGGCTaGGCCAGGATGTCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWLASRG*ARMSRG
Trigger: GCCCCTTGACATCCTGGCCCAGCCTCTTGAAGCCAG...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACCTGGCTTCAAGAGGCTaGGCCAGGATGTCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDLASRG*ARMSRG
Trigger: GCCCCTTGACATCCTGGCCCAGCCTCTTGAAGCCAG...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACCAAGGGCTGGGTTGCTaGCTTCAAGAGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDQGLGC*LQEAGP
Trigger: TGGCCCAGCCTCTTGAAGCCAGCAACCCAGCCCTTG...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCAAGGGCTGGGTTGCTaGCTTCAAGAGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWQGLGC*LQEAGP
Trigger: TGGCCCAGCCTCTTGAAGCCAGCAACCCAGCCCTTG...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACCAGGCCCTCAAGGGCTaGGTTGCTGGCTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDQALKG*VAGFKR
Trigger: CCTCTTGAAGCCAGCAACCCAGCCCTTGAGGGCCTG...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCGACTCAGAGGGCAGCTaGCAGGGCTCACAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFDSEGS*QGSQCG
Trigger: CCCACACTGTGAGCCCTGCCAGCTGCCCTCTGAGTC...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTCTCCCGGGGTGGGGGTaGCGGGTACTGAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPLPGWG*RVLSGN
Trigger: ATTCCCACTCAGTACCCGCCACCCCCACCCCGGGAG...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GTCCCTGAGTTCAAAGGCGACGCCTGTGTCCCGCCAGCGTCGGAACTCCTGGGGCTCAGAAGTGGAATTTaGAATTCTGAGAGAACAATC +
Preference number: 4 (lower is better)
Translates to: VPEFKGDACVPPASELLGLRSGI*NSERTI
Trigger: GATTGTTCTCTCAGAATTCCAAATTCCACTTCTGAG...CCCCAGGAGTTCCGACGCTGGCGGGACACAGGCGTCGCCTTTGAACTCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp AATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATTTCCGGGGTCGGGGCTaGAGTCCCTGGCTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: NKIEDSSSGLRMVSAGSHFRGRG*SPWLRA
Trigger: AGCCCGGAGCCAGGGACTCCAGCCCCGACCCCGGAA...ATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527223.6
ENST00000588076.1
CDS-3UTR TCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATGCAGGTCCCAGTCGCTaGCACCGCGCCGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYAGPSR*HRAGRR
Trigger: ACGACGCCCGGCGCGGTGTCAGCGACTGGGACCTGC...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTAGGCGCTGGAGTCCCTaGGTTCAAAGGCGACGCCTG +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPRRWSP*VQRRRL
Trigger: CAGGCGTCGCCTTTGAACTCAGGGACTCCAGCGCCT...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTGCAGGAAGTGGACGGTaGAAGATTCCGGGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPAGSGR*KIPGSG
Trigger: CCCCGACCCCGGAATCTTTCACCGTCCACTTCCTGC...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACGAGTCTGAGCAGAATTaGGCGGCAGGAAGTGGACGG +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDESEQN*AAGSGR
Trigger: CCGTCCACTTCCTGCCGCTCAATTCTGCTCAGACTC...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp CCCCACACTTCCAGGAAGGTCTCGCTTCGCTCTTGCAGCCCCATCTTCTCCGGTCTCAGAAATGGAATTTaGAAGTCTACCAACACTCCC +
Preference number: 4 (lower is better)
Translates to: PHTSRKVSLRSCSPIFSGLRNGI*KSTNTP
Trigger: GGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAG...ACCGGAGAAGATGGGGCTGCAAGAGCGAAGCGAGACCTTCCTGGAAGTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR TCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTCATCCCAGCTCACGTTaGACCTCCTGCGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFHPSSR*TSCEAR
Trigger: TCTGGCCTCGCAGGAGGTTCAACGTGAGCTGGGATG...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455045.5
ENST00000528412.5
CDS-3UTR TCA 90 bp AGATCAGCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTCATCCCAGCTCACGTTaGACCTCCTGCGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: RSACVGPQLPDYSPAQRTHPSSR*TSCEAR
Trigger: TCTGGCCTCGCAGGAGGTTCAACGTGAGCTGGGATG...AGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528412.5
ENST00000534214.1
CDS-3UTR GCA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAATTCCTCTCTGCTCAGTaGAGCACTGTGGACCCGCGG +
Preference number: 4 (lower is better)
Translates to: LRTLAADLEWYQRVLILQFLSAQ*STVDPR
Trigger: CCGCGGGTCCACAGTGCTGCACTGAGCAGAGAGGAA...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTACGCCCCTTCCTCTCTaGTCAGTGCAGCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPTPLPL*SVQHCG
Trigger: TCCACAGTGCTGCACTGAGCAGAGAGGAAGGGGCGT...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCGGAGGACTTTCAGCCTaGAGGTCCAGCGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: RIKLRTLAADLEWYQRVLGGLSA*RSSAGD
Trigger: GTCCCCGGCGCTGGACCTGCAGGCTGAAAGTCCTCC...GAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000528412.5
CDS-3UTR GCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTAGCTCGGGGTTGCTGTaGACTGTATCGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFSSGLL*TVSAWE
Trigger: CTCCCAGGCCGATACAGTGCACAGCAACCCCGAGCT...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp AGGCTGAAGATCAGCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACACATCTAGCTCGGGGTTaGTGTGCACTGTATCGGCCT +
Preference number: 4 (lower is better)
Translates to: RLKISMCRATASRLFSSTHLARG*CALYRP
Trigger: AGGCCGATACAGTGCACAGCAACCCCGAGCTAGATG...TGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGATCTTCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528412.5
ENST00000534214.1
CDS-3UTR GCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCAGGGTCCGCAGCAGGTaGCGTCCATCCACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLIRVRSR*RPSTEP
Trigger: GGGCTCTGTGGATGGACGGCACCTGCTGCGGACCCT...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGGGCTCGGGGACCAGGTaGGCCAGCAGGTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQGSGTR*ASRSAW
Trigger: CCAGGCCGACCTGCTGGCGCACCTGGTCCCCGAGCC...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTCGGGTGTTGAATCCCTaGAGCTGCTCCTGCCGCACG +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPRVLNP*SCSCRT
Trigger: CGTGCGGCAGGAGCAGCTGCAGGGATTCAACACCCG...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACCAGCTGGGACAGTGTTaGCCAGAGCTGATTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDQLGQC*PELIPG
Trigger: CCCAGGAATCAGCTCTGGGCAACACTGTCCCAGCTG...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCAGCTGGGACAGTGTTaGCCAGAGCTGATTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWQLGQC*PELIPG
Trigger: CCCAGGAATCAGCTCTGGGCAACACTGTCCCAGCTG...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCCCTCAAGGGCTGGGTTaGTGGCTTCAAGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFPQGLG*WLQEAG
Trigger: CCCAGCCTCTTGAAGCCAGCAACCCAGCCCTTGAGG...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTCCTCAAGGGCTGGGTTaGTGGCTTCAAGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFPQGLG*WLQEAG
Trigger: CCCAGCCTCTTGAAGCCAGCAACCCAGCCCTTGAGG...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTTGCACTGTATCGGCCTaGGAGTCTGGGTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPCTVSA*ESGSTG
Trigger: TCCTGTGGACCCAGACTCCCAGGCCGATACAGTGCA...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp GATCAGCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTGTGCACTGTATCGGCCTaGGAGTCTGGGTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: DQHVSGHSFQIILQHKELCTVSA*ESGSTG
Trigger: TCCTGTGGACCCAGACTCCCAGGCCGATACAGTGCA...CAGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528412.5
ENST00000534214.1
CDS-3UTR CCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGCACGAAGGCGGCCACTaGCGGGCGCAGCAGCGCGTT +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRHEGGH*RAQQRV
Trigger: AACGCGCTGCTGCGCCCGCCAGTGGCCGCCTTCGTG...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATGCCAGCAGGTCGGCCTaGGCACGCACGAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYASRSA*ARTKAA
Trigger: GGCCGCCTTCGTGCGTGCCCAGGCCGACCTGCTGGC...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp AATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCCAGAGGCGGCTCATaGGGAACGCCTGGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: NKIEDSSSGLRMVSAGSHPRGGS*GTPGAL
Trigger: AAGGGCCCCAGGCGTTCCCCATGAGCCGCCTCTGGG...ATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCGCCGTCTTGACTGGCTaGCCGTTGCTCGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLIAVLTG*PLLVRR
Trigger: CCTGCGGACGAGCAACGGCCAGCCAGTCAAGACGGC...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTAGGTCTCTGAAGGCCTaGCCCCGGTCTGTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFRSLKA*PRSVEQ
Trigger: TTGCTCCACAGACCGGGGCCAGGCCTTCAGAGACCT...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACTGGCTTCAAGAGGCTaGGCCAGGATGTCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LRTLAADLEWYQRVLILQLASRG*ARMSRG
Trigger: GCCCCTTGACATCCTGGCCCAGCCTCTTGAAGCCAG...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTCAAGGGCTGGGTTGCTaGCTTCAAGAGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFQGLGC*LQEAGP
Trigger: TGGCCCAGCCTCTTGAAGCCAGCAACCCAGCCCTTG...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACAGGCCCTCAAGGGCTaGGTTGCTGGCTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LRTLAADLEWYQRVLILQQALKG*VAGFKR
Trigger: CCTCTTGAAGCCAGCAACCCAGCCCTTGAGGGCCTG...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCCACCCTGCAGAGGCTaGGTCAGGCCCTCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLIPPCRG*VRPSRA
Trigger: AGCCCTTGAGGGCCTGACCCAGCCTCTGCAGGGTGG...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTCCCGGGGTGGGGGTaGCGGGTACTGAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLILPGWG*RVLSGN
Trigger: ATTCCCACTCAGTACCCGCCACCCCCACCCCGGGAG...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCCAACACTCCCGGGGTaGGGGTGGCGGGTACTGAGT +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLIPTLPG*GWRVLS
Trigger: ACTCAGTACCCGCCACCCCCACCCCGGGAGTGTTGG...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCGAGTCTGAGCAGAATTaGGCGGCAGGAAGTGGACGG +
Preference number: 4 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFESEQN*AAGSGR
Trigger: CCGTCCACTTCCTGCCGCTCAATTCTGCTCAGACTC...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACCCCCAAGCTCAGGGATaGGAAGATGGACCATACCAC +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDPQAQG*EDGPYH
Trigger: GTGGTATGGTCCATCTTCTCATCCCTGAGCTTGGGG...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCCCCAAGCTCAGGGATaGGAAGATGGACCATACCAC +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWPQAQG*EDGPYH
Trigger: GTGGTATGGTCCATCTTCTCATCCCTGAGCTTGGGG...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp TCCTACAACCTGACTTTGGAAGTTGGAGATAAGGGGTGTCTAGGGGTTGGGTCACCCCAAGCTCAGGGATaGGAAGATGGACCATACCAC +
Preference number: 4 (lower is better)
Translates to: SYNLTLEVGDKGCLGVGSPQAQG*EDGPYH
Trigger: GTGGTATGGTCCATCTTCTCATCCCTGAGCTTGGGG...TGACCCAACCCCTAGACACCCCTTATCTCCAACTTCCAAAGTCAGGTTGTAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR TCA 90 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCGAACCATCTGGGTGCTaGCCAGGCCCTGGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: RIKLRTLAADLEWYQRVLEPSGC*PGPGEE
Trigger: CTCCTCACCAGGGCCTGGTCAGCACCCAGATGGTTC...GAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCGCACTCCACAACCGCTaGCCAGAGTCCCCGCCCTTT +
Preference number: 4 (lower is better)
Translates to: RIKLRTLAADLEWYQRVLALHNR*PESPPF
Trigger: AAAGGGCGGGGACTCTGGGCAGCGGTTGTGGAGTGC...GAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000527223.6
CDS-3UTR GCA 90 bp GCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTGAGGTTCATCTAGCTCGGGGTTaGTGTGCACTGTATCGGCCT +
Preference number: 4 (lower is better)
Translates to: ACVGPQLPDYSPAQRTEVHLARG*CALYRP
Trigger: AGGCCGATACAGTGCACAGCAACCCCGAGCTAGATG...AACCTCAGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528412.5
ENST00000534214.1
CDS-3UTR GCA 90 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCCAAGTTCCCTCCGGGTaGCACACAGGCCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: RIKLRTLAADLEWYQRVLQVPSG*HTGPKL
Trigger: GAGCTTGGGGCCTGTGTGGCACCCGGAGGGAACTTG...GAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCAAGTTCCCTCCGGGTaGCACACAGGCCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLIQVPSG*HTGPKL
Trigger: GAGCTTGGGGCCTGTGTGGCACCCGGAGGGAACTTG...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTTTGAATCCCTGCAGCTaGTCCTGCCGCACGTCCACC +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPLNPCS*SCRTST
Trigger: GGTGGACGTGCGGCAGGAGCAGCTGCAGGGATTCAA...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTTGCACTGTATCGGCCTaGGAGTCTGGGTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFCTVSA*ESGSTG
Trigger: TCCTGTGGACCCAGACTCCCAGGCCGATACAGTGCA...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCACGCCAGGGTCCGGTTaGGCACATGATAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLITPGSG*AHDRRW
Trigger: CCAGCGCCTATCATGTGCCCAACCGGACCCTGGCGT...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCCTGGCCCCGGTCTGTaGAGCAAATCCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLIPGPGL*SKSSCL
Trigger: CAGGCAGCTGGATTTGCTCCACAGACCGGGGCCAGG...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTAGGTCTCTGAAGGCCTaGCCCCGGTCTGTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPRSLKA*PRSVEQ
Trigger: TTGCTCCACAGACCGGGGCCAGGCCTTCAGAGACCT...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTTCCGGGTTCCACAGCTaGGACAGTGTTGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPSGFHS*DSVAQS
Trigger: GCTCTGGGCAACACTGTCCCAGCTGTGGAACCCGGA...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTCAAGGGCTGGGTTGCTaGCTTCAAGAGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPQGLGC*LQEAGP
Trigger: TGGCCCAGCCTCTTGAAGCCAGCAACCCAGCCCTTG...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCGACTCAGAGGGCAGCTaGCAGGGCTCACAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLIDSEGS*QGSQCG
Trigger: CCCACACTGTGAGCCCTGCCAGCTGCCCTCTGAGTC...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTTGGAAGCATGTGGGATaGGACCACAGCGAGCAACTG +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPWKHVG*DHSEQL
Trigger: CAGTTGCTCGCTGTGGTCCCATCCCACATGCTTCCA...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455045.5
CDS-3UTR CCA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCCGGAGCCGGCAGGTGTaGTCATCACCCTTTATCCTC +
Preference number: 4 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFRSRQV*SSPFIL
Trigger: GAGGATAAAGGGTGATGACCACACCTGCCGGCTCCG...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524407.7
CDS-3UTR CCA 90 bp CATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTGAGGTTTCGGAGCCGGCAGGTGTaGTCATCACCCTTTATCCTC +
Preference number: 4 (lower is better)
Translates to: HVSGHSFQIILQHKELRFRSRQV*SSPFIL
Trigger: GAGGATAAAGGGTGATGACCACACCTGCCGGCTCCG...AAACCTCAGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534214.1
CDS-3UTR TCA 90 bp AATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATAGGCGCTGGAGTCCCTaGGTTCAAAGGCGACGCCTG +
Preference number: 4 (lower is better)
Translates to: NKIEDSSSGLRMVSAGSHRRWSP*VQRRRL
Trigger: CAGGCGTCGCCTTTGAACTCAGGGACTCCAGCGCCT...ATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAATTGTGGTGGAGAGTCTaGGCAGAATTGAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: LRTLAADLEWYQRVLILQLWWRV*AELSGR
Trigger: CCTGCCGCTCAATTCTGCTCAGACTCTCCACCACAA...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCTTGTGGTGGAGAGTCTaGGCAGAATTGAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFLWWRV*AELSGR
Trigger: CCTGCCGCTCAATTCTGCTCAGACTCTCCACCACAA...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTAGTGTTGCCCAGAGCTaGTTCCTGGGACTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPSVAQS*FLGLAE
Trigger: TTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACT...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACAGTGTTGCCCAGAGCTaGTTCCTGGGACTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDSVAQS*FLGLAE
Trigger: TTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACT...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGGGGGTGGCGGGTACTaGGTGGGAATGATTAGAATA +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPGGGGY*VGMIRI
Trigger: TATTCTAATCATTCCCACTCAGTACCCGCCACCCCC...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCCAAAGTCAAGGGCCTaGGACTCAGTGTCAGATCCT +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWPKSRA*DSVSDP
Trigger: AGGATCTGACACTGAGTCTCAGGCCCTTGACTTTGG...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACCCAAAGTCAAGGGCCTaGGACTCAGTGTCAGATCCT +
Preference number: 4 (lower is better)
Translates to: TLAADLEWYQRVLILQPDPKSRA*DSVSDP
Trigger: AGGATCTGACACTGAGTCTCAGGCCCTTGACTTTGG...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp GATCAGCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTGCCAAAGTCAAGGGCCTaGGACTCAGTGTCAGATCCT +
Preference number: 4 (lower is better)
Translates to: DQHVSGHSFQIILQHKELPKSRA*DSVSDP
Trigger: AGGATCTGACACTGAGTCTCAGGCCCTTGACTTTGG...CAGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR TCA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCACCACAGCGAGCAACTaGCCAATGAGAGTGAGCGAG +
Preference number: 4 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFTTASN*PMRVSE
Trigger: CTCGCTCACTCTCATTGGTCAGTTGCTCGCTGTGGT...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455045.5
CDS-3UTR TCA 90 bp TCCGGTTCCTCCAGGGCTAGGCTGAAGATCAGCATGTGTCGGGCCACAGCTTCCTCCAGCACAAAGAACTaGGGTTTTAGAATTTCAATC +
Preference number: 4 (lower is better)
Translates to: SGSSRARLKISMCRATASSSTKN*GFRISI
Trigger: GATTGAAATTCTAAAACCTCAGTTCTTTGTGCTGGA...GGAAGCTGTGGCCCGACACATGCTGATCTTCAGCCTAGCCCTGGAGGAACCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528412.5
ENST00000534214.1
CDS-3UTR GCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACGCCCCTTCCTCTCTaGTCAGTGCAGCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPTPLPL*SVQHCG
Trigger: TCCACAGTGCTGCACTGAGCAGAGAGGAAGGGGCGT...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTCATCTAGCTCGGGGTTaGTGTGCACTGTATCGGCCT +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFHLARG*CALYRP
Trigger: AGGCCGATACAGTGCACAGCAACCCCGAGCTAGATG...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp AATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCAAGTTCCCTCCGGGTaGCACACAGGCCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: NKIEDSSSGLRMVSAGSHQVPSG*HTGPKL
Trigger: GAGCTTGGGGCCTGTGTGGCACCCGGAGGGAACTTG...ATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCTTGAATCCCTGCAGCTaGTCCTGCCGCACGTCCACC +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLILNPCS*SCRTST
Trigger: GGTGGACGTGCGGCAGGAGCAGCTGCAGGGATTCAA...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCCTCAAGGGCTGGGTTaGTGGCTTCAAGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLIPQGLG*WLQEAG
Trigger: CCCAGCCTCTTGAAGCCAGCAACCCAGCCCTTGAGG...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATTGTGGGGTCCCACCCTaGAGAGGCTGGGTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYCGVPP*RGWVRP
Trigger: GGGCCTGACCCAGCCTCTGCAGGGTGGGACCCCACA...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCCCAGAGGCGGCTCATaGGGAACGCCTGGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYPRGGS*GTPGAL
Trigger: AAGGGCCCCAGGCGTTCCCCATGAGCCGCCTCTGGG...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGCCGTCTTGACTGGCTaGCCGTTGCTCGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRAVLTG*PLLVRR
Trigger: CCTGCGGACGAGCAACGGCCAGCCAGTCAAGACGGC...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCTCCGGGTTCCACAGCTaGGACAGTGTTGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: RIKLRTLAADLEWYQRVLSGFHS*DSVAQS
Trigger: GCTCTGGGCAACACTGTCCCAGCTGTGGAACCCGGA...GAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCTCCGGGTTCCACAGCTaGGACAGTGTTGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLISGFHS*DSVAQS
Trigger: GCTCTGGGCAACACTGTCCCAGCTGTGGAACCCGGA...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCCAAGGGCTGGGTTGCTaGCTTCAAGAGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RIKLRTLAADLEWYQRVLQGLGC*LQEAGP
Trigger: TGGCCCAGCCTCTTGAAGCCAGCAACCCAGCCCTTG...GAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGCAGGGCTCACAGTGTaGGGTCCCACCCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRAGLTV*GPTLQR
Trigger: CCTCTGCAGGGTGGGACCCCACACTGTGAGCCCTGC...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGCTCCCGGGGTGGGGGTaGCGGGTACTGAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRLPGWG*RVLSGN
Trigger: ATTCCCACTCAGTACCCGCCACCCCCACCCCGGGAG...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCCAGCCACAGGGTGCCTaGGAACAAGGGGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RIKLRTLAADLEWYQRVLQPQGA*EQGGQS
Trigger: ACTTTGGCCCCCTTGTTCCCAGGCACCCTGTGGCTG...GAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCAGCCACAGGGTGCCTaGGAACAAGGGGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLIQPQGA*EQGGQS
Trigger: ACTTTGGCCCCCTTGTTCCCAGGCACCCTGTGGCTG...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp AATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATTCCGTCACGTTGTGTTaGGTGATCTCCCCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: NKIEDSSSGLRMVSAGSHSVTLC*VISPAV
Trigger: GACGGCCGGGGAGATCACTCAACACAACGTGACGGA...ATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCGAGTCTGAGCAGAATTaGGCGGCAGGAAGTGGACGG +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLIESEQN*AAGSGR
Trigger: CCGTCCACTTCCTGCCGCTCAATTCTGCTCAGACTC...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTTTGTGGTGGAGAGTCTaGGCAGAATTGAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPLWWRV*AELSGR
Trigger: CCTGCCGCTCAATTCTGCTCAGACTCTCCACCACAA...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGACGTGCGAAGGTCTCTaGAGGCCTGGCCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQTCEGL*RPGPGL
Trigger: CAGACCGGGGCCAGGCCTTCAGAGACCTTCGCACGT...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTAGTGTTGCCCAGAGCTaGTTCCTGGGACTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFSVAQS*FLGLAE
Trigger: TTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACT...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACTCTCATCCTACAACCTaGCTTTGGAAGTTGGAGATA +
Preference number: 4 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYSHPTT*LWKLEI
Trigger: TATCTCCAACTTCCAAAGTCAGGTTGTAGGATGAGA...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAAGGGGGTGGCGGGTACTaGGTGGGAATGATTAGAATA +
Preference number: 4 (lower is better)
Translates to: LRTLAADLEWYQRVLILQGGGGY*VGMIRI
Trigger: TATTCTAATCATTCCCACTCAGTACCCGCCACCCCC...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp CATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTGAGGTTTGGGGGTGGCGGGTACTaGGTGGGAATGATTAGAATA +
Preference number: 4 (lower is better)
Translates to: HVSGHSFQIILQHKELRFGGGGY*VGMIRI
Trigger: TATTCTAATCATTCCCACTCAGTACCCGCCACCCCC...AAACCTCAGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR TCA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCACAACTTGCTTTACTTaGACCATCTGGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTTTCFT*TIWVLT
Trigger: GGTCAGCACCCAGATGGTTCAAGTAAAGCAAGTTGT...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTCATCTAGCTCGGGGTTaGTGTGCACTGTATCGGCCT +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPHLARG*CALYRP
Trigger: AGGCCGATACAGTGCACAGCAACCCCGAGCTAGATG...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATAGGGTCCGCAGCAGGTaGCGTCCATCCACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYRVRSR*RPSTEP
Trigger: GGGCTCTGTGGATGGACGGCACCTGCTGCGGACCCT...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGTCGTCCGCTTCGATaGCGAAGGCCACGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQRRPLR*RRPRRA
Trigger: GGCCCTTCGTGGCCTTCGGCATCGAAGCGGACGACG...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCCCTGCAGCTGCTCCTaGCGCACGTCCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQPCSCS*RTSTRY
Trigger: GTACCTGGTGGACGTGCGGCAGGAGCAGCTGCAGGG...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp AATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATTTGAATCCCTGCAGCTaGTCCTGCCGCACGTCCACC +
Preference number: 4 (lower is better)
Translates to: NKIEDSSSGLRMVSAGSHLNPCS*SCRTST
Trigger: GGTGGACGTGCGGCAGGAGCAGCTGCAGGGATTCAA...ATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTCTGATTCCTGGGACTTaGAGAAACGTGCGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPLIPGT*RNVRRS
Trigger: AGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAG...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCTGATTCCTGGGACTTaGAGAAACGTGCGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWLIPGT*RNVRRS
Trigger: AGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAG...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCCAGCTGGGACAGTGTTaGCCAGAGCTGATTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RIKLRTLAADLEWYQRVLQLGQC*PELIPG
Trigger: CCCAGGAATCAGCTCTGGGCAACACTGTCCCAGCTG...GAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp AATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTCAAGGGCTGGGTTaGTGGCTTCAAGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: NKIEDSSSGLRMVSAGSHPQGLG*WLQEAG
Trigger: CCCAGCCTCTTGAAGCCAGCAACCCAGCCCTTGAGG...ATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCTCATGGGGAACGCCTaGGGCCCTTTCTCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYLMGNA*GPFSPP
Trigger: TGGCGGCGAGAAAGGGCCCCAGGCGTTCCCCATGAG...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGACGCCAGGGTCCGGTTaGGCACATGATAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRTPGSG*AHDRRW
Trigger: CCAGCGCCTATCATGTGCCCAACCGGACCCTGGCGT...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATGCCGTCTTGACTGGCTaGCCGTTGCTCGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYAVLTG*PLLVRR
Trigger: CCTGCGGACGAGCAACGGCCAGCCAGTCAAGACGGC...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGTCAGGGATGAGAAGATaGACCATACCACAGGCCACA +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWSGMRR*TIPQAT
Trigger: TGTGGCCTGTGGTATGGTCCATCTTCTCATCCCTGA...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTTCAGGGATGAGAAGATaGACCATACCACAGGCCACA +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPSGMRR*TIPQAT
Trigger: TGTGGCCTGTGGTATGGTCCATCTTCTCATCCCTGA...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGCCTGGCCCCGGTCTGTaGAGCAAATCCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRPGPGL*SKSSCL
Trigger: CAGGCAGCTGGATTTGCTCCACAGACCGGGGCCAGG...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCCACCCTGCAGAGGCTaGGTCAGGCCCTCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQPPCRG*VRPSRA
Trigger: AGCCCTTGAGGGCCTGACCCAGCCTCTGCAGGGTGG...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGGCAGCGGACTTAGAATaGTATCAGCGGGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWAADLE*YQRVLI
Trigger: GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGC...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCTCCCGGGGTGGGGGTaGCGGGTACTGAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQLPGWG*RVLSGN
Trigger: ATTCCCACTCAGTACCCGCCACCCCCACCCCGGGAG...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCAAGATGACAGCTGGCTaGGGCACCATGGTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: RIKLRTLAADLEWYQRVLKMTAG*GTMVVG
Trigger: GCCAACCACCATGGTGCCCCAGCCAGCTGTCATCTT...GAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527223.6
3UTR CAA 72 bp AATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTaGGAAGTTGGAGATAAGGGGTGTCTAGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: NGISGFSSYNLT*EVGDKGCLGVG
Trigger: CCCAACCCCTAGACACCCCTTATCTCCAACTTCCAAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGACTCCTGGGGGTGAATaGCTTGAGCCCCGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRTPGGE*LEPRGH
Trigger: ATGACCGCGGGGCTCAAGTCATTCACCCCCAGGAGT...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGGCAGGAAGTGGACGGTaGAAGATTCCGGGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQAGSGR*KIPGSG
Trigger: CCCCGACCCCGGAATCTTTCACCGTCCACTTCCTGC...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCTTGTGGTGGAGAGTCTaGGCAGAATTGAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: RIKLRTLAADLEWYQRVLLWWRV*AELSGR
Trigger: CCTGCCGCTCAATTCTGCTCAGACTCTCCACCACAA...GAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTAGTGTTGCCCAGAGCTaGTTCCTGGGACTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPSVAQS*FLGLAE
Trigger: TTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACT...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTGGGGGTGGCGGGTACTaGGTGGGAATGATTAGAATA +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPGGGGY*VGMIRI
Trigger: TATTCTAATCATTCCCACTCAGTACCCGCCACCCCC...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTCCAAAGTCAAGGGCCTaGGACTCAGTGTCAGATCCT +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPPKSRA*DSVSDP
Trigger: AGGATCTGACACTGAGTCTCAGGCCCTTGACTTTGG...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATGAGGACCTGGCAAGATaGCAGCTGGCTGGGGCACCA +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYEDLAR*QLAGAP
Trigger: TGGTGCCCCAGCCAGCTGTCATCTTGCCAGGTCCTC...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527223.6
CDS-3UTR GCA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAATGTGGTCATCACCCTTaGCCACACCTTTATCCTCCA +
Preference number: 4 (lower is better)
Translates to: LRTLAADLEWYQRVLILQCGHHP*PHLYPP
Trigger: TGGAGGATAAAGGTGTGGGCAAGGGTGATGACCACA...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCATCTAGCTCGGGGTTaGTGTGCACTGTATCGGCCT +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLIHLARG*CALYRP
Trigger: AGGCCGATACAGTGCACAGCAACCCCGAGCTAGATG...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAAGTTCCCTCCGGGTaGCACACAGGCCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYQVPSG*HTGPKL
Trigger: GAGCTTGGGGCCTGTGTGGCACCCGGAGGGAACTTG...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCGGGTGTTGAATCCCTaGAGCTGCTCCTGCCGCACG +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYRVLNP*SCSCRT
Trigger: CGTGCGGCAGGAGCAGCTGCAGGGATTCAACACCCG...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACTGATTCCTGGGACTTaGAGAAACGTGCGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LRTLAADLEWYQRVLILQLIPGT*RNVRRS
Trigger: AGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAG...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTCTGATTCCTGGGACTTaGAGAAACGTGCGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFLIPGT*RNVRRS
Trigger: AGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAG...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCCTGATTCCTGGGACTTaGAGAAACGTGCGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFLIPGT*RNVRRS
Trigger: AGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAG...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGCTCAGTGCAGCACTGTaGACCCGCGGCACTCCACAA +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRLSAAL*TRGTPQ
Trigger: TTGTGGAGTGCCGCGGGTCCACAGTGCTGCACTGAG...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAATCAGGGATGAGAAGATaGACCATACCACAGGCCACA +
Preference number: 4 (lower is better)
Translates to: LRTLAADLEWYQRVLILQSGMRR*TIPQAT
Trigger: TGTGGCCTGTGGTATGGTCCATCTTCTCATCCCTGA...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCCTGGCCCCGGTCTGTaGAGCAAATCCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQPGPGL*SKSSCL
Trigger: CAGGCAGCTGGATTTGCTCCACAGACCGGGGCCAGG...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGCTGGCTTCAAGAGGCTaGGCCAGGATGTCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRLASRG*ARMSRG
Trigger: GCCCCTTGACATCCTGGCCCAGCCTCTTGAAGCCAG...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGCAGGCCCTCAAGGGCTaGGTTGCTGGCTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRQALKG*VAGFKR
Trigger: CCTCTTGAAGCCAGCAACCCAGCCCTTGAGGGCCTG...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATGACTCAGAGGGCAGCTaGCAGGGCTCACAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYDSEGS*QGSQCG
Trigger: CCCACACTGTGAGCCCTGCCAGCTGCCCTCTGAGTC...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGTCAGACTCCAGTTTTaGAGTCTGACTCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: RTLAADLEWYQRVLILQPVRLQF*SLTHSW
Trigger: CCAACTGTGAGTCAGACTCCAAAACTGGAGTCTGAC...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGGTCAGACTCCAGTTTTaGAGTCTGACTCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWVRLQF*SLTHSW
Trigger: CCAACTGTGAGTCAGACTCCAAAACTGGAGTCTGAC...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GATCAGCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTGGTCAGACTCCAGTTTTaGAGTCTGACTCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: DQHVSGHSFQIILQHKELVRLQF*SLTHSW
Trigger: CCAACTGTGAGTCAGACTCCAAAACTGGAGTCTGAC...CAGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CCA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAAGCAGCGGACTTAGAATaGTATCAGCGGGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: LRTLAADLEWYQRVLILQAADLE*YQRVLI
Trigger: GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGC...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGCAGCCACAGGGTGCCTaGGAACAAGGGGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRQPQGA*EQGGQS
Trigger: ACTTTGGCCCCCTTGTTCCCAGGCACCCTGTGGCTG...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCTGGCTGGGGCACCATaGTGGTTGGCAGAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYLAGAP*WLAERP
Trigger: TGGACGCTCTGCCAACCACCATGGTGCCCCAGCCAG...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527223.6
CDS-3UTR TCA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCCTCCAGGGCTAGGCTaGAGATCAGCATGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQPPGLG*RSACVG
Trigger: CCCGACACATGCTGATCTTCAGCCTAGCCCTGGAGG...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGACTCCTGGGGGTGAATaGCTTGAGCCCCGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQTPGGE*LEPRGH
Trigger: ATGACCGCGGGGCTCAAGTCATTCACCCCCAGGAGT...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGTCCGTCACGTTGTGTTaGGTGATCTCCCCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQSVTLC*VISPAV
Trigger: GACGGCCGGGGAGATCACTCAACACAACGTGACGGA...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATTCCGTCACGTTGTGTTaGGTGATCTCCCCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYSVTLC*VISPAV
Trigger: GACGGCCGGGGAGATCACTCAACACAACGTGACGGA...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGAGTCTGAGCAGAATTaGGCGGCAGGAAGTGGACGG +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRESEQN*AAGSGR
Trigger: CCGTCCACTTCCTGCCGCTCAATTCTGCTCAGACTC...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTACAACTTGCTTTACTTaGACCATCTGGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFTTCFT*TIWVLT
Trigger: GGTCAGCACCCAGATGGTTCAAGTAAAGCAAGTTGT...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp AGATCAGCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTACAACTTGCTTTACTTaGACCATCTGGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: RSACVGPQLPDYSPAQRTTTCFT*TIWVLT
Trigger: GGTCAGCACCCAGATGGTTCAAGTAAAGCAAGTTGT...AGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR TCA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACTCCAGCACAAAGAACTaGGGTTTTAGAATTTCAATC +
Preference number: 4 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYSSTKN*GFRISI
Trigger: GATTGAAATTCTAAAACCTCAGTTCTTTGTGCTGGA...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000455045.5
ENST00000528412.5
CDS-3UTR GCA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGAGCTCGGGGTTGCTGTaGACTGTATCGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQSSGLL*TVSAWE
Trigger: CTCCCAGGCCGATACAGTGCACAGCAACCCCGAGCT...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATTTGAATCCCTGCAGCTaGTCCTGCCGCACGTCCACC +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYLNPCS*SCRTST
Trigger: GGTGGACGTGCGGCAGGAGCAGCTGCAGGGATTCAA...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGTGCACTGTATCGGCCTaGGAGTCTGGGTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRCTVSA*ESGSTG
Trigger: TCCTGTGGACCCAGACTCCCAGGCCGATACAGTGCA...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATAGGTCTCTGAAGGCCTaGCCCCGGTCTGTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYRSLKA*PRSVEQ
Trigger: TTGCTCCACAGACCGGGGCCAGGCCTTCAGAGACCT...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATTCCGGGTTCCACAGCTaGGACAGTGTTGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYSGFHS*DSVAQS
Trigger: GCTCTGGGCAACACTGTCCCAGCTGTGGAACCCGGA...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCTGGCTTCAAGAGGCTaGGCCAGGATGTCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQLASRG*ARMSRG
Trigger: GCCCCTTGACATCCTGGCCCAGCCTCTTGAAGCCAG...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTGTCAGACTCCAGTTTTaGAGTCTGACTCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFVRLQF*SLTHSW
Trigger: CCAACTGTGAGTCAGACTCCAAAACTGGAGTCTGAC...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCCACAGGGTGCCTaGGAACAAGGGGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYQPQGA*EQGGQS
Trigger: ACTTTGGCCCCCTTGTTCCCAGGCACCCTGTGGCTG...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTCGAGGAATCAAGCAATaGAAGCATGTGGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPRGIKQ*KHVGWD
Trigger: GTCCCATCCCACATGCTTCCATTGCTTGATTCCTCG...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455045.5
CDS-3UTR CCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTAAGGACTCGGGAATCTaGGCTCTCATCTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPKDSGI*ALIFIP
Trigger: TGGGATGAAGATGAGAGCCCAGATTCCCGAGTCCTT...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455045.5
ENST00000528412.5
CDS-3UTR TCA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCTCAGAAATGGAATTTaGAAGTCTACCAACACTCCC +
Preference number: 4 (lower is better)
Translates to: RISEMEFESLPTLPGWGWLRNGI*KSTNTP
Trigger: GGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAG...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATACGCCCCTTCCTCTCTaGTCAGTGCAGCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYTPLPL*SVQHCG
Trigger: TCCACAGTGCTGCACTGAGCAGAGAGGAAGGGGCGT...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATTGCACTGTATCGGCCTaGGAGTCTGGGTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYCTVSA*ESGSTG
Trigger: TCCTGTGGACCCAGACTCCCAGGCCGATACAGTGCA...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGTTGTGGTGGAGAGTCTaGGCAGAATTGAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQLWWRV*AELSGR
Trigger: CCTGCCGCTCAATTCTGCTCAGACTCTCCACCACAA...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATTTGTGGTGGAGAGTCTaGGCAGAATTGAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYLWWRV*AELSGR
Trigger: CCTGCCGCTCAATTCTGCTCAGACTCTCCACCACAA...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCCCCAAGCTCAGGGATaGGAAGATGGACCATACCAC +
Preference number: 4 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQPQAQG*EDGPYH
Trigger: GTGGTATGGTCCATCTTCTCATCCCTGAGCTTGGGG...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTTCTCATCCTACAACCTaGCTTTGGAAGTTGGAGATA +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFSHPTT*LWKLEI
Trigger: TATCTCCAACTTCCAAAGTCAGGTTGTAGGATGAGA...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTCTCAGAAATGGAATTTaGAAGTCTACCAACACTCCC +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFLRNGI*KSTNTP
Trigger: GGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAG...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGCCAAAGTCAAGGGCCTaGGACTCAGTGTCAGATCCT +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRPKSRA*DSVSDP
Trigger: AGGATCTGACACTGAGTCTCAGGCCCTTGACTTTGG...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCACAACTTGCTTTACTTaGACCATCTGGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLITTCFT*TIWVLT
Trigger: GGTCAGCACCCAGATGGTTCAAGTAAAGCAAGTTGT...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR GCA 90 bp AATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATTGTGGTCATCACCCTTaGCCACACCTTTATCCTCCA +
Preference number: 4 (lower is better)
Translates to: NKIEDSSSGLRMVSAGSHCGHHP*PHLYPP
Trigger: TGGAGGATAAAGGTGTGGGCAAGGGTGATGACCACA...ATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp AATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATGCAGCGGACTTAGAATaGTATCAGCGGGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: NKIEDSSSGLRMVSAGSHAADLE*YQRVLI
Trigger: GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGC...ATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATGGGGGTGGCGGGTACTaGGTGGGAATGATTAGAATA +
Preference number: 4 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYGGGGY*VGMIRI
Trigger: TATTCTAATCATTCCCACTCAGTACCCGCCACCCCC...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR GCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGTGTGGTCATCACCCTTaGCCACACCTTTATCCTCCA +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRCGHHP*PHLYPP
Trigger: TGGAGGATAAAGGTGTGGGCAAGGGTGATGACCACA...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGTCAGGGATGAGAAGATaGACCATACCACAGGCCACA +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRSGMRR*TIPQAT
Trigger: TGTGGCCTGTGGTATGGTCCATCTTCTCATCCCTGA...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGCAGCGGACTTAGAATaGTATCAGCGGGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRAADLE*YQRVLI
Trigger: GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGC...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCTCTCATCCTACAACCTaGCTTTGGAAGTTGGAGATA +
Preference number: 4 (lower is better)
Translates to: RIKLRTLAADLEWYQRVLSHPTT*LWKLEI
Trigger: TATCTCCAACTTCCAAAGTCAGGTTGTAGGATGAGA...GAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTCAGAAATGGAATTTaGAAGTCTACCAACACTCCC +
Preference number: 4 (lower is better)
Translates to: IKLRTLAADLEWYQRVLILRNGI*KSTNTP
Trigger: GGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAG...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGACAACTTGCTTTACTTaGACCATCTGGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRTTCFT*TIWVLT
Trigger: GGTCAGCACCCAGATGGTTCAAGTAAAGCAAGTTGT...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR TCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTTCCAGCACAAAGAACTaGGGTTTTAGAATTTCAATC +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFSSTKN*GFRISI
Trigger: GATTGAAATTCTAAAACCTCAGTTCTTTGTGCTGGA...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455045.5
ENST00000528412.5
CDS-3UTR CCA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTCTCAGAAGTGGAATTTaGAATTCTGAGAGAACAATC +
Preference number: 4 (lower is better)
Translates to: LAADLEWYQRVLILQPDFLRSGI*NSERTI
Trigger: GATTGTTCTCTCAGAATTCCAAATTCCACTTCTGAG...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp AATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCTCAGAAATGGAATTTaGAAGTCTACCAACACTCCC +
Preference number: 4 (lower is better)
Translates to: NKIEDSSSGLRMVSAGSHLRNGI*KSTNTP
Trigger: GGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAG...ATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGGTCAGACTCCAGTTTTaGAGTCTGACTCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQVRLQF*SLTHSW
Trigger: CCAACTGTGAGTCAGACTCCAAAACTGGAGTCTGAC...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTCTCAGAAGTGGAATTTaGAATTCTGAGAGAACAATC +
Preference number: 4 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPLRSGI*NSERTI
Trigger: GATTGTTCTCTCAGAATTCCAAATTCCACTTCTGAG...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGCTCAGAAATGGAATTTaGAAGTCTACCAACACTCCC +
Preference number: 4 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRLRNGI*KSTNTP
Trigger: GGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAG...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CCA 90 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCCTCAGAAGTGGAATTTaGAATTCTGAGAGAACAATC +
Preference number: 4 (lower is better)
Translates to: RIKLRTLAADLEWYQRVLLRSGI*NSERTI
Trigger: GATTGTTCTCTCAGAATTCCAAATTCCACTTCTGAG...GAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR TCA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGTCTCATCCTACAACCTaGCTTTGGAAGTTGGAGATA +
Preference number: 4 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQSHPTT*LWKLEI
Trigger: TATCTCCAACTTCCAAAGTCAGGTTGTAGGATGAGA...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS GCA 90 bp CCAGCGCCGGGGACAGGCCCCACCAGGACACGGAGCCGAAGCCGCTaGCGGAGCCGGCAGGTGTGGTCATCACCCTTGCCCACACCTTTA +
Preference number: 5 (lower is better)
Translates to: PAPGTGPTRTRSRSR*RSRQVWSSPLPTPL
Trigger: TAAAGGTGTGGGCAAGGGTGATGACCACACCTGCCGGCTCCGGCAGCGGCTTCGGCTCCGTGTCCTGGTGGGGCCTGTCCCCGGCGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000527223.6
ENST00000528412.5
ENST00000528476.1
ENST00000534170.5
CDS-3UTR CAA 90 bp AGGCTGAGCCAGGGCAGCTGTTCCTCCAGGCGGTCGGGCTCGGGGACCAGGTGCGAGTCTGACTCACAGTaGGGCGGAGCCAAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: RLSQGSCSSRRSGSGTRCESDSQ*GGAKAP
Trigger: GGGGGCCTTGGCTCCGCCCAACTGTGAGTCAGACTC...GCACCTGGTCCCCGAGCCCGACCGCCTGGAGGAACAGCTGCCCTGGCTCAGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS GCA 90 bp CCAGCGCCGGGGACAGGCCCCACCAGGACACGGAGCCGAAGCCGCTaGCGGAGCCGGCAGGTGTGGTCATCACCCTTTATCCTCCAAATA +
Preference number: 5 (lower is better)
Translates to: PAPGTGPTRTRSRSR*RSRQVWSSPFILQI
Trigger: TATTTGGAGGATAAAGGGTGATGACCACACCTGCCGGCTCCGGCAGCGGCTTCGGCTCCGTGTCCTGGTGGGGCCTGTCCCCGGCGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000524407.7
ENST00000532817.5
ENST00000534214.1
ENST00000586877.1
CDS GCA 90 bp GCAGACGGTGTATCAGACCTTGCGTGCTGGGACTCACTTTCAGCCTaGAGGTCCAGCGCCGGGGACAGGCCCCACCAGGACACGGAGCCG +
Preference number: 5 (lower is better)
Translates to: ADGVSDLACWDSLSA*RSSAGDRPHQDTEP
Trigger: CGGCTCCGTGTCCTGGTGGGGCCTGTCCCCGGCGCTGGACCTGCAGGCTGAAAGTGAGTCCCAGCACGCAAGGTCTGATACACCGTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586877.1
CDS-3UTR CAA 90 bp GTCCCTGAGTTCAAAGGCGACGCCTGTGTCCCGCCAGCGTCGGAACTCCTGGGGTTGACTGGCTGGCCGTaGCTCGTCCGCAGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: VPEFKGDACVPPASELLGLTGWP*LVRRRL
Trigger: GAGCCTCCTGCGGACGAGCAACGGCCAGCCAGTCAA...CCCCAGGAGTTCCGACGCTGGCGGGACACAGGCGTCGCCTTTGAACTCAGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS GCA 90 bp TCTGAGTATTCTGGGATTCGCAGTCCGCAGACAGGACCTCGGGGCTaGCCCTGGGAGCGCGCCCTCTGCCGCTGGAGCGTTGGAGAACGT +
Preference number: 5 (lower is better)
Translates to: SEYSGIRSPQTGPRG*PWERALCRWSVGER
Trigger: ACGTTCTCCAACGCTCCAGCGGCAGAGGGCGCGCTCCCAGGGGCAGCCCCGAGGTCCTGTCTGCGGACTGCGAATCCCAGAATACTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586877.1
CDS CCA 90 bp CAAATATCCCGGGACGCCCCTTCCTCTCTGCTCAGTGCAGCACTGTaGACCCGCGGCACTCCACAACCGCTGCCCAGAGTCCCCGCCCTT +
Preference number: 5 (lower is better)
Translates to: QISRDAPSSLLSAAL*TRGTPQPLPRVPAL
Trigger: AAGGGCGGGGACTCTGGGCAGCGGTTGTGGAGTGCCGCGGGTCCACAGTGCTGCACTGAGCAGAGAGGAAGGGGCGTCCCGGGATATTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000527223.6
ENST00000528476.1
ENST00000532817.5
ENST00000586877.1
CDS-3UTR CAA 90 bp GAATTGAGCGGCAGGAAGTGGACGGTGAAAGATTCCGGGGTCGGGGCTGCTGGATCCCGCTCGCGGAACTaGAGGGCGCGGAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: ELSGRKWTVKDSGVGAAGSRSRN*RARRLS
Trigger: GCTCAGCCTCCGCGCCCTCAAGTTCCGCGAGCGGGA...TCCAGCAGCCCCGACCCCGGAATCTTTCACCGTCCACTTCCTGCCGCTCAATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CAA 90 bp GTCCCTGAGTTCAAAGGCGACGCCTGTGTCCCGCCAGCGTCGGAACTCCTGGGGTCCCTGACCCGGGTGTaGAATCCCTGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: VPEFKGDACVPPASELLGSLTRV*NPCSCS
Trigger: GGAGCAGCTGCAGGGATTCAACACCCGGGTCAGGGA...CCCCAGGAGTTCCGACGCTGGCGGGACACAGGCGTCGCCTTTGAACTCAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS CCA 90 bp GCTGTGCACTGTATCGGCCTGGGAGTCTGGGTCCACAGGAGGACCTaGCAAGATGACAGCTGGCTGGGGCACCATGGTGGTTGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: AVHCIGLGVWVHRRT*QDDSWLGHHGGWQS
Trigger: GCTCTGCCAACCACCATGGTGCCCCAGCCAGCTGTCATCTTGCCAGGTCCTCCTGTGGACCCAGACTCCCAGGCCGATACAGTGCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527223.6
ENST00000528476.1
ENST00000532817.5
ENST00000534170.5
CDS GCA 90 bp CCATCCACAGAGCCCAGAAGCAGCACATCTAGCTCGGGGTTGCTGTaGACTGTATCGGCCTGGGAGTCTGGGTCCACAGGAGGACCTGGC +
Preference number: 5 (lower is better)
Translates to: PSTEPRSSTSSSGLL*TVSAWESGSTGGPG
Trigger: GCCAGGTCCTCCTGTGGACCCAGACTCCCAGGCCGATACAGTGCACAGCAACCCCGAGCTAGATGTGCTGCTTCTGGGCTCTGTGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527223.6
ENST00000528476.1
ENST00000532817.5
ENST00000534170.5
CDS CCA 90 bp CCCACCAGGACACGGAGCCGAAGCCGCTGCCGGAGCCGGCAGGTGTaGTCATCACCCTGCGGAAAAGACATTCTTGCCCACACCTTTATC +
Preference number: 5 (lower is better)
Translates to: PTRTRSRSRCRSRQV*SSPCGKDILAHTFI
Trigger: GATAAAGGTGTGGGCAAGAATGTCTTTTCCGCAGGGTGATGACCACACCTGCCGGCTCCGGCAGCGGCTTCGGCTCCGTGTCCTGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526003.5
CDS-3UTR CAA 90 bp TCCGGTTCCTCCAGGGCTAGGCTGAAGATCAGCATGTGTCGGGCCACAGCTTCCCTGGGGGTGAATGACTaGAGCCCCGCGGTCATGCAG +
Preference number: 5 (lower is better)
Translates to: SGSSRARLKISMCRATASLGVND*SPAVMQ
Trigger: CTGCATGACCGCGGGGCTCAAGTCATTCACCCCCAG...GGAAGCTGTGGCCCGACACATGCTGATCTTCAGCCTAGCCCTGGAGGAACCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS TCA 90 bp AGGCGTTCCGCCCGTGGCCTAGGTTCTAAGGGGAGGTGTTTCCTCTaGGTATTCTGGGATTCGCAGTCCGCAGACAGGACCTCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: RRSARGLGSKGRCFL*VFWDSQSADRTSGL
Trigger: CAGCCCCGAGGTCCTGTCTGCGGACTGCGAATCCCAGAATACTCAGAGGAAACACCTCCCCTTAGAACCTAGGCCACGGGCGGAACGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586877.1
CDS-3UTR CAA 90 bp GACTTGCAGAAACGTGCGAAGGTCTCTGAAGGCCTGGCCCCGGTCTGTGGAGCACTCCGTCACGTTGTGTaGAGTGATCTCCCCGGCCGT +
Preference number: 5 (lower is better)
Translates to: DLQKRAKVSEGLAPVCGALRHVV*SDLPGR
Trigger: ACGGCCGGGGAGATCACTCAACACAACGTGACGGAG...TGCTCCACAGACCGGGGCCAGGCCTTCAGAGACCTTCGCACGTTTCTGCAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS TCA 90 bp CAAGGACTCGGGAATCTGGGCTCTCATCTTCATCCCAGCTCACGTTaGACCTCCTGCGAGGCCAGAACTTCGCTCGGGACAGGGTCCGCA +
Preference number: 5 (lower is better)
Translates to: QGLGNLGSHLHPSSR*TSCEARTSLGTGSA
Trigger: TGCGGACCCTGTCCCGAGCGAAGTTCTGGCCTCGCAGGAGGTTCAACGTGAGCTGGGATGAAGATGAGAGCCCAGATTCCCGAGTCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455045.5
ENST00000528412.5
ENST00000534214.1
CDS CCA 90 bp AGAAGCAGCACATCTAGCTCGGGGTTGCTGTGCACTGTATCGGCCTaGGAGTCTGGGTCCACAGGAGGACTTTCAGCCTGCAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: RSSTSSSGLLCTVSA*ESGSTGGLSACRSS
Trigger: GCTGGACCTGCAGGCTGAAAGTCCTCCTGTGGACCCAGACTCCCAGGCCGATACAGTGCACAGCAACCCCGAGCTAGATGTGCTGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000526003.5
ENST00000528412.5
ENST00000534214.1
CDS CCA 90 bp AGAAGCAGCACATCTAGCTCGGGGTTGCTGTGCACTGTATCGGCCTaGGAGTCTGGGTCCACAGGAGGACCTGGCAAGATGACAGCTGGC +
Preference number: 5 (lower is better)
Translates to: RSSTSSSGLLCTVSA*ESGSTGGPGKMTAG
Trigger: GCCAGCTGTCATCTTGCCAGGTCCTCCTGTGGACCCAGACTCCCAGGCCGATACAGTGCACAGCAACCCCGAGCTAGATGTGCTGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527223.6
ENST00000528476.1
ENST00000532817.5
ENST00000534170.5
CDS-3UTR CAA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACATCTCCCCGGCCGTCTaGACTGGCTGGCCGTTGCTC +
Preference number: 5 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYISPAV*TGWPLL
Trigger: GAGCAACGGCCAGCCAGTCAAGACGGCCGGGGAGAT...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS GCA 90 bp CCATCCACAGAGCCCAGAAGCAGCACATCTAGCTCGGGGTTGCTGTaGACTGTATCGGCCTGGGAGTCTGGGTCCACAGGAGGACTTTCA +
Preference number: 5 (lower is better)
Translates to: PSTEPRSSTSSSGLL*TVSAWESGSTGGLS
Trigger: TGAAAGTCCTCCTGTGGACCCAGACTCCCAGGCCGATACAGTGCACAGCAACCCCGAGCTAGATGTGCTGCTTCTGGGCTCTGTGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000526003.5
ENST00000528412.5
ENST00000534214.1
CDS-3UTR CAA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACGGTCTCGCTTCGCTCTaGCAGCCCCATCTTCTCCGG +
Preference number: 5 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYGLASL*QPHLLR
Trigger: CCGGAGAAGATGGGGCTGCAAGAGCGAAGCGAGACC...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTTCCCGCTCGCGGAACTaGAGGGCGCGGAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: RTLAADLEWYQRVLILQPSRSRN*RARRLS
Trigger: GCTCAGCCTCCGCGCCCTCAAGTTCCGCGAGCGGGA...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS TCA 90 bp GGGATGAGAAGATGGACCATACTGCAGAGAGGACGGAGGACAGGCTaGGATTCAGCTCCAAATCCGGAGGGAGGATGGGGCTCTGGGATC +
Preference number: 5 (lower is better)
Translates to: GMRRWTILQRGRRTG*DSAPNPEGGWGSGI
Trigger: GATCCCAGAGCCCCATCCTCCCTCCGGATTTGGAGCTGAATCTCAGCCTGTCCTCCGTCCTCTCTGCAGTATGGTCCATCTTCTCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587789.2
CDS CCA 90 bp AGTCCCCGCCCTTTTCGAGGAATCAAGCAATGGAAGCATGTGGGATaGGACCACAGCGAGCAACTGACCAATGAGAGTGAGCGAGGCCCG +
Preference number: 5 (lower is better)
Translates to: SPRPFRGIKQWKHVG*DHSEQLTNESERGP
Trigger: CGGGCCTCGCTCACTCTCATTGGTCAGTTGCTCGCTGTGGTCCCATCCCACATGCTTCCATTGCTTGATTCCTCGAAAAGGGCGGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455045.5
ENST00000528476.1
CDS-3UTR CAA 90 bp TCAGTGTCAGATCCTAGGCTGGGCTTAGAGCCTCAGAAGTGGAATTTGGAATTCTCCCGCTCGCGGAACTaGAGGGCGCGGAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SVSDPRLGLEPQKWNLEFSRSRN*RARRLS
Trigger: GCTCAGCCTCCGCGCCCTCAAGTTCCGCGAGCGGGA...GAATTCCAAATTCCACTTCTGAGGCTCTAAGCCCAGCCTAGGATCTGACACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCATCTCCCCGGCCGTCTaGACTGGCTGGCCGTTGCTC +
Preference number: 5 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTISPAV*TGWPLL
Trigger: GAGCAACGGCCAGCCAGTCAAGACGGCCGGGGAGAT...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS CCA 90 bp ACAACCGCTGCCCAGAGTCCCCGCCCTTTTCGAGGAATCAAGCAATaGAAGCATGTGGGATGGGACCACAGCGAGCAACTGACCAATGAG +
Preference number: 5 (lower is better)
Translates to: TTAAQSPRPFRGIKQ*KHVGWDHSEQLTNE
Trigger: CTCATTGGTCAGTTGCTCGCTGTGGTCCCATCCCACATGCTTCCATTGCTTGATTCCTCGAAAAGGGCGGGGACTCTGGGCAGCGGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455045.5
ENST00000528476.1
CDS-3UTR CAA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACACATCTAGCTCGGGGTaGCTGTGCACTGTATCGGCC +
Preference number: 5 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYTSSSG*LCTVSA
Trigger: GGCCGATACAGTGCACAGCAACCCCGAGCTAGATGT...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTTCCCGCTCGCGGAACTaGAGGGCGCGGAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPSRSRN*RARRLS
Trigger: GCTCAGCCTCCGCGCCCTCAAGTTCCGCGAGCGGGA...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCCTGGGGGTGAATGACTaGAGCCCCGCGGTCATGCAG +
Preference number: 5 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTLGVND*SPAVMQ
Trigger: CTGCATGACCGCGGGGCTCAAGTCATTCACCCCCAG...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGATCTCCCCGGCCGTCTaGACTGGCTGGCCGTTGCTC +
Preference number: 5 (lower is better)
Translates to: RISEMEFESLPTLPGWGWISPAV*TGWPLL
Trigger: GAGCAACGGCCAGCCAGTCAAGACGGCCGGGGAGAT...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTATCTCCCCGGCCGTCTaGACTGGCTGGCCGTTGCTC +
Preference number: 5 (lower is better)
Translates to: RTLAADLEWYQRVLILQPISPAV*TGWPLL
Trigger: GAGCAACGGCCAGCCAGTCAAGACGGCCGGGGAGAT...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGAGTCTGACTCACAGTaGGGCGGAGCCAAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: RTLAADLEWYQRVLILQPESDSQ*GGAKAP
Trigger: GGGGGCCTTGGCTCCGCCCAACTGTGAGTCAGACTC...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp CAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCGGGTACGTGTGGTCATCACCCTaGCCCACACCTTTATCCTCC +
Preference number: 5 (lower is better)
Translates to: QKWNLKVYQHSRGGGGGYVWSSP*PTPLSS
Trigger: GGAGGATAAAGGTGTGGGCAAGGGTGATGACCACAC...GTACCCGCCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp GCATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTGAGGTTGGTCTCGCTTCGCTCTaGCAGCCCCATCTTCTCCGG +
Preference number: 5 (lower is better)
Translates to: ACVGPQLPDYSPAQRTEVGLASL*QPHLLR
Trigger: CCGGAGAAGATGGGGCTGCAAGAGCGAAGCGAGACC...AACCTCAGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528412.5
ENST00000534214.1
CDS-3UTR CAA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCTCCCGCTCGCGGAACTaGAGGGCGCGGAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: IKLRTLAADLEWYQRVLISRSRN*RARRLS
Trigger: GCTCAGCCTCCGCGCCCTCAAGTTCCGCGAGCGGGA...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTCTGGGGGTGAATGACTaGAGCCCCGCGGTCATGCAG +
Preference number: 5 (lower is better)
Translates to: RTLAADLEWYQRVLILQPLGVND*SPAVMQ
Trigger: CTGCATGACCGCGGGGCTCAAGTCATTCACCCCCAG...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCCTCCGTCACGTTGTGTaGAGTGATCTCCCCGGCCGT +
Preference number: 5 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTLRHVV*SDLPGR
Trigger: ACGGCCGGGGAGATCACTCAACACAACGTGACGGAG...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTTCCCTGACCCGGGTGTaGAATCCCTGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RTLAADLEWYQRVLILQPSLTRV*NPCSCS
Trigger: GGAGCAGCTGCAGGGATTCAACACCCGGGTCAGGGA...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGCCCTCAAGGGCTGGGTaGCTGGCTTCAAGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: RISEMEFESLPTLPGWGWPSRAG*LASRGW
Trigger: CCAGCCTCTTGAAGCCAGCAACCCAGCCCTTGAGGG...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTGAGTCTGACTCACAGTaGGGCGGAGCCAAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: LAADLEWYQRVLILQPDFESDSQ*GGAKAP
Trigger: GGGGGCCTTGGCTCCGCCCAACTGTGAGTCAGACTC...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS TCA 90 bp GAATCAAGCAATGGAAGCATGTGGGATGGGACCACAGCGAGCAACTaGCCAATGAGAGTGAGCGAGGCCCGCCCTCTACAAACTTTTGGC +
Preference number: 5 (lower is better)
Translates to: ESSNGSMWDGTTASN*PMRVSEARPLQTFG
Trigger: GCCAAAAGTTTGTAGAGGGCGGGCCTCGCTCACTCTCATTGGTCAGTTGCTCGCTGTGGTCCCATCCCACATGCTTCCATTGCTTGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455045.5
ENST00000528476.1
CDS-3UTR CAA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAAGGTCTCGCTTCGCTCTaGCAGCCCCATCTTCTCCGG +
Preference number: 5 (lower is better)
Translates to: LRTLAADLEWYQRVLILQGLASL*QPHLLR
Trigger: CCGGAGAAGATGGGGCTGCAAGAGCGAAGCGAGACC...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAATCCCTGACCCGGGTGTaGAATCCCTGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LRTLAADLEWYQRVLILQSLTRV*NPCSCS
Trigger: GGAGCAGCTGCAGGGATTCAACACCCGGGTCAGGGA...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTTCCCTGACCCGGGTGTaGAATCCCTGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LAADLEWYQRVLILQPDFSLTRV*NPCSCS
Trigger: GGAGCAGCTGCAGGGATTCAACACCCGGGTCAGGGA...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCCTCAAGGGCTGGGTaGCTGGCTTCAAGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LRTLAADLEWYQRVLILQPSRAG*LASRGW
Trigger: CCAGCCTCTTGAAGCCAGCAACCCAGCCCTTGAGGG...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTGAGTCTGACTCACAGTaGGGCGGAGCCAAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPESDSQ*GGAKAP
Trigger: GGGGGCCTTGGCTCCGCCCAACTGTGAGTCAGACTC...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTCTCCGTCACGTTGTGTaGAGTGATCTCCCCGGCCGT +
Preference number: 5 (lower is better)
Translates to: LAADLEWYQRVLILQPDFLRHVV*SDLPGR
Trigger: ACGGCCGGGGAGATCACTCAACACAACGTGACGGAG...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACTCCGTCACGTTGTGTaGAGTGATCTCCCCGGCCGT +
Preference number: 5 (lower is better)
Translates to: LRTLAADLEWYQRVLILQLRHVV*SDLPGR
Trigger: ACGGCCGGGGAGATCACTCAACACAACGTGACGGAG...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS CCA 90 bp GGTTTTAGAATTTCAATCCCTTCCTCCCTCAAGGACTCGGGAATCTaGGCTCTCATCTTCATCCCAGCTCACGTTGAACCTCCTGCGAGG +
Preference number: 5 (lower is better)
Translates to: GFRISIPSSLKDSGI*ALIFIPAHVEPPAR
Trigger: CCTCGCAGGAGGTTCAACGTGAGCTGGGATGAAGATGAGAGCCCAGATTCCCGAGTCCTTGAGGGAGGAAGGGATTGAAATTCTAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455045.5
ENST00000528412.5
ENST00000534214.1
CDS-3UTR CAA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACGTGTGGTCATCACCCTaGCCCACACCTTTATCCTCC +
Preference number: 5 (lower is better)
Translates to: TLAADLEWYQRVLILQPDVWSSP*PTPLSS
Trigger: GGAGGATAAAGGTGTGGGCAAGGGTGATGACCACAC...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGTGTGGTCATCACCCTaGCCCACACCTTTATCCTCC +
Preference number: 5 (lower is better)
Translates to: RTLAADLEWYQRVLILQPVWSSP*PTPLSS
Trigger: GGAGGATAAAGGTGTGGGCAAGGGTGATGACCACAC...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp AGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTTCCAGCACAAAGAAGTaGAACCTCCTGCGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: RTLAADLEWYQRVLILQPSSTKK*NLLRGQ
Trigger: CTGGCCTCGCAGGAGGTTCAACTTCTTTGTGCTGGA...AGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391720.8
ENST00000524407.7
ENST00000527223.6
CDS-3UTR CAA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCGGTCTCGCTTCGCTCTaGCAGCCCCATCTTCTCCGG +
Preference number: 5 (lower is better)
Translates to: IKLRTLAADLEWYQRVLIGLASL*QPHLLR
Trigger: CCGGAGAAGATGGGGCTGCAAGAGCGAAGCGAGACC...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCGGTCTCGCTTCGCTCTaGCAGCCCCATCTTCTCCGG +
Preference number: 5 (lower is better)
Translates to: RIKLRTLAADLEWYQRVLGLASL*QPHLLR
Trigger: CCGGAGAAGATGGGGCTGCAAGAGCGAAGCGAGACC...GAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp AATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATTTGACTGGCTGGCCGTaGCTCGTCCGCAGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: NKIEDSSSGLRMVSAGSHLTGWP*LVRRRL
Trigger: GAGCCTCCTGCGGACGAGCAACGGCCAGCCAGTCAA...ATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCCCTCAAGGGCTGGGTaGCTGGCTTCAAGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: IKLRTLAADLEWYQRVLIPSRAG*LASRGW
Trigger: CCAGCCTCTTGAAGCCAGCAACCCAGCCCTTGAGGG...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp AATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATGAGTCTGACTCACAGTaGGGCGGAGCCAAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: NKIEDSSSGLRMVSAGSHESDSQ*GGAKAP
Trigger: GGGGGCCTTGGCTCCGCCCAACTGTGAGTCAGACTC...ATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTTCCAGCACAAAGAAGTaGAACCTCCTGCGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: LAADLEWYQRVLILQPDFSSTKK*NLLRGQ
Trigger: CTGGCCTCGCAGGAGGTTCAACTTCTTTGTGCTGGA...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391720.8
ENST00000524407.7
ENST00000527223.6
CDS-3UTR CAA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGTTGACTGGCTGGCCGTaGCTCGTCCGCAGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRLTGWP*LVRRRL
Trigger: GAGCCTCCTGCGGACGAGCAACGGCCAGCCAGTCAA...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp AATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATTCCCTGACCCGGGTGTaGAATCCCTGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: NKIEDSSSGLRMVSAGSHSLTRV*NPCSCS
Trigger: GGAGCAGCTGCAGGGATTCAACACCCGGGTCAGGGA...ATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTGCTGATTCCTGGGACTaGCAGAAACGTGCGAAGGTC +
Preference number: 5 (lower is better)
Translates to: LAADLEWYQRVLILQPDFADSWD*QKRAKV
Trigger: GACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAGC...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp GGTTCCTCCAGGGCTAGGCTGAAGATCAGCATGTGTCGGGCCACAGCTTCCAGAATGATTAGAATAAAATaGAGGACTCTAGCAGCGGAC +
Preference number: 5 (lower is better)
Translates to: GSSRARLKISMCRATASRMIRIK*RTLAAD
Trigger: GTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT...TCTGGAAGCTGTGGCCCGACACATGCTGATCTTCAGCCTAGCCCTGGAGGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528412.5
CDS-3UTR CAA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGTTGACTGGCTGGCCGTaGCTCGTCCGCAGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQLTGWP*LVRRRL
Trigger: GAGCCTCCTGCGGACGAGCAACGGCCAGCCAGTCAA...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATATCTCCCCGGCCGTCTaGACTGGCTGGCCGTTGCTC +
Preference number: 5 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYISPAV*TGWPLL
Trigger: GAGCAACGGCCAGCCAGTCAAGACGGCCGGGGAGAT...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp AATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCTCCGTCACGTTGTGTaGAGTGATCTCCCCGGCCGT +
Preference number: 5 (lower is better)
Translates to: NKIEDSSSGLRMVSAGSHLRHVV*SDLPGR
Trigger: ACGGCCGGGGAGATCACTCAACACAACGTGACGGAG...ATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGCCCTCAAGGGCTGGGTaGCTGGCTTCAAGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRPSRAG*LASRGW
Trigger: CCAGCCTCTTGAAGCCAGCAACCCAGCCCTTGAGGG...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACGGTCAGACTCCAGTTTaGGAGTCTGACTCACAGTTG +
Preference number: 5 (lower is better)
Translates to: TLAADLEWYQRVLILQPDGQTPV*ESDSQL
Trigger: CAACTGTGAGTCAGACTCCAAAACTGGAGTCTGACC...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGGGTCAGACTCCAGTTTaGGAGTCTGACTCACAGTTG +
Preference number: 5 (lower is better)
Translates to: RISEMEFESLPTLPGWGWGQTPV*ESDSQL
Trigger: CAACTGTGAGTCAGACTCCAAAACTGGAGTCTGACC...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp GAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTCCTACAACCTGACTTaGGAAGTTGGAGATAAGGGG +
Preference number: 5 (lower is better)
Translates to: EDSSSGLRMVSAGSHPTTSYNLT*EVGDKG
Trigger: CCCCTTATCTCCAACTTCCAAAGTCAGGTTGTAGGA...GGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCTGGGGGTGAATGACTaGAGCCCCGCGGTCATGCAG +
Preference number: 5 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQLGVND*SPAVMQ
Trigger: CTGCATGACCGCGGGGCTCAAGTCATTCACCCCCAG...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCGCTGATTCCTGGGACTaGCAGAAACGTGCGAAGGTC +
Preference number: 5 (lower is better)
Translates to: IKLRTLAADLEWYQRVLIADSWD*QKRAKV
Trigger: GACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAGC...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCCCTCAAGGGCTGGGTaGCTGGCTTCAAGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQPSRAG*LASRGW
Trigger: CCAGCCTCTTGAAGCCAGCAACCCAGCCCTTGAGGG...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTGGTCAGACTCCAGTTTaGGAGTCTGACTCACAGTTG +
Preference number: 5 (lower is better)
Translates to: LAADLEWYQRVLILQPDFGQTPV*ESDSQL
Trigger: CAACTGTGAGTCAGACTCCAAAACTGGAGTCTGACC...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTCCTACAACCTGACTTaGGAAGTTGGAGATAAGGGG +
Preference number: 5 (lower is better)
Translates to: TLAADLEWYQRVLILQPDSYNLT*EVGDKG
Trigger: CCCCTTATCTCCAACTTCCAAAGTCAGGTTGTAGGA...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp ACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACCACAACTTGCTTTACTaGAACCATCTGGGTGCTGAC +
Preference number: 5 (lower is better)
Translates to: TLAADLEWYQRVLILQPDHNLLY*NHLGAD
Trigger: GTCAGCACCCAGATGGTTCAAGTAAAGCAAGTTGTG...GTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS TCA 90 bp ATGTGTCGGGCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTaGGGTTTTAGAATTTCAATCCCTTCCTCCCTCAAGGACTCGGGA +
Preference number: 5 (lower is better)
Translates to: MCRATASRLFSSTKN*GFRISIPSSLKDSG
Trigger: TCCCGAGTCCTTGAGGGAGGAAGGGATTGAAATTCTAAAACCTCAGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455045.5
ENST00000528412.5
ENST00000534214.1
CDS-3UTR CAA 90 bp AATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATGCTGATTCCTGGGACTaGCAGAAACGTGCGAAGGTC +
Preference number: 5 (lower is better)
Translates to: NKIEDSSSGLRMVSAGSHADSWD*QKRAKV
Trigger: GACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAGC...ATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTTCCTACAACCTGACTTaGGAAGTTGGAGATAAGGGG +
Preference number: 5 (lower is better)
Translates to: LAADLEWYQRVLILQPDFSYNLT*EVGDKG
Trigger: CCCCTTATCTCCAACTTCCAAAGTCAGGTTGTAGGA...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp TTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACACAACTTGCTTTACTaGAACCATCTGGGTGCTGAC +
Preference number: 5 (lower is better)
Translates to: LRTLAADLEWYQRVLILQHNLLY*NHLGAD
Trigger: GTCAGCACCCAGATGGTTCAAGTAAAGCAAGTTGTG...TTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTGTGGTCATCACCCTaGCCCACACCTTTATCCTCC +
Preference number: 5 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRVWSSP*PTPLSS
Trigger: GGAGGATAAAGGTGTGGGCAAGGGTGATGACCACAC...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGCTGATTCCTGGGACTaGCAGAAACGTGCGAAGGTC +
Preference number: 5 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRADSWD*QKRAKV
Trigger: GACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAGC...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTTCCTACAACCTGACTTaGGAAGTTGGAGATAAGGGG +
Preference number: 5 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPSYNLT*EVGDKG
Trigger: CCCCTTATCTCCAACTTCCAAAGTCAGGTTGTAGGA...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp CTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTACAACCTGACTTTAAGGGTGGACACAACTaGCTTTACTTGAACCATCTG +
Preference number: 5 (lower is better)
Translates to: LAADLEWYQRVLILQPDFKGGHN*LYLNHL
Trigger: CAGATGGTTCAAGTAAAGCAAGTTGTGTCCACCCTT...AAAGTCAGGTTGTAGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455045.5
CDS-3UTR CAA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATTCCAGCACAAAGAAGTaGAACCTCCTGCGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYSSTKK*NLLRGQ
Trigger: CTGGCCTCGCAGGAGGTTCAACTTCTTTGTGCTGGA...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391720.8
ENST00000524407.7
ENST00000527223.6
CDS-3UTR CAA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATGCTGATTCCTGGGACTaGCAGAAACGTGCGAAGGTC +
Preference number: 5 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYADSWD*QKRAKV
Trigger: GACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAGC...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp AGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCTCCTACAACCTGACTTaGGAAGTTGGAGATAAGGGG +
Preference number: 5 (lower is better)
Translates to: RIKLRTLAADLEWYQRVLSYNLT*EVGDKG
Trigger: CCCCTTATCTCCAACTTCCAAAGTCAGGTTGTAGGA...GAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp AGAATCTCAGAAATGGAATTTGAAAGTCTACCAACACTCCCGGGGTGGGGGTGGATGATTAGAATAAAATaGAGGACTCTAGCAGCGGAC +
Preference number: 5 (lower is better)
Translates to: RISEMEFESLPTLPGWGWMIRIK*RTLAAD
Trigger: GTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT...CCACCCCCACCCCGGGAGTGTTGGTAGACTTTCAAATTCCATTTCTGAGATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp GTGGGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATGGTCAGACTCCAGTTTaGGAGTCTGACTCACAGTTG +
Preference number: 5 (lower is better)
Translates to: VGMIRIKLRTLAADLEWYGQTPV*ESDSQL
Trigger: CAACTGTGAGTCAGACTCCAAAACTGGAGTCTGACC...ATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp AAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCCTATGATTAGAATAAAATaGAGGACTCTAGCAGCGGAC +
Preference number: 5 (lower is better)
Translates to: KIEDSSSGLRMVSAGSHPMIRIK*RTLAAD
Trigger: GTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT...AGGATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGCACAACTTGCTTTACTaGAACCATCTGGGTGCTGAC +
Preference number: 5 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRHNLLY*NHLGAD
Trigger: GTCAGCACCCAGATGGTTCAAGTAAAGCAAGTTGTG...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp ATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGGTTCTCATCATGATTAGAATAAAATaGAGGACTCTAGCAGCGGAC +
Preference number: 5 (lower is better)
Translates to: IKLRTLAADLEWYQRVLIMIRIK*RTLAAD
Trigger: GTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT...GATGAGAACCCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS-3UTR CAA 90 bp GGAATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCACAACTTGCTTTACTaGAACCATCTGGGTGCTGAC +
Preference number: 5 (lower is better)
Translates to: GMIRIKLRTLAADLEWYQHNLLY*NHLGAD
Trigger: GTCAGCACCCAGATGGTTCAAGTAAAGCAAGTTGTG...CTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
CDS-3UTR CAA 90 bp ATGATTAGAATAAAATTGAGGACTCTAGCAGCGGACTTAGAATGGTATCAGCGGATGATTAGAATAAAATaGAGGACTCTAGCAGCGGAC +
Preference number: 5 (lower is better)
Translates to: MIRIKLRTLAADLEWYQRMIRIK*RTLAAD
Trigger: GTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT...CCGCTGATACCATTCTAAGTCCGCTGCTAGAGTCCTCAATTTTATTCTAATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000588076.1
CDS GCA 72 bp GGGACAGGCCCCACCAGGACACGGAGCCGAAGCCGCTaGCGGAGCCGGCAGGTGTGGTCATCACCCTTGCCC +
Preference number: 6 (lower is better)
Translates to: GTGPTRTRSRSR*RSRQVWSSPLP
Trigger: GGGCAAGGGTGATGACCACACCTGCCGGCTCCGGCAGCGGCTTCGGCTCCGTGTCCTGGTGGGGCCTGTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000527223.6
ENST00000528412.5
ENST00000528476.1
ENST00000534170.5
CDS GCA 72 bp GGGACAGGCCCCACCAGGACACGGAGCCGAAGCCGCTaGCGGAGCCGGCAGGTGTGGTCATCACCCTGCGGA +
Preference number: 6 (lower is better)
Translates to: GTGPTRTRSRSR*RSRQVWSSPCG
Trigger: TCCGCAGGGTGATGACCACACCTGCCGGCTCCGGCAGCGGCTTCGGCTCCGTGTCCTGGTGGGGCCTGTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526003.5
CDS GCA 72 bp CGGAATACGGCCTCCAGGGCATCCCGCTCGCGGAACTaGGGGGCCAGGCACGCGGTGGGACAGAGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: RNTASRASRSRN*GARHAVGQRKA
Trigger: TGCCTTCCTCTGTCCCACCGCGTGCCTGGCCCCGCAGTTCCGCGAGCGGGATGCCCTGGAGGCCGTATTCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533527.6
CDS CAA 72 bp GTCCCAGCCTCGCCGCGCACCTTGACTGGCTGGCCGTaGCTCGTCCGCAGGAGGCTCTCGTCGTCCGCTTCG +
Preference number: 6 (lower is better)
Translates to: VPASPRTLTGWP*LVRRRLSSSAS
Trigger: CGAAGCGGACGACGAGAGCCTCCTGCGGACGAGCAACGGCCAGCCAGTCAAGGTGCGCGGCGAGGCTGGGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527292.5
CDS CAA 90 bp CTACCCCCAGTCCCAGCCTCGCCGCGCACCTTGACTGGCTGGCCGTaGCTCGTCCGCAGGAGGCTCTCGTCGTCCGCTTCGATGCCGAAG +
Preference number: 6 (lower is better)
Translates to: LPPVPASPRTLTGWP*LVRRRLSSSASMPK
Trigger: CTTCGGCATCGAAGCGGACGACGAGAGCCTCCTGCGGACGAGCAACGGCCAGCCAGTCAAGGTGCGCGGCGAGGCTGGGACTGGGGGTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527292.5
CDS CCA 72 bp TCTACCCCCAGTCCCAGCCTCGCCGCGCACCTTGACTaGCTGGCCGTTGCTCGTCCGCAGGAGGCTCTCGTC +
Preference number: 6 (lower is better)
Translates to: STPSPSLAAHLD*LAVARPQEALV
Trigger: GACGAGAGCCTCCTGCGGACGAGCAACGGCCAGCCAGTCAAGGTGCGCGGCGAGGCTGGGACTGGGGGTAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527292.5
CDS CCA 72 bp ATTCGCAGTCCGCAGACAGGACCTCGGGGCTGCCCCTaGGAGCGCGCCCTCTGCCGCTGGAGCGTTGGAGAA +
Preference number: 6 (lower is better)
Translates to: IRSPQTGPRGCP*ERALCRWSVGE
Trigger: TTCTCCAACGCTCCAGCGGCAGAGGGCGCGCTCCCAGGGGCAGCCCCGAGGTCCTGTCTGCGGACTGCGAAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586877.1
CDS GCA 72 bp GGGACAGGCCCCACCAGGACACGGAGCCGAAGCCGCTaGCGGAGCCGGCAGGTGTGGTCATCACCCTTTATC +
Preference number: 6 (lower is better)
Translates to: GTGPTRTRSRSR*RSRQVWSSPFI
Trigger: GATAAAGGGTGATGACCACACCTGCCGGCTCCGGCAGCGGCTTCGGCTCCGTGTCCTGGTGGGGCCTGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000524407.7
ENST00000532817.5
ENST00000534214.1
ENST00000586877.1
CDS CCA 72 bp CGGGACGCCCCTTCCTCTCTGCTCAGTGCAGCACTGTaGACCCGCGGCACTCCACAACCGCTGCCCAGAGTC +
Preference number: 6 (lower is better)
Translates to: RDAPSSLLSAAL*TRGTPQPLPRV
Trigger: GACTCTGGGCAGCGGTTGTGGAGTGCCGCGGGTCCACAGTGCTGCACTGAGCAGAGAGGAAGGGGCGTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000528476.1
ENST00000532817.5
ENST00000586877.1
CDS TCA 72 bp CCTGGGAGTCTGGGTCCACAGGAGGACCTGGCAAGATaGCAGCTGGCTGGGGCACCATGGTGGTTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: PGSLGPQEDLAR*QLAGAPWWLAE
Trigger: CTCTGCCAACCACCATGGTGCCCCAGCCAGCTGTCATCTTGCCAGGTCCTCCTGTGGACCCAGACTCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527223.6
ENST00000528476.1
ENST00000532817.5
ENST00000534170.5
CDS CCA 72 bp ACACGGAGCCGAAGCCGCTGCCGGAGCCGGCAGGTGTaGTCATCACCCTGCGGAAAAGACATTCTTGCCCAC +
Preference number: 6 (lower is better)
Translates to: TRSRSRCRSRQV*SSPCGKDILAH
Trigger: GTGGGCAAGAATGTCTTTTCCGCAGGGTGATGACCACACCTGCCGGCTCCGGCAGCGGCTTCGGCTCCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526003.5
CDS CCA 72 bp GCTGGGAAGGCAGACGGTGTATCAGACCTTGCGTGCTaGGACTCACTTTCAGCCTGCAGGTCCAGCGCCGGG +
Preference number: 6 (lower is better)
Translates to: AGKADGVSDLAC*DSLSACRSSAG
Trigger: CCCGGCGCTGGACCTGCAGGCTGAAAGTGAGTCCCAGCACGCAAGGTCTGATACACCGTCTGCCTTCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586877.1
CDS GCA 72 bp CAGGCTGGGAAGGCAGACGGTGTATCAGACCTTGCGTaGTGGGACTCACTTTCAGCCTGCAGGTCCAGCGCC +
Preference number: 6 (lower is better)
Translates to: QAGKADGVSDLA*WDSLSACRSSA
Trigger: GGCGCTGGACCTGCAGGCTGAAAGTGAGTCCCAGCACGCAAGGTCTGATACACCGTCTGCCTTCCCAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586877.1
CDS CCA 72 bp CTCGGGGTTGCTGTGCACTGTATCGGCCTGGGAGTCTaGGTCCACAGGAGGACTTTCAGCCTGCAGGTCCAG +
Preference number: 6 (lower is better)
Translates to: LGVAVHCIGLGV*VHRRTFSLQVQ
Trigger: CTGGACCTGCAGGCTGAAAGTCCTCCTGTGGACCCAGACTCCCAGGCCGATACAGTGCACAGCAACCCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000526003.5
ENST00000528412.5
ENST00000534214.1
CDS CCA 72 bp TGTATCGGCCTGGGAGTCTGGGTCCACAGGAGGACCTaGCAAGATGACAGCTGGCTGGGGCACCATGGTGGT +
Preference number: 6 (lower is better)
Translates to: CIGLGVWVHRRT*QDDSWLGHHGG
Trigger: ACCACCATGGTGCCCCAGCCAGCTGTCATCTTGCCAGGTCCTCCTGTGGACCCAGACTCCCAGGCCGATACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527223.6
ENST00000528476.1
ENST00000532817.5
ENST00000534170.5
CDS GCA 72 bp TTATCCTCCAAATATCCCGGGACGCCCCTTCCTCTCTaGTCAGTGCAGCACTGTGGACCCGCGGCACTCCAC +
Preference number: 6 (lower is better)
Translates to: LSSKYPGTPLPL*SVQHCGPAALH
Trigger: GTGGAGTGCCGCGGGTCCACAGTGCTGCACTGAGCAGAGAGGAAGGGGCGTCCCGGGATATTTGGAGGATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000527223.6
ENST00000528412.5
ENST00000528476.1
ENST00000532817.5
ENST00000586877.1
CDS GCA 72 bp GAGCCCAGAAGCAGCACATCTAGCTCGGGGTTGCTGTaGACTGTATCGGCCTGGGAGTCTGGGTCCACAGGA +
Preference number: 6 (lower is better)
Translates to: EPRSSTSSSGLL*TVSAWESGSTG
Trigger: TCCTGTGGACCCAGACTCCCAGGCCGATACAGTGCACAGCAACCCCGAGCTAGATGTGCTGCTTCTGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000526003.5
ENST00000527223.6
ENST00000528412.5
ENST00000528476.1
ENST00000532817.5
ENST00000534170.5
ENST00000534214.1
CDS CAA 90 bp TCAAGGACTCGGGAATCTGGGCTCTCATCTTCATCCCAGCTCACGTaGAACCTCCTGCGAGGCCAGAACTTCGCTCGGGACAGGGTCCGC +
Preference number: 6 (lower is better)
Translates to: SRTRESGLSSSSQLT*NLLRGQNFARDRVR
Trigger: GCGGACCCTGTCCCGAGCGAAGTTCTGGCCTCGCAGGAGGTTCAACGTGAGCTGGGATGAAGATGAGAGCCCAGATTCCCGAGTCCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455045.5
ENST00000528412.5
ENST00000534214.1
CDS GCA 72 bp AGCCGCTGCCGGAGCCGGCAGGTGTGGTCATCACCCTaGGGAAAAGACATTCTTGCCCACACCTTTATCCTC +
Preference number: 6 (lower is better)
Translates to: SRCRSRQVWSSP*GKDILAHTFIL
Trigger: GAGGATAAAGGTGTGGGCAAGAATGTCTTTTCCGCAGGGTGATGACCACACCTGCCGGCTCCGGCAGCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526003.5
CDS CCA 72 bp ACATCTAGCTCGGGGTTGCTGTGCACTGTATCGGCCTaGGAGTCTGGGTCCACAGGAGGACTTTCAGCCTGC +
Preference number: 6 (lower is better)
Translates to: TSSSGLLCTVSA*ESGSTGGLSAC
Trigger: GCAGGCTGAAAGTCCTCCTGTGGACCCAGACTCCCAGGCCGATACAGTGCACAGCAACCCCGAGCTAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391720.8
ENST00000455045.5
ENST00000524407.7
ENST00000526003.5
ENST00000528412.5
ENST00000534214.1
CDS CCA 72 bp ACATCTAGCTCGGGGTTGCTGTGCACTGTATCGGCCTaGGAGTCTGGGTCCACAGGAGGACCTGGCAAGATG +
Preference number: 6 (lower is better)
Translates to: TSSSGLLCTVSA*ESGSTGGPGKM
Trigger: CATCTTGCCAGGTCCTCCTGTGGACCCAGACTCCCAGGCCGATACAGTGCACAGCAACCCCGAGCTAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527223.6
ENST00000528476.1
ENST00000532817.5
ENST00000534170.5
CDS TCA 72 bp GGGAATCTGGGCTCTCATCTTCATCCCAGCTCACGTTaGACCTCCTGCGAGGCCAGAACTTCGCTCGGGACA +
Preference number: 6 (lower is better)
Translates to: GNLGSHLHPSSR*TSCEARTSLGT
Trigger: TGTCCCGAGCGAAGTTCTGGCCTCGCAGGAGGTTCAACGTGAGCTGGGATGAAGATGAGAGCCCAGATTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455045.5
ENST00000528412.5
ENST00000528476.1
ENST00000534214.1
CDS TCA 72 bp AGATGGACCATACTGCAGAGAGGACGGAGGACAGGCTaGGATTCAGCTCCAAATCCGGAGGGAGGATGGGGC +
Preference number: 6 (lower is better)
Translates to: RWTILQRGRRTG*DSAPNPEGGWG
Trigger: GCCCCATCCTCCCTCCGGATTTGGAGCTGAATCTCAGCCTGTCCTCCGTCCTCTCTGCAGTATGGTCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587789.2
CDS TCA 72 bp AATGGAAGCATGTGGGATGGGACCACAGCGAGCAACTaGCCAATGAGAGTGAGCGAGGCCCGCCCTCTACAA +
Preference number: 6 (lower is better)
Translates to: NGSMWDGTTASN*PMRVSEARPLQ
Trigger: TTGTAGAGGGCGGGCCTCGCTCACTCTCATTGGTCAGTTGCTCGCTGTGGTCCCATCCCACATGCTTCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455045.5
ENST00000528476.1
CDS CCA 72 bp CCTTTTCGAGGAATCAAGCAATGGAAGCATGTGGGATaGGACCACAGCGAGCAACTGACCAATGAGAGTGAG +
Preference number: 6 (lower is better)
Translates to: PFRGIKQWKHVG*DHSEQLTNESE
Trigger: CTCACTCTCATTGGTCAGTTGCTCGCTGTGGTCCCATCCCACATGCTTCCATTGCTTGATTCCTCGAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455045.5
ENST00000528476.1
CDS TCA 72 bp GCCACAGCTTCCAGATTATTCTCCAGCACAAAGAACTaGGGTTTTAGAATTTCAATCCCTTCCTCCCTCAAG +
Preference number: 6 (lower is better)
Translates to: ATASRLFSSTKN*GFRISIPSSLK
Trigger: CTTGAGGGAGGAAGGGATTGAAATTCTAAAACCTCAGTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455045.5
ENST00000528412.5
ENST00000534214.1
CDS CCA 72 bp CATATTATAGGTAATCTAGAGATGATTTGCGGTGTATaGGACCATGTGTACAGGCTATTTGTAAGTACATCT +
Preference number: 6 (lower is better)
Translates to: HIIGNLEMICGV*DHVYRLFVSTS
Trigger: AGATGTACTTACAAATAGCCTGTACACATGGTCCCATACACCGCAAATCATCTCTAGATTACCTATAATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527166.1
CDS GCA 72 bp ATTGTATTACATATTATAGGTAATCTAGAGATGATTTaGGGTGTATGGGACCATGTGTACAGGCTATTTGTA +
Preference number: 6 (lower is better)
Translates to: IVLHIIGNLEMI*GVWDHVYRLFV
Trigger: TACAAATAGCCTGTACACATGGTCCCATACACCGCAAATCATCTCTAGATTACCTATAATATGTAATACAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527166.1
ENST00000527292.5