RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DMXL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000104093

Ensembl transcript IDs: ENST00000251076.9, ENST00000449909.7, ENST00000543779.6, ENST00000558124.5, ENST00000558507.1, ENST00000559059.1, ENST00000559498.1, ENST00000559769.1, ENST00000559868.1, ENST00000560421.5, ENST00000560891.6, ENST00000561079.1

Found 958 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTaGTCACTGCGCACTGCTCCACAGCTAAGAAAGTTTTCCAGGTGG +
Preference number: 1 (lower is better)
Translates to: IFSRKEWKRPLTAEN*SLRTAPQLRKFSRW
Trigger: CCACCTGGAAAACTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
3UTR-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTAACAGAGGAGGAGACTaGAGGCATGCTTCAGTCAGT +
Preference number: 2 (lower is better)
Translates to: RKEWKRPLTAENWSLRTANRGGD*RHASVS
Trigger: ACTGACTGAAGCATGCCTGCAGTCTCCTCCTCTGTT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
3UTR-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAGAAAGTTTTCCAGGTaGTCTAGCGCTCCTAACAAA +
Preference number: 2 (lower is better)
Translates to: METASHSRELVTAHCSTARKFSR*SSAPNK
Trigger: TTTGTTAGGAGCGCTAGACCACCTGGAAAACTTTCT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
3UTR-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGCTTAGAAAGCAGAATTaGCTAGTGATGACTGTAGTG +
Preference number: 2 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKLRKQN*LVMTVV
Trigger: CACTACAGTCATCACTAGGCAATTCTGCTTTCTAAG...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
3UTR-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTAGAAAGTTTTCCAGGTaGTCTAGCGCTCCTAACAAA +
Preference number: 2 (lower is better)
Translates to: RKEWKRPLTAENWSLRTARKFSR*SSAPNK
Trigger: TTTGTTAGGAGCGCTAGACCACCTGGAAAACTTTCT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
3UTR-3UTR GCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGTGATGACTGTAGTGTaGCTTTTAACTGAAATGTAT +
Preference number: 2 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENVMTVV*LLTEMY
Trigger: ATACATTTCAGTTAAAAGGCACACTACAGTCATCAC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
3UTR-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGTGATGACTGTAGTGTaGCTTTTAACTGAAATGTAT +
Preference number: 2 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQVMTVV*LLTEMY
Trigger: ATACATTTCAGTTAAAAGGCACACTACAGTCATCAC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
3UTR-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACTTAGAAAGCAGAATTaGCTAGTGATGACTGTAGTG +
Preference number: 2 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLRKQN*LVMTVV
Trigger: CACTACAGTCATCACTAGGCAATTCTGCTTTCTAAG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
3UTR-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGTGATGACTGTAGTGTaGCTTTTAACTGAAATGTAT +
Preference number: 2 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTVMTVV*LLTEMY
Trigger: ATACATTTCAGTTAAAAGGCACACTACAGTCATCAC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
3UTR CCA 72 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTaGTCACTGCGCACTGCTCCACAGCTAAGAAAGTTT +
Preference number: 3 (lower is better)
Translates to: RKEWKRPLTAEN*SLRTAPQLRKF
Trigger: AAACTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
3UTR CCA 72 bp CTGCGCACTGCTCCACAGCTAAGAAAGTTTTCCAGGTaGTCTAGCGCTCCTAACAAACACCTTATGATTATC +
Preference number: 3 (lower is better)
Translates to: LRTAPQLRKFSR*SSAPNKHLMII
Trigger: GATAATCATAAGGTGTTTGTTAGGAGCGCTAGACCACCTGGAAAACTTTCTTAGCTGTGGAGCAGTGCGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
3UTR GCA 72 bp CCTTATGATTATCCTTCATTCAACAGAGGAGGAGACTaGAGGCATGCTTCAGTCAGTGGTAAGAACAGGAAG +
Preference number: 3 (lower is better)
Translates to: PYDYPSFNRGGD*RHASVSGKNRK
Trigger: CTTCCTGTTCTTACCACTGACTGAAGCATGCCTGCAGTCTCCTCCTCTGTTGAATGAAGGATAATCATAAGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGCCTCGTCCCTGCCATaGGAGCTCCTCGACCGCCGC +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAASSLP*ELLDRR
Trigger: GCGGCGGTCGAGGAGCTCCCATGGCAGGGACGAGGC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251076.9
ENST00000560891.6
CDS-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGCCTCCGCCTCGTCCCTaGCATGGGAGCTCCTCGACC +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKPPPRP*HGSSST
Trigger: GGTCGAGGAGCTCCCATGGCAGGGACGAGGCGGAGG...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251076.9
ENST00000560891.6
CDS-3UTR CCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGCTCCGGAGCCCGGGCTaGACAGAATGCGCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKLRSPG*TECAGG
Trigger: ACCTCCCGCGCATTCTGTCCAGCCCGGGCTCCGGAG...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGCCCGGATGTTCCCACTaGCTGCTGCACCGGCGCACA +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKPGCSH*LLHRRT
Trigger: TGTGCGCCGGTGCAGCAGGCAGTGGGAACATCCGGG...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251076.9
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCTCCGCCTCGTCCCTaGCATGGGAGCTCCTCGACC +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAPPPRP*HGSSST
Trigger: GGTCGAGGAGCTCCCATGGCAGGGACGAGGCGGAGG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251076.9
ENST00000560891.6
CDS-3UTR GCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAGCCGTTTCCCTCTGTaGCTCCCTCGGAAACCCGCC +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTASRFPL*LPRKPA
Trigger: GGCGGGTTTCCGAGGGAGGCACAGAGGGAAACGGCT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251076.9
ENST00000560891.6
CDS-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCTCCGGAGCCCGGGCTaGACAGAATGCGCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTALRSPG*TECAGG
Trigger: ACCTCCCGCGCATTCTGTCCAGCCCGGGCTCCGGAG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGGACATCCCCGACGCTaGCCACGGAGTAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAGHPRR*PRSSSC
Trigger: ACAACTGCTACTCCGTGGGCAGCGTCGGGGATGTCC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTGGGCCTGGAACGTGTaGATGAGCTGCCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKWAWNV*MSCLCL
Trigger: CAGGCAAAGGCAGCTCATTCACACGTTCCAGGCCCA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCTGATCCATATGCCGTaGAGGGGACATCCCCGACGC +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTALIHMP*RGHPRR
Trigger: GCGTCGGGGATGTCCCCTTCACGGCATATGGATCAG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTGTGGCTGTGATCCGTaGGGACTGCCTACAGACATC +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTACGCDP*GLPTDI
Trigger: GATGTCTGTAGGCAGTCCTCACGGATCACAGCCACA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGCAGCCATGGCAGAGATaGAGGTGGATGCACCTGACT +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKQPWQR*RWMHLT
Trigger: AGTCAGGTGCATCCACCTTCATCTCTGCCATGGCTG...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGTGATCCGTGAGGACTaGCTACAGACATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKVIRED*LQTSPP
Trigger: AGGAGGGGATGTCTGTAGGCAGTCCTCACGGATCAC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGTAAGATGGTCTTTCTaGAGGCACCGGTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKVRWSF*RHRWWG
Trigger: ACCCCACCACCGGTGCCTGCAGAAAGACCATCTTAC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTTTCAGCGTGCCATCTaGACCACAGGAGAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKFQRAI*TTGEEP
Trigger: CGGCTCTTCTCCTGTGGTGCAGATGGCACGCTGAAA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTGCAGGCACCGGTGGTaGGGTAGCATCTTTTACAGG +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTACRHRW*GSIFYR
Trigger: CCTGTAAAAGATGCTACCCCACCACCGGTGCCTGCA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTCATACTGCAGTACCGTaGCACCATGATCGTGGCACG +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAHTAVP*HHDRGT
Trigger: CGTGCCACGATCATGGTGCCACGGTACTGCAGTATG...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGACATGCCAGGTCATTaGGGTGAAATCGATGACCGC +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKDMPGH*GEIDDR
Trigger: GCGGTCATCGATTTCACCTCAATGACCTGGCATGTC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGAGTTGCTGTTTGGGTaGATACTGCAGTACCGTGGC +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKELLFG*ILQYRG
Trigger: GCCACGGTACTGCAGTATGCACCCAAACAGCAACTC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTTCTGCAGGCACCGGTaGTGGGGTAGCATCTTTTAC +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAFCRHR*WGSIFY
Trigger: GTAAAAGATGCTACCCCACCACCGGTGCCTGCAGAA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTACTCAGATGGCCTGCTaGAGGCGTTGCTCTTATTAC +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTATQMAC*RRCSYY
Trigger: GTAATAAGAGCAACGCCTTCAGCAGGCCATCTGAGT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGACTCAGATGGCCTGCTaGAGGCGTTGCTCTTATTAC +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKTQMAC*RRCSYY
Trigger: GTAATAAGAGCAACGCCTTCAGCAGGCCATCTGAGT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGAGTTCCATCCTTACTaGAGCCAAACCACCACCTTG +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKEFHPY*SQTTTL
Trigger: CAAGGTGGTGGTTTGGCTTCAGTAAGGATGGAACTC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGAGTTCCATCCTTACTaGAGCCAAACCACCACCTTG +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAEFHPY*SQTTTL
Trigger: CAAGGTGGTGGTTTGGCTTCAGTAAGGATGGAACTC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCAGCCATGGCAGAGATaGAGGTGGATGCACCTGACT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAQPWQR*RWMHLT
Trigger: AGTCAGGTGCATCCACCTTCATCTCTGCCATGGCTG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGCTACAAGGAACATCTaGTCCAAACGGGTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAATRNI*SKRVRP
Trigger: AGGCCTTACCCGTTTGGAGCAGATGTTCCTTGTAGC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTCGACTTTCGTCTTTCTaGATGCTCTCGTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTARLSSF*MLSFGL
Trigger: CAGGCCAAACGAGAGCATGCAGAAAGACGAAAGTCG...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTGTAAGATGGTCTTTCTaGAGGCACCGGTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAVRWSF*RHRWWG
Trigger: ACCCCACCACCGGTGCCTGCAGAAAGACCATCTTAC...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTTTCAGCGTGCCATCTaGACCACAGGAGAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAFQRAI*TTGEEP
Trigger: CGGCTCTTCTCCTGTGGTGCAGATGGCACGCTGAAA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTCTGGTCACTGCGCACTaGTCCACAGCTAAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTALVTAH*STAKKV
Trigger: AACTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAG...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGCATTGGGCAAAACCCTaGTTTTCAGCGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKHWAKP*FSACHL
Trigger: CAGATGGCACGCTGAAAACCAGGGTTTTGCCCAATG...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGAACAATATCACAGCCTaGTCCATATGCCGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKNNITA*SICREG
Trigger: CCCTTCACGGCATATGGATCAGGCTGTGATATTGTT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGAACACTCCACACAGCTaGCTTGGATGTTTCCATGCT +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKNTPHS*LGCFHA
Trigger: AGCATGGAAACATCCAAGTCAGCTGTGTGGAGTGTT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTACTCCTCCAGTGTATaGCAAAGGTCCTATTGGGTC +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKYSSSV*QRSYWV
Trigger: GACCCAATAGGACCTTTGTCATACACTGGAGGAGTA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTGTCGACGCTGACCCTTaGATCAAGTACACTCCCAAC +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAVDADP*IKYTPN
Trigger: GTTGGGAGTGTACTTGATTCAAGGGTCAGCGTCGAC...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGATTACTGTCGACGCTaGCCCTTGAATCAAGTACAC +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKDYCRR*PLNQVH
Trigger: GTGTACTTGATTCAAGGGTCAGCGTCGACAGTAATC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGAGAGAAACAGGCAGTaGAGGAGTACCATCAACAGA +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKERNRQ*RSTINR
Trigger: TCTGTTGATGGTACTCCTTCACTGCCTGTTTCTCTC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTGGGGGTCCCCTCTCTaGATTGCTGGAATCATATTA +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAWGSPL*IAGIIL
Trigger: TAATATGATTCCAGCAATTCAGAGAGGGGACCCCCA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTGGGGGTCCCCTCTCTaGATTGCTGGAATCATATTA +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKWGSPL*IAGIIL
Trigger: TAATATGATTCCAGCAATTCAGAGAGGGGACCCCCA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTCTAAGGCACTGTCGTaGTCTTCACCCCAATCAAGA +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKSKALS*SSPQSR
Trigger: TCTTGATTGGGGTGAAGATCACGACAGTGCCTTAGA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTGGCACGTGAAACCATaGATGAGGCTGTTTCCGGGT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAWHVKP*MRLFPG
Trigger: ACCCGGAAACAGCCTCATTCATGGTTTCACGTGCCA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACCGGGCTGGACAGAATaGGCGGGAGGTGCGACAAGC +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSPGWTE*AGGATS
Trigger: GCTTGTCGCACCTCCCGCGCATTCTGTCCAGCCCGG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCCGGGCTGGACAGAATaGGCGGGAGGTGCGACAAGC +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENPGWTE*AGGATS
Trigger: GCTTGTCGCACCTCCCGCGCATTCTGTCCAGCCCGG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCAGCATGAGAAAGGCTaGTGGCAATGCTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAQHEKG*WQCWKW
Trigger: CCACTTCCAGCATTGCCAGCAGCCTTTCTCATGCTG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGGGAGATCAAGGGGTTaGCTATACACCAGTCTAGAA +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKGRSRG*LYTSLE
Trigger: TTCTAGACTGGTGTATAGCCAACCCCTTGATCTCCC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTACAGCTAACAGCAACTaGTCTTCCCACAATGCTCAC +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTATANSN*SSHNAH
Trigger: GTGAGCATTGTGGGAAGACCAGTTGCTGTTAGCTGT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTATGCAAAGTCACTTGTaGCTTTACTGTGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAMQSHL*LYCGTA
Trigger: GGCAGTGCCACAGTAAAGCCACAAGTGACTTTGCAT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTGGAGTGTCCAGATGTaGCAACTAGACTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAWSVQM*QLDLKR
Trigger: CCTCTTCAAGTCTAGTTGCCACATCTGGACACTCCA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTTAGGAGTTGCTGTTTaGGTGCATACTGCAGTACCG +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTALGVAV*VHTAVP
Trigger: CGGTACTGCAGTATGCACCCAAACAGCAACTCCTAA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTCGGCACACACCATCATaGCATGAAGTTAACAACACA +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTARHTPS*HEVNNT
Trigger: TGTGTTGTTAACTTCATGTCATGATGGTGTGTGCCG...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTGGTACACTAAGTCGTaGGTAAGTTCTAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKWYTKS*VSSRTS
Trigger: GGAAGTCCTAGAACTTACTCACGACTTAGTGTACCA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGAGTGGTAAAACTGAATaGCATGCCAGGTCATTGAGG +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKSGKTE*HARSLR
Trigger: CCTCAATGACCTGGCATGTCATTCAGTTTTACCACT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAGTGGTAAAACTGAATaGCATGCCAGGTCATTGAGG +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTASGKTE*HARSLR
Trigger: CCTCAATGACCTGGCATGTCATTCAGTTTTACCACT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTTGTCTGAGTCCCACTaGCAATCTAATTCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTALSESH*QSNSGV
Trigger: GACTCCTGAATTAGATTGTCAGTGGGACTCAGACAA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTTGTCTGAGTCCCACTaGCAATCTAATTCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKLSESH*QSNSGV
Trigger: GACTCCTGAATTAGATTGTCAGTGGGACTCAGACAA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTGACAGTAACTGGGAATaGGAGTTGGAAGCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTADSNWE*ELEAKP
Trigger: TGGCTTGGCTTCCAACTCTCATTCCCAGTTACTGTC...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGGAGCCATCTTCTTTTaGTACCCAGTCCAAATGTAC +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKGAIFF*YPVQMY
Trigger: GTACATTTGGACTGGGTATCAAAAGAAGATGGCTCC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGAAAGCCTTCCATACATaGAGATATTCGCACCGACTC +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKKAFHT*RYSHRL
Trigger: GAGTCGGTGCGAATATCTTCATGTATGGAAGGCTTT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAAGCCTTCCATACATaGAGATATTCGCACCGACTC +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAKAFHT*RYSHRL
Trigger: GAGTCGGTGCGAATATCTTCATGTATGGAAGGCTTT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTCTACCATTTCTTCCTaGTCCAGCAGATCACTCTCT +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTASTISS*SSRSLS
Trigger: AGAGAGTGATCTGCTGGATCAGGAAGAAATGGTAGA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGAAGGCTACAGTAGCTaGGAAATACTCTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKEGYSS*EILSGD
Trigger: ATCTCCTGAGAGTATTTCTCAGCTACTGTAGCCTTC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCTCACACCAGGCCATTaGGCAGGAGATGAATTTGGT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTALTPGH*AGDEFG
Trigger: ACCAAATTCATCTCCTGCTCAATGGCCTGGTGTGAG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGGTGGACCTTCAAACTaGTCCATTTTCTCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAGGPSN*SIFSCK
Trigger: CTTGCAAGAGAAAATGGATCAGTTTGAAGGTCCACC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTGGTCCAGCTCCCACTaGAAGGTCAGTTGGATATGT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAWSSSH*KVSWIC
Trigger: ACATATCCAACTGACCTTTCAGTGGGAGCTGGACCA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGAAGAATCCCGGGACTTaGATGGGGTATTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKKNPGT*MGYFQV
Trigger: AACCTGAAAATACCCCATTCAAGTCCCGGGATTCTT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCTTGCATTGCCAGCTTaGCGAAAGCAGACAAGTTGC +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTALALPA*RKQTSC
Trigger: GCAACTTGTCTGCTTTCGTCAAGCTGGCAATGCAAG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTCTATGCAGTTTTGGTTaGCCTGCTCCACATGTTCTT +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTALCSFG*PAPHVL
Trigger: AAGAACATGTGGAGCAGGTCAACCAAAACTGCATAG...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGATCAGCTTCAACCTTaGTGTGGCAATCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTADQLQP*CGNLLL
Trigger: TAGCAGAAGATTGCCACATCAAGGTTGAAGCTGATC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560891.6
CDS-3UTR GCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTACTGAGGTTTTGCACTaGCAGACACACTTCCAATCA +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTATEVLH*QTHFQS
Trigger: TGATTGGAAGTGTGTCTGGCAGTGCAAAACCTCAGT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTTTCGTCTTTCTGCATaGTCTCGTTTGGCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAFRLSA*SRLACN
Trigger: ATTGCAGGCCAAACGAGAGCATGCAGAAAGACGAAA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCGACTTTCGTCTTTCTaGATGCTCTCGTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTARLSSF*MLSFGL
Trigger: CAGGCCAAACGAGAGCATGCAGAAAGACGAAAGTCG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCCGAGATTAGGAGTTaGTGTTTGGGTGCATACTGC +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAPEIRS*CLGAYC
Trigger: GCAGTATGCACCCAAACAGCAACTCCTAATCTCGGG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCTGGTCACTGCGCACTaGTCCACAGCTAAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTALVTAH*STAKKV
Trigger: AACTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGCCTCGTCCCTGCCATaGGAGCTCCTCGACCGCCGC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQASSLP*ELLDRR
Trigger: GCGGCGGTCGAGGAGCTCCCATGGCAGGGACGAGGC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251076.9
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTCATGCATTGCTGTCTaGTCGGGCATTAATTCAGCA +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTASCIAV*SGINSA
Trigger: TGCTGAATTAATGCCCGACCAGACAGCAATGCATGA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGCCAACCAAGACATTTaGAATATCTGTGGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAANQDI*NICGRV
Trigger: AACCCTGCCACAGATATTCCAAATGTCTTGGTTGGC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCAGAACCGTAGGCAGTaGCATTGGTACACTAAGTCG +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAQNRRQ*HWYTKS
Trigger: CGACTTAGTGTACCAATGCCACTGCCTACGGTTCTG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTGAAGAAGAACTCAGATaGCCTGCTGAAGGCGTTGCT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAEEELR*PAEGVA
Trigger: AGCAACGCCTTCAGCAGGCCATCTGAGTTCTTCTTC...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTCTGCATGCTCTCGTTTaGCCTGCAATCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTALHALV*PAIFFF
Trigger: AAAGAAGAAGATTGCAGGCCAAACGAGAGCATGCAG...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTACTCTCAGGAGATCTTaGTTTTTCTGCAACCACGAC +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTATLRRS*FFCNHD
Trigger: GTCGTGGTTGCAGAAAAACCAAGATCTCCTGAGAGT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGAGTGGTAGTGGAGACTaGAGCTGCTTTACTGTAGTT +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKSGSGD*SCFTVV
Trigger: AACTACAGTAAAGCAGCTCCAGTCTCCACTACCACT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTTTCGCCTTTCCACCTaGATAGCCCAGATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAFRLST*IAQISF
Trigger: GAAGCTGATCTGGGCTATCCAGGTGGAAAGGCGAAA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGCTCCGGTGAGGACCTaGTGCAGATGCATCTCCGGA +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENAPVRT*CRCISG
Trigger: TCCGGAGATGCATCTGCATCAGGTCCTCACCGGAGC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAGCTCCGGTGAGGACCTaGTGCAGATGCATCTCCGGA +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSAPVRT*CRCISG
Trigger: TCCGGAGATGCATCTGCATCAGGTCCTCACCGGAGC...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTTCTCTATCCTCCTGTaGATGTTCCTCATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKFSILL*MFLIFS
Trigger: AGAGAAGATGAGGAACATTCACAGGAGGATAGAGAA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTGTAACAGCGTGTGGTaGGAATCTTTTGTCGCATTT +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKCNSVW*ESFVAF
Trigger: AAATGCGACAAAAGATTCTCACCACACGCTGTTACA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTATTGCATTTGGGTCATaGAATGTACGAGTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAIAFGS*NVRVAA
Trigger: TGCAGCAACTCGTACATTTCATGACCCAAATGCAAT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTCTTATTACTTCAACTaGTTCTGGGAGATCAAGGGG +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTASYYFN*FWEIKG
Trigger: CCCCTTGATCTCCCAGAATCAGTTGAAGTAATAAGA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGTGCATAAGATGACTTaGAAGTACCCTTGCATGTTC +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAVHKMT*KYPCMF
Trigger: GAACATGCAAGGGTACTTTCAAGTCATCTTATGCAC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTCTTGAGTGCATAAGATaGCTTGAAAGTACCCTTGCA +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTALECIR*LESTLA
Trigger: TGCAAGGGTACTTTCAAGTCATCTTATGCACTCAAG...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTGGGGGTCCCCTCTCTaGATTGCTGGAATCATATTA +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAWGSPL*IAGIIL
Trigger: TAATATGATTCCAGCAATTCAGAGAGGGGACCCCCA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTATCCATATGTATGACTaGCAGGCCAGTAGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAIHMYD*QASREV
Trigger: TACTTCTCTACTGGCCTGTCAGTCATACATATGGAT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGGACATCCCCGACGCTaGCCACGGAGTAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENGHPRR*PRSSSC
Trigger: ACAACTGCTACTCCGTGGGCAGCGTCGGGGATGTCC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGTAGTCTCACAAATCTaGTCACCCAAAAGACAGTCT +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAVVSQI*SPKRQS
Trigger: AGACTGTCTTTTGGGTGAGCAGATTTGTGAGACTAC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTCTGGTCTTCCCACAATaGTCACTGTACTGCTATTAT +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTALVFPQ*SLYCYY
Trigger: ATAATAGCAGTACAGTGAGCATTGTGGGAAGACCAG...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTCATTGCTGCCTCTTCTaGATTAGAACTATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAHCCLF*IRTISF
Trigger: GAAGCTGATAGTTCTAATGCAGAAGAGGCAGCAATG...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTCGAATGATCTTGCATTaGTGCCTCTTCTGCATTAGA +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTARMILH*CLFCIR
Trigger: TCTAATGCAGAAGAGGCAGCAATGCAAGATCATTCG...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTGGATGATGTCAATCTaGATGACTCCAGCCCCAATG +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAWMMSI*MTPAPM
Trigger: CATTGGGGCTGGAGTCATGCAGATTGACATCATCCA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGCAATTCTTCCTTGTTaGTTAGAACACTCCACACAG +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAAILPC*LEHSTQ
Trigger: CTGTGTGGAGTGTTCTAACCAACAAGGAAGAATTGC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTACAGCTAACAGCAACTaGTCTTCCCACAATGCTCAC +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTATANSN*SSHNAH
Trigger: GTGAGCATTGTGGGAAGACCAGTTGCTGTTAGCTGT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTCCCACTGTAAGAATGTaGGAGCCATCTTCTTTTGAT +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAPTVRM*EPSSFD
Trigger: ATCAAAAGAAGATGGCTCCCACATTCTTACAGTGGG...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTATGTTCAGTTTTGGCTaGTCTTCATCTTGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAMFSFG*SSSWAE
Trigger: TTCAGCCCAAGATGAAGACCAGCCAAAACTGAACAT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGATGTTCAGTTTTGGCTaGTCTTCATCTTGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKMFSFG*SSSWAE
Trigger: TTCAGCCCAAGATGAAGACCAGCCAAAACTGAACAT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTTTTTCTTTGTAAGATaGTCTTTCTGCAGGCACCGG +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKFFFVR*SFCRHR
Trigger: CCGGTGCCTGCAGAAAGACCATCTTACAAAGAAAAA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGATATAGTTAGGGGGTaGACCTTCAAACTGATCCAT +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKDIVRG*TFKLIH
Trigger: ATGGATCAGTTTGAAGGTCCACCCCCTAACTATATC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTGGAGTGTCCAGATGTaGCAACTAGACTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAWSVQM*QLDLKR
Trigger: CCTCTTCAAGTCTAGTTGCCACATCTGGACACTCCA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGAGAAAGTTTTCCAGGTaGTCTAGCGCTCCTAACAAA +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKRKFSR*SSAPNK
Trigger: TTTGTTAGGAGCGCTAGACCACCTGGAAAACTTTCT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGAACAGCATTACCATATaGAGCTGCAATTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKNSITI*SCNSSL
Trigger: CAAGGAAGAATTGCAGCTTCATATGGTAATGCTGTT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCAAATGTACAGATACTaGGGTTTTGCACTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAQMYRY*GFALPD
Trigger: GTCTGGCAGTGCAAAACCTCAGTATCTGTACATTTG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGATCCTGAGGTATAATTaGAGACTTCCAACCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKILRYN*RLPTSH
Trigger: ATGACTGGTTGGAAGTCTTCAATTATACCTCAGGAT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTAAAGCCTTCCATACATaGAGATATTCGCACCGACTC +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAKAFHT*RYSHRL
Trigger: GAGTCGGTGCGAATATCTTCATGTATGGAAGGCTTT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGGATCATCCTCTTCCTaGGGTGTTAATAACATGTTA +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAGSSSS*GVNNML
Trigger: TAACATGTTATTAACACCTCAGGAAGAGGATGATCC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTCTACCATTTCTTCCTaGTCCAGCAGATCACTCTCT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTASTISS*SSRSLS
Trigger: AGAGAGTGATCTGCTGGATCAGGAAGAAATGGTAGA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTGAAGGCTACAGTAGCTaGGAAATACTCTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAEGYSS*EILSGD
Trigger: ATCTCCTGAGAGTATTTCTCAGCTACTGTAGCCTTC...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGGCCTGGAACGTGTaGATGAGCTGCCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENWAWNV*MSCLCL
Trigger: CAGGCAAAGGCAGCTCATTCACACGTTCCAGGCCCA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATGGGCCTGGAACGTGTaGATGAGCTGCCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSWAWNV*MSCLCL
Trigger: CAGGCAAAGGCAGCTCATTCACACGTTCCAGGCCCA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTCACTTTTAAATGAATaGATTAGGCCATGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKSLLNE*IRPWPV
Trigger: GACAGGCCATGGCCTAATTCATTCATTTAAAAGTGA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCCGGGCTGGACAGAATaGGCGGGAGGTGCGACAAGC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQPGWTE*AGGATS
Trigger: GCTTGTCGCACCTCCCGCGCATTCTGTCCAGCCCGG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGCTTGACTTAACTCCTTaGTTGATACTACCACCTAGT +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKLDLTP*LILPPS
Trigger: ACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTCAAG...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTATGATCTTGCATTGCTaGCTCTTCTGCATTAGAACT +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAMILHC*LFCIRT
Trigger: AGTTCTAATGCAGAAGAGGCAGCAATGCAAGATCAT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGAGCAACTCTTATCTCTaGTTTCATCAAGCTCAGTAC +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKSNSYL*FHQAQY
Trigger: GTACTGAGCTTGATGAAAGCAGAGATAAGAGTTGCT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGTCCCCTCTCTGAATTaGTGGAATCATATTAATCAG +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAVPSLN*WNHINQ
Trigger: CTGATTAATATGATTCCAGCAATTCAGAGAGGGGAC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTGCCAGAACTTCCATTaGCATCACTCAGAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTACQNFH*HHSELL
Trigger: CAAAAGCTCTGAGTGATGGCAATGGAAGTTCTGGCA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGCATTTGACCATTCAATaGCAGAACTTCCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKHLTIQ*QNFHCH
Trigger: ATGGCAATGGAAGTTCTGGCATTGAATGGTCAAATG...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTGCTCTCGTTTGGCCTaGAATCTTCTTCTTTCTATT +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKCSRLA*NLLLSI
Trigger: AATAGAAAGAAGAAGATTGCAGGCCAAACGAGAGCA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTTTCGTCTTTCTGCATaGTCTCGTTTGGCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAFRLSA*SRLACN
Trigger: ATTGCAGGCCAAACGAGAGCATGCAGAAAGACGAAA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAGATCTTGGTTTTTCTaGAACCACGACTTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTARSWFF*NHDFRL
Trigger: AAGACGAAAGTCGTGGTTGCAGAAAAACCAAGATCT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTTGCGTGTTCTTCAATaGTTTCTGTCCTTAGTCTTC +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKLRVLQ*FLSLVF
Trigger: GAAGACTAAGGACAGAAAGCATTGAAGAACACGCAA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTCATGCATTGCTGTCTaGTCGGGCATTAATTCAGCA +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTASCIAV*SGINSA
Trigger: TGCTGAATTAATGCCCGACCAGACAGCAATGCATGA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTCGAGCAGTAGACTGTTaGCTCACAATATTAAACACT +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTARAVDC*LTILNT
Trigger: AGTGTTTAATATTGTGAGCCAACAGTCTACTGCTCG...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGCAAGACATACCTCTATaGCATCTTTCAATGAACCAG +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKQDIPL*HLSMNQ
Trigger: CTGGTTCATTGAAAGATGCCATAGAGGTATGTCTTG...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCTGCATGCTCTCGTTTaGCCTGCAATCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTALHALV*PAIFFF
Trigger: AAAGAAGAAGATTGCAGGCCAAACGAGAGCATGCAG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTCACATCTTCAATACTaGGATGAGGTGGTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTASHLQY*DEVVFS
Trigger: TGAAAACACCACCTCATCCCAGTATTGAAGATGTGA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTCACATCTTCAATACTaGGATGAGGTGGTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKSHLQY*DEVVFS
Trigger: TGAAAACACCACCTCATCCCAGTATTGAAGATGTGA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGCACTGGAGGAATTTGTaGCAAGAGCATGTATCAATA +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKHWRNL*QEHVSI
Trigger: TATTGATACATGCTCTTGCCACAAATTCCTCCAGTG...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGCGATTATTTAATGGGTaGGCTGCAAGCCGAAATAAT +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKRLFNG*AASRNN
Trigger: ATTATTTCGGCTTGCAGCCCACCCATTAAATAATCG...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCAAAGTCGTTTGACTaGAAATGCAGAAGAATCCCG +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAPKSFD*KCRRIP
Trigger: CGGGATTCTTCTGCATTTCCAGTCAAACGACTTTGG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTCTGCTATGCAGTTTTaGTTGACCTGCTCCACATGT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTASAMQF*LTCSTC
Trigger: ACATGTGGAGCAGGTCAACCAAAACTGCATAGCAGA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTGGGAAATGTGTCTTTaGACTTCATGCATTGCTGTC +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAWEMCL*TSCIAV
Trigger: GACAGCAATGCATGAAGTTCAAAGACACATTTCCCA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTTGTTGTTTAACCAATaGACTACAAAGCCCCCATTT +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTALLFNQ*TTKPPF
Trigger: AAATGGGGGCTTTGTAGTTCATTGGTTAAACAACAA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGCATCATCATTTTCATaGTCTACCTGCTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKASSFS*STCLSE
Trigger: TTCTGATAAGCAGGTAGATCATGAAAATGATGATGC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGCATCATCATTTTCATaGTCTACCTGCTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAASSFS*STCLSE
Trigger: TTCTGATAAGCAGGTAGATCATGAAAATGATGATGC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTGTAACAGCGTGTGGTaGGAATCTTTTGTCGCATTT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTACNSVW*ESFVAF
Trigger: AAATGCGACAAAAGATTCTCACCACACGCTGTTACA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGTGGCTGTGATCCGTaGGGACTGCCTACAGACATC +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENCGCDP*GLPTDI
Trigger: GATGTCTGTAGGCAGTCCTCACGGATCACAGCCACA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAGTTTACTGGCAGTTTaGAGATTGGCAATTGATGAA +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTASLLAV*RLAIDE
Trigger: TTCATCAATTGCCAATCTTCAAACTGCCAGTAAACT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTAGTTCTTCTCAGTTTTaGGACCTAAGGTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTASSSQF*DLRLPK
Trigger: CTTTGGCAACCTTAGGTCTCAAAACTGAGAAGAACT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGCTTGTAGCAAAAATTTaGGTTCCATCCTTACTGAAG +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKLVAKI*VPSLLK
Trigger: CTTCAGTAAGGATGGAACTCAAATTTTTGCTACAAG...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGTCTTCATCTTGGGCTaGACTCAAAAGATTAATAAG +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAVFILG*TQKINK
Trigger: CTTATTAATCTTTTGAGTTCAGCCCAAGATGAAGAC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTATGTTACCTTCTGCTaGACCTGTGGTAAAATATTC +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAYVTFC*TCGKIF
Trigger: GAATATTTTACCACAGGTTCAGCAGAAGGTAACATA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTATATATTTCACAGCCTaGACATCACATCTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAIYFTA*TSHLQR
Trigger: TCTCTGAAGATGTGATGTTCAGGCTGTGAAATATAT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAGCCGTTTCCCTCTGTaGCTCCCTCGGAAACCCGCC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQSRFPL*LPRKPA
Trigger: GGCGGGTTTCCGAGGGAGGCACAGAGGGAAACGGCT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251076.9
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCCGGGCTGGACAGAATaGGCGGGAGGTGCGACAAGC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYPGWTE*AGGATS
Trigger: GCTTGTCGCACCTCCCGCGCATTCTGTCCAGCCCGG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTATGACAGAGTGCATTTaGATGGTGGGAAATGTGTCT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAMTECI*MVGNVS
Trigger: AGACACATTTCCCACCATGCAAATGCACTCTGTCAT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTTTACTAAGAGAGCTTaGATCACCAGAGGGAAATGC +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAFTKRA*ITRGKC
Trigger: GCATTTCCCTCTGGTGATGCAAGCTCTCTTAGTAAA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTATGAAATGTACGAGTTaGTGCATTTCTAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAMKCTS*CISKRL
Trigger: CAACCTCTTAGAAATGCAGCAACTCGTACATTTCAT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGATGAAATGTACGAGTTaGTGCATTTCTAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKMKCTS*CISKRL
Trigger: CAACCTCTTAGAAATGCAGCAACTCGTACATTTCAT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGACATTGGTTGGTTATTaGGTCGAGTTCAATAATGCA +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKTLVGY*VEFNNA
Trigger: TGCATTATTGAACTCGACGCAATAACCAACCAATGT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCTGGTCTTCCCACAATaGTCACTGTACTGCTATTAT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTALVFPQ*SLYCYY
Trigger: ATAATAGCAGTACAGTGAGCATTGTGGGAAGACCAG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGAGAGTGCATCTGACTTaGTATACACAAACAGATTAC +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKRVHLT*YTQTDY
Trigger: GTAATCTGTTTGTGTATAGCAAGTCAGATGCACTCT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGCACTGTGCATATACATaGATTTCACAATCCATTCCT +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKHCAYT*ISQSIP
Trigger: AGGAATGGATTGTGAAATGCATGTATATGCACAGTG...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGAATTTGGATCTTGGTaGTCCTGTATTTGTGTATCT +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAEFGSW*SCICVS
Trigger: AGATACACAAATACAGGAGCACCAAGATCCAAATTC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTGTTTAACAAGGAAATaGCAAAGTCGTTTGACTGGA +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKCLTRK*QSRLTG
Trigger: TCCAGTCAAACGACTTTGGCATTTCCTTGTTAAACA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGCTTCAACCTCACTCTaGTTTCTTTTCTTAGTGAAA +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKASTSL*FLFLVK
Trigger: TTTCACTAAGAAAAGAAAGCAGAGTGAGGTTGAAGC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251076.9
ENST00000543779.6
CDS-3UTR GCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTTTCAGCGTGCCATCTaGACCACAGGAGAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENFQRAI*TTGEEP
Trigger: CGGCTCTTCTCCTGTGGTGCAGATGGCACGCTGAAA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACCCTGGTTTTCAGCGTaGCATCTGCACCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSPWFSA*HLHHRR
Trigger: TCTCCTGTGGTGCAGATGGCACGCTGAAAACCAGGG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCCCTGGTTTTCAGCGTaGCATCTGCACCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENPWFSA*HLHHRR
Trigger: TCTCCTGTGGTGCAGATGGCACGCTGAAAACCAGGG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACTCCGGAGCCCGGGCTaGACAGAATGCGCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLRSPG*TECAGG
Trigger: ACCTCCCGCGCATTCTGTCCAGCCCGGGCTCCGGAG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCCACTGTAAGAATGTaGGAGCCATCTTCTTTTGAT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAPTVRM*EPSSFD
Trigger: ATCAAAAGAAGATGGCTCCCACATTCTTACAGTGGG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTCCCTCTCTGAATTGCTaGAATCATATTAATCAGTTC +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTAPSLNC*NHINQF
Trigger: GAACTGATTAATATGATTCCAGCAATTCAGAGAGGG...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTTACTTTTGGAATTTTaGAGAGTACCTCCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTALLLEF*RVPPRL
Trigger: TAGCCTTGGAGGTACTCTCCAAAATTCCAAAAGTAA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAATACTGGGATGAGGTaGTGTTTTCATCTGAACAAT +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTANTGMR*CFHLNN
Trigger: ATTGTTCAGATGAAAACACCACCTCATCCCAGTATT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCAAAATGTTCAGTTTTaGCTGGTCTTCATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAQNVQF*LVFILG
Trigger: GCCCAAGATGAAGACCAGCCAAAACTGAACATTTTG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATGCAGGCACCGGTGGTaGGGTAGCATCTTTTACAGG +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSCRHRW*GSIFYR
Trigger: CCTGTAAAAGATGCTACCCCACCACCGGTGCCTGCA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTTTTTCTTTGTAAGATaGTCTTTCTGCAGGCACCGG +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAFFFVR*SFCRHR
Trigger: CCGGTGCCTGCAGAAAGACCATCTTACAAAGAAAAA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGATATCAGATTCCTTATaGATGACTTTCGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKISDSL*MTFAFP
Trigger: TGGAAAGGCGAAAGTCATCCATAAGGAATCTGATAT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGCTCCGGTGAGGACCTaGTGCAGATGCATCTCCGGA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQAPVRT*CRCISG
Trigger: TCCGGAGATGCATCTGCATCAGGTCCTCACCGGAGC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTAAAGTGACTGCCCACTaGTTTAAAGAACCATCTATG +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAKVTAH*FKEPSM
Trigger: CATAGATGGTTCTTTAAATCAGTGGGCAGTCACTTT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTAAGCAACTGTGTATTTaGGCCACATTGGTTGGTTAT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAKQLCI*ATLVGY
Trigger: ATAACCAACCAATGTGGCTCAAATACACAGTTGCTT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGTCGACGCTGACCCTTaGATCAAGTACACTCCCAAC +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENVDADP*IKYTPN
Trigger: GTTGGGAGTGTACTTGATTCAAGGGTCAGCGTCGAC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTAAGAAGAACCCATCTTaGCTTAACTCCTTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAKKNPS*LNSLLD
Trigger: ATCAAGCAAGGAGTTAAGTCAAGATGGGTTCTTCTT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTTGATGGACTGGGTGTaGAGTCATTCTCTTAACATT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTALMDWV*SHSLNI
Trigger: AATGTTAAGAGAATGACTTCACACCCAGTCCATCAA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAAAGCAGACAAGTTGCTaGGGCCGCGTCCATTCAAAC +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSKQTSC*GRVHSN
Trigger: GTTTGAATGGACGCGGCCTCAGCAACTTGTCTGCTT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTCACTTTTAAATGAATaGATTAGGCCATGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTASLLNE*IRPWPV
Trigger: GACAGGCCATGGCCTAATTCATTCATTTAAAAGTGA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGCACCGGCGCACAAATaGGGGAGGGCAAGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYAPAHK*GRARVL
Trigger: AAGCACCCTTGCCCTCCCGCATTTGTGCGCCGGTGC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251076.9
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGGGTCGCCGCTCAGCTaGGGAAATGCCCGGATGTTC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYGSPLS*GNARMF
Trigger: GAACATCCGGGCATTTCCGCAGCTGAGCGGCGACCC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251076.9
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGGACATCCCCGACGCTaGCCACGGAGTAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQGHPRR*PRSSSC
Trigger: ACAACTGCTACTCCGTGGGCAGCGTCGGGGATGTCC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCAAATTTGACAGCATaGTTCCACTGTGCATATACA +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAPNLTA*FHCAYT
Trigger: TGTATATGCACAGTGGAAGCATGCTGTCAAATTTGG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTGCTCTCGTTTGGCCTaGAATCTTCTTCTTTCTATT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTACSRLA*NLLLSI
Trigger: AATAGAAAGAAGAAGATTGCAGGCCAAACGAGAGCA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTAGATCTTGGTTTTTCTaGAACCACGACTTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTARSWFF*NHDFRL
Trigger: AAGACGAAAGTCGTGGTTGCAGAAAAACCAAGATCT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTTGCGTGTTCTTCAATaGTTTCTGTCCTTAGTCTTC +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTALRVLQ*FLSLVF
Trigger: GAAGACTAAGGACAGAAAGCATTGAAGAACACGCAA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAGGAAGAAATGGCTTTaGAACAAAATAATCCCACAT +
Preference number: 4 (lower is better)
Translates to: METASHSRELVTAHCSTARKKWL*NKIIPH
Trigger: ATGTGGGATTATTTTGTTGCAAAGCCATTTCTTCCT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGTGATGACTGTAGTGTaGCTTTTAACTGAAATGTAT +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKVMTVV*LLTEMY
Trigger: ATACATTTCAGTTAAAAGGCACACTACAGTCATCAC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTATTACACTCTGGGTTaGCTTCCATACAACATTTCC +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAYYTLG*LPYNIS
Trigger: GGAAATGTTGTATGGAAGCCAACCCAGAGTGTAATA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGTTTATCTTTTTCCCTaGCATCTGTACTTTTCATCA +
Preference number: 4 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKVYLFP*HLYFSS
Trigger: TGATGAAAAGTACAGATGCCAGGGAAAAAGATAAAC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATTCTGCAGGCACCGGTaGTGGGGTAGCATCTTTTAC +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSFCRHR*WGSIFY
Trigger: GTAAAAGATGCTACCCCACCACCGGTGCCTGCAGAA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGGAGGAGCCCACAACTaGATAGAATCAGTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENGGAHN*IESVAV
Trigger: GACAGCAACTGATTCTATTCAGTTGTGGGCTCCTCC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAGACAGTAACTGGGAATaGGAGTTGGAAGCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSDSNWE*ELEAKP
Trigger: TGGCTTGGCTTCCAACTCTCATTCCCAGTTACTGTC...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACAAGGCGACCTGTGTATaGACAGCTAACAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENKATCV*TANSNW
Trigger: CCAGTTGCTGTTAGCTGTTCATACACAGGTCGCCTT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTAATAAGCCACCATCTTaGATTACAGTTGGTGAACAA +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTANKPPS*ITVGEQ
Trigger: TTGTTCACCAACTGTAATTCAAGATGGTGGCTTATT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCATCCAACTTTAAAATaGGCATTTGCAGTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAHPTLK*AFAVVK
Trigger: CTTTACCACTGCAAATGCTCATTTTAAAGTTGGATG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCTTGTAGCAAAAATTTaGGTTCCATCCTTACTGAAG +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTALVAKI*VPSLLK
Trigger: CTTCAGTAAGGATGGAACTCAAATTTTTGCTACAAG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACTCACACCAGGCCATTaGGCAGGAGATGAATTTGGT +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSLTPGH*AGDEFG
Trigger: ACCAAATTCATCTCCTGCTCAATGGCCTGGTGTGAG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCCAGCTCCCACTaGAAGGTCAGTTGGATATGT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENWSSSH*KVSWIC
Trigger: ACATATCCAACTGACCTTTCAGTGGGAGCTGGACCA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCTTGCATTGCCAGCTTaGCGAAAGCAGACAAGTTGC +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENLALPA*RKQTSC
Trigger: GCAACTTGTCTGCTTTCGTCAAGCTGGCAATGCAAG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTGGGCCTGGAACGTGTaGATGAGCTGCCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQWAWNV*MSCLCL
Trigger: CAGGCAAAGGCAGCTCATTCACACGTTCCAGGCCCA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTATATATTTCACAGCCTaGACATCACATCTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAIYFTA*TSHLQR
Trigger: TCTCTGAAGATGTGATGTTCAGGCTGTGAAATATAT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGTTCCCACTGCCTGCTaGACCGGCGCACAAATGCGG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTVPTAC*TGAQMR
Trigger: CCGCATTTGTGCGCCGGTGCAGCAGGCAGTGGGAAC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251076.9
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCACTGTGCATATACATaGATTTCACAATCCATTCCT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAHCAYT*ISQSIP
Trigger: AGGAATGGATTGTGAAATGCATGTATATGCACAGTG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAGCTACAAGGAACATCTaGTCCAAACGGGTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSATRNI*SKRVRP
Trigger: AGGCCTTACCCGTTTGGAGCAGATGTTCCTTGTAGC...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCGACTTTCGTCTTTCTaGATGCTCTCGTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENRLSSF*MLSFGL
Trigger: CAGGCCAAACGAGAGCATGCAGAAAGACGAAAGTCG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTGAATTTGGATCTTGGTaGTCCTGTATTTGTGTATCT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAEFGSW*SCICVS
Trigger: AGATACACAAATACAGGAGCACCAAGATCCAAATTC...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTGTTTAACAAGGAAATaGCAAAGTCGTTTGACTGGA +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTACLTRK*QSRLTG
Trigger: TCCAGTCAAACGACTTTGGCATTTCCTTGTTAAACA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAAACAGAGGAGGAGACTaGAGGCATGCTTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSNRGGD*RHASVS
Trigger: ACTGACTGAAGCATGCCTGCAGTCTCCTCCTCTGTT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCAGAACCGTAGGCAGTaGCATTGGTACACTAAGTCG +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENQNRRQ*HWYTKS
Trigger: CGACTTAGTGTACCAATGCCACTGCCTACGGTTCTG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGAAGAAGAACTCAGATaGCCTGCTGAAGGCGTTGCT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENEEELR*PAEGVA
Trigger: AGCAACGCCTTCAGCAGGCCATCTGAGTTCTTCTTC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCCTCTCTGAATTGCTaGAATCATATTAATCAGTTC +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAPSLNC*NHINQF
Trigger: GAACTGATTAATATGATTCCAGCAATTCAGAGAGGG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTTACTTTTGGAATTTTaGAGAGTACCTCCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTALLLEF*RVPPRL
Trigger: TAGCCTTGGAGGTACTCTCCAAAATTCCAAAAGTAA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTAATACTGGGATGAGGTaGTGTTTTCATCTGAACAAT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTANTGMR*CFHLNN
Trigger: ATTGTTCAGATGAAAACACCACCTCATCCCAGTATT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTTTCGCCTTTCCACCTaGATAGCCCAGATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENFRLST*IAQISF
Trigger: GAAGCTGATCTGGGCTATCCAGGTGGAAAGGCGAAA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATTTCGCCTTTCCACCTaGATAGCCCAGATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSFRLST*IAQISF
Trigger: GAAGCTGATCTGGGCTATCCAGGTGGAAAGGCGAAA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCATTGGGCAAAACCCTaGTTTTCAGCGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENHWAKP*FSACHL
Trigger: CAGATGGCACGCTGAAAACCAGGGTTTTGCCCAATG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGCTCCGGTGAGGACCTaGTGCAGATGCATCTCCGGA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTAPVRT*CRCISG
Trigger: TCCGGAGATGCATCTGCATCAGGTCCTCACCGGAGC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACAACAATATCACAGCCTaGTCCATATGCCGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENNNITA*SICREG
Trigger: CCCTTCACGGCATATGGATCAGGCTGTGATATTGTT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAGATTACTGTCGACGCTaGCCCTTGAATCAAGTACAC +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSDYCRR*PLNQVH
Trigger: GTGTACTTGATTCAAGGGTCAGCGTCGACAGTAATC...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGAGAGAAACAGGCAGTaGAGGAGTACCATCAACAGA +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENERNRQ*RSTINR
Trigger: TCTGTTGATGGTACTCCTTCACTGCCTGTTTCTCTC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTTTGCAACTGAATCCTaGGCCATCCTTTTGGCAACC +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENFATES*AILLAT
Trigger: GGTTGCCAAAAGGATGGCTCAGGATTCAGTTGCAAA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATCTAAGGCACTGTCGTaGTCTTCACCCCAATCAAGA +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSSKALS*SSPQSR
Trigger: TCTTGATTGGGGTGAAGATCACGACAGTGCCTTAGA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCAGATTCCTTATGGATaGCTTTCGCCTTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENQIPYG*LSPFHL
Trigger: CAGGTGGAAAGGCGAAAGTCATCCATAAGGAATCTG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGATGTTCCCACTGCCTaGTGCACCGGCGCACAAATG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYDVPTA*CTGAQM
Trigger: CATTTGTGCGCCGGTGCAGCAGGCAGTGGGAACATC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251076.9
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGCTCAGCTGCGGAAATaGCCGGATGTTCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTAQLRK*PDVPTA
Trigger: GGCAGTGGGAACATCCGGGCATTTCCGCAGCTGAGC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251076.9
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTATCATCAACATTAAATaGAGTGCCAACCAAGACATT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAIINIK*SANQDI
Trigger: AATGTCTTGGTTGGCACTGCATTTAATGTTGATGAT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGTGATCCGTGAGGACTaGCTACAGACATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQVIRED*LQTSPP
Trigger: AGGAGGGGATGTCTGTAGGCAGTCCTCACGGATCAC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTAAATGTACGAGTTGCTaGATTTCTAAGAGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAKCTSC*ISKRLF
Trigger: AAACAACCTCTTAGAAATGCAGCAACTCGTACATTT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTGTTATAAAAACTAAATaGCACCGGGTTACAAGACTT +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAVIKTK*HRVTRL
Trigger: AAGTCTTGTAACCCGGTGGCATTTAGTTTTTATAAC...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATGGATGATGTCAATCTaGATGACTCCAGCCCCAATG +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSWMMSI*MTPAPM
Trigger: CATTGGGGCTGGAGTCATGCAGATTGACATCATCCA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGATGATGTCAATCTaGATGACTCCAGCCCCAATG +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENWMMSI*MTPAPM
Trigger: CATTGGGGCTGGAGTCATGCAGATTGACATCATCCA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCCCTGGTTTTCAGCGTaGCATCTGCACCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQPWFSA*HLHHRR
Trigger: TCTCCTGTGGTGCAGATGGCACGCTGAAAACCAGGG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAGGGAGATCAAGGGGTTaGCTATACACCAGTCTAGAA +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSGRSRG*LYTSLE
Trigger: TTCTAGACTGGTGTATAGCCAACCCCTTGATCTCCC...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTTTGAAAAGAAGCTTTaGCAACCTTTTCAATGCATC +
Preference number: 4 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAFEKKL*QPFQCI
Trigger: GATGCATTGAAAAGGTTGCCAAAGCTTCTTTTCAAA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAATGCAAAGTCACTTGTaGCTTTACTGTGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSMQSHL*LYCGTA
Trigger: GGCAGTGCCACAGTAAAGCCACAAGTGACTTTGCAT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTTAGGAGTTGCTGTTTaGGTGCATACTGCAGTACCG +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENLGVAV*VHTAVP
Trigger: CGGTACTGCAGTATGCACCCAAACAGCAACTCCTAA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAAAGAGCCGATTGCCCTaGATGATGTCAATCTGCATG +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSKSRLP*MMSICM
Trigger: CATGCAGATTGACATCATCCAGGGCAATCGGCTCTT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCTCACAGCAGAGAACTaGTCACTGCGCACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQLTAEN*SLRTAP
Trigger: TGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTTCAGCAGGAAAGAATaGAAACGGCCTCTCACAGCA +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENFSRKE*KRPLTA
Trigger: TGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCAAATGTACAGATACTaGGGTTTTGCACTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENQMYRY*GFALPD
Trigger: GTCTGGCAGTGCAAAACCTCAGTATCTGTACATTTG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACGGCACACACCATCATaGCATGAAGTTAACAACACA +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSRHTPS*HEVNNT
Trigger: TGTGTTGTTAACTTCATGTCATGATGGTGTGTGCCG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTACACTAAGTCGTaGGTAAGTTCTAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENWYTKS*VSSRTS
Trigger: GGAAGTCCTAGAACTTACTCACGACTTAGTGTACCA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTGTGGCTGTGATCCGTaGGGACTGCCTACAGACATC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYCGCDP*GLPTDI
Trigger: GATGTCTGTAGGCAGTCCTCACGGATCACAGCCACA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGACATGCCAGGTCATTaGGGTGAAATCGATGACCGC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQDMPGH*GEIDDR
Trigger: GCGGTCATCGATTTCACCTCAATGACCTGGCATGTC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAAGTGGTAAAACTGAATaGCATGCCAGGTCATTGAGG +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSSGKTE*HARSLR
Trigger: CCTCAATGACCTGGCATGTCATTCAGTTTTACCACT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGCTCAAGAGTGCATCTaGCTTGCTATACACAAACAG +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENAQECI*LAIHKQ
Trigger: CTGTTTGTGTATAGCAAGTCAGATGCACTCTTGAGC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATCTACCATTTCTTCCTaGTCCAGCAGATCACTCTCT +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSSTISS*SSRSLS
Trigger: AGAGAGTGATCTGCTGGATCAGGAAGAAATGGTAGA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAGGTGGACCTTCAAACTaGTCCATTTTCTCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSGGPSN*SIFSCK
Trigger: CTTGCAAGAGAAAATGGATCAGTTTGAAGGTCCACC...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCAGCCATGGCAGAGATaGAGGTGGATGCACCTGACT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYQPWQR*RWMHLT
Trigger: AGTCAGGTGCATCCACCTTCATCTCTGCCATGGCTG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAAGCAGACAAGTTGCTaGGGCCGCGTCCATTCAAAC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQKQTSC*GRVHSN
Trigger: GTTTGAATGGACGCGGCCTCAGCAACTTGTCTGCTT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTGGCACGTGAAACCATaGATGAGGCTGTTTCCGGGT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQWHVKP*MRLFPG
Trigger: ACCCGGAAACAGCCTCATTCATGGTTTCACGTGCCA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAGTACCGTGGCACCATaGTCGTGGCACGTGAAACCA +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYSTVAP*SWHVKP
Trigger: TGGTTTCACGTGCCACGATCATGGTGCCACGGTACT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACACTGAGGTTTTGCACTaGCAGACACACTTCCAATCA +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENTEVLH*QTHFQS
Trigger: TGATTGGAAGTGTGTCTGGCAGTGCAAAACCTCAGT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAATCACCAGAGGGAAATaGAACAGGAATCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSITRGK*NRNPRR
Trigger: TCTTCTCGGATTCCTGTTGCATTTCCCTCTGGTGAT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACAGTGGAGACTGGAGCTaGTTTACTGTAGTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENSGDWS*FTVVSC
Trigger: ACAGGAAACTACAGTAAAGCAGCTCCAGTCTCCACT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGTAAGATGGTCTTTCTaGAGGCACCGGTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYVRWSF*RHRWWG
Trigger: ACCCCACCACCGGTGCCTGCAGAAAGACCATCTTAC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATCGTTTGACTGGAAATaGAGAAGAATCCCGGGACTT +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSSFDWK*RRIPGL
Trigger: AAGTCCCGGGATTCTTCTGCATTTCCAGTCAAACGA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGAGTTGCTGTTTGGGTaGATACTGCAGTACCGTGGC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQELLFG*ILQYRG
Trigger: GCCACGGTACTGCAGTATGCACCCAAACAGCAACTC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTTTCAGCGTGCCATCTaGACCACAGGAGAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYFQRAI*TTGEEP
Trigger: CGGCTCTTCTCCTGTGGTGCAGATGGCACGCTGAAA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACAGAATATCATCTCCTaGAGGAGCCCACAACTGAAT +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSQNIIS*RSPQLN
Trigger: ATTCAGTTGTGGGCTCCTCCAGGAGATGATATTCTG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCAGAATATCATCTCCTaGAGGAGCCCACAACTGAAT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENQNIIS*RSPQLN
Trigger: ATTCAGTTGTGGGCTCCTCCAGGAGATGATATTCTG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGCCAACCAAGACATTTaGAATATCTGTGGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENANQDI*NICGRV
Trigger: AACCCTGCCACAGATATTCCAAATGTCTTGGTTGGC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCATACTGCAGTACCGTaGCACCATGATCGTGGCACG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYHTAVP*HHDRGT
Trigger: CGTGCCACGATCATGGTGCCACGGTACTGCAGTATG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGGAAATGTGTCTTTaGACTTCATGCATTGCTGTC +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENWEMCL*TSCIAV
Trigger: GACAGCAATGCATGAAGTTCAAAGACACATTTCCCA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTTCTCTATCCTCCTGTaGATGTTCCTCATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENFSILL*MFLIFS
Trigger: AGAGAAGATGAGGAACATTCACAGGAGGATAGAGAA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGTAACAGCGTGTGGTaGGAATCTTTTGTCGCATTT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENCNSVW*ESFVAF
Trigger: AAATGCGACAAAAGATTCTCACCACACGCTGTTACA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGACATGCCAGGTCATTaGGGTGAAATCGATGACCGC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYDMPGH*GEIDDR
Trigger: GCGGTCATCGATTTCACCTCAATGACCTGGCATGTC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAATTGCATTTGGGTCATaGAATGTACGAGTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSIAFGS*NVRVAA
Trigger: TGCAGCAACTCGTACATTTCATGACCCAAATGCAAT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGACAGTAACTGGGAATaGGAGTTGGAAGCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQDSNWE*ELEAKP
Trigger: TGGCTTGGCTTCCAACTCTCATTCCCAGTTACTGTC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCTCAGTCACAATTCCTaGAAGCCTTCCATACATGAA +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENLSHNS*KPSIHE
Trigger: TTCATGTATGGAAGGCTTTCAGGAATTGTGACTGAG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGATTTGAAACAGCTCTaGATACTGATCCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENDLKQL*ILILWL
Trigger: CAACCAGAGGATCAGTATTCAGAGCTGTTTCAAATC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGTGCATAAGATGACTTaGAAGTACCCTTGCATGTTC +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENVHKMT*KYPCMF
Trigger: GAACATGCAAGGGTACTTTCAAGTCATCTTATGCAC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCTTGAGTGCATAAGATaGCTTGAAAGTACCCTTGCA +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENLECIR*LESTLA
Trigger: TGCAAGGGTACTTTCAAGTCATCTTATGCACTCAAG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGGGTCTGAGGCCTTCTaGTCTGATTGTTTATCTTTT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENGSEAF*SDCLSF
Trigger: AAAAGATAAACAATCAGATCAGAAGGCCTCAGACCC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGAGTTCCATCCTTACTaGAGCCAAACCACCACCTTG +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQEFHPY*SQTTTL
Trigger: CAAGGTGGTGGTTTGGCTTCAGTAAGGATGGAACTC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTGGTCCAGCTCCCACTaGAAGGTCAGTTGGATATGT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQWSSSH*KVSWIC
Trigger: ACATATCCAACTGACCTTTCAGTGGGAGCTGGACCA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACATCCATATGTATGACTaGCAGGCCAGTAGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENIHMYD*QASREV
Trigger: TACTTCTCTACTGGCCTGTCAGTCATACATATGGAT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCCATGGCAGAGATaGAGGTGGATGCACCTGACT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTQPWQR*RWMHLT
Trigger: AGTCAGGTGCATCCACCTTCATCTCTGCCATGGCTG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAGTACCGTGGCACCATaGTCGTGGCACGTGAAACCA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTSTVAP*SWHVKP
Trigger: TGGTTTCACGTGCCACGATCATGGTGCCACGGTACT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACACTTGGATGTTTCCATaGTTAGCACCAGGAATGATC +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENTWMFP*LAPGMI
Trigger: GATCATTCCTGGTGCTAAGCATGGAAACATCCAAGT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGTAGTCTCACAAATCTaGTCACCCAAAAGACAGTCT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENVVSQI*SPKRQS
Trigger: AGACTGTCTTTTGGGTGAGCAGATTTGTGAGACTAC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCAGCATGAGAAAGGCTaGTGGCAATGCTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYQHEKG*WQCWKW
Trigger: CCACTTCCAGCATTGCCAGCAGCCTTTCTCATGCTG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACATGACAGAGTGCATTTaGATGGTGGGAAATGTGTCT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENMTECI*MVGNVS
Trigger: AGACACATTTCCCACCATGCAAATGCACTCTGTCAT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGTGATCCGTGAGGACTaGCTACAGACATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTVIRED*LQTSPP
Trigger: AGGAGGGGATGTCTGTAGGCAGTCCTCACGGATCAC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAAACAAAGCAAGCACTTaGAGAATTGCAGTATGTGCC +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSNKAST*RIAVCA
Trigger: GGCACATACTGCAATTCTGCAAGTGCTTGCTTTGTT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCGAATGATCTTGCATTaGTGCCTCTTCTGCATTAGA +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENRMILH*CLFCIR
Trigger: TCTAATGCAGAAGAGGCAGCAATGCAAGATCATTCG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCGACTTTCGTCTTTCTaGATGCTCTCGTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQRLSSF*MLSFGL
Trigger: CAGGCCAAACGAGAGCATGCAGAAAGACGAAAGTCG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGTAAGATGGTCTTTCTaGAGGCACCGGTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTVRWSF*RHRWWG
Trigger: ACCCCACCACCGGTGCCTGCAGAAAGACCATCTTAC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAGCAGTTTGGTTAACTTaGCAGATACTCAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSAVWLT*QILRKP
Trigger: GGGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGC...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCCCGAGATTAGGAGTTaGTGTTTGGGTGCATACTGC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQPEIRS*CLGAYC
Trigger: GCAGTATGCACCCAAACAGCAACTCCTAATCTCGGG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACCCTGGTTTTCAGCGTaGCATCTGCACCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTPWFSA*HLHHRR
Trigger: TCTCCTGTGGTGCAGATGGCACGCTGAAAACCAGGG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAACAGAGGAGGAGACTaGAGGCATGCTTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQNRGGD*RHASVS
Trigger: ACTGACTGAAGCATGCCTGCAGTCTCCTCCTCTGTT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGCAATTCTTCCTTGTTaGTTAGAACACTCCACACAG +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENAILPC*LEHSTQ
Trigger: CTGTGTGGAGTGTTCTAACCAACAAGGAAGAATTGC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCAGAACCGTAGGCAGTaGCATTGGTACACTAAGTCG +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQQNRRQ*HWYTKS
Trigger: CGACTTAGTGTACCAATGCCACTGCCTACGGTTCTG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATTCATATGTGTACTGTaGGATCTAGAGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSFICVL*DLECGC
Trigger: ACAGCCACACTCTAGATCCCACAGTACACATATGAA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTTCATATGTGTACTGTaGGATCTAGAGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENFICVL*DLECGC
Trigger: ACAGCCACACTCTAGATCCCACAGTACACATATGAA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATTGAGCCACATTGGTTaGTTATTGCGTCGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSLSHIG*LLRRVQ
Trigger: TTGAACTCGACGCAATAACCAACCAATGTGGCTCAA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGTATTTGAGCCACATTaGTTGGTTATTGCGTCGAGT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENVFEPH*LVIASS
Trigger: ACTCGACGCAATAACCAACCAATGTGGCTCAAATAC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGAAGAAGAACTCAGATaGCCTGCTGAAGGCGTTGCT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQEEELR*PAEGVA
Trigger: AGCAACGCCTTCAGCAGGCCATCTGAGTTCTTCTTC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCTCCATCCTTACTGTTaGTTTGCTCAGTCACAATTC +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENLHPYC*FAQSQF
Trigger: GAATTGTGACTGAGCAAACCAACAGTAAGGATGGAG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGGCTGGTCTTCATCTTaGGCTGAACTCAAAAGATTA +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENGWSSS*AELKRL
Trigger: TAATCTTTTGAGTTCAGCCCAAGATGAAGACCAGCC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCAAAATGTTCAGTTTTaGCTGGTCTTCATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENQNVQF*LVFILG
Trigger: GCCCAAGATGAAGACCAGCCAAAACTGAACATTTTG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATGCAGGCACCGGTGGTaGGGTAGCATCTTTTACAGG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTCRHRW*GSIFYR
Trigger: CCTGTAAAAGATGCTACCCCACCACCGGTGCCTGCA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTTCTGCAGGCACCGGTaGTGGGGTAGCATCTTTTAC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYFCRHR*WGSIFY
Trigger: GTAAAAGATGCTACCCCACCACCGGTGCCTGCAGAA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCCAGCTATAGGAATTTaGATCTTGGTGCTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENPAIGI*ILVLLY
Trigger: ATACAGGAGCACCAAGATCCAAATTCCTATAGCTGG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAGATATAGTTAGGGGGTaGACCTTCAAACTGATCCAT +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSDIVRG*TFKLIH
Trigger: ATGGATCAGTTTGAAGGTCCACCCCCTAACTATATC...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACATACTGCAGTACCGTaGCACCATGATCGTGGCACG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTHTAVP*HHDRGT
Trigger: CGTGCCACGATCATGGTGCCACGGTACTGCAGTATG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCATTGGGCAAAACCCTaGTTTTCAGCGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQHWAKP*FSACHL
Trigger: CAGATGGCACGCTGAAAACCAGGGTTTTGCCCAATG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACTCACAGCAGAGAACTaGTCACTGCGCACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLTAEN*SLRTAP
Trigger: TGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGGAGGAGCCCACAACTaGATAGAATCAGTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYGGAHN*IESVAV
Trigger: GACAGCAACTGATTCTATTCAGTTGTGGGCTCCTCC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAAAAGTGACTGCCCACTaGTTTAAAGAACCATCTATG +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSKVTAH*FKEPSM
Trigger: CATAGATGGTTCTTTAAATCAGTGGGCAGTCACTTT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACAAAGTGACTGCCCACTaGTTTAAAGAACCATCTATG +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENKVTAH*FKEPSM
Trigger: CATAGATGGTTCTTTAAATCAGTGGGCAGTCACTTT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGACATGCCAGGTCATTaGGGTGAAATCGATGACCGC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTDMPGH*GEIDDR
Trigger: GCGGTCATCGATTTCACCTCAATGACCTGGCATGTC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTACTCCTCCAGTGTATaGCAAAGGTCCTATTGGGTC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQYSSSV*QRSYWV
Trigger: GACCCAATAGGACCTTTGTCATACACTGGAGGAGTA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGACAGTAACTGGGAATaGGAGTTGGAAGCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYDSNWE*ELEAKP
Trigger: TGGCTTGGCTTCCAACTCTCATTCCCAGTTACTGTC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATACTCAGATGGCCTGCTaGAGGCGTTGCTCTTATTAC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYTQMAC*RRCSYY
Trigger: GTAATAAGAGCAACGCCTTCAGCAGGCCATCTGAGT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGTCGACGCTGACCCTTaGATCAAGTACACTCCCAAC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTVDADP*IKYTPN
Trigger: GTTGGGAGTGTACTTGATTCAAGGGTCAGCGTCGAC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGATTACTGTCGACGCTaGCCCTTGAATCAAGTACAC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQDYCRR*PLNQVH
Trigger: GTGTACTTGATTCAAGGGTCAGCGTCGACAGTAATC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACAAGAAGAACCCATCTTaGCTTAACTCCTTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENKKNPS*LNSLLD
Trigger: ATCAAGCAAGGAGTTAAGTCAAGATGGGTTCTTCTT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCAGTGTCTCCAAATTTaGCAGCATGCTTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQQCLQI*QHASTV
Trigger: CACAGTGGAAGCATGCTGTCAAATTTGGAGACACTG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTTTGCAACTGAATCCTaGGCCATCCTTTTGGCAACC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQFATES*AILLAT
Trigger: GGTTGCCAAAAGGATGGCTCAGGATTCAGTTGCAAA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGTAATCTTTTGCAACTaGATCCTGAGCCATCCTTTT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENVIFCN*ILSHPF
Trigger: AAAAGGATGGCTCAGGATTCAGTTGCAAAAGATTAC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAGTAATCTTTTGCAACTaGATCCTGAGCCATCCTTTT +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSVIFCN*ILSHPF
Trigger: AAAAGGATGGCTCAGGATTCAGTTGCAAAAGATTAC...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAAATGCCAAAGTCGTTTaGCTGGAAATGCAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSNAKVV*LEMQKN
Trigger: ATTCTTCTGCATTTCCAGTCAAACGACTTTGGCATT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCAGATTCCTTATGGATaGCTTTCGCCTTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQQIPYG*LSPFHL
Trigger: CAGGTGGAAAGGCGAAAGTCATCCATAAGGAATCTG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTTGATGGACTGGGTGTaGAGTCATTCTCTTAACATT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENLMDWV*SHSLNI
Trigger: AATGTTAAGAGAATGACTTCACACCCAGTCCATCAA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAAGCAGACAAGTTGCTaGGGCCGCGTCCATTCAAAC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTKQTSC*GRVHSN
Trigger: GTTTGAATGGACGCGGCCTCAGCAACTTGTCTGCTT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCTTGCATTGCCAGCTTaGCGAAAGCAGACAAGTTGC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYLALPA*RKQTSC
Trigger: GCAACTTGTCTGCTTTCGTCAAGCTGGCAATGCAAG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATGGCACGTGAAACCATaGATGAGGCTGTTTCCGGGT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTWHVKP*MRLFPG
Trigger: ACCCGGAAACAGCCTCATTCATGGTTTCACGTGCCA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCATGAGAAAGGCTaGTGGCAATGCTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTQHEKG*WQCWKW
Trigger: CCACTTCCAGCATTGCCAGCAGCCTTTCTCATGCTG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACCAAATTTGACAGCATaGTTCCACTGTGCATATACA +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSPNLTA*FHCAYT
Trigger: TGTATATGCACAGTGGAAGCATGCTGTCAAATTTGG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGCTACAAGGAACATCTaGTCCAAACGGGTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYATRNI*SKRVRP
Trigger: AGGCCTTACCCGTTTGGAGCAGATGTTCCTTGTAGC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAGTCCCCTCTCTGAATTaGTGGAATCATATTAATCAG +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSVPSLN*WNHINQ
Trigger: CTGATTAATATGATTCCAGCAATTCAGAGAGGGGAC...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCATTTGACCATTCAATaGCAGAACTTCCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENHLTIQ*QNFHCH
Trigger: ATGGCAATGGAAGTTCTGGCATTGAATGGTCAAATG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACATTTGACCATTCAATaGCAGAACTTCCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSHLTIQ*QNFHCH
Trigger: ATGGCAATGGAAGTTCTGGCATTGAATGGTCAAATG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAAGATCTTGGTTTTTCTaGAACCACGACTTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSRSWFF*NHDFRL
Trigger: AAGACGAAAGTCGTGGTTGCAGAAAAACCAAGATCT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACTTAGAAAGCAGAATTaGCTAGTGATGACTGTAGTG +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSLRKQN*LVMTVV
Trigger: CACTACAGTCATCACTAGGCAATTCTGCTTTCTAAG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCTTAGAAAGCAGAATTaGCTAGTGATGACTGTAGTG +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENLRKQN*LVMTVV
Trigger: CACTACAGTCATCACTAGGCAATTCTGCTTTCTAAG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACGAGCAGTAGACTGTTaGCTCACAATATTAAACACT +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSRAVDC*LTILNT
Trigger: AGTGTTTAATATTGTGAGCCAACAGTCTACTGCTCG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACACTAGGAGAGGTTTCTaGAGAAGAATCTACGTTCTT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENTRRGF*RRIYVL
Trigger: AAGAACGTAGATTCTTCTCCAGAAACCTCTCCTAGT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCAAGACATACCTCTATaGCATCTTTCAATGAACCAG +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENQDIPL*HLSMNQ
Trigger: CTGGTTCATTGAAAGATGCCATAGAGGTATGTCTTG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACAAGACATACCTCTATaGCATCTTTCAATGAACCAG +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSQDIPL*HLSMNQ
Trigger: CTGGTTCATTGAAAGATGCCATAGAGGTATGTCTTG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACACTGGAGGAATTTGTaGCAAGAGCATGTATCAATA +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSHWRNL*QEHVSI
Trigger: TATTGATACATGCTCTTGCCACAAATTCCTCCAGTG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACGATTATTTAATGGGTaGGCTGCAAGCCGAAATAAT +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSRLFNG*AASRNN
Trigger: ATTATTTCGGCTTGCAGCCCACCCATTAAATAATCG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATTCTGCAGGCACCGGTaGTGGGGTAGCATCTTTTAC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTFCRHR*WGSIFY
Trigger: GTAAAAGATGCTACCCCACCACCGGTGCCTGCAGAA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAAGAGCCGATTGCCCTaGATGATGTCAATCTGCATG +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQKSRLP*MMSICM
Trigger: CATGCAGATTGACATCATCCAGGGCAATCGGCTCTT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTTCAGCAGGAAAGAATaGAAACGGCCTCTCACAGCA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQFSRKE*KRPLTA
Trigger: TGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAACAATATCACAGCCTaGTCCATATGCCGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYNNITA*SICREG
Trigger: CCCTTCACGGCATATGGATCAGGCTGTGATATTGTT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAACACTCCACACAGCTaGCTTGGATGTTTCCATGCT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYNTPHS*LGCFHA
Trigger: AGCATGGAAACATCCAAGTCAGCTGTGTGGAGTGTT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAAACAATCTATTATCTTaGGGATCCCATGCTAAGTTG +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSNNLLS*GSHAKL
Trigger: CAACTTAGCATGGGATCCTCAAGATAATAGATTGTT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGGAGGAGCCCACAACTaGATAGAATCAGTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTGGAHN*IESVAV
Trigger: GACAGCAACTGATTCTATTCAGTTGTGGGCTCCTCC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCAAATGTACAGATACTaGGGTTTTGCACTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQQMYRY*GFALPD
Trigger: GTCTGGCAGTGCAAAACCTCAGTATCTGTACATTTG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCGGCACACACCATCATaGCATGAAGTTAACAACACA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQRHTPS*HEVNNT
Trigger: TGTGTTGTTAACTTCATGTCATGATGGTGTGTGCCG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATTGTTGTTTAACCAATaGACTACAAAGCCCCCATTT +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSLLFNQ*TTKPPF
Trigger: AAATGGGGGCTTTGTAGTTCATTGGTTAAACAACAA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAGCATCATCATTTTCATaGTCTACCTGCTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSASSFS*STCLSE
Trigger: TTCTGATAAGCAGGTAGATCATGAAAATGATGATGC...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTACTCCTCCAGTGTATaGCAAAGGTCCTATTGGGTC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYYSSSV*QRSYWV
Trigger: GACCCAATAGGACCTTTGTCATACACTGGAGGAGTA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAAGTTTACTGGCAGTTTaGAGATTGGCAATTGATGAA +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSSLLAV*RLAIDE
Trigger: TTCATCAATTGCCAATCTTCAAACTGCCAGTAAACT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAAGGCGACCTGTGTATaGACAGCTAACAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTKATCV*TANSNW
Trigger: CCAGTTGCTGTTAGCTGTTCATACACAGGTCGCCTT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGGAGCCATCTTCTTTTaGTACCCAGTCCAAATGTAC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQGAIFF*YPVQMY
Trigger: GTACATTTGGACTGGGTATCAAAAGAAGATGGCTCC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACAATAAGCCACCATCTTaGATTACAGTTGGTGAACAA +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENNKPPS*ITVGEQ
Trigger: TTGTTCACCAACTGTAATTCAAGATGGTGGCTTATT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTGGGGGTCCCCTCTCTaGATTGCTGGAATCATATTA +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYWGSPL*IAGIIL
Trigger: TAATATGATTCCAGCAATTCAGAGAGGGGACCCCCA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTTTGCAACTGAATCCTaGGCCATCCTTTTGGCAACC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYFATES*AILLAT
Trigger: GGTTGCCAAAAGGATGGCTCAGGATTCAGTTGCAAA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTCTAAGGCACTGTCGTaGTCTTCACCCCAATCAAGA +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYSKALS*SSPQSR
Trigger: TCTTGATTGGGGTGAAGATCACGACAGTGCCTTAGA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGATGCTGCTAGTGAATaGAGTGTGTGCACCTTCACA +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYDAASE*SVCTFT
Trigger: TGTGAAGGTGCACACACTTCATTCACTAGCAGCATC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACTCACACCAGGCCATTaGGCAGGAGATGAATTTGGT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLTPGH*AGDEFG
Trigger: ACCAAATTCATCTCCTGCTCAATGGCCTGGTGTGAG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAAGAATCCCGGGACTTaGATGGGGTATTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQKNPGT*MGYFQV
Trigger: AACCTGAAAATACCCCATTCAAGTCCCGGGATTCTT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACTTGCATTGCCAGCTTaGCGAAAGCAGACAAGTTGC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLALPA*RKQTSC
Trigger: GCAACTTGTCTGCTTTCGTCAAGCTGGCAATGCAAG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATGTTACCTTCTGCTaGACCTGTGGTAAAATATTC +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSYVTFC*TCGKIF
Trigger: GAATATTTTACCACAGGTTCAGCAGAAGGTAACATA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTATGTTACCTTCTGCTaGACCTGTGGTAAAATATTC +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENYVTFC*TCGKIF
Trigger: GAATATTTTACCACAGGTTCAGCAGAAGGTAACATA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGACTGAGGTTTTGCACTaGCAGACACACTTCCAATCA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQTEVLH*QTHFQS
Trigger: TGATTGGAAGTGTGTCTGGCAGTGCAAAACCTCAGT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGATCACCAGAGGGAAATaGAACAGGAATCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQITRGK*NRNPRR
Trigger: TCTTCTCGGATTCCTGTTGCATTTCCCTCTGGTGAT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACAGAGTGCATCTGACTTaGTATACACAAACAGATTAC +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENRVHLT*YTQTDY
Trigger: GTAATCTGTTTGTGTATAGCAAGTCAGATGCACTCT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAAGAGTGCATCTGACTTaGTATACACAAACAGATTAC +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSRVHLT*YTQTDY
Trigger: GTAATCTGTTTGTGTATAGCAAGTCAGATGCACTCT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAGTGGAGACTGGAGCTaGTTTACTGTAGTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQSGDWS*FTVVSC
Trigger: ACAGGAAACTACAGTAAAGCAGCTCCAGTCTCCACT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAGCTTCAACCTCACTCTaGTTTCTTTTCTTAGTGAAA +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSASTSL*FLFLVK
Trigger: TTTCACTAAGAAAAGAAAGCAGAGTGAGGTTGAAGC...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251076.9
ENST00000543779.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACCCGAGATTAGGAGTTaGTGTTTGGGTGCATACTGC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTPEIRS*CLGAYC
Trigger: GCAGTATGCACCCAAACAGCAACTCCTAATCTCGGG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTGGATGATGTCAATCTaGATGACTCCAGCCCCAATG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYWMMSI*MTPAPM
Trigger: CATTGGGGCTGGAGTCATGCAGATTGACATCATCCA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTCATGCATTGCTGTCTaGTCGGGCATTAATTCAGCA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQSCIAV*SGINSA
Trigger: TGCTGAATTAATGCCCGACCAGACAGCAATGCATGA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACACTTTTATTACACTCTaGGTTGGCTTCCATACAACA +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENTFITL*VGFHTT
Trigger: TGTTGTATGGAAGCCAACCCAGAGTGTAATAAAAGT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCCCTCTCTGAATTGCTaGAATCATATTAATCAGTTC +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENPSLNC*NHINQF
Trigger: GAACTGATTAATATGATTCCAGCAATTCAGAGAGGG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAATCAACTTTTACTATTaGCTGACTCCAGTCATACTG +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSINFYY*LTPVIL
Trigger: CAGTATGACTGGAGTCAGCCAATAGTAAAAGTTGAT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGACTCTCAGGAGATCTTaGTTTTTCTGCAACCACGAC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQTLRRS*FFCNHD
Trigger: GTCGTGGTTGCAGAAAAACCAAGATCTCCTGAGAGT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACAATACTGGGATGAGGTaGTGTTTTCATCTGAACAAT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENNTGMR*CFHLNN
Trigger: ATTGTTCAGATGAAAACACCACCTCATCCCAGTATT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATTTCGCCTTTCCACCTaGATAGCCCAGATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTFRLST*IAQISF
Trigger: GAAGCTGATCTGGGCTATCCAGGTGGAAAGGCGAAA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATATGCAAAGTCACTTGTaGCTTTACTGTGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYMQSHL*LYCGTA
Trigger: GGCAGTGCCACAGTAAAGCCACAAGTGACTTTGCAT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTTAGGAGTTGCTGTTTaGGTGCATACTGCAGTACCG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYLGVAV*VHTAVP
Trigger: CGGTACTGCAGTATGCACCCAAACAGCAACTCCTAA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAAGAGCCGATTGCCCTaGATGATGTCAATCTGCATG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYKSRLP*MMSICM
Trigger: CATGCAGATTGACATCATCCAGGGCAATCGGCTCTT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTTCAGCAGGAAAGAATaGAAACGGCCTCTCACAGCA +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYFSRKE*KRPLTA
Trigger: TGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAACACTCCACACAGCTaGCTTGGATGTTTCCATGCT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTNTPHS*LGCFHA
Trigger: AGCATGGAAACATCCAAGTCAGCTGTGTGGAGTGTT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTGGTACACTAAGTCGTaGGTAAGTTCTAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYWYTKS*VSSRTS
Trigger: GGAAGTCCTAGAACTTACTCACGACTTAGTGTACCA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATACTCCTCCAGTGTATaGCAAAGGTCCTATTGGGTC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTYSSSV*QRSYWV
Trigger: GACCCAATAGGACCTTTGTCATACACTGGAGGAGTA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGCTCAAGAGTGCATCTaGCTTGCTATACACAAACAG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYAQECI*LAIHKQ
Trigger: CTGTTTGTGTATAGCAAGTCAGATGCACTCTTGAGC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGGAGCCATCTTCTTTTaGTACCCAGTCCAAATGTAC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYGAIFF*YPVQMY
Trigger: GTACATTTGGACTGGGTATCAAAAGAAGATGGCTCC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGAGAGAAACAGGCAGTaGAGGAGTACCATCAACAGA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTERNRQ*RSTINR
Trigger: TCTGTTGATGGTACTCCTTCACTGCCTGTTTCTCTC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTGTCTCCAAATTTaGCAGCATGCTTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTQCLQI*QHASTV
Trigger: CACAGTGGAAGCATGCTGTCAAATTTGGAGACACTG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGATTTAAAGGTCGAATaGTCTTGCATTGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQDLKVE*SCIAAS
Trigger: AGAGGCAGCAATGCAAGATCATTCGACCTTTAAATC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGATTTGAAACAGCTCTaGATACTGATCCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQDLKQL*ILILWL
Trigger: CAACCAGAGGATCAGTATTCAGAGCTGTTTCAAATC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATCTAAGGCACTGTCGTaGTCTTCACCCCAATCAAGA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTSKALS*SSPQSR
Trigger: TCTTGATTGGGGTGAAGATCACGACAGTGCCTTAGA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTCTACCATTTCTTCCTaGTCCAGCAGATCACTCTCT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYSTISS*SSRSLS
Trigger: AGAGAGTGATCTGCTGGATCAGGAAGAAATGGTAGA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGAAGGCTACAGTAGCTaGGAAATACTCTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYEGYSS*EILSGD
Trigger: ATCTCCTGAGAGTATTTCTCAGCTACTGTAGCCTTC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGATGCTGCTAGTGAATaGAGTGTGTGCACCTTCACA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTDAASE*SVCTFT
Trigger: TGTGAAGGTGCACACACTTCATTCACTAGCAGCATC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGGTGGACCTTCAAACTaGTCCATTTTCTCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYGGPSN*SIFSCK
Trigger: CTTGCAAGAGAAAATGGATCAGTTTGAAGGTCCACC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGATTCCTTATGGATaGCTTTCGCCTTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTQIPYG*LSPFHL
Trigger: CAGGTGGAAAGGCGAAAGTCATCCATAAGGAATCTG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGATCCATATGTATGACTaGCAGGCCAGTAGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQIHMYD*QASREV
Trigger: TACTTCTCTACTGGCCTGTCAGTCATACATATGGAT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCACAGCTCGGGGATGTaGCAAGTAAACAAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQHSSGM*QVNKRK
Trigger: TTTTCTTTTGTTTACTTGGCACATCCCCGAGCTGTG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGTAGTCTCACAAATCTaGTCACCCAAAAGACAGTCT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQVVSQI*SPKRQS
Trigger: AGACTGTCTTTTGGGTGAGCAGATTTGTGAGACTAC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACATCATCAACATTAAATaGAGTGCCAACCAAGACATT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENIINIK*SANQDI
Trigger: AATGTCTTGGTTGGCACTGCATTTAATGTTGATGAT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATATCACCAGAGGGAAATaGAACAGGAATCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYITRGK*NRNPRR
Trigger: TCTTCTCGGATTCCTGTTGCATTTCCCTCTGGTGAT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTTTACTAAGAGAGCTTaGATCACCAGAGGGAAATGC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQFTKRA*ITRGKC
Trigger: GCATTTCCCTCTGGTGATGCAAGCTCTCTTAGTAAA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAACAAAGCAAGCACTTaGAGAATTGCAGTATGTGCC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQNKAST*RIAVCA
Trigger: GGCACATACTGCAATTCTGCAAGTGCTTGCTTTGTT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAGTTATAAAAACTAAATaGCACCGGGTTACAAGACTT +
Preference number: 4 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSVIKTK*HRVTRL
Trigger: AAGTCTTGTAACCCGGTGGCATTTAGTTTTTATAAC...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTTTCGTCTTTCTGCATaGTCTCGTTTGGCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYFRLSA*SRLACN
Trigger: ATTGCAGGCCAAACGAGAGCATGCAGAAAGACGAAA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAGTGGAGACTGGAGCTaGTTTACTGTAGTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYSGDWS*FTVVSC
Trigger: ACAGGAAACTACAGTAAAGCAGCTCCAGTCTCCACT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACAGGAAGAAATGGCTTTaGAACAAAATAATCCCACAT +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENRKKWL*NKIIPH
Trigger: ATGTGGGATTATTTTGTTGCAAAGCCATTTCTTCCT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTCGTTTGACTGGAAATaGAGAAGAATCCCGGGACTT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYSFDWK*RRIPGL
Trigger: AAGTCCCGGGATTCTTCTGCATTTCCAGTCAAACGA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGCAGTTTGGTTAACTTaGCAGATACTCAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQAVWLT*QILRKP
Trigger: GGGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCAGAATATCATCTCCTaGAGGAGCCCACAACTGAAT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYQNIIS*RSPQLN
Trigger: ATTCAGTTGTGGGCTCCTCCAGGAGATGATATTCTG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTTGAGCCACATTGGTTaGTTATTGCGTCGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQLSHIG*LLRRVQ
Trigger: TTGAACTCGACGCAATAACCAACCAATGTGGCTCAA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGGGAGATCAAGGGGTTaGCTATACACCAGTCTAGAA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTGRSRG*LYTSLE
Trigger: TTCTAGACTGGTGTATAGCCAACCCCTTGATCTCCC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAACAGCTAACAGCAACTaGTCTTCCCACAATGCTCAC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTTANSN*SSHNAH
Trigger: GTGAGCATTGTGGGAAGACCAGTTGCTGTTAGCTGT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCTGCATGCTCTCGTTTaGCCTGCAATCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYLHALV*PAIFFF
Trigger: AAAGAAGAAGATTGCAGGCCAAACGAGAGCATGCAG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAGTGGTAGTGGAGACTaGAGCTGCTTTACTGTAGTT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYSGSGD*SCFTVV
Trigger: AACTACAGTAAAGCAGCTCCAGTCTCCACTACCACT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTTTTTCTTTGTAAGATaGTCTTTCTGCAGGCACCGG +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQFFFVR*SFCRHR
Trigger: CCGGTGCCTGCAGAAAGACCATCTTACAAAGAAAAA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCCAGCTATAGGAATTTaGATCTTGGTGCTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQPAIGI*ILVLLY
Trigger: ATACAGGAGCACCAAGATCCAAATTCCTATAGCTGG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGATATAGTTAGGGGGTaGACCTTCAAACTGATCCAT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQDIVRG*TFKLIH
Trigger: ATGGATCAGTTTGAAGGTCCACCCCCTAACTATATC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCCAAAGTCGTTTGACTaGAAATGCAGAAGAATCCCG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYPKSFD*KCRRIP
Trigger: CGGGATTCTTCTGCATTTCCAGTCAAACGACTTTGG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAATGCAAAGTCACTTGTaGCTTTACTGTGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTMQSHL*LYCGTA
Trigger: GGCAGTGCCACAGTAAAGCCACAAGTGACTTTGCAT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATGGAGTGTCCAGATGTaGCAACTAGACTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTWSVQM*QLDLKR
Trigger: CCTCTTCAAGTCTAGTTGCCACATCTGGACACTCCA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATTAGGAGTTGCTGTTTaGGTGCATACTGCAGTACCG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLGVAV*VHTAVP
Trigger: CGGTACTGCAGTATGCACCCAAACAGCAACTCCTAA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAGAAAGTTTTCCAGGTaGTCTAGCGCTCCTAACAAA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQRKFSR*SSAPNK
Trigger: TTTGTTAGGAGCGCTAGACCACCTGGAAAACTTTCT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGAAAAAGTACTAAACTaGACTAAGAAGGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENEKVLN*TKKVCL
Trigger: CAAACACACCTTCTTAGTCCAGTTTAGTACTTTTTC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAAATGTACAGATACTaGGGTTTTGCACTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTQMYRY*GFALPD
Trigger: GTCTGGCAGTGCAAAACCTCAGTATCTGTACATTTG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTTCTCTATCCTCCTGTaGATGTTCCTCATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYFSILL*MFLIFS
Trigger: AGAGAAGATGAGGAACATTCACAGGAGGATAGAGAA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATGGTACACTAAGTCGTaGGTAAGTTCTAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTWYTKS*VSSRTS
Trigger: GGAAGTCCTAGAACTTACTCACGACTTAGTGTACCA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAAAGTGACTGCCCACTaGTTTAAAGAACCATCTATG +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQKVTAH*FKEPSM
Trigger: CATAGATGGTTCTTTAAATCAGTGGGCAGTCACTTT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAGTGGTAAAACTGAATaGCATGCCAGGTCATTGAGG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTSGKTE*HARSLR
Trigger: CCTCAATGACCTGGCATGTCATTCAGTTTTACCACT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATTGTCTGAGTCCCACTaGCAATCTAATTCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLSESH*QSNSGV
Trigger: GACTCCTGAATTAGATTGTCAGTGGGACTCAGACAA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATATTGCATTTGGGTCATaGAATGTACGAGTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYIAFGS*NVRVAA
Trigger: TGCAGCAACTCGTACATTTCATGACCCAAATGCAAT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAAGCAACTGTGTATTTaGGCCACATTGGTTGGTTAT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQKQLCI*ATLVGY
Trigger: ATAACCAACCAATGTGGCTCAAATACACAGTTGCTT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTGTACAGATTTAAGATaGAGGTGCCACATATGCAGA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQCTDLR*RCHICR
Trigger: TCTGCATATGTGGCACCTTCATCTTAAATCTGTACA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTCTTATTACTTCAACTaGTTCTGGGAGATCAAGGGG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYSYYFN*FWEIKG
Trigger: CCCCTTGATCTCCCAGAATCAGTTGAAGTAATAAGA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGCTCAAGAGTGCATCTaGCTTGCTATACACAAACAG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTAQECI*LAIHKQ
Trigger: CTGTTTGTGTATAGCAAGTCAGATGCACTCTTGAGC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCTCAGTCACAATTCCTaGAAGCCTTCCATACATGAA +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYLSHNS*KPSIHE
Trigger: TTCATGTATGGAAGGCTTTCAGGAATTGTGACTGAG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAGTTCTTCTCAGTTTTaGGACCTAAGGTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYSSSQF*DLRLPK
Trigger: CTTTGGCAACCTTAGGTCTCAAAACTGAGAAGAACT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGACTTTTACTATTGGCTaGCTCCAGTCATACTGTGAT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQTFTIG*LQSYCD
Trigger: ATCACAGTATGACTGGAGTCAGCCAATAGTAAAAGT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGGGTCTGAGGCCTTCTaGTCTGATTGTTTATCTTTT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYGSEAF*SDCLSF
Trigger: AAAAGATAAACAATCAGATCAGAAGGCCTCAGACCC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGGATCATCCTCTTCCTaGGGTGTTAATAACATGTTA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQGSSSS*GVNNML
Trigger: TAACATGTTATTAACACCTCAGGAAGAGGATGATCC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGAAGGCTACAGTAGCTaGGAAATACTCTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTEGYSS*EILSGD
Trigger: ATCTCCTGAGAGTATTTCTCAGCTACTGTAGCCTTC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCAAAAGATTAATAAGTaGGCTCACACCAGGCCATTG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYQKINK*AHTRPL
Trigger: CAATGGCCTGGTGTGAGCTCACTTATTAATCTTTTG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAAGAATCCCGGGACTTaGATGGGGTATTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTKNPGT*MGYFQV
Trigger: AACCTGAAAATACCCCATTCAAGTCCCGGGATTCTT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAATGCCAAAGTCGTTTaGCTGGAAATGCAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQNAKVV*LEMQKN
Trigger: ATTCTTCTGCATTTCCAGTCAAACGACTTTGGCATT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTCACTTTTAAATGAATaGATTAGGCCATGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQSLLNE*IRPWPV
Trigger: GACAGGCCATGGCCTAATTCATTCATTTAAAAGTGA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCACAGCTCGGGGATGTaGCAAGTAAACAAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYHSSGM*QVNKRK
Trigger: TTTTCTTTTGTTTACTTGGCACATCCCCGAGCTGTG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGTAGTCTCACAAATCTaGTCACCCAAAAGACAGTCT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYVVSQI*SPKRQS
Trigger: AGACTGTCTTTTGGGTGAGCAGATTTGTGAGACTAC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAATCACCAGAGGGAAATaGAACAGGAATCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTITRGK*NRNPRR
Trigger: TCTTCTCGGATTCCTGTTGCATTTCCCTCTGGTGAT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTTTACTAAGAGAGCTTaGATCACCAGAGGGAAATGC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYFTKRA*ITRGKC
Trigger: GCATTTCCCTCTGGTGATGCAAGCTCTCTTAGTAAA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTCCTTACTGTTGGTTTaGTCAGTCACAATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQSLLLV*SVTIPE
Trigger: TTCAGGAATTGTGACTGAGCAAACCAACAGTAAGGA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCTTGACTTAACTCCTTaGTTGATACTACCACCTAGT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQLDLTP*LILPPS
Trigger: ACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTCAAG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGATGATCTTGCATTGCTaGCTCTTCTGCATTAGAACT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQMILHC*LFCIRT
Trigger: AGTTCTAATGCAGAAGAGGCAGCAATGCAAGATCAT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATGCCAGAACTTCCATTaGCATCACTCAGAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTCQNFH*HHSELL
Trigger: CAAAAGCTCTGAGTGATGGCAATGGAAGTTCTGGCA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATTTCGTCTTTCTGCATaGTCTCGTTTGGCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTFRLSA*SRLACN
Trigger: ATTGCAGGCCAAACGAGAGCATGCAGAAAGACGAAA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATCGTTTGACTGGAAATaGAGAAGAATCCCGGGACTT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTSFDWK*RRIPGL
Trigger: AAGTCCCGGGATTCTTCTGCATTTCCAGTCAAACGA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGCAGTTTGGTTAACTTaGCAGATACTCAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYAVWLT*QILRKP
Trigger: GGGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCTTAGAAAGCAGAATTaGCTAGTGATGACTGTAGTG +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQLRKQN*LVMTVV
Trigger: CACTACAGTCATCACTAGGCAATTCTGCTTTCTAAG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAATATCATCTCCTaGAGGAGCCCACAACTGAAT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTQNIIS*RSPQLN
Trigger: ATTCAGTTGTGGGCTCCTCCAGGAGATGATATTCTG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGCCAACCAAGACATTTaGAATATCTGTGGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTANQDI*NICGRV
Trigger: AACCCTGCCACAGATATTCCAAATGTCTTGGTTGGC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCGAGCAGTAGACTGTTaGCTCACAATATTAAACACT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQRAVDC*LTILNT
Trigger: AGTGTTTAATATTGTGAGCCAACAGTCTACTGCTCG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTTGAGCCACATTGGTTaGTTATTGCGTCGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYLSHIG*LLRRVQ
Trigger: TTGAACTCGACGCAATAACCAACCAATGTGGCTCAA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGTATTTGAGCCACATTaGTTGGTTATTGCGTCGAGT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYVFEPH*LVIASS
Trigger: ACTCGACGCAATAACCAACCAATGTGGCTCAAATAC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTATTACACTCTGGGTTaGCTTCCATACAACATTTCC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQYYTLG*LPYNIS
Trigger: GGAAATGTTGTATGGAAGCCAACCCAGAGTGTAATA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCAAGACATACCTCTATaGCATCTTTCAATGAACCAG +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQQDIPL*HLSMNQ
Trigger: CTGGTTCATTGAAAGATGCCATAGAGGTATGTCTTG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAACTCTCAGGAGATCTTaGTTTTTCTGCAACCACGAC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTTLRRS*FFCNHD
Trigger: GTCGTGGTTGCAGAAAAACCAAGATCTCCTGAGAGT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAGTGGTAGTGGAGACTaGAGCTGCTTTACTGTAGTT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTSGSGD*SCFTVV
Trigger: AACTACAGTAAAGCAGCTCCAGTCTCCACTACCACT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTCACATCTTCAATACTaGGATGAGGTGGTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQSHLQY*DEVVFS
Trigger: TGAAAACACCACCTCATCCCAGTATTGAAGATGTGA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCACTGGAGGAATTTGTaGCAAGAGCATGTATCAATA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQHWRNL*QEHVSI
Trigger: TATTGATACATGCTCTTGCCACAAATTCCTCCAGTG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTTTTTCTTTGTAAGATaGTCTTTCTGCAGGCACCGG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYFFFVR*SFCRHR
Trigger: CCGGTGCCTGCAGAAAGACCATCTTACAAAGAAAAA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGGATTTGATGCAGTTTaGTTAACTTGCCAGATACTC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQGFDAV*LTCQIL
Trigger: GAGTATCTGGCAAGTTAACCAAACTGCATCAAATCC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGCTTCAACCTTGATGTaGCAATCTTCTGCTATGCAG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTASTLM*QSSAMQ
Trigger: CTGCATAGCAGAAGATTGCCACATCAAGGTTGAAGC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAACAGCATTACCATATaGAGCTGCAATTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYNSITI*SCNSSL
Trigger: CAAGGAAGAATTGCAGCTTCATATGGTAATGCTGTT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATATCCTGAGGTATAATTaGAGACTTCCAACCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYILRYN*RLPTSH
Trigger: ATGACTGGTTGGAAGTCTTCAATTATACCTCAGGAT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATGGGAAATGTGTCTTTaGACTTCATGCATTGCTGTC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTWEMCL*TSCIAV
Trigger: GACAGCAATGCATGAAGTTCAAAGACACATTTCCCA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTTGTTGTTTAACCAATaGACTACAAAGCCCCCATTT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQLLFNQ*TTKPPF
Trigger: AAATGGGGGCTTTGTAGTTCATTGGTTAAACAACAA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATTCTCTATCCTCCTGTaGATGTTCCTCATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTFSILL*MFLIFS
Trigger: AGAGAAGATGAGGAACATTCACAGGAGGATAGAGAA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATGTAACAGCGTGTGGTaGGAATCTTTTGTCGCATTT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTCNSVW*ESFVAF
Trigger: AAATGCGACAAAAGATTCTCACCACACGCTGTTACA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAATTGCATTTGGGTCATaGAATGTACGAGTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTIAFGS*NVRVAA
Trigger: TGCAGCAACTCGTACATTTCATGACCCAAATGCAAT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAAGCAACTGTGTATTTaGGCCACATTGGTTGGTTAT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYKQLCI*ATLVGY
Trigger: ATAACCAACCAATGTGGCTCAAATACACAGTTGCTT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATCTTATTACTTCAACTaGTTCTGGGAGATCAAGGGG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTSYYFN*FWEIKG
Trigger: CCCCTTGATCTCCCAGAATCAGTTGAAGTAATAAGA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACTCAGTCACAATTCCTaGAAGCCTTCCATACATGAA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLSHNS*KPSIHE
Trigger: TTCATGTATGGAAGGCTTTCAGGAATTGTGACTGAG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGATTTAAAGGTCGAATaGTCTTGCATTGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTDLKVE*SCIAAS
Trigger: AGAGGCAGCAATGCAAGATCATTCGACCTTTAAATC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGATTTGAAACAGCTCTaGATACTGATCCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTDLKQL*ILILWL
Trigger: CAACCAGAGGATCAGTATTCAGAGCTGTTTCAAATC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACTTGAGTGCATAAGATaGCTTGAAAGTACCCTTGCA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLECIR*LESTLA
Trigger: TGCAAGGGTACTTTCAAGTCATCTTATGCACTCAAG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGTAATCTTTTGCAACTaGATCCTGAGCCATCCTTTT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYVIFCN*ILSHPF
Trigger: AAAAGGATGGCTCAGGATTCAGTTGCAAAAGATTAC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAGTTCTTCTCAGTTTTaGGACCTAAGGTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTSSSQF*DLRLPK
Trigger: CTTTGGCAACCTTAGGTCTCAAAACTGAGAAGAACT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCATCCAACTTTAAAATaGGCATTTGCAGTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQHPTLK*AFAVVK
Trigger: CTTTACCACTGCAAATGCTCATTTTAAAGTTGGATG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATACTTTTACTATTGGCTaGCTCCAGTCATACTGTGAT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYTFTIG*LQSYCD
Trigger: ATCACAGTATGACTGGAGTCAGCCAATAGTAAAAGT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAAAAGATTAATAAGTaGGCTCACACCAGGCCATTG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTQKINK*AHTRPL
Trigger: CAATGGCCTGGTGTGAGCTCACTTATTAATCTTTTG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGTCTTCATCTTGGGCTaGACTCAAAAGATTAATAAG +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQVFILG*TQKINK
Trigger: CTTATTAATCTTTTGAGTTCAGCCCAAGATGAAGAC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTTGATGGACTGGGTGTaGAGTCATTCTCTTAACATT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYLMDWV*SHSLNI
Trigger: AATGTTAAGAGAATGACTTCACACCCAGTCCATCAA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAACTTGGATGTTTCCATaGTTAGCACCAGGAATGATC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTTWMFP*LAPGMI
Trigger: GATCATTCCTGGTGCTAAGCATGGAAACATCCAAGT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAATGACAGAGTGCATTTaGATGGTGGGAAATGTGTCT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTMTECI*MVGNVS
Trigger: AGACACATTTCCCACCATGCAAATGCACTCTGTCAT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATTTACTAAGAGAGCTTaGATCACCAGAGGGAAATGC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTFTKRA*ITRGKC
Trigger: GCATTTCCCTCTGGTGATGCAAGCTCTCTTAGTAAA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAACAAAGCAAGCACTTaGAGAATTGCAGTATGTGCC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTNKAST*RIAVCA
Trigger: GGCACATACTGCAATTCTGCAAGTGCTTGCTTTGTT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACTGGTCTTCCCACAATaGTCACTGTACTGCTATTAT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLVFPQ*SLYCYY
Trigger: ATAATAGCAGTACAGTGAGCATTGTGGGAAGACCAG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTCCTTACTGTTGGTTTaGTCAGTCACAATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYSLLLV*SVTIPE
Trigger: TTCAGGAATTGTGACTGAGCAAACCAACAGTAAGGA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACATTGCTGCCTCTTCTaGATTAGAACTATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTHCCLF*IRTISF
Trigger: GAAGCTGATAGTTCTAATGCAGAAGAGGCAGCAATG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAGCAACTCTTATCTCTaGTTTCATCAAGCTCAGTAC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYSNSYL*FHQAQY
Trigger: GTACTGAGCTTGATGAAAGCAGAGATAAGAGTTGCT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGTCCCCTCTCTGAATTaGTGGAATCATATTAATCAG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYVPSLN*WNHINQ
Trigger: CTGATTAATATGATTCCAGCAATTCAGAGAGGGGAC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCATTTGACCATTCAATaGCAGAACTTCCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYHLTIQ*QNFHCH
Trigger: ATGGCAATGGAAGTTCTGGCATTGAATGGTCAAATG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTGCTCTCGTTTGGCCTaGAATCTTCTTCTTTCTATT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYCSRLA*NLLLSI
Trigger: AATAGAAAGAAGAAGATTGCAGGCCAAACGAGAGCA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAGATCTTGGTTTTTCTaGAACCACGACTTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYRSWFF*NHDFRL
Trigger: AAGACGAAAGTCGTGGTTGCAGAAAAACCAAGATCT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGAATTTGGATCTTGGTaGTCCTGTATTTGTGTATCT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQEFGSW*SCICVS
Trigger: AGATACACAAATACAGGAGCACCAAGATCCAAATTC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTGTTTAACAAGGAAATaGCAAAGTCGTTTGACTGGA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQCLTRK*QSRLTG
Trigger: TCCAGTCAAACGACTTTGGCATTTCCTTGTTAAACA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCTTAGAAAGCAGAATTaGCTAGTGATGACTGTAGTG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYLRKQN*LVMTVV
Trigger: CACTACAGTCATCACTAGGCAATTCTGCTTTCTAAG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCAGTTTTGGTTGACCTaGTCCACATGTTCTTCTATA +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYQFWLT*STCSSI
Trigger: TATAGAAGAACATGTGGAGCAGGTCAACCAAAACTG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGCAATTCTTCCTTGTTaGTTAGAACACTCCACACAG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTAILPC*LEHSTQ
Trigger: CTGTGTGGAGTGTTCTAACCAACAAGGAAGAATTGC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATTCATATGTGTACTGTaGGATCTAGAGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTFICVL*DLECGC
Trigger: ACAGCCACACTCTAGATCCCACAGTACACATATGAA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATTGAGCCACATTGGTTaGTTATTGCGTCGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLSHIG*LLRRVQ
Trigger: TTGAACTCGACGCAATAACCAACCAATGTGGCTCAA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGTATTTGAGCCACATTaGTTGGTTATTGCGTCGAGT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTVFEPH*LVIASS
Trigger: ACTCGACGCAATAACCAACCAATGTGGCTCAAATAC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTATTACACTCTGGGTTaGCTTCCATACAACATTTCC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYYYTLG*LPYNIS
Trigger: GGAAATGTTGTATGGAAGCCAACCCAGAGTGTAATA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACTCCATCCTTACTGTTaGTTTGCTCAGTCACAATTC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLHPYC*FAQSQF
Trigger: GAATTGTGACTGAGCAAACCAACAGTAAGGATGGAG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGATCAACTTTTACTATTaGCTGACTCCAGTCATACTG +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQINFYY*LTPVIL
Trigger: CAGTATGACTGGAGTCAGCCAATAGTAAAAGTTGAT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGGCTGGTCTTCATCTTaGGCTGAACTCAAAAGATTA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTGWSSS*AELKRL
Trigger: TAATCTTTTGAGTTCAGCCCAAGATGAAGACCAGCC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAATGTTCAGTTTTGGCTaGTCTTCATCTTGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTMFSFG*SSSWAE
Trigger: TTCAGCCCAAGATGAAGACCAGCCAAAACTGAACAT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAAAATGTTCAGTTTTaGCTGGTCTTCATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTQNVQF*LVFILG
Trigger: GCCCAAGATGAAGACCAGCCAAAACTGAACATTTTG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCGATTATTTAATGGGTaGGCTGCAAGCCGAAATAAT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYRLFNG*AASRNN
Trigger: ATTATTTCGGCTTGCAGCCCACCCATTAAATAATCG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACCAGCTATAGGAATTTaGATCTTGGTGCTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTPAIGI*ILVLLY
Trigger: ATACAGGAGCACCAAGATCCAAATTCCTATAGCTGG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGATATCAGATTCCTTATaGATGACTTTCGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQISDSL*MTFAFP
Trigger: TGGAAAGGCGAAAGTCATCCATAAGGAATCTGATAT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGGATTTGATGCAGTTTaGTTAACTTGCCAGATACTC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYGFDAV*LTCQIL
Trigger: GAGTATCTGGCAAGTTAACCAAACTGCATCAAATCC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAGAAAGTTTTCCAGGTaGTCTAGCGCTCCTAACAAA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTRKFSR*SSAPNK
Trigger: TTTGTTAGGAGCGCTAGACCACCTGGAAAACTTTCT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAACAGCATTACCATATaGAGCTGCAATTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTNSITI*SCNSSL
Trigger: CAAGGAAGAATTGCAGCTTCATATGGTAATGCTGTT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAACAATCTATTATCTTaGGGATCCCATGCTAAGTTG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYNNLLS*GSHAKL
Trigger: CAACTTAGCATGGGATCCTCAAGATAATAGATTGTT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGGCATTAATTCAGCATaGGTTACAAGAACAGATGAC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTGINSA*VTRTDD
Trigger: GTCATCTGTTCTTGTAACTCATGCTGAATTAATGCC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATGTACAGATTTAAGATaGAGGTGCCACATATGCAGA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTCTDLR*RCHICR
Trigger: TCTGCATATGTGGCACCTTCATCTTAAATCTGTACA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCATCCAACTTTAAAATaGGCATTTGCAGTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYHPTLK*AFAVVK
Trigger: CTTTACCACTGCAAATGCTCATTTTAAAGTTGGATG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAACTTTTACTATTGGCTaGCTCCAGTCATACTGTGAT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTTFTIG*LQSYCD
Trigger: ATCACAGTATGACTGGAGTCAGCCAATAGTAAAAGT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGGATCATCCTCTTCCTaGGGTGTTAATAACATGTTA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTGSSSS*GVNNML
Trigger: TAACATGTTATTAACACCTCAGGAAGAGGATGATCC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCTTGTAGCAAAAATTTaGGTTCCATCCTTACTGAAG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYLVAKI*VPSLLK
Trigger: CTTCAGTAAGGATGGAACTCAAATTTTTGCTACAAG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAATGCCAAAGTCGTTTaGCTGGAAATGCAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTNAKVV*LEMQKN
Trigger: ATTCTTCTGCATTTCCAGTCAAACGACTTTGGCATT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTATGTTACCTTCTGCTaGACCTGTGGTAAAATATTC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYYVTFC*TCGKIF
Trigger: GAATATTTTACCACAGGTTCAGCAGAAGGTAACATA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATCACTTTTAAATGAATaGATTAGGCCATGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTSLLNE*IRPWPV
Trigger: GACAGGCCATGGCCTAATTCATTCATTTAAAAGTGA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCTCATCTTCTCTATCTaGATCATCATTTTCATGATC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQLIFSI*IIIFMI
Trigger: GATCATGAAAATGATGATGCAGATAGAGAAGATGAG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAAATGTACGAGTTGCTaGATTTCTAAGAGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQKCTSC*ISKRLF
Trigger: AAACAACCTCTTAGAAATGCAGCAACTCGTACATTT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATATGAAATGTACGAGTTaGTGCATTTCTAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYMKCTS*CISKRL
Trigger: CAACCTCTTAGAAATGCAGCAACTCGTACATTTCAT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACTTGACTTAACTCCTTaGTTGATACTACCACCTAGT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLDLTP*LILPPS
Trigger: ACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTCAAG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCACTGTGCATATACATaGATTTCACAATCCATTCCT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYHCAYT*ISQSIP
Trigger: AGGAATGGATTGTGAAATGCATGTATATGCACAGTG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACCAAATTTGACAGCATaGTTCCACTGTGCATATACA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTPNLTA*FHCAYT
Trigger: TGTATATGCACAGTGGAAGCATGCTGTCAAATTTGG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAGGATCTCTAACTATTaGTACTTCACCTGCAATACA +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYRISNY*YFTCNT
Trigger: TGTATTGCAGGTGAAGTAGCAATAGTTAGAGATCCT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGTTATAAAAACTAAATaGCACCGGGTTACAAGACTT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQVIKTK*HRVTRL
Trigger: AAGTCTTGTAACCCGGTGGCATTTAGTTTTTATAAC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATGCTCTCGTTTGGCCTaGAATCTTCTTCTTTCTATT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTCSRLA*NLLLSI
Trigger: AATAGAAAGAAGAAGATTGCAGGCCAAACGAGAGCA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATTGCGTGTTCTTCAATaGTTTCTGTCCTTAGTCTTC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLRVLQ*FLSLVF
Trigger: GAAGACTAAGGACAGAAAGCATTGAAGAACACGCAA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAGGAAGAAATGGCTTTaGAACAAAATAATCCCACAT +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQRKKWL*NKIIPH
Trigger: ATGTGGGATTATTTTGTTGCAAAGCCATTTCTTCCT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGCTTCAACCTCACTCTaGTTTCTTTTCTTAGTGAAA +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYASTSL*FLFLVK
Trigger: TTTCACTAAGAAAAGAAAGCAGAGTGAGGTTGAAGC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAACTAGGAGAGGTTTCTaGAGAAGAATCTACGTTCTT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTTRRGF*RRIYVL
Trigger: AAGAACGTAGATTCTTCTCCAGAAACCTCTCCTAGT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCCCTCTCTGAATTGCTaGAATCATATTAATCAGTTC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYPSLNC*NHINQF
Trigger: GAACTGATTAATATGATTCCAGCAATTCAGAGAGGG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTTTGAAAAGAAGCTTTaGCAACCTTTTCAATGCATC +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQFEKKL*QPFQCI
Trigger: GATGCATTGAAAAGGTTGCCAAAGCTTCTTTTCAAA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGTTTATCTTTTTCCCTaGCATCTGTACTTTTCATCA +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQVYLFP*HLYFSS
Trigger: TGATGAAAAGTACAGATGCCAGGGAAAAAGATAAAC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATCACATCTTCAATACTaGGATGAGGTGGTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTSHLQY*DEVVFS
Trigger: TGAAAACACCACCTCATCCCAGTATTGAAGATGTGA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGGATTTGATGCAGTTTaGTTAACTTGCCAGATACTC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTGFDAV*LTCQIL
Trigger: GAGTATCTGGCAAGTTAACCAAACTGCATCAAATCC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGAAAAAGTACTAAACTaGACTAAGAAGGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQEKVLN*TKKVCL
Trigger: CAAACACACCTTCTTAGTCCAGTTTAGTACTTTTTC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAACAATCTATTATCTTaGGGATCCCATGCTAAGTTG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTNNLLS*GSHAKL
Trigger: CAACTTAGCATGGGATCCTCAAGATAATAGATTGTT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGCATCATCATTTTCATaGTCTACCTGCTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTASSFS*STCLSE
Trigger: TTCTGATAAGCAGGTAGATCATGAAAATGATGATGC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAGTTTACTGGCAGTTTaGAGATTGGCAATTGATGAA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTSLLAV*RLAIDE
Trigger: TTCATCAATTGCCAATCTTCAAACTGCCAGTAAACT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAATAAGCCACCATCTTaGATTACAGTTGGTGAACAA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTNKPPS*ITVGEQ
Trigger: TTGTTCACCAACTGTAATTCAAGATGGTGGCTTATT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR TCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACTTGTAGCAAAAATTTaGGTTCCATCCTTACTGAAG +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLVAKI*VPSLLK
Trigger: CTTCAGTAAGGATGGAACTCAAATTTTTGCTACAAG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATATCATCAACATTAAATaGAGTGCCAACCAAGACATT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYIINIK*SANQDI
Trigger: AATGTCTTGGTTGGCACTGCATTTAATGTTGATGAT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAACATTGGTTGGTTATTaGGTCGAGTTCAATAATGCA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTTLVGY*VEFNNA
Trigger: TGCATTATTGAACTCGACGCAATAACCAACCAATGT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAGGATCTCTAACTATTaGTACTTCACCTGCAATACA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTRISNY*YFTCNT
Trigger: TGTATTGCAGGTGAAGTAGCAATAGTTAGAGATCCT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAGGAAGAAATGGCTTTaGAACAAAATAATCCCACAT +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYRKKWL*NKIIPH
Trigger: ATGTGGGATTATTTTGTTGCAAAGCCATTTCTTCCT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGAATTTGGATCTTGGTaGTCCTGTATTTGTGTATCT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTEFGSW*SCICVS
Trigger: AGATACACAAATACAGGAGCACCAAGATCCAAATTC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATGTTTAACAAGGAAATaGCAAAGTCGTTTGACTGGA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTCLTRK*QSRLTG
Trigger: TCCAGTCAAACGACTTTGGCATTTCCTTGTTAAACA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAACTTTTATTACACTCTaGGTTGGCTTCCATACAACA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTTFITL*VGFHTT
Trigger: TGTTGTATGGAAGCCAACCCAGAGTGTAATAAAAGT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTTTGAAAAGAAGCTTTaGCAACCTTTTCAATGCATC +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYFEKKL*QPFQCI
Trigger: GATGCATTGAAAAGGTTGCCAAAGCTTCTTTTCAAA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATTACTTTTGGAATTTTaGAGAGTACCTCCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLLLEF*RVPPRL
Trigger: TAGCCTTGGAGGTACTCTCCAAAATTCCAAAAGTAA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGTTTATCTTTTTCCCTaGCATCTGTACTTTTCATCA +
Preference number: 4 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYVYLFP*HLYFSS
Trigger: TGATGAAAAGTACAGATGCCAGGGAAAAAGATAAAC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAATACTGGGATGAGGTaGTGTTTTCATCTGAACAAT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTNTGMR*CFHLNN
Trigger: ATTGTTCAGATGAAAACACCACCTCATCCCAGTATT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAATATCAGATTCCTTATaGATGACTTTCGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTISDSL*MTFAFP
Trigger: TGGAAAGGCGAAAGTCATCCATAAGGAATCTGATAT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAATCATCAACATTAAATaGAGTGCCAACCAAGACATT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTIINIK*SANQDI
Trigger: AATGTCTTGGTTGGCACTGCATTTAATGTTGATGAT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACTCATCTTCTCTATCTaGATCATCATTTTCATGATC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLIFSI*IIIFMI
Trigger: GATCATGAAAATGATGATGCAGATAGAGAAGATGAG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAAATGTACGAGTTGCTaGATTTCTAAGAGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTKCTSC*ISKRLF
Trigger: AAACAACCTCTTAGAAATGCAGCAACTCGTACATTT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR GCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGTTATAAAAACTAAATaGCACCGGGTTACAAGACTT +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTVIKTK*HRVTRL
Trigger: AAGTCTTGTAACCCGGTGGCATTTAGTTTTTATAAC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CCA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATTTGAAAAGAAGCTTTaGCAACCTTTTCAATGCATC +
Preference number: 4 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTFEKKL*QPFQCI
Trigger: GATGCATTGAAAAGGTTGCCAAAGCTTCTTTTCAAA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS TCA 90 bp CCCGGGCTGGACAGAATGCGCGGGAGGTGCGACAAGCTCCGCGCCTaGCCCTCCTCGGGCTGCGAGAGCCGTTTCCCTCTGTGCCTCCCT +
Preference number: 5 (lower is better)
Translates to: PGLDRMRGRCDKLRA*PSSGCESRFPLCLP
Trigger: AGGGAGGCACAGAGGGAAACGGCTCTCGCAGCCCGAGGAGGGTCAGGCGCGGAGCTTGTCGCACCTCCCGCGCATTCTGTCCAGCCCGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000558507.1
ENST00000560891.6
CDS GCA 90 bp CGCCCGGGTCGCCGCTCAGCTGCGGAAATGCCCGGATGTTCCCACTaGCTGCTGCACCGGCGCACAAATGCGGGAGGGCAAGGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: RPGRRSAAEMPGCSH*LLHRRTNAGGQGCL
Trigger: CAAGCACCCTTGCCCTCCCGCATTTGTGCGCCGGTGCAGCAGGCAGTGGGAACATCCGGGCATTTCCGCAGCTGAGCGGCGACCCGGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251076.9
CDS GCA 90 bp GAGGACCTGATGCAGATGCATCTCCGGAGCCCGGGCTGGACAGAATaGGCGGGAGGTGCGACAAGCTCCGCGCCTGACCCTCCTCGGGCT +
Preference number: 5 (lower is better)
Translates to: EDLMQMHLRSPGWTE*AGGATSSAPDPPRA
Trigger: AGCCCGAGGAGGGTCAGGCGCGGAGCTTGTCGCACCTCCCGCGCATTCTGTCCAGCCCGGGCTCCGGAGATGCATCTGCATCAGGTCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000558507.1
ENST00000560891.6
CDS CCA 90 bp AGCTCCGGTGAGGACCTGATGCAGATGCATCTCCGGAGCCCGGGCTaGACAGAATGCGCGGGAGGTGCGACAAGCTCCGCGCCTGACCCT +
Preference number: 5 (lower is better)
Translates to: SSGEDLMQMHLRSPG*TECAGGATSSAPDP
Trigger: AGGGTCAGGCGCGGAGCTTGTCGCACCTCCCGCGCATTCTGTCCAGCCCGGGCTCCGGAGATGCATCTGCATCAGGTCCTCACCGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000558507.1
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGAGCCAAACCACCACCTaGGGCCCCATGAAGGCTACA +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKSQTTT*GPMKAT
Trigger: TGTAGCCTTCATGGGGCCCAAGGTGGTGGTTTGGCT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTACGAAAGCAGACAAGTaGCTGAGGCCGCGTCCATTC +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTATKADK*LRPRPF
Trigger: GAATGGACGCGGCCTCAGCAACTTGTCTGCTTTCGT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTGGGAGATCAAGGGGTaGGCTATACACCAGTCTAGA +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTAWEIKG*AIHQSR
Trigger: TCTAGACTGGTGTATAGCCAACCCCTTGATCTCCCA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCCCTGGGCATATACTaGCTAGTTTTGCGCCACGAA +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAPLGIY*LVLRHE
Trigger: TTCGTGGCGCAAAACTAGCAAGTATATGCCCAGGGG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTGCCAACCAAGACATTaGGAATATCTGTGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKCQPRH*EYLWQG
Trigger: ACCCTGCCACAGATATTCCAAATGTCTTGGTTGGCA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGAAAGGTCGAATGATCTaGCATTGCTGCCTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKKGRMI*HCCLFC
Trigger: GCAGAAGAGGCAGCAATGCAAGATCATTCGACCTTT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTTGTTGACGCAATACTaGCTGAAAGCAGAGGTAGGG +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKLLTQY*LKAEVG
Trigger: CCCTACCTCTGCTTTCAGCAAGTATTGCGTCAACAA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTTGTTGACGCAATACTaGCTGAAAGCAGAGGTAGGG +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTALLTQY*LKAEVG
Trigger: CCCTACCTCTGCTTTCAGCAAGTATTGCGTCAACAA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGAAGAATCCCGGGACTaGAATGGGGTATTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTAEESRD*NGVFSG
Trigger: ACCTGAAAATACCCCATTCAAGTCCCGGGATTCTTC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGATTAGGAGTTGCTGTTaGGGTGCATACTGCAGTACC +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKIRSCC*GAYCST
Trigger: GGTACTGCAGTATGCACCCAAACAGCAACTCCTAAT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCAGGAGAAGAGCCGATaGCCCTGGATGATGTCAATC +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAQEKSR*PWMMSI
Trigger: GATTGACATCATCCAGGGCAATCGGCTCTTCTCCTG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAGCTGCAATTCTTCCTaGTTGGTTAGAACACTCCAC +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTASCNSS*LVRTLH
Trigger: GTGGAGTGTTCTAACCAACAAGGAAGAATTGCAGCT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGCAACAAAGCAAGCACTaGCAGAATTGCAGTATGTGC +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKQQSKH*QNCSMC
Trigger: GCACATACTGCAATTCTGCAAGTGCTTGCTTTGTTG...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTTTGAGCCACATTGGTaGGTTATTGCGTCGAGTTCA +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTAFEPHW*VIASSS
Trigger: TGAACTCGACGCAATAACCAACCAATGTGGCTCAAA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTGGCCTGCTGAAGGCGTaGCTCTTATTACTTCAACTG +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAGLLKA*LLLLQL
Trigger: CAGTTGAAGTAATAAGAGCAACGCCTTCAGCAGGCC...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGGGAGCCATCTTCTTTaGATACCCAGTCCAAATGTA +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTAGSHLL*IPSPNV
Trigger: TACATTTGGACTGGGTATCAAAAGAAGATGGCTCCC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGACTTAACTCCTTGCTaGATACTACCACCTAGTGGT +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKDLTPC*ILPPSG
Trigger: ACCACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTCAGTGTCTCCAAATTaGACAGCATGCTTCCACTGT +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKSVSPN*TACFHC
Trigger: ACAGTGGAAGCATGCTGTCAAATTTGGAGACACTGA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGACTTGAAAGTACCCTaGCATGTTCTTGGCCAAAGT +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTADLKVP*HVLGQS
Trigger: ACTTTGGCCAAGAACATGCAAGGGTACTTTCAAGTC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTACTCTCAGGAGATCTaGGTTTTTCTGCAACCACGA +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKYSQEI*VFLQPR
Trigger: TCGTGGTTGCAGAAAAACCAAGATCTCCTGAGAGTA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGGATGTTGCACTGGGTaGATAAAGAGTTGTAGTGGA +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKGCCTG*IKSCSG
Trigger: TCCACTACAACTCTTTATCAACCCAGTGCAACATCC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS TCA 90 bp TCCAAGGCCAGAGCCTTAATAGCTGAGTCATGGGCCTGGAACGTGTaGATGAGCTGCCTTTGCCTGATGTCAAAAATGCAGACGTGTCCT +
Preference number: 5 (lower is better)
Translates to: SKARALIAESWAWNV*MSCLCLMSKMQTCP
Trigger: AGGACACGTCTGCATTTTTGACATCAGGCAAAGGCAGCTCATTCACACGTTCCAGGCCCATGACTCAGCTATTAAGGCTCTGGCCTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000559769.1
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCAGTTGTCTCCAGGGTaGACAGCTCCGGTGAGGACC +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENQLSPG*TAPVRT
Trigger: GGTCCTCACCGGAGCTGTCAACCCTGGAGACAACTG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACAGTTGTCTCCAGGGTaGACAGCTCCGGTGAGGACC +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSQLSPG*TAPVRT
Trigger: GGTCCTCACCGGAGCTGTCAACCCTGGAGACAACTG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTGCAATTCTTCCTTGTaGGTTAGAACACTCCACACA +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKCNSSL*VRTLHT
Trigger: TGTGTGGAGTGTTCTAACCAACAAGGAAGAATTGCA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTATATACTTGCTAGTTTaGCGCCACGAAAAACCTGTC +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTAIYLLV*RHEKPV
Trigger: GACAGGTTTTTCGTGGCGCAAAACTAGCAAGTATAT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGTGGGAAATGTGTCTTaGAACTTCATGCATTGCTGT +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKVGNVS*NFMHCC
Trigger: ACAGCAATGCATGAAGTTCAAAGACACATTTCCCAC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGAAGCAACTGTGTATTaGAGCCACATTGGTTGGTTA +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKEATVY*SHIGWL
Trigger: TAACCAACCAATGTGGCTCAAATACACAGTTGCTTC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTCAGGATGTAATCTTTaGCAACTGAATCCTGAGCCA +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTASGCNL*QLNPEP
Trigger: TGGCTCAGGATTCAGTTGCAAAAGATTACATCCTGA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTCAGGATGTAATCTTTaGCAACTGAATCCTGAGCCA +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKSGCNL*QLNPEP
Trigger: TGGCTCAGGATTCAGTTGCAAAAGATTACATCCTGA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGGTTCATCATCCTCCTTaGGTGTTTGTTCCAGTAATG +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKVHHPP*VFVPVM
Trigger: CATTACTGGAACAAACACCAAAGGAGGATGATGAAC...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGTTACTTTTGGAATTTaGGAGAGTACCTCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTAVTFGI*ESTSKA
Trigger: AGCCTTGGAGGTACTCTCCAAAATTCCAAAAGTAAC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTCTTCTTCTTTCTATTaGATGGCGCTCATAGGAACC +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTASSSFY*MALIGT
Trigger: GGTTCCTATGAGCGCCATCAAATAGAAAGAAGAAGA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTCTTCTTCTTTCTATTaGATGGCGCTCATAGGAACC +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKSSSFY*MALIGT
Trigger: GGTTCCTATGAGCGCCATCAAATAGAAAGAAGAAGA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCCAGCTATAGGAATTaGGATCTTGGTGCTCCTGTA +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAPSYRN*DLGAPV
Trigger: TACAGGAGCACCAAGATCCAAATTCCTATAGCTGGG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTGAAGAATCCCGGGACTaGAATGGGGTATTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAEESRD*NGVFSG
Trigger: ACCTGAAAATACCCCATTCAAGTCCCGGGATTCTTC...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTCTTGCATTGCCAGCTaGACGAAAGCAGACAAGTTG +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTASCIAS*TKADKL
Trigger: CAACTTGTCTGCTTTCGTCAAGCTGGCAATGCAAGA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGACATTTCTATTGTCATaGGAGTGTCCAGATGTGGCA +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKTFLLS*ECPDVA
Trigger: TGCCACATCTGGACACTCCAATGACAATAGAAATGT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTTCTGCTATGCAGTTTaGGTTGACCTGCTCCACATG +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAFCYAV*VDLLHM
Trigger: CATGTGGAGCAGGTCAACCAAAACTGCATAGCAGAA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560891.6
CDS GCA 90 bp TCTGCACCACAGGAGAAGAGCCGATTGCCCTGGATGATGTCAATCTaGATGACTCCAGCCCCAATGTTTCGAAATATGGACTGCTTAGCA +
Preference number: 5 (lower is better)
Translates to: SAPQEKSRLPWMMSI*MTPAPMFRNMDCLA
Trigger: TGCTAAGCAGTCCATATTTCGAAACATTGGGGCTGGAGTCATGCAGATTGACATCATCCAGGGCAATCGGCTCTTCTCCTGTGGTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000559769.1
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTGCATCCACTACAGCTaGATAGAGTCTCAGATTTTT +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTACIHYS*IESQIF
Trigger: AAAAATCTGAGACTCTATCAAGCTGTAGTGGATGCA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTTATTACACTCTGGGTaGGCTTCCATACAACATTTC +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTALLHSG*ASIQHF
Trigger: GAAATGTTGTATGGAAGCCAACCCAGAGTGTAATAA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTCATCACTCAGAGCTTTaGAATGTGAAGGTACATCAT +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTAHHSEL*NVKVHH
Trigger: ATGATGTACCTTCACATTCAAAAGCTCTGAGTGATG...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGCCAGTTATAGAGTaGAAATCTGAGTTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTAKPVIE*KSEFSS
Trigger: GGAGGAAAACTCAGATTTCAACTCTATAACTGGCTT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAAGCCAAACCACCACCTaGGGCCCCATGAAGGCTACA +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSSQTTT*GPMKAT
Trigger: TGTAGCCTTCATGGGGCCCAAGGTGGTGGTTTGGCT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTGAGATGAATTTGGTGTaGCGTGTTCTTCAATGCTTT +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTAEMNLV*RVLQCF
Trigger: AAAGCATTGAAGAACACGCAACACCAAATTCATCTC...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGAAATGCCAAAGTCGTTaGACTGGAAATGCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKKCQSR*TGNAEE
Trigger: TTCTTCTGCATTTCCAGTCAAACGACTTTGGCATTT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAGGCAAACATTTCTATaGTCATTGGAGTGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTARQTFL*SLECPD
Trigger: ATCTGGACACTCCAATGACAATAGAAATGTTTGCCT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTTTTTCAAATGGTGTATaGTCTCAAGAGCATGCTGTA +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTAFSNGV*SQEHAV
Trigger: TACAGCATGCTCTTGAGACAATACACCATTTGAAAA...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTGTGGGAAATGTGTCTTaGAACTTCATGCATTGCTGT +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAVGNVS*NFMHCC
Trigger: ACAGCAATGCATGAAGTTCAAAGACACATTTCCCAC...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTGCATTTCTAAGAGGTaGTTTCGAGGAACCTTTTAT +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKCISKR*FRGTFY
Trigger: ATAAAAGGTTCCTCGAAACAACCTCTTAGAAATGCA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTCGAGCAGTAGACTGTaGGCTCACAATATTAAACAC +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTASSSRL*AHNIKH
Trigger: GTGTTTAATATTGTGAGCCAACAGTCTACTGCTCGA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAGCTCTGTGGTATCTTaGTACTTTCTTCTGAAATTC +
Preference number: 5 (lower is better)
Translates to: METASHSRELVTAHCSTASSVVS*YFLLKF
Trigger: GAATTTCAGAAGAAAGTACAAAGATACCACAGAGCT...AGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTATACTGATCCTCTGGTaGACTTACTGTCTGATCTTC +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAILILW*TYCLIF
Trigger: GAAGATCAGACAGTAAGTCAACCAGAGGATCAGTAT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTGGCATCATTGTTCCTTaGAAAAGAAGCTTTGGCAAC +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAGIIVP*KRSFGN
Trigger: GTTGCCAAAGCTTCTTTTCAAAGGAACAATGATGCC...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGAGACTTGATGATAACTaGATGTTCATCATCCTCCTT +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKRLDDN*MFIILL
Trigger: AAGGAGGATGATGAACATCAAGTTATCATCAAGTCT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTCTTCTTCTTTCTATTaGATGGCGCTCATAGGAACC +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTASSSFY*MALIGT
Trigger: GGTTCCTATGAGCGCCATCAAATAGAAAGAAGAAGA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGATAATGCTTGGTAAATaGATGCAGAAAGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKIMLGK*MQKVML
Trigger: CAGCATCACTTTCTGCATCAATTTACCAAGCATTAT...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTGCAGTTTGGTTAACTaGCCAGATACTCAGAAAACC +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTACSLVN*PDTQKT
Trigger: GGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGCA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTACATTTCTATTGTCATaGGAGTGTCCAGATGTGGCA +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTATFLLS*ECPDVA
Trigger: TGCCACATCTGGACACTCCAATGACAATAGAAATGT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCCACAGCTAAGAAAGTTTACCACACAGGCATaGAACATTCTCATTAACATG +
Preference number: 5 (lower is better)
Translates to: RPLTAENWSLRTAPQLRKFTTQA*NILINM
Trigger: CATGTTAATGAGAATGTTCAATGCCTGTGTGGTAAA...CTTTCTTAGCTGTGGAGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS CCA 90 bp CTTGCTGAAAGCAGAGGTAGGGTGGTAGGCAGTGGTAGTGGAGACTaGAGCTGCTTTACTGTAGTTTCCTGTTGTGATTCTTGTAGCAAA +
Preference number: 5 (lower is better)
Translates to: LAESRGRVVGSGSGD*SCFTVVSCCDSCSK
Trigger: TTTGCTACAAGAATCACAACAGGAAACTACAGTAAAGCAGCTCCAGTCTCCACTACCACTGCCTACCACCCTACCTCTGCTTTCAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCAGTTGTCTCCAGGGTaGACAGCTCCGGTGAGGACC +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQQLSPG*TAPVRT
Trigger: GGTCCTCACCGGAGCTGTCAACCCTGGAGACAACTG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACCCCTGGGCATATACTaGCTAGTTTTGCGCCACGAA +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSPLGIY*LVLRHE
Trigger: TTCGTGGCGCAAAACTAGCAAGTATATGCCCAGGGG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCAGAAGCGTACTTTATaGTCAGAACAAGTTGTAACC +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAQKRTL*SEQVVT
Trigger: GGTTACAACTTGTTCTGACAATAAAGTACGCTTCTG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTATTCTAACAGCTGAGTaGGATGATATTGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAILTAE*DDIVEE
Trigger: CTCTTCCACAATATCATCCAACTCAGCTGTTAGAAT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTAAGCCAGTTATAGAGTaGAAATCTGAGTTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAKPVIE*KSEFSS
Trigger: GGAGGAAAACTCAGATTTCAACTCTATAACTGGCTT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTATAGGAATTTGGATCTaGGTGCTCCTGTATTTGTGT +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAIGIWI*VLLYLC
Trigger: ACACAAATACAGGAGCACCAAGATCCAAATTCCTAT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACAGGAGAAGAGCCGATaGCCCTGGATGATGTCAATC +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSQEKSR*PWMMSI
Trigger: GATTGACATCATCCAGGGCAATCGGCTCTTCTCCTG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS TCA 90 bp GACAGCTACTCCATCCTTACTGTTGGTTTGCTCAGTCACAATTCCTaGAAGCCTTCCATACATGAAGATATTCGCACCGACTCCCACTGT +
Preference number: 5 (lower is better)
Translates to: DSYSILTVGLLSHNS*KPSIHEDIRTDSHC
Trigger: ACAGTGGGAGTCGGTGCGAATATCTTCATGTATGGAAGGCTTTCAGGAATTGTGACTGAGCAAACCAACAGTAAGGATGGAGTAGCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS CCA 90 bp ACACCGCCTCCAAAAACAGCAGCCCACATTCGATTATTTAATGGGTaGGCTGCAAGCCGAAATAATTCACTGGAGGAATTTGTGGCAAGA +
Preference number: 5 (lower is better)
Translates to: TPPPKTAAHIRLFNG*AASRNNSLEEFVAR
Trigger: TCTTGCCACAAATTCCTCCAGTGAATTATTTCGGCTTGCAGCCCACCCATTAAATAATCGAATGTGGGCTGCTGTTTTTGGAGGCGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCAGTTGTCTCCAGGGTaGACAGCTCCGGTGAGGACC +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYQLSPG*TAPVRT
Trigger: GGTCCTCACCGGAGCTGTCAACCCTGGAGACAACTG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCTCCACACAGCTGACTaGGATGTTTCCATGCTTAGC +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENLHTAD*DVSMLS
Trigger: GCTAAGCATGGAAACATCCAAGTCAGCTGTGTGGAG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTTGCATTTCTAAGAGGTaGTTTCGAGGAACCTTTTAT +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTACISKR*FRGTFY
Trigger: ATAAAAGGTTCCTCGAAACAACCTCTTAGAAATGCA...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTCATCTAATAATTTCCTaGCATCCACTACAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAHLIIS*HPLQLD
Trigger: ATCAAGCTGTAGTGGATGCAAGGAAATTATTAGATG...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAGGCCTGCTGAAGGCGTaGCTCTTATTACTTCAACTG +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSGLLKA*LLLLQL
Trigger: CAGTTGAAGTAATAAGAGCAACGCCTTCAGCAGGCC...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTAAGAGTGCATCTGACTaGCTATACACAAACAGATTA +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAKSASD*LYTNRL
Trigger: TAATCTGTTTGTGTATAGCAAGTCAGATGCACTCTT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATACCCTTGCATGTTCTaGGCCAAAGTAAGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSYPCMF*AKVSWS
Trigger: GGACCAGCTTACTTTGGCCAAGAACATGCAAGGGTA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTAGACTTGATGATAACTaGATGTTCATCATCCTCCTT +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTARLDDN*MFIILL
Trigger: AAGGAGGATGATGAACATCAAGTTATCATCAAGTCT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTATAATGCTTGGTAAATaGATGCAGAAAGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAIMLGK*MQKVML
Trigger: CAGCATCACTTTCTGCATCAATTTACCAAGCATTAT...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAGTGGATGCACCTGACTaGCTGAATAGGATGTTGCAC +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSVDAPD*LNRMLH
Trigger: GTGCAACATCCTATTCAGCAAGTCAGGTGCATCCAC...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGGTCACTGCGCACTGCTGCAACACCACACTTGTaGCCTTGTGAATTAAAATAT +
Preference number: 5 (lower is better)
Translates to: RKEWKRPLTAENWSLRTAATPHL*PCELKY
Trigger: ATATTTTAATTCACAAGGCAACAAGTGTGGTGTTGC...AGCAGTGCGCAGTGACCAGTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS TCA 90 bp TCTTCTGGTAATAAAGTTTCTGCCCAGAGCCGGCACACACCATCATaGCATGAAGTTAACAACACATTACAGACAGAACCCCTGGGCATA +
Preference number: 5 (lower is better)
Translates to: SSGNKVSAQSRHTPS*HEVNNTLQTEPLGI
Trigger: TATGCCCAGGGGTTCTGTCTGTAATGTGTTGTTAACTTCATGTCATGATGGTGTGTGCCGGCTCTGGGCAGAAACTTTATTACCAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS TCA 90 bp ATTGTCTCAAGAGCATGCTGTATTCTGTCTTTGTGTCTTCCAGCATaGGAAAGGCTGCTGGCAATGCTGGAAGTGGTAGTCTCACAAATC +
Preference number: 5 (lower is better)
Translates to: IVSRACCILSLCLPA*ERLLAMLEVVVSQI
Trigger: GATTTGTGAGACTACCACTTCCAGCATTGCCAGCAGCCTTTCTCATGCTGGAAGACACAAAGACAGAATACAGCATGCTCTTGAGACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS TCA 90 bp ATTAGGAGTTGCTGTTTGGGTGCATACTGCAGTACCGTGGCACCATaGTCGTGGCACGTGAAACCTGAAGAAGAAAAACATCAGAGAATT +
Preference number: 5 (lower is better)
Translates to: IRSCCLGAYCSTVAP*SWHVKPEEEKHQRI
Trigger: AATTCTCTGATGTTTTTCTTCTTCAGGTTTCACGTGCCACGATCATGGTGCCACGGTACTGCAGTATGCACCCAAACAGCAACTCCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559769.1
CDS CCA 90 bp GGTTTTTCTGCAACCACGACTTTCGTCTTTCTGCATGCTCTCGTTTaGCCTGCAATCTTCTTCTTTCTATTTGATGGCGCTCATAGGAAC +
Preference number: 5 (lower is better)
Translates to: GFSATTTFVFLHALV*PAIFFFLFDGAHRN
Trigger: GTTCCTATGAGCGCCATCAAATAGAAAGAAGAAGATTGCAGGCCAAACGAGAGCATGCAGAAAGACGAAAGTCGTGGTTGCAGAAAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CCA 90 bp AATAAATTTTTCTTTGTAAGATGGTCTTTCTGCAGGCACCGGTGGTaGGGTAGCATCTTTTACAGGCCTTCCAGGGACGAGCATTCTCAT +
Preference number: 5 (lower is better)
Translates to: NKFFFVRWSFCRHRW*GSIFYRPSRDEHSH
Trigger: ATGAGAATGCTCGTCCCTGGAAGGCCTGTAAAAGATGCTACCCCACCACCGGTGCCTGCAGAAAGACCATCTTACAAAGAAAAATTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAACAGATACTGAGGTTTaGCACTGCCAGACACACTTC +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSTDTEV*HCQTHF
Trigger: GAAGTGTGTCTGGCAGTGCAAAACCTCAGTATCTGT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACATGACAAAGGTCCTATaGGGTCTACACGCCACAGAA +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENMTKVL*GLHATE
Trigger: TTCTGTGGCGTGTAGACCCAATAGGACCTTTGTCAT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACAAGCACTTGCAGAATaGCAGTATGTGCCTAGACAG +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSQALAE*QYVPRQ
Trigger: CTGTCTAGGCACATACTGCAATTCTGCAAGTGCTTG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAGCCAAACCACCACCTaGGGCCCCATGAAGGCTACA +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYSQTTT*GPMKAT
Trigger: TGTAGCCTTCATGGGGCCCAAGGTGGTGGTTTGGCT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTTGTTGACGCAATACTaGCTGAAAGCAGAGGTAGGG +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENLLTQY*LKAEVG
Trigger: CCCTACCTCTGCTTTCAGCAAGTATTGCGTCAACAA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAGAAGAATCCCGGGACTaGAATGGGGTATTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSEESRD*NGVFSG
Trigger: ACCTGAAAATACCCCATTCAAGTCCCGGGATTCTTC...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATCTTGCATTGCCAGCTaGACGAAAGCAGACAAGTTG +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSSCIAS*TKADKL
Trigger: CAACTTGTCTGCTTTCGTCAAGCTGGCAATGCAAGA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAATTAGGAGTTGCTGTTaGGGTGCATACTGCAGTACC +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSIRSCC*GAYCST
Trigger: GGTACTGCAGTATGCACCCAAACAGCAACTCCTAAT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS GCA 90 bp CCTTGTTGGTTAGAACACTCCACACAGCTGACTTGGATGTTTCCATaGTTAGCACCAGGAATGATCTGTACACATTCAAAGTCATTTGCC +
Preference number: 5 (lower is better)
Translates to: PCWLEHSTQLTWMFP*LAPGMICTHSKSFA
Trigger: GGCAAATGACTTTGAATGTGTACAGATCATTCCTGGTGCTAAGCATGGAAACATCCAAGTCAGCTGTGTGGAGTGTTCTAACCAACAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000558507.1
ENST00000560421.5
ENST00000560891.6
CDS CCA 90 bp GCTGCAATTCTTCCTTGTTGGTTAGAACACTCCACACAGCTGACTTaGATGTTTCCATGCTTAGCACCAGGAATGATCTGTACACATTCA +
Preference number: 5 (lower is better)
Translates to: AAILPCWLEHSTQLT*MFPCLAPGMICTHS
Trigger: TGAATGTGTACAGATCATTCCTGGTGCTAAGCATGGAAACATCCAAGTCAGCTGTGTGGAGTGTTCTAACCAACAAGGAAGAATTGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000558507.1
ENST00000560421.5
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTTTGAACTTCATGCATaGCTGTCTGGTCGGGCATTA +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENFELHA*LSGRAL
Trigger: TAATGCCCGACCAGACAGCAATGCATGAAGTTCAAA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATTTGAGCCACATTGGTaGGTTATTGCGTCGAGTTCA +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSFEPHW*VIASSS
Trigger: TGAACTCGACGCAATAACCAACCAATGTGGCTCAAA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGGCACACTGGATAAATaGAAGAAGAACTCAGATGGC +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENGTLDK*KKNSDG
Trigger: GCCATCTGAGTTCTTCTTCAATTTATCCAGTGTGCC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGGGAGCCATCTTCTTTaGATACCCAGTCCAAATGTA +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENGSHLL*IPSPNV
Trigger: TACATTTGGACTGGGTATCAAAAGAAGATGGCTCCC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATCAGTGTCTCCAAATTaGACAGCATGCTTCCACTGT +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSSVSPN*TACFHC
Trigger: ACAGTGGAAGCATGCTGTCAAATTTGGAGACACTGA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGCAAAATGTTCAGTTTaGGCTGGTCTTCATCTTGGG +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENAKCSV*AGLHLG
Trigger: CCCAAGATGAAGACCAGCCAAAACTGAACATTTTGC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATACGAAAGCAGACAAGTaGCTGAGGCCGCGTCCATTC +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYTKADK*LRPRPF
Trigger: GAATGGACGCGGCCTCAGCAACTTGTCTGCTTTCGT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CCA 90 bp GGCGTTGCTCTTATTACTTCAACTGATTCTGGGAGATCAAGGGGTTaGCTATACACCAGTCTAGAACTCAGAATAAGTTTACTGGCAGTT +
Preference number: 5 (lower is better)
Translates to: GVALITSTDSGRSRG*LYTSLELRISLLAV
Trigger: AACTGCCAGTAAACTTATTCTGAGTTCTAGACTGGTGTATAGCCAACCCCTTGATCTCCCAGAATCAGTTGAAGTAATAAGAGCAACGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS CCA 90 bp TTGAAGGACCTCTTGTTTAACAAGGAAATGCCAAAGTCGTTTGACTaGAAATGCAGAAGAATCCCGGGACTTGAATGGGGTATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: LKDLLFNKEMPKSFD*KCRRIPGLEWGIFR
Trigger: CCTGAAAATACCCCATTCAAGTCCCGGGATTCTTCTGCATTTCCAGTCAAACGACTTTGGCATTTCCTTGTTAAACAAGAGGTCCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
ENST00000561079.1
CDS CCA 90 bp AGATCAGCTTCAACCTTGATGTGGCAATCTTCTGCTATGCAGTTTTaGTTGACCTGCTCCACATGTTCTTCTATAGACTCACTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: RSASTLMWQSSAMQF*LTCSTCSSIDSLCF
Trigger: AAAGCAGAGTGAGTCTATAGAAGAACATGTGGAGCAGGTCAACCAAAACTGCATAGCAGAAGATTGCCACATCAAGGTTGAAGCTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCCCCTGGGCATATACTaGCTAGTTTTGCGCCACGAA +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYPLGIY*LVLRHE
Trigger: TTCGTGGCGCAAAACTAGCAAGTATATGCCCAGGGG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGTGGGAAATGTGTCTTaGAACTTCATGCATTGCTGT +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENVGNVS*NFMHCC
Trigger: ACAGCAATGCATGAAGTTCAAAGACACATTTCCCAC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATCGAGCAGTAGACTGTaGGCTCACAATATTAAACAC +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSSSSRL*AHNIKH
Trigger: GTGTTTAATATTGTGAGCCAACAGTCTACTGCTCGA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGAAGCAACTGTGTATTaGAGCCACATTGGTTGGTTA +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENEATVY*SHIGWL
Trigger: TAACCAACCAATGTGGCTCAAATACACAGTTGCTTC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTGGGAGATCAAGGGGTaGGCTATACACCAGTCTAGA +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQWEIKG*AIHQSR
Trigger: TCTAGACTGGTGTATAGCCAACCCCTTGATCTCCCA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAACTCCATCCTTACTGTaGGTTTGCTCAGTCACAATT +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSTPSLL*VCSVTI
Trigger: AATTGTGACTGAGCAAACCAACAGTAAGGATGGAGT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACACTCCATCCTTACTGTaGGTTTGCTCAGTCACAATT +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENTPSLL*VCSVTI
Trigger: AATTGTGACTGAGCAAACCAACAGTAAGGATGGAGT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTACCCTTGCATGTTCTaGGCCAAAGTAAGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQYPCMF*AKVSWS
Trigger: GGACCAGCTTACTTTGGCCAAGAACATGCAAGGGTA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGTTCATCATCCTCCTTaGGTGTTTGTTCCAGTAATG +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENVHHPP*VFVPVM
Trigger: CATTACTGGAACAAACACCAAAGGAGGATGATGAAC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAGTTACTTTTGGAATTTaGGAGAGTACCTCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSVTFGI*ESTSKA
Trigger: AGCCTTGGAGGTACTCTCCAAAATTCCAAAAGTAAC...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACTGATTTCCTTCTGTTaGACTGTAGCTATGACTGTC +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSLISFC*TVAMTV
Trigger: GACAGTCATAGCTACAGTCAAACAGAAGGAAATCAG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251076.9
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAATTCACTGGAGGAATTaGTGGCAAGAGCATGTATCA +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSIHWRN*WQEHVS
Trigger: TGATACATGCTCTTGCCACAAATTCCTCCAGTGAAT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCTCTTGAAGGACCTCTaGTTTAACAAGGAAATGCCA +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENLLKDL*FNKEMP
Trigger: TGGCATTTCCTTGTTAAACAAGAGGTCCTTCAAGAG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTTGCTGAATAGGATGTaGCACTGGGTTGATAAAGAG +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENLLNRM*HWVDKE
Trigger: CTCTTTATCAACCCAGTGCAACATCCTATTCAGCAA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATTGCTGAATAGGATGTaGCACTGGGTTGATAAAGAG +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSLLNRM*HWVDKE
Trigger: CTCTTTATCAACCCAGTGCAACATCCTATTCAGCAA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGTGGATGCACCTGACTaGCTGAATAGGATGTTGCAC +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQVDAPD*LNRMLH
Trigger: GTGCAACATCCTATTCAGCAAGTCAGGTGCATCCAC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAACGAAAGCAGACAAGTaGCTGAGGCCGCGTCCATTC +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTTKADK*LRPRPF
Trigger: GAATGGACGCGGCCTCAGCAACTTGTCTGCTTTCGT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACTGATTTCCTTCTGTTaGACTGCTGTAGCTATGACT +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSLISFC*TAVAMT
Trigger: AGTCATAGCTACAGCAGTCAAACAGAAGGAAATCAG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543779.6
ENST00000560891.6
CDS TCA 90 bp TGGCTATACACCAGTCTAGAACTCAGAATAAGTTTACTGGCAGTTTaGAGATTGGCAATTGATGAAGAATGTGGCATGGGGCTCACACTA +
Preference number: 5 (lower is better)
Translates to: WLYTSLELRISLLAV*RLAIDEECGMGLTL
Trigger: TAGTGTGAGCCCCATGCCACATTCTTCATCAATTGCCAATCTTCAAACTGCCAGTAAACTTATTCTGAGTTCTAGACTGGTGTATAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS TCA 90 bp ACTAAACCAACAGCATCGTCTTCCTCTTCATCTAAGGCACTGTCGTaGTCTTCACCCCAATCAAGATTAAGAGGTTCCTCATCAACTTTT +
Preference number: 5 (lower is better)
Translates to: TKPTASSSSSSKALS*SSPQSRLRGSSSTF
Trigger: AAAAGTTGATGAGGAACCTCTTAATCTTGATTGGGGTGAAGATCACGACAGTGCCTTAGATGAAGAGGAAGACGATGCTGTTGGTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS GCA 90 bp CCTAGTGGTAAAGTGATGACAGCTACTCCATCCTTACTGTTGGTTTaGTCAGTCACAATTCCTGAAAGCCTTCCATACATGAAGATATTC +
Preference number: 5 (lower is better)
Translates to: PSGKVMTATPSLLLV*SVTIPESLPYMKIF
Trigger: GAATATCTTCATGTATGGAAGGCTTTCAGGAATTGTGACTGAGCAAACCAACAGTAAGGATGGAGTAGCTGTCATCACTTTACCACTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS GCA 90 bp AGTATAATCTCGAGTACCATCTTTTCCTACGGTGACTGTTTCCTTTaGTGTACTGCCACTTACACTAATAGTTCGAGAGAGATGTCGCTT +
Preference number: 5 (lower is better)
Translates to: SIISSTIFSYGDCFL*CTATYTNSSREMSL
Trigger: AAGCGACATCTCTCTCGAACTATTAGTGTAAGTGGCAGTACAGCAAAGGAAACAGTCACCGTAGGAAAAGATGGTACTCGAGATTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS GCA 90 bp GCTGACTCCAGTCATACTGTGATGAAGTTACATTTGACCATTCAATaGCAGAACTTCCATTGCCATCACTCAGAGCTTTTGAATGTGAAG +
Preference number: 5 (lower is better)
Translates to: ADSSHTVMKLHLTIQ*QNFHCHHSELLNVK
Trigger: CTTCACATTCAAAAGCTCTGAGTGATGGCAATGGAAGTTCTGGCATTGAATGGTCAAATGTAACTTCATCACAGTATGACTGGAGTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS GCA 90 bp CAGGCCATTGAGCAGGAGATGAATTTGGTGTTGCGTGTTCTTCAATaGTTTCTGTCCTTAGTCTTCTACGATCACTTAAAAGAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: QAIEQEMNLVLRVLQ*FLSLVFYDHLKEVL
Trigger: AAGGACTTCTTTTAAGTGATCGTAGAAGACTAAGGACAGAAAGCATTGAAGAACACGCAACACCAAATTCATCTCCTGCTCAATGGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGACAGATACTGAGGTTTaGCACTGCCAGACACACTTC +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQTDTEV*HCQTHF
Trigger: GAAGTGTGTCTGGCAGTGCAAAACCTCAGTATCTGT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTGCCAACCAAGACATTaGGAATATCTGTGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQCQPRH*EYLWQG
Trigger: ACCCTGCCACAGATATTCCAAATGTCTTGGTTGGCA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGATGACAAAGGTCCTATaGGGTCTACACGCCACAGAA +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQMTKVL*GLHATE
Trigger: TTCTGTGGCGTGTAGACCCAATAGGACCTTTGTCAT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACAGAAGCGTACTTTATaGTCAGAACAAGTTGTAACC +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSQKRTL*SEQVVT
Trigger: GGTTACAACTTGTTCTGACAATAAAGTACGCTTCTG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATTATTACACTCTGGGTaGGCTTCCATACAACATTTC +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSLLHSG*ASIQHF
Trigger: GAAATGTTGTATGGAAGCCAACCCAGAGTGTAATAA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAATAAGATATCTATCCTaGCTCAAGAGTGCATCTGAC +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSIRYLS*LKSASD
Trigger: GTCAGATGCACTCTTGAGCAAGGATAGATATCTTAT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAAAGGTCGAATGATCTaGCATTGCTGCCTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQKGRMI*HCCLFC
Trigger: GCAGAAGAGGCAGCAATGCAAGATCATTCGACCTTT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACAAGTTCTTCTCAGTTTaGAGACCTAAGGTTGCCAAA +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENKFFSV*RPKVAK
Trigger: TTTGGCAACCTTAGGTCTCAAAACTGAGAAGAACTT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAGTGATGAAGTTACATTaGACCATTCAATGCCAGAAC +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSVMKLH*TIQCQN
Trigger: GTTCTGGCATTGAATGGTCAAATGTAACTTCATCAC...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACCATCAACTTTTACTATaGGCTGACTCCAGTCATACT +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENHQLLL*ADSSHT
Trigger: AGTATGACTGGAGTCAGCCAATAGTAAAAGTTGATG...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCACATCAACTTTTACTATaGGCTGACTCCAGTCATACT +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSHQLLL*ADSSHT
Trigger: AGTATGACTGGAGTCAGCCAATAGTAAAAGTTGATG...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAAAGCCAGTTATAGAGTaGAAATCTGAGTTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSKPVIE*KSEFSS
Trigger: GGAGGAAAACTCAGATTTCAACTCTATAACTGGCTT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACGAGATGAATTTGGTGTaGCGTGTTCTTCAATGCTTT +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENEMNLV*RVLQCF
Trigger: AAAGCATTGAAGAACACGCAACACCAAATTCATCTC...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCCCAGCTATAGGAATTaGGATCTTGGTGCTCCTGTA +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQPSYRN*DLGAPV
Trigger: TACAGGAGCACCAAGATCCAAATTCCTATAGCTGGG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGAAGAATCCCGGGACTaGAATGGGGTATTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQEESRD*NGVFSG
Trigger: ACCTGAAAATACCCCATTCAAGTCCCGGGATTCTTC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACAGGCAAACATTTCTATaGTCATTGGAGTGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENRQTFL*SLECPD
Trigger: ATCTGGACACTCCAATGACAATAGAAATGTTTGCCT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCAAGGCAAACATTTCTATaGTCATTGGAGTGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSRQTFL*SLECPD
Trigger: ATCTGGACACTCCAATGACAATAGAAATGTTTGCCT...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGAGAAGAGCCGATaGCCCTGGATGATGTCAATC +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTQEKSR*PWMMSI
Trigger: GATTGACATCATCCAGGGCAATCGGCTCTTCTCCTG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGCTATGCAGTTTTGGTaGACCTGCTCCACATGTTCT +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQAMQFW*TCSTCS
Trigger: AGAACATGTGGAGCAGGTCAACCAAAACTGCATAGC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560891.6
CDS GCA 90 bp ACCAAGTCTATAGATCTAAGAAGAACCCATCTTGACTTAACTCCTTaGTTGATACTACCACCTAGTGGTAAAGTGATGACAGCTACTCCA +
Preference number: 5 (lower is better)
Translates to: TKSIDLRRTHLDLTP*LILPPSGKVMTATP
Trigger: TGGAGTAGCTGTCATCACTTTACCACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTCAAGATGGGTTCTTCTTAGATCTATAGACTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS GCA 90 bp ACTGTGATGAAGTTACATTTGACCATTCAATGCCAGAACTTCCATTaGCATCACTCAGAGCTTTTGAATGTGAAGGTACATCATCCATCC +
Preference number: 5 (lower is better)
Translates to: TVMKLHLTIQCQNFH*HHSELLNVKVHHPS
Trigger: GGATGGATGATGTACCTTCACATTCAAAAGCTCTGAGTGATGGCAATGGAAGTTCTGGCATTGAATGGTCAAATGTAACTTCATCACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS GCA 90 bp TCAACCTTGATGTGGCAATCTTCTGCTATGCAGTTTTGGTTGACCTaGTCCACATGTTCTTCTATAGACTCACTCTGCTTTCTTTTCTTA +
Preference number: 5 (lower is better)
Translates to: STLMWQSSAMQFWLT*STCSSIDSLCFLFL
Trigger: TAAGAAAAGAAAGCAGAGTGAGTCTATAGAAGAACATGTGGAGCAGGTCAACCAAAACTGCATAGCAGAAGATTGCCACATCAAGGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560891.6
CDS CCA 90 bp CAATCTTCTTCTTTCTATTTGATGGCGCTCATAGGAACCAATATCTaGTTTGTCTACCATTTCTTCCTGATCCAGCAGATCACTCTCTAC +
Preference number: 5 (lower is better)
Translates to: QSSSFYLMALIGTNI*FVYHFFLIQQITLY
Trigger: GTAGAGAGTGATCTGCTGGATCAGGAAGAAATGGTAGACAAACCAGATATTGGTTCCTATGAGCGCCATCAAATAGAAAGAAGAAGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATACAGATACTGAGGTTTaGCACTGCCAGACACACTTC +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYTDTEV*HCQTHF
Trigger: GAAGTGTGTCTGGCAGTGCAAAACCTCAGTATCTGT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTTTGAACTTCATGCATaGCTGTCTGGTCGGGCATTA +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQFELHA*LSGRAL
Trigger: TAATGCCCGACCAGACAGCAATGCATGAAGTTCAAA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAATGACAGAGTGCATTaGCATGGTGGGAAATGTGTC +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQNDRVH*HGGKCV
Trigger: GACACATTTCCCACCATGCAAATGCACTCTGTCATT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTGCCAACCAAGACATTaGGAATATCTGTGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYCQPRH*EYLWQG
Trigger: ACCCTGCCACAGATATTCCAAATGTCTTGGTTGGCA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTGCATTTCTAAGAGGTaGTTTCGAGGAACCTTTTAT +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENCISKR*FRGTFY
Trigger: ATAAAAGGTTCCTCGAAACAACCTCTTAGAAATGCA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATATGACAAAGGTCCTATaGGGTCTACACGCCACAGAA +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYMTKVL*GLHATE
Trigger: TTCTGTGGCGTGTAGACCCAATAGGACCTTTGTCAT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCAAGCACTTGCAGAATaGCAGTATGTGCCTAGACAG +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYQALAE*QYVPRQ
Trigger: CTGTCTAGGCACATACTGCAATTCTGCAAGTGCTTG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTTTGAGCCACATTGGTaGGTTATTGCGTCGAGTTCA +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQFEPHW*VIASSS
Trigger: TGAACTCGACGCAATAACCAACCAATGTGGCTCAAA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGGCCTGCTGAAGGCGTaGCTCTTATTACTTCAACTG +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTGLLKA*LLLLQL
Trigger: CAGTTGAAGTAATAAGAGCAACGCCTTCAGCAGGCC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGGCACACTGGATAAATaGAAGAAGAACTCAGATGGC +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQGTLDK*KKNSDG
Trigger: GCCATCTGAGTTCTTCTTCAATTTATCCAGTGTGCC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACAAGAGTGCATCTGACTaGCTATACACAAACAGATTA +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENKSASD*LYTNRL
Trigger: TAATCTGTTTGTGTATAGCAAGTCAGATGCACTCTT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGACTTAACTCCTTGCTaGATACTACCACCTAGTGGT +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQDLTPC*ILPPSG
Trigger: ACCACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACAGACTTGATGATAACTaGATGTTCATCATCCTCCTT +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENRLDDN*MFIILL
Trigger: AAGGAGGATGATGAACATCAAGTTATCATCAAGTCT...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCCCAGCTATAGGAATTaGGATCTTGGTGCTCCTGTA +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYPSYRN*DLGAPV
Trigger: TACAGGAGCACCAAGATCCAAATTCCTATAGCTGGG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGGATGTTGCACTGGGTaGATAAAGAGTTGTAGTGGA +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQGCCTG*IKSCSG
Trigger: TCCACTACAACTCTTTATCAACCCAGTGCAACATCC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGTGGATGCACCTGACTaGCTGAATAGGATGTTGCAC +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTVDAPD*LNRMLH
Trigger: GTGCAACATCCTATTCAGCAAGTCAGGTGCATCCAC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTCTTGCATTGCCAGCTaGACGAAAGCAGACAAGTTG +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYSCIAS*TKADKL
Trigger: CAACTTGTCTGCTTTCGTCAAGCTGGCAATGCAAGA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATATTAGGAGTTGCTGTTaGGGTGCATACTGCAGTACC +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYIRSCC*GAYCST
Trigger: GGTACTGCAGTATGCACCCAAACAGCAACTCCTAAT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp GGTACATGCGCATTCATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATTTACCACACAGGCATaGAACATTCTCATTAACATG +
Preference number: 5 (lower is better)
Translates to: GTCAFIPPTCLDNTQLGSFTTQA*NILINM
Trigger: CATGTTAATGAGAATGTTCAATGCCTGTGTGGTAAA...TGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAATGAATGCGCATGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ACAGGAAAAATATTCAGCAGGAAAGAATGGAAACGGCCTCTCACAGCAGAGAACTTTACCACACAGGCATaGAACATTCTCATTAACATG +
Preference number: 5 (lower is better)
Translates to: TGKIFSRKEWKRPLTAENFTTQA*NILINM
Trigger: CATGTTAATGAGAATGTTCAATGCCTGTGTGGTAAA...GTTCTCTGCTGTGAGAGGCCGTTTCCATTCTTTCCTGCTGAATATTTTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS CCA 90 bp AACTGTATTATCAATTTCTTCCTCCTCTTCCAGAATATCATCTCCTaGAGGAGCCCACAACTGAATAGAATCAGTTGCTGTCAACAATCT +
Preference number: 5 (lower is better)
Translates to: NCIINFFLLFQNIIS*RSPQLNRISCCQQS
Trigger: AGATTGTTGACAGCAACTGATTCTATTCAGTTGTGGGCTCCTCCAGGAGATGATATTCTGGAAGAGGAGGAAGAAATTGATAATACAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560421.5
ENST00000560891.6
CDS CCA 90 bp ATTGCGTCGAGTTCAATAATGCAGCCAGGTCGAGCAGTAGACTGTTaGCTCACAATATTAAACACTTCTCCAATAAGTTTTGAAGATTCT +
Preference number: 5 (lower is better)
Translates to: IASSSIMQPGRAVDC*LTILNTSPISFEDS
Trigger: AGAATCTTCAAAACTTATTGGAGAAGTGTTTAATATTGTGAGCCAACAGTCTACTGCTCGACCTGGCTGCATTATTGAACTCGACGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CCA 90 bp TTAATGGGTGGGCTGCAAGCCGAAATAATTCACTGGAGGAATTTGTaGCAAGAGCATGTATCAATAAACTTAAGTAAACAGCAACAACAG +
Preference number: 5 (lower is better)
Translates to: LMGGLQAEIIHWRNL*QEHVSINLSKQQQQ
Trigger: CTGTTGTTGCTGTTTACTTAAGTTTATTGATACATGCTCTTGCCACAAATTCCTCCAGTGAATTATTTCGGCTTGCAGCCCACCCATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTGCAATTCTTCCTTGTaGGTTAGAACACTCCACACA +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQCNSSL*VRTLHT
Trigger: TGTGTGGAGTGTTCTAACCAACAAGGAAGAATTGCA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAGCTGCAATTCTTCCTaGTTGGTTAGAACACTCCAC +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYSCNSS*LVRTLH
Trigger: GTGGAGTGTTCTAACCAACAAGGAAGAATTGCAGCT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAACAGATACTGAGGTTTaGCACTGCCAGACACACTTC +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTTDTEV*HCQTHF
Trigger: GAAGTGTGTCTGGCAGTGCAAAACCTCAGTATCTGT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTTTGAACTTCATGCATaGCTGTCTGGTCGGGCATTA +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYFELHA*LSGRAL
Trigger: TAATGCCCGACCAGACAGCAATGCATGAAGTTCAAA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAATGACAGAGTGCATTaGCATGGTGGGAAATGTGTC +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYNDRVH*HGGKCV
Trigger: GACACATTTCCCACCATGCAAATGCACTCTGTCATT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAATGACAAAGGTCCTATaGGGTCTACACGCCACAGAA +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTMTKVL*GLHATE
Trigger: TTCTGTGGCGTGTAGACCCAATAGGACCTTTGTCAT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCAACAAAGCAAGCACTaGCAGAATTGCAGTATGTGC +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYQQSKH*QNCSMC
Trigger: GCACATACTGCAATTCTGCAAGTGCTTGCTTTGTTG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTCGAGCAGTAGACTGTaGGCTCACAATATTAAACAC +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQSSSRL*AHNIKH
Trigger: GTGTTTAATATTGTGAGCCAACAGTCTACTGCTCGA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGAAGCAACTGTGTATTaGAGCCACATTGGTTGGTTA +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQEATVY*SHIGWL
Trigger: TAACCAACCAATGTGGCTCAAATACACAGTTGCTTC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGGCACACTGGATAAATaGAAGAAGAACTCAGATGGC +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYGTLDK*KKNSDG
Trigger: GCCATCTGAGTTCTTCTTCAATTTATCCAGTGTGCC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGACTCCATCCTTACTGTaGGTTTGCTCAGTCACAATT +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQTPSLL*VCSVTI
Trigger: AATTGTGACTGAGCAAACCAACAGTAAGGATGGAGT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGACTTAACTCCTTGCTaGATACTACCACCTAGTGGT +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYDLTPC*ILPPSG
Trigger: ACCACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAAAGGTCGAATGATCTaGCATTGCTGCCTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTKGRMI*HCCLFC
Trigger: GCAGAAGAGGCAGCAATGCAAGATCATTCGACCTTT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGGCATCATTGTTCCTTaGAAAAGAAGCTTTGGCAAC +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQGIIVP*KRSFGN
Trigger: GTTGCCAAAGCTTCTTTTCAAAGGAACAATGATGCC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTCAGGATGTAATCTTTaGCAACTGAATCCTGAGCCA +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQSGCNL*QLNPEP
Trigger: TGGCTCAGGATTCAGTTGCAAAAGATTACATCCTGA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGTTCATCATCCTCCTTaGGTGTTTGTTCCAGTAATG +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQVHHPP*VFVPVM
Trigger: CATTACTGGAACAAACACCAAAGGAGGATGATGAAC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTCTTCTTCTTTCTATTaGATGGCGCTCATAGGAACC +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQSSSFY*MALIGT
Trigger: GGTTCCTATGAGCGCCATCAAATAGAAAGAAGAAGA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATTGTTGACGCAATACTaGCTGAAAGCAGAGGTAGGG +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLLTQY*LKAEVG
Trigger: CCCTACCTCTGCTTTCAGCAAGTATTGCGTCAACAA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGCAAAATGTTCAGTTTaGGCTGGTCTTCATCTTGGG +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYAKCSV*AGLHLG
Trigger: CCCAAGATGAAGACCAGCCAAAACTGAACATTTTGC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACCCAGCTATAGGAATTaGGATCTTGGTGCTCCTGTA +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTPSYRN*DLGAPV
Trigger: TACAGGAGCACCAAGATCCAAATTCCTATAGCTGGG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCTCTTGAAGGACCTCTaGTTTAACAAGGAAATGCCA +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQLLKDL*FNKEMP
Trigger: TGGCATTTCCTTGTTAAACAAGAGGTCCTTCAAGAG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGGATGTTGCACTGGGTaGATAAAGAGTTGTAGTGGA +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYGCCTG*IKSCSG
Trigger: TCCACTACAACTCTTTATCAACCCAGTGCAACATCC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATCTTGCATTGCCAGCTaGACGAAAGCAGACAAGTTG +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTSCIAS*TKADKL
Trigger: CAACTTGTCTGCTTTCGTCAAGCTGGCAATGCAAGA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTGCAGTTTGGTTAACTaGCCAGATACTCAGAAAACC +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQCSLVN*PDTQKT
Trigger: GGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGCA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAGATCAGCTTCAACCTaGATGTGGCAATCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYRSAST*MWQSSA
Trigger: AGCAGAAGATTGCCACATCAAGGTTGAAGCTGATCT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560891.6
CDS TCA 90 bp AGAGGACTGTCTCCTTTTTACTTCATGATGATCCTGAGGTATAATTaGAGACTTCCAACCAGTCATAGGATACCACACTTTCAAAAGACA +
Preference number: 5 (lower is better)
Translates to: RGLSPFYFMMILRYN*RLPTSHRIPHFQKT
Trigger: TGTCTTTTGAAAGTGTGGTATCCTATGACTGGTTGGAAGTCTTCAATTATACCTCAGGATCATCATGAAGTAAAAAGGAGACAGTCCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS TCA 90 bp AGAACAGTGGTAAAGGCAGACTTATCAGCAAAAGTGACTGCCCACTaGTTTAAAGAACCATCTATGTGTTTAGAGATCATCATTACTGTG +
Preference number: 5 (lower is better)
Translates to: RTVVKADLSAKVTAH*FKEPSMCLEIIITV
Trigger: CACAGTAATGATGATCTCTAAACACATAGATGGTTCTTTAAATCAGTGGGCAGTCACTTTTGCTGATAAGTCTGCCTTTACCACTGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS TCA 90 bp ACCCTTGAATCAAGTACACTCCCAACCTTAACCAAATCATCAAGATaGATTGTTTGTTCTAAAACCCACTCTGATCCTCCTGTAGATTCA +
Preference number: 5 (lower is better)
Translates to: TLESSTLPTLTKSSR*IVCSKTHSDPPVDS
Trigger: TGAATCTACAGGAGGATCAGAGTGGGTTTTAGAACAAACAATTCATCTTGATGATTTGGTTAAGGTTGGGAGTGTACTTGATTCAAGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS GCA 90 bp CATATTAGATTTAAAGGTCGAATGATCTTGCATTGCTGCCTCTTCTaGATTAGAACTATCAGCTTCAGTGTCTCCAAATTTGACAGCATG +
Preference number: 5 (lower is better)
Translates to: HIRFKGRMILHCCLF*IRTISFSVSKFDSM
Trigger: CATGCTGTCAAATTTGGAGACACTGAAGCTGATAGTTCTAATGCAGAAGAGGCAGCAATGCAAGATCATTCGACCTTTAAATCTAATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS GCA 90 bp TTTTCTTGCCAGCATATTAGATTTAAAGGTCGAATGATCTTGCATTaGTGCCTCTTCTGCATTAGAACTATCAGCTTCAGTGTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: FSCQHIRFKGRMILH*CLFCIRTISFSVSK
Trigger: TTTGGAGACACTGAAGCTGATAGTTCTAATGCAGAAGAGGCAGCAATGCAAGATCATTCGACCTTTAAATCTAATATGCTGGCAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTGCAATTCTTCCTTGTaGGTTAGAACACTCCACACA +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYCNSSL*VRTLHT
Trigger: TGTGTGGAGTGTTCTAACCAACAAGGAAGAATTGCA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAGCTGCAATTCTTCCTaGTTGGTTAGAACACTCCAC +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTSCNSS*LVRTLH
Trigger: GTGGAGTGTTCTAACCAACAAGGAAGAATTGCAGCT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGGATCCCATGCTAAGTaGTATGTCACAGAACTCAAA +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYGSHAK*YVTELK
Trigger: TTTGAGTTCTGTGACATACAACTTAGCATGGGATCC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATATATACTTGCTAGTTTaGCGCCACGAAAAACCTGTC +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYIYLLV*RHEKPV
Trigger: GACAGGTTTTTCGTGGCGCAAAACTAGCAAGTATAT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATTTGAACTTCATGCATaGCTGTCTGGTCGGGCATTA +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTFELHA*LSGRAL
Trigger: TAATGCCCGACCAGACAGCAATGCATGAAGTTCAAA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTGTGGTGAGAATCTTTaGTCGCATTTATACAGGCAT +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQCGENL*SHLYRH
Trigger: ATGCCTGTATAAATGCGACAAAAGATTCTCACCACA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAACAAAGCAAGCACTaGCAGAATTGCAGTATGTGC +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTQQSKH*QNCSMC
Trigger: GCACATACTGCAATTCTGCAAGTGCTTGCTTTGTTG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTGCATCCACTACAGCTaGATAGAGTCTCAGATTTTT +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQCIHYS*IESQIF
Trigger: AAAAATCTGAGACTCTATCAAGCTGTAGTGGATGCA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTCGAGCAGTAGACTGTaGGCTCACAATATTAAACAC +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYSSSRL*AHNIKH
Trigger: GTGTTTAATATTGTGAGCCAACAGTCTACTGCTCGA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGGGAGCCATCTTCTTTaGATACCCAGTCCAAATGTA +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTGSHLL*IPSPNV
Trigger: TACATTTGGACTGGGTATCAAAAGAAGATGGCTCCC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGATTCTAACAGCTGAGTaGGATGATATTGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQILTAE*DDIVEE
Trigger: CTCTTCCACAATATCATCCAACTCAGCTGTTAGAAT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGACTTGAAAGTACCCTaGCATGTTCTTGGCCAAAGT +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTDLKVP*HVLGQS
Trigger: ACTTTGGCCAAGAACATGCAAGGGTACTTTCAAGTC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGGCATCATTGTTCCTTaGAAAAGAAGCTTTGGCAAC +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYGIIVP*KRSFGN
Trigger: GTTGCCAAAGCTTCTTTTCAAAGGAACAATGATGCC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTCAGGATGTAATCTTTaGCAACTGAATCCTGAGCCA +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYSGCNL*QLNPEP
Trigger: TGGCTCAGGATTCAGTTGCAAAAGATTACATCCTGA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAAGTTCTTCTCAGTTTaGAGACCTAAGGTTGCCAAA +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQKFFSV*RPKVAK
Trigger: TTTGGCAACCTTAGGTCTCAAAACTGAGAAGAACTT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGTTACTTTTGGAATTTaGGAGAGTACCTCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYVTFGI*ESTSKA
Trigger: AGCCTTGGAGGTACTCTCCAAAATTCCAAAAGTAAC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCATCACTCAGAGCTTTaGAATGTGAAGGTACATCAT +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQHHSEL*NVKVHH
Trigger: ATGATGTACCTTCACATTCAAAAGCTCTGAGTGATG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGTGATGAAGTTACATTaGACCATTCAATGCCAGAAC +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQVMKLH*TIQCQN
Trigger: GTTCTGGCATTGAATGGTCAAATGTAACTTCATCAC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCATCAACTTTTACTATaGGCTGACTCCAGTCATACT +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQHQLLL*ADSSHT
Trigger: AGTATGACTGGAGTCAGCCAATAGTAAAAGTTGATG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAAGCCAGTTATAGAGTaGAAATCTGAGTTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQKPVIE*KSEFSS
Trigger: GGAGGAAAACTCAGATTTCAACTCTATAACTGGCTT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATACTCTCAGGAGATCTaGGTTTTTCTGCAACCACGA +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTYSQEI*VFLQPR
Trigger: TCGTGGTTGCAGAAAAACCAAGATCTCCTGAGAGTA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGAGATGAATTTGGTGTaGCGTGTTCTTCAATGCTTT +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQEMNLV*RVLQCF
Trigger: AAAGCATTGAAGAACACGCAACACCAAATTCATCTC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGCAAAATGTTCAGTTTaGGCTGGTCTTCATCTTGGG +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTAKCSV*AGLHLG
Trigger: CCCAAGATGAAGACCAGCCAAAACTGAACATTTTGC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATATTCACTGGAGGAATTaGTGGCAAGAGCATGTATCA +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYIHWRN*WQEHVS
Trigger: TGATACATGCTCTTGCCACAAATTCCTCCAGTGAAT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAAATGCCAAAGTCGTTaGACTGGAAATGCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQKCQSR*TGNAEE
Trigger: TTCTTCTGCATTTCCAGTCAAACGACTTTGGCATTT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCTCTTGAAGGACCTCTaGTTTAACAAGGAAATGCCA +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYLLKDL*FNKEMP
Trigger: TGGCATTTCCTTGTTAAACAAGAGGTCCTTCAAGAG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGGATGTTGCACTGGGTaGATAAAGAGTTGTAGTGGA +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTGCCTG*IKSCSG
Trigger: TCCACTACAACTCTTTATCAACCCAGTGCAACATCC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTTGCTGAATAGGATGTaGCACTGGGTTGATAAAGAG +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYLLNRM*HWVDKE
Trigger: CTCTTTATCAACCCAGTGCAACATCCTATTCAGCAA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTGCAGTTTGGTTAACTaGCCAGATACTCAGAAAACC +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYCSLVN*PDTQKT
Trigger: GGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGCA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATACATTTCTATTGTCATaGGAGTGTCCAGATGTGGCA +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYTFLLS*ECPDVA
Trigger: TGCCACATCTGGACACTCCAATGACAATAGAAATGT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAGGCAAACATTTCTATaGTCATTGGAGTGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQRQTFL*SLECPD
Trigger: ATCTGGACACTCCAATGACAATAGAAATGTTTGCCT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS GCA 90 bp CATCATGATATTTTTACTAAGAGAGCTTGCATCACCAGAGGGAAATaGAACAGGAATCCGAGAAGAAAAAGAAACCTGAACTTGTCTAAA +
Preference number: 5 (lower is better)
Translates to: HHDIFTKRACITRGK*NRNPRRKRNLNLSK
Trigger: TTTAGACAAGTTCAGGTTTCTTTTTCTTCTCGGATTCCTGTTGCATTTCCCTCTGGTGATGCAAGCTCTCTTAGTAAAAATATCATGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS GCA 90 bp TCGAATGAGCAAAGGATGAGTTCGAAGGTAGTTATAAAAACTAAATaGCACCGGGTTACAAGACTTGATGATAACTTGATGTTCATCATC +
Preference number: 5 (lower is better)
Translates to: SNEQRMSSKVVIKTK*HRVTRLDDNLMFII
Trigger: GATGATGAACATCAAGTTATCATCAAGTCTTGTAACCCGGTGGCATTTAGTTTTTATAACTACCTTCGAACTCATCCTTTGCTCATTCGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATGCAATTCTTCCTTGTaGGTTAGAACACTCCACACA +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTCNSSL*VRTLHT
Trigger: TGTGTGGAGTGTTCTAACCAACAAGGAAGAATTGCA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGGATCCCATGCTAAGTaGTATGTCACAGAACTCAAA +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTGSHAK*YVTELK
Trigger: TTTGAGTTCTGTGACATACAACTTAGCATGGGATCC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAATATACTTGCTAGTTTaGCGCCACGAAAAACCTGTC +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTIYLLV*RHEKPV
Trigger: GACAGGTTTTTCGTGGCGCAAAACTAGCAAGTATAT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTTTTCAAATGGTGTATaGTCTCAAGAGCATGCTGTA +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQFSNGV*SQEHAV
Trigger: TACAGCATGCTCTTGAGACAATACACCATTTGAAAA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGTGGGAAATGTGTCTTaGAACTTCATGCATTGCTGT +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTVGNVS*NFMHCC
Trigger: ACAGCAATGCATGAAGTTCAAAGACACATTTCCCAC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTGTGGTGAGAATCTTTaGTCGCATTTATACAGGCAT +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYCGENL*SHLYRH
Trigger: ATGCCTGTATAAATGCGACAAAAGATTCTCACCACA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGTGCATTTCTAAGAGGTaGTTTCGAGGAACCTTTTAT +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQCISKR*FRGTFY
Trigger: ATAAAAGGTTCCTCGAAACAACCTCTTAGAAATGCA...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTGCATCCACTACAGCTaGATAGAGTCTCAGATTTTT +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYCIHYS*IESQIF
Trigger: AAAAATCTGAGACTCTATCAAGCTGTAGTGGATGCA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGCATCTAATAATTTCCTaGCATCCACTACAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQHLIIS*HPLQLD
Trigger: ATCAAGCTGTAGTGGATGCAAGGAAATTATTAGATG...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAAGAGTGCATCTGACTaGCTATACACAAACAGATTA +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQKSASD*LYTNRL
Trigger: TAATCTGTTTGTGTATAGCAAGTCAGATGCACTCTT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGAGCTCTGTGGTATCTTaGTACTTTCTTCTGAAATTC +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQSSVVS*YFLLKF
Trigger: GAATTTCAGAAGAAAGTACAAAGATACCACAGAGCT...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAATACTGATCCTCTGGTaGACTTACTGTCTGATCTTC +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTILILW*TYCLIF
Trigger: GAAGATCAGACAGTAAGTCAACCAGAGGATCAGTAT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGTTCATCATCCTCCTTaGGTGTTTGTTCCAGTAATG +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTVHHPP*VFVPVM
Trigger: CATTACTGGAACAAACACCAAAGGAGGATGATGAAC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATAAGTTCTTCTCAGTTTaGAGACCTAAGGTTGCCAAA +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYKFFSV*RPKVAK
Trigger: TTTGGCAACCTTAGGTCTCAAAACTGAGAAGAACTT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCATCAACTTTTACTATaGGCTGACTCCAGTCATACT +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYHQLLL*ADSSHT
Trigger: AGTATGACTGGAGTCAGCCAATAGTAAAAGTTGATG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACTGATTTCCTTCTGTTaGACTGTAGCTATGACTGTC +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLISFC*TVAMTV
Trigger: GACAGTCATAGCTACAGTCAAACAGAAGGAAATCAG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251076.9
ENST00000449909.7
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAATTCACTGGAGGAATTaGTGGCAAGAGCATGTATCA +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTIHWRN*WQEHVS
Trigger: TGATACATGCTCTTGCCACAAATTCCTCCAGTGAAT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATTGCTGAATAGGATGTaGCACTGGGTTGATAAAGAG +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLLNRM*HWVDKE
Trigger: CTCTTTATCAACCCAGTGCAACATCCTATTCAGCAA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp CCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACAGGCAACACCACACTTGTaGCCTTGTGAATTAAAATAT +
Preference number: 5 (lower is better)
Translates to: PPTCLDNTQLGSYSNSTQATPHL*PCELKY
Trigger: ATATTTTAATTCACAAGGCAACAAGTGTGGTGTTGC...CTGTGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CCA 90 bp ACATTCGATTATTTAATGGGTGGGCTGCAAGCCGAAATAATTCACTaGAGGAATTTGTGGCAAGAGCATGTATCAATAAACTTAAGTAAA +
Preference number: 5 (lower is better)
Translates to: TFDYLMGGLQAEIIH*RNLWQEHVSINLSK
Trigger: TTTACTTAAGTTTATTGATACATGCTCTTGCCACAAATTCCTCCAGTGAATTATTTCGGCTTGCAGCCCACCCATTAAATAATCGAATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATTTTTCAAATGGTGTATaGTCTCAAGAGCATGCTGTA +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYFSNGV*SQEHAV
Trigger: TACAGCATGCTCTTGAGACAATACACCATTTGAAAA...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATGTGGTGAGAATCTTTaGTCGCATTTATACAGGCAT +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTCGENL*SHLYRH
Trigger: ATGCCTGTATAAATGCGACAAAAGATTCTCACCACA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATCATCTAATAATTTCCTaGCATCCACTACAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYHLIIS*HPLQLD
Trigger: ATCAAGCTGTAGTGGATGCAAGGAAATTATTAGATG...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATTATTACACTCTGGGTaGGCTTCCATACAACATTTC +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTLLHSG*ASIQHF
Trigger: GAAATGTTGTATGGAAGCCAACCCAGAGTGTAATAA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAATAAGATATCTATCCTaGCTCAAGAGTGCATCTGAC +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTIRYLS*LKSASD
Trigger: GTCAGATGCACTCTTGAGCAAGGATAGATATCTTAT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAATTCTAACAGCTGAGTaGGATGATATTGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTILTAE*DDIVEE
Trigger: CTCTTCCACAATATCATCCAACTCAGCTGTTAGAAT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACACATCACTCAGAGCTTTaGAATGTGAAGGTACATCAT +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTHHSEL*NVKVHH
Trigger: ATGATGTACCTTCACATTCAAAAGCTCTGAGTGATG...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATATAATGCTTGGTAAATaGATGCAGAAAGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYIMLGK*MQKVML
Trigger: CAGCATCACTTTCTGCATCAATTTACCAAGCATTAT...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAATAGGAATTTGGATCTaGGTGCTCCTGTATTTGTGT +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTIGIWI*VLLYLC
Trigger: ACACAAATACAGGAGCACCAAGATCCAAATTCCTAT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAAATGCCAAAGTCGTTaGACTGGAAATGCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTKCQSR*TGNAEE
Trigger: TTCTTCTGCATTTCCAGTCAAACGACTTTGGCATTT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp AGAAAGCAGAATTGCCTAGTGATGACTGTAGTGTGCCTTTTAACTGAAATGTATGCAACACCACACTTGTaGCCTTGTGAATTAAAATAT +
Preference number: 5 (lower is better)
Translates to: RKQNCLVMTVVCLLTEMYATPHL*PCELKY
Trigger: ATATTTTAATTCACAAGGCAACAAGTGTGGTGTTGC...ATACATTTCAGTTAAAAGGCACACTACAGTCATCACTAGGCAATTCTGCTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS GCA 90 bp AAAAACATCATCAGAAATAGCTGTTCCTTCAACAACACTTTTTCTTaGCAGCATATTAGATTTAAAGGTCGAATGATCTTGCATTGCTGC +
Preference number: 5 (lower is better)
Translates to: KNIIRNSCSFNNTFS*QHIRFKGRMILHCC
Trigger: GCAGCAATGCAAGATCATTCGACCTTTAAATCTAATATGCTGGCAAGAAAAAGTGTTGTTGAAGGAACAGCTATTTCTGATGATGTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS CCA 90 bp TCCAATGATAAATTTCTTTCTCATCACTTTTATTACACTCTGGGTTaGCTTCCATACAACATTTCCAGAAGCGTACTTTATTGTCAGAAC +
Preference number: 5 (lower is better)
Translates to: SNDKFLSHHFYYTLG*LPYNISRSVLYCQN
Trigger: GTTCTGACAATAAAGTACGCTTCTGGAAATGTTGTATGGAAGCCAACCCAGAGTGTAATAAAAGTGATGAGAAAGAAATTTATCATTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS CCA 90 bp TCTCTTCCAATGATAAATTTCTTTCTCATCACTTTTATTACACTCTaGGTTGGCTTCCATACAACATTTCCAGAAGCGTACTTTATTGTC +
Preference number: 5 (lower is better)
Translates to: SLPMINFFLITFITL*VGFHTTFPEAYFIV
Trigger: GACAATAAAGTACGCTTCTGGAAATGTTGTATGGAAGCCAACCCAGAGTGTAATAAAAGTGATGAGAAAGAAATTTATCATTGGAAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACATTTTCAAATGGTGTATaGTCTCAAGAGCATGCTGTA +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTFSNGV*SQEHAV
Trigger: TACAGCATGCTCTTGAGACAATACACCATTTGAAAA...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAAGACTTGATGATAACTaGATGTTCATCATCCTCCTT +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTRLDDN*MFIILL
Trigger: AAGGAGGATGATGAACATCAAGTTATCATCAAGTCT...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS-3UTR CAA 90 bp ATTCCACCAACCTGTTTAGATAATACTCAGCTTGGGTCATATTCAAATTCTACAGCAACACCACACTTGTaGCCTTGTGAATTAAAATAT +
Preference number: 5 (lower is better)
Translates to: IPPTCLDNTQLGSYSNSTATPHL*PCELKY
Trigger: ATATTTTAATTCACAAGGCAACAAGTGTGGTGTTGC...TGTAGAATTTGAATATGACCCAAGCTGAGTATTATCTAAACAGGTTGGTGGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS GCA 72 bp GCCGCCGCCGCCCGGGTCGCCGCTCAGCTGCGGAAATaGCCGGATGTTCCCACTGCCTGCTGCACCGGCGCA +
Preference number: 6 (lower is better)
Translates to: AAAARVAAQLRK*PDVPTACCTGA
Trigger: TGCGCCGGTGCAGCAGGCAGTGGGAACATCCGGGCATTTCCGCAGCTGAGCGGCGACCCGGGCGGCGGCGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251076.9
CDS TCA 72 bp GACAGAATGCGCGGGAGGTGCGACAAGCTCCGCGCCTaGCCCTCCTCGGGCTGCGAGAGCCGTTTCCCTCTG +
Preference number: 6 (lower is better)
Translates to: DRMRGRCDKLRA*PSSGCESRFPL
Trigger: CAGAGGGAAACGGCTCTCGCAGCCCGAGGAGGGTCAGGCGCGGAGCTTGTCGCACCTCCCGCGCATTCTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000558507.1
ENST00000560891.6
CDS GCA 72 bp CGCCGCTCAGCTGCGGAAATGCCCGGATGTTCCCACTaGCTGCTGCACCGGCGCACAAATGCGGGAGGGCAA +
Preference number: 6 (lower is better)
Translates to: RRSAAEMPGCSH*LLHRRTNAGGQ
Trigger: TTGCCCTCCCGCATTTGTGCGCCGGTGCAGCAGGCAGTGGGAACATCCGGGCATTTCCGCAGCTGAGCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251076.9
CDS GCA 72 bp ATGCAGATGCATCTCCGGAGCCCGGGCTGGACAGAATaGGCGGGAGGTGCGACAAGCTCCGCGCCTGACCCT +
Preference number: 6 (lower is better)
Translates to: MQMHLRSPGWTE*AGGATSSAPDP
Trigger: AGGGTCAGGCGCGGAGCTTGTCGCACCTCCCGCGCATTCTGTCCAGCCCGGGCTCCGGAGATGCATCTGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000558507.1
ENST00000560891.6
CDS CCA 72 bp GAGGACCTGATGCAGATGCATCTCCGGAGCCCGGGCTaGACAGAATGCGCGGGAGGTGCGACAAGCTCCGCG +
Preference number: 6 (lower is better)
Translates to: EDLMQMHLRSPG*TECAGGATSSA
Trigger: CGCGGAGCTTGTCGCACCTCCCGCGCATTCTGTCCAGCCCGGGCTCCGGAGATGCATCTGCATCAGGTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000558507.1
ENST00000560891.6
CDS GCA 72 bp CAGCTGCGGAAATGCCCGGATGTTCCCACTGCCTGCTaGACCGGCGCACAAATGCGGGAGGGCAAGGGTGCT +
Preference number: 6 (lower is better)
Translates to: QLRKCPDVPTAC*TGAQMREGKGA
Trigger: AGCACCCTTGCCCTCCCGCATTTGTGCGCCGGTGCAGCAGGCAGTGGGAACATCCGGGCATTTCCGCAGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251076.9
CDS GCA 72 bp GCTCAGCTGCGGAAATGCCCGGATGTTCCCACTGCCTaGTGCACCGGCGCACAAATGCGGGAGGGCAAGGGT +
Preference number: 6 (lower is better)
Translates to: AQLRKCPDVPTA*CTGAQMREGKG
Trigger: ACCCTTGCCCTCCCGCATTTGTGCGCCGGTGCAGCAGGCAGTGGGAACATCCGGGCATTTCCGCAGCTGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251076.9
CDS TCA 72 bp CAGTTGTCTCCAGGGTTGACAGCTCCGGTGAGGACCTaGTGCAGATGCATCTCCGGAGCCCGGGCTGGACAG +
Preference number: 6 (lower is better)
Translates to: QLSPGLTAPVRT*CRCISGARAGQ
Trigger: CTGTCCAGCCCGGGCTCCGGAGATGCATCTGCATCAGGTCCTCACCGGAGCTGTCAACCCTGGAGACAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000558507.1
ENST00000560891.6
CDS CCA 72 bp GTGCCATCTGCACCACAGGAGAAGAGCCGATTGCCCTaGATGATGTCAATCTGCATGACTCCAGCCCCAATG +
Preference number: 6 (lower is better)
Translates to: VPSAPQEKSRLP*MMSICMTPAPM
Trigger: CATTGGGGCTGGAGTCATGCAGATTGACATCATCCAGGGCAATCGGCTCTTCTCCTGTGGTGCAGATGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000559769.1
ENST00000560891.6
CDS CAA 72 bp TTCAGCGTGCCATCTGCACCACAGGAGAAGAGCCGATaGCCCTGGATGATGTCAATCTGCATGACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: FSVPSAPQEKSR*PWMMSICMTPA
Trigger: GGCTGGAGTCATGCAGATTGACATCATCCAGGGCAATCGGCTCTTCTCCTGTGGTGCAGATGGCACGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000559769.1
ENST00000560891.6
CDS GCA 72 bp AGCATTGGGCAAAACCCTGGTTTTCAGCGTGCCATCTaGACCACAGGAGAAGAGCCGATTGCCCTGGATGAT +
Preference number: 6 (lower is better)
Translates to: SIGQNPGFQRAI*TTGEEPIALDD
Trigger: ATCATCCAGGGCAATCGGCTCTTCTCCTGTGGTGCAGATGGCACGCTGAAAACCAGGGTTTTGCCCAATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000559769.1
ENST00000560891.6
CDS CCA 72 bp TTCTTTGTAAGATGGTCTTTCTGCAGGCACCGGTGGTaGGGTAGCATCTTTTACAGGCCTTCCAGGGACGAG +
Preference number: 6 (lower is better)
Translates to: FFVRWSFCRHRW*GSIFYRPSRDE
Trigger: CTCGTCCCTGGAAGGCCTGTAAAAGATGCTACCCCACCACCGGTGCCTGCAGAAAGACCATCTTACAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000559498.1
ENST00000560891.6
CDS TCA 72 bp TGCTGTTTGGGTGCATACTGCAGTACCGTGGCACCATaGTCGTGGCACGTGAAACCTATTGTCATTGGAGTG +
Preference number: 6 (lower is better)
Translates to: CCLGAYCSTVAP*SWHVKPIVIGV
Trigger: CACTCCAATGACAATAGGTTTCACGTGCCACGATCATGGTGCCACGGTACTGCAGTATGCACCCAAACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559059.1
CDS GCA 72 bp GTAGCCACTGTATCAGCCAAAGCTACAAGGAACATCTaGTCCAAACGGGTAAGGCCTGGTAGACTTGAGTGC +
Preference number: 6 (lower is better)
Translates to: VATVSAKATRNI*SKRVRPGRLEC
Trigger: GCACTCAAGTCTACCAGGCCTTACCCGTTTGGAGCAGATGTTCCTTGTAGCTTTGGCTGATACAGTGGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS GCA 72 bp CAGGAGAAGAGCCGATTGCCCTGGATGATGTCAATCTaGATGACTCCAGCCCCAATGTTTCGAAATATGGAC +
Preference number: 6 (lower is better)
Translates to: QEKSRLPWMMSI*MTPAPMFRNMD
Trigger: GTCCATATTTCGAAACATTGGGGCTGGAGTCATGCAGATTGACATCATCCAGGGCAATCGGCTCTTCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000559769.1
ENST00000560891.6
CDS CAA 90 bp GGCCCCATGAAGGCTACAGTAGCTGAGAAATACTCTCAGGAGATCTaGGTTTTTCTGCAACCACGACTTTCGTCTTTCTGCATGCTCTCG +
Preference number: 6 (lower is better)
Translates to: GPMKATVAEKYSQEI*VFLQPRLSSFCMLS
Trigger: CGAGAGCATGCAGAAAGACGAAAGTCGTGGTTGCAGAAAAACCAAGATCTCCTGAGAGTATTTCTCAGCTACTGTAGCCTTCATGGGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS TCA 72 bp AGAGCATGCTGTATTCTGTCTTTGTGTCTTCCAGCATaGGAAAGGCTGCTGGCAATGCTGGAAGTGGTAGTC +
Preference number: 6 (lower is better)
Translates to: RACCILSLCLPA*ERLLAMLEVVV
Trigger: GACTACCACTTCCAGCATTGCCAGCAGCCTTTCTCATGCTGGAAGACACAAAGACAGAATACAGCATGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS TCA 72 bp TGCTGTTTGGGTGCATACTGCAGTACCGTGGCACCATaGTCGTGGCACGTGAAACCTGAAGAAGAAAAACAT +
Preference number: 6 (lower is better)
Translates to: CCLGAYCSTVAP*SWHVKPEEEKH
Trigger: ATGTTTTTCTTCTTCAGGTTTCACGTGCCACGATCATGGTGCCACGGTACTGCAGTATGCACCCAAACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559769.1
CDS CAA 72 bp AACTCTTGCATTGCCAGCTTGACGAAAGCAGACAAGTaGCTGAGGCCGCGTCCATTCAAACATTCGTACACT +
Preference number: 6 (lower is better)
Translates to: NSCIASLTKADK*LRPRPFKHSYT
Trigger: AGTGTACGAATGTTTGAATGGACGCGGCCTCAGCAACTTGTCTGCTTTCGTCAAGCTGGCAATGCAAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000559868.1
ENST00000560891.6
CDS TCA 72 bp CAGAACCGTAGGCAGTGGCATTGGTACACTAAGTCGTaGGTAAGTTCTAGGACTTCCTTCTCTTTCTCCATC +
Preference number: 6 (lower is better)
Translates to: QNRRQWHWYTKS*VSSRTSFSFSI
Trigger: GATGGAGAAAGAGAAGGAAGTCCTAGAACTTACTCACGACTTAGTGTACCAATGCCACTGCCTACGGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS TCA 72 bp CCTACAGACATCCCCTCCTGGTGTAACAGCGTGTGGTaGGAATCTTTTGTCGCATTTATACAGGCATACATC +
Preference number: 6 (lower is better)
Translates to: PTDIPSWCNSVW*ESFVAFIQAYI
Trigger: GATGTATGCCTGTATAAATGCGACAAAAGATTCTCACCACACGCTGTTACACCAGGAGGGGATGTCTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CAA 72 bp GCAAGACTACGCAGGAAAGGATCAGGATGTAATCTTTaGCAACTGAATCCTGAGCCATCCTTTTGGCAACCC +
Preference number: 6 (lower is better)
Translates to: ARLRRKGSGCNL*QLNPEPSFWQP
Trigger: GGGTTGCCAAAAGGATGGCTCAGGATTCAGTTGCAAAAGATTACATCCTGATCCTTTCCTGCGTAGTCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS TCA 72 bp TCATGCATTGCTGTCTGGTCGGGCATTAATTCAGCATaGGTTACAAGAACAGATGACCTCCTCTGTCCTTTC +
Preference number: 6 (lower is better)
Translates to: SCIAVWSGINSA*VTRTDDLLCPF
Trigger: GAAAGGACAGAGGAGGTCATCTGTTCTTGTAACTCATGCTGAATTAATGCCCGACCAGACAGCAATGCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS TCA 72 bp AAACGGGTAAGGCCTGGTAGACTTGAGTGCATAAGATaGCTTGAAAGTACCCTTGCATGTTCTTGGCCAAAG +
Preference number: 6 (lower is better)
Translates to: KRVRPGRLECIR*LESTLACSWPK
Trigger: CTTTGGCCAAGAACATGCAAGGGTACTTTCAAGTCATCTTATGCACTCAAGTCTACCAGGCCTTACCCGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS TCA 72 bp ACAGCATCGTCTTCCTCTTCATCTAAGGCACTGTCGTaGTCTTCACCCCAATCAAGATTAAGAGGTTCCTCA +
Preference number: 6 (lower is better)
Translates to: TASSSSSSKALS*SSPQSRLRGSS
Trigger: TGAGGAACCTCTTAATCTTGATTGGGGTGAAGATCACGACAGTGCCTTAGATGAAGAGGAAGACGATGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CCA 72 bp ACTAAGTTCGGGAGGAATAAATTTTTCTTTGTAAGATaGTCTTTCTGCAGGCACCGGTGGTGGGGTAGCATC +
Preference number: 6 (lower is better)
Translates to: TKFGRNKFFFVR*SFCRHRWWGSI
Trigger: GATGCTACCCCACCACCGGTGCCTGCAGAAAGACCATCTTACAAAGAAAAATTTATTCCTCCCGAACTTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000559498.1
ENST00000560891.6
CDS CAA 72 bp TCTTCCTTGTTGGTTAGAACACTCCACACAGCTGACTaGGATGTTTCCATGCTTAGCACCAGGAATGATCTG +
Preference number: 6 (lower is better)
Translates to: SSLLVRTLHTAD*DVSMLSTRNDL
Trigger: CAGATCATTCCTGGTGCTAAGCATGGAAACATCCAAGTCAGCTGTGTGGAGTGTTCTAACCAACAAGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000558507.1
ENST00000560421.5
ENST00000560891.6
CDS CAA 90 bp AGCTGCAATTCTTCCTTGTTGGTTAGAACACTCCACACAGCTGACTaGGATGTTTCCATGCTTAGCACCAGGAATGATCTGTACACATTC +
Preference number: 6 (lower is better)
Translates to: SCNSSLLVRTLHTAD*DVSMLSTRNDLYTF
Trigger: GAATGTGTACAGATCATTCCTGGTGCTAAGCATGGAAACATCCAAGTCAGCTGTGTGGAGTGTTCTAACCAACAAGGAAGAATTGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000558507.1
ENST00000560421.5
ENST00000560891.6
CDS CAA 90 bp CTACCACCTAGTGGTAAAGTGATGACAGCTACTCCATCCTTACTGTaGGTTTGCTCAGTCACAATTCCTGAAAGCCTTCCATACATGAAG +
Preference number: 6 (lower is better)
Translates to: LPPSGKVMTATPSLL*VCSVTIPESLPYMK
Trigger: CTTCATGTATGGAAGGCTTTCAGGAATTGTGACTGAGCAAACCAACAGTAAGGATGGAGTAGCTGTCATCACTTTACCACTAGGTGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS CAA 90 bp AGCTGCTTTACTGTAGTTTCCTGTTGTGATTCTTGTAGCAAAAATTaGAGTTCCATCCTTACTGAAGCCAAACCACCACCTTGGGCCCCA +
Preference number: 6 (lower is better)
Translates to: SCFTVVSCCDSCSKN*SSILTEAKPPPWAP
Trigger: TGGGGCCCAAGGTGGTGGTTTGGCTTCAGTAAGGATGGAACTCAAATTTTTGCTACAAGAATCACAACAGGAAACTACAGTAAAGCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CAA 90 bp CAGATCAGCTTCAACCTTGATGTGGCAATCTTCTGCTATGCAGTTTaGGTTGACCTGCTCCACATGTTCTTCTATAGACTCACTCTGCTT +
Preference number: 6 (lower is better)
Translates to: QISFNLDVAIFCYAV*VDLLHMFFYRLTLL
Trigger: AAGCAGAGTGAGTCTATAGAAGAACATGTGGAGCAGGTCAACCAAAACTGCATAGCAGAAGATTGCCACATCAAGGTTGAAGCTGATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560891.6
CDS GCA 72 bp CTGCTGGCAATGCTGGAAGTGGTAGTCTCACAAATCTaGTCACCCAAAAGACAGTCTTCTGGTAATAAAGTT +
Preference number: 6 (lower is better)
Translates to: LLAMLEVVVSQI*SPKRQSSGNKV
Trigger: AACTTTATTACCAGAAGACTGTCTTTTGGGTGAGCAGATTTGTGAGACTACCACTTCCAGCATTGCCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS GCA 72 bp TCGAGTACCATCTTTTCCTACGGTGACTGTTTCCTTTaGTGTACTGCCACTTACACTAATAGTTCGAGAGAG +
Preference number: 6 (lower is better)
Translates to: SSTIFSYGDCFL*CTATYTNSSRE
Trigger: CTCTCTCGAACTATTAGTGTAAGTGGCAGTACAGCAAAGGAAACAGTCACCGTAGGAAAAGATGGTACTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS GCA 72 bp ATCTTGGTTTTTCTGCAACCACGACTTTCGTCTTTCTaGATGCTCTCGTTTGGCCTGCAATCTTCTTCTTTC +
Preference number: 6 (lower is better)
Translates to: ILVFLQPRLSSF*MLSFGLQSSSF
Trigger: GAAAGAAGAAGATTGCAGGCCAAACGAGAGCATGCAGAAAGACGAAAGTCGTGGTTGCAGAAAAACCAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CCA 72 bp CTCTTGTTTAACAAGGAAATGCCAAAGTCGTTTGACTaGAAATGCAGAAGAATCCCGGGACTTGAATGGGGT +
Preference number: 6 (lower is better)
Translates to: LLFNKEMPKSFD*KCRRIPGLEWG
Trigger: ACCCCATTCAAGTCCCGGGATTCTTCTGCATTTCCAGTCAAACGACTTTGGCATTTCCTTGTTAAACAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
ENST00000561079.1
CDS CAA 90 bp AGAGTGCATTTGCATGGTGGGAAATGTGTCTTTGAACTTCATGCATaGCTGTCTGGTCGGGCATTAATTCAGCATGAGTTACAAGAACAG +
Preference number: 6 (lower is better)
Translates to: RVHLHGGKCVFELHA*LSGRALIQHELQEQ
Trigger: CTGTTCTTGTAACTCATGCTGAATTAATGCCCGACCAGACAGCAATGCATGAAGTTCAAAGACACATTTCCCACCATGCAAATGCACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CAA 90 bp CAGATCAGCTTCAACCTTGATGTGGCAATCTTCTGCTATGCAGTTTaGGTTGACCTGCTCCACATGTTCTTCTATAGACTAAATACCACC +
Preference number: 6 (lower is better)
Translates to: QISFNLDVAIFCYAV*VDLLHMFFYRLNTT
Trigger: GGTGGTATTTAGTCTATAGAAGAACATGTGGAGCAGGTCAACCAAAACTGCATAGCAGAAGATTGCCACATCAAGGTTGAAGCTGATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558124.5
CDS TCA 72 bp GCTATACACAAACAGATTACTGTCGACGCTGACCCTTaGATCAAGTACACTCCCAACCTTAACCAAATCATC +
Preference number: 6 (lower is better)
Translates to: AIHKQITVDADP*IKYTPNLNQII
Trigger: GATGATTTGGTTAAGGTTGGGAGTGTACTTGATTCAAGGGTCAGCGTCGACAGTAATCTGTTTGTGTATAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS GCA 72 bp AAAGTGATGACAGCTACTCCATCCTTACTGTTGGTTTaGTCAGTCACAATTCCTGAAAGCCTTCCATACATG +
Preference number: 6 (lower is better)
Translates to: KVMTATPSLLLV*SVTIPESLPYM
Trigger: CATGTATGGAAGGCTTTCAGGAATTGTGACTGAGCAAACCAACAGTAAGGATGGAGTAGCTGTCATCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS GCA 72 bp ATGTGGCAATCTTCTGCTATGCAGTTTTGGTTGACCTaGTCCACATGTTCTTCTATAGACTCACTCTGCTTT +
Preference number: 6 (lower is better)
Translates to: MWQSSAMQFWLT*STCSSIDSLCF
Trigger: AAAGCAGAGTGAGTCTATAGAAGAACATGTGGAGCAGGTCAACCAAAACTGCATAGCAGAAGATTGCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560891.6
CDS CCA 72 bp CTTACTTTGCTTTTCTGTCAACCTACCTATTGTCATTaGAGTGTCCAGATGTGGCAACTAGACTTGAAGAGG +
Preference number: 6 (lower is better)
Translates to: LTLLFCQPTYCH*SVQMWQLDLKR
Trigger: CCTCTTCAAGTCTAGTTGCCACATCTGGACACTCCAATGACAATAGGTAGGTTGACAGAAAAGCAAAGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559868.1
CDS CCA 72 bp GACAAGGTATTAGTGAGCAAAGACCTAAAGGATCTATaGGAGCTATCCTTGGAGATAGCTGGAGGAAAAACA +
Preference number: 6 (lower is better)
Translates to: DKVLVSKDLKDL*ELSLEIAGGKT
Trigger: TGTTTTTCCTCCAGCTATCTCCAAGGATAGCTCCCATAGATCCTTTAGGTCTTTGCTCACTAATACCTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558507.1
CDS CAA 72 bp TTGCATGGTGGGAAATGTGTCTTTGAACTTCATGCATaGCTGTCTGGTCGGGCATTAATTCAGCATGAGTTA +
Preference number: 6 (lower is better)
Translates to: LHGGKCVFELHA*LSGRALIQHEL
Trigger: TAACTCATGCTGAATTAATGCCCGACCAGACAGCAATGCATGAAGTTCAAAGACACATTTCCCACCATGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CAA 72 bp TTGGCTGACTCCAGTCATACTGTGATGAAGTTACATTaGACCATTCAATGCCAGAACTTCCATTGCCATCAC +
Preference number: 6 (lower is better)
Translates to: LADSSHTVMKLH*TIQCQNFHCHH
Trigger: GTGATGGCAATGGAAGTTCTGGCATTGAATGGTCAAATGTAACTTCATCACAGTATGACTGGAGTCAGCCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CAA 72 bp ATGCTCTCGTTTGGCCTGCAATCTTCTTCTTTCTATTaGATGGCGCTCATAGGAACCAATATCTGGTTTGTC +
Preference number: 6 (lower is better)
Translates to: MLSFGLQSSSFY*MALIGTNIWFV
Trigger: GACAAACCAGATATTGGTTCCTATGAGCGCCATCAAATAGAAAGAAGAAGATTGCAGGCCAAACGAGAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CAA 72 bp TTCAACCTTGATGTGGCAATCTTCTGCTATGCAGTTTaGGTTGACCTGCTCCACATGTTCTTCTATAGACTC +
Preference number: 6 (lower is better)
Translates to: FNLDVAIFCYAV*VDLLHMFFYRL
Trigger: GAGTCTATAGAAGAACATGTGGAGCAGGTCAACCAAAACTGCATAGCAGAAGATTGCCACATCAAGGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560891.6
CDS CAA 90 bp TCTTTCTGCATGCTCTCGTTTGGCCTGCAATCTTCTTCTTTCTATTaGATGGCGCTCATAGGAACCAATATCTGGTTTGTCTACCATTTC +
Preference number: 6 (lower is better)
Translates to: SFCMLSFGLQSSSFY*MALIGTNIWFVYHF
Trigger: GAAATGGTAGACAAACCAGATATTGGTTCCTATGAGCGCCATCAAATAGAAAGAAGAAGATTGCAGGCCAAACGAGAGCATGCAGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS TCA 72 bp GCCCAAGGGCTCAAATATACAAACAGCATTACCATATaGAGCTGCAATTCTTCCTTGTTGGTTAGAACACTC +
Preference number: 6 (lower is better)
Translates to: AQGLKYTNSITI*SCNSSLLVRTL
Trigger: GAGTGTTCTAACCAACAAGGAAGAATTGCAGCTTCATATGGTAATGCTGTTTGTATATTTGAGCCCTTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000558507.1
ENST00000560421.5
ENST00000560891.6
CDS TCA 72 bp CGGAATAAGATATCTATCCTTGCTCAAGAGTGCATCTaGCTTGCTATACACAAACAGATTACTGTCGACGCT +
Preference number: 6 (lower is better)
Translates to: RNKISILAQECI*LAIHKQITVDA
Trigger: AGCGTCGACAGTAATCTGTTTGTGTATAGCAAGTCAGATGCACTCTTGAGCAAGGATAGATATCTTATTCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS TCA 72 bp CCAAAGTTCCTTCAGGGGAGGCAAGATTTCTTCGAATaGGCAAAGGATGAGTTCGAAGGTAGTTATAAAAAC +
Preference number: 6 (lower is better)
Translates to: PKFLQGRQDFFE*AKDEFEGSYKN
Trigger: GTTTTTATAACTACCTTCGAACTCATCCTTTGCTCATTCGAAGAAATCTTGCCTCCCCTGAAGGAACTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS TCA 72 bp TGCTTTATTTCGAAGAATAGCTGGTCCAGCTCCCACTaGAAGGTCAGTTGGATATGTGTTGATATAGTTAGG +
Preference number: 6 (lower is better)
Translates to: CFISKNSWSSSH*KVSWICVDIVR
Trigger: CCTAACTATATCAACACATATCCAACTGACCTTTCAGTGGGAGCTGGACCAGCTATTCTTCGAAATAAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
ENST00000561079.1
CDS TCA 72 bp GCCTGTCAATCTCCAAACCTTTATGTTACCTTCTGCTaGACCTGTGGTAAAATATTCCTCATAGGGATCCAA +
Preference number: 6 (lower is better)
Translates to: ACQSPNLYVTFC*TCGKIFLIGIQ
Trigger: TTGGATCCCTATGAGGAATATTTTACCACAGGTTCAGCAGAAGGTAACATAAAGGTTTGGAGATTGACAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000559769.1
ENST00000560891.6
CDS CCA 72 bp TCTTTCTATTTGATGGCGCTCATAGGAACCAATATCTaGTTTGTCTACCATTTCTTCCTGATCCAGCAGATC +
Preference number: 6 (lower is better)
Translates to: SFYLMALIGTNI*FVYHFFLIQQI
Trigger: GATCTGCTGGATCAGGAAGAAATGGTAGACAAACCAGATATTGGTTCCTATGAGCGCCATCAAATAGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CAA 72 bp ATAAGATATCTATCCTTGCTCAAGAGTGCATCTGACTaGCTATACACAAACAGATTACTGTCGACGCTGACC +
Preference number: 6 (lower is better)
Translates to: IRYLSLLKSASD*LYTNRLLSTLT
Trigger: GGTCAGCGTCGACAGTAATCTGTTTGTGTATAGCAAGTCAGATGCACTCTTGAGCAAGGATAGATATCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS CAA 72 bp GATCTAAGAAGAACCCATCTTGACTTAACTCCTTGCTaGATACTACCACCTAGTGGTAAAGTGATGACAGCT +
Preference number: 6 (lower is better)
Translates to: DLRRTHLDLTPC*ILPPSGKVMTA
Trigger: AGCTGTCATCACTTTACCACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTCAAGATGGGTTCTTCTTAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS CAA 72 bp TTCAACCTTGATGTGGCAATCTTCTGCTATGCAGTTTaGGTTGACCTGCTCCACATGTTCTTCTATAGACTA +
Preference number: 6 (lower is better)
Translates to: FNLDVAIFCYAV*VDLLHMFFYRL
Trigger: TAGTCTATAGAAGAACATGTGGAGCAGGTCAACCAAAACTGCATAGCAGAAGATTGCCACATCAAGGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558124.5
CDS CAA 90 bp AAGTCTATAGATCTAAGAAGAACCCATCTTGACTTAACTCCTTGCTaGATACTACCACCTAGTGGTAAAGTGATGACAGCTACTCCATCC +
Preference number: 6 (lower is better)
Translates to: KSIDLRRTHLDLTPC*ILPPSGKVMTATPS
Trigger: GGATGGAGTAGCTGTCATCACTTTACCACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTCAAGATGGGTTCTTCTTAGATCTATAGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS CAA 90 bp CTTTTACTATTGGCTGACTCCAGTCATACTGTGATGAAGTTACATTaGACCATTCAATGCCAGAACTTCCATTGCCATCACTCAGAGCTT +
Preference number: 6 (lower is better)
Translates to: LLLLADSSHTVMKLH*TIQCQNFHCHHSEL
Trigger: AAGCTCTGAGTGATGGCAATGGAAGTTCTGGCATTGAATGGTCAAATGTAACTTCATCACAGTATGACTGGAGTCAGCCAATAGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CAA 90 bp ATATTCGGAATAAGATATCTATCCTTGCTCAAGAGTGCATCTGACTaGCTATACACAAACAGATTACTGTCGACGCTGACCCTTGAATCA +
Preference number: 6 (lower is better)
Translates to: IFGIRYLSLLKSASD*LYTNRLLSTLTLES
Trigger: TGATTCAAGGGTCAGCGTCGACAGTAATCTGTTTGTGTATAGCAAGTCAGATGCACTCTTGAGCAAGGATAGATATCTTATTCCGAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS CAA 90 bp TACTGTGATGAAGTTACATTTGACCATTCAATGCCAGAACTTCCATaGCCATCACTCAGAGCTTTTGAATGTGAAGGTACATCATCCATC +
Preference number: 6 (lower is better)
Translates to: YCDEVTFDHSMPELP*PSLRAFECEGTSSI
Trigger: GATGGATGATGTACCTTCACATTCAAAAGCTCTGAGTGATGGCAATGGAAGTTCTGGCATTGAATGGTCAAATGTAACTTCATCACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS TCA 72 bp TCTTCCAGAATATCATCTCCTGGAGGAGCCCACAACTaGATAGAATCAGTTGCTGTCAACAATCTATTATCT +
Preference number: 6 (lower is better)
Translates to: SSRISSPGGAHN*IESVAVNNLLS
Trigger: AGATAATAGATTGTTGACAGCAACTGATTCTATTCAGTTGTGGGCTCCTCCAGGAGATGATATTCTGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560421.5
ENST00000560891.6
CDS TCA 72 bp ACTGTGGCACTGCCAACTCATATAAGGTTTAGGATTTaGTGCAGTTTGGTTAACTTGCCAGATACTCAGAAA +
Preference number: 6 (lower is better)
Translates to: TVALPTHIRFRI*CSLVNLPDTQK
Trigger: TTTCTGAGTATCTGGCAAGTTAACCAAACTGCATCAAATCCTAAACCTTATATGAGTTGGCAGTGCCACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000559059.1
ENST00000559868.1
ENST00000560891.6
CDS GCA 72 bp AGTCATACTGTGATGAAGTTACATTTGACCATTCAATaGCAGAACTTCCATTGCCATCACTCAGAGCTTTTG +
Preference number: 6 (lower is better)
Translates to: SHTVMKLHLTIQ*QNFHCHHSELL
Trigger: CAAAAGCTCTGAGTGATGGCAATGGAAGTTCTGGCATTGAATGGTCAAATGTAACTTCATCACAGTATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS GCA 72 bp GAGCAGGAGATGAATTTGGTGTTGCGTGTTCTTCAATaGTTTCTGTCCTTAGTCTTCTACGATCACTTAAAA +
Preference number: 6 (lower is better)
Translates to: EQEMNLVLRVLQ*FLSLVFYDHLK
Trigger: TTTTAAGTGATCGTAGAAGACTAAGGACAGAAAGCATTGAAGAACACGCAACACCAAATTCATCTCCTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CCA 72 bp GGGCTGCAAGCCGAAATAATTCACTGGAGGAATTTGTaGCAAGAGCATGTATCAATAAACTTAAGTAAACAG +
Preference number: 6 (lower is better)
Translates to: GLQAEIIHWRNL*QEHVSINLSKQ
Trigger: CTGTTTACTTAAGTTTATTGATACATGCTCTTGCCACAAATTCCTCCAGTGAATTATTTCGGCTTGCAGCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CCA 72 bp AAGGTCAGTTGGATATGTGTTGATATAGTTAGGGGGTaGACCTTCAAACTGATCCATTTTCTCTTGCAAGAT +
Preference number: 6 (lower is better)
Translates to: KVSWICVDIVRG*TFKLIHFLLQD
Trigger: ATCTTGCAAGAGAAAATGGATCAGTTTGAAGGTCCACCCCCTAACTATATCAACACATATCCAACTGACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
ENST00000561079.1
CDS CAA 72 bp GAGTTCAATAATGCAGCCAGGTCGAGCAGTAGACTGTaGGCTCACAATATTAAACACTTCTCCAATAAGTTT +
Preference number: 6 (lower is better)
Translates to: EFNNAARSSSRL*AHNIKHFSNKF
Trigger: AAACTTATTGGAGAAGTGTTTAATATTGTGAGCCAACAGTCTACTGCTCGACCTGGCTGCATTATTGAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CAA 72 bp TCTTGCCAGCATATTAGATTTAAAGGTCGAATGATCTaGCATTGCTGCCTCTTCTGCATTAGAACTATCAGC +
Preference number: 6 (lower is better)
Translates to: SCQHIRFKGRMI*HCCLFCIRTIS
Trigger: GCTGATAGTTCTAATGCAGAAGAGGCAGCAATGCAAGATCATTCGACCTTTAAATCTAATATGCTGGCAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS TCA 72 bp GTAAAGGCAGACTTATCAGCAAAAGTGACTGCCCACTaGTTTAAAGAACCATCTATGTGTTTAGAGATCATC +
Preference number: 6 (lower is better)
Translates to: VKADLSAKVTAH*FKEPSMCLEII
Trigger: GATGATCTCTAAACACATAGATGGTTCTTTAAATCAGTGGGCAGTCACTTTTGCTGATAAGTCTGCCTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS GCA 72 bp ATAGATCTAAGAAGAACCCATCTTGACTTAACTCCTTaGTTGATACTACCACCTAGTGGTAAAGTGATGACA +
Preference number: 6 (lower is better)
Translates to: IDLRRTHLDLTP*LILPPSGKVMT
Trigger: TGTCATCACTTTACCACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTCAAGATGGGTTCTTCTTAGATCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS GCA 72 bp TTTAAAGGTCGAATGATCTTGCATTGCTGCCTCTTCTaGATTAGAACTATCAGCTTCAGTGTCTCCAAATTT +
Preference number: 6 (lower is better)
Translates to: FKGRMILHCCLF*IRTISFSVSKF
Trigger: AAATTTGGAGACACTGAAGCTGATAGTTCTAATGCAGAAGAGGCAGCAATGCAAGATCATTCGACCTTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS GCA 72 bp CAGCATATTAGATTTAAAGGTCGAATGATCTTGCATTaGTGCCTCTTCTGCATTAGAACTATCAGCTTCAGT +
Preference number: 6 (lower is better)
Translates to: QHIRFKGRMILH*CLFCIRTISFS
Trigger: ACTGAAGCTGATAGTTCTAATGCAGAAGAGGCAGCAATGCAAGATCATTCGACCTTTAAATCTAATATGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS CCA 72 bp AGTTCAATAATGCAGCCAGGTCGAGCAGTAGACTGTTaGCTCACAATATTAAACACTTCTCCAATAAGTTTT +
Preference number: 6 (lower is better)
Translates to: SSIMQPGRAVDC*LTILNTSPISF
Trigger: AAAACTTATTGGAGAAGTGTTTAATATTGTGAGCCAACAGTCTACTGCTCGACCTGGCTGCATTATTGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CAA 72 bp ATGAGGTTAATTTTATCAACAAAGTTCTTCTCAGTTTaGAGACCTAAGGTTGCCAAAGTTCCTTCAGGGGAG +
Preference number: 6 (lower is better)
Translates to: MRLILSTKFFSV*RPKVAKVPSGE
Trigger: CTCCCCTGAAGGAACTTTGGCAACCTTAGGTCTCAAAACTGAGAAGAACTTTGTTGATAAAATTAACCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS TCA 72 bp TCTCCTTTTTACTTCATGATGATCCTGAGGTATAATTaGAGACTTCCAACCAGTCATAGGATACCACACTTT +
Preference number: 6 (lower is better)
Translates to: SPFYFMMILRYN*RLPTSHRIPHF
Trigger: AAAGTGTGGTATCCTATGACTGGTTGGAAGTCTTCAATTATACCTCAGGATCATCATGAAGTAAAAAGGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CAA 72 bp AAGATTCTGGGTCTGACAATTCATCTAATAATTTCCTaGCATCCACTACAGCTTGATAGAGTCTCAGATTTT +
Preference number: 6 (lower is better)
Translates to: KILGLTIHLIIS*HPLQLDRVSDF
Trigger: AAAATCTGAGACTCTATCAAGCTGTAGTGGATGCAAGGAAATTATTAGATGAATTGTCAGACCCAGAATCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251076.9
ENST00000449909.7
ENST00000543779.6
ENST00000560891.6
CDS CAA 72 bp GACTTACTGTCTGATCTTCATAGCTCTGTGGTATCTTaGTACTTTCTTCTGAAATTCTGTAGGATGTATCTT +
Preference number: 6 (lower is better)
Translates to: DLLSDLHSSVVS*YFLLKFCRMYL
Trigger: AAGATACATCCTACAGAATTTCAGAAGAAAGTACAAAGATACCACAGAGCTATGAAGATCAGACAGTAAGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS CAA 72 bp TTTCTCTCTTTTCAGGCTCTAAATCAATATCATCCGTaGGTATATCCTGGATTTGAAACAGCTCTGAATACT +
Preference number: 6 (lower is better)
Translates to: FLSFQALNQYHP*VYPGFETALNT
Trigger: AGTATTCAGAGCTGTTTCAAATCCAGGATATACCAACGGATGATATTGATTTAGAGCCTGAAAAGAGAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6
CDS CAA 72 bp ACTAAATGTTTGATATTCGGAATAAGATATCTATCCTaGCTCAAGAGTGCATCTGACTTGCTATACACAAAC +
Preference number: 6 (lower is better)
Translates to: TKCLIFGIRYLS*LKSASDLLYTN
Trigger: GTTTGTGTATAGCAAGTCAGATGCACTCTTGAGCAAGGATAGATATCTTATTCCGAATATCAAACATTTAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251076.9
ENST00000543779.6
ENST00000560891.6