RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DMWD (Homo sapiens)

Ensembl gene IDs: ENSG00000185800

Ensembl transcript IDs: ENST00000270223.7, ENST00000377735.7, ENST00000537879.1, ENST00000597053.1, ENST00000598237.1, ENST00000601370.1, ENST00000602469.1, ENST00000602829.1

Found 458 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTaGCTGGGCCTTGAGAGGGCCAGGCCTGAGAAACTAGGAGGCAAG +
Preference number: 1 (lower is better)
Translates to: DGSPEWKSGPPTGLG*LGLERARPEKLGGK
Trigger: CTTGCCTCCTAGTTTCTCAGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR TCA 90 bp CCAAGAGGGTCCTGCTCCAGCCGCTGGTGTGGGTCACCAGTTGTGTaGCTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCTTTTCCTGCT +
Preference number: 1 (lower is better)
Translates to: PRGSCSSRWCGSPVV*LAGPFPPWAPAFPA
Trigger: AGCAGGAAAAGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTGACCCACACCAGCGGCTGGAGCAGGACCCTCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR CCA 90 bp CAGGATGCTCTTCTCCCCAAGAGGGTCCTGCTCCAGCCGCTGGTGTaGGTCACCAGTTGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGC +
Preference number: 1 (lower is better)
Translates to: QDALLPKRVLLQPLV*VTSCVTRRSVPSLG
Trigger: GCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTGACCCACACCAGCGGCTGGAGCAGGACCCTCTTGGGGAGAAGAGCATCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR TCA 90 bp CAGAGGAAGAGGTCATTGTACTTGGCAGTGGGTGGGGGACAAGGCTaGGGCCACAAGGGCTATTACATCGCCCGTGTCCGGGCCAGTCTG +
Preference number: 1 (lower is better)
Translates to: QRKRSLYLAVGGGQG*GHKGYYIARVRASL
Trigger: CAGACTGGCCCGGACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTTGTCCCCCACCCACTGCCAAGTACAATGACCTCTTCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
3UTR TCA 90 bp CGCGGGAAGACACACTCCCTGCGGCTCCGAGAGCCAAGAGGAATCTaGGCTCTTCTTTCCAGGGTGGACGGTTCTCCAGAGTGGAAGTCG +
Preference number: 1 (lower is better)
Translates to: RGKTHSLRLREPRGI*ALLSRVDGSPEWKS
Trigger: CGACTTCCACTCTGGAGAACCGTCCACCCTGGAAAGAAGAGCTCAGATTCCTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCCCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR GCA 90 bp CTGGGCTGGGAGCAGGCCTGCACTCCTCCTCTGGGGAAAGCGGACTaGCTAGAACCACAGAGTACACACACAGGTCCTCTACATCATCTC +
Preference number: 1 (lower is better)
Translates to: LGWEQACTPPLGKAD*LEPQSTHTGPLHHL
Trigger: GAGATGATGTAGAGGACCTGTGTGTGTACTCTGTGGTTCTAGGCAGTCCGCTTTCCCCAGAGGAGGAGTGCAGGCCTGCTCCCAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR TCA 90 bp GGGACTGGAGCAGTCCATCCATCATGGTTAGTCTTGTTAATACGTTaGTCTGTGAGGTCAGCAGGGAGGGTTATGGCTAGGAGGCTGGGG +
Preference number: 1 (lower is better)
Translates to: GTGAVHPSWLVLLIR*SVRSAGRVMARRLG
Trigger: CCCCAGCCTCCTAGCCATAACCCTCCCTGCTGACCTCACAGATCAACGTATTAACAAGACTAACCATGATGGATGGACTGCTCCAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
3UTR CCA 90 bp AACACTGATGTTTCAGAGGAAGAGGTCATTGTACTTGGCAGTGGGTaGGGGACAAGGCTGAGGCCACAAGGGCTATTACATCGCCCGTGT +
Preference number: 1 (lower is better)
Translates to: NTDVSEEEVIVLGSG*GTRLRPQGLLHRPC
Trigger: ACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTTGTCCCCCACCCACTGCCAAGTACAATGACCTCTTCCTCTGAAACATCAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
3UTR CCA 90 bp CACTGCTCTAGGCTGGGAACTTGCATCTTAGCTAGCTTCCTGTCCTaGCAGTCAGCACTTTCACGCAATAATCAAAGTCCTTGGCGGATC +
Preference number: 1 (lower is better)
Translates to: HCSRLGTCILASFLS*QSALSRNNQSPWRI
Trigger: GATCCGCCAAGGACTTTGATTATTGCGTGAAAGTGCTGACTGCCAGGACAGGAAGCTAGCTAAGATGCAAGTTCCCAGCCTAGAGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537879.1
3UTR-3UTR CCA 90 bp TGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGCCGGCCTGGGGTGCCTaGGCCTTGAGAGGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: CPKAGGGKWWSQALPGQTPAWGA*ALRGPG
Trigger: GCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGG...CGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR GCA 90 bp AAGTCGGGGCCTCCAACCGGCCTGGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTTGGCTGCGGGCAGGATaGTCTTCTCCCCAAGAGGGT +
Preference number: 2 (lower is better)
Translates to: KSGPPTGLGCLGLERARPWLRAG*SSPQEG
Trigger: ACCCTCTTGGGGAGAAGAGCATCCTGCCCGCAGCCA...AGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CCA 90 bp AAGTCGGGGCCTCCAACCGGCCTGGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTTTTGATGAGGGGCCCTaGCTGCGGGCAGGATGCTCT +
Preference number: 2 (lower is better)
Translates to: KSGPPTGLGCLGLERARPFDEGP*LRAGCS
Trigger: AGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAA...AGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CCA 90 bp AAGTCGGGGCCTCCAACCGGCCTGGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTCATTGTACTTGGCAGTaGGTGGGGGACAAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: KSGPPTGLGCLGLERARPHCTWQ*VGDKAE
Trigger: CTCAGCCTTGTCCCCCACCCACTGCCAAGTACAATG...AGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CCA 90 bp CCAGGGTGGACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTTGCTATGAAAAGGGGTaGGAGGCGCTGGGCTGGGAG +
Preference number: 2 (lower is better)
Translates to: PGWTVLQSGSRGLQPAWGCYEKG*EALGWE
Trigger: CTCCCAGCCCAGCGCCTCCCACCCCTTTTCATAGCA...ACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTCCACCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CCA 90 bp CCAGGGTGGACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTTCCTGCTCCAGCCGCTaGTGTGGGTCACCAGTTGTG +
Preference number: 2 (lower is better)
Translates to: PGWTVLQSGSRGLQPAWGSCSSR*CGSPVV
Trigger: CACAACTGGTGACCCACACCAGCGGCTGGAGCAGGA...ACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTCCACCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CCA 90 bp CTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAGGCCTCCAACCGGCCTaGGGTGCCTGGGCCTTGAGA +
Preference number: 2 (lower is better)
Translates to: LNRGDLLPKGWGRKVVEPGLQPA*GAWALR
Trigger: TCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCC...TGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR CAA 90 bp TCTCCCCAAGAGGGTCCTGCTCCAGCCGCTGGTGTGGGTCACCAGTaGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCTTTTC +
Preference number: 2 (lower is better)
Translates to: SPQEGPAPAAGVGHQ*CDSQVRSLPGLRLF
Trigger: GAAAAGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTGACCCACACCAGCGGCTGGAGCAGGACCCTCTTGGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CCA 90 bp AAGTCGGGGCCTCCAACCGGCCTGGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTAGAGGTCATTGTACTTaGCAGTGGGTGGGGGACAAG +
Preference number: 2 (lower is better)
Translates to: KSGPPTGLGCLGLERARPRGHCT*QWVGDK
Trigger: CTTGTCCCCCACCCACTGCCAAGTACAATGACCTCT...AGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR TCA 90 bp AAGGCTGAGGCCACAAGGGCTATTACATCGCCCGTGTCCGGGCCAGTCTGGGGGGGTGGGGGACAAGGCTaGGGCCACAAGGGCTATTAC +
Preference number: 2 (lower is better)
Translates to: KAEATRAITSPVSGPVWGGGGQG*GHKGYY
Trigger: GTAATAGCCCTTGTGGCCTCAGCCTTGTCCCCCACC...CCCCCAGACTGGCCCGGACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
3UTR-3UTR CCA 90 bp CCAGGGTGGACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTCATTGTACTTGGCAGTaGGTGGGGGACAAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: PGWTVLQSGSRGLQPAWGHCTWQ*VGDKAE
Trigger: CTCAGCCTTGTCCCCCACCCACTGCCAAGTACAATG...ACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTCCACCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CCA 90 bp GGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTGGGAGGCGCTGGGCTaGGAGCAGGCCTGCACTCCT +
Preference number: 2 (lower is better)
Translates to: GKWWSQALPGQTRPQNSSWEALG*EQACTP
Trigger: AGGAGTGCAGGCCTGCTCCCAGCCCAGCGCCTCCCA...GGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR TCA 90 bp TGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGCGGCTTTTCCTGCTATaGAAAGGGGTGGGAGGCGCT +
Preference number: 2 (lower is better)
Translates to: CPKAGGGKWWSQALPGQTRLFLL*KGVGGA
Trigger: AGCGCCTCCCACCCCTTTTCATAGCAGGAAAAGCCG...CGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR GCA 90 bp ATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCTTGGATGCCCCAATTCCCTTTCTGCTGCCTGCTaGCTAGGGCTAGACCCCCTC +
Preference number: 2 (lower is better)
Translates to: MWGPSAALQTASLGCPNSLSAAC*LGLDPL
Trigger: GAGGGGGTCTAGCCCTAGGCAGCAGGCAGCAGAAAG...GGAATTGGGGCATCCAAGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602829.1
3UTR-3UTR GCA 90 bp AAGACCTGGCCATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCTTGGATACCCACCCCTCTTTCTaGTGCCTGCTGCCTAGGGCT +
Preference number: 2 (lower is better)
Translates to: KTWPCGAHLLPFRRPALDTHPSF*CLLPRA
Trigger: AGCCCTAGGCAGCAGGCAGCAGAAAGAGGGGTGGGT...ATCCAAGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATGGCCAGGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602829.1
3UTR-3UTR CCA 90 bp CACCAGTTGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCTTTTCCTGCAGCAGGGAGGGTTATaGCTAGGAGGCTGGGGGCAT +
Preference number: 2 (lower is better)
Translates to: HQLCDSQVRSLPGLRLFLQQGGL*LGGWGH
Trigger: ATGCCCCCAGCCTCCTAGCCATAACCCTCCCTGCTG...CAGGAAAAGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CCA 90 bp CAGAGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGTGCTATGAAAAGGGGTaGGAGGCGCTGGGCTGGGAG +
Preference number: 2 (lower is better)
Translates to: QSLNRGDLLPKGWGRKVVCYEKG*EALGWE
Trigger: CTCCCAGCCCAGCGCCTCCCACCCCTTTTCATAGCA...CACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CCA 90 bp CAGAGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGACGGTTCTCCAGAGTaGAAGTCGGGGCCTCCAACC +
Preference number: 2 (lower is better)
Translates to: QSLNRGDLLPKGWGRKVVDGSPE*KSGPPT
Trigger: GGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTC...CACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR GCA 90 bp ATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCTTGGATGCCCCAATTCCCACCCCTCTTTCTGCTaGCTGCTGCCTAGGGCTAGA +
Preference number: 2 (lower is better)
Translates to: MWGPSAALQTASLGCPNSHPSFC*LLPRAR
Trigger: TCTAGCCCTAGGCAGCAGGCAGCAGAAAGAGGGGTG...GGAATTGGGGCATCCAAGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602829.1
3UTR-3UTR CCA 90 bp AAGGCTGAGGCCACAAGGGCTATTACATCGCCCGTGTCCGGGCCAGTCTGGGGGCATTGTACTTGGCAGTaGGTGGGGGACAAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: KAEATRAITSPVSGPVWGHCTWQ*VGDKAE
Trigger: CTCAGCCTTGTCCCCCACCCACTGCCAAGTACAATG...CCCCCAGACTGGCCCGGACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
3UTR-3UTR CCA 90 bp AAGGCTGAGGCCACAAGGGCTATTACATCGCCCGTGTCCGGGCCAGTCTGGGGGGCTAGCTTCCTGTCCTaGCAGTCAGCACTTTCACGC +
Preference number: 2 (lower is better)
Translates to: KAEATRAITSPVSGPVWGASFLS*QSALSR
Trigger: GCGTGAAAGTGCTGACTGCCAGGACAGGAAGCTAGC...CCCCCAGACTGGCCCGGACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000537879.1
3UTR-3UTR TCA 90 bp GGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCGGTGGGGGACAAGGCTaGGGCCACAAGGGCTATTAC +
Preference number: 2 (lower is better)
Translates to: GKWWSQALPGQTRPQNSSGGGQG*GHKGYY
Trigger: GTAATAGCCCTTGTGGCCTCAGCCTTGTCCCCCACC...GGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR GCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGCTGGGGAAAGCGGACTaGCTAGAACCACAGAGTACA +
Preference number: 2 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKLGKAD*LEPQST
Trigger: TGTACTCTGTGGTTCTAGGCAGTCCGCTTTCCCCAG...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR GCA 90 bp AGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTTGGTGGCTGCGGGCAGGATaGTCTTCTCCCCAAGAGGGT +
Preference number: 2 (lower is better)
Translates to: SGGAKPSLGKRDPKIAPWWLRAG*SSPQEG
Trigger: ACCCTCTTGGGGAGAAGAGCATCCTGCCCGCAGCCA...CCAAGGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR GCA 90 bp GGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCGGAAGACACACTCCCTaGGGCTCCGAGAGCCAAGAG +
Preference number: 2 (lower is better)
Translates to: GKWWSQALPGQTRPQNSSGRHTP*GSESQE
Trigger: CTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCC...GGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CCA 90 bp AGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTTGGCAGCAGGGAGGGTTATaGCTAGGAGGCTGGGGGCAT +
Preference number: 2 (lower is better)
Translates to: SGGAKPSLGKRDPKIAPWQQGGL*LGGWGH
Trigger: ATGCCCCCAGCCTCCTAGCCATAACCCTCCCTGCTG...CCAAGGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CCA 90 bp GGCGCGGGAAGACACACTCCCTGCGGCTCCGAGAGCCAAGAGGAATCTGAGCTCCAAATTTTGTGCAGGTaGGGGGACTGGAGCAGTCCA +
Preference number: 2 (lower is better)
Translates to: GAGRHTPCGSESQEESELQILCR*GDWSSP
Trigger: TGGACTGCTCCAGTCCCCCCACCTGCACAAAATTTG...GAGCTCAGATTCCTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCCCGCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CCA 90 bp CAGAGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGAGGGCCTGGGAAACGTaGTCCTGGGCAGTTCTGATA +
Preference number: 2 (lower is better)
Translates to: QSLNRGDLLPKGWGRKVVRAWET*SWAVLI
Trigger: TATCAGAACTGCCCAGGACCACGTTTCCCAGGCCCT...CACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CCA 90 bp CTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAAGAGGTCATTGTACTTaGCAGTGGGTGGGGGACAAG +
Preference number: 2 (lower is better)
Translates to: LNRGDLLPKGWGRKVVEPRGHCT*QWVGDK
Trigger: CTTGTCCCCCACCCACTGCCAAGTACAATGACCTCT...TGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CCA 90 bp CAGAGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGCTCTTCTTTCCAGGGTaGACGGTTCTCCAGAGTGGA +
Preference number: 2 (lower is better)
Translates to: QSLNRGDLLPKGWGRKVVLFFPG*TVLQSG
Trigger: TCCACTCTGGAGAACCGTCCACCCTGGAAAGAAGAG...CACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR TCA 90 bp AAGGCTGAGGCCACAAGGGCTATTACATCGCCCGTGTCCGGGCCAGTCTGGGGGGTCTTGTTAATACGTTaGTCTGTGAGGTCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: KAEATRAITSPVSGPVWGVLLIR*SVRSAG
Trigger: CCCTGCTGACCTCACAGATCAACGTATTAACAAGAC...CCCCCAGACTGGCCCGGACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
3UTR-3UTR CCA 90 bp GGCCCGATATCCATGGCTTCACACCACTGTGCCACTCGGGGAGTTGCCTGGTTGAGAGGTCATTGTACTTaGCAGTGGGTGGGGGACAAG +
Preference number: 2 (lower is better)
Translates to: GPISMASHHCATRGVAWLRGHCT*QWVGDK
Trigger: CTTGTCCCCCACCCACTGCCAAGTACAATGACCTCT...CAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCCATGGATATCGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537879.1
3UTR-3UTR CCA 90 bp GGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCAGGGCCTGGGAAACGTaGTCCTGGGCAGTTCTGATA +
Preference number: 2 (lower is better)
Translates to: GKWWSQALPGQTRPQNSSRAWET*SWAVLI
Trigger: TATCAGAACTGCCCAGGACCACGTTTCCCAGGCCCT...GGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR TCA 90 bp CTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAGTCTTGTTAATACGTTaGTCTGTGAGGTCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: LNRGDLLPKGWGRKVVEPVLLIR*SVRSAG
Trigger: CCCTGCTGACCTCACAGATCAACGTATTAACAAGAC...TGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR TCA 90 bp AGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGGTCTTGTTAATACGTTaGTCTGTGAGGTCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: SLNRGDLLPKGWGRKVVEVLLIR*SVRSAG
Trigger: CCCTGCTGACCTCACAGATCAACGTATTAACAAGAC...CTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR TCA 90 bp GCTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACCCTGCCCACTCAACTaGGGGGCACACTGCAGACCT +
Preference number: 2 (lower is better)
Translates to: AGDRDEGNTDVSEEEVIVPCPLN*GAHCRP
Trigger: AGGTCTGCAGTGTGCCCCTCAGTTGAGTGGGCAGGG...TACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR TCA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACCCCTGCCCACTCAACTaGGGGGCACACTGCAGACCT +
Preference number: 2 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYPCPLN*GAHCRP
Trigger: AGGTCTGCAGTGTGCCCCTCAGTTGAGTGGGCAGGG...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR GCA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACCAGAGTCCCCAAAGCTaGTGCCACCCTGGCCTTGCC +
Preference number: 2 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYQSPQS*CHPGLA
Trigger: GGCAAGGCCAGGGTGGCAGCAGCTTTGGGGACTCTG...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537879.1
3UTR-3UTR GCA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACTGCCACTCGGGGAGTTaGCTGGTTGGGAGGAGATGC +
Preference number: 2 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYCHSGS*LVGRRC
Trigger: GCATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCA...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537879.1
3UTR-3UTR CCA 90 bp TGGCTTCACACCACTGTGCCACTCGGGGAGTTGCCTGGTTGGGAGGAGATGCCCGCAGTCCATCCATCATaGTTAGTCTTGTTAATACGT +
Preference number: 2 (lower is better)
Translates to: WLHTTVPLGELPGWEEMPAVHPS*LVLLIR
Trigger: ACGTATTAACAAGACTAACCATGATGGATGGACTGC...GGGCATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537879.1
3UTR-3UTR CCA 90 bp AGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTTGGGCAGTCCATCCATCATaGTTAGTCTTGTTAATACGT +
Preference number: 2 (lower is better)
Translates to: SGGAKPSLGKRDPKIAPWAVHPS*LVLLIR
Trigger: ACGTATTAACAAGACTAACCATGATGGATGGACTGC...CCAAGGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CCA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACGCAGTCCATCCATCATaGTTAGTCTTGTTAATACGT +
Preference number: 2 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYAVHPS*LVLLIR
Trigger: ACGTATTAACAAGACTAACCATGATGGATGGACTGC...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
3UTR CCA 72 bp GTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTaGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTGAGA +
Preference number: 3 (lower is better)
Translates to: VLQSGSRGLQPA*GAWALRGPGLR
Trigger: TCTCAGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR TCA 72 bp TCCTGCTCCAGCCGCTGGTGTGGGTCACCAGTTGTGTaGCTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCT +
Preference number: 3 (lower is better)
Translates to: SCSSRWCGSPVV*LAGPFPPWAPA
Trigger: AGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTGACCCACACCAGCGGCTGGAGCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR GCA 72 bp GAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATaGTCTTCTCCCCAAGAGGGTCCTGCTCCAGCCGCT +
Preference number: 3 (lower is better)
Translates to: EDFDEGPWLRAG*SSPQEGPAPAA
Trigger: AGCGGCTGGAGCAGGACCCTCTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR CCA 72 bp CAGAGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTaGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGG +
Preference number: 3 (lower is better)
Translates to: QSLNRGDLLPKG*GRKVVEPSPPW
Trigger: CCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR CCA 72 bp CTTCTCCCCAAGAGGGTCCTGCTCCAGCCGCTGGTGTaGGTCACCAGTTGTGTGACTCGCAGGTCCGTTCCC +
Preference number: 3 (lower is better)
Translates to: LLPKRVLLQPLV*VTSCVTRRSVP
Trigger: GGGAACGGACCTGCGAGTCACACAACTGGTGACCCACACCAGCGGCTGGAGCAGGACCCTCTTGGGGAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR CCA 72 bp GTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCTTaGATGCCCCAATTCCTAGCTGGCTCTCACACCCAC +
Preference number: 3 (lower is better)
Translates to: VGPICCPSDGQP*MPQFLAGSHTH
Trigger: GTGGGTGTGAGAGCCAGCTAGGAATTGGGGCATCCAAGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602829.1
3UTR-3UTR CAA 90 bp GCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAAAACACCGAGGACTTaGATGAGGGGCCCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: AGGGKWWSQALPGQTRPQKTPRT*MRGPGC
Trigger: GCAGCCAGGGCCCCTCATCAAAGTCCTCGGTGTTTT...TTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR GCA 72 bp CAGGCAGTAAGACCTGGCCATGTGGGGCCCATCTGCTaGCCTTCAGACGGCCAGCCTTGGATGCCCCAATTC +
Preference number: 3 (lower is better)
Translates to: QAVRPGHVGPIC*PSDGQPWMPQF
Trigger: GAATTGGGGCATCCAAGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATGGCCAGGTCTTACTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602829.1
3UTR CCA 72 bp GATGAGAGGGAGAGATGGGAGGGGTTAGAGACCACCTaGGCTTCAGCCAGTGTCAAGGGGAGGGAGCCAGCC +
Preference number: 3 (lower is better)
Translates to: DERERWEGLETT*ASASVKGREPA
Trigger: GGCTGGCTCCCTCCCCTTGACACTGGCTGAAGCCCAGGTGGTCTCTAACCCCTCCCATCTCTCCCTCTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537879.1
3UTR-3UTR CAA 90 bp GCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAAGAGGTCATTGTACTaGGCAGTGGGTGGGGGACAA +
Preference number: 3 (lower is better)
Translates to: AGGGKWWSQALPGQTRPQKRSLY*AVGGGQ
Trigger: TTGTCCCCCACCCACTGCCAAGTACAATGACCTCTT...TTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CAA 90 bp CACCAGTTGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCTTTTCCTGCAGAGGAAGAGGTCATaGTACTTGGCAGTGGGTGGG +
Preference number: 3 (lower is better)
Translates to: HQLCDSQVRSLPGLRLFLQRKRS*YLAVGG
Trigger: CCCACCCACTGCCAAGTACAATGACCTCTTCCTCTG...CAGGAAAAGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CAA 90 bp CTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAAAGAGGTCATTGTACTaGGCAGTGGGTGGGGGACAA +
Preference number: 3 (lower is better)
Translates to: LNRGDLLPKGWGRKVVEPKRSLY*AVGGGQ
Trigger: TTGTCCCCCACCCACTGCCAAGTACAATGACCTCTT...TGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR TCA 72 bp ACACACTCCCTGCGGCTCCGAGAGCCAAGAGGAATCTaGGCTCTTCTTTCCAGGGTGGACGGTTCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: THSLRLREPRGI*ALLSRVDGSPE
Trigger: CTCTGGAGAACCGTCCACCCTGGAAAGAAGAGCTCAGATTCCTCTTGGCTCTCGGAGCCGCAGGGAGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR GCA 72 bp GAGCAGGCCTGCACTCCTCCTCTGGGGAAAGCGGACTaGCTAGAACCACAGAGTACACACACAGGTCCTCTA +
Preference number: 3 (lower is better)
Translates to: EQACTPPLGKAD*LEPQSTHTGPL
Trigger: TAGAGGACCTGTGTGTGTACTCTGTGGTTCTAGGCAGTCCGCTTTCCCCAGAGGAGGAGTGCAGGCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CAA 90 bp TACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACAGACCCGCTGAGACAGAGGAAGAGGTCATaGTACTTGGCAGTGGGTGGG +
Preference number: 3 (lower is better)
Translates to: YTHRSSTSSPPKGTDPLRQRKRS*YLAVGG
Trigger: CCCACCCACTGCCAAGTACAATGACCTCTTCCTCTG...TCTCAGCGGGTCTGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR TCA 72 bp CACTTTCACGCAATAATCAAAGTCCTTGGCGGATCCTaGGTGAGACCATGGGGTAAGGGTAAGGGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: HFHAIIKVLGGS*VRPWGKGKGGR
Trigger: CCTCCCACCCTTACCCTTACCCCATGGTCTCACTCAGGATCCGCCAAGGACTTTGATTATTGCGTGAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537879.1
3UTR CCA 72 bp GTTTCAGAGGAAGAGGTCATTGTACTTGGCAGTGGGTaGGGGACAAGGCTGAGGCCACAAGGGCTATTACAT +
Preference number: 3 (lower is better)
Translates to: VSEEEVIVLGSG*GTRLRPQGLLH
Trigger: ATGTAATAGCCCTTGTGGCCTCAGCCTTGTCCCCCACCCACTGCCAAGTACAATGACCTCTTCCTCTGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
3UTR-3UTR CAA 90 bp TACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACAGACCCGCTGAGAAGTCTTGTTAATACGTaGATCTGTGAGGTCAGCAGG +
Preference number: 3 (lower is better)
Translates to: YTHRSSTSSPPKGTDPLRSLVNT*ICEVSR
Trigger: CCTGCTGACCTCACAGATCAACGTATTAACAAGACT...TCTCAGCGGGTCTGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR-3UTR CAA 90 bp AGAACCACAGAGTACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACAAGTCTTGTTAATACGTaGATCTGTGAGGTCAGCAGG +
Preference number: 3 (lower is better)
Translates to: RTTEYTHRSSTSSPPKGTSLVNT*ICEVSR
Trigger: CCTGCTGACCTCACAGATCAACGTATTAACAAGACT...TGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTACTCTGTGGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR TCA 72 bp GCAGTCCATCCATCATGGTTAGTCTTGTTAATACGTTaGTCTGTGAGGTCAGCAGGGAGGGTTATGGCTAGG +
Preference number: 3 (lower is better)
Translates to: AVHPSWLVLLIR*SVRSAGRVMAR
Trigger: CCTAGCCATAACCCTCCCTGCTGACCTCACAGATCAACGTATTAACAAGACTAACCATGATGGATGGACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
3UTR-3UTR CAA 90 bp GCTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTAAGTCTTGTTAATACGTaGATCTGTGAGGTCAGCAGG +
Preference number: 3 (lower is better)
Translates to: AGDRDEGNTDVSEEEVIVSLVNT*ICEVSR
Trigger: CCTGCTGACCTCACAGATCAACGTATTAACAAGACT...TACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
CDS-3UTR GCA 90 bp AAGTCGGGGCCTCCAACCGGCCTGGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTTGGTGTGCCAGGCTCTaGCGCCACACCCGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: KSGPPTGLGCLGLERARPWCARL*RHTRAA
Trigger: GGCGGCCCGGGTGTGGCGGCAGAGCCTGGCACACCA...AGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp AAGTCGGGGCCTCCAACCGGCCTGGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTGCTCACGGCCCAAGTTaGAGCAGACGCGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: KSGPPTGLGCLGLERARPAHGPS*SRRGLP
Trigger: GGGGAGACCGCGTCTGCTTCAACTTGGGCCGTGAGC...AGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp AAGTCGGGGCCTCCAACCGGCCTGGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTCAGGACTTGTGGCCATaGCCTCGAGCCACCACGCGG +
Preference number: 4 (lower is better)
Translates to: KSGPPTGLGCLGLERARPQDLWP*PRATTR
Trigger: CCGCGTGGTGGCTCGAGGCCATGGCCACAAGTCCTG...AGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp AAGTCGGGGCCTCCAACCGGCCTGGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTCTTGCCCCCGCCAGCTaGGTGCGGGAGACTGTTGGA +
Preference number: 4 (lower is better)
Translates to: KSGPPTGLGCLGLERARPLAPAS*VRETVG
Trigger: TCCAACAGTCTCCCGCACCCAGCTGGCGGGGGCAAG...AGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp CCAGGGTGGACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTCGGTCCCGCCGCTCCTaGAGTGTGAGCGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: PGWTVLQSGSRGLQPAWGRSRRS*SVSVAK
Trigger: CTTCGCCACGCTCACACTGCAGGAGCGGCGGGACCG...ACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTCCACCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp ACCTGGCCATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCTTGGATGCCGCGGGCACAGCGCAGTaGCCAGCACCTTGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: TWPCGAHLLPFRRPALDAAGTAQ*PAPWRG
Trigger: ACCCCGCCAAGGTGCTGGGCACTGCGCTGTGCCCGC...GGCATCCAAGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATGGCCAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR GCA 90 bp ACCTGGCCATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCTTGGATGCCGGGGCACCTCGTGGATaGGCGGGCACAGCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: TWPCGAHLLPFRRPALDAGAPRG*AGTAQC
Trigger: GCACTGCGCTGTGCCCGCGCATCCACGAGGTGCCCC...GGCATCCAAGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATGGCCAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR GCA 90 bp GGCGCGGGAAGACACACTCCCTGCGGCTCCGAGAGCCAAGAGGAATCTGAGCTCAGGAGATGCCCGCCTTaGCCGGCCGGGCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GAGRHTPCGSESQEESELRRCPP*PAGPRC
Trigger: GCACCTGGGCCCGGCCGGGCAAGGCGGGCATCTCCT...GAGCTCAGATTCCTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCCCGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377735.7
CDS-3UTR CCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGGGCGGCACCGGAGTCTaGGCGGAAGCCGGACCCGAC +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKGGTGV*AEAGPD
Trigger: GTCGGGTCCGGCTTCCGCCCAGACTCCGGTGCCGCC...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp AAGTCGGGGCCTCCAACCGGCCTGGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTGCCGAGGCGCAGGGGTaGCTGACGTTGTACAGGTAC +
Preference number: 4 (lower is better)
Translates to: KSGPPTGLGCLGLERARPAEAQG*LTLYRY
Trigger: GTACCTGTACAACGTCAGCCACCCCTGCGCCTCGGC...AGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CCAGGGTGGACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTTTCAGCAGGCTGTACTaGGGCGGGGCCGAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: PGWTVLQSGSRGLQPAWGFSRLY*GGAEAQ
Trigger: CTGCGCCTCGGCCCCGCCCCAGTACAGCCTGCTGAA...ACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTCCACCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGGCCAGCCTTGGGCAGTaGAGAGAGCGGGGCGCCCCC +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKASLGQ*RERGAP
Trigger: GGGGGCGCCCCGCTCTCTCCACTGCCCAAGGCTGGC...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp GGCGCGGGAAGACACACTCCCTGCGGCTCCGAGAGCCAAGAGGAATCTGAGCTCGCGTGGTGCCAGGTGTaGCAGGGAGGGTGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: GAGRHTPCGSESQEESELAWCQV*QGGCGC
Trigger: GCACCCGCACCCTCCCTGGCACACCTGGCACCACGC...GAGCTCAGATTCCTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCCCGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp TGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGGCGTGGTGCCAGGTGTaGCAGGGAGGGTGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: CPKAGGGKWWSQALPGQTAWCQV*QGGCGC
Trigger: GCACCCGCACCCTCCCTGGCACACCTGGCACCACGC...CGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp AGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGTGGTGTGCCAGGCTCTaGCGCCACACCCGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SLNRGDLLPKGWGRKVVEWCARL*RHTRAA
Trigger: GGCGGCCCGGGTGTGGCGGCAGAGCCTGGCACACCA...CTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp GCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAGCGGGCACAGCGCAGTaGCCAGCACCTTGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: AGGGKWWSQALPGQTRPQAGTAQ*PAPWRG
Trigger: ACCCCGCCAAGGTGCTGGGCACTGCGCTGTGCCCGC...TTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGGCGGGCACAGCGCAGTaGCCAGCACCTTGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKAGTAQ*PAPWRG
Trigger: ACCCCGCCAAGGTGCTGGGCACTGCGCTGTGCCCGC...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAGGCGGCACCGGAGTCTaGGCGGAAGCCGGACCCGAC +
Preference number: 4 (lower is better)
Translates to: LNRGDLLPKGWGRKVVEPGGTGV*AEAGPD
Trigger: GTCGGGTCCGGCTTCCGCCCAGACTCCGGTGCCGCC...TGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGCACCCACCGCCCACTTaGCCAGCGGGTTGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKHPPPT*PAGCGV
Trigger: CACCCCGCAACCCGCTGGCCAAGTGGGCGGTGGGTG...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CCAGGGTGGACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTCAGGACTTGTGGCCATaGCCTCGAGCCACCACGCGG +
Preference number: 4 (lower is better)
Translates to: PGWTVLQSGSRGLQPAWGQDLWP*PRATTR
Trigger: CCGCGTGGTGGCTCGAGGCCATGGCCACAAGTCCTG...ACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTCCACCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp AGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGGCCAGCCTTGGGCAGTaGAGAGAGCGGGGCGCCCCC +
Preference number: 4 (lower is better)
Translates to: SLNRGDLLPKGWGRKVVEASLGQ*RERGAP
Trigger: GGGGGCGCCCCGCTCTCTCCACTGCCCAAGGCTGGC...CTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CCAGGGTGGACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTGGTGCGGGAGACTGTTaGAGCGGGACAGCGAGCGAG +
Preference number: 4 (lower is better)
Translates to: PGWTVLQSGSRGLQPAWGGAGDC*SGTASE
Trigger: CTCGCTCGCTGTCCCGCTCCAACAGTCTCCCGCACC...ACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTCCACCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp AAGTCGGGGCCTCCAACCGGCCTGGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTTGCTATGAAAAGGGGTaGGAGGCGCTGGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: KSGPPTGLGCLGLERARPCYEKG*EALGWE
Trigger: CTCCCAGCCCAGCGCCTCCCACCCCTTTTCATAGCA...AGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp AAGTCGGGGCCTCCAACCGGCCTGGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTGACGGTTCTCCAGAGTaGAAGTCGGGGCCTCCAACC +
Preference number: 4 (lower is better)
Translates to: KSGPPTGLGCLGLERARPDGSPE*KSGPPT
Trigger: GGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTC...AGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp TGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGCCCATCAGCACCGGCTaGTGTCGCCGCCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CPKAGGGKWWSQALPGQTPISTG*CRRLLC
Trigger: GCAGAGGAGGCGGCGACAGCAGCCGGTGCTGATGGG...CGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp GACCTGGCCATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCTTGGATGCGCTTCTCCCCACCACTaGCACTGCCGCCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: DLAMWGPSAALQTASLGCASPHH*HCRHCH
Trigger: GTGGCAGTGGCGGCAGTGGCAGTGGTGGGGAGAAGC...GCATCCAAGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATGGCCAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR CCA 90 bp AAGTCGGGGCCTCCAACCGGCCTGGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTCCTCCTCTGCCCTTGTaGTGTAGGGGTCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: KSGPPTGLGCLGLERARPPPLPL*CRGQRP
Trigger: TGGCCTTTGACCCCTACACCACAAGGGCAGAGGAGG...AGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CAGAGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGCAGTGCCCAGCACCTTaGCGGGGTCCAGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: QSLNRGDLLPKGWGRKVVQCPAP*RGPGGC
Trigger: GCAGCCGCCTGGACCCCGCCAAGGTGCTGGGCACTG...CACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp ACAGGCAGTAAGACCTGGCCATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCACAGTGCCCAGCACCTTaGCGGGGTCCAGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: TGSKTWPCGAHLLPFRRPQCPAP*RGPGGC
Trigger: GCAGCCGCCTGGACCCCGCCAAGGTGCTGGGCACTG...TGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATGGCCAGGTCTTACTGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR CCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGAGCAGGGGCACCTCGTaGATGCGCGGGCACAGCGCA +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKSRGTS*MRGHSA
Trigger: TGCGCTGTGCCCGCGCATCCACGAGGTGCCCCTGCT...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CCAGGGTGGACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTGCTGGGGGAGGAAAGTaGTGGAGCCAAGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PGWTVLQSGSRGLQPAWGAGGGK*WSQALP
Trigger: AGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGC...ACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTCCACCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp ACAGGCAGTAAGACCTGGCCATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAAGGTCCCCGGCAGGCTaGTGTGGGGCCACTCACCGC +
Preference number: 4 (lower is better)
Translates to: TGSKTWPCGAHLLPFRRPRSPAG*CGATHR
Trigger: GCGGTGAGTGGCCCCACACCAGCCTGCCGGGGACCT...TGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATGGCCAGGTCTTACTGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602829.1
3UTR CAA 72 bp GAGGGTCCTGCTCCAGCCGCTGGTGTGGGTCACCAGTaGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: EGPAPAAGVGHQ*CDSQVRSLPGL
Trigger: GAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTGACCCACACCAGCGGCTGGAGCAGGACCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp AGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGGCCGCTCCTGCAGTGTaGGCGTGGCGAAGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: SLNRGDLLPKGWGRKVVEAAPAV*AWRSGQ
Trigger: TTGGCCGCTTCGCCACGCTCACACTGCAGGAGCGGC...CTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp CTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAGCCGCTCCTGCAGTGTaGGCGTGGCGAAGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: LNRGDLLPKGWGRKVVEPAAPAV*AWRSGQ
Trigger: TTGGCCGCTTCGCCACGCTCACACTGCAGGAGCGGC...TGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp GCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAGGCACCCTCAGAGCCTaGACAGGGGTGACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AGGGKWWSQALPGQTRPQGTLRA*TGVTCC
Trigger: GCAGCAGGTCACCCCTGTTCAGGCTCTGAGGGTGCC...TTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp CCAGGGTGGACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTGAGAAGCCCTCGCCCTaGTTCAGCAGGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: PGWTVLQSGSRGLQPAWGEKPSP*FSRLYW
Trigger: CCAGTACAGCCTGCTGAAGCAGGGCGAGGGCTTCTC...ACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTCCACCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp CCAGGGTGGACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTCAGCGGGTTGCGGGGTaGCTTGCTCTTGGCAGCATA +
Preference number: 4 (lower is better)
Translates to: PGWTVLQSGSRGLQPAWGQRVAG*LALGSI
Trigger: TATGCTGCCAAGAGCAAGGCACCCCGCAACCCGCTG...ACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTCCACCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp AAGGCTGAGGCCACAAGGGCTATTACATCGCCCGTGTCCGGGCCAGTCTGGGGGCTCACACAGGCCAGGTaGCGGCCATCGGGCGAGAAG +
Preference number: 4 (lower is better)
Translates to: KAEATRAITSPVSGPVWGLTQAR*RPSGEK
Trigger: CTTCTCGCCCGATGGCCGGCACCTGGCCTGTGTGAG...CCCCCAGACTGGCCCGGACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp GCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAATCCCACAGGCAGAACTaGGTGTCCTGGCCCGCCGAG +
Preference number: 4 (lower is better)
Translates to: AGGGKWWSQALPGQTRPQSHRQN*VSWPAE
Trigger: CTCGGCGGGCCAGGACACGCAGTTCTGCCTGTGGGA...TTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGGCTTCTCCCCACCACTaGCACTGCCGCCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKASPHH*HCRHCH
Trigger: GTGGCAGTGGCGGCAGTGGCAGTGGTGGGGAGAAGC...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CACCAGTTGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCTTTTCCTGTTCAGCAGGCTGTACTaGGGCGGGGCCGAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: HQLCDSQVRSLPGLRLFLFSRLY*GGAEAQ
Trigger: CTGCGCCTCGGCCCCGCCCCAGTACAGCCTGCTGAA...CAGGAAAAGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp GGCGCGGGAAGACACACTCCCTGCGGCTCCGAGAGCCAAGAGGAATCTGAGCTCCGCAGGCAGCCATCCTaGCTCACACAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GAGRHTPCGSESQEESELRRQPS*LTQARC
Trigger: GCACCTGGCCTGTGTGAGCCAGGATGGCTGCCTGCG...GAGCTCAGATTCCTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCCCGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGGGTGCGGGAGACTGTTaGAGCGGGACAGCGAGCGAG +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKGAGDC*SGTASE
Trigger: CTCGCTCGCTGTCCCGCTCCAACAGTCTCCCGCACC...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCTTGGATGCCCCAATTCAGCAGGGGCACCTCGTaGATGCGCGGGCACAGCGCA +
Preference number: 4 (lower is better)
Translates to: HVGPICCPSDGQPWMPQFSRGTS*MRGHSA
Trigger: TGCGCTGTGCCCGCGCATCCACGAGGTGCCCCTGCT...GAATTGGGGCATCCAAGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR CCA 90 bp AAGTCGGGGCCTCCAACCGGCCTGGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTACTGTGAGCCGCTCCTaGGCGATCTTCTTGCACACA +
Preference number: 4 (lower is better)
Translates to: KSGPPTGLGCLGLERARPTVSRS*AIFLHT
Trigger: TGTGTGCAAGAAGATCGCCCAGGAGCGGCTCACAGT...AGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp AAGTCGGGGCCTCCAACCGGCCTGGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTAGGGCCTGGGAAACGTaGTCCTGGGCAGTTCTGATA +
Preference number: 4 (lower is better)
Translates to: KSGPPTGLGCLGLERARPRAWET*SWAVLI
Trigger: TATCAGAACTGCCCAGGACCACGTTTCCCAGGCCCT...AGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGCAGCTGGGCAGGGCCTaGGAAACGTGGTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKQLGRA*ETWSWA
Trigger: TGCCCAGGACCACGTTTCCCAGGCCCTGCCCAGCTG...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CACCAGTTGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCTTTTCCTGGGCCTCCAACCGGCCTaGGGTGCCTGGGCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: HQLCDSQVRSLPGLRLFLGLQPA*GAWALR
Trigger: TCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCC...CAGGAAAAGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp GGCCAGCCTTGGATGCCCCAATTCCTAGCTGGCTCTCACACCCACCCCTCTTTCCCCGGCAGGCTGGTGTaGGGCCACTCACCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GQPWMPQFLAGSHTHPSFPGRLV*GHSPPC
Trigger: GCAAGGCGGTGAGTGGCCCCACACCAGCCTGCCGGG...GAAAGAGGGGTGGGTGTGAGAGCCAGCTAGGAATTGGGGCATCCAAGGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR TCA 90 bp GCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAGTGGCCACTGGCGTGTaGTGCCAGGAACAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: AGGGKWWSQALPGQTRPQVATGV*CQEQAL
Trigger: GAGAGCCTGTTCCTGGCATCACACGCCAGTGGCCAC...TTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp GGCGCGGGAAGACACACTCCCTGCGGCTCCGAGAGCCAAGAGGAATCTGAGCTCGTGGCCACTGGCGTGTaGTGCCAGGAACAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GAGRHTPCGSESQEESELVATGV*CQEQAL
Trigger: GAGAGCCTGTTCCTGGCATCACACGCCAGTGGCCAC...GAGCTCAGATTCCTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCCCGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp CCAGGGTGGACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTCAAAGGCCACAGCGTTaGCCCAGGACTTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: PGWTVLQSGSRGLQPAWGQRPQR*PRTCGH
Trigger: ATGGCCACAAGTCCTGGGTCAACGCTGTGGCCTTTG...ACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTCCACCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp CACCAGTTGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCTTTTCCTGCACTGCCACCCCGGCTaGTGTTGCCCAGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: HQLCDSQVRSLPGLRLFLHCHPG*CCPGCG
Trigger: ACCACAGCCTGGGCAACATCAGCCGGGGTGGCAGTG...CAGGAAAAGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp GCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAACCCTGCCCACTCAACTaGGGGGCACACTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: AGGGKWWSQALPGQTRPQPCPLN*GAHCRP
Trigger: AGGTCTGCAGTGTGCCCCTCAGTTGAGTGGGCAGGG...TTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp AAGGCTGAGGCCACAAGGGCTATTACATCGCCCGTGTCCGGGCCAGTCTGGGGGCCCTGCCCACTCAACTaGGGGGCACACTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: KAEATRAITSPVSGPVWGPCPLN*GAHCRP
Trigger: AGGTCTGCAGTGTGCCCCTCAGTTGAGTGGGCAGGG...CCCCCAGACTGGCCCGGACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp GACCTGGCCATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCTTGGATGCCGGAGCCAGAGGCTGTaGCAGCAACAAAGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: DLAMWGPSAALQTASLGCRSQRL*QQQSPL
Trigger: GAGAGGGCTTTGTTGCTGTCACAGCCTCTGGCTCCG...GCATCCAAGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATGGCCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR GCA 90 bp GGCGCGGGAAGACACACTCCCTGCGGCTCCGAGAGCCAAGAGGAATCTGAGCTCACTTGGCCAGCGGGTTaGGGGGTGCCTTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GAGRHTPCGSESQEESELTWPAG*GVPCSW
Trigger: CCAAGAGCAAGGCACCCCGCAACCCGCTGGCCAAGT...GAGCTCAGATTCCTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCCCGCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp TCTGTGAGGTCAGCAGGGAGGGTTATGGCTAGGAGGCTGGGGGCATGGGGTTGGTCCCACAGGCAGAACTaGGTGTCCTGGCCCGCCGAG +
Preference number: 4 (lower is better)
Translates to: SVRSAGRVMARRLGAWGWSHRQN*VSWPAE
Trigger: CTCGGCGGGCCAGGACACGCAGTTCTGCCTGTGGGA...CCAACCCCATGCCCCCAGCCTCCTAGCCATAACCCTCCCTGCTGACCTCACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp AGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTTGGCCCCCGCCAGCTGGGTaGGGGAGACTGTTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: SGGAKPSLGKRDPKIAPWPPPAG*GRLLER
Trigger: CCGCTCCAACAGTCTCCCGCACCCAGCTGGCGGGGG...CCAAGGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp CTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAGCTTCTCCCCACCACTaGCACTGCCGCCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: LNRGDLLPKGWGRKVVEPASPHH*HCRHCH
Trigger: GTGGCAGTGGCGGCAGTGGCAGTGGTGGGGAGAAGC...TGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp GGCGCGGGAAGACACACTCCCTGCGGCTCCGAGAGCCAAGAGGAATCTGAGCTCACAGGGGTGACCTGCTaGCCAAAGGCTGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GAGRHTPCGSESQEESELTGVTC*PKAGGG
Trigger: TCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGT...GAGCTCAGATTCCTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCCCGCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp CATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCTTGGATGCCCCAATTCTCCCACGAAAGGTCCTaGCAGGTCCCCGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HVGPICCPSDGQPWMPQFSHERS*QVPGRL
Trigger: CAGCCTGCCGGGGACCTGGCAGGACCTTTCGTGGGA...GAATTGGGGCATCCAAGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR GCA 90 bp GACGGCCAGCCTTGGATGCCCCAATTCCTAGCTGGCTCTCACACCCACCCCTCTGTGGGGCCCATCTGCTaGCCTTCAGACGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: DGQPWMPQFLAGSHTHPSVGPIC*PSDGQP
Trigger: AGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCAC...AGAGGGGTGGGTGTGAGAGCCAGCTAGGAATTGGGGCATCCAAGGCTGGCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR CCA 90 bp AAGTCGGGGCCTCCAACCGGCCTGGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTACGACGACAGCAGCCTaGGTAGAAATAGAGCTCACG +
Preference number: 4 (lower is better)
Translates to: KSGPPTGLGCLGLERARPTTTAA*VEIELT
Trigger: CGTGAGCTCTATTTCTACCCAGGCTGCTGTCGTCGT...AGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CCAGGGTGGACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTAACTGGTTGAAATCGTaGCAGGTGGGCTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PGWTVLQSGSRGLQPAWGNWLKS*QVGWVP
Trigger: GGGCACCCAGCCCACCTGCCACGATTTCAACCAGTT...ACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTCCACCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp TCTGTGAGGTCAGCAGGGAGGGTTATGGCTAGGAGGCTGGGGGCATGGGGTTGGCAGAACTGCGTGTCCTaGCCCGCCGAGCCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: SVRSAGRVMARRLGAWGWQNCVS*PAEPKR
Trigger: CCGCTTTGGCTCGGCGGGCCAGGACACGCAGTTCTG...CCAACCCCATGCCCCCAGCCTCCTAGCCATAACCCTCCCTGCTGACCTCACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp GGCGCGGGAAGACACACTCCCTGCGGCTCCGAGAGCCAAGAGGAATCTGAGCTCGGGGAGTTGCCTGGTTaGGAGGAGATGCCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: GAGRHTPCGSESQEESELGELPG*EEMPAL
Trigger: CAAGGCGGGCATCTCCTCCCAACCAGGCAACTCCCC...GAGCTCAGATTCCTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCCCGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377735.7
CDS-3UTR TCA 90 bp AGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCTGCACTTGACCCGCTaGGAAGCCCACCAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SLNRGDLLPKGWGRKVVELHLTR*EAHQQR
Trigger: TCGCTGCTGGTGGGCTTCTCAGCGGGTCAAGTGCAG...CTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp CACCAGTTGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCTTTTCCTGCTGCACTTGACCCGCTaGGAAGCCCACCAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: HQLCDSQVRSLPGLRLFLLHLTR*EAHQQR
Trigger: TCGCTGCTGGTGGGCTTCTCAGCGGGTCAAGTGCAG...CAGGAAAAGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGTCCAGGTACTGCACTTaGCCCGCTGAGAAGCCCACC +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKSRYCT*PAEKPT
Trigger: GGTGGGCTTCTCAGCGGGTCAAGTGCAGTACCTGGA...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp TGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGGCGCAGGGGTGGCTaGCGTTGTACAGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: CPKAGGGKWWSQALPGQTRRRGG*RCTGTG
Trigger: ACCTGTACCTGTACAACGTCAGCCACCCCTGCGCCT...CGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp GGCCAGCCTTGGATGCCCCAATTCCTAGCTGGCTCTCACACCCACCCCTCTTTCCACTGCCACCCCGGCTaGTGTTGCCCAGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: GQPWMPQFLAGSHTHPSFHCHPG*CCPGCG
Trigger: ACCACAGCCTGGGCAACATCAGCCGGGGTGGCAGTG...GAAAGAGGGGTGGGTGTGAGAGCCAGCTAGGAATTGGGGCATCCAAGGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR TCA 90 bp TGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGGGTGGGGGACAAGGCTaGGGCCACAAGGGCTATTAC +
Preference number: 4 (lower is better)
Translates to: CPKAGGGKWWSQALPGQTGGGQG*GHKGYY
Trigger: GTAATAGCCCTTGTGGCCTCAGCCTTGTCCCCCACC...CGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp CTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAGAGCCTGAACAGGGGTaGCCTGCTGCCCAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LNRGDLLPKGWGRKVVEPEPEQG*PAAQRL
Trigger: CAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTC...TGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGGGCAGGTGGGCTGGGTaGCCTTGTAGATCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKGRWAG*PCRSAC
Trigger: ACAAGCGGATCTACAAGGGCACCCAGCCCACCTGCC...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp CACCAGTTGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCTTTTCCTGACTTGGCCAGCGGGTTaGGGGGTGCCTTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: HQLCDSQVRSLPGLRLFLTWPAG*GVPCSW
Trigger: CCAAGAGCAAGGCACCCCGCAACCCGCTGGCCAAGT...CAGGAAAAGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp GGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCCCCATCAGCACCGGCTaGTGTCGCCGCCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GKWWSQALPGQTRPQNSSPISTG*CRRLLC
Trigger: GCAGAGGAGGCGGCGACAGCAGCCGGTGCTGATGGG...GGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp AGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTTGGCGGTCCCGCCGCTCCTaGAGTGTGAGCGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: SGGAKPSLGKRDPKIAPWRSRRS*SVSVAK
Trigger: CTTCGCCACGCTCACACTGCAGGAGCGGCGGGACCG...CCAAGGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp GCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAATGCCACTCGGGGAGTTaGCTGGTTGGGAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: AGGGKWWSQALPGQTRPQCHSGS*LVGRRC
Trigger: GCATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCA...TTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp AAGGCTGAGGCCACAAGGGCTATTACATCGCCCGTGTCCGGGCCAGTCTGGGGGTGCCACTCGGGGAGTTaGCTGGTTGGGAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: KAEATRAITSPVSGPVWGCHSGS*LVGRRC
Trigger: GCATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCA...CCCCCAGACTGGCCCGGACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
CDS-3UTR GCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGTGGCTGCGGGCAGGATaGTCTTCTCCCCAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKWLRAG*SSPQEG
Trigger: ACCCTCTTGGGGAGAAGAGCATCCTGCCCGCAGCCA...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGGGAAGACACACTCCCTaGGGCTCCGAGAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKGRHTP*GSESQE
Trigger: CTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCC...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp AAGGCTGAGGCCACAAGGGCTATTACATCGCCCGTGTCCGGGCCAGTCTGGGGGAGTCCCCAAAGCTGCTaGCACCCTGGCCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: KAEATRAITSPVSGPVWGSPQSC*HPGLAL
Trigger: AAGGGCAAGGCCAGGGTGGCAGCAGCTTTGGGGACT...CCCCCAGACTGGCCCGGACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR CCA 90 bp GGCGCGGGAAGACACACTCCCTGCGGCTCCGAGAGCCAAGAGGAATCTGAGCTCGCCCACGCAGGAGCATaGAGTCGAAGTGGAAGACGC +
Preference number: 4 (lower is better)
Translates to: GAGRHTPCGSESQEESELAHAGA*SRSGRR
Trigger: GCGTCTTCCACTTCGACTCCATGCTCCTGCGTGGGC...GAGCTCAGATTCCTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCCCGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp AAGGCTGAGGCCACAAGGGCTATTACATCGCCCGTGTCCGGGCCAGTCTGGGGGTTGACCCAGGACTTGTaGCCATGGCCTCGAGCCACC +
Preference number: 4 (lower is better)
Translates to: KAEATRAITSPVSGPVWGLTQDL*PWPRAT
Trigger: GGTGGCTCGAGGCCATGGCCACAAGTCCTGGGTCAA...CCCCCAGACTGGCCCGGACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp GGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCAGCAGGGGCACCTCGTaGATGCGCGGGCACAGCGCA +
Preference number: 4 (lower is better)
Translates to: GKWWSQALPGQTRPQNSSSRGTS*MRGHSA
Trigger: TGCGCTGTGCCCGCGCATCCACGAGGTGCCCCTGCT...GGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp GGCAGTAAGACCTGGCCATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCCAGATGAGGCCCTCCTaGCAGGCAGTGATGATGCAG +
Preference number: 4 (lower is better)
Translates to: GSKTWPCGAHLLPFRRPAQMRPS*QAVMMQ
Trigger: CTGCATCATCACTGCCTGCCAGGAGGGCCTCATCTG...GGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATGGCCAGGTCTTACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR CCA 90 bp GGCGCGGGAAGACACACTCCCTGCGGCTCCGAGAGCCAAGAGGAATCTGAGCTCTGCTATGAAAAGGGGTaGGAGGCGCTGGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GAGRHTPCGSESQEESELCYEKG*EALGWE
Trigger: CTCCCAGCCCAGCGCCTCCCACCCCTTTTCATAGCA...GAGCTCAGATTCCTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCCCGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGTCCTGCTCCAGCCGCTaGTGTGGGTCACCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKSCSSR*CGSPVV
Trigger: CACAACTGGTGACCCACACCAGCGGCTGGAGCAGGA...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CCAGGGTGGACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTAGGGCCTGGGAAACGTaGTCCTGGGCAGTTCTGATA +
Preference number: 4 (lower is better)
Translates to: PGWTVLQSGSRGLQPAWGRAWET*SWAVLI
Trigger: TATCAGAACTGCCCAGGACCACGTTTCCCAGGCCCT...ACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTCCACCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp TACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACAGACCCGCTGAGACCGGCCTGGGGTGCCTaGGCCTTGAGAGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: YTHRSSTSSPPKGTDPLRPAWGA*ALRGPG
Trigger: GCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGG...TCTCAGCGGGTCTGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGGACGGTTCTCCAGAGTaGAAGTCGGGGCCTCCAACC +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKDGSPE*KSGPPT
Trigger: GGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTC...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp AAGGCTGAGGCCACAAGGGCTATTACATCGCCCGTGTCCGGGCCAGTCTGGGGGCTGCTGCCCAAAGGCTaGGGGAGGAAAGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: KAEATRAITSPVSGPVWGLLPKG*GRKVVE
Trigger: CTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAG...CCCCCAGACTGGCCCGGACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAACTCGGGGAGTTGCCTaGTTGGGAGGAGATGCCCGC +
Preference number: 4 (lower is better)
Translates to: LNRGDLLPKGWGRKVVEPTRGVA*LGGDAR
Trigger: GCGGGCATCTCCTCCCAACCAGGCAACTCCCCGAGT...TGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377735.7
CDS-3UTR CCA 90 bp AAGGCTGAGGCCACAAGGGCTATTACATCGCCCGTGTCCGGGCCAGTCTGGGGGACTCGGGGAGTTGCCTaGTTGGGAGGAGATGCCCTG +
Preference number: 4 (lower is better)
Translates to: KAEATRAITSPVSGPVWGTRGVA*LGGDAL
Trigger: CAGGGCATCTCCTCCCAACCAGGCAACTCCCCGAGT...CCCCCAGACTGGCCCGGACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR CCA 90 bp GACCTGGCCATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCTTGGATGCACAGGCAGTAAGACCTaGCCATGTGGGGCCCATCTG +
Preference number: 4 (lower is better)
Translates to: DLAMWGPSAALQTASLGCTGSKT*PCGAHL
Trigger: CAGATGGGCCCCACATGGCCAGGTCTTACTGCCTGT...GCATCCAAGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATGGCCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR TCA 90 bp GGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCGCTCACGGCCCAAGTTaGAGCAGACGCGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GKWWSQALPGQTRPQNSSAHGPS*SRRGLP
Trigger: GGGGAGACCGCGTCTGCTTCAACTTGGGCCGTGAGC...GGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp CAGAGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGCGAAGCGGCCAATGCTaGATGGTGTGCCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: QSLNRGDLLPKGWGRKVVRSGQC*MVCQAL
Trigger: CAGAGCCTGGCACACCATTCAGCATTGGCCGCTTCG...CACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp AAGTCGGGGCCTCCAACCGGCCTGGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTGTCTTGTTAATACGTTaGTCTGTGAGGTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KSGPPTGLGCLGLERARPVLLIR*SVRSAG
Trigger: CCCTGCTGACCTCACAGATCAACGTATTAACAAGAC...AGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp GGCGCGGGAAGACACACTCCCTGCGGCTCCGAGAGCCAAGAGGAATCTGAGCTCCGGCTTTTCCTGCTATaGAAAGGGGTGGGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: GAGRHTPCGSESQEESELRLFLL*KGVGGA
Trigger: AGCGCCTCCCACCCCTTTTCATAGCAGGAAAAGCCG...GAGCTCAGATTCCTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCCCGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp AAGGCTGAGGCCACAAGGGCTATTACATCGCCCGTGTCCGGGCCAGTCTGGGGGCGGCTTTTCCTGCTATaGAAAGGGGTGGGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: KAEATRAITSPVSGPVWGRLFLL*KGVGGA
Trigger: AGCGCCTCCCACCCCTTTTCATAGCAGGAAAAGCCG...CCCCCAGACTGGCCCGGACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGTCGCGCGTGCGGAATTaGGACTTAATCTCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKSRVRN*DLISAQ
Trigger: CTGCGCGGAGATTAAGTCGCAATTCCGCACGCGCGA...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp TCTGTGAGGTCAGCAGGGAGGGTTATGGCTAGGAGGCTGGGGGCATGGGGTTGGGAGAAGCCCTCGCCCTaGTTCAGCAGGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: SVRSAGRVMARRLGAWGWEKPSP*FSRLYW
Trigger: CCAGTACAGCCTGCTGAAGCAGGGCGAGGGCTTCTC...CCAACCCCATGCCCCCAGCCTCCTAGCCATAACCCTCCCTGCTGACCTCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp AAGGCTGAGGCCACAAGGGCTATTACATCGCCCGTGTCCGGGCCAGTCTGGGGGGGTTGCGGGGTGCCTTaGTCTTGGCAGCATAGACAG +
Preference number: 4 (lower is better)
Translates to: KAEATRAITSPVSGPVWGGCGVP*SWQHRQ
Trigger: CTGTCTATGCTGCCAAGAGCAAGGCACCCCGCAACC...CCCCCAGACTGGCCCGGACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp TCTGTGAGGTCAGCAGGGAGGGTTATGGCTAGGAGGCTGGGGGCATGGGGTTGGCAGCGGGTTGCGGGGTaGCTTGCTCTTGGCAGCATA +
Preference number: 4 (lower is better)
Translates to: SVRSAGRVMARRLGAWGWQRVAG*LALGSI
Trigger: TATGCTGCCAAGAGCAAGGCACCCCGCAACCCGCTG...CCAACCCCATGCCCCCAGCCTCCTAGCCATAACCCTCCCTGCTGACCTCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp TACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACAGACCCGCTGAGACCCCCGCCAGCTGGGTaGGGGAGACTGTTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: YTHRSSTSSPPKGTDPLRPPPAG*GRLLER
Trigger: CCGCTCCAACAGTCTCCCGCACCCAGCTGGCGGGGG...TCTCAGCGGGTCTGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp TACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACAGACCCGCTGAGAGGGGCACCTCGTGGATaGGCGGGCACAGCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: YTHRSSTSSPPKGTDPLRGAPRG*AGTAQC
Trigger: GCACTGCGCTGTGCCCGCGCATCCACGAGGTGCCCC...TCTCAGCGGGTCTGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGCCTGGGCGATCTTCTTaGACACAAGGGGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKPGRSS*TQGAPA
Trigger: TGCTGGAGCCCCTTGTGTGCAAGAAGATCGCCCAGG...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp CTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCATGGCTGCGGGCAGGATaGTCTTCTCCCCAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: LNRGDLLPKGWGRKVVEPWLRAG*SSPQEG
Trigger: ACCCTCTTGGGGAGAAGAGCATCCTGCCCGCAGCCA...TGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp GGCCCGATATCCATGGCTTCACACCACTGTGCCACTCGGGGAGTTGCCTGGTTGCAGAGTCCCCAAAGCTaGTGCCACCCTGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: GPISMASHHCATRGVAWLQSPQS*CHPGLA
Trigger: GGCAAGGCCAGGGTGGCAGCAGCTTTGGGGACTCTG...CAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCCATGGATATCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR GCA 90 bp ACAGGCAGTAAGACCTGGCCATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCACTTTCTGCTGCCTGCTaGCTAGGGCTAGACCCCCTC +
Preference number: 4 (lower is better)
Translates to: TGSKTWPCGAHLLPFRRPLSAAC*LGLDPL
Trigger: GAGGGGGTCTAGCCCTAGGCAGCAGGCAGCAGAAAG...TGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATGGCCAGGTCTTACTGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR GCA 90 bp CATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCTTGGATGCCCCAATTCCCTCTTTCTGCTGCCTaGTGCCTAGGGCTAGACCCC +
Preference number: 4 (lower is better)
Translates to: HVGPICCPSDGQPWMPQFPLSAA*CLGLDP
Trigger: GGGGTCTAGCCCTAGGCAGCAGGCAGCAGAAAGAGG...GAATTGGGGCATCCAAGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR CCA 90 bp GGCGCGGGAAGACACACTCCCTGCGGCTCCGAGAGCCAAGAGGAATCTGAGCTCAGGTCAATGGACCGTTaGCTCCCACGACGACAGCAG +
Preference number: 4 (lower is better)
Translates to: GAGRHTPCGSESQEESELRSMDR*LPRRQQ
Trigger: CTGCTGTCGTCGTGGGAGCCAACGGTCCATTGACCT...GAGCTCAGATTCCTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCCCGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CCAGGGTGGACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTGTGGCAGCAGTGAACTaGTTGAAATCGTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PGWTVLQSGSRGLQPAWGVAAVN*LKSWQV
Trigger: CACCTGCCACGATTTCAACCAGTTCACTGCTGCCAC...ACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTCCACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CAGAGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGCCCACGCAGGAGCATaGAGTCGAAGTGGAAGACGC +
Preference number: 4 (lower is better)
Translates to: QSLNRGDLLPKGWGRKVVAHAGA*SRSGRR
Trigger: GCGTCTTCCACTTCGACTCCATGCTCCTGCGTGGGC...CACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CAGAGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGTTGACCCAGGACTTGTaGCCATGGCCTCGAGCCACC +
Preference number: 4 (lower is better)
Translates to: QSLNRGDLLPKGWGRKVVLTQDL*PWPRAT
Trigger: GGTGGCTCGAGGCCATGGCCACAAGTCCTGGGTCAA...CACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp AGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTTGGCTTGCCCCCGCCAGCTaGGTGCGGGAGACTGTTGGA +
Preference number: 4 (lower is better)
Translates to: SGGAKPSLGKRDPKIAPWLAPAS*VRETVG
Trigger: TCCAACAGTCTCCCGCACCCAGCTGGCGGGGGCAAG...CCAAGGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp AAGGCTGAGGCCACAAGGGCTATTACATCGCCCGTGTCCGGGCCAGTCTGGGGGCAGATGAGGCCCTCCTaGCAGGCAGTGATGATGCAG +
Preference number: 4 (lower is better)
Translates to: KAEATRAITSPVSGPVWGQMRPS*QAVMMQ
Trigger: CTGCATCATCACTGCCTGCCAGGAGGGCCTCATCTG...CCCCCAGACTGGCCCGGACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
CDS-3UTR CCA 90 bp TGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGCAGATGAGGCCCTCCTaGCAGGCAGTGATGATGCAG +
Preference number: 4 (lower is better)
Translates to: CPKAGGGKWWSQALPGQTQMRPS*QAVMMQ
Trigger: CTGCATCATCACTGCCTGCCAGGAGGGCCTCATCTG...CGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CAGAGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGGGGAGTTGCCTGGTTaGGAGGAGATGCCCTCTACC +
Preference number: 4 (lower is better)
Translates to: QSLNRGDLLPKGWGRKVVGELPG*EEMPST
Trigger: GGTAGAGGGCATCTCCTCCCAACCAGGCAACTCCCC...CACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270223.7
CDS-3UTR CCA 90 bp TCTGTGAGGTCAGCAGGGAGGGTTATGGCTAGGAGGCTGGGGGCATGGGGTTGGCAGCAGGGAGGGTTATaGCTAGGAGGCTGGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SVRSAGRVMARRLGAWGWQQGGL*LGGWGH
Trigger: ATGCCCCCAGCCTCCTAGCCATAACCCTCCCTGCTG...CCAACCCCATGCCCCCAGCCTCCTAGCCATAACCCTCCCTGCTGACCTCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
CDS-3UTR CCA 90 bp CTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCATTTGATGAGGGGCCCTaGCTGCGGGCAGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: LNRGDLLPKGWGRKVVEPFDEGP*LRAGCS
Trigger: AGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAA...TGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CCAGGGTGGACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTCTCTTCTTTCCAGGGTaGACGGTTCTCCAGAGTGGA +
Preference number: 4 (lower is better)
Translates to: PGWTVLQSGSRGLQPAWGLFFPG*TVLQSG
Trigger: TCCACTCTGGAGAACCGTCCACCCTGGAAAGAAGAG...ACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTCCACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGGAGCCAAGCCCTCCCTaGGCAAACGAGACCCCAAAA +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKEPSPP*ANETPK
Trigger: TTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTC...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
3UTR CAA 72 bp TGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCTaGGATGCCCCAATTCCTAGCTGGCTCTCACACCCA +
Preference number: 4 (lower is better)
Translates to: CGAHLLPFRRPA*DAPIPSWLSHP
Trigger: TGGGTGTGAGAGCCAGCTAGGAATTGGGGCATCCAAGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR TCA 90 bp CACCAGTTGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCTTTTCCTGCAAAGGCCACAGCGTTaGCCCAGGACTTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: HQLCDSQVRSLPGLRLFLQRPQR*PRTCGH
Trigger: ATGGCCACAAGTCCTGGGTCAACGCTGTGGCCTTTG...CAGGAAAAGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp TCTGTGAGGTCAGCAGGGAGGGTTATGGCTAGGAGGCTGGGGGCATGGGGTTGGGTCCTTGGCGGATCCTaGGTGAGACCATGGGGTAAG +
Preference number: 4 (lower is better)
Translates to: SVRSAGRVMARRLGAWGWVLGGS*VRPWGK
Trigger: CTTACCCCATGGTCTCACTCAGGATCCGCCAAGGAC...CCAACCCCATGCCCCCAGCCTCCTAGCCATAACCCTCCCTGCTGACCTCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR TCA 90 bp ACCTGGCCATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCTTGGATGCCAGATTCTGGTTCGAGTaGCAGGCAGTAAGACCTGGC +
Preference number: 4 (lower is better)
Translates to: TWPCGAHLLPFRRPALDARFWFE*QAVRPG
Trigger: GCCAGGTCTTACTGCCTGTCACTCGAACCAGAATCT...GGCATCCAAGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATGGCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR GCA 90 bp AGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTTGGTGTCGCCGCCTCCTCTaGCCTTGTGGTGTAGGGGTC +
Preference number: 4 (lower is better)
Translates to: SGGAKPSLGKRDPKIAPWCRRLL*PCGVGV
Trigger: GACCCCTACACCACAAGGGCAGAGGAGGCGGCGACA...CCAAGGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp AGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCTGGGCGATCTTCTTaGACACAAGGGGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SLNRGDLLPKGWGRKVVEPGRSS*TQGAPA
Trigger: TGCTGGAGCCCCTTGTGTGCAAGAAGATCGCCCAGG...CTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp CATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCTTGGATGCCCCAATTCCCTGGGCGATCTTCTTaGACACAAGGGGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: HVGPICCPSDGQPWMPQFPGRSS*TQGAPA
Trigger: TGCTGGAGCCCCTTGTGTGCAAGAAGATCGCCCAGG...GAATTGGGGCATCCAAGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR GCA 90 bp AAGGCTGAGGCCACAAGGGCTATTACATCGCCCGTGTCCGGGCCAGTCTGGGGGCTGGTTGGGAGGAGATaGCCTCTACCACTGACTTGC +
Preference number: 4 (lower is better)
Translates to: KAEATRAITSPVSGPVWGLVGRR*PLPLTC
Trigger: GCAAGTCAGTGGTAGAGGGCATCTCCTCCCAACCAG...CCCCCAGACTGGCCCGGACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270223.7
CDS-3UTR GCA 90 bp GGCCCGATATCCATGGCTTCACACCACTGTGCCACTCGGGGAGTTGCCTGGTTGTGCCACTCGGGGAGTTaGCTGGTTGGGAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: GPISMASHHCATRGVAWLCHSGS*LVGRRC
Trigger: GCATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCA...CAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCCATGGATATCGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR GCA 90 bp CATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCTTGGATGCCCCAATTCCACCCCTCTTTCTGCTaGCTGCTGCCTAGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: HVGPICCPSDGQPWMPQFHPSFC*LLPRAR
Trigger: TCTAGCCCTAGGCAGCAGGCAGCAGAAAGAGGGGTG...GAATTGGGGCATCCAAGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR CCA 90 bp TCTGTGAGGTCAGCAGGGAGGGTTATGGCTAGGAGGCTGGGGGCATGGGGTTGGGGTACAGGTGGCCACTaGCGTGTGATGCCAGGAACA +
Preference number: 4 (lower is better)
Translates to: SVRSAGRVMARRLGAWGWGTGGH*RVMPGT
Trigger: TGTTCCTGGCATCACACGCCAGTGGCCACCTGTACC...CCAACCCCATGCCCCCAGCCTCCTAGCCATAACCCTCCCTGCTGACCTCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGTTGTACAGGTACAGGTaGCCACTGGCGTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKLYRYR*PLACDA
Trigger: GGCATCACACGCCAGTGGCCACCTGTACCTGTACAA...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CAGAGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGCCTCCTCTGCCCTTGTaGTGTAGGGGTCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: QSLNRGDLLPKGWGRKVVPPLPL*CRGQRP
Trigger: TGGCCTTTGACCCCTACACCACAAGGGCAGAGGAGG...CACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp GGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCGCGGCCAATGCTGAATaGTGTGCCAGGCTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GKWWSQALPGQTRPQNSSAANAE*CARLCR
Trigger: GCGGCAGAGCCTGGCACACCATTCAGCATTGGCCGC...GGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp GCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAACTGTGAGCCGCTCCTaGGCGATCTTCTTGCACACA +
Preference number: 4 (lower is better)
Translates to: AGGGKWWSQALPGQTRPQTVSRS*AIFLHT
Trigger: TGTGTGCAAGAAGATCGCCCAGGAGCGGCTCACAGT...TTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp TGGCTTCACACCACTGTGCCACTCGGGGAGTTGCCTGGTTGGGAGGAGATGCCCCAGATGAGGCCCTCCTaGCAGGCAGTGATGATGCAG +
Preference number: 4 (lower is better)
Translates to: WLHTTVPLGELPGWEEMPQMRPS*QAVMMQ
Trigger: CTGCATCATCACTGCCTGCCAGGAGGGCCTCATCTG...GGGCATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR CCA 90 bp CTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAACTTGCTGGGTGACCTaGGCCAACTTCCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LNRGDLLPKGWGRKVVEPTCWVT*ANFLPL
Trigger: CAGGGGAAGGAAGTTGGCCCAGGTCACCCAGCAAGT...TGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270223.7
CDS-3UTR CCA 90 bp CACCAGTTGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCTTTTCCTGGAGCCAAGCCCTCCCTaGGCAAACGAGACCCCAAAA +
Preference number: 4 (lower is better)
Translates to: HQLCDSQVRSLPGLRLFLEPSPP*ANETPK
Trigger: TTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTC...CAGGAAAAGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp AGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTTGGAGGCGCAGGGGTGGCTaGCGTTGTACAGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: SGGAKPSLGKRDPKIAPWRRRGG*RCTGTG
Trigger: ACCTGTACCTGTACAACGTCAGCCACCCCTGCGCCT...CCAAGGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp AGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCAAAGTAGCTCTTCATaGGCCCACGCAGGAGCATGG +
Preference number: 4 (lower is better)
Translates to: SLNRGDLLPKGWGRKVVEQSSSS*AHAGAW
Trigger: CCATGCTCCTGCGTGGGCTCATGAAGAGCTACTTTG...CTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp CAGAGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGCAAAGTAGCTCTTCATaGGCCCACGCAGGAGCATGG +
Preference number: 4 (lower is better)
Translates to: QSLNRGDLLPKGWGRKVVQSSSS*AHAGAW
Trigger: CCATGCTCCTGCGTGGGCTCATGAAGAGCTACTTTG...CACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp TCTGTGAGGTCAGCAGGGAGGGTTATGGCTAGGAGGCTGGGGGCATGGGGTTGGAGAGCACGTCTTCAGTaGGGTCCCACAGGCAGAACT +
Preference number: 4 (lower is better)
Translates to: SVRSAGRVMARRLGAWGWRARLQ*GPTGRT
Trigger: AGTTCTGCCTGTGGGACCTCACTGAAGACGTGCTCT...CCAACCCCATGCCCCCAGCCTCCTAGCCATAACCCTCCCTGCTGACCTCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp TGGCTTCACACCACTGTGCCACTCGGGGAGTTGCCTGGTTGGGAGGAGATGCCCTTGGCGGATCCTGAGTaGGACCATGGGGTAAGGGTA +
Preference number: 4 (lower is better)
Translates to: WLHTTVPLGELPGWEEMPLADPE*DHGVRV
Trigger: TACCCTTACCCCATGGTCTCACTCAGGATCCGCCAA...GGGCATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR GCA 90 bp GGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCGGCAGGTGGGCTGGGTaGCCTTGTAGATCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: GKWWSQALPGQTRPQNSSGRWAG*PCRSAC
Trigger: ACAAGCGGATCTACAAGGGCACCCAGCCCACCTGCC...GGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp AGAACCACAGAGTACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACAGGGGCACCTCGTGGATaGGCGGGCACAGCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: RTTEYTHRSSTSSPPKGTGAPRG*AGTAQC
Trigger: GCACTGCGCTGTGCCCGCGCATCCACGAGGTGCCCC...TGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTACTCTGTGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp GGCCCGATATCCATGGCTTCACACCACTGTGCCACTCGGGGAGTTGCCTGGTTGCCTCTACCACTGACTTaGTGGGTGACCTGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: GPISMASHHCATRGVAWLPLPLT*WVTWAN
Trigger: GTTGGCCCAGGTCACCCAGCAAGTCAGTGGTAGAGG...CAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCCATGGATATCGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR GCA 90 bp GACGGCCAGCCTTGGATGCCCCAATTCCTAGCTGGCTCTCACACCCACCCCTCTACAAAGCCCTCTCTCTaGCAATGCCTGCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: DGQPWMPQFLAGSHTHPSTKPSL*QCLPLP
Trigger: GGGAAGAGGCAGGCATTGGCAGAGAGAGGGCTTTGT...AGAGGGGTGGGTGTGAGAGCCAGCTAGGAATTGGGGCATCCAAGGCTGGCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR CCA 90 bp AGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGTTGTACAGGTACAGGTaGCCACTGGCGTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: SLNRGDLLPKGWGRKVVELYRYR*PLACDA
Trigger: GGCATCACACGCCAGTGGCCACCTGTACCTGTACAA...CTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp GACGGCCAGCCTTGGATGCCCCAATTCCTAGCTGGCTCTCACACCCACCCCTCTACTGTGAGCCGCTCCTaGGCGATCTTCTTGCACACA +
Preference number: 4 (lower is better)
Translates to: DGQPWMPQFLAGSHTHPSTVSRS*AIFLHT
Trigger: TGTGTGCAAGAAGATCGCCCAGGAGCGGCTCACAGT...AGAGGGGTGGGTGTGAGAGCCAGCTAGGAATTGGGGCATCCAAGGCTGGCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR CCA 90 bp GGCGCGGGAAGACACACTCCCTGCGGCTCCGAGAGCCAAGAGGAATCTGAGCTCAGAGGTCATTGTACTTaGCAGTGGGTGGGGGACAAG +
Preference number: 4 (lower is better)
Translates to: GAGRHTPCGSESQEESELRGHCT*QWVGDK
Trigger: CTTGTCCCCCACCCACTGCCAAGTACAATGACCTCT...GAGCTCAGATTCCTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCCCGCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp AGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTTGGTTTGATGAGGGGCCCTaGCTGCGGGCAGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: SGGAKPSLGKRDPKIAPWFDEGP*LRAGCS
Trigger: AGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAA...CCAAGGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp AGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTTGGCTGCTGCCCAAAGGCTaGGGGAGGAAAGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SGGAKPSLGKRDPKIAPWLLPKG*GRKVVE
Trigger: CTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAG...CCAAGGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp GGCCCGATATCCATGGCTTCACACCACTGTGCCACTCGGGGAGTTGCCTGGTTGGGGACCCTGAGGTGCTaGGGAAAGAACTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: GPISMASHHCATRGVAWLGTLRC*GKNSGT
Trigger: TGTCCCTGAGTTCTTTCCCCAGCACCTCAGGGTCCC...CAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCCATGGATATCGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR CCA 90 bp AAGACCTGGCCATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCTTGGATACACTAAGATTTCCCTaGCTTCCCCTCACCCCACGG +
Preference number: 4 (lower is better)
Translates to: KTWPCGAHLLPFRRPALDTLRFP*LPLTPR
Trigger: CCGTGGGGTGAGGGGAAGCCAGGGAAATCTTAGTGT...ATCCAAGGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATGGCCAGGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR CCA 90 bp ACAGGCAGTAAGACCTGGCCATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCATCAGACGGCCAGCCTTaGATGCCCCAATTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: TGSKTWPCGAHLLPFRRPSDGQP*MPQFLA
Trigger: AGCTAGGAATTGGGGCATCCAAGGCTGGCCGTCTGA...TGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATGGCCAGGTCTTACTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR TCA 90 bp AAGGCTGAGGCCACAAGGGCTATTACATCGCCCGTGTCCGGGCCAGTCTGGGGGTGTCAATTGGCTTGTTaGGGTCAATGGACCGTTGGC +
Preference number: 4 (lower is better)
Translates to: KAEATRAITSPVSGPVWGCQLAC*GQWTVG
Trigger: GCCAACGGTCCATTGACCTCAACAAGCCAATTGACA...CCCCCAGACTGGCCCGGACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp CAGAGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGTCAACCGCTCCTCATTaGACAGCTTGCTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: QSLNRGDLLPKGWGRKVVSTAPH*TACWCP
Trigger: AGGACACCAGCAAGCTGTTCAATGAGGAGCGGTTGA...CACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp GGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTCGCGCGTGCGGAATTaGGACTTAATCTCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: GKWWSQALPGQTRPQNSSSRVRN*DLISAQ
Trigger: CTGCGCGGAGATTAAGTCGCAATTCCGCACGCGCGA...GGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp TACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACAGACCCGCTGAGATGTCGCCGCCTCCTCTaGCCTTGTGGTGTAGGGGTC +
Preference number: 4 (lower is better)
Translates to: YTHRSSTSSPPKGTDPLRCRRLL*PCGVGV
Trigger: GACCCCTACACCACAAGGGCAGAGGAGGCGGCGACA...TCTCAGCGGGTCTGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp AGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTTGGAGGTCAATGGACCGTTaGCTCCCACGACGACAGCAG +
Preference number: 4 (lower is better)
Translates to: SGGAKPSLGKRDPKIAPWRSMDR*LPRRQQ
Trigger: CTGCTGTCGTCGTGGGAGCCAACGGTCCATTGACCT...CCAAGGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp AGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTTGGAACTGGTTGAAATCGTaGCAGGTGGGCTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SGGAKPSLGKRDPKIAPWNWLKS*QVGWVP
Trigger: GGGCACCCAGCCCACCTGCCACGATTTCAACCAGTT...CCAAGGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACCACCCACCGCCCACTTaGCCAGCGGGTTGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYHPPPT*PAGCGV
Trigger: CACCCCGCAACCCGCTGGCCAAGTGGGCGGTGGGTG...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACCAGTGCCCAGCACCTTaGCGGGGTCCAGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYQCPAP*RGPGGC
Trigger: GCAGCCGCCTGGACCCCGCCAAGGTGCTGGGCACTG...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp GGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCGGGGCCCGATATCCATaGCTTCACACCACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GKWWSQALPGQTRPQNSSGARYP*LHTTVP
Trigger: TGGCACAGTGGTGTGAAGCCATGGATATCGGGCCCC...GGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CACCAGTTGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCTTTTCCTGCAAATTTTGTGCAGGTaGGGGGACTGGAGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: HQLCDSQVRSLPGLRLFLQILCR*GDWSSP
Trigger: TGGACTGCTCCAGTCCCCCCACCTGCACAAAATTTG...CAGGAAAAGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp AGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCAAATTTTGTGCAGGTaGGGGGACTGGAGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: SLNRGDLLPKGWGRKVVEQILCR*GDWSSP
Trigger: TGGACTGCTCCAGTCCCCCCACCTGCACAAAATTTG...CTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp ATTCAGCACAAGGGTAACACAGCACAGGGCCTGGGTACAGTAAAGGCAGCTGTCCTGCACTTGACCCGCTaGGAAGCCCACCAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: IQHKGNTAQGLGTVKAAVLHLTR*EAHQQR
Trigger: TCGCTGCTGGTGGGCTTCTCAGCGGGTCAAGTGCAG...GACAGCTGCCTTTACTGTACCCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR TCA 90 bp TACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACAGACCCGCTGAGATCCAGGTACTGCACTTaGCCCGCTGAGAAGCCCACC +
Preference number: 4 (lower is better)
Translates to: YTHRSSTSSPPKGTDPLRSRYCT*PAEKPT
Trigger: GGTGGGCTTCTCAGCGGGTCAAGTGCAGTACCTGGA...TCTCAGCGGGTCTGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp GGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCAGAGCACGTCTTCAGTaGGGTCCCACAGGCAGAACT +
Preference number: 4 (lower is better)
Translates to: GKWWSQALPGQTRPQNSSRARLQ*GPTGRT
Trigger: AGTTCTGCCTGTGGGACCTCACTGAAGACGTGCTCT...GGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp AGAACCACAGAGTACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACAGGCACCCTCAGAGCCTaGACAGGGGTGACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RTTEYTHRSSTSSPPKGTGTLRA*TGVTCC
Trigger: GCAGCAGGTCACCCCTGTTCAGGCTCTGAGGGTGCC...TGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTACTCTGTGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp CTGTCCTGGCAGTCAGCACTTTCACGCAATAATCAAAGTCCTTGGCGGATCCTGCTGCCACCCTGGCCTTaGCCTTGGGTCCGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: LSWQSALSRNNQSPWRILLPPWP*PWVRPR
Trigger: TCTAGGGCGGACCCAAGGGCAAGGCCAGGGTGGCAG...CAGGATCCGCCAAGGACTTTGATTATTGCGTGAAAGTGCTGACTGCCAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR CCA 90 bp GCTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTATGGGAGGCGCTGGGCTaGGAGCAGGCCTGCACTCCT +
Preference number: 4 (lower is better)
Translates to: AGDRDEGNTDVSEEEVIVWEALG*EQACTP
Trigger: AGGAGTGCAGGCCTGCTCCCAGCCCAGCGCCTCCCA...TACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp GCTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTAGGCCTCCAACCGGCCTaGGGTGCCTGGGCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: AGDRDEGNTDVSEEEVIVGLQPA*GAWALR
Trigger: TCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCC...TACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp GAAAACCCAAGGAGTAAAGTATTCAGCACAAGGGTAACACAGCACAGGGCCTGGGCTCACGGCCCAAGTTaGAGCAGACGCGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: ENPRSKVFSTRVTQHRAWAHGPS*SRRGLP
Trigger: GGGGAGACCGCGTCTGCTTCAACTTGGGCCGTGAGC...CCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAATACTTTACTCCTTGGGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR TCA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACCACTGCCACCCCGGCTaGTGTTGCCCAGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYHCHPG*CCPGCG
Trigger: ACCACAGCCTGGGCAACATCAGCCGGGGTGGCAGTG...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp CACCAGTTGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCTTTTCCTGGTCTTGTTAATACGTTaGTCTGTGAGGTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HQLCDSQVRSLPGLRLFLVLLIR*SVRSAG
Trigger: CCCTGCTGACCTCACAGATCAACGTATTAACAAGAC...CAGGAAAAGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp GGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCGAGCCAAGAGGAATCTaGGCTCTTCTTTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GKWWSQALPGQTRPQNSSEPRGI*ALLSRV
Trigger: CACCCTGGAAAGAAGAGCTCAGATTCCTCTTGGCTC...GGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp AGAACCACAGAGTACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACAGAGCCTGAACAGGGGTaGCCTGCTGCCCAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RTTEYTHRSSTSSPPKGTEPEQG*PAAQRL
Trigger: CAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTC...TGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTACTCTGTGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp ATTCAGCACAAGGGTAACACAGCACAGGGCCTGGGTACAGTAAAGGCAGCTGTCGGCAGGTGGGCTGGGTaGCCTTGTAGATCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: IQHKGNTAQGLGTVKAAVGRWAG*PCRSAC
Trigger: ACAAGCGGATCTACAAGGGCACCCAGCCCACCTGCC...GACAGCTGCCTTTACTGTACCCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR GCA 90 bp TACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACAGACCCGCTGAGAGGTTGCGGGGTGCCTTaGTCTTGGCAGCATAGACAG +
Preference number: 4 (lower is better)
Translates to: YTHRSSTSSPPKGTDPLRGCGVP*SWQHRQ
Trigger: CTGTCTATGCTGCCAAGAGCAAGGCACCCCGCAACC...TCTCAGCGGGTCTGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACCTCACACAGGCCAGGTaGCGGCCATCGGGCGAGAAG +
Preference number: 4 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYLTQAR*RPSGEK
Trigger: CTTCTCGCCCGATGGCCGGCACCTGGCCTGTGTGAG...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp AGAACCACAGAGTACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACAACAGGGGTGACCTGCTaGCCAAAGGCTGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RTTEYTHRSSTSSPPKGTTGVTC*PKAGGG
Trigger: TCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGT...TGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTACTCTGTGGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp AGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTTGGACGACGACAGCAGCCTaGGTAGAAATAGAGCTCACG +
Preference number: 4 (lower is better)
Translates to: SGGAKPSLGKRDPKIAPWTTTAA*VEIELT
Trigger: CGTGAGCTCTATTTCTACCCAGGCTGCTGTCGTCGT...CCAAGGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGGATCCGCTTGTCAATTaGCTTGTTGAGGTCAATGGA +
Preference number: 4 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKDPLVN*LVEVNG
Trigger: TCCATTGACCTCAACAAGCCAATTGACAAGCGGATC...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACCGCAGGCAGCCATCCTaGCTCACACAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYRRQPS*LTQARC
Trigger: GCACCTGGCCTGTGTGAGCCAGGATGGCTGCCTGCG...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp TACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACAGACCCGCTGAGAGGGGCCCGATATCCATaGCTTCACACCACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: YTHRSSTSSPPKGTDPLRGARYP*LHTTVP
Trigger: TGGCACAGTGGTGTGAAGCCATGGATATCGGGCCCC...TCTCAGCGGGTCTGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp GGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCAGAGGTCATTGTACTTaGCAGTGGGTGGGGGACAAG +
Preference number: 4 (lower is better)
Translates to: GKWWSQALPGQTRPQNSSRGHCT*QWVGDK
Trigger: CTTGTCCCCCACCCACTGCCAAGTACAATGACCTCT...GGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACCAGCTGGGCAGGGCCTaGGAAACGTGGTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYQLGRA*ETWSWA
Trigger: TGCCCAGGACCACGTTTCCCAGGCCCTGCCCAGCTG...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp GGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTGTCAATTGGCTTGTTaGGGTCAATGGACCGTTGGC +
Preference number: 4 (lower is better)
Translates to: GKWWSQALPGQTRPQNSSCQLAC*GQWTVG
Trigger: GCCAACGGTCCATTGACCTCAACAAGCCAATTGACA...GGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp AGAACCACAGAGTACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACACGAAGCGGCCAATGCTaGATGGTGTGCCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RTTEYTHRSSTSSPPKGTRSGQC*MVCQAL
Trigger: CAGAGCCTGGCACACCATTCAGCATTGGCCGCTTCG...TGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTACTCTGTGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR TCA 90 bp CTGTCCTGGCAGTCAGCACTTTCACGCAATAATCAAAGTCCTTGGCGGATCCTGGGTGGGGGACAAGGCTaGGGCCACAAGGGCTATTAC +
Preference number: 4 (lower is better)
Translates to: LSWQSALSRNNQSPWRILGGGQG*GHKGYY
Trigger: GTAATAGCCCTTGTGGCCTCAGCCTTGTCCCCCACC...CAGGATCCGCCAAGGACTTTGATTATTGCGTGAAAGTGCTGACTGCCAGGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR GCA 90 bp AGCTTCCTGTCCTGGCAGTCAGCACTTTCACGCAATAATCAAAGTCCTTGGCGGGGCTTCACACCACTGTaGCACTCGGGGAGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: SFLSWQSALSRNNQSPWRGFTPL*HSGSCL
Trigger: CAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCC...CCGCCAAGGACTTTGATTATTGCGTGAAAGTGCTGACTGCCAGGACAGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR GCA 90 bp AGAACCACAGAGTACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACAGGAAGACACACTCCCTaGGGCTCCGAGAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: RTTEYTHRSSTSSPPKGTGRHTP*GSESQE
Trigger: CTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCC...TGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTACTCTGTGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp AGCTTCCTGTCCTGGCAGTCAGCACTTTCACGCAATAATCAAAGTCCTTGGCGGGGAGGGACCCTGAGGTaGTGGGGAAAGAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: SFLSWQSALSRNNQSPWRGGTLR*WGKNSG
Trigger: CCCTGAGTTCTTTCCCCAGCACCTCAGGGTCCCTCC...CCGCCAAGGACTTTGATTATTGCGTGAAAGTGCTGACTGCCAGGACAGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR CCA 90 bp ATTCAGCACAAGGGTAACACAGCACAGGGCCTGGGTACAGTAAAGGCAGCTGTCAGGTCAATGGACCGTTaGCTCCCACGACGACAGCAG +
Preference number: 4 (lower is better)
Translates to: IQHKGNTAQGLGTVKAAVRSMDR*LPRRQQ
Trigger: CTGCTGTCGTCGTGGGAGCCAACGGTCCATTGACCT...GACAGCTGCCTTTACTGTACCCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR CCA 90 bp AGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGGATCCGCTTGTCAATTaGCTTGTTGAGGTCAATGGA +
Preference number: 4 (lower is better)
Translates to: SLNRGDLLPKGWGRKVVEDPLVN*LVEVNG
Trigger: TCCATTGACCTCAACAAGCCAATTGACAAGCGGATC...CTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp ATTCAGCACAAGGGTAACACAGCACAGGGCCTGGGTACAGTAAAGGCAGCTGTCAACTGGTTGAAATCGTaGCAGGTGGGCTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: IQHKGNTAQGLGTVKAAVNWLKS*QVGWVP
Trigger: GGGCACCCAGCCCACCTGCCACGATTTCAACCAGTT...GACAGCTGCCTTTACTGTACCCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR CCA 90 bp AGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGTCAGATATGTCACCTTaGTCTTGTCGATCAACCGCT +
Preference number: 4 (lower is better)
Translates to: SLNRGDLLPKGWGRKVVESDMSP*SCRSTA
Trigger: AGCGGTTGATCGACAAGACCAAGGTGACATATCTGA...CTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp GCTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTAGCCGAGGCGCAGGGGTaGCTGACGTTGTACAGGTAC +
Preference number: 4 (lower is better)
Translates to: AGDRDEGNTDVSEEEVIVAEAQG*LTLYRY
Trigger: GTACCTGTACAACGTCAGCCACCCCTGCGCCTCGGC...TACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp GCTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTAGCGGCCAATGCTGAATaGTGTGCCAGGCTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: AGDRDEGNTDVSEEEVIVAANAE*CARLCR
Trigger: GCGGCAGAGCCTGGCACACCATTCAGCATTGGCCGC...TACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp GCTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTAGGGGAGTTGCCTGGTTaGGAGGAGATGCCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: AGDRDEGNTDVSEEEVIVGELPG*EEMPWG
Trigger: TCCCCAGGGCATCTCCTCCCAACCAGGCAACTCCCC...TACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR TCA 90 bp GAAAACCCAAGGAGTAAAGTATTCAGCACAAGGGTAACACAGCACAGGGCCTGGTCCAGGTACTGCACTTaGCCCGCTGAGAAGCCCACC +
Preference number: 4 (lower is better)
Translates to: ENPRSKVFSTRVTQHRAWSRYCT*PAEKPT
Trigger: GGTGGGCTTCTCAGCGGGTCAAGTGCAGTACCTGGA...CCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAATACTTTACTCCTTGGGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR GCA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACGGCTTCACACCACTGTaGCACTCGGGGAGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYGFTPL*HSGSCL
Trigger: CAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCC...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
CDS-3UTR GCA 90 bp TACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACAGACCCGCTGAGACTGGGGAAAGCGGACTaGCTAGAACCACAGAGTACA +
Preference number: 4 (lower is better)
Translates to: YTHRSSTSSPPKGTDPLRLGKAD*LEPQST
Trigger: TGTACTCTGTGGTTCTAGGCAGTCCGCTTTCCCCAG...TCTCAGCGGGTCTGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp GAAAACCCAAGGAGTAAAGTATTCAGCACAAGGGTAACACAGCACAGGGCCTGGCCGGGAGGTGGATCTTaGAGTGAGCAGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: ENPRSKVFSTRVTQHRAWPGGGS*SEQRSR
Trigger: GCGCGATCTCTGCTCACTGCAAGATCCACCTCCCGG...CCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAATACTTTACTCCTTGGGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR CCA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACACTCGGGGAGTTGCCTaGTTGGGAGGAGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYTRGVA*LGGDAL
Trigger: GAGGGCATCTCCTCCCAACCAGGCAACTCCCCGAGT...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270223.7
CDS-3UTR CCA 90 bp CTGTCCTGGCAGTCAGCACTTTCACGCAATAATCAAAGTCCTTGGCGGATCCTGGGGGCCCGATATCCATaGCTTCACACCACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LSWQSALSRNNQSPWRILGARYP*LHTTVP
Trigger: TGGCACAGTGGTGTGAAGCCATGGATATCGGGCCCC...CAGGATCCGCCAAGGACTTTGATTATTGCGTGAAAGTGCTGACTGCCAGGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR CCA 90 bp GGCGCGGGAAGACACACTCCCTGCGGCTCCGAGAGCCAAGAGGAATCTGAGCTCGCAGTCCATCCATCATaGTTAGTCTTGTTAATACGT +
Preference number: 4 (lower is better)
Translates to: GAGRHTPCGSESQEESELAVHPS*LVLLIR
Trigger: ACGTATTAACAAGACTAACCATGATGGATGGACTGC...GAGCTCAGATTCCTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCCCGCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp GGCCCGATATCCATGGCTTCACACCACTGTGCCACTCGGGGAGTTGCCTGGTTGAATAATCAAAGTCCTTaGCGGATCCTGAGTGAGACC +
Preference number: 4 (lower is better)
Translates to: GPISMASHHCATRGVAWLNNQSP*RILSET
Trigger: GGTCTCACTCAGGATCCGCCAAGGACTTTGATTATT...CAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCCATGGATATCGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR TCA 90 bp GAAAACCCAAGGAGTAAAGTATTCAGCACAAGGGTAACACAGCACAGGGCCTGGAGGTGGATCTTGCAGTaGGCAGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: ENPRSKVFSTRVTQHRAWRWILQ*AEIAPL
Trigger: CAGTGGCGCGATCTCTGCTCACTGCAAGATCCACCT...CCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAATACTTTACTCCTTGGGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR GCA 90 bp GCTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACCTCTACCACTGACTTaGTGGGTGACCTGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: AGDRDEGNTDVSEEEVIVPLPLT*WVTWAN
Trigger: GTTGGCCCAGGTCACCCAGCAAGTCAGTGGTAGAGG...TACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000537879.1
CDS-3UTR CCA 90 bp GCTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTAACTTGCTGGGTGACCTaGGCCAACTTCCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: AGDRDEGNTDVSEEEVIVTCWVT*ANFLPL
Trigger: CAGGGGAAGGAAGTTGGCCCAGGTCACCCAGCAAGT...TACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000537879.1
CDS-3UTR CCA 90 bp AGAACCACAGAGTACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACACATTGTACTTGGCAGTaGGTGGGGGACAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RTTEYTHRSSTSSPPKGTHCTWQ*VGDKAE
Trigger: CTCAGCCTTGTCCCCCACCCACTGCCAAGTACAATG...TGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTACTCTGTGGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CTGTCCTGGCAGTCAGCACTTTCACGCAATAATCAAAGTCCTTGGCGGATCCTGAGGGGAGGGGGAAACTaGAGCTCCCTTCTAACTTGG +
Preference number: 4 (lower is better)
Translates to: LSWQSALSRNNQSPWRILRGGGN*SSLLTW
Trigger: CCAAGTTAGAAGGGAGCTCCAGTTTCCCCCTCCCCT...CAGGATCCGCCAAGGACTTTGATTATTGCGTGAAAGTGCTGACTGCCAGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR CCA 90 bp GAAAACCCAAGGAGTAAAGTATTCAGCACAAGGGTAACACAGCACAGGGCCTGGAGAAGTTGGGGGCTCTaGGGGCTGCAATCACCTCCT +
Preference number: 4 (lower is better)
Translates to: ENPRSKVFSTRVTQHRAWRSWGL*GLQSPP
Trigger: AGGAGGTGATTGCAGCCCCCAGAGCCCCCAACTTCT...CCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAATACTTTACTCCTTGGGTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR TCA 90 bp ATTCAGCACAAGGGTAACACAGCACAGGGCCTGGGTACAGTAAAGGCAGCTGTCCAATCACCTCCTCATTaGACAGCTTGCTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: IQHKGNTAQGLGTVKAAVQSPPH*TACWCP
Trigger: AGGACACCAGCAAGCTGTTCAATGAGGAGGTGATTG...GACAGCTGCCTTTACTGTACCCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR GCA 90 bp ATTCAGCACAAGGGTAACACAGCACAGGGCCTGGGTACAGTAAAGGCAGCTGTCGCAGCTGTCATTAGCTaGTGTCACCCCATTCTCCAT +
Preference number: 4 (lower is better)
Translates to: IQHKGNTAQGLGTVKAAVAAVIS*CHPILH
Trigger: ATGGAGAATGGGGTGACAGCAGCTAATGACAGCTGC...GACAGCTGCCTTTACTGTACCCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR CCA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACCATTGTACTTGGCAGTaGGTGGGGGACAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYHCTWQ*VGDKAE
Trigger: CTCAGCCTTGTCCCCCACCCACTGCCAAGTACAATG...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
CDS-3UTR CCA 90 bp TGGCAGTCAGCACTTTCACGCAATAATCAAAGTCCTTGGCGGATCCTGAGTGAGCATTGTACTTGGCAGTaGGTGGGGGACAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: WQSALSRNNQSPWRILSEHCTWQ*VGDKAE
Trigger: CTCAGCCTTGTCCCCCACCCACTGCCAAGTACAATG...CTCACTCAGGATCCGCCAAGGACTTTGATTATTGCGTGAAAGTGCTGACTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR CCA 90 bp AGAACCACAGAGTACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACACTCTTCTTTCCAGGGTaGACGGTTCTCCAGAGTGGA +
Preference number: 4 (lower is better)
Translates to: RTTEYTHRSSTSSPPKGTLFFPG*TVLQSG
Trigger: TCCACTCTGGAGAACCGTCCACCCTGGAAAGAAGAG...TGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTACTCTGTGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACGCTAGCTTCCTGTCCTaGCAGTCAGCACTTTCACGC +
Preference number: 4 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYASFLS*QSALSR
Trigger: GCGTGAAAGTGCTGACTGCCAGGACAGGAAGCTAGC...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR CCA 90 bp GCTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTAGGGTTAGAGACCACCTaGGCTTCAGCCAGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: AGDRDEGNTDVSEEEVIVGLETT*ASASVK
Trigger: CTTGACACTGGCTGAAGCCCAGGTGGTCTCTAACCC...TACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR GCA 90 bp GCTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACTGGGGAAAGCGGACTaGCTAGAACCACAGAGTACA +
Preference number: 4 (lower is better)
Translates to: AGDRDEGNTDVSEEEVIVLGKAD*LEPQST
Trigger: TGTACTCTGTGGTTCTAGGCAGTCCGCTTTCCCCAG...TACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR GCA 90 bp ATTCAGCACAAGGGTAACACAGCACAGGGCCTGGGTACAGTAAAGGCAGCTGTCTGTTCCGCAGGCAGCTaGATCCTAATGGCATATAGT +
Preference number: 4 (lower is better)
Translates to: IQHKGNTAQGLGTVKAAVCSAGS*ILMAYS
Trigger: ACTATATGCCATTAGGATGCAGCTGCCTGCGGAACA...GACAGCTGCCTTTACTGTACCCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR CCA 90 bp GAAAACCCAAGGAGTAAAGTATTCAGCACAAGGGTAACACAGCACAGGGCCTGGACGACGACAGCAGCCTaGGTAGAAATAGAGCTCACG +
Preference number: 4 (lower is better)
Translates to: ENPRSKVFSTRVTQHRAWTTTAA*VEIELT
Trigger: CGTGAGCTCTATTTCTACCCAGGCTGCTGTCGTCGT...CCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAATACTTTACTCCTTGGGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR CCA 90 bp GCTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTAGTGGCAGCAGTGAACTaGTTGAAATCGTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: AGDRDEGNTDVSEEEVIVVAAVN*LKSWQV
Trigger: CACCTGCCACGATTTCAACCAGTTCACTGCTGCCAC...TACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp GAAAACCCAAGGAGTAAAGTATTCAGCACAAGGGTAACACAGCACAGGGCCTGGGTGGCAGCAGTGAACTaGTTGAAATCGTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ENPRSKVFSTRVTQHRAWVAAVN*LKSWQV
Trigger: CACCTGCCACGATTTCAACCAGTTCACTGCTGCCAC...CCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAATACTTTACTCCTTGGGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR CCA 90 bp GCTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACAAATTTTGTGCAGGTaGGGGGACTGGAGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: AGDRDEGNTDVSEEEVIVQILCR*GDWSSP
Trigger: TGGACTGCTCCAGTCCCCCCACCTGCACAAAATTTG...TACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
CDS-3UTR CCA 90 bp ATTCAGCACAAGGGTAACACAGCACAGGGCCTGGGTACAGTAAAGGCAGCTGTCGATCCGCTTGTCAATTaGCTTGTTGAGGTCAATGGA +
Preference number: 4 (lower is better)
Translates to: IQHKGNTAQGLGTVKAAVDPLVN*LVEVNG
Trigger: TCCATTGACCTCAACAAGCCAATTGACAAGCGGATC...GACAGCTGCCTTTACTGTACCCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR TCA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACGTCTTGTTAATACGTTaGTCTGTGAGGTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYVLLIR*SVRSAG
Trigger: CCCTGCTGACCTCACAGATCAACGTATTAACAAGAC...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
CDS-3UTR CCA 90 bp GCTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTATCAGATATGTCACCTTaGTCTTGTCGATCAACCGCT +
Preference number: 4 (lower is better)
Translates to: AGDRDEGNTDVSEEEVIVSDMSP*SCRSTA
Trigger: AGCGGTTGATCGACAAGACCAAGGTGACATATCTGA...TACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CCA 90 bp GCTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTAGCAGTCCATCCATCATaGTTAGTCTTGTTAATACGT +
Preference number: 4 (lower is better)
Translates to: AGDRDEGNTDVSEEEVIVAVHPS*LVLLIR
Trigger: ACGTATTAACAAGACTAACCATGATGGATGGACTGC...TACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
CDS CCA 90 bp CCGGGCCGCCCGCCTTGCCCCCGCCAGCTGGGTGCGGGAGACTGTTaGAGCGGGACAGCGAGCGAGGCAGGGGGCCTGGGCCAGGCTCGC +
Preference number: 5 (lower is better)
Translates to: PGRPPCPRQLGAGDC*SGTASEAGGLGQAR
Trigger: GCGAGCCTGGCCCAGGCCCCCTGCCTCGCTCGCTGTCCCGCTCCAACAGTCTCCCGCACCCAGCTGGCGGGGGCAAGGCGGGCGGCCCGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS GCA 90 bp TGTGAGCGTGGCGAAGCGGCCAATGCTGAATGGTGTGCCAGGCTCTaGCGCCACACCCGGGCCGCCCGCCTTGCCCCCGCCAGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: CERGEAANAEWCARL*RHTRAARLAPASWV
Trigger: CACCCAGCTGGCGGGGGCAAGGCGGGCGGCCCGGGTGTGGCGGCAGAGCCTGGCACACCATTCAGCATTGGCCGCTTCGCCACGCTCACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CCA 90 bp GCCCGCCGAGCCAAAGCGGTAAGTAATGGAGCCAGCCTTGGGCAGTaGAGAGAGCGGGGCGCCCCCGGCCGAGCCTGTGCCCGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: ARRAKAVSNGASLGQ*RERGAPGRACARSL
Trigger: GAGGCTGCGGGCACAGGCTCGGCCGGGGGCGCCCCGCTCTCTCCACTGCCCAAGGCTGGCTCCATTACTTACCGCTTTGGCTCGGCGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CCA 90 bp CCGCCGCTCCTGCAGTGTGAGCGTGGCGAAGCGGCCAATGCTGAATaGTGTGCCAGGCTCTGCCGCCACACCCGGGCCGCCCGCCTTGCC +
Preference number: 5 (lower is better)
Translates to: PPLLQCERGEAANAE*CARLCRHTRAARLA
Trigger: GGCAAGGCGGGCGGCCCGGGTGTGGCGGCAGAGCCTGGCACACCATTCAGCATTGGCCGCTTCGCCACGCTCACACTGCAGGAGCGGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CCA 90 bp TGCCTGCCTCTTCCCACGAAAGGTCCTGCCAGGTCCCCGGCAGGCTaGTGTGGGGCCACTCACCGCCTTGCCCGGCCGGGCCCAGGTGCA +
Preference number: 5 (lower is better)
Translates to: CLPLPTKGPARSPAG*CGATHRLARPGPGA
Trigger: TGCACCTGGGCCCGGCCGGGCAAGGCGGTGAGTGGCCCCACACCAGCCTGCCGGGGACCTGGCAGGACCTTTCGTGGGAAGAGGCAGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR CAA 90 bp CCAGGGTGGACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTGCAGTGCCCAGCACCTaGGCGGGGTCCAGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: PGWTVLQSGSRGLQPAWGAVPST*AGSRRL
Trigger: CAGCCGCCTGGACCCCGCCAAGGTGCTGGGCACTGC...ACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTCCACCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS GCA 90 bp GCCGCTCCGCTCCCCATCAGCACCGGCTGCTGTCGCCGCCTCCTCTaGCCTTGTGGTGTAGGGGTCAAAGGCCACAGCGTTGACCCAGGA +
Preference number: 5 (lower is better)
Translates to: AAPLPISTGCCRRLL*PCGVGVKGHSVDPG
Trigger: TCCTGGGTCAACGCTGTGGCCTTTGACCCCTACACCACAAGGGCAGAGGAGGCGGCGACAGCAGCCGGTGCTGATGGGGAGCGGAGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp AAGTCGGGGCCTCCAACCGGCCTGGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTCAGGGGTGGCTGACGTaGTACAGGTACAGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: KSGPPTGLGCLGLERARPQGWLT*YRYRWP
Trigger: TGGCCACCTGTACCTGTACAACGTCAGCCACCCCTG...AGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp CTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAGCAGTGCCCAGCACCTaGGCGGGGTCCAGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: LNRGDLLPKGWGRKVVEPAVPST*AGSRRL
Trigger: CAGCCGCCTGGACCCCGCCAAGGTGCTGGGCACTGC...TGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp GACGGCCAGCCTTGGATGCCCCAATTCCTAGCTGGCTCTCACACCCACCCCTCTGCAGTGCCCAGCACCTaGGCGGGGTCCAGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: DGQPWMPQFLAGSHTHPSAVPST*AGSRRL
Trigger: CAGCCGCCTGGACCCCGCCAAGGTGCTGGGCACTGC...AGAGGGGTGGGTGTGAGAGCCAGCTAGGAATTGGGGCATCCAAGGCTGGCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS CCA 90 bp CGCAGGAGCATGGAGTCGAAGTGGAAGACGCGCAGGCAGCCATCCTaGCTCACACAGGCCAGGTGCCGGCCATCGGGCGAGAAGGCGAAC +
Preference number: 5 (lower is better)
Translates to: RRSMESKWKTRRQPS*LTQARCRPSGEKAN
Trigger: GTTCGCCTTCTCGCCCGATGGCCGGCACCTGGCCTGTGTGAGCCAGGATGGCTGCCTGCGCGTCTTCCACTTCGACTCCATGCTCCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CCA 90 bp ATGCCCGCCTTGCCCGGCCGGGCCCAGGTGCAGATGAGGCCCTCCTaGCAGGCAGTGATGATGCAGTCCTCCAGGAACAGGAGGACTGTG +
Preference number: 5 (lower is better)
Translates to: MPALPGRAQVQMRPS*QAVMMQSSRNRRTV
Trigger: CACAGTCCTCCTGTTCCTGGAGGACTGCATCATCACTGCCTGCCAGGAGGGCCTCATCTGCACCTGGGCCCGGCCGGGCAAGGCGGGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377735.7
CDS CCA 90 bp CTCACCGCCTTGCCCGGCCGGGCCCAGGTGCAGATGAGGCCCTCCTaGCAGGCAGTGATGATGCAGTCCTCCAGGAACAGGAGGACTGTG +
Preference number: 5 (lower is better)
Translates to: LTALPGRAQVQMRPS*QAVMMQSSRNRRTV
Trigger: CACAGTCCTCCTGTTCCTGGAGGACTGCATCATCACTGCCTGCCAGGAGGGCCTCATCTGCACCTGGGCCCGGCCGGGCAAGGCGGTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR CAA 90 bp AAGTCGGGGCCTCCAACCGGCCTGGGGTGCCTGGGCCTTGAGAGGGCCAGGCCTGCAGCAGTGAACTGGTaGAAATCGTGGCAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: KSGPPTGLGCLGLERARPAAVNW*KSWQVG
Trigger: GCCCACCTGCCACGATTTCAACCAGTTCACTGCTGC...AGGCCTGGCCCTCTCAAGGCCCAGGCACCCCAGGCCGGTTGGAGGCCCCGACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp CTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCATCACCCACCGCCCACTaGGCCAGCGGGTTGCGGGGT +
Preference number: 5 (lower is better)
Translates to: LNRGDLLPKGWGRKVVEPSPTAH*ASGLRG
Trigger: ACCCCGCAACCCGCTGGCCAAGTGGGCGGTGGGTGA...TGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp TGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGGGGTGCGGGAGACTGTaGGAGCGGGACAGCGAGCGA +
Preference number: 5 (lower is better)
Translates to: CPKAGGGKWWSQALPGQTGCGRL*ERDSER
Trigger: TCGCTCGCTGTCCCGCTCCAACAGTCTCCCGCACCC...CGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp CCAGGGTGGACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTGTGCCACTCGGGGAGTaGCCTGGTTGGGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: PGWTVLQSGSRGLQPAWGVPLGE*PGWEEM
Trigger: CATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCAC...ACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTCCACCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CCA 90 bp CACCCACCGCCCACTTGGCCAGCGGGTTGCGGGGTGCCTTGCTCTTaGCAGCATAGACAGAGAAGCCCTCGCCCTGCTTCAGCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: HPPPTWPAGCGVPCS*QHRQRSPRPASAGC
Trigger: ACAGCCTGCTGAAGCAGGGCGAGGGCTTCTCTGTCTATGCTGCCAAGAGCAAGGCACCCCGCAACCCGCTGGCCAAGTGGGCGGTGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CCA 90 bp GTGAACGCCTTGCCCGGCCGGGCCCAGGTGCAGATGAGGCCCTCCTaGCAGGCAGTGATGATGCAGTCCTCCAGGAACAGGAGGACTGTG +
Preference number: 5 (lower is better)
Translates to: VNALPGRAQVQMRPS*QAVMMQSSRNRRTV
Trigger: CACAGTCCTCCTGTTCCTGGAGGACTGCATCATCACTGCCTGCCAGGAGGGCCTCATCTGCACCTGGGCCCGGCCGGGCAAGGCGTTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270223.7
CDS-3UTR CAA 90 bp GCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAGAGAAGGCGAACTCGTaGAGGGGCCCCTCACCCACC +
Preference number: 5 (lower is better)
Translates to: AGGGKWWSQALPGQTRPQEKANS*RGPSPT
Trigger: GGTGGGTGAGGGGCCCCTCAACGAGTTCGCCTTCTC...TTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp GCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAGCTCACGGCCCAAGTaGAAGCAGACGCGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: AGGGKWWSQALPGQTRPQSSRPK*KQTRSP
Trigger: GGGAGACCGCGTCTGCTTCAACTTGGGCCGTGAGCT...TTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp AGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCACTTGGCCAGCGGGTaGCGGGGTGCCTTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: SLNRGDLLPKGWGRKVVEHLASG*RGALLL
Trigger: CAAGAGCAAGGCACCCCGCAACCCGCTGGCCAAGTG...CTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp AGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTTGGTCACCCACCGCCCACTaGGCCAGCGGGTTGCGGGGT +
Preference number: 5 (lower is better)
Translates to: SGGAKPSLGKRDPKIAPWSPTAH*ASGLRG
Trigger: ACCCCGCAACCCGCTGGCCAAGTGGGCGGTGGGTGA...CCAAGGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp CAGAGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGAAGGCGAACTCGTaGAGGGGCCCCTCACCCACC +
Preference number: 5 (lower is better)
Translates to: QSLNRGDLLPKGWGRKVVEKANS*RGPSPT
Trigger: GGTGGGTGAGGGGCCCCTCAACGAGTTCGCCTTCTC...CACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp GGCAGTAAGACCTGGCCATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCAGCCTCCTGGGCGATCTTCTaGCACACAAGGGGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GSKTWPCGAHLLPFRRPASWAIF*HTRGSS
Trigger: GCTGGAGCCCCTTGTGTGCAAGAAGATCGCCCAGGA...GGCTGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATGGCCAGGTCTTACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR CAA 90 bp GGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTCGTCTGTGAACGCCTaGCCCGGCCGGGCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: GKWWSQALPGQTRPQNSSSSVNA*PGRAQV
Trigger: CACCTGGGCCCGGCCGGGCAAGGCGTTCACAGACGA...GGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270223.7
CDS-3UTR CAA 90 bp TGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGCGGGGAGTTGCCTGGTaGGGAGGAGATGCCCTCTAC +
Preference number: 5 (lower is better)
Translates to: CPKAGGGKWWSQALPGQTRGVAW*GGDALY
Trigger: GTAGAGGGCATCTCCTCCCAACCAGGCAACTCCCCG...CGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270223.7
CDS GCA 90 bp CACCCCACGGAGCCAGAGGCTGTGACAGCAACAAAGCCCTCTCTCTaGCAATGCCTGCCTCTTCCCACGAAAGGTCCTGCCAGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: HPTEPEAVTATKPSL*QCLPLPTKGPARSP
Trigger: CGGGGACCTGGCAGGACCTTTCGTGGGAAGAGGCAGGCATTGGCAGAGAGAGGGCTTTGTTGCTGTCACAGCCTCTGGCTCCGTGGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS-3UTR CAA 90 bp GCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAATCCTGGGCGATCTTCTaGCACACAAGGGGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: AGGGKWWSQALPGQTRPQSWAIF*HTRGSS
Trigger: GCTGGAGCCCCTTGTGTGCAAGAAGATCGCCCAGGA...TTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CCA 90 bp GTGATGATGCAGTCCTCCAGGAACAGGAGGACTGTGAGCCGCTCCTaGGCGATCTTCTTGCACACAAGGGGCTCCAGCAGGGGCACCTCG +
Preference number: 5 (lower is better)
Translates to: VMMQSSRNRRTVSRS*AIFLHTRGSSRGTS
Trigger: CGAGGTGCCCCTGCTGGAGCCCCTTGTGTGCAAGAAGATCGCCCAGGAGCGGCTCACAGTCCTCCTGTTCCTGGAGGACTGCATCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000602829.1
CDS-3UTR CAA 90 bp CTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCACAGGGGTGGCTGACGTaGTACAGGTACAGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: LNRGDLLPKGWGRKVVEPQGWLT*YRYRWP
Trigger: TGGCCACCTGTACCTGTACAACGTCAGCCACCCCTG...TGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp GGCGCGGGAAGACACACTCCCTGCGGCTCCGAGAGCCAAGAGGAATCTGAGCTCTCAAAGGCCACAGCGTaGACCCAGGACTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: GAGRHTPCGSESQEESELSKATA*TQDLWP
Trigger: TGGCCACAAGTCCTGGGTCAACGCTGTGGCCTTTGA...GAGCTCAGATTCCTCTTGGCTCTCGGAGCCGCAGGGAGTGTGTCTTCCCGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp TGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGTCAAAGGCCACAGCGTaGACCCAGGACTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: CPKAGGGKWWSQALPGQTSKATA*TQDLWP
Trigger: TGGCCACAAGTCCTGGGTCAACGCTGTGGCCTTTGA...CGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp TGGCTTCACACCACTGTGCCACTCGGGGAGTTGCCTGGTTGGGAGGAGATGCCCGAGCTCCCTTCTAACTaGGGAGGGACCCTGAGGTGC +
Preference number: 5 (lower is better)
Translates to: WLHTTVPLGELPGWEEMPELPSN*GGTLRC
Trigger: GCACCTCAGGGTCCCTCCCAAGTTAGAAGGGAGCTC...GGGCATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS GCA 90 bp GGGCCCGATATCCATGGCTTCACACCACTGTGCCACTCGGGGAGTTaGCTGGTTGGGAGGAGATGCCCTCTACCACTGACTTGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: GPDIHGFTPLCHSGS*LVGRRCPLPLTCWV
Trigger: CACCCAGCAAGTCAGTGGTAGAGGGCATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCCATGGATATCGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270223.7
CDS-3UTR CAA 90 bp CACCAGTTGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCTTTTCCTGGCAGCAGTGAACTGGTaGAAATCGTGGCAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: HQLCDSQVRSLPGLRLFLAAVNW*KSWQVG
Trigger: GCCCACCTGCCACGATTTCAACCAGTTCACTGCTGC...CAGGAAAAGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp GGAAAGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCGTGCCACTCGGGGAGTaGCCTGGTTGGGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: GKWWSQALPGQTRPQNSSVPLGE*PGWEEM
Trigger: CATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCAC...GGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp CAGAGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGAAAACACCGAGGACTTaGATGAGGGGCCCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: QSLNRGDLLPKGWGRKVVKTPRT*MRGPGC
Trigger: GCAGCCAGGGCCCCTCATCAAAGTCCTCGGTGTTTT...CACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp CACCAGTTGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCTTTTCCTGAAAACACCGAGGACTTaGATGAGGGGCCCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: HQLCDSQVRSLPGLRLFLKTPRT*MRGPGC
Trigger: GCAGCCAGGGCCCCTCATCAAAGTCCTCGGTGTTTT...CAGGAAAAGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp ACAGGCAGTAAGACCTGGCCATGTGGGGCCCATCTGCTGCCCTTCAGACGGCCATTCAGACGGCCAGCCTaGGATGCCCCAATTCCTAGC +
Preference number: 5 (lower is better)
Translates to: TGSKTWPCGAHLLPFRRPFRRPA*DAPIPS
Trigger: GCTAGGAATTGGGGCATCCAAGGCTGGCCGTCTGAA...TGGCCGTCTGAAGGGCAGCAGATGGGCCCCACATGGCCAGGTCTTACTGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS TCA 90 bp GCAGGGGTGGCTGACGTTGTACAGGTACAGGTGGCCACTGGCGTGTaGTGCCAGGAACAGGCTCTCCGACTCAGGCAGCCACTTCAGATA +
Preference number: 5 (lower is better)
Translates to: AGVADVVQVQVATGV*CQEQALRLRQPLQI
Trigger: TATCTGAAGTGGCTGCCTGAGTCGGAGAGCCTGTTCCTGGCATCACACGCCAGTGGCCACCTGTACCTGTACAACGTCAGCCACCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS GCA 90 bp CAAGGAGCCTCGATGTCCCATCTTTGGCGAGGGGACAGTCCTGCTTaGCACAGAATTGTCCTGTATCTCGGGGTCCTCAACCTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: QGASMSHLWRGDSPA*HRIVLYLGVLNLRA
Trigger: GGCCCGGAGGTTGAGGACCCCGAGATACAGGACAATTCTGTGGCAAGCAGGACTGTCCCCTCGCCAAAGATGGGACATCGAGGCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601370.1
CDS-3UTR CAA 90 bp AGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTTGGGAGGTCAATGGACCGTaGGCTCCCACGACGACAGCA +
Preference number: 5 (lower is better)
Translates to: SGGAKPSLGKRDPKIAPWEVNGP*APTTTA
Trigger: TGCTGTCGTCGTGGGAGCCAACGGTCCATTGACCTC...CCAAGGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp CTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCACAGAGGAAGAGGTCATaGTACTTGGCAGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: LNRGDLLPKGWGRKVVEPQRKRS*YLAVGG
Trigger: CCCACCCACTGCCAAGTACAATGACCTCTTCCTCTG...TGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp CAGAGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGCAGAGGAAGAGGTCATaGTACTTGGCAGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: QSLNRGDLLPKGWGRKVVQRKRS*YLAVGG
Trigger: CCCACCCACTGCCAAGTACAATGACCTCTTCCTCTG...CACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp TGGCTTCACACCACTGTGCCACTCGGGGAGTTGCCTGGTTGGGAGGAGATGCCCCAGAGGAAGAGGTCATaGTACTTGGCAGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: WLHTTVPLGELPGWEEMPQRKRS*YLAVGG
Trigger: CCCACCCACTGCCAAGTACAATGACCTCTTCCTCTG...GGGCATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS GCA 90 bp GCTCCAAGGAGCCTCGATGTCCCATCTTTGGCGAGGGGACAGTCCTaGTTGCCACAGAATTGTCCTGTATCTCGGGGTCCTCAACCTCCG +
Preference number: 5 (lower is better)
Translates to: APRSLDVPSLARGQS*LPQNCPVSRGPQPP
Trigger: CGGAGGTTGAGGACCCCGAGATACAGGACAATTCTGTGGCAAGCAGGACTGTCCCCTCGCCAAAGATGGGACATCGAGGCTCCTTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601370.1
CDS GCA 90 bp ATGGAAACATGGGGAAACAGAGGCTGCTGCAAGGTGGCCACAGGGTaGTCCAAGGAGCCTCGATGTCCCATCTTTGGCGAGGGGACAGTC +
Preference number: 5 (lower is better)
Translates to: METWGNRGCCKVATG*SKEPRCPIFGEGTV
Trigger: GACTGTCCCCTCGCCAAAGATGGGACATCGAGGCTCCTTGGAGCACCCTGTGGCCACCTTGCAGCAGCCTCTGTTTCCCCATGTTTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601370.1
CDS CCA 90 bp GACACCAGGTCATGGAAACATGGGGAAACAGAGGCTGCTGCAAGGTaGCCACAGGGTGCTCCAAGGAGCCTCGATGTCCCATCTTTGGCG +
Preference number: 5 (lower is better)
Translates to: DTRSWKHGETEAAAR*PQGAPRSLDVPSLA
Trigger: CGCCAAAGATGGGACATCGAGGCTCCTTGGAGCACCCTGTGGCCACCTTGCAGCAGCCTCTGTTTCCCCATGTTTCCATGACCTGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601370.1
CDS-3UTR CAA 90 bp CTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGCCAATCAACCGCTCCTCATaGAACAGCTTGCTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: LNRGDLLPKGWGRKVVEPINRSS*NSLLVS
Trigger: GGACACCAGCAAGCTGTTCAATGAGGAGCGGTTGAT...TGGCTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp CACCAGTTGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCTTTTCCTGATCAACCGCTCCTCATaGAACAGCTTGCTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: HQLCDSQVRSLPGLRLFLINRSS*NSLLVS
Trigger: GGACACCAGCAAGCTGTTCAATGAGGAGCGGTTGAT...CAGGAAAAGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACTCGTCTGTGAACGCCTaGCCCGGCCGGGCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYSSVNA*PGRAQV
Trigger: CACCTGGGCCCGGCCGGGCAAGGCGTTCACAGACGA...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000537879.1
CDS-3UTR CAA 90 bp CCAGGGTGGACGGTTCTCCAGAGTGGAAGTCGGGGCCTCCAACCGGCCTGGGGTAGTCTTGTTAATACGTaGATCTGTGAGGTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PGWTVLQSGSRGLQPAWGSLVNT*ICEVSR
Trigger: CCTGCTGACCTCACAGATCAACGTATTAACAAGACT...ACCCCAGGCCGGTTGGAGGCCCCGACTTCCACTCTGGAGAACCGTCCACCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp AGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGGAGAAGAGGTCATTGTACTaGGCAGTGGGTGGGGGACAA +
Preference number: 5 (lower is better)
Translates to: SLNRGDLLPKGWGRKVVEKRSLY*AVGGGQ
Trigger: TTGTCCCCCACCCACTGCCAAGTACAATGACCTCTT...CTCCACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS GCA 90 bp AAGACAGATGGACACCAGGTCATGGAAACATGGGGAAACAGAGGCTaGTGCAAGGTGGCCACAGGGTGCTCCAAGGAGCCTCGATGTCCC +
Preference number: 5 (lower is better)
Translates to: KTDGHQVMETWGNRG*CKVATGCSKEPRCP
Trigger: GGGACATCGAGGCTCCTTGGAGCACCCTGTGGCCACCTTGCAGCAGCCTCTGTTTCCCCATGTTTCCATGACCTGGTGTCCATCTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601370.1
CDS CCA 90 bp CTTGTTGAGGTCAATGGACCGTTGGCTCCCACGACGACAGCAGCCTaGGTAGAAATAGAGCTCACGGCCCAAGTTGAAGCAGACGCGGTC +
Preference number: 5 (lower is better)
Translates to: LVEVNGPLAPTTTAA*VEIELTAQVEADAV
Trigger: GACCGCGTCTGCTTCAACTTGGGCCGTGAGCTCTATTTCTACCCAGGCTGCTGTCGTCGTGGGAGCCAACGGTCCATTGACCTCAACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000598237.1
ENST00000601370.1
CDS CCA 90 bp ATCGTGGCAGGTGGGCTGGGTGCCCTTGTAGATCCGCTTGTCAATTaGCTTGTTGAGGTCAATGGACCGTTGGCTCCCACGACGACAGCA +
Preference number: 5 (lower is better)
Translates to: IVAGGLGALVDPLVN*LVEVNGPLAPTTTA
Trigger: TGCTGTCGTCGTGGGAGCCAACGGTCCATTGACCTCAACAAGCCAATTGACAAGCGGATCTACAAGGGCACCCAGCCCACCTGCCACGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000598237.1
ENST00000601370.1
CDS CCA 90 bp CAAGGTGGCCACAGGGTGCTCCAAGGAGCCTCGATGTCCCATCTTTaGCGAGGGGACAGTCCTGCTTGCCACAGAATTGTCCTGTATCTC +
Preference number: 5 (lower is better)
Translates to: QGGHRVLQGASMSHL*RGDSPACHRIVLYL
Trigger: GAGATACAGGACAATTCTGTGGCAAGCAGGACTGTCCCCTCGCCAAAGATGGGACATCGAGGCTCCTTGGAGCACCCTGTGGCCACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601370.1
CDS CCA 90 bp GCTCCCAAACTGGGGAAGACAGATGGACACCAGGTCATGGAAACATaGGGAAACAGAGGCTGCTGCAAGGTGGCCACAGGGTGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: APKLGKTDGHQVMET*GNRGCCKVATGCSK
Trigger: CTTGGAGCACCCTGTGGCCACCTTGCAGCAGCCTCTGTTTCCCCATGTTTCCATGACCTGGTGTCCATCTGTCTTCCCCAGTTTGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601370.1
CDS-3UTR CAA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGTTGTCAATTGGCTTGTaGAGGTCAATGGACCGTTGG +
Preference number: 5 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKLSIGL*RSMDRW
Trigger: CCAACGGTCCATTGACCTCAACAAGCCAATTGACAA...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp CAGAGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGCGCTTGTCAATTGGCTaGTTGAGGTCAATGGACCGT +
Preference number: 5 (lower is better)
Translates to: QSLNRGDLLPKGWGRKVVRLSIG*LRSMDR
Trigger: ACGGTCCATTGACCTCAACAAGCCAATTGACAAGCG...CACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp AAGGCTGAGGCCACAAGGGCTATTACATCGCCCGTGTCCGGGCCAGTCTGGGGGTTGCTGGTGTCCTTTTaGATGAGATCCAGGTACTGC +
Preference number: 5 (lower is better)
Translates to: KAEATRAITSPVSGPVWGLLVSF*MRSRYC
Trigger: GCAGTACCTGGATCTCATCAAAAAGGACACCAGCAA...CCCCCAGACTGGCCCGGACACGGGCGATGTAATAGCCCTTGTGGCCTCAGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp CACCAGTTGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCTTTTCCTGTATGTCACCTTGGTCTaGTCGATCAACCGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: HQLCDSQVRSLPGLRLFLYVTLV*SINRSS
Trigger: TGAGGAGCGGTTGATCGACAAGACCAAGGTGACATA...CAGGAAAAGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp CCGAGGACTTTGATGAGGGGCCCTGGCTGCGGGCAGGATGCTCTTCTCCCCAAGTTCAGATATGTCACCTaGGTCTTGTCGATCAACCGC +
Preference number: 5 (lower is better)
Translates to: PRTLMRGPGCGQDALLPKFRYVT*VLSINR
Trigger: GCGGTTGATCGACAAGACCAAGGTGACATATCTGAA...CTTGGGGAGAAGAGCATCCTGCCCGCAGCCAGGGCCCCTCATCAAAGTCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACGGGTGCGGGAGACTGTaGGAGCGGGACAGCGAGCGA +
Preference number: 5 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYGCGRL*ERDSER
Trigger: TCGCTCGCTGTCCCGCTCCAACAGTCTCCCGCACCC...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp TACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACAGACCCGCTGAGATCCTGGGCGATCTTCTaGCACACAAGGGGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: YTHRSSTSSPPKGTDPLRSWAIF*HTRGSS
Trigger: GCTGGAGCCCCTTGTGTGCAAGAAGATCGCCCAGGA...TCTCAGCGGGTCTGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACCGGGGAGTTGCCTGGTaGGGAGGAGATGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYRGVAW*GGDALG
Trigger: CCCCAGGGCATCTCCTCCCAACCAGGCAACTCCCCG...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS TCA 90 bp GCTGGTGTCCTTTTTGATGAGATCCAGGTACTGCACTTGACCCGCTaGGAAGCCCACCAGCAGCGAGATGGTCTCGGTGGCAGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: AGVLFDEIQVLHLTR*EAHQQRDGLGGSSE
Trigger: TTCACTGCTGCCACCGAGACCATCTCGCTGCTGGTGGGCTTCTCAGCGGGTCAAGTGCAGTACCTGGATCTCATCAAAAAGGACACCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000597053.1
ENST00000598237.1
ENST00000601370.1
CDS GCA 90 bp AACACAGCACAGGGCCTGGGTACAGTAAAGGCAGCTGTCATTAGCTaGTGTCACCCCATTCTCCATCTCTCCCTGGTCCTGCCCCTCTCA +
Preference number: 5 (lower is better)
Translates to: NTAQGLGTVKAAVIS*CHPILHLSLVLPLS
Trigger: TGAGAGGGGCAGGACCAGGGAGAGATGGAGAATGGGGTGACAGCAGCTAATGACAGCTGCCTTTACTGTACCCAGGCCCTGTGCTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS CCA 90 bp GGGAAACTGGAGCTCCCTTCTAACTTGGGAGGGACCCTGAGGTGCTaGGGAAAGAACTCAGGGACAGTCCTACCTCTACCACTGACTTGC +
Preference number: 5 (lower is better)
Translates to: GKLELPSNLGGTLRC*GKNSGTVLPLPLTC
Trigger: GCAAGTCAGTGGTAGAGGTAGGACTGTCCCTGAGTTCTTTCCCCAGCACCTCAGGGTCCCTCCCAAGTTAGAAGGGAGCTCCAGTTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS CCA 90 bp GGAGAGAAGCTCCCAAACTGGGGAAGACAGATGGACACCAGGTCATaGAAACATGGGGAAACAGAGGCTGCTGCAAGGTGGCCACAGGGT +
Preference number: 5 (lower is better)
Translates to: GEKLPNWGRQMDTRS*KHGETEAAARWPQG
Trigger: ACCCTGTGGCCACCTTGCAGCAGCCTCTGTTTCCCCATGTTTCCATGACCTGGTGTCCATCTGTCTTCCCCAGTTTGGGAGCTTCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601370.1
CDS CCA 90 bp CCCAGGTCCTCCTCGGAGAGAAGCTCCCAAACTGGGGAAGACAGATaGACACCAGGTCATGGAAACATGGGGAAACAGAGGCTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: PRSSSERSSQTGEDR*TPGHGNMGKQRLLQ
Trigger: TTGCAGCAGCCTCTGTTTCCCCATGTTTCCATGACCTGGTGTCCATCTGTCTTCCCCAGTTTGGGAGCTTCTCTCCGAGGAGGACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601370.1
CDS-3UTR CAA 90 bp CAGAGCCTGAACAGGGGTGACCTGCTGCCCAAAGGCTGGGGGAGGAAAGTGGTGTTGCTGGTGTCCTTTTaGATGAGATCCAGGTACTGC +
Preference number: 5 (lower is better)
Translates to: QSLNRGDLLPKGWGRKVVLLVSF*MRSRYC
Trigger: GCAGTACCTGGATCTCATCAAAAAGGACACCAGCAA...CACCACTTTCCTCCCCCAGCCTTTGGGCAGCAGGTCACCCCTGTTCAGGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACCACTTGGCCAGCGGGTaGCGGGGTGCCTTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYHLASG*RGALLL
Trigger: CAAGAGCAAGGCACCCCGCAACCCGCTGGCCAAGTG...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp AGAACCACAGAGTACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACACCGCCTCCTCTGCCCTaGTGGTGTAGGGGTCAAAGG +
Preference number: 5 (lower is better)
Translates to: RTTEYTHRSSTSSPPKGTPPPLP*WCRGQR
Trigger: CCTTTGACCCCTACACCACAAGGGCAGAGGAGGCGG...TGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTACTCTGTGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp AGCTTCCTGTCCTGGCAGTCAGCACTTTCACGCAATAATCAAAGTCCTTGGCGGGTGCCACTCGGGGAGTaGCCTGGTTGGGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: SFLSWQSALSRNNQSPWRVPLGE*PGWEEM
Trigger: CATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCAC...CCGCCAAGGACTTTGATTATTGCGTGAAAGTGCTGACTGCCAGGACAGGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS-3UTR CAA 90 bp AGAACCACAGAGTACACACACAGGTCCTCTACATCATCTCCTCCGAAGGGGACACTCGCGCGTGCGGAATaGCGACTTAATCTCCGCGCA +
Preference number: 5 (lower is better)
Translates to: RTTEYTHRSSTSSPPKGTLARAE*RLNLRA
Trigger: TGCGCGGAGATTAAGTCGCAATTCCGCACGCGCGAG...TGTCCCCTTCGGAGGAGATGATGTAGAGGACCTGTGTGTGTACTCTGTGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp GAAAACCCAAGGAGTAAAGTATTCAGCACAAGGGTAACACAGCACAGGGCCTGGAGCTCACGGCCCAAGTaGAAGCAGACGCGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: ENPRSKVFSTRVTQHRAWSSRPK*KQTRSP
Trigger: GGGAGACCGCGTCTGCTTCAACTTGGGCCGTGAGCT...CCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAATACTTTACTCCTTGGGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR CAA 90 bp ATTCAGCACAAGGGTAACACAGCACAGGGCCTGGGTACAGTAAAGGCAGCTGTCGCAGCAGTGAACTGGTaGAAATCGTGGCAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: IQHKGNTAQGLGTVKAAVAAVNW*KSWQVG
Trigger: GCCCACCTGCCACGATTTCAACCAGTTCACTGCTGC...GACAGCTGCCTTTACTGTACCCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR CAA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACCCGCCTCCTCTGCCCTaGTGGTGTAGGGGTCAAAGG +
Preference number: 5 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYPPPLP*WCRGQR
Trigger: CCTTTGACCCCTACACCACAAGGGCAGAGGAGGCGG...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp CACCAGTTGTGTGACTCGCAGGTCCGTTCCCTCCCTGGGCTCCGGCTTTTCCTGAGTCTTGTTAATACGTaGATCTGTGAGGTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: HQLCDSQVRSLPGLRLFLSLVNT*ICEVSR
Trigger: CCTGCTGACCTCACAGATCAACGTATTAACAAGACT...CAGGAAAAGCCGGAGCCCAGGGAGGGAACGGACCTGCGAGTCACACAACTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp TCTGTGAGGTCAGCAGGGAGGGTTATGGCTAGGAGGCTGGGGGCATGGGGTTGGAGTCTTGTTAATACGTaGATCTGTGAGGTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SVRSAGRVMARRLGAWGWSLVNT*ICEVSR
Trigger: CCTGCTGACCTCACAGATCAACGTATTAACAAGACT...CCAACCCCATGCCCCCAGCCTCCTAGCCATAACCCTCCCTGCTGACCTCACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
CDS-3UTR CAA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACCTCGCGCGTGCGGAATaGCGACTTAATCTCCGCGCA +
Preference number: 5 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYLARAE*RLNLRA
Trigger: TGCGCGGAGATTAAGTCGCAATTCCGCACGCGCGAG...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp AGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTTGGTTGTCAATTGGCTTGTaGAGGTCAATGGACCGTTGG +
Preference number: 5 (lower is better)
Translates to: SGGAKPSLGKRDPKIAPWLSIGL*RSMDRW
Trigger: CCAACGGTCCATTGACCTCAACAAGCCAATTGACAA...CCAAGGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp AGTGGTGGAGCCAAGCCCTCCCTGGGCAAACGAGACCCCAAAATAGCTCCTTGGTTCAGATATGTCACCTaGGTCTTGTCGATCAACCGC +
Preference number: 5 (lower is better)
Translates to: SGGAKPSLGKRDPKIAPWFRYVT*VLSINR
Trigger: GCGGTTGATCGACAAGACCAAGGTGACATATCTGAA...CCAAGGAGCTATTTTGGGGTCTCGTTTGCCCAGGGAGGGCTTGGCTCCACCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp ATTCAGCACAAGGGTAACACAGCACAGGGCCTGGGTACAGTAAAGGCAGCTGTCCGCTTGTCAATTGGCTaGTTGAGGTCAATGGACCGT +
Preference number: 5 (lower is better)
Translates to: IQHKGNTAQGLGTVKAAVRLSIG*LRSMDR
Trigger: ACGGTCCATTGACCTCAACAAGCCAATTGACAAGCG...GACAGCTGCCTTTACTGTACCCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR CAA 90 bp CTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACAAGAGGTCATTGTACTaGGCAGTGGGTGGGGGACAA +
Preference number: 5 (lower is better)
Translates to: LGTGMRVTLMFQRKRSLYKRSLY*AVGGGQ
Trigger: TTGTCCCCCACCCACTGCCAAGTACAATGACCTCTT...GTACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
CDS-3UTR CAA 90 bp GCTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTAAAGAGGTCATTGTACTaGGCAGTGGGTGGGGGACAA +
Preference number: 5 (lower is better)
Translates to: AGDRDEGNTDVSEEEVIVKRSLY*AVGGGQ
Trigger: TTGTCCCCCACCCACTGCCAAGTACAATGACCTCTT...TACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000537879.1
CDS-3UTR CAA 90 bp GAAAACCCAAGGAGTAAAGTATTCAGCACAAGGGTAACACAGCACAGGGCCTGGGCAATCACCTCCTCATaGAACAGCTTGCTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: ENPRSKVFSTRVTQHRAWAITSS*NSLLVS
Trigger: GGACACCAGCAAGCTGTTCAATGAGGAGGTGATTGC...CCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAATACTTTACTCCTTGGGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS CCA 90 bp AGGCTCAGAGAATGGTCACCTTCCCAAAGTCACATGATGAGTAAATaGTGCAGCAGGGCTTTGAATCCAAAGCCTCCAGAGCCCAGAACT +
Preference number: 5 (lower is better)
Translates to: RLREWSPSQSHMMSK*CSRALNPKPPEPRT
Trigger: AGTTCTGGGCTCTGGAGGCTTTGGATTCAAAGCCCTGCTGCACCATTTACTCATCATGTGACTTTGGGAAGGTGACCATTCTCTGAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602469.1
CDS-3UTR CAA 90 bp GCTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTACGCTTGTCAATTGGCTaGTTGAGGTCAATGGACCGT +
Preference number: 5 (lower is better)
Translates to: AGDRDEGNTDVSEEEVIVRLSIG*LRSMDR
Trigger: ACGGTCCATTGACCTCAACAAGCCAATTGACAAGCG...TACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp GCTGGGGACAGGGATGAGGGTAACACTGATGTTTCAGAGGAAGAGGTCATTGTATATGTCACCTTGGTCTaGTCGATCAACCGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: AGDRDEGNTDVSEEEVIVYVTLV*SINRSS
Trigger: TGAGGAGCGGTTGATCGACAAGACCAAGGTGACATA...TACAATGACCTCTTCCTCTGAAACATCAGTGTTACCCTCATCCCTGTCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS-3UTR CAA 90 bp GAAAACCCAAGGAGTAAAGTATTCAGCACAAGGGTAACACAGCACAGGGCCTGGTTGTCAATTGGCTTGTaGAGGTCAATGGACCGTTGG +
Preference number: 5 (lower is better)
Translates to: ENPRSKVFSTRVTQHRAWLSIGL*RSMDRW
Trigger: CCAACGGTCCATTGACCTCAACAAGCCAATTGACAA...CCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAATACTTTACTCCTTGGGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS-3UTR CAA 90 bp GAAAACCCAAGGAGTAAAGTATTCAGCACAAGGGTAACACAGCACAGGGCCTGGTTGCTGGTGTCCTTTTaGATGAGATCCAGGTACTGC +
Preference number: 5 (lower is better)
Translates to: ENPRSKVFSTRVTQHRAWLLVSF*MRSRYC
Trigger: GCAGTACCTGGATCTCATCAAAAAGGACACCAGCAA...CCAGGCCCTGTGCTGTGTTACCCTTGTGCTGAATACTTTACTCCTTGGGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS GCA 90 bp CATCAACTAAGTCCCGACTTATTTACTAGCCTCAATTCTCTAATCTaGAAAATGGGCAGCACACTTCTGTATCCACTGGTTGATGAAAAC +
Preference number: 5 (lower is better)
Translates to: HQLSPDLFTSLNSLI*KMGSTLLYPLVDEN
Trigger: GTTTTCATCAACCAGTGGATACAGAAGTGTGCTGCCCATTTTGCAGATTAGAGAATTGAGGCTAGTAAATAAGTCGGGACTTAGTTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602469.1
CDS CAA 90 bp CCCGGGCCGCCCGCCTTGCCCCCGCCAGCTGGGTGCGGGAGACTGTaGGAGCGGGACAGCGAGCGAGGCAGGGGGCCTGGGCCAGGCTCG +
Preference number: 6 (lower is better)
Translates to: PGPPALPPPAGCGRL*ERDSERGRGPGPGS
Trigger: CGAGCCTGGCCCAGGCCCCCTGCCTCGCTCGCTGTCCCGCTCCAACAGTCTCCCGCACCCAGCTGGCGGGGGCAAGGCGGGCGGCCCGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CCA 72 bp CGCCACACCCGGGCCGCCCGCCTTGCCCCCGCCAGCTaGGTGCGGGAGACTGTTGGAGCGGGACAGCGAGCG +
Preference number: 6 (lower is better)
Translates to: RHTRAARLAPAS*VRETVGAGQRA
Trigger: CGCTCGCTGTCCCGCTCCAACAGTCTCCCGCACCCAGCTGGCGGGGGCAAGGCGGGCGGCCCGGGTGTGGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS GCA 72 bp GCAGGGGCACCTCGTGGATGCGCGGGCACAGCGCAGTaGCCAGCACCTTGGCGGGGTCCAGGCGGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: AGAPRGCAGTAQ*PAPWRGPGGCG
Trigger: CCCGCAGCCGCCTGGACCCCGCCAAGGTGCTGGGCACTGCGCTGTGCCCGCGCATCCACGAGGTGCCCCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000602829.1
CDS CCA 72 bp CCGCCTTGCCCCCGCCAGCTGGGTGCGGGAGACTGTTaGAGCGGGACAGCGAGCGAGGCAGGGGGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: PPCPRQLGAGDC*SGTASEAGGLG
Trigger: GCCCAGGCCCCCTGCCTCGCTCGCTGTCCCGCTCCAACAGTCTCCCGCACCCAGCTGGCGGGGGCAAGGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CAA 72 bp CCCGCCTTGCCCCCGCCAGCTGGGTGCGGGAGACTGTaGGAGCGGGACAGCGAGCGAGGCAGGGGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: PALPPPAGCGRL*ERDSERGRGPG
Trigger: CCCAGGCCCCCTGCCTCGCTCGCTGTCCCGCTCCAACAGTCTCCCGCACCCAGCTGGCGGGGGCAAGGCGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CAA 72 bp GGTCCCCGGCAGGCTGGTGTGGGGCCACTCACCGCCTaGCCCGGCCGGGCCCAGGTGCAGATGAGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: GPRQAGVGPLTA*PGRAQVQMRPS
Trigger: GGAGGGCCTCATCTGCACCTGGGCCCGGCCGGGCAAGGCGGTGAGTGGCCCCACACCAGCCTGCCGGGGACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS GCA 72 bp GGCGAAGCGGCCAATGCTGAATGGTGTGCCAGGCTCTaGCGCCACACCCGGGCCGCCCGCCTTGCCCCCGCC +
Preference number: 6 (lower is better)
Translates to: GEAANAEWCARL*RHTRAARLAPA
Trigger: GGCGGGGGCAAGGCGGGCGGCCCGGGTGTGGCGGCAGAGCCTGGCACACCATTCAGCATTGGCCGCTTCGCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS GCA 72 bp GCGGCACCGGAGTCTGGGCGGAAGCCGGACCCGACCTaGGAGCGGCGCCGTCGCCCGGGAGTAGCTTGTAGA +
Preference number: 6 (lower is better)
Translates to: AAPESGRKPDPT*ERRRRPGVACR
Trigger: TCTACAAGCTACTCCCGGGCGACGGCGCCGCTCGCAGGTCGGGTCCGGCTTCCGCCCAGACTCCGGTGCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000601370.1
CDS TCA 72 bp CCAGGTGCCGGCCATCGGGCGAGAAGGCGAACTCGTTaGGGGGCCCCTCACCCACCGCCCACTTGGCCAGCG +
Preference number: 6 (lower is better)
Translates to: PGAGHRARRRTR*GAPHPPPTWPA
Trigger: CGCTGGCCAAGTGGGCGGTGGGTGAGGGGCCCCTCAACGAGTTCGCCTTCTCGCCCGATGGCCGGCACCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CAA 72 bp GCCAGGTGCCGGCCATCGGGCGAGAAGGCGAACTCGTaGAGGGGCCCCTCACCCACCGCCCACTTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: ARCRPSGEKANS*RGPSPTAHLAS
Trigger: GCTGGCCAAGTGGGCGGTGGGTGAGGGGCCCCTCAACGAGTTCGCCTTCTCGCCCGATGGCCGGCACCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CAA 90 bp GGGGCCCGATATCCATGGCTTCACACCACTGTGCCACTCGGGGAGTaGCCTGGTTGGGAGGAGATGCCCGCCTTGCCCGGCCGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: GARYPWLHTTVPLGE*PGWEEMPALPGRAQ
Trigger: CTGGGCCCGGCCGGGCAAGGCGGGCATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCCATGGATATCGGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377735.7
CDS CCA 72 bp ACAGAGAAGCCCTCGCCCTGCTTCAGCAGGCTGTACTaGGGCGGGGCCGAGGCGCAGGGGTGGCTGACGTTG +
Preference number: 6 (lower is better)
Translates to: TEKPSPCFSRLY*GGAEAQGWLTL
Trigger: CAACGTCAGCCACCCCTGCGCCTCGGCCCCGCCCCAGTACAGCCTGCTGAAGCAGGGCGAGGGCTTCTCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CCA 72 bp CTGCAGTGTGAGCGTGGCGAAGCGGCCAATGCTGAATaGTGTGCCAGGCTCTGCCGCCACACCCGGGCCGCC +
Preference number: 6 (lower is better)
Translates to: LQCERGEAANAE*CARLCRHTRAA
Trigger: GGCGGCCCGGGTGTGGCGGCAGAGCCTGGCACACCATTCAGCATTGGCCGCTTCGCCACGCTCACACTGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CCA 72 bp CTTCACACCACTGTGCCACTCGGGGAGTTGCCTGGTTaGGAGGAGATGCCCGCCTTGCCCGGCCGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: LHTTVPLGELPG*EEMPALPGRAQ
Trigger: CTGGGCCCGGCCGGGCAAGGCGGGCATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377735.7
CDS CCA 72 bp ATGGCTTCACACCACTGTGCCACTCGGGGAGTTGCCTaGTTGGGAGGAGATGCCCGCCTTGCCCGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: MASHHCATRGVA*LGGDARLARPG
Trigger: GCCCGGCCGGGCAAGGCGGGCATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377735.7
CDS GCA 72 bp CCACCGCCCACTTGGCCAGCGGGTTGCGGGGTGCCTTaGTCTTGGCAGCATAGACAGAGAAGCCCTCGCCCT +
Preference number: 6 (lower is better)
Translates to: PPPTWPAGCGVP*SWQHRQRSPRP
Trigger: AGGGCGAGGGCTTCTCTGTCTATGCTGCCAAGAGCAAGGCACCCCGCAACCCGCTGGCCAAGTGGGCGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CCA 72 bp ATGGAGTCGAAGTGGAAGACGCGCAGGCAGCCATCCTaGCTCACACAGGCCAGGTGCCGGCCATCGGGCGAG +
Preference number: 6 (lower is better)
Translates to: MESKWKTRRQPS*LTQARCRPSGE
Trigger: CTCGCCCGATGGCCGGCACCTGGCCTGTGTGAGCCAGGATGGCTGCCTGCGCGTCTTCCACTTCGACTCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CCA 72 bp TTGCCCGGCCGGGCCCAGGTGCAGATGAGGCCCTCCTaGCAGGCAGTGATGATGCAGTCCTCCAGGAACAGG +
Preference number: 6 (lower is better)
Translates to: LPGRAQVQMRPS*QAVMMQSSRNR
Trigger: CCTGTTCCTGGAGGACTGCATCATCACTGCCTGCCAGGAGGGCCTCATCTGCACCTGGGCCCGGCCGGGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000602829.1
CDS GCA 72 bp CTCACCCACCGCCCACTTGGCCAGCGGGTTGCGGGGTaGCTTGCTCTTGGCAGCATAGACAGAGAAGCCCTC +
Preference number: 6 (lower is better)
Translates to: LTHRPLGQRVAG*LALGSIDREAL
Trigger: GAGGGCTTCTCTGTCTATGCTGCCAAGAGCAAGGCACCCCGCAACCCGCTGGCCAAGTGGGCGGTGGGTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS GCA 72 bp CTCCCCATCAGCACCGGCTGCTGTCGCCGCCTCCTCTaGCCTTGTGGTGTAGGGGTCAAAGGCCACAGCGTT +
Preference number: 6 (lower is better)
Translates to: LPISTGCCRRLL*PCGVGVKGHSV
Trigger: AACGCTGTGGCCTTTGACCCCTACACCACAAGGGCAGAGGAGGCGGCGACAGCAGCCGGTGCTGATGGGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CCA 72 bp CCCACTTGGCCAGCGGGTTGCGGGGTGCCTTGCTCTTaGCAGCATAGACAGAGAAGCCCTCGCCCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: PTWPAGCGVPCS*QHRQRSPRPAS
Trigger: TGAAGCAGGGCGAGGGCTTCTCTGTCTATGCTGCCAAGAGCAAGGCACCCCGCAACCCGCTGGCCAAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CAA 72 bp TATCCATGGCTTCACACCACTGTGCCACTCGGGGAGTaGCCTGGTTGGGAGGAGATGCCCGCCTTGCCCGGC +
Preference number: 6 (lower is better)
Translates to: YPWLHTTVPLGE*PGWEEMPALPG
Trigger: GCCGGGCAAGGCGGGCATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCCATGGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377735.7
CDS CCA 72 bp CAGTCCTCCAGGAACAGGAGGACTGTGAGCCGCTCCTaGGCGATCTTCTTGCACACAAGGGGCTCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: QSSRNRRTVSRS*AIFLHTRGSSR
Trigger: CCTGCTGGAGCCCCTTGTGTGCAAGAAGATCGCCCAGGAGCGGCTCACAGTCCTCCTGTTCCTGGAGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000602829.1
CDS CAA 90 bp GGGGCCCGATATCCATGGCTTCACACCACTGTGCCACTCGGGGAGTaGCCTGGTTGGGAGGAGATGCCCTCTACCACTGACTTGCTGGGT +
Preference number: 6 (lower is better)
Translates to: GARYPWLHTTVPLGE*PGWEEMPSTTDLLG
Trigger: ACCCAGCAAGTCAGTGGTAGAGGGCATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCCATGGATATCGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270223.7
CDS TCA 72 bp GCTGACGTTGTACAGGTACAGGTGGCCACTGGCGTGTaGTGCCAGGAACAGGCTCTCCGACTCAGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: ADVVQVQVATGV*CQEQALRLRQP
Trigger: TGGCTGCCTGAGTCGGAGAGCCTGTTCCTGGCATCACACGCCAGTGGCCACCTGTACCTGTACAACGTCAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS GCA 72 bp TGGGGAAACAGAGGCTGCTGCAAGGTGGCCACAGGGTaGTCCAAGGAGCCTCGATGTCCCATCTTTGGCGAG +
Preference number: 6 (lower is better)
Translates to: WGNRGCCKVATG*SKEPRCPIFGE
Trigger: CTCGCCAAAGATGGGACATCGAGGCTCCTTGGAGCACCCTGTGGCCACCTTGCAGCAGCCTCTGTTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601370.1
CDS CCA 72 bp ACCAGCAGCGAGATGGTCTCGGTGGCAGCAGTGAACTaGTTGAAATCGTGGCAGGTGGGCTGGGTGCCCTTG +
Preference number: 6 (lower is better)
Translates to: TSSEMVSVAAVN*LKSWQVGWVPL
Trigger: CAAGGGCACCCAGCCCACCTGCCACGATTTCAACCAGTTCACTGCTGCCACCGAGACCATCTCGCTGCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000598237.1
ENST00000601370.1
CDS CAA 90 bp CCAAGGAGCCTCGATGTCCCATCTTTGGCGAGGGGACAGTCCTGCTaGCCACAGAATTGTCCTGTATCTCGGGGTCCTCAACCTCCGGGC +
Preference number: 6 (lower is better)
Translates to: PRSLDVPSLARGQSC*PQNCPVSRGPQPPG
Trigger: GCCCGGAGGTTGAGGACCCCGAGATACAGGACAATTCTGTGGCAAGCAGGACTGTCCCCTCGCCAAAGATGGGACATCGAGGCTCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601370.1
CDS GCA 72 bp TTCCTAGCTGGCTCTCACACCCACCCCTCTTTCTGCTaGCTGCTGCCTAGGGCTAGACCCCCTCACTCTAAG +
Preference number: 6 (lower is better)
Translates to: FLAGSHTHPSFC*LLPRARPPHSK
Trigger: CTTAGAGTGAGGGGGTCTAGCCCTAGGCAGCAGGCAGCAGAAAGAGGGGTGGGTGTGAGAGCCAGCTAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS GCA 72 bp CAATTCCTAGCTGGCTCTCACACCCACCCCTCTTTCTaGTGCCTGCTGCCTAGGGCTAGACCCCCTCACTCT +
Preference number: 6 (lower is better)
Translates to: QFLAGSHTHPSF*CLLPRARPPHS
Trigger: AGAGTGAGGGGGTCTAGCCCTAGGCAGCAGGCAGCAGAAAGAGGGGTGGGTGTGAGAGCCAGCTAGGAATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602829.1
CDS CCA 72 bp CTTCACACCACTGTGCCACTCGGGGAGTTGCCTGGTTaGGAGGAGATGCCCTCTACCACTGACTTGCTGGGT +
Preference number: 6 (lower is better)
Translates to: LHTTVPLGELPG*EEMPSTTDLLG
Trigger: ACCCAGCAAGTCAGTGGTAGAGGGCATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270223.7
CDS CAA 90 bp CGATGTCCCATCTTTGGCGAGGGGACAGTCCTGCTTGCCACAGAATaGTCCTGTATCTCGGGGTCCTCAACCTCCGGGCCATGGAACAGT +
Preference number: 6 (lower is better)
Translates to: RCPIFGEGTVLLATE*SCISGSSTSGPWNS
Trigger: ACTGTTCCATGGCCCGGAGGTTGAGGACCCCGAGATACAGGACAATTCTGTGGCAAGCAGGACTGTCCCCTCGCCAAAGATGGGACATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601370.1
CDS CAA 90 bp GCAAGGTGGCCACAGGGTGCTCCAAGGAGCCTCGATGTCCCATCTTaGGCGAGGGGACAGTCCTGCTTGCCACAGAATTGTCCTGTATCT +
Preference number: 6 (lower is better)
Translates to: ARWPQGAPRSLDVPS*ARGQSCLPQNCPVS
Trigger: AGATACAGGACAATTCTGTGGCAAGCAGGACTGTCCCCTCGCCAAAGATGGGACATCGAGGCTCCTTGGAGCACCCTGTGGCCACCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601370.1
CDS CCA 72 bp GGTGGGCTGGGTGCCCTTGTAGATCCGCTTGTCAATTaGCTTGTTGAGGTCAATGGACCGTTGGCTCCCACG +
Preference number: 6 (lower is better)
Translates to: GGLGALVDPLVN*LVEVNGPLAPT
Trigger: CGTGGGAGCCAACGGTCCATTGACCTCAACAAGCCAATTGACAAGCGGATCTACAAGGGCACCCAGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000598237.1
ENST00000601370.1
CDS CCA 72 bp CACAGGGTGCTCCAAGGAGCCTCGATGTCCCATCTTTaGCGAGGGGACAGTCCTGCTTGCCACAGAATTGTC +
Preference number: 6 (lower is better)
Translates to: HRVLQGASMSHL*RGDSPACHRIV
Trigger: GACAATTCTGTGGCAAGCAGGACTGTCCCCTCGCCAAAGATGGGACATCGAGGCTCCTTGGAGCACCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601370.1
CDS CAA 72 bp TATCCATGGCTTCACACCACTGTGCCACTCGGGGAGTaGCCTGGTTGGGAGGAGATGCCCTCTACCACTGAC +
Preference number: 6 (lower is better)
Translates to: YPWLHTTVPLGE*PGWEEMPSTTD
Trigger: GTCAGTGGTAGAGGGCATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGAAGCCATGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270223.7
CDS CAA 72 bp ATCTTTGGCGAGGGGACAGTCCTGCTTGCCACAGAATaGTCCTGTATCTCGGGGTCCTCAACCTCCGGGCCA +
Preference number: 6 (lower is better)
Translates to: IFGEGTVLLATE*SCISGSSTSGP
Trigger: TGGCCCGGAGGTTGAGGACCCCGAGATACAGGACAATTCTGTGGCAAGCAGGACTGTCCCCTCGCCAAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601370.1
CDS CAA 72 bp CCACAGGGTGCTCCAAGGAGCCTCGATGTCCCATCTTaGGCGAGGGGACAGTCCTGCTTGCCACAGAATTGT +
Preference number: 6 (lower is better)
Translates to: PQGAPRSLDVPS*ARGQSCLPQNC
Trigger: ACAATTCTGTGGCAAGCAGGACTGTCCCCTCGCCAAAGATGGGACATCGAGGCTCCTTGGAGCACCCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601370.1
CDS TCA 72 bp GGGTGCCCTTGTAGATCCGCTTGTCAATTGGCTTGTTaGGGTCAATGGACCGTTGGCTCCCACGACGACAGC +
Preference number: 6 (lower is better)
Translates to: GCPCRSACQLAC*GQWTVGSHDDS
Trigger: GCTGTCGTCGTGGGAGCCAACGGTCCATTGACCTCAACAAGCCAATTGACAAGCGGATCTACAAGGGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000598237.1
ENST00000601370.1
CDS GCA 72 bp AGCCTCGATGTCCCATCTTTGGCGAGGGGACAGTCCTaGTTGCCACAGAATTGTCCTGTATCTCGGGGTCCT +
Preference number: 6 (lower is better)
Translates to: SLDVPSLARGQS*LPQNCPVSRGP
Trigger: AGGACCCCGAGATACAGGACAATTCTGTGGCAAGCAGGACTGTCCCCTCGCCAAAGATGGGACATCGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601370.1
CDS GCA 72 bp CAGGGCCTGGGTACAGTAAAGGCAGCTGTCATTAGCTaGTGTCACCCCATTCTCCATCTCTCCCTGGTCCTG +
Preference number: 6 (lower is better)
Translates to: QGLGTVKAAVIS*CHPILHLSLVL
Trigger: CAGGACCAGGGAGAGATGGAGAATGGGGTGACAGCAGCTAATGACAGCTGCCTTTACTGTACCCAGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598237.1
CDS CCA 72 bp GTCAATGGACCGTTGGCTCCCACGACGACAGCAGCCTaGGTAGAAATAGAGCTCACGGCCCAAGTTGAAGCA +
Preference number: 6 (lower is better)
Translates to: VNGPLAPTTTAA*VEIELTAQVEA
Trigger: TGCTTCAACTTGGGCCGTGAGCTCTATTTCTACCCAGGCTGCTGTCGTCGTGGGAGCCAACGGTCCATTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000598237.1
ENST00000601370.1
CDS CCA 72 bp GAGCTCCCTTCTAACTTGGGAGGGACCCTGAGGTGCTaGGGAAAGAACTCAGGGACAGTCCTACCTCTACCA +
Preference number: 6 (lower is better)
Translates to: ELPSNLGGTLRC*GKNSGTVLPLP
Trigger: TGGTAGAGGTAGGACTGTCCCTGAGTTCTTTCCCCAGCACCTCAGGGTCCCTCCCAAGTTAGAAGGGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537879.1
CDS TCA 72 bp CTGGTGTCCTTTTTGATGAGATCCAGGTACTGCACTTaGCCCGCTGAGAAGCCCACCAGCAGCGAGATGGTC +
Preference number: 6 (lower is better)
Translates to: LVSFLMRSRYCT*PAEKPTSSEMV
Trigger: GACCATCTCGCTGCTGGTGGGCTTCTCAGCGGGTCAAGTGCAGTACCTGGATCTCATCAAAAAGGACACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270223.7
ENST00000377735.7
ENST00000597053.1
ENST00000598237.1
ENST00000601370.1
CDS GCA 72 bp TCGATGTCCCATCTTTGGCGAGGGGACAGTCCTGCTTaGCACAGAATTGTCCTGTATCTCGGGGTCCTCAAC +
Preference number: 6 (lower is better)
Translates to: SMSHLWRGDSPA*HRIVLYLGVLN
Trigger: GTTGAGGACCCCGAGATACAGGACAATTCTGTGGCAAGCAGGACTGTCCCCTCGCCAAAGATGGGACATCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601370.1
CDS GCA 72 bp ACCAGAGAGAATGAGACAGAAGCCAAGAGCAGTCCCTaGCCGCGGATAAGGTCGTTTACTGGTATCTCCTCG +
Preference number: 6 (lower is better)
Translates to: TRENETEAKSSP*PRIRSFTGISS
Trigger: CGAGGAGATACCAGTAAACGACCTTATCCGCGGGCAGGGACTGCTCTTGGCTTCTGTCTCATTCTCTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597053.1
CDS CAA 72 bp CTCTCCGACTCAGGCAGCCACTTCAGATATGTCACCTaGGTCTTGTCGATCAACCGCTCCTCATTGAACAGC +
Preference number: 6 (lower is better)
Translates to: LSDSGSHFRYVT*VLSINRSSLNS
Trigger: GCTGTTCAATGAGGAGCGGTTGATCGACAAGACCAAGGTGACATATCTGAAGTGGCTGCCTGAGTCGGAGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CAA 72 bp GACTCAGGCAGCCACTTCAGATATGTCACCTTGGTCTaGTCGATCAACCGCTCCTCATTGAACAGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: DSGSHFRYVTLV*SINRSSLNSLL
Trigger: CAGCAAGCTGTTCAATGAGGAGCGGTTGATCGACAAGACCAAGGTGACATATCTGAAGTGGCTGCCTGAGTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270223.7
ENST00000377735.7
CDS CAA 90 bp TCACCTTCCCAAAGTCACATGATGAGTAAATGGTGCAGCAGGGCTTaGAATCCAAAGCCTCCAGAGCCCAGAACTCAAAGAGCAAGGGCA +
Preference number: 6 (lower is better)
Translates to: SPSQSHMMSKWCSRA*NPKPPEPRTQRARA
Trigger: TGCCCTTGCTCTTTGAGTTCTGGGCTCTGGAGGCTTTGGATTCAAAGCCCTGCTGCACCATTTACTCATCATGTGACTTTGGGAAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602469.1
CDS CCA 72 bp GAATGGTCACCTTCCCAAAGTCACATGATGAGTAAATaGTGCAGCAGGGCTTTGAATCCAAAGCCTCCAGAG +
Preference number: 6 (lower is better)
Translates to: EWSPSQSHMMSK*CSRALNPKPPE
Trigger: CTCTGGAGGCTTTGGATTCAAAGCCCTGCTGCACCATTTACTCATCATGTGACTTTGGGAAGGTGACCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602469.1
CDS CCA 72 bp TATGATTCTACAACAGCGGTCCTGCAAGGTAGGAACTaGAATCCCATTTTGCAGAGGAGGAGAAGTGAGGCT +
Preference number: 6 (lower is better)
Translates to: YDSTTAVLQGRN*NPILQRRRSEA
Trigger: AGCCTCACTTCTCCTCCTCTGCAAAATGGGATTCCAGTTCCTACCTTGCAGGACCGCTGTTGTAGAATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602469.1
CDS CAA 90 bp ACTGAGCAATCTCCATGTATGATTCTACAACAGCGGTCCTCCTCATaGAACAGCTTGCTGGTGTCCTTTTTGATGAGATCCAGGTACTGC +
Preference number: 6 (lower is better)
Translates to: TEQSPCMILQQRSSS*NSLLVSFLMRSRYC
Trigger: GCAGTACCTGGATCTCATCAAAAAGGACACCAGCAAGCTGTTCAATGAGGAGGACCGCTGTTGTAGAATCATACATGGAGATTGCTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597053.1
CDS CAA 72 bp CAAAGTCACATGATGAGTAAATGGTGCAGCAGGGCTTaGAATCCAAAGCCTCCAGAGCCCAGAACTCAAAGA +
Preference number: 6 (lower is better)
Translates to: QSHMMSKWCSRA*NPKPPEPRTQR
Trigger: TCTTTGAGTTCTGGGCTCTGGAGGCTTTGGATTCAAAGCCCTGCTGCACCATTTACTCATCATGTGACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602469.1
CDS CCA 72 bp TCACTCATTCTGAGAATATTTATGGAACACCTCCTCTaGACCAGAGAGAATGAGACAGAAGCCAAGAGCAGT +
Preference number: 6 (lower is better)
Translates to: SLILRIFMEHLL*TRENETEAKSS
Trigger: ACTGCTCTTGGCTTCTGTCTCATTCTCTCTGGTCCAGAGGAGGTGTTCCATAAATATTCTCAGAATGAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597053.1