RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DMTF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000135164

Ensembl transcript IDs: ENST00000331242.12, ENST00000394703.9, ENST00000412139.6, ENST00000413276.6, ENST00000414630.6, ENST00000420131.5, ENST00000423590.6, ENST00000425406.5, ENST00000425705.2, ENST00000428819.5, ENST00000430405.7, ENST00000432366.6, ENST00000432937.6, ENST00000434534.5, ENST00000446796.6, ENST00000447863.5, ENST00000448598.5, ENST00000449088.7, ENST00000453049.5, ENST00000454008.6, ENST00000473521.5, ENST00000480982.5, ENST00000488352.2, ENST00000547146.6, ENST00000578926.1, ENST00000579592.5, ENST00000579677.5, ENST00000579850.5, ENST00000580010.1, ENST00000580710.5, ENST00000582887.1, ENST00000582925.5, ENST00000583833.1, ENST00000584457.5, ENST00000584619.5

Found 1204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTaGCTATGTCACCTGGCTCAGTGCTTGTCAACTCATGAACCACTT +
Preference number: 1 (lower is better)
Translates to: GYRLVQPQLPKTHPV*LCHLAQCLSTHEPL
Trigger: AAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR GCA 90 bp GAGTTAGGGGAAGGCCTTGGCTTGAGCTTGTTTGAAGTAGGTAGGTaGCTGGAGTGCCAGTGGGCTGTAGATGGAAAGAGGGAAGAATCT +
Preference number: 1 (lower is better)
Translates to: ELGEGLGLSLFEVGR*LECQWAVDGKREES
Trigger: AGATTCTTCCCTCTTTCCATCTACAGCCCACTGGCACTCCAGGCACCTACCTACTTCAAACAAGCTCAAGCCAAGGCCTTCCCCTAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR GCA 90 bp GCACTTCTTCCTAGCGCCGCCCCTATTGTTGCCCAGTCATTGCCATaGTTTATCCGGAGCCTAAAACAAGAGTCTGCCAATCAGCATTTG +
Preference number: 1 (lower is better)
Translates to: ALLPSAAPIVAQSLP*FIRSLKQESANQHL
Trigger: CAAATGCTGATTGGCAGACTCTTGTTTTAGGCTCCGGATAAAGCATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAGGAAGAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR CCA 90 bp TTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCACCTaGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCAAGTCTCTT +
Preference number: 1 (lower is better)
Translates to: FSHSCPRHTLCDYVT*LSACQLMNHFCKSL
Trigger: AAGAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR TCA 90 bp TTTCCAATTCAGGTAGTTGAGCCATTTAGAACGACATTGCTTTTCTaGGCGGGTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACC +
Preference number: 1 (lower is better)
Translates to: FPIQVVEPFRTTLLF*AGTDSFSHSCPRHT
Trigger: GGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTACCCGCTCAGAAAAGCAATGTCGTTCTAAATGGCTCAACTACCTGAATTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR GCA 90 bp GCAGGAGAGTCTGCTGAAGAAACATGGGTGATCTGGACTGGAATCTaGAATGCTGCCATGGGGCTAGAAGAGATGGCTGTATTATCTTCC +
Preference number: 1 (lower is better)
Translates to: AGESAEETWVIWTGI*NAAMGLEEMAVLSS
Trigger: GGAAGATAATACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCACCCATGTTTCTTCAGCAGACTCTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR TCA 90 bp GTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAGATGACTaGATATCACTATCGACTGTCAGTTCTGCTTGGGATATGGAAGAA +
Preference number: 1 (lower is better)
Translates to: VSASRASGGSGKSDD*ISLSTVSSAWDMEE
Trigger: TTCTTCCATATCCCAAGCAGAACTGACAGTCGATAGTGATATTCAGTCATCTGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR TCA 90 bp CACCATCAGGGAACGAAACATCCTTATGGTTTGCAATTTGCCTTTTaGTGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACAC +
Preference number: 1 (lower is better)
Translates to: HHQGTKHPYGLQFAF*WSTIYFVAIVVNGH
Trigger: GTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCCCTGATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425406.5
3UTR TCA 90 bp CTGAAGCAGGGAACGAAACATCCTTATGGTTTGCAATTTGCCTTTTaGTGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACAC +
Preference number: 1 (lower is better)
Translates to: LKQGTKHPYGLQFAF*WSTIYFVAIVVNGH
Trigger: GTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCCCTGCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584619.5
3UTR GCA 90 bp GACAGACCACCATCAGGGAACGAAACATCCTTATGGTTTGCAATTTaGCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAA +
Preference number: 1 (lower is better)
Translates to: DRPPSGNETSLWFAI*LLMVHHLLRSHCGE
Trigger: TTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCCCTGATGGTGGTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425406.5
3UTR GCA 90 bp GAGTCTGCTGAAGCAGGGAACGAAACATCCTTATGGTTTGCAATTTaGCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAA +
Preference number: 1 (lower is better)
Translates to: ESAEAGNETSLWFAI*LLMVHHLLRSHCGE
Trigger: TTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCCCTGCTTCAGCAGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584619.5
3UTR TCA 90 bp TTAAGACAGGGAACGAAACATCCTTATGGTTTGCAATTTGCCTTTTaGTGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACAC +
Preference number: 1 (lower is better)
Translates to: LRQGTKHPYGLQFAF*WSTIYFVAIVVNGH
Trigger: GTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCCCTGTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR TCA 90 bp CTAGAAGAGATGGCTGTATTATCTTCCAAGCGGGCAACTCTTATCTaGACATGCTGCACACTGGAATTGGTATTACTGTTTGGAACTCCA +
Preference number: 1 (lower is better)
Translates to: LEEMAVLSSKRATLI*TCCTLELVLLFGTP
Trigger: TGGAGTTCCAAACAGTAATACCAATTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGATAATACAGCCATCTCTTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR CCA 90 bp GGAAGAAGTGATGTCCTCTGTGGCAACAGTCTGAATGATGACTCTTaGTGTGTGACACTGCACTGTAACATTATCACTTGTGTTCAACAA +
Preference number: 1 (lower is better)
Translates to: GRSDVLCGNSLNDDS*CVTLHCNIITCVQQ
Trigger: TTGTTGAACACAAGTGATAATGTTACAGTGCAGTGTCACACACCAAGAGTCATCATTCAGACTGTTGCCACAGAGGACATCACTTCTTCC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR CCA 90 bp CTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTGGAATTaGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCTCCAAAA +
Preference number: 1 (lower is better)
Translates to: LPSGQLLSEHAAHWN*YYCLELQILIYSPK
Trigger: TTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAATTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR TCA 90 bp CATCCTTTGAATCTTCTGAAACAGGACTGCCCAAGGATGATCCAATaGTATTTGATTCTTCCTGATGATGTTGGAGTATGGGATCTGTTA +
Preference number: 1 (lower is better)
Translates to: HPLNLLKQDCPRMIQ*YLILPDDVGVWDLL
Trigger: TAACAGATCCCATACTCCAACATCATCAGGAAGAATCAAATATCATTGGATCATCCTTGGGCAGTCCTGTTTCAGAAGATTCAAAGGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR GCA 90 bp CCTTTTATTAAGACAGGGAACGAAACATCCTTATGGTTTGCAATTTaGCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAA +
Preference number: 1 (lower is better)
Translates to: PFIKTGNETSLWFAI*LLMVHHLLRSHCGE
Trigger: TTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCCCTGTCTTAATAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR CCA 90 bp TATTATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTaGAATTGGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCT +
Preference number: 1 (lower is better)
Translates to: YYLPSGQLLSEHAAH*NWYYCLELQILIYS
Trigger: AGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAATTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGATAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR TCA 90 bp TGTGCTATTTTGGTCACTGAATTTGGATACATGAGCATCATTAAATaGTGGCTCCACAGTCATCTTAGGGTGATGAATTTCATCTGGGAA +
Preference number: 1 (lower is better)
Translates to: CAILVTEFGYMSIIK*WLHSHLRVMNFIWE
Trigger: TTCCCAGATGAAATTCATCACCCTAAGATGACTGTGGAGCCATCATTTAATGATGCTCATGTATCCAAATTCAGTGACCAAAATAGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR GCA 90 bp GTGAATGAAATTCCTTATTCCCATGTAACACTAAACAGGGATTTATaGTTAAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAA +
Preference number: 1 (lower is better)
Translates to: VNEIPYSHVTLNRDL*LKLPASTQLHTVIK
Trigger: TTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGAATTTCATTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR TCA 90 bp AGATTCAGTATCTATAACATCAGATGCCTGGATAAAGCCATGTGGTaGAGGAACGATAAGTATTGTTTCATCATCAATTGTTTGATCAAC +
Preference number: 1 (lower is better)
Translates to: RFSIYNIRCLDKAMW*RNDKYCFIINCLIN
Trigger: GTTGATCAAACAATTGATGATGAAACAATACTTATCGTTCCTTCACCACATGGCTTTATCCAGGCATCTGATGTTATAGATACTGAATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp AGGAGAAGCAGGAGCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTTGCCTGGAGTGCCAGTaGGCTGTAGATGGAAAGAGG +
Preference number: 2 (lower is better)
Translates to: RRSRSSSCQGYCGTSSQSCLECQ*AVDGKR
Trigger: CCTCTTTCCATCTACAGCCCACTGGCACTCCAGGCA...ACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGCTCCTGCTTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp GTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCATTGTTGCCCAGTCATTaGCATGCTTTATCCGGAGCC +
Preference number: 2 (lower is better)
Translates to: VPTRSATAAQDTPCVTMSLLPSH*HALSGA
Trigger: GGCTCCGGATAAAGCATGGCAATGACTGGGCAACAA...TGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR GCA 90 bp GGTGATGAATTTCATCTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGCGCCGCCCCTATTGTTaGCCAGTCATTGCCATGCTT +
Preference number: 2 (lower is better)
Translates to: GDEFHLGKCLLLGRLEAQRRPYC*PVIAML
Trigger: AAGCATGGCAATGACTGGGCAACAATAGGGGCGGCG...CTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAATTCATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR GCA 90 bp GGTGATGAATTTCATCTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGTCGTTCAGCCACAGCTaGCCAAGACACACCCTGTGT +
Preference number: 2 (lower is better)
Translates to: GDEFHLGKCLLLGRLEAQSFSHS*PRHTLC
Trigger: ACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGA...CTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAATTCATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR TCA 90 bp GTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCAGTGCTTGTCAACTCATaGACCACTTCTGCAAGTCTC +
Preference number: 2 (lower is better)
Translates to: VPTRSATAAQDTPCVTMSVLVNS*TTSASL
Trigger: GAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCAC...TGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR GCA 90 bp TCTTCTTCTGTCCACTTCCCTGTGTTGCAAGTATCCTTCATCAGTCGGCACCGACGCCGCCCCTATTGTTaGCCAGTCATTGCCATGCTT +
Preference number: 2 (lower is better)
Translates to: SSSVHFPVLQVSFISRHRRRPYC*PVIAML
Trigger: AAGCATGGCAATGACTGGGCAACAATAGGGGCGGCG...TCGGTGCCGACTGATGAAGGATACTTGCAACACAGGGAAGTGGACAGAAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR TCA 90 bp GCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTTAGGGGAAGGCCTTTGAAAAGACTCATCTaGACTACAACCAGGCTTGAG +
Preference number: 2 (lower is better)
Translates to: AAAVRVTVGLAVRVRGRPLKRLI*TTTRLE
Trigger: CTCAAGCCTGGTTGTAGTTCAGATGAGTCTTTTCAA...AGGCCTTCCCCTAACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp GTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTATTGTTGCCCAGTCATTaGCATGCTTTATCCGGAGCC +
Preference number: 2 (lower is better)
Translates to: VIWTGICNAAMGLEEMAVLLPSH*HALSGA
Trigger: GGCTCCGGATAAAGCATGGCAATGACTGGGCAACAA...TACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTATGGGTGATCTGGACTaGAATCTGCAATGCTGCCAT +
Preference number: 2 (lower is better)
Translates to: APTASNGLTKCTTTRPPPMGDLD*NLQCCH
Trigger: ATGGCAGCATTGCAGATTCCAGTCCAGATCACCCAT...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp GTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAGAAACATGGGTGATCTGGAACTACAACCAGGCTTaGGAGGAGACAGTGCCATGT +
Preference number: 2 (lower is better)
Translates to: VSESTVAGESAEETWVIWNYNQA*EETVPC
Trigger: ACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTT...CCAGATCACCCATGTTTCTTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp ATTTCATCTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAACGACATTGCTTTTCTaGGCGGGTACCGACTCGTTC +
Preference number: 2 (lower is better)
Translates to: ISSGKVSASRASGGSGKSTTLLF*AGTDSF
Trigger: GAACGAGTCGGTACCCGCTCAGAAAAGCAATGTCGT...TGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR GCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 2 (lower is better)
Translates to: APTASNGLTKCTTTRPPPKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp CCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAAACTACAACCAGGCTTaGGAGGAGACAGTGCCATGT +
Preference number: 2 (lower is better)
Translates to: PPQDHLLGLYTCMLVKSQNYNQA*EETVPC
Trigger: ACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTT...TTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp CCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGAAACTACAACCAGGCTTaGGAGGAGACAGTGCCATGT +
Preference number: 2 (lower is better)
Translates to: PKSAPTASNGLTKCTTTRNYNQA*EETVPC
Trigger: ACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTT...TCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp CTATCGACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAAACTACAACCAGGCTTaGGAGGAGACAGTGCCATGT +
Preference number: 2 (lower is better)
Translates to: LSTVSSAWDMEEVMSSVANYNQA*EETVPC
Trigger: ACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTT...TGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTCGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp GTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCAACAGTGTGCCTTCTTTaGTTGAACTGCCTATTTCTA +
Preference number: 2 (lower is better)
Translates to: VPTRSATAAQDTPCVTMSTVCLL*LNCLFL
Trigger: TAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGT...TGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR GCA 90 bp CTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAGATGACTAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 2 (lower is better)
Translates to: LGKCLLLGRLEAQENQMTKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...AGTCATCTGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp GACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTTTGTTGCCCAGTCATTaGCATGCTTTATCCGGAGCC +
Preference number: 2 (lower is better)
Translates to: DCQFCLGYGRSDVLCGNSLLPSH*HALSGA
Trigger: GGCTCCGGATAAAGCATGGCAATGACTGGGCAACAA...ACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR GCA 90 bp TTCAGTACCCCCACTCTGTTTCCAATTCAGGTAGTTGAGCCATTTAGAACGACACGCCGCCCCTATTGTTaGCCAGTCATTGCCATGCTT +
Preference number: 2 (lower is better)
Translates to: FSTPTLFPIQVVEPFRTTRRPYC*PVIAML
Trigger: AAGCATGGCAATGACTGGGCAACAATAGGGGCGGCG...TGTCGTTCTAAATGGCTCAACTACCTGAATTGGAAACAGAGTGGGGGTACTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR GCA 90 bp CTATCGACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAGACTGGAATCTGCAATaGTGCCATGGGGCTAGAAGA +
Preference number: 2 (lower is better)
Translates to: LSTVSSAWDMEEVMSSVADWNLQ*CHGARR
Trigger: TCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC...TGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTCGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp ACCAAATCTTCGACATCCTTTGAATCTTCTGAAACAGGACTGCCCAAGGATGATGGTAGGTGCCTGGAGTaGCAGTGGGCTGTAGATGGA +
Preference number: 2 (lower is better)
Translates to: TKSSTSFESSETGLPKDDGRCLE*QWAVDG
Trigger: TCCATCTACAGCCCACTGGCACTCCAGGCACCTACC...ATCATCCTTGGGCAGTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACAACTACAACCAGGCTTaGGAGGAGACAGTGCCATGT +
Preference number: 2 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNNYNQA*EETVPC
Trigger: ACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTT...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAACACACTAAGTGGATaGCAAACTATTCTCTCGGTA +
Preference number: 2 (lower is better)
Translates to: APTASNGLTKCTTTRPPPNTLSG*QTILSV
Trigger: TACCGAGAGAATAGTTTGTCATCCACTTAGTGTGTT...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACGTCGGCACCGATCTTTaGCAGAAGATGCACTTCTTC +
Preference number: 2 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYVGTDL*QKMHFF
Trigger: GAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGAC...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR TCA 90 bp GCAATTTGCCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGGTCGGCACCGATCTTTaGCAGAAGATGCACTTCTTC +
Preference number: 2 (lower is better)
Translates to: AICLLMVHHLLRSHCGERVGTDL*QKMHFF
Trigger: GAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGAC...CCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR TCA 90 bp ATTATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTGGAATTGGTACGACATTGCTTTTCTaGGCGGGTACCGACTCGTTC +
Preference number: 2 (lower is better)
Translates to: IIFQAGNSYLNMLHTGIGTTLLF*AGTDSF
Trigger: GAACGAGTCGGTACCCGCTCAGAAAAGCAATGTCGT...ACCAATTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR TCA 90 bp GCACTGGCTAAATCAGAGGGTGATTCCTCTTGTTTAAGGTCGGTGTCAGAGATTGGGATATGGAAGAAGTaGTGTCCTCTGTGGCAACAG +
Preference number: 2 (lower is better)
Translates to: ALAKSEGDSSCLRSVSEIGIWKK*CPLWQQ
Trigger: CTGTTGCCACAGAGGACATCACTTCTTCCATATCCC...AATCTCTGACACCGACCTTAAACAAGAGGAATCACCCTCTGATTTAGCCAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTGGAAAATCAGATGACTaGATATCACTATCGACTGTC +
Preference number: 2 (lower is better)
Translates to: APTASNGLTKCTTTRPPPGKSDD*ISLSTV
Trigger: GACAGTCGATAGTGATATTCAGTCATCTGATTTTCC...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp ACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 2 (lower is better)
Translates to: TASNGLTKCTTTRPPPRSKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...AGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp AGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCAATTCCGCCGCCCCTATTGTTaGCCAGTCATTGCCATGCTT +
Preference number: 2 (lower is better)
Translates to: RLISSSLVHSVPPLCFQFRRPYC*PVIAML
Trigger: AAGCATGGCAATGACTGGGCAACAATAGGGGCGGCG...GAATTGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR GCA 90 bp ATTTCATCTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCATGTCACCTGGCTCAGTaGTTGTCAACTCATGAACCA +
Preference number: 2 (lower is better)
Translates to: ISSGKVSASRASGGSGKSCHLAQ*LSTHEP
Trigger: TGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACA...TGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR GCA 90 bp AGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCAATTCTCGTTCAGCCACAGCTaGCCAAGACACACCCTGTGT +
Preference number: 2 (lower is better)
Translates to: RLISSSLVHSVPPLCFQFSFSHS*PRHTLC
Trigger: ACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGA...GAATTGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR GCA 90 bp TGTCAAAGGCAAGACAGATTCAGTATCTATAACATCAGATGCCTGGATAAAGCCGGTAGGTGCCTGGAGTaGCAGTGGGCTGTAGATGGA +
Preference number: 2 (lower is better)
Translates to: CQRQDRFSIYNIRCLDKAGRCLE*QWAVDG
Trigger: TCCATCTACAGCCCACTGGCACTCCAGGCACCTACC...GGCTTTATCCAGGCATCTGATGTTATAGATACTGAATCTGTCTTGCCTTTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCGGTAGGTGCCTGGAGTaGCAGTGGGCTGTAGATGGA +
Preference number: 2 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLGRCLE*QWAVDG
Trigger: TCCATCTACAGCCCACTGGCACTCCAGGCACCTACC...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp ATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCCAGCAACAATGTGTGTaGCTTAAGGACTGTGGCTAT +
Preference number: 2 (lower is better)
Translates to: MVHHLLRSHCGERTLLHPQQQCV*LKDCGY
Trigger: ATAGCCACAGTCCTTAAGCCACACACATTGTTGCTG...GGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR-3UTR CCA 90 bp ATTTCATCTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCATGTGACTATGTCACCTaGCTCAGTGCTTGTCAACTC +
Preference number: 2 (lower is better)
Translates to: ISSGKVSASRASGGSGKSCDYVT*LSACQL
Trigger: GAGTTGACAAGCACTGAGCCAGGTGACATAGTCACA...TGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CCA 90 bp GTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTAGCTGCACACTGGAATTaGTATTACTGTTTGGAACTC +
Preference number: 2 (lower is better)
Translates to: VIWTGICNAAMGLEEMAVAAHWN*YYCLEL
Trigger: GAGTTCCAAACAGTAATACCAATTCCAGTGTGCAGC...TACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR-3UTR TCA 90 bp AGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCAATTCACGACATTGCTTTTCTaGGCGGGTACCGACTCGTTC +
Preference number: 2 (lower is better)
Translates to: RLISSSLVHSVPPLCFQFTTLLF*AGTDSF
Trigger: GAACGAGTCGGTACCCGCTCAGAAAAGCAATGTCGT...GAATTGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR GCA 90 bp CCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGAAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 2 (lower is better)
Translates to: PKSAPTASNGLTKCTTTRKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...TCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp ACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 2 (lower is better)
Translates to: TTTRPPPRSLYLYAGQVSKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...TGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp GACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTATTATCTTCAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 2 (lower is better)
Translates to: DWNLQCCHGARRDGCIIFKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...GAAGATAATACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp GACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCATTTAGAACGACATTaGTTTTCTGAGCGGGTACCG +
Preference number: 2 (lower is better)
Translates to: DCQFCLGYGRSDVLCGNSHLERH*FSERVP
Trigger: CGGTACCCGCTCAGAAAAGCAATGTCGTTCTAAATG...ACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CCA 90 bp CCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACAGCAACAATGTGTGTaGCTTAAGGACTGTGGCTAT +
Preference number: 2 (lower is better)
Translates to: PKSAPTASNGLTKCTTTRQQQCV*LKDCGY
Trigger: ATAGCCACAGTCCTTAAGCCACACACATTGTTGCTG...TCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTCTGCTTAGATTCTGGTaGGTTTTGTTACTATGCTTA +
Preference number: 2 (lower is better)
Translates to: APTASNGLTKCTTTRPPPLLRFW*VLLLCL
Trigger: TAAGCATAGTAACAAAACCCACCAGAATCTAAGCAG...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp GTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAGAAACATGGGTGATCTGGGCTGCACACTGGAATTaGTATTACTGTTTGGAACTC +
Preference number: 2 (lower is better)
Translates to: VSESTVAGESAEETWVIWAAHWN*YYCLEL
Trigger: GAGTTCCAAACAGTAATACCAATTCCAGTGTGCAGC...CCAGATCACCCATGTTTCTTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR CAA 90 bp CCACCATCAGGGAACGAAACATCCTTATGGTTTGCAATTTGCCTTTaGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACA +
Preference number: 2 (lower is better)
Translates to: PPSGNETSLWFAICL*MVHHLLRSHCGERT
Trigger: TGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCCCTGATGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425406.5
3UTR CAA 90 bp GCTGAAGCAGGGAACGAAACATCCTTATGGTTTGCAATTTGCCTTTaGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACA +
Preference number: 2 (lower is better)
Translates to: AEAGNETSLWFAICL*MVHHLLRSHCGERT
Trigger: TGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCCCTGCTTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584619.5
3UTR-3UTR TCA 90 bp CCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAAGACAGTGCCATGTCTaGTCTTTAGAGAAACTGTAC +
Preference number: 2 (lower is better)
Translates to: PPQDHLLGLYTCMLVKSQRQCHV*SLEKLY
Trigger: GTACAGTTTCTCTAAAGATCAGACATGGCACTGTCT...TTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp ACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAGACAGTGCCATGTCTaGTCTTTAGAGAAACTGTAC +
Preference number: 2 (lower is better)
Translates to: TTTRPPPRSLYLYAGQVSRQCHV*SLEKLY
Trigger: GTACAGTTTCTCTAAAGATCAGACATGGCACTGTCT...TGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp ACCAAATCTTCGACATCCTTTGAATCTTCTGAAACAGGACTGCCCAAGGATGATAACTACAACCAGGCTTaGGAGGAGACAGTGCCATGT +
Preference number: 2 (lower is better)
Translates to: TKSSTSFESSETGLPKDDNYNQA*EETVPC
Trigger: ACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTT...ATCATCCTTGGGCAGTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp GCAATTTGCCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 2 (lower is better)
Translates to: AICLLMVHHLLRSHCGERKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...CCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR-3UTR GCA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 2 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp GTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGCGCCGCCCCTATTGTTaGCCAGTCATTGCCATGCTT +
Preference number: 2 (lower is better)
Translates to: VSILVCWSSLKLSLLEDQRRPYC*PVIAML
Trigger: AAGCATGGCAATGACTGGGCAACAATAGGGGCGGCG...CTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR GCA 90 bp TTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCTGAATGATTGTCACCTGGCTCAGTaGTTGTCAACTCATGAACCA +
Preference number: 2 (lower is better)
Translates to: FCLGYGRSDVLCGNSLNDCHLAQ*LSTHEP
Trigger: TGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACA...ATCATTCAGACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR GCA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGATCTGGACTGGAATCTaGAATGCTGCCATGGGGCTA +
Preference number: 2 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMIWTGI*NAAMGL
Trigger: TAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGAT...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp CAGTCAGAGTTAGGGGAAGGCCTTGGCTTGAGCTTGTTTGAAGTAGGTAGGTGCCTGCTTAGATTCTGGTaGGTTTTGTTACTATGCTTA +
Preference number: 2 (lower is better)
Translates to: QSELGEGLGLSLFEVGRCLLRFW*VLLLCL
Trigger: TAAGCATAGTAACAAAACCCACCAGAATCTAAGCAG...GCACCTACCTACTTCAAACAAGCTCAAGCCAAGGCCTTCCCCTAACTCTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp GCACTGGCTAAATCAGAGGGTGATTCCTCTTGTTTAAGGTCGGTGTCAGAGATTAGACAGTGCCATGTCTaGTCTTTAGAGAAACTGTAC +
Preference number: 2 (lower is better)
Translates to: ALAKSEGDSSCLRSVSEIRQCHV*SLEKLY
Trigger: GTACAGTTTCTCTAAAGATCAGACATGGCACTGTCT...AATCTCTGACACCGACCTTAAACAAGAGGAATCACCCTCTGATTTAGCCAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp TGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCAACTACAACCAGGCTTaGGAGGAGACAGTGCCATGT +
Preference number: 2 (lower is better)
Translates to: WSSLKLSLLEDQKITGKLNYNQA*EETVPC
Trigger: ACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTT...GAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp TGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAGATGACTGAATATCACTCTGGGGATAAAGCATaGACAATAATCTGTTCAGGA +
Preference number: 2 (lower is better)
Translates to: CLLLGRLEAQENQMTEYHSGDKA*TIICSG
Trigger: TCCTGAACAGATTATTGTTCATGCTTTATCCCCAGA...GTGATATTCAGTCATCTGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp CTATCGACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCATCTGGGGATAAAGCATaGACAATAATCTGTTCAGGA +
Preference number: 2 (lower is better)
Translates to: LSTVSSAWDMEEVMSSVASGDKA*TIICSG
Trigger: TCCTGAACAGATTATTGTTCATGCTTTATCCCCAGA...TGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTCGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp GCACTGGCTAAATCAGAGGGTGATTCCTCTTGTTTAAGGTCGGTGTCAGAGATTATGACTCTTGGTGTGTaGCACTGCACTGTAACATTA +
Preference number: 2 (lower is better)
Translates to: ALAKSEGDSSCLRSVSEIMTLGV*HCTVTL
Trigger: TAATGTTACAGTGCAGTGTCACACACCAAGAGTCAT...AATCTCTGACACCGACCTTAAACAAGAGGAATCACCCTCTGATTTAGCCAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp TGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCAAGTCTCTTTTCTTCTTCAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 2 (lower is better)
Translates to: WLSACQLMNHFCKSLFFFKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...GAAGAAGAAAAGAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR GCA 90 bp CATTGTGGTGAACGGACACTACTCCATCCCTCAGCTAACAGATCCCAGTTAATGCCTAAAACAAGAGTCTaGCAATCAGCATTTGGTTCA +
Preference number: 2 (lower is better)
Translates to: HCGERTLLHPSANRSQLMPKTRV*QSAFGS
Trigger: TGAACCAAATGCTGATTGGCAGACTCTTGTTTTAGG...CATTAACTGGGATCTGTTAGCTGAGGGATGGAGTAGTGTCCGTTCACCACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR GCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTTTGTTGCCCAGTCATTaGCATGCTTTATCCGGAGCC +
Preference number: 2 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTLLPSH*HALSGA
Trigger: GGCTCCGGATAAAGCATGGCAATGACTGGGCAACAA...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR GCA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATCATTTAGAACGACATTaGTTTTCTGAGCGGGTACCG +
Preference number: 2 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYHLERH*FSERVP
Trigger: CGGTACCCGCTCAGAAAAGCAATGTCGTTCTAAATG...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CCA 90 bp CTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAGAATCCCACTGCCAGCAATaGGTTAACCAAATGTACCAC +
Preference number: 2 (lower is better)
Translates to: LFSVIVSESTVAGESAEESHCQQ*VNQMYH
Trigger: GTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGA...TTCTTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp GTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAGAAACATGGGTGATCTGGCTGCTTAGATTCTGGTaGGTTTTGTTACTATGCTTA +
Preference number: 2 (lower is better)
Translates to: VSESTVAGESAEETWVIWLLRFW*VLLLCL
Trigger: TAAGCATAGTAACAAAACCCACCAGAATCTAAGCAG...CCAGATCACCCATGTTTCTTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp TTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTTGTGACTATGTCACCTaGCTCAGTGCTTGTCAACTC +
Preference number: 2 (lower is better)
Translates to: LTKCTTTRPPPRSLYLYACDYVT*LSACQL
Trigger: GAGTTGACAAGCACTGAGCCAGGTGACATAGTCACA...AGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CCA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTATGTGACTATGTCACCTaGCTCAGTGCTTGTCAACTC +
Preference number: 2 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLCDYVT*LSACQL
Trigger: GAGTTGACAAGCACTGAGCCAGGTGACATAGTCACA...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR TCA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATTTGAAAAGACTCATCTaGACTACAACCAGGCTTGAG +
Preference number: 2 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYLKRLI*TTTRLE
Trigger: CTCAAGCCTGGTTGTAGTTCAGATGAGTCTTTTCAA...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp ATTTGCCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACATTGAAAAGACTCATCTaGACTACAACCAGGCTTGAG +
Preference number: 2 (lower is better)
Translates to: ICLLMVHHLLRSHCGERTLKRLI*TTTRLE
Trigger: CTCAAGCCTGGTTGTAGTTCAGATGAGTCTTTTCAA...TGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR-3UTR TCA 90 bp CCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGTCGGCACCGATCTTTaGCAGAAGATGCACTTCTTC +
Preference number: 2 (lower is better)
Translates to: PQQLSFRDSKLFLVAEVNVGTDL*QKMHFF
Trigger: GAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGAC...ATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR TCA 90 bp CTGGAATTGGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCTCCAAAAGCGTCGGCACCGATCTTTaGCAGAAGATGCACTTCTTC +
Preference number: 2 (lower is better)
Translates to: LELVLLFGTPDPDLFSKSVGTDL*QKMHFF
Trigger: GAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGAC...GCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAATTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR TCA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGGTGCTTGTCAACTCATaGACCACTTCTGCAAGTCTC +
Preference number: 2 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKVLVNS*TTSASL
Trigger: GAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCAC...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR TCA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATACGACATTGCTTTTCTaGGCGGGTACCGACTCGTTC +
Preference number: 2 (lower is better)
Translates to: EVVINSVPSLLELPISKNTTLLF*AGTDSF
Trigger: GAACGAGTCGGTACCCGCTCAGAAAAGCAATGTCGT...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR TCA 90 bp GCACTGGCTAAATCAGAGGGTGATTCCTCTTGTTTAAGGTCGGTGTCAGAGATTGGAAAATCAGATGACTaGATATCACTATCGACTGTC +
Preference number: 2 (lower is better)
Translates to: ALAKSEGDSSCLRSVSEIGKSDD*ISLSTV
Trigger: GACAGTCGATAGTGATATTCAGTCATCTGATTTTCC...AATCTCTGACACCGACCTTAAACAAGAGGAATCACCCTCTGATTTAGCCAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACACAGTGTGCCTTCTTTaGTTGAACTGCCTATTTCTA +
Preference number: 2 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNTVCLL*LNCLFL
Trigger: TAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGT...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp TGTCAAAGGCAAGACAGATTCAGTATCTATAACATCAGATGCCTGGATAAAGCCTGTCACCTGGCTCAGTaGTTGTCAACTCATGAACCA +
Preference number: 2 (lower is better)
Translates to: CQRQDRFSIYNIRCLDKACHLAQ*LSTHEP
Trigger: TGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACA...GGCTTTATCCAGGCATCTGATGTTATAGATACTGAATCTGTCTTGCCTTTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR GCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTTGGAATCTGCAATGCTaGCATGGGGCTAGAAGAGAT +
Preference number: 2 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTWNLQC*HGARRD
Trigger: ATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCA...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp AGTCTGAATGATGACTCTTGGTGTGTGACACTGCACTGTAACATTATCACTTGTTCCCACTGCCAGCAATaGGTTAACCAAATGTACCAC +
Preference number: 2 (lower is better)
Translates to: SLNDDSWCVTLHCNIITCSHCQQ*VNQMYH
Trigger: GTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGA...ACAAGTGATAATGTTACAGTGCAGTGTCACACACCAAGAGTCATCATTCAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCATGGGTGATCTGGACTaGAATCTGCAATGCTGCCAT +
Preference number: 2 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLMGDLD*NLQCCH
Trigger: ATGGCAGCATTGCAGATTCCAGTCCAGATCACCCAT...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp ACCAAATCTTCGACATCCTTTGAATCTTCTGAAACAGGACTGCCCAAGGATGATGAAACATGGGTGATCTaGACTGGAATCTGCAATGCT +
Preference number: 2 (lower is better)
Translates to: TKSSTSFESSETGLPKDDETWVI*TGICNA
Trigger: AGCATTGCAGATTCCAGTCCAGATCACCCATGTTTC...ATCATCCTTGGGCAGTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCCAGTGGGCTGTAGATaGAAAGAGGGAAGAATCTCA +
Preference number: 2 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTPVGCR*KEGRIS
Trigger: TGAGATTCTTCCCTCTTTCCATCTACAGCCCACTGG...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR CAA 90 bp ATTAAGACAGGGAACGAAACATCCTTATGGTTTGCAATTTGCCTTTaGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACA +
Preference number: 2 (lower is better)
Translates to: IKTGNETSLWFAICL*MVHHLLRSHCGERT
Trigger: TGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCCCTGTCTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR-3UTR TCA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGAGACAGTGCCATGTCTaGTCTTTAGAGAAACTGTAC +
Preference number: 2 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMRQCHV*SLEKLY
Trigger: GTACAGTTTCTCTAAAGATCAGACATGGCACTGTCT...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATAACTACAACCAGGCTTaGGAGGAGACAGTGCCATGT +
Preference number: 2 (lower is better)
Translates to: EVVINSVPSLLELPISKNNYNQA*EETVPC
Trigger: ACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTT...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGTTGAAAAGACTCATCTaGACTACAACCAGGCTTGAG +
Preference number: 2 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMLKRLI*TTTRLE
Trigger: CTCAAGCCTGGTTGTAGTTCAGATGAGTCTTTTCAA...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTATTGAAAAGACTCATCTaGACTACAACCAGGCTTGAG +
Preference number: 2 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLLKRLI*TTTRLE
Trigger: CTCAAGCCTGGTTGTAGTTCAGATGAGTCTTTTCAA...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp TGTCAAAGGCAAGACAGATTCAGTATCTATAACATCAGATGCCTGGATAAAGCCAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 2 (lower is better)
Translates to: CQRQDRFSIYNIRCLDKAKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...GGCTTTATCCAGGCATCTGATGTTATAGATACTGAATCTGTCTTGCCTTTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp TGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCAAGTCTCTTTTCTTCTTCCCTAAAACAAGAGTCTaGCAATCAGCATTTGGTTCA +
Preference number: 2 (lower is better)
Translates to: WLSACQLMNHFCKSLFFFPKTRV*QSAFGS
Trigger: TGAACCAAATGCTGATTGGCAGACTCTTGTTTTAGG...GAAGAAGAAAAGAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR GCA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATAGCTACATCAAGTTCTaGTATCCTGAGGATGAGATT +
Preference number: 2 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYSYIKF*YPEDEI
Trigger: AATCTCATCCTCAGGATAGCAGAACTTGATGTAGCT...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR GCA 90 bp TCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGGACTGGAATCTGCAATaGTGCCATGGGGCTAGAAGA +
Preference number: 2 (lower is better)
Translates to: SYFFEEVVINSVPSLLELDWNLQ*CHGARR
Trigger: TCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC...CAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAAATCTGGACTGGAATCTaGAATGCTGCCATGGGGCTA +
Preference number: 2 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNEIWTGI*NAAMGL
Trigger: TAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGAT...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp TGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCCAGCAACAATGTGTGTaGCTTAAGGACTGTGGCTAT +
Preference number: 2 (lower is better)
Translates to: WSSLKLSLLEDQKITGKLQQQCV*LKDCGY
Trigger: ATAGCCACAGTCCTTAAGCCACACACATTGTTGCTG...GAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGCAGCAACAATGTGTGTaGCTTAAGGACTGTGGCTAT +
Preference number: 2 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKQQQCV*LKDCGY
Trigger: ATAGCCACAGTCCTTAAGCCACACACATTGTTGCTG...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp CTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTTCCCACTGCCAGCAATaGGTTAACCAAATGTACCAC +
Preference number: 2 (lower is better)
Translates to: LVCWSSLKLSLLEDQKITSHCQQ*VNQMYH
Trigger: GTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGA...AGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp TGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCGAAACATGGGTGATCTaGACTGGAATCTGCAATGCT +
Preference number: 2 (lower is better)
Translates to: WSSLKLSLLEDQKITGKLETWVI*TGICNA
Trigger: AGCATTGCAGATTCCAGTCCAGATCACCCATGTTTC...GAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCTCTGCTGAAGAAACATaGGTGATCTGGACTGGAATC +
Preference number: 2 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLSAEET*VIWTGI
Trigger: GATTCCAGTCCAGATCACCCATGTTTCTTCAGCAGA...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR CAA 90 bp TTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTaGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGA +
Preference number: 2 (lower is better)
Translates to: LTKCTTTRPPPRSLY*YAGQVSNLVFLKIR
Trigger: TCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR CAA 90 bp CAACTCTTATCTGAACATGCTGCACACTGGAATTGGTATTACTGTTaGGAACTCCAGATCCTGATTTATTCTCCAAAAGCGTTGGGTTGT +
Preference number: 2 (lower is better)
Translates to: QLLSEHAAHWNWYYC*ELQILIYSPKALGC
Trigger: ACAACCCAACGCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAATTCCAGTGTGCAGCATGTTCAGATAAGAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR-3UTR TCA 90 bp GTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTAGACCAAGACAGTGCCATGTCTaGTCTTTAGAGAAACTGTAC +
Preference number: 2 (lower is better)
Translates to: VSNLVFLKIRRSLVSSRPRQCHV*SLEKLY
Trigger: GTACAGTTTCTCTAAAGATCAGACATGGCACTGTCT...TGGTCTAGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp TTAAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATTGAAAAGACTCATCTaGACTACAACCAGGCTTGAG +
Preference number: 2 (lower is better)
Translates to: LKLPASTQLHTVIKLNLRLKRLI*TTTRLE
Trigger: CTCAAGCCTGGTTGTAGTTCAGATGAGTCTTTTCAA...TCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp ATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGATTTCATCGTGCTTGTCAACTCATaGACCACTTCTGCAAGTCTC +
Preference number: 2 (lower is better)
Translates to: IFISYIKFCYPEDEIDFIVLVNS*TTSASL
Trigger: GAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCAC...GATGAAATCAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR TCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAACTGAAGAAACATGGGTaGTCTGGACTGGAATCTGCA +
Preference number: 2 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNELKKHG*SGLESA
Trigger: TGCAGATTCCAGTCCAGATCACCCATGTTTCTTCAG...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAACAGTGTGCCTTCTTTaGTTGAACTGCCTATTTCTA +
Preference number: 2 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLTVCLL*LNCLFL
Trigger: TAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGT...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp AGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCAATTCACAGTGTGCCTTCTTTaGTTGAACTGCCTATTTCTA +
Preference number: 2 (lower is better)
Translates to: RLISSSLVHSVPPLCFQFTVCLL*LNCLFL
Trigger: TAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGT...GAATTGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR GCA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGCCTAAAACAAGAGTCTaGCAATCAGCATTTGGTTCA +
Preference number: 2 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMPKTRV*QSAFGS
Trigger: TGAACCAAATGCTGATTGGCAGACTCTTGTTTTAGG...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR GCA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATTGGAATCTGCAATGCTaGCATGGGGCTAGAAGAGAT +
Preference number: 2 (lower is better)
Translates to: EVVINSVPSLLELPISKNWNLQC*HGARRD
Trigger: ATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCA...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCATCGACTGTCAGTTCTaGTTGGGATATGGAAGAAGT +
Preference number: 2 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLIDCQF*LGYGRS
Trigger: ACTTCTTCCATATCCCAAGCAGAACTGACAGTCGAT...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp GAGGGAAGAATCTCAAATGTCTGTAGTGTTCCACTGTTTAGTGTTATTGTTTCTTGTGACTATGTCACCTaGCTCAGTGCTTGTCAACTC +
Preference number: 2 (lower is better)
Translates to: EGRISNVCSVPLFSVIVSCDYVT*LSACQL
Trigger: GAGTTGACAAGCACTGAGCCAGGTGACATAGTCACA...AGAAACAATAACACTAAACAGTGGAACACTACAGACATTTGAGATTCTTCCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CCA 90 bp TCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCAGTGGGCTGTAGATaGAAAGAGGGAAGAATCTCA +
Preference number: 2 (lower is better)
Translates to: SYFFEEVVINSVPSLLELPVGCR*KEGRIS
Trigger: TGAGATTCTTCCCTCTTTCCATCTACAGCCCACTGG...CAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp GCACTGGCTAAATCAGAGGGTGATTCCTCTTGTTTAAGGTCGGTGTCAGAGATTAGTTCTGTGCTATTTTaGTCACTGAATTTGGATACA +
Preference number: 2 (lower is better)
Translates to: ALAKSEGDSSCLRSVSEISSVLF*SLNLDT
Trigger: TGTATCCAAATTCAGTGACCAAAATAGCACAGAACT...AATCTCTGACACCGACCTTAAACAAGAGGAATCACCCTCTGATTTAGCCAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp TTAAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGAAACACACTAAGTGGATaGCAAACTATTCTCTCGGTA +
Preference number: 2 (lower is better)
Translates to: LKLPASTQLHTVIKLNLRNTLSG*QTILSV
Trigger: TACCGAGAGAATAGTTTGTCATCCACTTAGTGTGTT...TCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR TCA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGTGCTTGTCAACTCATaGACCACTTCTGCAAGTCTC +
Preference number: 2 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVVLVNS*TTSASL
Trigger: GAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCAC...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR GCA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGGTCTCTATACTTGTATaGTGGTCAAGTCTCAAACTT +
Preference number: 2 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMVSILV*WSSLKL
Trigger: AAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp ATTATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTGGAATTGGTAACATCCTTATGGTTTaGAATTTGCCTTTTGATGGT +
Preference number: 2 (lower is better)
Translates to: IIFQAGNSYLNMLHTGIGNILMV*NLPFDG
Trigger: ACCATCAAAAGGCAAATTGCAAACCATAAGGATGTT...ACCAATTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR-3UTR GCA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCATCTATAACATCAGATaGCTGGATAAAGCCATGTGG +
Preference number: 2 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLIYNIR*LDKAMW
Trigger: CCACATGGCTTTATCCAGGCATCTGATGTTATAGAT...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAACAGCAACAATGTGTGTaGCTTAAGGACTGTGGCTAT +
Preference number: 2 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNEQQQCV*LKDCGY
Trigger: ATAGCCACAGTCCTTAAGCCACACACATTGTTGCTG...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp ACCAAATCTTCGACATCCTTTGAATCTTCTGAAACAGGACTGCCCAAGGATGATCTGCTTAGATTCTGGTaGGTTTTGTTACTATGCTTA +
Preference number: 2 (lower is better)
Translates to: TKSSTSFESSETGLPKDDLLRFW*VLLLCL
Trigger: TAAGCATAGTAACAAAACCCACCAGAATCTAAGCAG...ATCATCCTTGGGCAGTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CCA 90 bp TTAAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGAGAACATGCTGCACACTaGAATTGGTATTACTGTTTG +
Preference number: 2 (lower is better)
Translates to: LKLPASTQLHTVIKLNLREHAAH*NWYYCL
Trigger: CAAACAGTAATACCAATTCCAGTGTGCAGCATGTTC...TCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR-3UTR GCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTTTATGGTTTGCAATTTaGCTTTTGATGGTCCACCAT +
Preference number: 2 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTLWFAI*LLMVHH
Trigger: ATGGTGGACCATCAAAAGGCAAATTGCAAACCATAA...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR-3UTR TCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAATCTGGGGATAAAGCATaGACAATAATCTGTTCAGGA +
Preference number: 2 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNESGDKA*TIICSG
Trigger: TCCTGAACAGATTATTGTTCATGCTTTATCCCCAGA...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp TCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGACAGTGTGCCTTCTTTaGTTGAACTGCCTATTTCTA +
Preference number: 2 (lower is better)
Translates to: SYFFEEVVINSVPSLLELTVCLL*LNCLFL
Trigger: TAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGT...CAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR GCA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATAGCTACATCAAGTTCTaGTATCCTGAGGATGAGATT +
Preference number: 2 (lower is better)
Translates to: EVVINSVPSLLELPISKNSYIKF*YPEDEI
Trigger: AATCTCATCCTCAGGATAGCAGAACTTGATGTAGCT...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR GCA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGCCTAAAACAAGAGTCTaGCAATCAGCATTTGGTTCA +
Preference number: 2 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVPKTRV*QSAFGS
Trigger: TGAACCAAATGCTGATTGGCAGACTCTTGTTTTAGG...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CAA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTGCGCCGCCCCTATTGTaGCCCAGTCATTGCCATGCT +
Preference number: 3 (lower is better)
Translates to: APTASNGLTKCTTTRPPPAPPLL*PSHCHA
Trigger: AGCATGGCAATGACTGGGCAACAATAGGGGCGGCGC...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CAA 90 bp TCTGAGCGGGTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGAGTCGGCACCGATCTTaGACAGAAGATGCACTTCTT +
Preference number: 3 (lower is better)
Translates to: SERVPTRSATAAQDTPCVSRHRS*TEDALL
Trigger: AAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACT...CACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTACCCGCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR CAA 90 bp TCTGAGCGGGTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGGGTAAATTAAGCCTCTaGGGGGTTGCTCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: SERVPTRSATAAQDTPCVGKLSL*GVAPIS
Trigger: AGAAATAGGAGCAACCCCCAAGAGGCTTAATTTACC...CACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTACCCGCTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR TCA 72 bp CTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTaGCTATGTCACCTGGCTCAGTGCTTGTCAACTCAT +
Preference number: 3 (lower is better)
Translates to: LVQPQLPKTHPV*LCHLAQCLSTH
Trigger: ATGAGTTGACAAGCACTGAGCCAGGTGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR CAA 90 bp GACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTGCGCCGCCCCTATTGTaGCCCAGTCATTGCCATGCT +
Preference number: 3 (lower is better)
Translates to: DCQFCLGYGRSDVLCGNSAPPLL*PSHCHA
Trigger: AGCATGGCAATGACTGGGCAACAATAGGGGCGGCGC...ACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CAA 90 bp CATTGTGGTGAACGGACACTACTCCATCCCTCAGCTAACAGATCCCAGTTAATGGCGCCGCCCCTATTGTaGCCCAGTCATTGCCATGCT +
Preference number: 3 (lower is better)
Translates to: HCGERTLLHPSANRSQLMAPPLL*PSHCHA
Trigger: AGCATGGCAATGACTGGGCAACAATAGGGGCGGCGC...CATTAACTGGGATCTGTTAGCTGAGGGATGGAGTAGTGTCCGTTCACCACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR CAA 90 bp ATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCCTAGCGCCGCCCCTATaGTTGCCCAGTCATTGCCAT +
Preference number: 3 (lower is better)
Translates to: MVHHLLRSHCGERTLLHPLAPPL*LPSHCH
Trigger: ATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAG...GGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR TCA 72 bp CAGGTAGTTGAGCCATTTAGAACGACATTGCTTTTCTaGGCGGGTACCGACTCGTTCAGCCACAGCTGCCCA +
Preference number: 3 (lower is better)
Translates to: QVVEPFRTTLLF*AGTDSFSHSCP
Trigger: TGGGCAGCTGTGGCTGAACGAGTCGGTACCCGCTCAGAAAAGCAATGTCGTTCTAAATGGCTCAACTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR CCA 72 bp AGCTGCCCAAGACACACCCTGTGTGACTATGTCACCTaGCTCAGTGCTTGTCAACTCATGAACCACTTCTGC +
Preference number: 3 (lower is better)
Translates to: SCPRHTLCDYVT*LSACQLMNHFC
Trigger: GCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACATAGTCACACAGGGTGTGTCTTGGGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR CAA 90 bp ACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCACCTCTGCCAATCAGCATTaGGTTCAATTGTTTTCTCCC +
Preference number: 3 (lower is better)
Translates to: TDSFSHSCPRHTLCDYVTSANQH*VQLFSP
Trigger: GGGAGAAAACAATTGAACCAAATGCTGATTGGCAGA...GGTGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR CAA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACCTAGCGCCGCCCCTATaGTTGCCCAGTCATTGCCAT +
Preference number: 3 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNLAPPL*LPSHCH
Trigger: ATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAG...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CAA 90 bp ATTTCATCTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAGAACTACAACCAGGCTaGAGAGGAGACAGTGCCATG +
Preference number: 3 (lower is better)
Translates to: ISSGKVSASRASGGSGKSELQPG*RGDSAM
Trigger: CATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTC...TGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp ATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCATTGTTGCCCAGTCATaGCCATGCTTTATCCGGAGC +
Preference number: 3 (lower is better)
Translates to: MVHHLLRSHCGERTLLHPIVAQS*PCFIRS
Trigger: GCTCCGGATAAAGCATGGCAATGACTGGGCAACAAT...GGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR CAA 90 bp ATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCAATTCAGGCGCCGCCCCTATTGTaGCCCAGTCATTGCCATGCT +
Preference number: 3 (lower is better)
Translates to: IDFIFLGPFSTPTLFPIQAPPLL*PSHCHA
Trigger: AGCATGGCAATGACTGGGCAACAATAGGGGCGGCGC...CTGAATTGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR GCA 72 bp TCTGCTGAAGAAACATGGGTGATCTGGACTGGAATCTaGAATGCTGCCATGGGGCTAGAAGAGATGGCTGTA +
Preference number: 3 (lower is better)
Translates to: SAEETWVIWTGI*NAAMGLEEMAV
Trigger: TACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCACCCATGTTTCTTCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACGAACTACAACCAGGCTaGAGAGGAGACAGTGCCATG +
Preference number: 3 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYELQPG*RGDSAM
Trigger: CATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTC...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGCTAGCGCCGCCCCTATaGTTGCCCAGTCATTGCCAT +
Preference number: 3 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMLAPPL*LPSHCH
Trigger: ATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAG...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CAA 90 bp GTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTAAACAGTGTGCCTTCTTaGCTTGAACTGCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: VIWTGICNAAMGLEEMAVNSVPS*LELPIS
Trigger: AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTT...TACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp TGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTGGTAAATTAAGCCTCTaGGGGGTTGCTCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: WSTIYFVAIVVNGHYSIPGKLSL*GVAPIS
Trigger: AGAAATAGGAGCAACCCCCAAGAGGCTTAATTTACC...AGGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR-3UTR CAA 90 bp ACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCCTAGGTCTCTATACTaGTATGCTGGTCAAGTCTCA +
Preference number: 3 (lower is better)
Translates to: TASNGLTKCTTTRPPPRSPRSLY*YAGQVS
Trigger: TGAGACTTGACCAGCATACAAGTATAGAGACCTAGG...AGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp GTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTATCTGCCAATCAGCATTaGGTTCAATTGTTTTCTCCC +
Preference number: 3 (lower is better)
Translates to: VIWTGICNAAMGLEEMAVSANQH*VQLFSP
Trigger: GGGAGAAAACAATTGAACCAAATGCTGATTGGCAGA...TACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CAA 90 bp GCAATTTGCCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGCACCTGGCTCAGTGCTaGTCAACTCATGAACCACTT +
Preference number: 3 (lower is better)
Translates to: AICLLMVHHLLRSHCGERHLAQC*STHEPL
Trigger: AAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTG...CCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR CAA 90 bp TCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTCAGTTGATTTCATCTTCCTaGGTCCATTCAGTACCCCCA +
Preference number: 3 (lower is better)
Translates to: STIYFVAIVVNGHYSIPQLISSS*VHSVPP
Trigger: TGGGGGTACTGAATGGACCAAGGAAGATGAAATCAA...CTGAGGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR CAA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTGGTAAATTAAGCCTCTaGGGGGTTGCTCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCGKLSL*GVAPIS
Trigger: AGAAATAGGAGCAACCCCCAAGAGGCTTAATTTACC...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp ACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAGGTAAATTAAGCCTCTaGGGGGTTGCTCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: TTTRPPPRSLYLYAGQVSGKLSL*GVAPIS
Trigger: AGAAATAGGAGCAACCCCCAAGAGGCTTAATTTACC...TGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp CCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCTAGGTCTCTATACTaGTATGCTGGTCAAGTCTCA +
Preference number: 3 (lower is better)
Translates to: PKSAPTASNGLTKCTTTRPRSLY*YAGQVS
Trigger: TGAGACTTGACCAGCATACAAGTATAGAGACCTAGG...TCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp AGGATGAGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCATTGTTGCCCAGTCATaGCCATGCTTTATCCGGAGC +
Preference number: 3 (lower is better)
Translates to: RMRLISSSLVHSVPPLCFIVAQS*PCFIRS
Trigger: GCTCCGGATAAAGCATGGCAATGACTGGGCAACAAT...GAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCTCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR CAA 90 bp AATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGATGCGCCGCCCCTATTGTaGCCCAGTCATTGCCATGCT +
Preference number: 3 (lower is better)
Translates to: NVIFISYIKFCYPEDEIDAPPLL*PSHCHA
Trigger: AGCATGGCAATGACTGGGCAACAATAGGGGCGGCGC...ATCAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR CAA 90 bp GACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTTTGATTTCATCTTCCTaGGTCCATTCAGTACCCCCA +
Preference number: 3 (lower is better)
Translates to: DCQFCLGYGRSDVLCGNSLISSS*VHSVPP
Trigger: TGGGGGTACTGAATGGACCAAGGAAGATGAAATCAA...ACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR TCA 72 bp TCTAGGGCGTCTGGAGGCTCAGGAAAATCAGATGACTaGATATCACTATCGACTGTCAGTTCTGCTTGGGAT +
Preference number: 3 (lower is better)
Translates to: SRASGGSGKSDD*ISLSTVSSAWD
Trigger: ATCCCAAGCAGAACTGACAGTCGATAGTGATATTCAGTCATCTGATTTTCCTGAGCCTCCAGACGCCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR GCA 72 bp AGAAACATGGGTGATCTGGACTGGAATCTGCAATGCTaGCATGGGGCTAGAAGAGATGGCTGTATTATCTTC +
Preference number: 3 (lower is better)
Translates to: RNMGDLDWNLQC*HGARRDGCIIF
Trigger: GAAGATAATACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCACCCATGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR CCA 72 bp CCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTaGAATTGGTATTACTGTTTGGAACTCCAGATCCTG +
Preference number: 3 (lower is better)
Translates to: PSGQLLSEHAAH*NWYYCLELQIL
Trigger: CAGGATCTGGAGTTCCAAACAGTAATACCAATTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR-3UTR CAA 90 bp GACTCATCTGAACTACAACCAGGCTTGAGAGGAGACAGTGCCATGTCTGATCTTAACAGTGTGCCTTCTTaGCTTGAACTGCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: DSSELQPGLRGDSAMSDLNSVPS*LELPIS
Trigger: AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTT...AAGATCAGACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTCAGATGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp CTATCGACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAAACAGTGTGCCTTCTTaGCTTGAACTGCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: LSTVSSAWDMEEVMSSVANSVPS*LELPIS
Trigger: AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTT...TGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTCGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACGGTAAATTAAGCCTCTaGGGGGTTGCTCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYGKLSL*GVAPIS
Trigger: AGAAATAGGAGCAACCCCCAAGAGGCTTAATTTACC...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp TTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTCACCTGGCTCAGTGCTaGTCAACTCATGAACCACTT +
Preference number: 3 (lower is better)
Translates to: LTKCTTTRPPPRSLYLYAHLAQC*STHEPL
Trigger: AAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTG...AGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CAA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGATTTCATCTTCCTaGGTCCATTCAGTACCCCCA +
Preference number: 3 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYLISSS*VHSVPP
Trigger: TGGGGGTACTGAATGGACCAAGGAAGATGAAATCAA...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CAA 90 bp GCAATTTGCCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGTTGATTTCATCTTCCTaGGTCCATTCAGTACCCCCA +
Preference number: 3 (lower is better)
Translates to: AICLLMVHHLLRSHCGERLISSS*VHSVPP
Trigger: TGGGGGTACTGAATGGACCAAGGAAGATGAAATCAA...CCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR CAA 90 bp GACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTATTATCTTCCTTATGGTTTGCAATTaGCCTTTTGATGGTCCACCA +
Preference number: 3 (lower is better)
Translates to: DWNLQCCHGARRDGCIIFLMVCN*PFDGPP
Trigger: TGGTGGACCATCAAAAGGCAAATTGCAAACCATAAG...GAAGATAATACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR-3UTR CAA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACGTGTGCCTTCTTTGCTaGAACTGCCTATTTCTAAGA +
Preference number: 3 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYVCLLC*NCLFLR
Trigger: TCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACAC...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp ATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTGGAATTGGTATTGGTAAATTAAGCCTCTaGGGGGTTGCTCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: IFQAGNSYLNMLHTGIGIGKLSL*GVAPIS
Trigger: AGAAATAGGAGCAACCCCCAAGAGGCTTAATTTACC...AATACCAATTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR-3UTR CAA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGGTAAATTAAGCCTCTaGGGGGTTGCTCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYGKLSL*GVAPIS
Trigger: AGAAATAGGAGCAACCCCCAAGAGGCTTAATTTACC...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp CTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGAACTACAACCAGGCTaGAGAGGAGACAGTGCCATG +
Preference number: 3 (lower is better)
Translates to: LVCWSSLKLSLLEDQKITELQPG*RGDSAM
Trigger: CATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTC...AGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp ACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTTCAAACTTAGTCTTCTaGAAGATCAGAAGATCACTG +
Preference number: 3 (lower is better)
Translates to: TASNGLTKCTTTRPPPRSSNLVF*KIRRSL
Trigger: CAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGA...AGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTCTGCCAATCAGCATTaGGTTCAATTGTTTTCTCCC +
Preference number: 3 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYSANQH*VQLFSP
Trigger: GGGAGAAAACAATTGAACCAAATGCTGATTGGCAGA...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CAA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCATTGTTGCCCAGTCATaGCCATGCTTTATCCGGAGC +
Preference number: 3 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLIVAQS*PCFIRS
Trigger: GCTCCGGATAAAGCATGGCAATGACTGGGCAACAAT...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CAA 90 bp CTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAGAAAGTCGGCACCGATCTTaGACAGAAGATGCACTTCTT +
Preference number: 3 (lower is better)
Translates to: LFSVIVSESTVAGESAEESRHRS*TEDALL
Trigger: AAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACT...TTCTTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CAA 90 bp CCAGTTAATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGCACCTGGCTCAGTGCTaGTCAACTCATGAACCACTT +
Preference number: 3 (lower is better)
Translates to: PVNVIFISYIKFCYPEDEHLAQC*STHEPL
Trigger: AAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTG...CTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATTAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR CAA 90 bp GCACTGGCTAAATCAGAGGGTGATTCCTCTTGTTTAAGGTCGGTGTCAGAGATTCTTATGGTTTGCAATTaGCCTTTTGATGGTCCACCA +
Preference number: 3 (lower is better)
Translates to: ALAKSEGDSSCLRSVSEILMVCN*PFDGPP
Trigger: TGGTGGACCATCAAAAGGCAAATTGCAAACCATAAG...AATCTCTGACACCGACCTTAAACAAGAGGAATCACCCTCTGATTTAGCCAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR-3UTR CAA 90 bp GCACTGGCTAAATCAGAGGGTGATTCCTCTTGTTTAAGGTCGGTGTCAGAGATTTGCTGCACACTGGAATaGGTATTACTGTTTGGAACT +
Preference number: 3 (lower is better)
Translates to: ALAKSEGDSSCLRSVSEICCTLE*VLLFGT
Trigger: AGTTCCAAACAGTAATACCAATTCCAGTGTGCAGCA...AATCTCTGACACCGACCTTAAACAAGAGGAATCACCCTCTGATTTAGCCAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR-3UTR CAA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATAACAGTGTGCCTTCTTaGCTTGAACTGCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYNSVPS*LELPIS
Trigger: AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTT...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATGAACTACAACCAGGCTaGAGAGGAGACAGTGCCATG +
Preference number: 3 (lower is better)
Translates to: EVVINSVPSLLELPISKNELQPG*RGDSAM
Trigger: CATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTC...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp TCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGGAACTACAACCAGGCTaGAGAGGAGACAGTGCCATG +
Preference number: 3 (lower is better)
Translates to: SYFFEEVVINSVPSLLELELQPG*RGDSAM
Trigger: CATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTC...CAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp TGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAGATGACTGAATATCACTCAAACTTAGTCTTCTaGAAGATCAGAAGATCACTG +
Preference number: 3 (lower is better)
Translates to: CLLLGRLEAQENQMTEYHSNLVF*KIRRSL
Trigger: CAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGA...GTGATATTCAGTCATCTGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp CTATCGACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAAATTGGTATTACTGTTaGGAACTCCAGATCCTGATT +
Preference number: 3 (lower is better)
Translates to: LSTVSSAWDMEEVMSSVANWYYC*ELQILI
Trigger: AATCAGGATCTGGAGTTCCAAACAGTAATACCAATT...TGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTCGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR-3UTR CAA 90 bp GACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTATTATCTTCAATTGGTATTACTGTTaGGAACTCCAGATCCTGATT +
Preference number: 3 (lower is better)
Translates to: DWNLQCCHGARRDGCIIFNWYYC*ELQILI
Trigger: AATCAGGATCTGGAGTTCCAAACAGTAATACCAATT...GAAGATAATACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR TCA 72 bp CATGTTGAAAAGACTCATCTGAACTACAACCAGGCTTaGGAGGAGACAGTGCCATGTCTGATCTTTAGAGAA +
Preference number: 3 (lower is better)
Translates to: HVEKTHLNYNQA*EETVPCLIFRE
Trigger: TTCTCTAAAGATCAGACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTCAGATGAGTCTTTTCAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR TCA 72 bp GGAACGAAACATCCTTATGGTTTGCAATTTGCCTTTTaGTGGTCCACCATTTACTTCGTAGCCATTGTGGTG +
Preference number: 3 (lower is better)
Translates to: GTKHPYGLQFAF*WSTIYFVAIVV
Trigger: CACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR CAA 90 bp TTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGTGTGCCTTCTTTGCTaGAACTGCCTATTTCTAAGA +
Preference number: 3 (lower is better)
Translates to: LTKCTTTRPPPRSLYLYAVCLLC*NCLFLR
Trigger: TCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACAC...AGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp CCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACTGTGTGCCTTCTTTGCTaGAACTGCCTATTTCTAAGA +
Preference number: 3 (lower is better)
Translates to: PCNTKQGFMLKTPSLHSTVCLLC*NCLFLR
Trigger: TCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACAC...AGTTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp CCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACTAACAGTGTGCCTTCTTaGCTTGAACTGCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: PCNTKQGFMLKTPSLHSTNSVPS*LELPIS
Trigger: AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTT...AGTTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTGGTAAATTAAGCCTCTaGGGGGTTGCTCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTGKLSL*GVAPIS
Trigger: AGAAATAGGAGCAACCCCCAAGAGGCTTAATTTACC...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp CCAGTTAATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGGGTAAATTAAGCCTCTaGGGGGTTGCTCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: PVNVIFISYIKFCYPEDEGKLSL*GVAPIS
Trigger: AGAAATAGGAGCAACCCCCAAGAGGCTTAATTTACC...CTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATTAACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CAA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGAACTACAACCAGGCTaGAGAGGAGACAGTGCCATG +
Preference number: 3 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVELQPG*RGDSAM
Trigger: CATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTC...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCCTAGGTCTCTATACTaGTATGCTGGTCAAGTCTCA +
Preference number: 3 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLPRSLY*YAGQVS
Trigger: TGAGACTTGACCAGCATACAAGTATAGAGACCTAGG...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp AATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGATATTGTTGCCCAGTCATaGCCATGCTTTATCCGGAGC +
Preference number: 3 (lower is better)
Translates to: NVIFISYIKFCYPEDEIDIVAQS*PCFIRS
Trigger: GCTCCGGATAAAGCATGGCAATGACTGGGCAACAAT...ATCAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR CAA 90 bp CTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTAGTCGGCACCGATCTTaGACAGAAGATGCACTTCTT +
Preference number: 3 (lower is better)
Translates to: LVCWSSLKLSLLEDQKITSRHRS*TEDALL
Trigger: AAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACT...AGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CAA 90 bp GGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTTTGATTTCATCTTCCTaGGTCCATTCAGTACCCCCA +
Preference number: 3 (lower is better)
Translates to: GQVSNLVFLKIRRSLVSSLISSS*VHSVPP
Trigger: TGGGGGTACTGAATGGACCAAGGAAGATGAAATCAA...AGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR TCA 72 bp ATGGCTGTATTATCTTCCAAGCGGGCAACTCTTATCTaGACATGCTGCACACTGGAATTGGTATTACTGTTT +
Preference number: 3 (lower is better)
Translates to: MAVLSSKRATLI*TCCTLELVLLF
Trigger: AAACAGTAATACCAATTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGATAATACAGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR GCA 72 bp ATTGCCATGCTTTATCCGGAGCCTAAAACAAGAGTCTaGCAATCAGCATTTGGTTCAATTGTTTTCTCCCTT +
Preference number: 3 (lower is better)
Translates to: IAMLYPEPKTRV*QSAFGSIVFSL
Trigger: AAGGGAGAAAACAATTGAACCAAATGCTGATTGGCAGACTCTTGTTTTAGGCTCCGGATAAAGCATGGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR CAA 90 bp TGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCAACAGTGTGCCTTCTTaGCTTGAACTGCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: WSSLKLSLLEDQKITGKLNSVPS*LELPIS
Trigger: AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTT...GAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp TGTCAAAGGCAAGACAGATTCAGTATCTATAACATCAGATGCCTGGATAAAGCCAACAGTGTGCCTTCTTaGCTTGAACTGCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: CQRQDRFSIYNIRCLDKANSVPS*LELPIS
Trigger: AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTT...GGCTTTATCCAGGCATCTGATGTTATAGATACTGAATCTGTCTTGCCTTTGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATTCAAACTTAGTCTTCTaGAAGATCAGAAGATCACTG +
Preference number: 3 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYSNLVF*KIRRSL
Trigger: CAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGA...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATAGTCGGCACCGATCTTaGACAGAAGATGCACTTCTT +
Preference number: 3 (lower is better)
Translates to: EVVINSVPSLLELPISKNSRHRS*TEDALL
Trigger: AAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACT...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR-3UTR CAA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCTGGGATCTGTTAGTGTaGTCAAAGGCAAGACAGATT +
Preference number: 3 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLWDLLV*SKARQI
Trigger: AATCTGTCTTGCCTTTGACAACACTAACAGATCCCA...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp CTGGAATTGGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCTCCAAAAGCGTGTGCCTTCTTTGCTaGAACTGCCTATTTCTAAGA +
Preference number: 3 (lower is better)
Translates to: LELVLLFGTPDPDLFSKSVCLLC*NCLFLR
Trigger: TCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACAC...GCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAATTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR-3UTR CAA 90 bp CCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGTGTGCCTTCTTTGCTaGAACTGCCTATTTCTAAGA +
Preference number: 3 (lower is better)
Translates to: PQQLSFRDSKLFLVAEVNVCLLC*NCLFLR
Trigger: TCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACAC...ATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp CCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATAACAGTGTGCCTTCTTaGCTTGAACTGCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: PQQLSFRDSKLFLVAEVNNSVPS*LELPIS
Trigger: AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTT...ATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp CTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTTCTGCCAATCAGCATTaGGTTCAATTGTTTTCTCCC +
Preference number: 3 (lower is better)
Translates to: LVCWSSLKLSLLEDQKITSANQH*VQLFSP
Trigger: GGGAGAAAACAATTGAACCAAATGCTGATTGGCAGA...AGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR TCA 72 bp AATCTTCTGAAACAGGACTGCCCAAGGATGATCCAATaGTATTTGATTCTTCCTGATGATGTTGGAGTATGG +
Preference number: 3 (lower is better)
Translates to: NLLKQDCPRMIQ*YLILPDDVGVW
Trigger: CCATACTCCAACATCATCAGGAAGAATCAAATATCATTGGATCATCCTTGGGCAGTCCTGTTTCAGAAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp TCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGAACAGTGTGCCTTCTTaGCTTGAACTGCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: SYFFEEVVINSVPSLLELNSVPS*LELPIS
Trigger: AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTT...CAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp TGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTCAAACTTAGTCTTCTaGAAGATCAGAAGATCACTG +
Preference number: 3 (lower is better)
Translates to: WSSLKLSLLEDQKITGKLSNLVF*KIRRSL
Trigger: CAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGA...GAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp TTGGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCTCCAAAAGCGTTGGGTCAAACTTAGTCTTCTaGAAGATCAGAAGATCACTG +
Preference number: 3 (lower is better)
Translates to: LVLLFGTPDPDLFSKSVGSNLVF*KIRRSL
Trigger: CAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGA...CCCAACGCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR-3UTR CAA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTAAACTGAATATACAATaGTTCCCTAGGCAACCAACT +
Preference number: 3 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTKLNIQ*FPRQPT
Trigger: AGTTGGTTGCCTAGGGAACAATTGTATATTCAGTTT...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp AATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGATTCTGCCAATCAGCATTaGGTTCAATTGTTTTCTCCC +
Preference number: 3 (lower is better)
Translates to: NVIFISYIKFCYPEDEIDSANQH*VQLFSP
Trigger: GGGAGAAAACAATTGAACCAAATGCTGATTGGCAGA...ATCAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
3UTR-3UTR CAA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATCTTATGGTTTGCAATTaGCCTTTTGATGGTCCACCA +
Preference number: 3 (lower is better)
Translates to: EVVINSVPSLLELPISKNLMVCN*PFDGPP
Trigger: TGGTGGACCATCAAAAGGCAAATTGCAAACCATAAG...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
3UTR TCA 72 bp TTGGTCACTGAATTTGGATACATGAGCATCATTAAATaGTGGCTCCACAGTCATCTTAGGGTGATGAATTTC +
Preference number: 3 (lower is better)
Translates to: LVTEFGYMSIIK*WLHSHLRVMNF
Trigger: GAAATTCATCACCCTAAGATGACTGTGGAGCCATCATTTAATGATGCTCATGTATCCAAATTCAGTGACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR TCA 72 bp AGTTCTGTGCTATTTTGGTCACTGAATTTGGATACATaGGCATCATTAAATGATGGCTCCACAGTCATCTTA +
Preference number: 3 (lower is better)
Translates to: SSVLFWSLNLDT*ASLNDGSTVIL
Trigger: TAAGATGACTGTGGAGCCATCATTTAATGATGCTCATGTATCCAAATTCAGTGACCAAAATAGCACAGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR-3UTR CAA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAAAAACTGAATATACAATaGTTCCCTAGGCAACCAACT +
Preference number: 3 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNEKLNIQ*FPRQPT
Trigger: AGTTGGTTGCCTAGGGAACAATTGTATATTCAGTTT...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR TCA 72 bp TTATATTGTACCCCACCAGCTAACACACTAAGTGGATaGCAAACTATTCTCTCGGTAATTTATATAGCAAAA +
Preference number: 3 (lower is better)
Translates to: LYCTPPANTLSG*QTILSVIYIAK
Trigger: TTTTGCTATATAAATTACCGAGAGAATAGTTTGTCATCCACTTAGTGTGTTAGCTGGTGGGGTACAATATAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TCTGAGCGGGTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGGGGATATGGAAGAAGTaGTGTCCTCTGTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: SERVPTRSATAAQDTPCVGIWKK*CPLWQQ
Trigger: CTGTTGCCACAGAGGACATCACTTCTTCCATATCCC...CACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTACCCGCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR GCA 90 bp TCTGAGCGGGTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGATCTGGACTGGAATCTaGAATGCTGCCATGGGGCTA +
Preference number: 4 (lower is better)
Translates to: SERVPTRSATAAQDTPCVIWTGI*NAAMGL
Trigger: TAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGAT...CACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTACCCGCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp CTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAGATGACTGAGAGTGGCTGCAGCTaGAGTGAGCGAGCGCGACGA +
Preference number: 4 (lower is better)
Translates to: LGKCLLLGRLEAQENQMTESGCS*SERARR
Trigger: TCGTCGCGCTCGCTCACTCCAGCTGCAGCCACTCTC...AGTCATCTGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR TCA 90 bp TTCCTAGCGCCGCCCCTATTGTTGCCCAGTCATTGCCATGCTTTATCCGGAGCCAGCAGGAGAGTCTGCTaGAGCAGGGAACGAAACATC +
Preference number: 4 (lower is better)
Translates to: FLAPPLLLPSHCHALSGASRRVC*SRERNI
Trigger: GATGTTTCGTTCCCTGCTTCAGCAGACTCTCCTGCT...GGCTCCGGATAAAGCATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584619.5
CDS-3UTR GCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTGGTAGGTGCCTGGAGTaGCAGTGGGCTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: APTASNGLTKCTTTRPPPGRCLE*QWAVDG
Trigger: TCCATCTACAGCCCACTGGCACTCCAGGCACCTACC...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTCAGGAGAGTGGCTGCAGCTaGAGTGAGCGAGCGCGACGA +
Preference number: 4 (lower is better)
Translates to: STIYFVAIVVNGHYSIPQESGCS*SERARR
Trigger: TCGTCGCGCTCGCTCACTCCAGCTGCAGCCACTCTC...CTGAGGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR GCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTTCGTTCAGCCACAGCTaGCCAAGACACACCCTGTGT +
Preference number: 4 (lower is better)
Translates to: APTASNGLTKCTTTRPPPSFSHS*PRHTLC
Trigger: ACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGA...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTTAGGGGAAGGCCTATCTGGACTGGAATCTaGAATGCTGCCATGGGGCTA +
Preference number: 4 (lower is better)
Translates to: AAAVRVTVGLAVRVRGRPIWTGI*NAAMGL
Trigger: TAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGAT...AGGCCTTCCCCTAACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCCGGCGCCGACAGCTTaGGCCAGCCGGCGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLPAPTA*ASRREL
Trigger: TAGCTCCCGCCGGCTGGCGCAAGCTGTCGGCGCCGG...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394703.9
CDS-3UTR CCA 90 bp CCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTCTAAGAGGGAGGCCCTaGCCGGAACGTGCGGGGACG +
Preference number: 4 (lower is better)
Translates to: PLGGCSYFFEEVVINSVPLRGRP*PERAGT
Trigger: CGTCCCCGCACGTTCCGGCCAGGGCCTCCCTCTTAG...AGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394703.9
CDS-3UTR CCA 90 bp GACTCATCTGAACTACAACCAGGCTTGAGAGGAGACAGTGCCATGTCTGATCTTGAGAGTGGCTGCAGCTaGAGTGAGCGAGCGCGACGA +
Preference number: 4 (lower is better)
Translates to: DSSELQPGLRGDSAMSDLESGCS*SERARR
Trigger: TCGTCGCGCTCGCTCACTCCAGCTGCAGCCACTCTC...AAGATCAGACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTCAGATGAGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR TCA 90 bp ACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCACCTGCTTGGCTAACTGCTaGAACTTCCTCGTTACCCAA +
Preference number: 4 (lower is better)
Translates to: TDSFSHSCPRHTLCDYVTCLANC*NFLVTQ
Trigger: TTGGGTAACGAGGAAGTTTCAGCAGTTAGCCAAGCA...GGTGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp TCTGAGCGGGTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGAGACAGTGCCATGTCTaGTCTTTAGAGAAACTGTAC +
Preference number: 4 (lower is better)
Translates to: SERVPTRSATAAQDTPCVRQCHV*SLEKLY
Trigger: GTACAGTTTCTCTAAAGATCAGACATGGCACTGTCT...CACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTACCCGCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR TCA 90 bp CCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACTTTCTACTCTGCAGCCTaGGCCACGGGCACCGCCCGG +
Preference number: 4 (lower is better)
Translates to: PCNTKQGFMLKTPSLHSTFYSAA*ATGTAR
Trigger: CCGGGCGGTGCCCGTGGCTCAGGCTGCAGAGTAGAA...AGTTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394703.9
CDS-3UTR TCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGCAGGAGAGTCTGCTaGAGCAGGGAACGAAACATC +
Preference number: 4 (lower is better)
Translates to: APTASNGLTKCTTTRPPPSRRVC*SRERNI
Trigger: GATGTTTCGTTCCCTGCTTCAGCAGACTCTCCTGCT...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413276.6
CDS-3UTR GCA 90 bp ACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTGGTAGGTGCCTGGAGTaGCAGTGGGCTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: TASNGLTKCTTTRPPPRSGRCLE*QWAVDG
Trigger: TCCATCTACAGCCCACTGGCACTCCAGGCACCTACC...AGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTTAGGGGAAGGCCTAATCTAGACAACGGATaGATCAGCTACAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: AAAVRVTVGLAVRVRGRPNLDNG*ISYSPS
Trigger: GGAAGGGCTGTAGCTGATCCATCCGTTGTCTAGATT...AGGCCTTCCCCTAACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GGAGAAGCAGGAGCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTTCCGGTTCAGACCCCATaGTATAGTCCTGTAGAAATC +
Preference number: 4 (lower is better)
Translates to: GEAGAAAVRVTVGLAVRVPVQTP*YSPVEI
Trigger: GATTTCTACAGGACTATAGCATGGGGTCTGAACCGG...AACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGCTCCTGCTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCGCCCAGTCATTGCCATaGTTTATCCGGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ISSHCQQWVNQMYHHKTTAQSLP*FIRSSL
Trigger: CAAGGAGCTCCGGATAAAGCATGGCAATGACTGGGC...GGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000547146.6
ENST00000579850.5
CDS-3UTR GCA 90 bp ATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCCGCCGCCCCTATTGTTaGCCAGTCATTGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: MVHHLLRSHCGERTLLHPRRPYC*PVIAML
Trigger: AAGCATGGCAATGACTGGGCAACAATAGGGGCGGCG...GGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp GTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCATGTCACCTGGCTCAGTaGTTGTCAACTCATGAACCA +
Preference number: 4 (lower is better)
Translates to: VPTRSATAAQDTPCVTMSCHLAQ*LSTHEP
Trigger: TGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACA...TGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp GGAGAAGCAGGAGCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTTTGTCACCTGGCTCAGTaGTTGTCAACTCATGAACCA +
Preference number: 4 (lower is better)
Translates to: GEAGAAAVRVTVGLAVRVCHLAQ*LSTHEP
Trigger: TGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACA...AACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGCTCCTGCTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTCGTTCAGCCACAGCTaGCCAAGACACACCCTGTGT +
Preference number: 4 (lower is better)
Translates to: MVHHLLRSHCGERTLLHPSFSHS*PRHTLC
Trigger: ACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGA...GGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp AGCCATTGTGGTGAACGGACACTACTCCATCCCTCAGCTAACAGATCCCAGTTATCGTTCAGCCACAGCTaGCCAAGACACACCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SHCGERTLLHPSANRSQLSFSHS*PRHTLC
Trigger: ACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGA...TAACTGGGATCTGTTAGCTGAGGGATGGAGTAGTGTCCGTTCACCACAATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTATCTGGACTGGAATCTaGAATGCTGCCATGGGGCTA +
Preference number: 4 (lower is better)
Translates to: APTASNGLTKCTTTRPPPIWTGI*NAAMGL
Trigger: TAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGAT...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GACTCATCTGAACTACAACCAGGCTTGAGAGGAGACAGTGCCATGTCTGATCTTGGTAGGTGCCTGGAGTaGCAGTGGGCTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: DSSELQPGLRGDSAMSDLGRCLE*QWAVDG
Trigger: TCCATCTACAGCCCACTGGCACTCCAGGCACCTACC...AAGATCAGACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTCAGATGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTACGGGCGAGAGTGGCTaGAGCTGGAGTGAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: LTKCTTTRPPPRSLYLYATGESG*SWSERA
Trigger: CGCTCGCTCACTCCAGCTGCAGCCACTCTCGCCCGT...AGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR GCA 90 bp TCTGAGCGGGTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGCCTAAAACAAGAGTCTaGCAATCAGCATTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: SERVPTRSATAAQDTPCVPKTRV*QSAFGS
Trigger: TGAACCAAATGCTGATTGGCAGACTCTTGTTTTAGG...CACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTACCCGCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp CGCCCCTATTGTTGCCCAGTCATTGCCATGCTTTATCCGGAGCCTAAAACAAGATGGGTCCGGGCACTTTaGAAGAACCAGGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: RPYCCPVIAMLYPEPKTRWVRAL*KNQDGS
Trigger: GCTTCCATCCTGGTTCTTCCAAAGTGCCCGGACCCA...TCTTGTTTTAGGCTCCGGATAAAGCATGGCAATGACTGGGCAACAATAGGGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp AGGAGAAGCAGGAGCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTCCAGTGGGCTGTAGATaGAAAGAGGGAAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: RRSRSSSCQGYCGTSSQSPVGCR*KEGRIS
Trigger: TGAGATTCTTCCCTCTTTCCATCTACAGCCCACTGG...ACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGCTCCTGCTTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TCTTCTTCTGTCCACTTCCCTGTGTTGCAAGTATCCTTCATCAGTCGGCACCGATGCCTGGAGTGCCAGTaGGCTGTAGATGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SSSVHFPVLQVSFISRHRCLECQ*AVDGKR
Trigger: CCTCTTTCCATCTACAGCCCACTGGCACTCCAGGCA...TCGGTGCCGACTGATGAAGGATACTTGCAACACAGGGAAGTGGACAGAAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp TCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTCAGTGCCTGGAGTGCCAGTaGGCTGTAGATGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: STIYFVAIVVNGHYSIPQCLECQ*AVDGKR
Trigger: CCTCTTTCCATCTACAGCCCACTGGCACTCCAGGCA...CTGAGGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp GCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTTAGGGGAAGGCCTTGGAAGTGCAACAACTaGTATGCAAGGAGTAGAATC +
Preference number: 4 (lower is better)
Translates to: AAAVRVTVGLAVRVRGRPWKCNN*YARSRI
Trigger: GATTCTACTCCTTGCATATCAGTTGTTGCACTTCCA...AGGCCTTCCCCTAACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp GTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTAGTCGGCACCGATCTTTaGCAGAAGATGCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: VIWTGICNAAMGLEEMAVVGTDL*QKMHFF
Trigger: GAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGAC...TACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp AGACACACCCTGTGTGACTATGTCACCTGGCTCAGTGCTTGTCAACTCATGAACACGACATTGCTTTTCTaGGCGGGTACCGACTCGTTC +
Preference number: 4 (lower is better)
Translates to: RHTLCDYVTWLSACQLMNTTLLF*AGTDSF
Trigger: GAACGAGTCGGTACCCGCTCAGAAAAGCAATGTCGT...GTTCATGAGTTGACAAGCACTGAGCCAGGTGACATAGTCACACAGGGTGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp ATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCAACTACAACCAGGCTTaGGAGGAGACAGTGCCATGT +
Preference number: 4 (lower is better)
Translates to: ISSHCQQWVNQMYHHKTTNYNQA*EETVPC
Trigger: ACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTT...GGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTCCGGTTCAGACCCCATaGTATAGTCCTGTAGAAATC +
Preference number: 4 (lower is better)
Translates to: APTASNGLTKCTTTRPPPPVQTP*YSPVEI
Trigger: GATTTCTACAGGACTATAGCATGGGGTCTGAACCGG...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACGCCGCCCCTATTGTTaGCCAGTCATTGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: PKSAPTASNGLTKCTTTRRRPYC*PVIAML
Trigger: AAGCATGGCAATGACTGGGCAACAATAGGGGCGGCG...TCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GACTCATCTGAACTACAACCAGGCTTGAGAGGAGACAGTGCCATGTCTGATCTTTCGTTCAGCCACAGCTaGCCAAGACACACCCTGTGT +
Preference number: 4 (lower is better)
Translates to: DSSELQPGLRGDSAMSDLSFSHS*PRHTLC
Trigger: ACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGA...AAGATCAGACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTCAGATGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CTATCGACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCATCGTTCAGCCACAGCTaGCCAAGACACACCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LSTVSSAWDMEEVMSSVASFSHS*PRHTLC
Trigger: ACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGA...TGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTCGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCTGCGGGGACGGCAGCTaGAACGTCAGGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLCGDGS*NVRKAR
Trigger: CCTGGCCTTCCTGACGTTGCAGCTGCCGTCCCCGCA...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394703.9
CDS-3UTR GCA 90 bp TCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGGCCCTGGCCGGAACGTaGGGGGACGGCAGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: SYFFEEVVINSVPSLLELALAGT*GDGSCN
Trigger: GTTGCAGCTGCCGTCCCCGCACGTTCCGGCCAGGGC...CAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394703.9
CDS-3UTR GCA 90 bp TTGGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCTCCAAAAGCGTTGGGACGGGCGAGAGTGGCTaGAGCTGGAGTGAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: LVLLFGTPDPDLFSKSVGTGESG*SWSERA
Trigger: CGCTCGCTCACTCCAGCTGCAGCCACTCTCGCCCGT...CCCAACGCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp GACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTATTATCTTCTGGGTCCGGGCACTTTaGAAGAACCAGGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: DWNLQCCHGARRDGCIIFWVRAL*KNQDGS
Trigger: GCTTCCATCCTGGTTCTTCCAAAGTGCCCGGACCCA...GAAGATAATACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCACTGTGGTTGCAGTCATaGTCACTTCAAAGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: VPTRSATAAQDTPCVTMSLWLQS*SLQSSD
Trigger: ATCAGAGCTTTGAAGTGACCATGACTGCAACCACAG...TGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp GTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCACATCTGCTACTTCTGTaGTTGCAGTCATGGTCACTT +
Preference number: 4 (lower is better)
Translates to: VPTRSATAAQDTPCVTMSHLLLL*LQSWSL
Trigger: AAGTGACCATGACTGCAACCACAGAAGTAGCAGATG...TGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTCCAGTGGGCTGTAGATaGAAAGAGGGAAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: APTASNGLTKCTTTRPPPPVGCR*KEGRIS
Trigger: TGAGATTCTTCCCTCTTTCCATCTACAGCCCACTGG...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp AGGAGAAGCAGGAGCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTCTGAATGATGACTCTTaGTGTGTGACACTGCACTGT +
Preference number: 4 (lower is better)
Translates to: RRSRSSSCQGYCGTSSQSLNDDS*CVTLHC
Trigger: ACAGTGCAGTGTCACACACCAAGAGTCATCATTCAG...ACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGCTCCTGCTTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR CAA 72 bp CTTCTTCCTAGCGCCGCCCCTATTGTTGCCCAGTCATaGCCATGCTTTATCCGGAGCCTAAAACAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LLPSAAPIVAQS*PCFIRSLKQES
Trigger: AGACTCTTGTTTTAGGCTCCGGATAAAGCATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAGGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp TGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTGTCGGCACCGATCTTTaGCAGAAGATGCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: WSTIYFVAIVVNGHYSIPVGTDL*QKMHFF
Trigger: GAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGAC...AGGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp CCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCACGACATTGCTTTTCTaGGCGGGTACCGACTCGTTC +
Preference number: 4 (lower is better)
Translates to: PNVPPQDHLLGLYTCMLVTTLLF*AGTDSF
Trigger: GAACGAGTCGGTACCCGCTCAGAAAAGCAATGTCGT...GACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGAACGACATTGCTTTTCTaGGCGGGTACCGACTCGTTC +
Preference number: 4 (lower is better)
Translates to: PKSAPTASNGLTKCTTTRTTLLF*AGTDSF
Trigger: GAACGAGTCGGTACCCGCTCAGAAAAGCAATGTCGT...TCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCGGGCAACTCTTATCTaGACATGCTGCACACTGGAA +
Preference number: 4 (lower is better)
Translates to: TASNGLTKCTTTRPPPRSRATLI*TCCTLE
Trigger: TTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCG...AGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp ATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCCGGGCAACTCTTATCTaGACATGCTGCACACTGGAA +
Preference number: 4 (lower is better)
Translates to: MVHHLLRSHCGERTLLHPRATLI*TCCTLE
Trigger: TTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCG...GGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp AGGAGAAGCAGGAGCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTATGACTCTTGGTGTGTaGCACTGCACTGTAACATTA +
Preference number: 4 (lower is better)
Translates to: RRSRSSSCQGYCGTSSQSMTLGV*HCTVTL
Trigger: TAATGTTACAGTGCAGTGTCACACACCAAGAGTCAT...ACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGCTCCTGCTTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCTGTGGCAACAGTCTaGATGATGACTCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: ISSHCQQWVNQMYHHKTTSVATV*MMTLGV
Trigger: CACACCAAGAGTCATCATTCAGACTGTTGCCACAGA...GGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTTAGGGGAAGGCCTGATAAAGCCATGTGGTaGAGGAACGATAAGTATTGT +
Preference number: 4 (lower is better)
Translates to: AAAVRVTVGLAVRVRGRPDKAMW*RNDKYC
Trigger: ACAATACTTATCGTTCCTTCACCACATGGCTTTATC...AGGCCTTCCCCTAACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCATGGGCAGCAATACTTTaGGAGCCAAAGTTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: VPTRSATAAQDTPCVTMSWAAIL*EPKFES
Trigger: ACTTTCAAACTTTGGCTCTCAAAGTATTGCTGCCCA...TGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp TTCATCAGTCGGCACCGATCTTTGACAGAAGATGCACTTCTTCCTAGCGCCGCCCTTCTTCTTCCCATTTaGCTGGTTTGGAAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: FISRHRSLTEDALLPSAALLLPI*LVWKLW
Trigger: CCACAACTTCCAAACCAGTCAAATGGGAAGAAGAAG...GGCGGCGCTAGGAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACTGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp ATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCCCGGTTCAGACCCCATaGTATAGTCCTGTAGAAATC +
Preference number: 4 (lower is better)
Translates to: ISSHCQQWVNQMYHHKTTPVQTP*YSPVEI
Trigger: GATTTCTACAGGACTATAGCATGGGGTCTGAACCGG...GGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GACTCATCTGAACTACAACCAGGCTTGAGAGGAGACAGTGCCATGTCTGATCTTGCCCAGTCATTGCCATaGTTTATCCGGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: DSSELQPGLRGDSAMSDLAQSLP*FIRSSL
Trigger: CAAGGAGCTCCGGATAAAGCATGGCAATGACTGGGC...AAGATCAGACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTCAGATGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000547146.6
ENST00000579850.5
CDS-3UTR GCA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACCGCCGCCCCTATTGTTaGCCAGTCATTGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNRRPYC*PVIAML
Trigger: AAGCATGGCAATGACTGGGCAACAATAGGGGCGGCG...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACCGCCGCCCCTATTGTTaGCCAGTCATTGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYRRPYC*PVIAML
Trigger: AAGCATGGCAATGACTGGGCAACAATAGGGGCGGCG...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTCGTTCAGCCACAGCTaGCCAAGACACACCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYSFSHS*PRHTLC
Trigger: ACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGA...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GAAGAAACATGGGTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGACTGGAATCTGCAATaGTGCCATGGGGCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: EETWVIWTGICNAAMGLEDWNLQ*CHGARR
Trigger: TCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC...TTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCACCCATGTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTATCTGGACTGGAATCTaGAATGCTGCCATGGGGCTA +
Preference number: 4 (lower is better)
Translates to: TASNGLTKCTTTRPPPRSIWTGI*NAAMGL
Trigger: TAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGAT...AGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTCAGTACCCCCACTCTGTTTCCAATTCAGGTAGTTGAGCCATTTAGAACGACAGGTAGGTGCCTGGAGTaGCAGTGGGCTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: FSTPTLFPIQVVEPFRTTGRCLE*QWAVDG
Trigger: TCCATCTACAGCCCACTGGCACTCCAGGCACCTACC...TGTCGTTCTAAATGGCTCAACTACCTGAATTGGAAACAGAGTGGGGGTACTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR GCA 90 bp ATTTGCCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACAGGTAGGTGCCTGGAGTaGCAGTGGGCTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: ICLLMVHHLLRSHCGERTGRCLE*QWAVDG
Trigger: TCCATCTACAGCCCACTGGCACTCCAGGCACCTACC...TGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR GCA 90 bp GCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTTAGGGGAAGGCCTACAGTGTGCCTTCTTTaGTTGAACTGCCTATTTCTA +
Preference number: 4 (lower is better)
Translates to: AAAVRVTVGLAVRVRGRPTVCLL*LNCLFL
Trigger: TAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGT...AGGCCTTCCCCTAACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCACCACAGTGTGCCTTCTTTaGTTGAACTGCCTATTTCTA +
Preference number: 4 (lower is better)
Translates to: TDSFSHSCPRHTLCDYVTTVCLL*LNCLFL
Trigger: TAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGT...GGTGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR GCA 90 bp ATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCAGGCTGGTTTTTGTaGTTTCTACTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ISSHCQQWVNQMYHHKTTSGWFL*FLLCSL
Trigger: CAGGCTGCAGAGTAGAAAGCACAAAAACCAGCCTGA...GGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394703.9
CDS-3UTR GCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTACGGGCGAGAGTGGCTaGAGCTGGAGTGAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSTGESG*SWSERA
Trigger: CGCTCGCTCACTCCAGCTGCAGCCACTCTCGCCCGT...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR GCA 90 bp ATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTTGTTGCCCAGTCATTaGCATGCTTTATCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: MVHHLLRSHCGERTLLHPLLPSH*HALSGA
Trigger: GGCTCCGGATAAAGCATGGCAATGACTGGGCAACAA...GGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp ATGCACTTCTTCCTAGCGCCGCCCCTATTGTTGCCCAGTCATTGCCATGCTTTAAACACTTTCCTGTTTTaGGTCCGGGCACTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: MHFFLAPPLLLPSHCHALNTFLF*VRALWK
Trigger: CTTCCAAAGTGCCCGGACCCAAAACAGGAAAGTGTT...TAAAGCATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAGGAAGAAGTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTCTGTGGTTGCAGTCATaGTCACTTCAAAGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: APTASNGLTKCTTTRPPPLWLQS*SLQSSD
Trigger: ATCAGAGCTTTGAAGTGACCATGACTGCAACCACAG...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GGAGAAGCAGGAGCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTTGTTGTAAACCATGCTTaGCTAACTGCTGAAACTTCC +
Preference number: 4 (lower is better)
Translates to: GEAGAAAVRVTVGLAVRVVVNHA*LTAETS
Trigger: GGAAGTTTCAGCAGTTAGCCAAGCATGGTTTACAAC...AACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGCTCCTGCTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GGAGAAGCAGGAGCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTTGCTGCACACTGGAATTaGTATTACTGTTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: GEAGAAAVRVTVGLAVRVAAHWN*YYCLEL
Trigger: GAGTTCCAAACAGTAATACCAATTCCAGTGTGCAGC...AACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGCTCCTGCTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp GTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTAATGGGTGATCTGGACTaGAATCTGCAATGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: VIWTGICNAAMGLEEMAVMGDLD*NLQCCH
Trigger: ATGGCAGCATTGCAGATTCCAGTCCAGATCACCCAT...TACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTGCCTGGAGTGCCAGTaGGCTGTAGATGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYCLECQ*AVDGKR
Trigger: CCTCTTTCCATCTACAGCCCACTGGCACTCCAGGCA...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTCTGAATGATGACTCTTaGTGTGTGACACTGCACTGT +
Preference number: 4 (lower is better)
Translates to: APTASNGLTKCTTTRPPPLNDDS*CVTLHC
Trigger: ACAGTGCAGTGTCACACACCAAGAGTCATCATTCAG...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TCTGAGCGGGTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGAGTTCTGTGCTATTTTaGTCACTGAATTTGGATACA +
Preference number: 4 (lower is better)
Translates to: SERVPTRSATAAQDTPCVSSVLF*SLNLDT
Trigger: TGTATCCAAATTCAGTGACCAAAATAGCACAGAACT...CACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTACCCGCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp TTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTTGGGCGGAGCGGCCCTaGCGGCGGTTGGAACCTGAA +
Preference number: 4 (lower is better)
Translates to: FEEVVINSVPSLLELPISWAERP*RRLEPE
Trigger: TTCAGGTTCCAACCGCCGCCAGGGCCGCTCCGCCCA...AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394703.9
CDS-3UTR CCA 90 bp CATTGTGGTGAACGGACACTACTCCATCCCTCAGCTAACAGATCCCAGTTAATGTGGCTAGACAACGGATaGATCAGCTACAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: HCGERTLLHPSANRSQLMWLDNG*ISYSPS
Trigger: GGAAGGGCTGTAGCTGATCCATCCGTTGTCTAGCCA...CATTAACTGGGATCTGTTAGCTGAGGGATGGAGTAGTGTCCGTTCACCACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412139.6
CDS-3UTR TCA 90 bp CTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAGATGACTTTATCCGGAGCTCCTTaGGCTTCTCAATTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LGKCLLLGRLEAQENQMTLSGAP*ASQFLQ
Trigger: CTGAAGAAATTGAGAAGCTCAAGGAGCTCCGGATAA...AGTCATCTGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547146.6
ENST00000579850.5
CDS-3UTR TCA 90 bp GGTGATGAATTTCATCTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGTTATCCGGAGCTCCTTaGGCTTCTCAATTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GDEFHLGKCLLLGRLEAQLSGAP*ASQFLQ
Trigger: CTGAAGAAATTGAGAAGCTCAAGGAGCTCCGGATAA...CTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAATTCATCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547146.6
ENST00000579850.5
CDS-3UTR TCA 90 bp ATTTCATCTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAGTCGGCACCGATCTTTaGCAGAAGATGCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: ISSGKVSASRASGGSGKSVGTDL*QKMHFF
Trigger: GAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGAC...TGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCGTCGGCACCGATCTTTaGCAGAAGATGCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: TVSSAWDMEEVMSSVATVVGTDL*QKMHFF
Trigger: GAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGAC...GACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TGCCCAGTCATTGCCATGCTTTATCCGGAGCCTAAAACAAGAGTCTGCCAATCAGTCGGCACCGATCTTTaGCAGAAGATGCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: CPVIAMLYPEPKTRVCQSVGTDL*QKMHFF
Trigger: GAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGAC...TGATTGGCAGACTCTTGTTTTAGGCTCCGGATAAAGCATGGCAATGACTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp CACCTGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCAAGTCTCTTTTCTTACGACATTGCTTTTCTaGGCGGGTACCGACTCGTTC +
Preference number: 4 (lower is better)
Translates to: HLAQCLSTHEPLLQVSFLTTLLF*AGTDSF
Trigger: GAACGAGTCGGTACCCGCTCAGAAAAGCAATGTCGT...AAGAAAAGAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp CTATCGACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCACGGGCAACTCTTATCTaGACATGCTGCACACTGGAA +
Preference number: 4 (lower is better)
Translates to: LSTVSSAWDMEEVMSSVARATLI*TCCTLE
Trigger: TTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCG...TGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTCGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp GACTCATCTGAACTACAACCAGGCTTGAGAGGAGACAGTGCCATGTCTGATCTTCGGGCAACTCTTATCTaGACATGCTGCACACTGGAA +
Preference number: 4 (lower is better)
Translates to: DSSELQPGLRGDSAMSDLRATLI*TCCTLE
Trigger: TTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCG...AAGATCAGACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTCAGATGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp GAAGAAACATGGGTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAACTGAAGAAACATGGGTaGTCTGGACTGGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: EETWVIWTGICNAAMGLELKKHG*SGLESA
Trigger: TGCAGATTCCAGTCCAGATCACCCATGTTTCTTCAG...TTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCACCCATGTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TTCATCAGTCGGCACCGATCTTTGACAGAAGATGCACTTCTTCCTAGCGCCGCCATGACTCTTGGTGTGTaGCACTGCACTGTAACATTA +
Preference number: 4 (lower is better)
Translates to: FISRHRSLTEDALLPSAAMTLGV*HCTVTL
Trigger: TAATGTTACAGTGCAGTGTCACACACCAAGAGTCAT...GGCGGCGCTAGGAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACTGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR TCA 90 bp ACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTTCTGTGGCAACAGTCTaGATGATGACTCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: TASNGLTKCTTTRPPPRSSVATV*MMTLGV
Trigger: CACACCAAGAGTCATCATTCAGACTGTTGCCACAGA...AGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAGGGATATGGAAGAAGTaGTGTCCTCTGTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: TTTRPPPRSLYLYAGQVSGIWKK*CPLWQQ
Trigger: CTGTTGCCACAGAGGACATCACTTCTTCCATATCCC...TGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTGGGATATGGAAGAAGTaGTGTCCTCTGTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCGIWKK*CPLWQQ
Trigger: CTGTTGCCACAGAGGACATCACTTCTTCCATATCCC...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCACCCCAAGGATGATCCAATaGTATTTGATTCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: TDSFSHSCPRHTLCDYVTPRMIQ*YLILPD
Trigger: ATCAGGAAGAATCAAATATCATTGGATCATCCTTGG...GGTGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR TCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGACAGTGCCATGTCTaGTCTTTAGAGAAACTGTAC +
Preference number: 4 (lower is better)
Translates to: APTASNGLTKCTTTRPPPRQCHV*SLEKLY
Trigger: GTACAGTTTCTCTAAAGATCAGACATGGCACTGTCT...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACTGCGGCGGTTGGAACCTaGAGGTTCCATCGCACTTAC +
Preference number: 4 (lower is better)
Translates to: PCNTKQGFMLKTPSLHSTAAVGT*RFHRTY
Trigger: GTAAGTGCGATGGAACCTTCAGGTTCCAACCGCCGC...AGTTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394703.9
CDS-3UTR GCA 90 bp GACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCCCACAGAATCAAGTTaGCTTCCCTTAGCAACCAGC +
Preference number: 4 (lower is better)
Translates to: DCQFCLGYGRSDVLCGNSPTESS*LPLATS
Trigger: GCTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGG...ACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTCCTAGCGCCGCCCCTATTGTTGCCCAGTCATTGCCATGCTTTATCCGGAGCCTCTAGTTGCTCATTCTaGAAAATCTGTATCTGTGTC +
Preference number: 4 (lower is better)
Translates to: FLAPPLLLPSHCHALSGASSCSF*KICICV
Trigger: GACACAGATACAGATTTTGCAGAATGAGCAACTAGA...GGCTCCGGATAAAGCATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp TGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTCCGGTTCAGACCCCATaGTATAGTCCTGTAGAAATC +
Preference number: 4 (lower is better)
Translates to: WSTIYFVAIVVNGHYSIPPVQTP*YSPVEI
Trigger: GATTTCTACAGGACTATAGCATGGGGTCTGAACCGG...AGGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp TTCATCAGTCGGCACCGATCTTTGACAGAAGATGCACTTCTTCCTAGCGCCGCCCACTCTTCTATAAACTaGAAACAAAGGCCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: FISRHRSLTEDALLPSAAHSSIN*KQRPVQ
Trigger: CTGAACCGGCCTTTGTTTGCAGTTTATAGAAGAGTG...GGCGGCGCTAGGAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACTGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp CCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTCGCCGCCCCTATTGTTaGCCAGTCATTGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: PLGGCSYFFEEVVINSVPRRPYC*PVIAML
Trigger: AAGCATGGCAATGACTGGGCAACAATAGGGGCGGCG...AGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTGTCACCTGGCTCAGTaGTTGTCAACTCATGAACCA +
Preference number: 4 (lower is better)
Translates to: MVHHLLRSHCGERTLLHPCHLAQ*LSTHEP
Trigger: TGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACA...GGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp CCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCGTTCAGCCACAGCTaGCCAAGACACACCCTGTGT +
Preference number: 4 (lower is better)
Translates to: PLGGCSYFFEEVVINSVPSFSHS*PRHTLC
Trigger: ACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGA...AGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTCCTAGCGCCGCCCCTATTGTTGCCCAGTCATTGCCATGCTTTATCCGGAGCCTTATGGTTTGCAATTTaGCTTTTGATGGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: FLAPPLLLPSHCHALSGALWFAI*LLMVHH
Trigger: ATGGTGGACCATCAAAAGGCAAATTGCAAACCATAA...GGCTCCGGATAAAGCATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp ACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTTGGAATCTGCAATGCTaGCATGGGGCTAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: TASNGLTKCTTTRPPPRSWNLQC*HGARRD
Trigger: ATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCA...AGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTCAGTGGAATCTGCAATGCTaGCATGGGGCTAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: STIYFVAIVVNGHYSIPQWNLQC*HGARRD
Trigger: ATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCA...CTGAGGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR GCA 90 bp GACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTGACTGGAATCTGCAATaGTGCCATGGGGCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: DCQFCLGYGRSDVLCGNSDWNLQ*CHGARR
Trigger: TCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC...ACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGAGACTGGAATCTGCAATaGTGCCATGGGGCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: PKSAPTASNGLTKCTTTRDWNLQ*CHGARR
Trigger: TCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC...TCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGGTAGGTGCCTGGAGTaGCAGTGGGCTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLGRCLE*QWAVDG
Trigger: TCCATCTACAGCCCACTGGCACTCCAGGCACCTACC...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTATCGACTGTCAGTTCTaGTTGGGATATGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: APTASNGLTKCTTTRPPPIDCQF*LGYGRS
Trigger: ACTTCTTCCATATCCCAAGCAGAACTGACAGTCGAT...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GGAGAAGCAGGAGCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTTATCTATAACATCAGATaGCTGGATAAAGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: GEAGAAAVRVTVGLAVRVIYNIR*LDKAMW
Trigger: CCACATGGCTTTATCCAGGCATCTGATGTTATAGAT...AACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGCTCCTGCTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAAACGGGCGAGAGTGGCTaGAGCTGGAGTGAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNETGESG*SWSERA
Trigger: CGCTCGCTCACTCCAGCTGCAGCCACTCTCGCCCGT...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR GCA 90 bp ACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCTTGTTGCCCAGTCATTaGCATGCTTTATCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: TVSSAWDMEEVMSSVATVLLPSH*HALSGA
Trigger: GGCTCCGGATAAAGCATGGCAATGACTGGGCAACAA...GACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATTGGGTCCGGGCACTTTaGAAGAACCAGGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYWVRAL*KNQDGS
Trigger: GCTTCCATCCTGGTTCTTCCAAAGTGCCCGGACCCA...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAGAAACATGGGTGATCTGGAATCTAGACAACGGATaGATCAGCTACAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VSESTVAGESAEETWVIWNLDNG*ISYSPS
Trigger: GGAAGGGCTGTAGCTGATCCATCCGTTGTCTAGATT...CCAGATCACCCATGTTTCTTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TCCTTCATCAGTCGGCACCGATCTTTGACAGAAGATGCACTTCTTCCTAGCGCCCTGTGGTTGCAGTCATaGTCACTTCAAAGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: SFISRHRSLTEDALLPSALWLQS*SLQSSD
Trigger: ATCAGAGCTTTGAAGTGACCATGACTGCAACCACAG...GGCGCTAGGAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACTGATGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp CTGTGTGACTATGTCACCTGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCTGTGACTATGTCACCTaGCTCAGTGCTTGTCAACTC +
Preference number: 4 (lower is better)
Translates to: LCDYVTWLSACQLMNHFCCDYVT*LSACQL
Trigger: GAGTTGACAAGCACTGAGCCAGGTGACATAGTCACA...GCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACATAGTCACACAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp GTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCAGAACATGCTGCACACTaGAATTGGTATTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: VPTRSATAAQDTPCVTMSEHAAH*NWYYCL
Trigger: CAAACAGTAATACCAATTCCAGTGTGCAGCATGTTC...TGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp CTGTGTGACTATGTCACCTGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCATGGGTGATCTGGACTaGAATCTGCAATGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LCDYVTWLSACQLMNHFCMGDLD*NLQCCH
Trigger: ATGGCAGCATTGCAGATTCCAGTCCAGATCACCCAT...GCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACATAGTCACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp AGGATGAGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCTGCCTGGAGTGCCAGTaGGCTGTAGATGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: RMRLISSSLVHSVPPLCFCLECQ*AVDGKR
Trigger: CCTCTTTCCATCTACAGCCCACTGGCACTCCAGGCA...GAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCTCATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATTGCCTGGAGTGCCAGTaGGCTGTAGATGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYCLECQ*AVDGKR
Trigger: CCTCTTTCCATCTACAGCCCACTGGCACTCCAGGCA...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCCTGAATGATGACTCTTaGTGTGTGACACTGCACTGT +
Preference number: 4 (lower is better)
Translates to: ISSHCQQWVNQMYHHKTTLNDDS*CVTLHC
Trigger: ACAGTGCAGTGTCACACACCAAGAGTCATCATTCAG...GGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTACAGCAACAATGTGTGTaGCTTAAGGACTGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: VIWTGICNAAMGLEEMAVQQQCV*LKDCGY
Trigger: ATAGCCACAGTCCTTAAGCCACACACATTGTTGCTG...TACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGGCCCTGGCGGCGGTTaGAACCTGAAGGTTCCATCG +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSGPGGG*NLKVPS
Trigger: CGATGGAACCTTCAGGTTCCAACCGCCGCCAGGGCC...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394703.9
CDS-3UTR TCA 90 bp ATGCACTTCTTCCTAGCGCCGCCCCTATTGTTGCCCAGTCATTGCCATGCTTTAGCTCTGATCATTTTCTaGAAGTGGAAGTGCAACAAC +
Preference number: 4 (lower is better)
Translates to: MHFFLAPPLLLPSHCHALALIIF*KWKCNN
Trigger: GTTGTTGCACTTCCACTTTCAGAAAATGATCAGAGC...TAAAGCATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAGGAAGAAGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTTGCTTGGCTAACTGCTaGAACTTCCTCGTTACCCAA +
Preference number: 4 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCCLANC*NFLVTQ
Trigger: TTGGGTAACGAGGAAGTTTCAGCAGTTAGCCAAGCA...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAATGCTTGGCTAACTGCTaGAACTTCCTCGTTACCCAA +
Preference number: 4 (lower is better)
Translates to: PPQDHLLGLYTCMLVKSQCLANC*NFLVTQ
Trigger: TTGGGTAACGAGGAAGTTTCAGCAGTTAGCCAAGCA...TTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GACTCATCTGAACTACAACCAGGCTTGAGAGGAGACAGTGCCATGTCTGATCTTTGCTTGGCTAACTGCTaGAACTTCCTCGTTACCCAA +
Preference number: 4 (lower is better)
Translates to: DSSELQPGLRGDSAMSDLCLANC*NFLVTQ
Trigger: TTGGGTAACGAGGAAGTTTCAGCAGTTAGCCAAGCA...AAGATCAGACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTCAGATGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CATTGTGGTGAACGGACACTACTCCATCCCTCAGCTAACAGATCCCAGTTAATGTGCTTGGCTAACTGCTaGAACTTCCTCGTTACCCAA +
Preference number: 4 (lower is better)
Translates to: HCGERTLLHPSANRSQLMCLANC*NFLVTQ
Trigger: TTGGGTAACGAGGAAGTTTCAGCAGTTAGCCAAGCA...CATTAACTGGGATCTGTTAGCTGAGGGATGGAGTAGTGTCCGTTCACCACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp CCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAGTGCTTGTCAACTCATaGACCACTTCTGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: PPQDHLLGLYTCMLVKSQVLVNS*TTSASL
Trigger: GAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCAC...TTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TGCCCAGTCATTGCCATGCTTTATCCGGAGCCTAAAACAAGAGTCTGCCAATCAGTGCTTGTCAACTCATaGACCACTTCTGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: CPVIAMLYPEPKTRVCQSVLVNS*TTSASL
Trigger: GAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCAC...TGATTGGCAGACTCTTGTTTTAGGCTCCGGATAAAGCATGGCAATGACTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTCTGAAGAAACATGGGTaGTCTGGACTGGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCLKKHG*SGLESA
Trigger: TGCAGATTCCAGTCCAGATCACCCATGTTTCTTCAG...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTAATGACTCTTGGTGTGTaGCACTGCACTGTAACATTA +
Preference number: 4 (lower is better)
Translates to: VIWTGICNAAMGLEEMAVMTLGV*HCTVTL
Trigger: TAATGTTACAGTGCAGTGTCACACACCAAGAGTCAT...TACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCTCTGTGGCAACAGTCTaGATGATGACTCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: TVSSAWDMEEVMSSVATVSVATV*MMTLGV
Trigger: CACACCAAGAGTCATCATTCAGACTGTTGCCACAGA...GACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAATCTGTGGCAACAGTCTaGATGATGACTCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: PPQDHLLGLYTCMLVKSQSVATV*MMTLGV
Trigger: CACACCAAGAGTCATCATTCAGACTGTTGCCACAGA...TTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTTCTGTGGCAACAGTCTaGATGATGACTCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: DCQFCLGYGRSDVLCGNSSVATV*MMTLGV
Trigger: CACACCAAGAGTCATCATTCAGACTGTTGCCACAGA...ACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp AGGAGAAGCAGGAGCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTCTGAATTTGGATACATaGGCATCATTAAATGATGGC +
Preference number: 4 (lower is better)
Translates to: RRSRSSSCQGYCGTSSQSLNLDT*ASLNDG
Trigger: GCCATCATTTAATGATGCTCATGTATCCAAATTCAG...ACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGCTCCTGCTTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCACCAAGGATGATCCAATaGTATTTGATTCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: VPTRSATAAQDTPCVTMSPRMIQ*YLILPD
Trigger: ATCAGGAAGAATCAAATATCATTGGATCATCCTTGG...TGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR TCA 90 bp GTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTAAGACAGTGCCATGTCTaGTCTTTAGAGAAACTGTAC +
Preference number: 4 (lower is better)
Translates to: VIWTGICNAAMGLEEMAVRQCHV*SLEKLY
Trigger: GTACAGTTTCTCTAAAGATCAGACATGGCACTGTCT...TACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAGATGACTAGACAGTGCCATGTCTaGTCTTTAGAGAAACTGTAC +
Preference number: 4 (lower is better)
Translates to: LGKCLLLGRLEAQENQMTRQCHV*SLEKLY
Trigger: GTACAGTTTCTCTAAAGATCAGACATGGCACTGTCT...AGTCATCTGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTTGGTTTCTGAGGGGGTaGAAACTGCTTAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCWFLRG*KLLRFW
Trigger: CCAGAATCTAAGCAGTTTTCACCCCCTCAGAAACCA...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TGCCCAGTCATTGCCATGCTTTATCCGGAGCCTAAAACAAGAGTCTGCCAATCATGGTTTCTGAGGGGGTaGAAACTGCTTAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: CPVIAMLYPEPKTRVCQSWFLRG*KLLRFW
Trigger: CCAGAATCTAAGCAGTTTTCACCCCCTCAGAAACCA...TGATTGGCAGACTCTTGTTTTAGGCTCCGGATAAAGCATGGCAATGACTGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR TCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTATCTCCGCAACACTCTaGAAAAGTAACAGCATTACA +
Preference number: 4 (lower is better)
Translates to: APTASNGLTKCTTTRPPPISATL*KSNSIT
Trigger: TGTAATGCTGTTACTTTTTCAGAGTGTTGCGGAGAT...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412139.6
CDS-3UTR TCA 90 bp TCCTTCATCAGTCGGCACCGATCTTTGACAGAAGATGCACTTCTTCCTAGCGCCTGGGCAGCAATACTTTaGGAGCCAAAGTTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: SFISRHRSLTEDALLPSAWAAIL*EPKFES
Trigger: ACTTTCAAACTTTGGCTCTCAAAGTATTGCTGCCCA...GGCGCTAGGAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACTGATGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp ATGCACTTCTTCCTAGCGCCGCCCCTATTGTTGCCCAGTCATTGCCATGCTTTATGGGCAGCAATACTTTaGGAGCCAAAGTTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: MHFFLAPPLLLPSHCHALWAAIL*EPKFES
Trigger: ACTTTCAAACTTTGGCTCTCAAAGTATTGCTGCCCA...TAAAGCATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAGGAAGAAGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp CTGTGTGACTATGTCACCTGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCGCTCTGATCATTTTCTaGAACATTCTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LCDYVTWLSACQLMNHFCALIIF*NILRAV
Trigger: CACTGCCCTCAGAATGTTTCAGAAAATGATCAGAGC...GCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACATAGTCACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425406.5
CDS-3UTR TCA 90 bp ACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCATCTGGTACTTTGCATaGGCACTAAACCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: TVSSAWDMEEVMSSVATVIWYFA*ALNPLR
Trigger: CCTCAGTGGGTTTAGTGCTCATGCAAAGTACCAGAT...GACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547146.6
CDS-3UTR GCA 90 bp CTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAGATGACTTGCTACTTCTGTGGTTaGAGTCATGGTCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: LGKCLLLGRLEAQENQMTCYFCG*SHGHFK
Trigger: TTTGAAGTGACCATGACTGCAACCACAGAAGTAGCA...AGTCATCTGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ATGCACTTCTTCCTAGCGCCGCCCCTATTGTTGCCCAGTCATTGCCATGCTTTATTGGACCACATCCCCTaGTTCCATTTATGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: MHFFLAPPLLLPSHCHALLDHIP*FHLCPL
Trigger: TAAAGGACATAAATGGAAGCAGGGGATGTGGTCCAA...TAAAGCATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAGGAAGAAGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp ATTTCATCTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCACCGGTTCAGACCCCATaGTATAGTCCTGTAGAAATC +
Preference number: 4 (lower is better)
Translates to: ISSGKVSASRASGGSGKSPVQTP*YSPVEI
Trigger: GATTTCTACAGGACTATAGCATGGGGTCTGAACCGG...TGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTTTGTTGCCCAGTCATTaGCATGCTTTATCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: DCQFCLGYGRSDVLCGNSLLPSH*HALSGA
Trigger: AGCTCCGGATAAAGCATGGCAATGACTGGGCAACAA...ACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547146.6
ENST00000579850.5
CDS-3UTR GCA 90 bp TTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTCGCCGCCCCTATTGTTaGCCAGTCATTGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: LTKCTTTRPPPRSLYLYARRPYC*PVIAML
Trigger: AAGCATGGCAATGACTGGGCAACAATAGGGGCGGCG...AGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCTGTCACCTGGCTCAGTaGTTGTCAACTCATGAACCA +
Preference number: 4 (lower is better)
Translates to: PNVPPQDHLLGLYTCMLVCHLAQ*LSTHEP
Trigger: TGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACA...GACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAGATGACTGAATATCACTGTCACCTGGCTCAGTaGTTGTCAACTCATGAACCA +
Preference number: 4 (lower is better)
Translates to: CLLLGRLEAQENQMTEYHCHLAQ*LSTHEP
Trigger: TGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACA...GTGATATTCAGTCATCTGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TCTTCTTCTGTCCACTTCCCTGTGTTGCAAGTATCCTTCATCAGTCGGCACCGACATTTAGAACGACATTaGTTTTCTGAGCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: SSSVHFPVLQVSFISRHRHLERH*FSERVP
Trigger: CGGTACCCGCTCAGAAAAGCAATGTCGTTCTAAATG...TCGGTGCCGACTGATGAAGGATACTTGCAACACAGGGAAGTGGACAGAAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp ACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCATTTAGAACGACATTaGTTTTCTGAGCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: TASNGLTKCTTTRPPPRSHLERH*FSERVP
Trigger: CGGTACCCGCTCAGAAAAGCAATGTCGTTCTAAATG...AGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GAAGAAACATGGGTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAACATTTAGAACGACATTaGTTTTCTGAGCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: EETWVIWTGICNAAMGLEHLERH*FSERVP
Trigger: CGGTACCCGCTCAGAAAAGCAATGTCGTTCTAAATG...TTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCACCCATGTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTCATCAGTCGGCACCGATCTTTGACAGAAGATGCACTTCTTCCTAGCGCCGCCAGCTACATCAAGTTCTaGTATCCTGAGGATGAGATT +
Preference number: 4 (lower is better)
Translates to: FISRHRSLTEDALLPSAASYIKF*YPEDEI
Trigger: AATCTCATCCTCAGGATAGCAGAACTTGATGTAGCT...GGCGGCGCTAGGAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACTGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp CCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCTGGAATCTGCAATGCTaGCATGGGGCTAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: PNVPPQDHLLGLYTCMLVWNLQC*HGARRD
Trigger: ATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCA...GACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCTGGAATCTGCAATGCTaGCATGGGGCTAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: TVSSAWDMEEVMSSVATVWNLQC*HGARRD
Trigger: ATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCA...GACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CACCTGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCAAGTCTCTTTTCTTGACTGGAATCTGCAATaGTGCCATGGGGCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: HLAQCLSTHEPLLQVSFLDWNLQ*CHGARR
Trigger: TCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC...AAGAAAAGAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR GCA 90 bp GGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTGGTAGGTGCCTGGAGTaGCAGTGGGCTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: GQVSNLVFLKIRRSLVSSGRCLE*QWAVDG
Trigger: TCCATCTACAGCCCACTGGCACTCCAGGCACCTACC...AGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTAAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGAGGTAGGTGCCTGGAGTaGCAGTGGGCTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: LKLPASTQLHTVIKLNLRGRCLE*QWAVDG
Trigger: TCCATCTACAGCCCACTGGCACTCCAGGCACCTACC...TCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCATCGACTGTCAGTTCTaGTTGGGATATGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: ISSHCQQWVNQMYHHKTTIDCQF*LGYGRS
Trigger: ACTTCTTCCATATCCCAAGCAGAACTGACAGTCGAT...GGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTAATCGACTGTCAGTTCTaGTTGGGATATGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: VIWTGICNAAMGLEEMAVIDCQF*LGYGRS
Trigger: ACTTCTTCCATATCCCAAGCAGAACTGACAGTCGAT...TACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTATCTATAACATCAGATaGCTGGATAAAGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: APTASNGLTKCTTTRPPPIYNIR*LDKAMW
Trigger: CCACATGGCTTTATCCAGGCATCTGATGTTATAGAT...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTCATCAGTCGGCACCGATCTTTGACAGAAGATGCACTTCTTCCTAGCGCCGCCATCTATAACATCAGATaGCTGGATAAAGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: FISRHRSLTEDALLPSAAIYNIR*LDKAMW
Trigger: CCACATGGCTTTATCCAGGCATCTGATGTTATAGAT...GGCGGCGCTAGGAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACTGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp GACTCATCTGAACTACAACCAGGCTTGAGAGGAGACAGTGCCATGTCTGATCTTAACACTTTCCTGTTTTaGGTCCGGGCACTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: DSSELQPGLRGDSAMSDLNTFLF*VRALWK
Trigger: CTTCCAAAGTGCCCGGACCCAAAACAGGAAAGTGTT...AAGATCAGACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTCAGATGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331242.12
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAATCTAGACAACGGATaGATCAGCTACAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: TTTRPPPRSLYLYAGQVSNLDNG*ISYSPS
Trigger: GGAAGGGCTGTAGCTGATCCATCCGTTGTCTAGATT...TGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTGTGGTTGCAGTCATaGTCACTTCAAAGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: TASNGLTKCTTTRPPPRSLWLQS*SLQSSD
Trigger: ATCAGAGCTTTGAAGTGACCATGACTGCAACCACAG...AGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAGAAACATGGGTGATCTGGCTGTGGTTGCAGTCATaGTCACTTCAAAGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: VSESTVAGESAEETWVIWLWLQS*SLQSSD
Trigger: ATCAGAGCTTTGAAGTGACCATGACTGCAACCACAG...CCAGATCACCCATGTTTCTTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCATCTGCTACTTCTGTaGTTGCAGTCATGGTCACTT +
Preference number: 4 (lower is better)
Translates to: TASNGLTKCTTTRPPPRSHLLLL*LQSWSL
Trigger: AAGTGACCATGACTGCAACCACAGAAGTAGCAGATG...AGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CGCCCCTATTGTTGCCCAGTCATTGCCATGCTTTATCCGGAGCCTAAAACAAGACATCTGCTACTTCTGTaGTTGCAGTCATGGTCACTT +
Preference number: 4 (lower is better)
Translates to: RPYCCPVIAMLYPEPKTRHLLLL*LQSWSL
Trigger: AAGTGACCATGACTGCAACCACAGAAGTAGCAGATG...TCTTGTTTTAGGCTCCGGATAAAGCATGGCAATGACTGGGCAACAATAGGGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp ACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCTGTGACTATGTCACCTaGCTCAGTGCTTGTCAACTC +
Preference number: 4 (lower is better)
Translates to: TVSSAWDMEEVMSSVATVCDYVT*LSACQL
Trigger: GAGTTGACAAGCACTGAGCCAGGTGACATAGTCACA...GACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CTATCGACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCATGTGACTATGTCACCTaGCTCAGTGCTTGTCAACTC +
Preference number: 4 (lower is better)
Translates to: LSTVSSAWDMEEVMSSVACDYVT*LSACQL
Trigger: GAGTTGACAAGCACTGAGCCAGGTGACATAGTCACA...TGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTCGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GACTCATCTGAACTACAACCAGGCTTGAGAGGAGACAGTGCCATGTCTGATCTTTGTGACTATGTCACCTaGCTCAGTGCTTGTCAACTC +
Preference number: 4 (lower is better)
Translates to: DSSELQPGLRGDSAMSDLCDYVT*LSACQL
Trigger: GAGTTGACAAGCACTGAGCCAGGTGACATAGTCACA...AAGATCAGACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTCAGATGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ATTTCATCTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAATGGGTGATCTGGACTaGAATCTGCAATGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: ISSGKVSASRASGGSGKSMGDLD*NLQCCH
Trigger: ATGGCAGCATTGCAGATTCCAGTCCAGATCACCCAT...TGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTGAAACATGGGTGATCTaGACTGGAATCTGCAATGCT +
Preference number: 4 (lower is better)
Translates to: WSTIYFVAIVVNGHYSIPETWVI*TGICNA
Trigger: AGCATTGCAGATTCCAGTCCAGATCACCCATGTTTC...AGGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTCCAGTGGGCTGTAGATaGAAAGAGGGAAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCPVGCR*KEGRIS
Trigger: TGAGATTCTTCCCTCTTTCCATCTACAGCCCACTGG...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTGAATGATGACTCTTaGTGTGTGACACTGCACTGT +
Preference number: 4 (lower is better)
Translates to: TASNGLTKCTTTRPPPRSLNDDS*CVTLHC
Trigger: ACAGTGCAGTGTCACACACCAAGAGTCATCATTCAG...AGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTCAGCAGCAACAATGTGTGTaGCTTAAGGACTGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: STIYFVAIVVNGHYSIPQQQQCV*LKDCGY
Trigger: ATAGCCACAGTCCTTAAGCCACACACATTGTTGCTG...CTGAGGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTTCCCACTGCCAGCAATaGGTTAACCAAATGTACCAC +
Preference number: 4 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCSHCQQ*VNQMYH
Trigger: GTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGA...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTATTATCTTCTCCCACTGCCAGCAATaGGTTAACCAAATGTACCAC +
Preference number: 4 (lower is better)
Translates to: DWNLQCCHGARRDGCIIFSHCQQ*VNQMYH
Trigger: GTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGA...GAAGATAATACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp AATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGATGAGAGTGGCTGCAGCTaGAGTGAGCGAGCGCGACGA +
Preference number: 4 (lower is better)
Translates to: NVIFISYIKFCYPEDEIDESGCS*SERARR
Trigger: TCGTCGCGCTCGCTCACTCCAGCTGCAGCCACTCTC...ATCAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp CTGTGTGACTATGTCACCTGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCTTCTTCCCATTTGACTaGTTTGGAAGTTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LCDYVTWLSACQLMNHFCFFPFD*FGSCGQ
Trigger: CTGCCCACAACTTCCAAACCAGTCAAATGGGAAGAA...GCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACATAGTCACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp AGCCATTGTGGTGAACGGACACTACTCCATCCCTCAGCTAACAGATCCCAGTTATCAAATTTCCTGTTTTaGGTCCGGGCACTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: SHCGERTLLHPSANRSQLSNFLF*VRALWK
Trigger: CTTCCAAAGTGCCCGGACCCAAAACAGGAAATTTGA...TAACTGGGATCTGTTAGCTGAGGGATGGAGTAGTGTCCGTTCACCACAATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547146.6
CDS-3UTR TCA 90 bp TCCTTCATCAGTCGGCACCGATCTTTGACAGAAGATGCACTTCTTCCTAGCGCCGAATCATCAATACTCTaGTCATCCTCAGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: SFISRHRSLTEDALLPSAESSIL*SSSEDK
Trigger: TTTGTCCTCTGAGGATGATCAGAGTATTGATGATTC...GGCGCTAGGAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACTGATGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp GTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAGAAACATGGGTGATCTGGTGGAAGTGCAACAACTaGTATGCAAGGAGTAGAATC +
Preference number: 4 (lower is better)
Translates to: VSESTVAGESAEETWVIWWKCNN*YARSRI
Trigger: GATTCTACTCCTTGCATATCAGTTGTTGCACTTCCA...CCAGATCACCCATGTTTCTTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp CTGTGTGACTATGTCACCTGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCTGGAAGTGCAACAACTaGTATGCAAGGAGTAGAATC +
Preference number: 4 (lower is better)
Translates to: LCDYVTWLSACQLMNHFCWKCNN*YARSRI
Trigger: GATTCTACTCCTTGCATATCAGTTGTTGCACTTCCA...GCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACATAGTCACACAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp GAAGAAACATGGGTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGCTCTGATCATTTTCTaGAAGTGGAAGTGCAACAAC +
Preference number: 4 (lower is better)
Translates to: EETWVIWTGICNAAMGLEALIIF*KWKCNN
Trigger: GTTGTTGCACTTCCACTTTCAGAAAATGATCAGAGC...TTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCACCCATGTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTGCTTGGCTAACTGCTaGAACTTCCTCGTTACCCAA +
Preference number: 4 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNCLANC*NFLVTQ
Trigger: TTGGGTAACGAGGAAGTTTCAGCAGTTAGCCAAGCA...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTACGACATTGCTTTTCTaGGCGGGTACCGACTCGTTC +
Preference number: 4 (lower is better)
Translates to: LTKCTTTRPPPRSLYLYATTLLF*AGTDSF
Trigger: GAACGAGTCGGTACCCGCTCAGAAAAGCAATGTCGT...AGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAACGACATTGCTTTTCTaGGCGGGTACCGACTCGTTC +
Preference number: 4 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLTTLLF*AGTDSF
Trigger: GAACGAGTCGGTACCCGCTCAGAAAAGCAATGTCGT...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGACGACATTGCTTTTCTaGGCGGGTACCGACTCGTTC +
Preference number: 4 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMTTLLF*AGTDSF
Trigger: GAACGAGTCGGTACCCGCTCAGAAAAGCAATGTCGT...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACCTGAAGAAACATGGGTaGTCTGGACTGGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNLKKHG*SGLESA
Trigger: TGCAGATTCCAGTCCAGATCACCCATGTTTCTTCAG...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTGGGATATGGAAGAAGTaGTGTCCTCTGTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: PLGGCSYFFEEVVINSVPGIWKK*CPLWQQ
Trigger: CTGTTGCCACAGAGGACATCACTTCTTCCATATCCC...AGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCTGAATGATGGGATATGGAAGAAGTaGTGTCCTCTGTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: FCLGYGRSDVLCGNSLNDGIWKK*CPLWQQ
Trigger: CTGTTGCCACAGAGGACATCACTTCTTCCATATCCC...ATCATTCAGACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGGGATATGGAAGAAGTaGTGTCCTCTGTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYGIWKK*CPLWQQ
Trigger: CTGTTGCCACAGAGGACATCACTTCTTCCATATCCC...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ATTATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTGGAATTGGTAACTACAACCAGGCTTaGGAGGAGACAGTGCCATGT +
Preference number: 4 (lower is better)
Translates to: IIFQAGNSYLNMLHTGIGNYNQA*EETVPC
Trigger: ACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTT...ACCAATTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp GTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAGAAACATGGGTGATCTGGTTGAAAAGACTCATCTaGACTACAACCAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: VSESTVAGESAEETWVIWLKRLI*TTTRLE
Trigger: CTCAAGCCTGGTTGTAGTTCAGATGAGTCTTTTCAA...CCAGATCACCCATGTTTCTTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GCAATTTGCCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGTGGTTTCTGAGGGGGTaGAAACTGCTTAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: AICLLMVHHLLRSHCGERWFLRG*KLLRFW
Trigger: CCAGAATCTAAGCAGTTTTCACCCCCTCAGAAACCA...CCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp CAGTCAGAGTTAGGGGAAGGCCTTGGCTTGAGCTTGTTTGAAGTAGGTAGGTGCAACACACTAAGTGGATaGCAAACTATTCTCTCGGTA +
Preference number: 4 (lower is better)
Translates to: QSELGEGLGLSLFEVGRCNTLSG*QTILSV
Trigger: TACCGAGAGAATAGTTTGTCATCCACTTAGTGTGTT...GCACCTACCTACTTCAAACAAGCTCAAGCCAAGGCCTTCCCCTAACTCTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CTGTGTGACTATGTCACCTGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCTGGGCAGCAATACTTTaGGAGCCAAAGTTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: LCDYVTWLSACQLMNHFCWAAIL*EPKFES
Trigger: ACTTTCAAACTTTGGCTCTCAAAGTATTGCTGCCCA...GCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACATAGTCACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp ACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCCTTCTTCTTCCCATTTaGCTGGTTTGGAAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: TVSSAWDMEEVMSSVATVLLLPI*LVWKLW
Trigger: CCACAACTTCCAAACCAGTCAAATGGGAAGAAGAAG...GACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR TCA 90 bp CCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCCTTCTTCTTCCCATTTaGCTGGTTTGGAAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: PNVPPQDHLLGLYTCMLVLLLPI*LVWKLW
Trigger: CCACAACTTCCAAACCAGTCAAATGGGAAGAAGAAG...GACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR GCA 90 bp CCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTCCCACAGAATCAAGTTaGCTTCCCTTAGCAACCAGC +
Preference number: 4 (lower is better)
Translates to: PLGGCSYFFEEVVINSVPPTESS*LPLATS
Trigger: GCTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGG...AGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCAATCCTCTTCCACTGTaGTCATACTCAAATCTAGAC +
Preference number: 4 (lower is better)
Translates to: ISSHCQQWVNQMYHHKTTNPLPL*SYSNLD
Trigger: GTCTAGATTTGAGTATGAGCACAGTGGAAGAGGATT...GGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTTGCTACTTCTGTGGTTaGAGTCATGGTCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: WSTIYFVAIVVNGHYSIPCYFCG*SHGHFK
Trigger: TTTGAAGTGACCATGACTGCAACCACAGAAGTAGCA...AGGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp TCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTCAGTGCTACTTCTGTGGTTaGAGTCATGGTCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: STIYFVAIVVNGHYSIPQCYFCG*SHGHFK
Trigger: TTTGAAGTGACCATGACTGCAACCACAGAAGTAGCA...CTGAGGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp GAAGAAACATGGGTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAAAGTAACCTCATCATCTaGTACTTCTGTGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: EETWVIWTGICNAAMGLESNLII*YFCGCS
Trigger: ACTGCAACCACAGAAGTAGCAGATGATGAGGTTACT...TTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCACCCATGTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TGTCCACTTCCCTGTGTTGCAAGTATCCTTCATCAGTCGGCACCGATCTTTGACTTGGACCACATCCCCTaGTTCCATTTATGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: CPLPCVASILHQSAPIFDLDHIP*FHLCPL
Trigger: TAAAGGACATAAATGGAAGCAGGGGATGTGGTCCAA...GTCAAAGATCGGTGCCGACTGATGAAGGATACTTGCAACACAGGGAAGTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp TCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAAGCCCAGTCATTGCCATaGTTTATCCGGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SHVTLNRDLCLKLPASTQAQSLP*FIRSSL
Trigger: CAAGGAGCTCCGGATAAAGCATGGCAATGACTGGGC...TTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000547146.6
ENST00000579850.5
CDS-3UTR GCA 90 bp TGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCCGCCGCCCCTATTGTTaGCCAGTCATTGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: WSSLKLSLLEDQKITGKLRRPYC*PVIAML
Trigger: AAGCATGGCAATGACTGGGCAACAATAGGGGCGGCG...GAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCGCCGCCCCTATTGTTaGCCAGTCATTGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLRRPYC*PVIAML
Trigger: AAGCATGGCAATGACTGGGCAACAATAGGGGCGGCG...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTGTCACCTGGCTCAGTaGTTGTCAACTCATGAACCA +
Preference number: 4 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNCHLAQ*LSTHEP
Trigger: TGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACA...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAACATTTAGAACGACATTaGTTTTCTGAGCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: PPQDHLLGLYTCMLVKSQHLERH*FSERVP
Trigger: CGGTACCCGCTCAGAAAAGCAATGTCGTTCTAAATG...TTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGACTGGAATCTGCAATaGTGCCATGGGGCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYDWNLQ*CHGARR
Trigger: TCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATATCTGGACTGGAATCTaGAATGCTGCCATGGGGCTA +
Preference number: 4 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYIWTGI*NAAMGL
Trigger: TAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGAT...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GAAGAAACATGGGTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAAATCGACTGTCAGTTCTaGTTGGGATATGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: EETWVIWTGICNAAMGLEIDCQF*LGYGRS
Trigger: ACTTCTTCCATATCCCAAGCAGAACTGACAGTCGAT...TTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCACCCATGTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTAATCTATAACATCAGATaGCTGGATAAAGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: VIWTGICNAAMGLEEMAVIYNIR*LDKAMW
Trigger: CCACATGGCTTTATCCAGGCATCTGATGTTATAGAT...TACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GGTGATGAATTTCATCTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGAGCTACATCAAGTTCTaGTATCCTGTTCTGTGGATA +
Preference number: 4 (lower is better)
Translates to: GDEFHLGKCLLLGRLEAQSYIKF*YPVLWI
Trigger: TATCCACAGAACAGGATAGCAGAACTTGATGTAGCT...CTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAATTCATCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547146.6
CDS-3UTR CCA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACAACACTTTCCTGTTTTaGGTCCGGGCACTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYNTFLF*VRALWK
Trigger: CTTCCAAAGTGCCCGGACCCAAAACAGGAAAGTGTT...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331242.12
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCCTGTGGTTGCAGTCATaGTCACTTCAAAGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: TVSSAWDMEEVMSSVATVLWLQS*SLQSSD
Trigger: ATCAGAGCTTTGAAGTGACCATGACTGCAACCACAG...GACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTATTATCTTCCATCTGCTACTTCTGTaGTTGCAGTCATGGTCACTT +
Preference number: 4 (lower is better)
Translates to: DWNLQCCHGARRDGCIIFHLLLL*LQSWSL
Trigger: AAGTGACCATGACTGCAACCACAGAAGTAGCAGATG...GAAGATAATACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCCATCTGCTACTTCTGTaGTTGCAGTCATGGTCACTT +
Preference number: 4 (lower is better)
Translates to: PNVPPQDHLLGLYTCMLVHLLLL*LQSWSL
Trigger: AAGTGACCATGACTGCAACCACAGAAGTAGCAGATG...GACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAGAAACATGGGTGATCTGGGTTGTAAACCATGCTTaGCTAACTGCTGAAACTTCC +
Preference number: 4 (lower is better)
Translates to: VSESTVAGESAEETWVIWVVNHA*LTAETS
Trigger: GGAAGTTTCAGCAGTTAGCCAAGCATGGTTTACAAC...CCAGATCACCCATGTTTCTTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GACTCATCTGAACTACAACCAGGCTTGAGAGGAGACAGTGCCATGTCTGATCTTTATCAATTTCTTCCTTaGACCACATCCCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: DSSELQPGLRGDSAMSDLYQFLP*TTSPAS
Trigger: GGAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATA...AAGATCAGACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTCAGATGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAGATGACTGAATATCACTATCAATTTCTTCCTTaGACCACATCCCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: CLLLGRLEAQENQMTEYHYQFLP*TTSPAS
Trigger: GGAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATA...GTGATATTCAGTCATCTGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GAAGAAACATGGGTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGCTGCACACTGGAATTaGTATTACTGTTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: EETWVIWTGICNAAMGLEAAHWN*YYCLEL
Trigger: GAGTTCCAAACAGTAATACCAATTCCAGTGTGCAGC...TTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCACCCATGTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACATGGGTGATCTGGACTaGAATCTGCAATGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNMGDLD*NLQCCH
Trigger: ATGGCAGCATTGCAGATTCCAGTCCAGATCACCCAT...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ATTTCATCTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAGAAACATGGGTGATCTaGACTGGAATCTGCAATGCT +
Preference number: 4 (lower is better)
Translates to: ISSGKVSASRASGGSGKSETWVI*TGICNA
Trigger: AGCATTGCAGATTCCAGTCCAGATCACCCATGTTTC...TGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTATTATCTTCGAAACATGGGTGATCTaGACTGGAATCTGCAATGCT +
Preference number: 4 (lower is better)
Translates to: DWNLQCCHGARRDGCIIFETWVI*TGICNA
Trigger: AGCATTGCAGATTCCAGTCCAGATCACCCATGTTTC...GAAGATAATACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GATGGCTGTATTATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTCCAGTGGGCTGTAGATaGAAAGAGGGAAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: DGCIIFQAGNSYLNMLHTPVGCR*KEGRIS
Trigger: TGAGATTCTTCCCTCTTTCCATCTACAGCCCACTGG...AGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGATAATACAGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp TGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTGCCTGGAGTGCCAGTaGGCTGTAGATGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: WSSLKLSLLEDQKITGKLCLECQ*AVDGKR
Trigger: CCTCTTTCCATCTACAGCCCACTGGCACTCCAGGCA...GAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TTAAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGCCTGGAGTGCCAGTaGGCTGTAGATGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LKLPASTQLHTVIKLNLRCLECQ*AVDGKR
Trigger: CCTCTTTCCATCTACAGCCCACTGGCACTCCAGGCA...TCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTTGCCTGGAGTGCCAGTaGGCTGTAGATGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTCLECQ*AVDGKR
Trigger: CCTCTTTCCATCTACAGCCCACTGGCACTCCAGGCA...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTCTGAATGATGACTCTTaGTGTGTGACACTGCACTGT +
Preference number: 4 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCLNDDS*CVTLHC
Trigger: ACAGTGCAGTGTCACACACCAAGAGTCATCATTCAG...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCCAGCAACAATGTGTGTaGCTTAAGGACTGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: PNVPPQDHLLGLYTCMLVQQQCV*LKDCGY
Trigger: ATAGCCACAGTCCTTAAGCCACACACATTGTTGCTG...GACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAACAGCAACAATGTGTGTaGCTTAAGGACTGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: PPQDHLLGLYTCMLVKSQQQQCV*LKDCGY
Trigger: ATAGCCACAGTCCTTAAGCCACACACATTGTTGCTG...TTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTATTATCTTCTTCTTCCCATTTGACTaGTTTGGAAGTTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: DWNLQCCHGARRDGCIIFFFPFD*FGSCGQ
Trigger: CTGCCCACAACTTCCAAACCAGTCAAATGGGAAGAA...GAAGATAATACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp CCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGATTCTTCCCATTTGACTaGTTTGGAAGTTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PKSAPTASNGLTKCTTTRFFPFD*FGSCGQ
Trigger: CTGCCCACAACTTCCAAACCAGTCAAATGGGAAGAA...TCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR TCA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATTTCCCTTCTGTGTCCTaGGTCAAAGTCACAGAGTTC +
Preference number: 4 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYFPSVS*VKVTEF
Trigger: GAACTCTGTGACTTTGACTCAGGACACAGAAGGGAA...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CCACTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAATTCCCTTCTGTGTCCTaGGTCAAAGTCACAGAGTTC +
Preference number: 4 (lower is better)
Translates to: PLFSVIVSESTVAGESAEFPSVS*VKVTEF
Trigger: GAACTCTGTGACTTTGACTCAGGACACAGAAGGGAA...TTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
ENST00000584619.5
CDS-3UTR TCA 90 bp TGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTGAATCATCAATACTCTaGTCATCCTCAGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: WSTIYFVAIVVNGHYSIPESSIL*SSSEDK
Trigger: TTTGTCCTCTGAGGATGATCAGAGTATTGATGATTC...AGGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp CCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAATGGAAGTGCAACAACTaGTATGCAAGGAGTAGAATC +
Preference number: 4 (lower is better)
Translates to: PPQDHLLGLYTCMLVKSQWKCNN*YARSRI
Trigger: GATTCTACTCCTTGCATATCAGTTGTTGCACTTCCA...TTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp CATTGTGGTGAACGGACACTACTCCATCCCTCAGCTAACAGATCCCAGTTAATGTGGAAGTGCAACAACTaGTATGCAAGGAGTAGAATC +
Preference number: 4 (lower is better)
Translates to: HCGERTLLHPSANRSQLMWKCNN*YARSRI
Trigger: GATTCTACTCCTTGCATATCAGTTGTTGCACTTCCA...CATTAACTGGGATCTGTTAGCTGAGGGATGGAGTAGTGTCCGTTCACCACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTGCTCTGATCATTTTCTaGAAGTGGAAGTGCAACAAC +
Preference number: 4 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCALIIF*KWKCNN
Trigger: GTTGTTGCACTTCCACTTTCAGAAAATGATCAGAGC...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp ACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAGCTCTGATCATTTTCTaGAAGTGGAAGTGCAACAAC +
Preference number: 4 (lower is better)
Translates to: TTTRPPPRSLYLYAGQVSALIIF*KWKCNN
Trigger: GTTGTTGCACTTCCACTTTCAGAAAATGATCAGAGC...TGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp TTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGTCGGCACCGATCTTTaGCAGAAGATGCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: LTKCTTTRPPPRSLYLYAVGTDL*QKMHFF
Trigger: GAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGAC...AGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGGTCGGCACCGATCTTTaGCAGAAGATGCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMVGTDL*QKMHFF
Trigger: GAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGAC...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAGAAGTCGGCACCGATCTTTaGCAGAAGATGCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: LFSVIVSESTVAGESAEEVGTDL*QKMHFF
Trigger: GAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGAC...TTCTTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGTGCTTGTCAACTCATaGACCACTTCTGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYVLVNS*TTSASL
Trigger: GAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCAC...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ATTATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTGGAATTGGTGTGCTTGTCAACTCATaGACCACTTCTGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: IIFQAGNSYLNMLHTGIGVLVNS*TTSASL
Trigger: GAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCAC...ACCAATTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp CCAGTTAATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGACGACATTGCTTTTCTaGGCGGGTACCGACTCGTTC +
Preference number: 4 (lower is better)
Translates to: PVNVIFISYIKFCYPEDETTLLF*AGTDSF
Trigger: GAACGAGTCGGTACCCGCTCAGAAAAGCAATGTCGT...CTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATTAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp CTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAGAACGGGCAACTCTTATCTaGACATGCTGCACACTGGAA +
Preference number: 4 (lower is better)
Translates to: LFSVIVSESTVAGESAEERATLI*TCCTLE
Trigger: TTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCG...TTCTTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATCTGAAGAAACATGGGTaGTCTGGACTGGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYLKKHG*SGLESA
Trigger: TGCAGATTCCAGTCCAGATCACCCATGTTTCTTCAG...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CGCCCCTATTGTTGCCCAGTCATTGCCATGCTTTATCCGGAGCCTAAAACAAGATCTGGGGATAAAGCATaGACAATAATCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RPYCCPVIAMLYPEPKTRSGDKA*TIICSG
Trigger: TCCTGAACAGATTATTGTTCATGCTTTATCCCCAGA...TCTTGTTTTAGGCTCCGGATAAAGCATGGCAATGACTGGGCAACAATAGGGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR TCA 90 bp ACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAATGACTCTTGGTGTGTaGCACTGCACTGTAACATTA +
Preference number: 4 (lower is better)
Translates to: TTTRPPPRSLYLYAGQVSMTLGV*HCTVTL
Trigger: TAATGTTACAGTGCAGTGTCACACACCAAGAGTCAT...TGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ATTTCATCTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAATGACTCTTGGTGTGTaGCACTGCACTGTAACATTA +
Preference number: 4 (lower is better)
Translates to: ISSGKVSASRASGGSGKSMTLGV*HCTVTL
Trigger: TAATGTTACAGTGCAGTGTCACACACCAAGAGTCAT...TGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CCACTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAATCTGTGGCAACAGTCTaGATGATGACTCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: PLFSVIVSESTVAGESAESVATV*MMTLGV
Trigger: CACACCAAGAGTCATCATTCAGACTGTTGCCACAGA...TTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTGTGGCAACAGTCTaGATGATGACTCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: PLGGCSYFFEEVVINSVPSVATV*MMTLGV
Trigger: CACACCAAGAGTCATCATTCAGACTGTTGCCACAGA...AGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAAGGGATATGGAAGAAGTaGTGTCCTCTGTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: SHVTLNRDLCLKLPASTQGIWKK*CPLWQQ
Trigger: CTGTTGCCACAGAGGACATCACTTCTTCCATATCCC...TTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TCTTCTTCTGTCCACTTCCCTGTGTTGCAAGTATCCTTCATCAGTCGGCACCGAGGAAAATCAGATGACTaGATATCACTATCGACTGTC +
Preference number: 4 (lower is better)
Translates to: SSSVHFPVLQVSFISRHRGKSDD*ISLSTV
Trigger: GACAGTCGATAGTGATATTCAGTCATCTGATTTTCC...TCGGTGCCGACTGATGAAGGATACTTGCAACACAGGGAAGTGGACAGAAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR TCA 90 bp ATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCCTGAATTTGGATACATaGGCATCATTAAATGATGGC +
Preference number: 4 (lower is better)
Translates to: ISSHCQQWVNQMYHHKTTLNLDT*ASLNDG
Trigger: GCCATCATTTAATGATGCTCATGTATCCAAATTCAG...GGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAAACTACAACCAGGCTTaGGAGGAGACAGTGCCATGT +
Preference number: 4 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLNYNQA*EETVPC
Trigger: ACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTT...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGATTGAAAAGACTCATCTaGACTACAACCAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: PKSAPTASNGLTKCTTTRLKRLI*TTTRLE
Trigger: CTCAAGCCTGGTTGTAGTTCAGATGAGTCTTTTCAA...TCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTTTGAAAAGACTCATCTaGACTACAACCAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCLKRLI*TTTRLE
Trigger: CTCAAGCCTGGTTGTAGTTCAGATGAGTCTTTTCAA...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCATTGAAAAGACTCATCTaGACTACAACCAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: TTTRPPPRSLYLYAGQVSLKRLI*TTTRLE
Trigger: CTCAAGCCTGGTTGTAGTTCAGATGAGTCTTTTCAA...TGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCTGAATGATTGGTTTCTGAGGGGGTaGAAACTGCTTAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: FCLGYGRSDVLCGNSLNDWFLRG*KLLRFW
Trigger: CCAGAATCTAAGCAGTTTTCACCCCCTCAGAAACCA...ATCATTCAGACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp AGCCATTGTGGTGAACGGACACTACTCCATCCCTCAGCTAACAGATCCCAGTTAAACACACTAAGTGGATaGCAAACTATTCTCTCGGTA +
Preference number: 4 (lower is better)
Translates to: SHCGERTLLHPSANRSQLNTLSG*QTILSV
Trigger: TACCGAGAGAATAGTTTGTCATCCACTTAGTGTGTT...TAACTGGGATCTGTTAGCTGAGGGATGGAGTAGTGTCCGTTCACCACAATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR GCA 90 bp TTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTCCCACAGAATCAAGTTaGCTTCCCTTAGCAACCAGC +
Preference number: 4 (lower is better)
Translates to: LTKCTTTRPPPRSLYLYAPTESS*LPLATS
Trigger: GCTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGG...AGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TGCCCAGTCATTGCCATGCTTTATCCGGAGCCTAAAACAAGAGTCTGCCAATCATGCTACTTCTGTGGTTaGAGTCATGGTCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: CPVIAMLYPEPKTRVCQSCYFCG*SHGHFK
Trigger: TTTGAAGTGACCATGACTGCAACCACAGAAGTAGCA...TGATTGGCAGACTCTTGTTTTAGGCTCCGGATAAAGCATGGCAATGACTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTAGTAACCTCATCATCTaGTACTTCTGTGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCSNLII*YFCGCS
Trigger: ACTGCAACCACAGAAGTAGCAGATGATGAGGTTACT...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAAGTAACCTCATCATCTaGTACTTCTGTGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: PPQDHLLGLYTCMLVKSQSNLII*YFCGCS
Trigger: ACTGCAACCACAGAAGTAGCAGATGATGAGGTTACT...TTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCTTGGACCACATCCCCTaGTTCCATTTATGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: PNVPPQDHLLGLYTCMLVLDHIP*FHLCPL
Trigger: TAAAGGACATAAATGGAAGCAGGGGATGTGGTCCAA...GACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTTTGGACCACATCCCCTaGTTCCATTTATGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCLDHIP*FHLCPL
Trigger: TAAAGGACATAAATGGAAGCAGGGGATGTGGTCCAA...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CTATCGACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCATTGGACCACATCCCCTaGTTCCATTTATGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: LSTVSSAWDMEEVMSSVALDHIP*FHLCPL
Trigger: TAAAGGACATAAATGGAAGCAGGGGATGTGGTCCAA...TGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTCGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAGATGACTGAATATCACCACTCTTCTATAAACTaGAAACAAAGGCCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: CLLLGRLEAQENQMTEYHHSSIN*KQRPVQ
Trigger: CTGAACCGGCCTTTGTTTGCAGTTTATAGAAGAGTG...GTGATATTCAGTCATCTGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CATTGTGGTGAACGGACACTACTCCATCCCTCAGCTAACAGATCCCAGTTAATGCACTCTTCTATAAACTaGAAACAAAGGCCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: HCGERTLLHPSANRSQLMHSSIN*KQRPVQ
Trigger: CTGAACCGGCCTTTGTTTGCAGTTTATAGAAGAGTG...CATTAACTGGGATCTGTTAGCTGAGGGATGGAGTAGTGTCCGTTCACCACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp GACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCACTCTTCTATAAACTaGAAACAAAGGCCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: DCQFCLGYGRSDVLCGNSHSSIN*KQRPVQ
Trigger: CTGAACCGGCCTTTGTTTGCAGTTTATAGAAGAGTG...ACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTAAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGAGCCCAGTCATTGCCATaGTTTATCCGGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LKLPASTQLHTVIKLNLRAQSLP*FIRSSL
Trigger: CAAGGAGCTCCGGATAAAGCATGGCAATGACTGGGC...TCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000547146.6
ENST00000579850.5
CDS-3UTR GCA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACCATTTAGAACGACATTaGTTTTCTGAGCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYHLERH*FSERVP
Trigger: CGGTACCCGCTCAGAAAAGCAATGTCGTTCTAAATG...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ATGCACTTCTTCCTAGCGCCGCCCCTATTGTTGCCCAGTCATTGCCATGCTTTATTATGGTTTGCAATTTaGCTTTTGATGGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: MHFFLAPPLLLPSHCHALLWFAI*LLMVHH
Trigger: ATGGTGGACCATCAAAAGGCAAATTGCAAACCATAA...TAAAGCATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAGGAAGAAGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp GGTGATGAATTTCATCTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGTTATGGTTTGCAATTTaGCTTTTGATGGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: GDEFHLGKCLLLGRLEAQLWFAI*LLMVHH
Trigger: ATGGTGGACCATCAAAAGGCAAATTGCAAACCATAA...CTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAATTCATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAACATCCTTATGGTTTaGAATTTGCCTTTTGATGGT +
Preference number: 4 (lower is better)
Translates to: APTASNGLTKCTTTRPPPNILMV*NLPFDG
Trigger: ACCATCAAAAGGCAAATTGCAAACCATAAGGATGTT...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTGGTAGGTGCCTGGAGTaGCAGTGGGCTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: FFEEVVINSVPSLLELPIGRCLE*QWAVDG
Trigger: TCCATCTACAGCCCACTGGCACTCCAGGCACCTACC...AATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTATCTATAACATCAGATaGCTGGATAAAGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: WSTIYFVAIVVNGHYSIPIYNIR*LDKAMW
Trigger: CCACATGGCTTTATCCAGGCATCTGATGTTATAGAT...AGGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR GCA 90 bp ACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTACAGTGTGCCTTCTTTaGTTGAACTGCCTATTTCTA +
Preference number: 4 (lower is better)
Translates to: TASNGLTKCTTTRPPPRSTVCLL*LNCLFL
Trigger: TAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGT...AGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTTTGTGCTTTCTACTCTaGAGCCTGAGCCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSLCFLL*SLSHGH
Trigger: GTGCCCGTGGCTCAGGCTGCAGAGTAGAAAGCACAA...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394703.9
CDS-3UTR GCA 90 bp TTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTTTGTTGCCCAGTCATTaGCATGCTTTATCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LTKCTTTRPPPRSLYLYALLPSH*HALSGA
Trigger: GGCTCCGGATAAAGCATGGCAATGACTGGGCAACAA...AGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTTGGGTCCGGGCACTTTaGAAGAACCAGGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSWVRAL*KNQDGS
Trigger: GCTTCCATCCTGGTTCTTCCAAAGTGCCCGGACCCA...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GATGAGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCAAATCTAGACAACGGATaGATCAGCTACAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: DEIDFIFLGPFSTPTLFPNLDNG*ISYSPS
Trigger: GGAAGGGCTGTAGCTGATCCATCCGTTGTCTAGATT...TGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp AGGATGAGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCAATCTAGACAACGGATaGATCAGCTACAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: RMRLISSSLVHSVPPLCFNLDNG*ISYSPS
Trigger: GGAAGGGCTGTAGCTGATCCATCCGTTGTCTAGATT...GAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCTCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTGTTGTAAACCATGCTTaGCTAACTGCTGAAACTTCC +
Preference number: 4 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCVVNHA*LTAETS
Trigger: GGAAGTTTCAGCAGTTAGCCAAGCATGGTTTACAAC...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTATTATCTTCGTTGTAAACCATGCTTaGCTAACTGCTGAAACTTCC +
Preference number: 4 (lower is better)
Translates to: DWNLQCCHGARRDGCIIFVVNHA*LTAETS
Trigger: GGAAGTTTCAGCAGTTAGCCAAGCATGGTTTACAAC...GAAGATAATACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCAAGTCTCTTTTCTTCTTCTGTGACTATGTCACCTaGCTCAGTGCTTGTCAACTC +
Preference number: 4 (lower is better)
Translates to: WLSACQLMNHFCKSLFFFCDYVT*LSACQL
Trigger: GAGTTGACAAGCACTGAGCCAGGTGACATAGTCACA...GAAGAAGAAAAGAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp CCCTGTGTTGCAAGTATCCTTCATCAGTCGGCACCGATCTTTGACAGAAGATGCGAACATGCTGCACACTaGAATTGGTATTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: PCVASILHQSAPIFDRRCEHAAH*NWYYCL
Trigger: CAAACAGTAATACCAATTCCAGTGTGCAGCATGTTC...GCATCTTCTGTCAAAGATCGGTGCCGACTGATGAAGGATACTTGCAACACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp AGGATGAGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCATGGGTGATCTGGACTaGAATCTGCAATGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RMRLISSSLVHSVPPLCFMGDLD*NLQCCH
Trigger: ATGGCAGCATTGCAGATTCCAGTCCAGATCACCCAT...GAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCTCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACGAAACATGGGTGATCTaGACTGGAATCTGCAATGCT +
Preference number: 4 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYETWVI*TGICNA
Trigger: AGCATTGCAGATTCCAGTCCAGATCACCCATGTTTC...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTGGAATTGGTATTCCAGTGGGCTGTAGATaGAAAGAGGGAAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: IFQAGNSYLNMLHTGIGIPVGCR*KEGRIS
Trigger: TGAGATTCTTCCCTCTTTCCATCTACAGCCCACTGG...AATACCAATTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp CCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATTGCCTGGAGTGCCAGTaGGCTGTAGATGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PQQLSFRDSKLFLVAEVNCLECQ*AVDGKR
Trigger: CCTCTTTCCATCTACAGCCCACTGGCACTCCAGGCA...ATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGTTCTGTGCTATTTTaGTCACTGAATTTGGATACA +
Preference number: 4 (lower is better)
Translates to: APTASNGLTKCTTTRPPPSSVLF*SLNLDT
Trigger: TGTATCCAAATTCAGTGACCAAAATAGCACAGAACT...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCTGAATGATTCCCACTGCCAGCAATaGGTTAACCAAATGTACCAC +
Preference number: 4 (lower is better)
Translates to: FCLGYGRSDVLCGNSLNDSHCQQ*VNQMYH
Trigger: GTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGA...ATCATTCAGACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GGTGATGAATTTCATCTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGCTGCTTAGATTCTGGTaGGTTTTGTTACTATGCTTA +
Preference number: 4 (lower is better)
Translates to: GDEFHLGKCLLLGRLEAQLLRFW*VLLLCL
Trigger: TAAGCATAGTAACAAAACCCACCAGAATCTAAGCAG...CTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAATTCATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCGAATATAGCATCTCATaGCTAGACAACGGATGGATC +
Preference number: 4 (lower is better)
Translates to: TVSSAWDMEEVMSSVATVEYSIS*LDNGWI
Trigger: GATCCATCCGTTGTCTAGCCATGAGATGCTATATTC...GACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412139.6
CDS-3UTR TCA 90 bp AGACACACCCTGTGTGACTATGTCACCTGGCTCAGTGCTTGTCAACTCATGAACTTCAATACTATCTTCTaGGTCTATTTCATCCGCTTC +
Preference number: 4 (lower is better)
Translates to: RHTLCDYVTWLSACQLMNFNTIF*VYFIRF
Trigger: GAAGCGGATGAAATAGACTCAGAAGATAGTATTGAA...GTTCATGAGTTGACAAGCACTGAGCCAGGTGACATAGTCACACAGGGTGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp GACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTATTATCTTCGAATCATCAATACTCTaGTCATCCTCAGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: DWNLQCCHGARRDGCIIFESSIL*SSSEDK
Trigger: TTTGTCCTCTGAGGATGATCAGAGTATTGATGATTC...GAAGATAATACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp ACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAGAATCATCAATACTCTaGTCATCCTCAGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: TTTRPPPRSLYLYAGQVSESSIL*SSSEDK
Trigger: TTTGTCCTCTGAGGATGATCAGAGTATTGATGATTC...TGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTGGAAGTGCAACAACTaGTATGCAAGGAGTAGAATC +
Preference number: 4 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYWKCNN*YARSRI
Trigger: GATTCTACTCCTTGCATATCAGTTGTTGCACTTCCA...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp ACCAAATCTTCGACATCCTTTGAATCTTCTGAAACAGGACTGCCCAAGGATGATTGCTTGGCTAACTGCTaGAACTTCCTCGTTACCCAA +
Preference number: 4 (lower is better)
Translates to: TKSSTSFESSETGLPKDDCLANC*NFLVTQ
Trigger: TTGGGTAACGAGGAAGTTTCAGCAGTTAGCCAAGCA...ATCATCCTTGGGCAGTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCGTCGGCACCGATCTTTaGCAGAAGATGCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLVGTDL*QKMHFF
Trigger: GAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGAC...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGGTGCTTGTCAACTCATaGACCACTTCTGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMVLVNS*TTSASL
Trigger: GAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCAC...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp AGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCAATTCGTGCTTGTCAACTCATaGACCACTTCTGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: RLISSSLVHSVPPLCFQFVLVNS*TTSASL
Trigger: GAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCAC...GAATTGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp CTGGAATTGGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCTCCAAAAGCACGACATTGCTTTTCTaGGCGGGTACCGACTCGTTC +
Preference number: 4 (lower is better)
Translates to: LELVLLFGTPDPDLFSKSTTLLF*AGTDSF
Trigger: GAACGAGTCGGTACCCGCTCAGAAAAGCAATGTCGT...GCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAATTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp CCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGATCTGGGGATAAAGCATaGACAATAATCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: PKSAPTASNGLTKCTTTRSGDKA*TIICSG
Trigger: TCCTGAACAGATTATTGTTCATGCTTTATCCCCAGA...TCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAATCTGGGGATAAAGCATaGACAATAATCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: PPQDHLLGLYTCMLVKSQSGDKA*TIICSG
Trigger: TCCTGAACAGATTATTGTTCATGCTTTATCCCCAGA...TTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACTTCTGTGGCAACAGTCTaGATGATGACTCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: PCNTKQGFMLKTPSLHSTSVATV*MMTLGV
Trigger: CACACCAAGAGTCATCATTCAGACTGTTGCCACAGA...AGTTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAGGAAAATCAGATGACTaGATATCACTATCGACTGTC +
Preference number: 4 (lower is better)
Translates to: PPQDHLLGLYTCMLVKSQGKSDD*ISLSTV
Trigger: GACAGTCGATAGTGATATTCAGTCATCTGATTTTCC...TTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAGATGACTGAATATCACGGAAAATCAGATGACTaGATATCACTATCGACTGTC +
Preference number: 4 (lower is better)
Translates to: CLLLGRLEAQENQMTEYHGKSDD*ISLSTV
Trigger: GACAGTCGATAGTGATATTCAGTCATCTGATTTTCC...GTGATATTCAGTCATCTGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCGGAAAATCAGATGACTaGATATCACTATCGACTGTC +
Preference number: 4 (lower is better)
Translates to: TVSSAWDMEEVMSSVATVGKSDD*ISLSTV
Trigger: GACAGTCGATAGTGATATTCAGTCATCTGATTTTCC...GACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTGATAAAGCCATGTGGTaGAGGAACGATAAGTATTGT +
Preference number: 4 (lower is better)
Translates to: DCQFCLGYGRSDVLCGNSDKAMW*RNDKYC
Trigger: ACAATACTTATCGTTCCTTCACCACATGGCTTTATC...ACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTGATAAAGCCATGTGGTaGAGGAACGATAAGTATTGT +
Preference number: 4 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCDKAMW*RNDKYC
Trigger: ACAATACTTATCGTTCCTTCACCACATGGCTTTATC...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CTATCGACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAGATAAAGCCATGTGGTaGAGGAACGATAAGTATTGT +
Preference number: 4 (lower is better)
Translates to: LSTVSSAWDMEEVMSSVADKAMW*RNDKYC
Trigger: ACAATACTTATCGTTCCTTCACCACATGGCTTTATC...TGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTCGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCCCAAGGATGATCCAATaGTATTTGATTCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: MVHHLLRSHCGERTLLHPPRMIQ*YLILPD
Trigger: ATCAGGAAGAATCAAATATCATTGGATCATCCTTGG...GGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCAACTACAACCAGGCTTaGGAGGAGACAGTGCCATGT +
Preference number: 4 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLNYNQA*EETVPC
Trigger: ACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTT...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GCAATTTGCCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGTTGAAAAGACTCATCTaGACTACAACCAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: AICLLMVHHLLRSHCGERLKRLI*TTTRLE
Trigger: CTCAAGCCTGGTTGTAGTTCAGATGAGTCTTTTCAA...CCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGAAAAGACTCATCTaGACTACAACCAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYLKRLI*TTTRLE
Trigger: CTCAAGCCTGGTTGTAGTTCAGATGAGTCTTTTCAA...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAACACACTAAGTGGATaGCAAACTATTCTCTCGGTA +
Preference number: 4 (lower is better)
Translates to: PNVPPQDHLLGLYTCMLVNTLSG*QTILSV
Trigger: TACCGAGAGAATAGTTTGTCATCCACTTAGTGTGTT...GACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TGCCCAGTCATTGCCATGCTTTATCCGGAGCCTAAAACAAGAGTCTGCCAATCAAACACACTAAGTGGATaGCAAACTATTCTCTCGGTA +
Preference number: 4 (lower is better)
Translates to: CPVIAMLYPEPKTRVCQSNTLSG*QTILSV
Trigger: TACCGAGAGAATAGTTTGTCATCCACTTAGTGTGTT...TGATTGGCAGACTCTTGTTTTAGGCTCCGGATAAAGCATGGCAATGACTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR TCA 90 bp CATTGTGGTGAACGGACACTACTCCATCCCTCAGCTAACAGATCCCAGTTAATGAACACACTAAGTGGATaGCAAACTATTCTCTCGGTA +
Preference number: 4 (lower is better)
Translates to: HCGERTLLHPSANRSQLMNTLSG*QTILSV
Trigger: TACCGAGAGAATAGTTTGTCATCCACTTAGTGTGTT...CATTAACTGGGATCTGTTAGCTGAGGGATGGAGTAGTGTCCGTTCACCACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCAGGCCCAAGCCTCTGTaGTATCTCATCTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLRPKPL*YLIWKS
Trigger: ACTCTTCCAGATGAGATATCACAGAGGCTTGGGCCT...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412139.6
CDS-3UTR TCA 90 bp TGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCAAGTCTCTTTTCTTCTTCCTTCTTCTTCCCATTTaGCTGGTTTGGAAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: WLSACQLMNHFCKSLFFFLLLPI*LVWKLW
Trigger: CCACAACTTCCAAACCAGTCAAATGGGAAGAAGAAG...GAAGAAGAAAAGAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTCGGGCAACTCTTATCTaGACATGCTGCACACAGGGA +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSRATLI*TCCTQG
Trigger: TCCCTGTGTGCAGCATGTTCAGATAAGAGTTGCCCG...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579850.5
CDS-3UTR GCA 90 bp TTAAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGACCCACAGAATCAAGTTaGCTTCCCTTAGCAACCAGC +
Preference number: 4 (lower is better)
Translates to: LKLPASTQLHTVIKLNLRPTESS*LPLATS
Trigger: GCTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGG...TCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTAATCCTCTTCCACTGTaGTCATACTCAAATCTAGAC +
Preference number: 4 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCNPLPL*SYSNLD
Trigger: GTCTAGATTTGAGTATGAGCACAGTGGAAGAGGATT...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTGCTACTTCTGTGGTTaGAGTCATGGTCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNCYFCG*SHGHFK
Trigger: TTTGAAGTGACCATGACTGCAACCACAGAAGTAGCA...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTTCTAGTTGCTCATTCTaGAAAATCTGTATCTGTGTC +
Preference number: 4 (lower is better)
Translates to: TASNGLTKCTTTRPPPRSSSCSF*KICICV
Trigger: GACACAGATACAGATTTTGCAGAATGAGCAACTAGA...AGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTTCTAGTTGCTCATTCTaGAAAATCTGTATCTGTGTC +
Preference number: 4 (lower is better)
Translates to: WSTIYFVAIVVNGHYSIPSSCSF*KICICV
Trigger: GACACAGATACAGATTTTGCAGAATGAGCAACTAGA...AGGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp AGACACACCCTGTGTGACTATGTCACCTGGCTCAGTGCTTGTCAACTCATGAACTCTAGTTGCTCATTCTaGAAAATCTGTATCTGTGTC +
Preference number: 4 (lower is better)
Translates to: RHTLCDYVTWLSACQLMNSSCSF*KICICV
Trigger: GACACAGATACAGATTTTGCAGAATGAGCAACTAGA...GTTCATGAGTTGACAAGCACTGAGCCAGGTGACATAGTCACACAGGGTGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGGACCACATCCCCTaGTTCCATTTATGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYLDHIP*FHLCPL
Trigger: TAAAGGACATAAATGGAAGCAGGGGATGTGGTCCAA...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GCACTGGCTAAATCAGAGGGTGATTCCTCTTGTTTAAGGTCGGTGTCAGAGATTTTGGACCACATCCCCTaGTTCCATTTATGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: ALAKSEGDSSCLRSVSEILDHIP*FHLCPL
Trigger: TAAAGGACATAAATGGAAGCAGGGGATGTGGTCCAA...AATCTCTGACACCGACCTTAAACAAGAGGAATCACCCTCTGATTTAGCCAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACTCCGGTTCAGACCCCATaGTATAGTCCTGTAGAAATC +
Preference number: 4 (lower is better)
Translates to: PCNTKQGFMLKTPSLHSTPVQTP*YSPVEI
Trigger: GATTTCTACAGGACTATAGCATGGGGTCTGAACCGG...AGTTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTCCGGTTCAGACCCCATaGTATAGTCCTGTAGAAATC +
Preference number: 4 (lower is better)
Translates to: LTKCTTTRPPPRSLYLYAPVQTP*YSPVEI
Trigger: GATTTCTACAGGACTATAGCATGGGGTCTGAACCGG...AGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCAATTCAGCCGGTTCAGACCCCATaGTATAGTCCTGTAGAAATC +
Preference number: 4 (lower is better)
Translates to: IDFIFLGPFSTPTLFPIQPVQTP*YSPVEI
Trigger: GATTTCTACAGGACTATAGCATGGGGTCTGAACCGG...CTGAATTGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGCCCAGTCATTGCCATaGTTTATCCGGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSAQSLP*FIRSSL
Trigger: CAAGGAGCTCCGGATAAAGCATGGCAATGACTGGGC...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000547146.6
ENST00000579850.5
CDS-3UTR GCA 90 bp CCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACTTTGTTGCCCAGTCATTaGCATGCTTTATCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PCNTKQGFMLKTPSLHSTLLPSH*HALSGA
Trigger: AGCTCCGGATAAAGCATGGCAATGACTGGGCAACAA...AGTTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000547146.6
ENST00000579850.5
CDS-3UTR GCA 90 bp ATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGATTTCATCCGCCGCCCCTATTGTTaGCCAGTCATTGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: IFISYIKFCYPEDEIDFIRRPYC*PVIAML
Trigger: AAGCATGGCAATGACTGGGCAACAATAGGGGCGGCG...GATGAAATCAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp TTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCTGAATGATCATTTAGAACGACATTaGTTTTCTGAGCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: FCLGYGRSDVLCGNSLNDHLERH*FSERVP
Trigger: CGGTACCCGCTCAGAAAAGCAATGTCGTTCTAAATG...ATCATTCAGACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCACTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAACATTTAGAACGACATTaGTTTTCTGAGCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: PLFSVIVSESTVAGESAEHLERH*FSERVP
Trigger: CGGTACCCGCTCAGAAAAGCAATGTCGTTCTAAATG...TTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
ENST00000584619.5
CDS-3UTR GCA 90 bp GACTCATCTGAACTACAACCAGGCTTGAGAGGAGACAGTGCCATGTCTGATCTTAGCTACATCAAGTTCTaGTATCCTGAGGATGAGATT +
Preference number: 4 (lower is better)
Translates to: DSSELQPGLRGDSAMSDLSYIKF*YPEDEI
Trigger: AATCTCATCCTCAGGATAGCAGAACTTGATGTAGCT...AAGATCAGACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTCAGATGAGTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp AGCCATTGTGGTGAACGGACACTACTCCATCCCTCAGCTAACAGATCCCAGTTATTATGGTTTGCAATTTaGCTTTTGATGGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: SHCGERTLLHPSANRSQLLWFAI*LLMVHH
Trigger: ATGGTGGACCATCAAAAGGCAAATTGCAAACCATAA...TAACTGGGATCTGTTAGCTGAGGGATGGAGTAGTGTCCGTTCACCACAATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTGACTGGAATCTGCAATaGTGCCATGGGGCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTDWNLQ*CHGARR
Trigger: TCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp AGTCTGAATGATGACTCTTGGTGTGTGACACTGCACTGTAACATTATCACTTGTATCTGGACTGGAATCTaGAATGCTGCCATGGGGCTA +
Preference number: 4 (lower is better)
Translates to: SLNDDSWCVTLHCNIITCIWTGI*NAAMGL
Trigger: TAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGAT...ACAAGTGATAATGTTACAGTGCAGTGTCACACACCAAGAGTCATCATTCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACATCGACTGTCAGTTCTaGTTGGGATATGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNIDCQF*LGYGRS
Trigger: ACTTCTTCCATATCCCAAGCAGAACTGACAGTCGAT...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CACCTGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCAAGTCTCTTTTCTTATCGACTGTCAGTTCTaGTTGGGATATGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: HLAQCLSTHEPLLQVSFLIDCQF*LGYGRS
Trigger: ACTTCTTCCATATCCCAAGCAGAACTGACAGTCGAT...AAGAAAAGAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR GCA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACAGTGTGCCTTCTTTaGTTGAACTGCCTATTTCTA +
Preference number: 4 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCTVCLL*LNCLFL
Trigger: TAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGT...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTACAGTGTGCCTTCTTTaGTTGAACTGCCTATTTCTA +
Preference number: 4 (lower is better)
Translates to: DCQFCLGYGRSDVLCGNSTVCLL*LNCLFL
Trigger: TAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGT...ACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: PLGGCSYFFEEVVINSVPKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...AGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp AGCCATTGTGGTGAACGGACACTACTCCATCCCTCAGCTAACAGATCCCAGTTAGTCTCTATACTTGTATaGTGGTCAAGTCTCAAACTT +
Preference number: 4 (lower is better)
Translates to: SHCGERTLLHPSANRSQLVSILV*WSSLKL
Trigger: AAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC...TAACTGGGATCTGTTAGCTGAGGGATGGAGTAGTGTCCGTTCACCACAATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR GCA 90 bp GAAGAAACATGGGTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGTCTCTATACTTGTATaGTGGTCAAGTCTCAAACTT +
Preference number: 4 (lower is better)
Translates to: EETWVIWTGICNAAMGLEVSILV*WSSLKL
Trigger: AAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC...TTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCACCCATGTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAATCCTCTTCCACTGTaGTCATACTCAAATCTGCTA +
Preference number: 4 (lower is better)
Translates to: PNVPPQDHLLGLYTCMLVNPLPL*SYSNLL
Trigger: TAGCAGATTTGAGTATGAGCACAGTGGAAGAGGATT...GACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412139.6
CDS-3UTR CCA 90 bp TTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTTGGGTCCGGGCACTTTaGAAGAACCAGGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: FEEVVINSVPSLLELPISWVRAL*KNQDGS
Trigger: GCTTCCATCCTGGTTCTTCCAAAGTGCCCGGACCCA...AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCAAGTCTCTTTTCTTCTTCCTGTGGTTGCAGTCATaGTCACTTCAAAGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: WLSACQLMNHFCKSLFFFLWLQS*SLQSSD
Trigger: ATCAGAGCTTTGAAGTGACCATGACTGCAACCACAG...GAAGAAGAAAAGAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACGTTGTAAACCATGCTTaGCTAACTGCTGAAACTTCC +
Preference number: 4 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYVVNHA*LTAETS
Trigger: GGAAGTTTCAGCAGTTAGCCAAGCATGGTTTACAAC...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACGCTGCACACTGGAATTaGTATTACTGTTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYAAHWN*YYCLEL
Trigger: GAGTTCCAAACAGTAATACCAATTCCAGTGTGCAGC...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp GATGGCTGTATTATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTGCTGCACACTGGAATTaGTATTACTGTTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: DGCIIFQAGNSYLNMLHTAAHWN*YYCLEL
Trigger: GAGTTCCAAACAGTAATACCAATTCCAGTGTGCAGC...AGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGATAATACAGCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp CCACTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAGAAACATGGGTGATCTaGACTGGAATCTGCAATGCT +
Preference number: 4 (lower is better)
Translates to: PLFSVIVSESTVAGESAEETWVI*TGICNA
Trigger: AGCATTGCAGATTCCAGTCCAGATCACCCATGTTTC...TTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ATTATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTGGAATTGGTTCTGCTGAAGAAACATaGGTGATCTGGACTGGAATC +
Preference number: 4 (lower is better)
Translates to: IIFQAGNSYLNMLHTGIGSAEET*VIWTGI
Trigger: GATTCCAGTCCAGATCACCCATGTTTCTTCAGCAGA...ACCAATTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp TTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCTGAATGATCTGAATGATGACTCTTaGTGTGTGACACTGCACTGT +
Preference number: 4 (lower is better)
Translates to: FCLGYGRSDVLCGNSLNDLNDDS*CVTLHC
Trigger: ACAGTGCAGTGTCACACACCAAGAGTCATCATTCAG...ATCATTCAGACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTGGAATTGGTATTCTGAATGATGACTCTTaGTGTGTGACACTGCACTGT +
Preference number: 4 (lower is better)
Translates to: IFQAGNSYLNMLHTGIGILNDDS*CVTLHC
Trigger: ACAGTGCAGTGTCACACACCAAGAGTCATCATTCAG...AATACCAATTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTGATGATGTTGGAGTATaGGATCTGTTAGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCDDVGV*DLLVLS
Trigger: TGACAACACTAACAGATCCCATACTCCAACATCATC...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGTCCCACTGCCAGCAATaGGTTAACCAAATGTACCAC +
Preference number: 4 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMSHCQQ*VNQMYH
Trigger: GTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGA...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR CAA 72 bp TGTACCACCACAAGACCACCTCCTAGGTCTCTATACTaGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: CTTTRPPPRSLY*YAGQVSNLVFL
Trigger: CAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
3UTR CAA 72 bp TCTGCTATCCTGAGGATGAGATTGATTTCATCTTCCTaGGTCCATTCAGTACCCCCACTCTGTTTCCAATTC +
Preference number: 4 (lower is better)
Translates to: SAILRMRLISSS*VHSVPPLCFQF
Trigger: GAATTGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCTCATCCTCAGGATAGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp TGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTTCCCTTCTGTGTCCTaGGTCAAAGTCACAGAGTTC +
Preference number: 4 (lower is better)
Translates to: WSSLKLSLLEDQKITGKLFPSVS*VKVTEF
Trigger: GAACTCTGTGACTTTGACTCAGGACACAGAAGGGAA...GAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTAGACCATTCCCTTCTGTGTCCTaGGTCAAAGTCACAGAGTTC +
Preference number: 4 (lower is better)
Translates to: VSNLVFLKIRRSLVSSRPFPSVS*VKVTEF
Trigger: GAACTCTGTGACTTTGACTCAGGACACAGAAGGGAA...TGGTCTAGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCATTCAATACTATCTTCTaGGTCTATTTCATCCGCTTC +
Preference number: 4 (lower is better)
Translates to: TTTRPPPRSLYLYAGQVSFNTIF*VYFIRF
Trigger: GAAGCGGATGAAATAGACTCAGAAGATAGTATTGAA...TGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp ATTTCATCTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCATTCAATACTATCTTCTaGGTCTATTTCATCCGCTTC +
Preference number: 4 (lower is better)
Translates to: ISSGKVSASRASGGSGKSFNTIF*VYFIRF
Trigger: GAAGCGGATGAAATAGACTCAGAAGATAGTATTGAA...TGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp TGCCCAGTCATTGCCATGCTTTATCCGGAGCCTAAAACAAGAGTCTGCCAATCATTCAATACTATCTTCTaGGTCTATTTCATCCGCTTC +
Preference number: 4 (lower is better)
Translates to: CPVIAMLYPEPKTRVCQSFNTIF*VYFIRF
Trigger: GAAGCGGATGAAATAGACTCAGAAGATAGTATTGAA...TGATTGGCAGACTCTTGTTTTAGGCTCCGGATAAAGCATGGCAATGACTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTCTGATCATTTTCTaGAAGTGGAAGTGCAACAAC +
Preference number: 4 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYALIIF*KWKCNN
Trigger: GTTGTTGCACTTCCACTTTCAGAAAATGATCAGAGC...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp GTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTAGACCATGCTTGGCTAACTGCTaGAACTTCCTCGTTACCCAA +
Preference number: 4 (lower is better)
Translates to: VSNLVFLKIRRSLVSSRPCLANC*NFLVTQ
Trigger: TTGGGTAACGAGGAAGTTTCAGCAGTTAGCCAAGCA...TGGTCTAGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGACGACATTGCTTTTCTaGGCGGGTACCGACTCGTTC +
Preference number: 4 (lower is better)
Translates to: SYFFEEVVINSVPSLLELTTLLF*AGTDSF
Trigger: GAACGAGTCGGTACCCGCTCAGAAAAGCAATGTCGT...CAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGCTGAAGAAACATGGGTaGTCTGGACTGGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKLKKHG*SGLESA
Trigger: TGCAGATTCCAGTCCAGATCACCCATGTTTCTTCAG...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTCTGGGGATAAAGCATaGACAATAATCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYSGDKA*TIICSG
Trigger: TCCTGAACAGATTATTGTTCATGCTTTATCCCCAGA...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATATGACTCTTGGTGTGTaGCACTGCACTGTAACATTA +
Preference number: 4 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYMTLGV*HCTVTL
Trigger: TAATGTTACAGTGCAGTGTCACACACCAAGAGTCAT...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGGGATATGGAAGAAGTaGTGTCCTCTGTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSGIWKK*CPLWQQ
Trigger: CTGTTGCCACAGAGGACATCACTTCTTCCATATCCC...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGGGATATGGAAGAAGTaGTGTCCTCTGTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: PQQLSFRDSKLFLVAEVNGIWKK*CPLWQQ
Trigger: CTGTTGCCACAGAGGACATCACTTCTTCCATATCCC...ATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCCCAAGGATGATCCAATaGTATTTGATTCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: PNVPPQDHLLGLYTCMLVPRMIQ*YLILPD
Trigger: ATCAGGAAGAATCAAATATCATTGGATCATCCTTGG...GACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCAAGGATGATCCAATaGTATTTGATTCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: PKSAPTASNGLTKCTTTRPRMIQ*YLILPD
Trigger: ATCAGGAAGAATCAAATATCATTGGATCATCCTTGG...TCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTAGACCATGGTTTCTGAGGGGGTaGAAACTGCTTAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: VSNLVFLKIRRSLVSSRPWFLRG*KLLRFW
Trigger: CCAGAATCTAAGCAGTTTTCACCCCCTCAGAAACCA...TGGTCTAGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTTGGTTTCTGAGGGGGTaGAAACTGCTTAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTWFLRG*KLLRFW
Trigger: CCAGAATCTAAGCAGTTTTCACCCCCTCAGAAACCA...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GACTCATCTGAACTACAACCAGGCTTGAGAGGAGACAGTGCCATGTCTGATCTTAAAACCCTTTTAAGATaGCAGATGAACAACCCTATC +
Preference number: 4 (lower is better)
Translates to: DSSELQPGLRGDSAMSDLKTLLR*QMNNPI
Trigger: GATAGGGTTGTTCATCTGTCATCTTAAAAGGGTTTT...AAGATCAGACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTCAGATGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412139.6
CDS-3UTR TCA 90 bp ATTTGCCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACATCCACAGTTGTTCCTTaGGCTTCTCAATTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ICLLMVHHLLRSHCGERTSTVVP*ASQFLQ
Trigger: CTGAAGAAATTGAGAAGCTCAAGGAACAACTGTGGA...TGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412139.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp CCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTGGGCAGCAATACTTTaGGAGCCAAAGTTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: PLGGCSYFFEEVVINSVPWAAIL*EPKFES
Trigger: ACTTTCAAACTTTGGCTCTCAAAGTATTGCTGCCCA...AGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR TCA 90 bp CTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAGAACTTCTTCTTCCCATTTaGCTGGTTTGGAAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LFSVIVSESTVAGESAEELLLPI*LVWKLW
Trigger: CCACAACTTCCAAACCAGTCAAATGGGAAGAAGAAG...TTCTTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR GCA 90 bp CCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATCCCACAGAATCAAGTTaGCTTCCCTTAGCAACCAGC +
Preference number: 4 (lower is better)
Translates to: PQQLSFRDSKLFLVAEVNPTESS*LPLATS
Trigger: GCTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGG...ATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GATGGCTGTATTATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTAATCCTCTTCCACTGTaGTCATACTCAAATCTAGAC +
Preference number: 4 (lower is better)
Translates to: DGCIIFQAGNSYLNMLHTNPLPL*SYSNLD
Trigger: GTCTAGATTTGAGTATGAGCACAGTGGAAGAGGATT...AGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGATAATACAGCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR GCA 90 bp CCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAATCTAGTTGCTCATTCTaGAAAATCTGTATCTGTGTC +
Preference number: 4 (lower is better)
Translates to: PPQDHLLGLYTCMLVKSQSSCSF*KICICV
Trigger: GACACAGATACAGATTTTGCAGAATGAGCAACTAGA...TTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCACTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAACACTCTTCTATAAACTaGAAACAAAGGCCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: PLFSVIVSESTVAGESAEHSSIN*KQRPVQ
Trigger: CTGAACCGGCCTTTGTTTGCAGTTTATAGAAGAGTG...TTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
ENST00000584619.5
CDS-3UTR GCA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGTTGTTGCCCAGTCATTaGCATGCTTTATCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKLLPSH*HALSGA
Trigger: AGCTCCGGATAAAGCATGGCAATGACTGGGCAACAA...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000547146.6
ENST00000579850.5
CDS-3UTR GCA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGCGCCGCCCCTATTGTTaGCCAGTCATTGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVRRPYC*PVIAML
Trigger: AAGCATGGCAATGACTGGGCAACAATAGGGGCGGCG...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGTCGTTCAGCCACAGCTaGCCAAGACACACCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVSFSHS*PRHTLC
Trigger: ACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGA...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCTTATGGTTTGCAATTTaGCTTTTGATGGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: PNVPPQDHLLGLYTCMLVLWFAI*LLMVHH
Trigger: ATGGTGGACCATCAAAAGGCAAATTGCAAACCATAA...GACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CATTGTGGTGAACGGACACTACTCCATCCCTCAGCTAACAGATCCCAGTTAATGTTATGGTTTGCAATTTaGCTTTTGATGGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: HCGERTLLHPSANRSQLMLWFAI*LLMVHH
Trigger: ATGGTGGACCATCAAAAGGCAAATTGCAAACCATAA...CATTAACTGGGATCTGTTAGCTGAGGGATGGAGTAGTGTCCGTTCACCACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp CTGGAATTGGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCTCCAAAAGCGACTGGAATCTGCAATaGTGCCATGGGGCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: LELVLLFGTPDPDLFSKSDWNLQ*CHGARR
Trigger: TCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC...GCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAATTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR GCA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACACAGTGTGCCTTCTTTaGTTGAACTGCCTATTTCTA +
Preference number: 4 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYTVCLL*LNCLFL
Trigger: TAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGT...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ACCAAATCTTCGACATCCTTTGAATCTTCTGAAACAGGACTGCCCAAGGATGATAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: TKSSTSFESSETGLPKDDKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...ATCATCCTTGGGCAGTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GACTCATCTGAACTACAACCAGGCTTGAGAGGAGACAGTGCCATGTCTGATCTTGTCTCTATACTTGTATaGTGGTCAAGTCTCAAACTT +
Preference number: 4 (lower is better)
Translates to: DSSELQPGLRGDSAMSDLVSILV*WSSLKL
Trigger: AAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC...AAGATCAGACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTCAGATGAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCGTCTCTATACTTGTATaGTGGTCAAGTCTCAAACTT +
Preference number: 4 (lower is better)
Translates to: TVSSAWDMEEVMSSVATVVSILV*WSSLKL
Trigger: AAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC...GACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTAACACTTTCCTGTTTTaGGTCCGGGCACTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTNTFLF*VRALWK
Trigger: CTTCCAAAGTGCCCGGACCCAAAACAGGAAAGTGTT...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331242.12
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCAACACTTTCCTGTTTTaGGTCCGGGCACTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLNTFLF*VRALWK
Trigger: CTTCCAAAGTGCCCGGACCCAAAACAGGAAAGTGTT...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331242.12
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTAATCTAGACAACGGATaGATCAGCTACAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTNLDNG*ISYSPS
Trigger: GGAAGGGCTGTAGCTGATCCATCCGTTGTCTAGATT...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TTAAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGAAATCTAGACAACGGATaGATCAGCTACAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: LKLPASTQLHTVIKLNLRNLDNG*ISYSPS
Trigger: GGAAGGGCTGTAGCTGATCCATCCGTTGTCTAGATT...TCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTACTGTGGTTGCAGTCATaGTCACTTCAAAGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLLWLQS*SLQSSD
Trigger: ATCAGAGCTTTGAAGTGACCATGACTGCAACCACAG...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp AGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCAATTCCATCTGCTACTTCTGTaGTTGCAGTCATGGTCACTT +
Preference number: 4 (lower is better)
Translates to: RLISSSLVHSVPPLCFQFHLLLL*LQSWSL
Trigger: AAGTGACCATGACTGCAACCACAGAAGTAGCAGATG...GAATTGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp CCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTGTTGTAAACCATGCTTaGCTAACTGCTGAAACTTCC +
Preference number: 4 (lower is better)
Translates to: PLGGCSYFFEEVVINSVPVVNHA*LTAETS
Trigger: GGAAGTTTCAGCAGTTAGCCAAGCATGGTTTACAAC...AGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TTCAGTACCCCCACTCTGTTTCCAATTCAGGTAGTTGAGCCATTTAGAACGACAGTTGTAAACCATGCTTaGCTAACTGCTGAAACTTCC +
Preference number: 4 (lower is better)
Translates to: FSTPTLFPIQVVEPFRTTVVNHA*LTAETS
Trigger: GGAAGTTTCAGCAGTTAGCCAAGCATGGTTTACAAC...TGTCGTTCTAAATGGCTCAACTACCTGAATTGGAAACAGAGTGGGGGTACTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp TCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAATATCAATTTCTTCCTTaGACCACATCCCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SHVTLNRDLCLKLPASTQYQFLP*TTSPAS
Trigger: GGAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATA...TTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ACCAAATCTTCGACATCCTTTGAATCTTCTGAAACAGGACTGCCCAAGGATGATTATCAATTTCTTCCTTaGACCACATCCCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TKSSTSFESSETGLPKDDYQFLP*TTSPAS
Trigger: GGAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATA...ATCATCCTTGGGCAGTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTATATCAATTTCTTCCTTaGACCACATCCCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLYQFLP*TTSPAS
Trigger: GGAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATA...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTGTGACTATGTCACCTaGCTCAGTGCTTGTCAACTC +
Preference number: 4 (lower is better)
Translates to: WSSLKLSLLEDQKITGKLCDYVT*LSACQL
Trigger: GAGTTGACAAGCACTGAGCCAGGTGACATAGTCACA...GAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTAGACCATGTGACTATGTCACCTaGCTCAGTGCTTGTCAACTC +
Preference number: 4 (lower is better)
Translates to: VSNLVFLKIRRSLVSSRPCDYVT*LSACQL
Trigger: GAGTTGACAAGCACTGAGCCAGGTGACATAGTCACA...TGGTCTAGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TTAAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGTGACTATGTCACCTaGCTCAGTGCTTGTCAACTC +
Preference number: 4 (lower is better)
Translates to: LKLPASTQLHTVIKLNLRCDYVT*LSACQL
Trigger: GAGTTGACAAGCACTGAGCCAGGTGACATAGTCACA...TCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ATTTGCCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACAGCTGCACACTGGAATTaGTATTACTGTTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: ICLLMVHHLLRSHCGERTAAHWN*YYCLEL
Trigger: GAGTTCCAAACAGTAATACCAATTCCAGTGTGCAGC...TGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACGAACATGCTGCACACTaGAATTGGTATTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNEHAAH*NWYYCL
Trigger: CAAACAGTAATACCAATTCCAGTGTGCAGCATGTTC...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp GATGGCTGTATTATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTGAACATGCTGCACACTaGAATTGGTATTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: DGCIIFQAGNSYLNMLHTEHAAH*NWYYCL
Trigger: CAAACAGTAATACCAATTCCAGTGTGCAGCATGTTC...AGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGATAATACAGCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp GGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTATGGGTGATCTGGACTaGAATCTGCAATGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GQVSNLVFLKIRRSLVSSMGDLD*NLQCCH
Trigger: ATGGCAGCATTGCAGATTCCAGTCCAGATCACCCAT...AGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAAGAAACATGGGTGATCTaGACTGGAATCTGCAATGCT +
Preference number: 4 (lower is better)
Translates to: SHVTLNRDLCLKLPASTQETWVI*TGICNA
Trigger: AGCATTGCAGATTCCAGTCCAGATCACCCATGTTTC...TTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGCCAGTGGGCTGTAGATaGAAAGAGGGAAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKPVGCR*KEGRIS
Trigger: TGAGATTCTTCCCTCTTTCCATCTACAGCCCACTGG...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACTCTGAATGATGACTCTTaGTGTGTGACACTGCACTGT +
Preference number: 4 (lower is better)
Translates to: PCNTKQGFMLKTPSLHSTLNDDS*CVTLHC
Trigger: ACAGTGCAGTGTCACACACCAAGAGTCATCATTCAG...AGTTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACGATGATGTTGGAGTATaGGATCTGTTAGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNDDVGV*DLLVLS
Trigger: TGACAACACTAACAGATCCCATACTCCAACATCATC...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTCAGCAACAATGTGTGTaGCTTAAGGACTGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: LTKCTTTRPPPRSLYLYAQQQCV*LKDCGY
Trigger: ATAGCCACAGTCCTTAAGCCACACACATTGTTGCTG...AGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACAGCAACAATGTGTGTaGCTTAAGGACTGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: SHVTLNRDLCLKLPASTQQQQCV*LKDCGY
Trigger: ATAGCCACAGTCCTTAAGCCACACACATTGTTGCTG...TTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAACTGCTTAGATTCTGGTaGGTTTTGTTACTATGCTTA +
Preference number: 4 (lower is better)
Translates to: PPQDHLLGLYTCMLVKSQLLRFW*VLLLCL
Trigger: TAAGCATAGTAACAAAACCCACCAGAATCTAAGCAG...TTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACTGCTTAGATTCTGGTaGGTTTTGTTACTATGCTTA +
Preference number: 4 (lower is better)
Translates to: PKSAPTASNGLTKCTTTRLLRFW*VLLLCL
Trigger: TAAGCATAGTAACAAAACCCACCAGAATCTAAGCAG...TCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTATTATCTTCAGAATTTTTGGAAACTaGCCTCTAAAAGTATTCCCC +
Preference number: 4 (lower is better)
Translates to: DWNLQCCHGARRDGCIIFRIFGN*PLKVFP
Trigger: GGGGAATACTTTTAGAGGCCAGTTTCCAAAAATTCT...GAAGATAATACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412139.6
3UTR CAA 72 bp GGGAACGAAACATCCTTATGGTTTGCAATTTGCCTTTaGATGGTCCACCATTTACTTCGTAGCCATTGTGGT +
Preference number: 4 (lower is better)
Translates to: GNETSLWFAICL*MVHHLLRSHCG
Trigger: ACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTTTCCCTTCTGTGTCCTaGGTCAAAGTCACAGAGTTC +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSFPSVS*VKVTEF
Trigger: GAACTCTGTGACTTTGACTCAGGACACAGAAGGGAA...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GCACTGGCTAAATCAGAGGGTGATTCCTCTTGTTTAAGGTCGGTGTCAGAGATTTTCAATACTATCTTCTaGGTCTATTTCATCCGCTTC +
Preference number: 4 (lower is better)
Translates to: ALAKSEGDSSCLRSVSEIFNTIF*VYFIRF
Trigger: GAAGCGGATGAAATAGACTCAGAAGATAGTATTGAA...AATCTCTGACACCGACCTTAAACAAGAGGAATCACCCTCTGATTTAGCCAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGAATCATCAATACTCTaGTCATCCTCAGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYESSIL*SSSEDK
Trigger: TTTGTCCTCTGAGGATGATCAGAGTATTGATGATTC...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTATGGAAGTGCAACAACTaGTATGCAAGGAGTAGAATC +
Preference number: 4 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLWKCNN*YARSRI
Trigger: GATTCTACTCCTTGCATATCAGTTGTTGCACTTCCA...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp CCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACTTGGAAGTGCAACAACTaGTATGCAAGGAGTAGAATC +
Preference number: 4 (lower is better)
Translates to: PCNTKQGFMLKTPSLHSTWKCNN*YARSRI
Trigger: GATTCTACTCCTTGCATATCAGTTGTTGCACTTCCA...AGTTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp CCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACTGCTCTGATCATTTTCTaGAAGTGGAAGTGCAACAAC +
Preference number: 4 (lower is better)
Translates to: PCNTKQGFMLKTPSLHSTALIIF*KWKCNN
Trigger: GTTGTTGCACTTCCACTTTCAGAAAATGATCAGAGC...AGTTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTTTATCCGGAGCTCCTTaGGCTTCTCAATTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTLSGAP*ASQFLQ
Trigger: CTGAAGAAATTGAGAAGCTCAAGGAGCTCCGGATAA...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000547146.6
ENST00000579850.5
CDS-3UTR TCA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGTTATCCGGAGCTCCTTaGGCTTCTCAATTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKLSGAP*ASQFLQ
Trigger: CTGAAGAAATTGAGAAGCTCAAGGAGCTCCGGATAA...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000547146.6
ENST00000579850.5
CDS-3UTR TCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCTTGTCAACTCATaGACCACTTCTGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSVLVNS*TTSASL
Trigger: GAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCAC...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATCGGGCAACTCTTATCTaGACATGCTGCACACTGGAA +
Preference number: 4 (lower is better)
Translates to: EVVINSVPSLLELPISKNRATLI*TCCTLE
Trigger: TTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCG...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp GTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGCTGAAGAAACATGGGTaGTCTGGACTGGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: VSILVCWSSLKLSLLEDQLKKHG*SGLESA
Trigger: TGCAGATTCCAGTCCAGATCACCCATGTTTCTTCAG...CTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CTGGAATTGGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCTCCAAAAGCCTGAAGAAACATGGGTaGTCTGGACTGGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: LELVLLFGTPDPDLFSKSLKKHG*SGLESA
Trigger: TGCAGATTCCAGTCCAGATCACCCATGTTTCTTCAG...GCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAATTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp ATTATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTGGAATTGGTTCTGGGGATAAAGCATaGACAATAATCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: IIFQAGNSYLNMLHTGIGSGDKA*TIICSG
Trigger: TCCTGAACAGATTATTGTTCATGCTTTATCCCCAGA...ACCAATTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp CCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACTATGACTCTTGGTGTGTaGCACTGCACTGTAACATTA +
Preference number: 4 (lower is better)
Translates to: PCNTKQGFMLKTPSLHSTMTLGV*HCTVTL
Trigger: TAATGTTACAGTGCAGTGTCACACACCAAGAGTCAT...AGTTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGGAAAATCAGATGACTaGATATCACTATCGACTGTC +
Preference number: 4 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYGKSDD*ISLSTV
Trigger: GACAGTCGATAGTGATATTCAGTCATCTGATTTTCC...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACCTGAATTTGGATACATaGGCATCATTAAATGATGGC +
Preference number: 4 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYLNLDT*ASLNDG
Trigger: GCCATCATTTAATGATGCTCATGTATCCAAATTCAG...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAAGACAGTGCCATGTCTaGTCTTTAGAGAAACTGTAC +
Preference number: 4 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLRQCHV*SLEKLY
Trigger: GTACAGTTTCTCTAAAGATCAGACATGGCACTGTCT...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp AATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGATAACTACAACCAGGCTTaGGAGGAGACAGTGCCATGT +
Preference number: 4 (lower is better)
Translates to: NVIFISYIKFCYPEDEIDNYNQA*EETVPC
Trigger: ACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTT...ATCAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR TCA 90 bp TCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGAACTACAACCAGGCTTaGGAGGAGACAGTGCCATGT +
Preference number: 4 (lower is better)
Translates to: SYFFEEVVINSVPSLLELNYNQA*EETVPC
Trigger: ACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTT...CAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAGAATTGAAAAGACTCATCTaGACTACAACCAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: LFSVIVSESTVAGESAEELKRLI*TTTRLE
Trigger: CTCAAGCCTGGTTGTAGTTCAGATGAGTCTTTTCAA...TTCTTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTTGGTTTCTGAGGGGGTaGAAACTGCTTAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSWFLRG*KLLRFW
Trigger: CCAGAATCTAAGCAGTTTTCACCCCCTCAGAAACCA...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp AGTCTGAATGATGACTCTTGGTGTGTGACACTGCACTGTAACATTATCACTTGTGCTCTGATCATTTTCTaGAACATTCTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SLNDDSWCVTLHCNIITCALIIF*NILRAV
Trigger: CACTGCCCTCAGAATGTTTCAGAAAATGATCAGAGC...ACAAGTGATAATGTTACAGTGCAGTGTCACACACCAAGAGTCATCATTCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425406.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCACTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAAATCCTCTTCCACTGTaGTCATACTCAAATCTAGAC +
Preference number: 4 (lower is better)
Translates to: PLFSVIVSESTVAGESAENPLPL*SYSNLD
Trigger: GTCTAGATTTGAGTATGAGCACAGTGGAAGAGGATT...TTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
ENST00000584619.5
CDS-3UTR GCA 90 bp ACCAAATCTTCGACATCCTTTGAATCTTCTGAAACAGGACTGCCCAAGGATGATTGCTACTTCTGTGGTTaGAGTCATGGTCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: TKSSTSFESSETGLPKDDCYFCG*SHGHFK
Trigger: TTTGAAGTGACCATGACTGCAACCACAGAAGTAGCA...ATCATCCTTGGGCAGTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGAGTAACCTCATCATCTaGTACTTCTGTGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMSNLII*YFCGCS
Trigger: ACTGCAACCACAGAAGTAGCAGATGATGAGGTTACT...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAATTGGACCACATCCCCTaGTTCCATTTATGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: SHVTLNRDLCLKLPASTQLDHIP*FHLCPL
Trigger: TAAAGGACATAAATGGAAGCAGGGGATGTGGTCCAA...TTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATCCGGTTCAGACCCCATaGTATAGTCCTGTAGAAATC +
Preference number: 4 (lower is better)
Translates to: PQQLSFRDSKLFLVAEVNPVQTP*YSPVEI
Trigger: GATTTCTACAGGACTATAGCATGGGGTCTGAACCGG...ATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGCACTCTTCTATAAACTaGAAACAAAGGCCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMHSSIN*KQRPVQ
Trigger: CTGAACCGGCCTTTGTTTGCAGTTTATAGAAGAGTG...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp AGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCAATTCCACTCTTCTATAAACTaGAAACAAAGGCCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: RLISSSLVHSVPPLCFQFHSSIN*KQRPVQ
Trigger: CTGAACCGGCCTTTGTTTGCAGTTTATAGAAGAGTG...GAATTGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp GTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGTTGTTGCCCAGTCATTaGCATGCTTTATCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: VSILVCWSSLKLSLLEDQLLPSH*HALSGA
Trigger: AGCTCCGGATAAAGCATGGCAATGACTGGGCAACAA...CTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000547146.6
ENST00000579850.5
CDS-3UTR GCA 90 bp CCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATTGTCACCTGGCTCAGTaGTTGTCAACTCATGAACCA +
Preference number: 4 (lower is better)
Translates to: PQQLSFRDSKLFLVAEVNCHLAQ*LSTHEP
Trigger: TGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACA...ATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGCATTTAGAACGACATTaGTTTTCTGAGCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKHLERH*FSERVP
Trigger: CGGTACCCGCTCAGAAAAGCAATGTCGTTCTAAATG...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTTGGAATCTGCAATGCTaGCATGGGGCTAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSWNLQC*HGARRD
Trigger: ATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCA...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTATCGACTGTCAGTTCTaGTTGGGATATGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: LTKCTTTRPPPRSLYLYAIDCQF*LGYGRS
Trigger: ACTTCTTCCATATCCCAAGCAGAACTGACAGTCGAT...AGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAAATCGACTGTCAGTTCTaGTTGGGATATGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: SHVTLNRDLCLKLPASTQIDCQF*LGYGRS
Trigger: ACTTCTTCCATATCCCAAGCAGAACTGACAGTCGAT...TTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCACTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAACAGTGTGCCTTCTTTaGTTGAACTGCCTATTTCTA +
Preference number: 4 (lower is better)
Translates to: PLFSVIVSESTVAGESAETVCLL*LNCLFL
Trigger: TAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGT...TTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAATCTAGACAACGGATaGATCAGCTACAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VSILVCWSSLKLSLLEDQNLDNG*ISYSPS
Trigger: GGAAGGGCTGTAGCTGATCCATCCGTTGTCTAGATT...CTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TTGGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCTCCAAAAGCGTTGGGCATCTGCTACTTCTGTaGTTGCAGTCATGGTCACTT +
Preference number: 4 (lower is better)
Translates to: LVLLFGTPDPDLFSKSVGHLLLL*LQSWSL
Trigger: AAGTGACCATGACTGCAACCACAGAAGTAGCAGATG...CCCAACGCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp GGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTCATCTGCTACTTCTGTaGTTGCAGTCATGGTCACTT +
Preference number: 4 (lower is better)
Translates to: GQVSNLVFLKIRRSLVSSHLLLL*LQSWSL
Trigger: AAGTGACCATGACTGCAACCACAGAAGTAGCAGATG...AGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp AGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCAATTCGTTGTAAACCATGCTTaGCTAACTGCTGAAACTTCC +
Preference number: 4 (lower is better)
Translates to: RLISSSLVHSVPPLCFQFVVNHA*LTAETS
Trigger: GGAAGTTTCAGCAGTTAGCCAAGCATGGTTTACAAC...GAATTGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp CTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTATGGGTGATCTGGACTaGAATCTGCAATGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LVCWSSLKLSLLEDQKITMGDLD*NLQCCH
Trigger: ATGGCAGCATTGCAGATTCCAGTCCAGATCACCCAT...AGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGGAAACATGGGTGATCTaGACTGGAATCTGCAATGCT +
Preference number: 4 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKETWVI*TGICNA
Trigger: AGCATTGCAGATTCCAGTCCAGATCACCCATGTTTC...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TTGGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCTCCAAAAGCGTTGGGTCTGCTGAAGAAACATaGGTGATCTGGACTGGAATC +
Preference number: 4 (lower is better)
Translates to: LVLLFGTPDPDLFSKSVGSAEET*VIWTGI
Trigger: GATTCCAGTCCAGATCACCCATGTTTCTTCAGCAGA...CCCAACGCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp TGTCAAAGGCAAGACAGATTCAGTATCTATAACATCAGATGCCTGGATAAAGCCCTGAATGATGACTCTTaGTGTGTGACACTGCACTGT +
Preference number: 4 (lower is better)
Translates to: CQRQDRFSIYNIRCLDKALNDDS*CVTLHC
Trigger: ACAGTGCAGTGTCACACACCAAGAGTCATCATTCAG...GGCTTTATCCAGGCATCTGATGTTATAGATACTGAATCTGTCTTGCCTTTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTAGTTCTGTGCTATTTTaGTCACTGAATTTGGATACA +
Preference number: 4 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCSSVLF*SLNLDT
Trigger: TGTATCCAAATTCAGTGACCAAAATAGCACAGAACT...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAAGTTCTGTGCTATTTTaGTCACTGAATTTGGATACA +
Preference number: 4 (lower is better)
Translates to: PPQDHLLGLYTCMLVKSQSSVLF*SLNLDT
Trigger: TGTATCCAAATTCAGTGACCAAAATAGCACAGAACT...TTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ATTATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTGGAATTGGTGATGATGTTGGAGTATaGGATCTGTTAGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: IIFQAGNSYLNMLHTGIGDDVGV*DLLVLS
Trigger: TGACAACACTAACAGATCCCATACTCCAACATCATC...ACCAATTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp ACATCAAGTTCTGCTATCCTGAGGATGAGATTGATTTCATCTTCCTTGGTCCATCAGCAACAATGTGTGTaGCTTAAGGACTGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: TSSSAILRMRLISSSLVHQQQCV*LKDCGY
Trigger: ATAGCCACAGTCCTTAAGCCACACACATTGTTGCTG...ATGGACCAAGGAAGATGAAATCAATCTCATCCTCAGGATAGCAGAACTTGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp GTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGTCCCACTGCCAGCAATaGGTTAACCAAATGTACCAC +
Preference number: 4 (lower is better)
Translates to: VSILVCWSSLKLSLLEDQSHCQQ*VNQMYH
Trigger: GTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGA...CTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATTCCCACTGCCAGCAATaGGTTAACCAAATGTACCAC +
Preference number: 4 (lower is better)
Translates to: PQQLSFRDSKLFLVAEVNSHCQQ*VNQMYH
Trigger: GTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGA...ATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTTCCCACTGCCAGCAATaGGTTAACCAAATGTACCAC +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSSHCQQ*VNQMYH
Trigger: GTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGA...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTTTCTTCCCATTTGACTaGTTTGGAAGTTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTFFPFD*FGSCGQ
Trigger: CTGCCCACAACTTCCAAACCAGTCAAATGGGAAGAA...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
3UTR CAA 72 bp TCTGAACATGCTGCACACTGGAATTGGTATTACTGTTaGGAACTCCAGATCCTGATTTATTCTCCAAAAGCG +
Preference number: 4 (lower is better)
Translates to: SEHAAHWNWYYC*ELQILIYSPKA
Trigger: CGCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAATTCCAGTGTGCAGCATGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp TTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGAATCATCAATACTCTaGTCATCCTCAGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: LTKCTTTRPPPRSLYLYAESSIL*SSSEDK
Trigger: TTTGTCCTCTGAGGATGATCAGAGTATTGATGATTC...AGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp TTAAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGAGCTCTGATCATTTTCTaGAAGTGGAAGTGCAACAAC +
Preference number: 4 (lower is better)
Translates to: LKLPASTQLHTVIKLNLRALIIF*KWKCNN
Trigger: GTTGTTGCACTTCCACTTTCAGAAAATGATCAGAGC...TCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGGCTCTGATCATTTTCTaGAAGTGGAAGTGCAACAAC +
Preference number: 4 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKALIIF*KWKCNN
Trigger: GTTGTTGCACTTCCACTTTCAGAAAATGATCAGAGC...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATTGCTTGGCTAACTGCTaGAACTTCCTCGTTACCCAA +
Preference number: 4 (lower is better)
Translates to: EVVINSVPSLLELPISKNCLANC*NFLVTQ
Trigger: TTGGGTAACGAGGAAGTTTCAGCAGTTAGCCAAGCA...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGTCGGCACCGATCTTTaGCAGAAGATGCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVVGTDL*QKMHFF
Trigger: GAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGAC...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATGTGCTTGTCAACTCATaGACCACTTCTGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: EVVINSVPSLLELPISKNVLVNS*TTSASL
Trigger: GAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCAC...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTCTGAAGAAACATGGGTaGTCTGGACTGGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: FEEVVINSVPSLLELPISLKKHG*SGLESA
Trigger: TGCAGATTCCAGTCCAGATCACCCATGTTTCTTCAG...AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTTCTGTGGCAACAGTCTaGATGATGACTCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: FEEVVINSVPSLLELPISSVATV*MMTLGV
Trigger: CACACCAAGAGTCATCATTCAGACTGTTGCCACAGA...AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAAGGAAAATCAGATGACTaGATATCACTATCGACTGTC +
Preference number: 4 (lower is better)
Translates to: SHVTLNRDLCLKLPASTQGKSDD*ISLSTV
Trigger: GACAGTCGATAGTGATATTCAGTCATCTGATTTTCC...TTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GATGAGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCACTGAATTTGGATACATaGGCATCATTAAATGATGGC +
Preference number: 4 (lower is better)
Translates to: DEIDFIFLGPFSTPTLFPLNLDT*ASLNDG
Trigger: GCCATCATTTAATGATGCTCATGTATCCAAATTCAG...TGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCTCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR TCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTTTGAAAAGACTCATCTaGACTACAACCAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTLKRLI*TTTRLE
Trigger: CTCAAGCCTGGTTGTAGTTCAGATGAGTCTTTTCAA...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GAGGGAAGAATCTCAAATGTCTGTAGTGTTCCACTGTTTAGTGTTATTGTTTCTTGGTTTCTGAGGGGGTaGAAACTGCTTAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: EGRISNVCSVPLFSVIVSWFLRG*KLLRFW
Trigger: CCAGAATCTAAGCAGTTTTCACCCCCTCAGAAACCA...AGAAACAATAACACTAAACAGTGGAACACTACAGACATTTGAGATTCTTCCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAAACACACTAAGTGGATaGCAAACTATTCTCTCGGTA +
Preference number: 4 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLNTLSG*QTILSV
Trigger: TACCGAGAGAATAGTTTGTCATCCACTTAGTGTGTT...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ACCAAATCTTCGACATCCTTTGAATCTTCTGAAACAGGACTGCCCAAGGATGATAACACACTAAGTGGATaGCAAACTATTCTCTCGGTA +
Preference number: 4 (lower is better)
Translates to: TKSSTSFESSETGLPKDDNTLSG*QTILSV
Trigger: TACCGAGAGAATAGTTTGTCATCCACTTAGTGTGTT...ATCATCCTTGGGCAGTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ACATCAAGTTCTGCTATCCTGAGGATGAGATTGATTTCATCTTCCTTGGTCCATTCCACAGTTGTTCCTTaGGCTTCTCAATTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: TSSSAILRMRLISSSLVHSTVVP*ASQFLQ
Trigger: CTGAAGAAATTGAGAAGCTCAAGGAACAACTGTGGA...ATGGACCAAGGAAGATGAAATCAATCTCATCCTCAGGATAGCAGAACTTGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412139.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp TCTGCTGAAGCAGGGAACGAAACATCCTTATGGTTTGCAATTTGCCTTTTGATGAATCCTCTTCCACTGTaGTCATACTCAAATCTAGAC +
Preference number: 4 (lower is better)
Translates to: SAEAGNETSLWFAICLLMNPLPL*SYSNLD
Trigger: GTCTAGATTTGAGTATGAGCACAGTGGAAGAGGATT...CATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCCCTGCTTCAGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584619.5
CDS-3UTR GCA 90 bp TTAAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGCTACTTCTGTGGTTaGAGTCATGGTCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: LKLPASTQLHTVIKLNLRCYFCG*SHGHFK
Trigger: TTTGAAGTGACCATGACTGCAACCACAGAAGTAGCA...TCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTTGCTACTTCTGTGGTTaGAGTCATGGTCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: GQVSNLVFLKIRRSLVSSCYFCG*SHGHFK
Trigger: TTTGAAGTGACCATGACTGCAACCACAGAAGTAGCA...AGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp AGTCTGAATGATGACTCTTGGTGTGTGACACTGCACTGTAACATTATCACTTGTAGTAACCTCATCATCTaGTACTTCTGTGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: SLNDDSWCVTLHCNIITCSNLII*YFCGCS
Trigger: ACTGCAACCACAGAAGTAGCAGATGATGAGGTTACT...ACAAGTGATAATGTTACAGTGCAGTGTCACACACCAAGAGTCATCATTCAGACT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCAGTTAATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGAGTAACCTCATCATCTaGTACTTCTGTGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: PVNVIFISYIKFCYPEDESNLII*YFCGCS
Trigger: ACTGCAACCACAGAAGTAGCAGATGATGAGGTTACT...CTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATTAACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp CCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTAGTTGCTCATTCTaGAAAATCTGTATCTGTGTC +
Preference number: 4 (lower is better)
Translates to: PLGGCSYFFEEVVINSVPSSCSF*KICICV
Trigger: GACACAGATACAGATTTTGCAGAATGAGCAACTAGA...AGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGTTGGACCACATCCCCTaGTTCCATTTATGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKLDHIP*FHLCPL
Trigger: TAAAGGACATAAATGGAAGCAGGGGATGTGGTCCAA...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTAATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGCCGGTTCAGACCCCATaGTATAGTCCTGTAGAAATC +
Preference number: 4 (lower is better)
Translates to: LMSFSSATSSSAILRMRLPVQTP*YSPVEI
Trigger: GATTTCTACAGGACTATAGCATGGGGTCTGAACCGG...CAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCACTCTTCTATAAACTaGAAACAAAGGCCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTHSSIN*KQRPVQ
Trigger: CTGAACCGGCCTTTGTTTGCAGTTTATAGAAGAGTG...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTTTGTTGCCCAGTCATTaGCATGCTTTATCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: FEEVVINSVPSLLELPISLLPSH*HALSGA
Trigger: AGCTCCGGATAAAGCATGGCAATGACTGGGCAACAA...AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000547146.6
ENST00000579850.5
CDS-3UTR GCA 90 bp TTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTTGTCACCTGGCTCAGTaGTTGTCAACTCATGAACCA +
Preference number: 4 (lower is better)
Translates to: FEEVVINSVPSLLELPISCHLAQ*LSTHEP
Trigger: TGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACA...AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTAATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGTGTCACCTGGCTCAGTaGTTGTCAACTCATGAACCA +
Preference number: 4 (lower is better)
Translates to: LMSFSSATSSSAILRMRLCHLAQ*LSTHEP
Trigger: TGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACA...CAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTCATTTAGAACGACATTaGTTTTCTGAGCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSHLERH*FSERVP
Trigger: CGGTACCCGCTCAGAAAAGCAATGTCGTTCTAAATG...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCAATTCAGAGCTACATCAAGTTCTaGTATCCTGAGGATGAGATT +
Preference number: 4 (lower is better)
Translates to: IDFIFLGPFSTPTLFPIQSYIKF*YPEDEI
Trigger: AATCTCATCCTCAGGATAGCAGAACTTGATGTAGCT...CTGAATTGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp CACCTGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCAAGTCTCTTTTCTTAACATCCTTATGGTTTaGAATTTGCCTTTTGATGGT +
Preference number: 4 (lower is better)
Translates to: HLAQCLSTHEPLLQVSFLNILMV*NLPFDG
Trigger: ACCATCAAAAGGCAAATTGCAAACCATAAGGATGTT...AAGAAAAGAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGATCTGGACTGGAATCTaGAATGCTGCCATGGGGCTA +
Preference number: 4 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVIWTGI*NAAMGL
Trigger: TAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGAT...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTATCGACTGTCAGTTCTaGTTGGGATATGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTIDCQF*LGYGRS
Trigger: ACTTCTTCCATATCCCAAGCAGAACTGACAGTCGAT...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTATCTATAACATCAGATaGCTGGATAAAGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: LTKCTTTRPPPRSLYLYAIYNIR*LDKAMW
Trigger: CCACATGGCTTTATCCAGGCATCTGATGTTATAGAT...AGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACTACAGTGTGCCTTCTTTaGTTGAACTGCCTATTTCTA +
Preference number: 4 (lower is better)
Translates to: PCNTKQGFMLKTPSLHSTTVCLL*LNCLFL
Trigger: TAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGT...AGTTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: VSILVCWSSLKLSLLEDQKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...CTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTGTCTCTATACTTGTATaGTGGTCAAGTCTCAAACTT +
Preference number: 4 (lower is better)
Translates to: PLGGCSYFFEEVVINSVPVSILV*WSSLKL
Trigger: AAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC...AGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGTTGTTGCCCAGTCATTaGCATGCTTTATCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVLLPSH*HALSGA
Trigger: GGCTCCGGATAAAGCATGGCAATGACTGGGCAACAA...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp TTAATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGAACACTTTCCTGTTTTaGGTCCGGGCACTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: LMSFSSATSSSAILRMRLNTFLF*VRALWK
Trigger: CTTCCAAAGTGCCCGGACCCAAAACAGGAAAGTGTT...CAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAAAACACTTTCCTGTTTTaGGTCCGGGCACTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNENTFLF*VRALWK
Trigger: CTTCCAAAGTGCCCGGACCCAAAACAGGAAAGTGTT...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331242.12
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTCTGTGGTTGCAGTCATaGTCACTTCAAAGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSLWLQS*SLQSSD
Trigger: ATCAGAGCTTTGAAGTGACCATGACTGCAACCACAG...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATTATCAATTTCTTCCTTaGACCACATCCCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PQQLSFRDSKLFLVAEVNYQFLP*TTSPAS
Trigger: GGAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATA...ATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTGCTGCACACTGGAATTaGTATTACTGTTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTAAHWN*YYCLEL
Trigger: GAGTTCCAAACAGTAATACCAATTCCAGTGTGCAGC...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGGAACATGCTGCACACTaGAATTGGTATTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMEHAAH*NWYYCL
Trigger: CAAACAGTAATACCAATTCCAGTGTGCAGCATGTTC...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp AGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCAATTCGAACATGCTGCACACTaGAATTGGTATTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: RLISSSLVHSVPPLCFQFEHAAH*NWYYCL
Trigger: CAAACAGTAATACCAATTCCAGTGTGCAGCATGTTC...GAATTGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp GTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGTCTGCTGAAGAAACATaGGTGATCTGGACTGGAATC +
Preference number: 4 (lower is better)
Translates to: VSILVCWSSLKLSLLEDQSAEET*VIWTGI
Trigger: GATTCCAGTCCAGATCACCCATGTTTCTTCAGCAGA...CTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GAGGGAAGAATCTCAAATGTCTGTAGTGTTCCACTGTTTAGTGTTATTGTTTCTCCAGTGGGCTGTAGATaGAAAGAGGGAAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: EGRISNVCSVPLFSVIVSPVGCR*KEGRIS
Trigger: TGAGATTCTTCCCTCTTTCCATCTACAGCCCACTGG...AGAAACAATAACACTAAACAGTGGAACACTACAGACATTTGAGATTCTTCCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTCTGAATGATGACTCTTaGTGTGTGACACTGCACTGT +
Preference number: 4 (lower is better)
Translates to: LVCWSSLKLSLLEDQKITLNDDS*CVTLHC
Trigger: ACAGTGCAGTGTCACACACCAAGAGTCATCATTCAG...AGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGGATGATGTTGGAGTATaGGATCTGTTAGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMDDVGV*DLLVLS
Trigger: TGACAACACTAACAGATCCCATACTCCAACATCATC...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ACCAAATCTTCGACATCCTTTGAATCTTCTGAAACAGGACTGCCCAAGGATGATGATGATGTTGGAGTATaGGATCTGTTAGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: TKSSTSFESSETGLPKDDDDVGV*DLLVLS
Trigger: TGACAACACTAACAGATCCCATACTCCAACATCATC...ATCATCCTTGGGCAGTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGTCCCACTGCCAGCAATaGGTTAACCAAATGTACCAC +
Preference number: 4 (lower is better)
Translates to: SYFFEEVVINSVPSLLELSHCQQ*VNQMYH
Trigger: GTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGA...CAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTTTCTTCCCATTTGACTaGTTTGGAAGTTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSFFPFD*FGSCGQ
Trigger: CTGCCCACAACTTCCAAACCAGTCAAATGGGAAGAA...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp TCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAAGATGATGTTGGAGTATaGGATCTCAGTAACATAAGC +
Preference number: 4 (lower is better)
Translates to: SHVTLNRDLCLKLPASTQDDVGV*DLSNIS
Trigger: GCTTATGTTACTGAGATCCCATACTCCAACATCATC...TTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454008.6
CDS-3UTR TCA 90 bp GTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTAGACCAGAATCATCAATACTCTaGTCATCCTCAGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: VSNLVFLKIRRSLVSSRPESSIL*SSSEDK
Trigger: TTTGTCCTCTGAGGATGATCAGAGTATTGATGATTC...TGGTCTAGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp ACATCAAGTTCTGCTATCCTGAGGATGAGATTGATTTCATCTTCCTTGGTCCATGAATCATCAATACTCTaGTCATCCTCAGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: TSSSAILRMRLISSSLVHESSIL*SSSEDK
Trigger: TTTGTCCTCTGAGGATGATCAGAGTATTGATGATTC...ATGGACCAAGGAAGATGAAATCAATCTCATCCTCAGGATAGCAGAACTTGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAATTATCCGGAGCTCCTTaGGCTTCTCAATTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNELSGAP*ASQFLQ
Trigger: CTGAAGAAATTGAGAAGCTCAAGGAGCTCCGGATAA...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000547146.6
ENST00000579850.5
CDS-3UTR TCA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCTCTGGGGATAAAGCATaGACAATAATCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLSGDKA*TIICSG
Trigger: TCCTGAACAGATTATTGTTCATGCTTTATCCCCAGA...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTAGACCATCTGGGGATAAAGCATaGACAATAATCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: VSNLVFLKIRRSLVSSRPSGDKA*TIICSG
Trigger: TCCTGAACAGATTATTGTTCATGCTTTATCCCCAGA...TGGTCTAGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTTCTGGGGATAAAGCATaGACAATAATCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTSGDKA*TIICSG
Trigger: TCCTGAACAGATTATTGTTCATGCTTTATCCCCAGA...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTACTGAATTTGGATACATaGGCATCATTAAATGATGGC +
Preference number: 4 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLLNLDT*ASLNDG
Trigger: GCCATCATTTAATGATGCTCATGTATCCAAATTCAG...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTGATAAAGCCATGTGGTaGAGGAACGATAAGTATTGT +
Preference number: 4 (lower is better)
Translates to: GQVSNLVFLKIRRSLVSSDKAMW*RNDKYC
Trigger: ACAATACTTATCGTTCCTTCACCACATGGCTTTATC...AGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CCAGTTAATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGGATAAAGCCATGTGGTaGAGGAACGATAAGTATTGT +
Preference number: 4 (lower is better)
Translates to: PVNVIFISYIKFCYPEDEDKAMW*RNDKYC
Trigger: ACAATACTTATCGTTCCTTCACCACATGGCTTTATC...CTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATTAACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR TCA 90 bp GTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAGACAGTGCCATGTCTaGTCTTTAGAGAAACTGTAC +
Preference number: 4 (lower is better)
Translates to: VSILVCWSSLKLSLLEDQRQCHV*SLEKLY
Trigger: GTACAGTTTCTCTAAAGATCAGACATGGCACTGTCT...CTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTAGACAGTGCCATGTCTaGTCTTTAGAGAAACTGTAC +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSRQCHV*SLEKLY
Trigger: GTACAGTTTCTCTAAAGATCAGACATGGCACTGTCT...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TGTCAAAGGCAAGACAGATTCAGTATCTATAACATCAGATGCCTGGATAAAGCCAACACACTAAGTGGATaGCAAACTATTCTCTCGGTA +
Preference number: 4 (lower is better)
Translates to: CQRQDRFSIYNIRCLDKANTLSG*QTILSV
Trigger: TACCGAGAGAATAGTTTGTCATCCACTTAGTGTGTT...GGCTTTATCCAGGCATCTGATGTTATAGATACTGAATCTGTCTTGCCTTTGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGTGCTACTTCTGTGGTTaGAGTCATGGTCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: VSILVCWSSLKLSLLEDQCYFCG*SHGHFK
Trigger: TTTGAAGTGACCATGACTGCAACCACAGAAGTAGCA...CTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTAGCTACATCAAGTTCTaGTATCCTGAGGATGAGATT +
Preference number: 4 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTSYIKF*YPEDEI
Trigger: AATCTCATCCTCAGGATAGCAGAACTTGATGTAGCT...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACTTTATGGTTTGCAATTTaGCTTTTGATGGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: PCNTKQGFMLKTPSLHSTLWFAI*LLMVHH
Trigger: ATGGTGGACCATCAAAAGGCAAATTGCAAACCATAA...AGTTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GATGAGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCAAACATCCTTATGGTTTaGAATTTGCCTTTTGATGGT +
Preference number: 4 (lower is better)
Translates to: DEIDFIFLGPFSTPTLFPNILMV*NLPFDG
Trigger: ACCATCAAAAGGCAAATTGCAAACCATAAGGATGTT...TGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCTCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp CCACTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAAACATCCTTATGGTTTaGAATTTGCCTTTTGATGGT +
Preference number: 4 (lower is better)
Translates to: PLFSVIVSESTVAGESAENILMV*NLPFDG
Trigger: ACCATCAAAAGGCAAATTGCAAACCATAAGGATGTT...TTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
ENST00000584619.5
CDS-3UTR GCA 90 bp TTGGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCTCCAAAAGCGTTGGGATCTATAACATCAGATaGCTGGATAAAGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: LVLLFGTPDPDLFSKSVGIYNIR*LDKAMW
Trigger: CCACATGGCTTTATCCAGGCATCTGATGTTATAGAT...CCCAACGCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR GCA 90 bp GTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTAGACCAACAGTGTGCCTTCTTTaGTTGAACTGCCTATTTCTA +
Preference number: 4 (lower is better)
Translates to: VSNLVFLKIRRSLVSSRPTVCLL*LNCLFL
Trigger: TAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGT...TGGTCTAGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAAAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNEKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGAAGCCTCTTGGGGGTTaGTCCTATTTCTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SYFFEEVVINSVPSLLELKPLGG*SYFFEE
Trigger: CTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTT...CAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp AGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCAATTCGTCTCTATACTTGTATaGTGGTCAAGTCTCAAACTT +
Preference number: 4 (lower is better)
Translates to: RLISSSLVHSVPPLCFQFVSILV*WSSLKL
Trigger: AAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC...GAATTGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR GCA 90 bp CCAGTTAATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGCCTAAAACAAGAGTCTaGCAATCAGCATTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: PVNVIFISYIKFCYPEDEPKTRV*QSAFGS
Trigger: TGAACCAAATGCTGATTGGCAGACTCTTGTTTTAGG...CTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATTAACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp TTGGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCTCCAAAAGCGTTGGGAATCCTCTTCCACTGTaGTCATACTCAAATTTCCTG +
Preference number: 4 (lower is better)
Translates to: LVLLFGTPDPDLFSKSVGNPLPL*SYSNFL
Trigger: CAGGAAATTTGAGTATGAGCACAGTGGAAGAGGATT...CCCAACGCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547146.6
CDS-3UTR CCA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATCATCTGCTACTTCTGTaGTTGCAGTCATGGTCACTT +
Preference number: 4 (lower is better)
Translates to: EVVINSVPSLLELPISKNHLLLL*LQSWSL
Trigger: AAGTGACCATGACTGCAACCACAGAAGTAGCAGATG...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp GTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGGTTGTAAACCATGCTTaGCTAACTGCTGAAACTTCC +
Preference number: 4 (lower is better)
Translates to: VSILVCWSSLKLSLLEDQVVNHA*LTAETS
Trigger: GGAAGTTTCAGCAGTTAGCCAAGCATGGTTTACAAC...CTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TTAATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGTATCAATTTCTTCCTTaGACCACATCCCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LMSFSSATSSSAILRMRLYQFLP*TTSPAS
Trigger: GGAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATA...CAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAATATCAATTTCTTCCTTaGACCACATCCCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNEYQFLP*TTSPAS
Trigger: GGAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATA...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGTATCAATTTCTTCCTTaGACCACATCCCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SYFFEEVVINSVPSLLELYQFLP*TTSPAS
Trigger: GGAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATA...CAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGGAACATGCTGCACACTaGAATTGGTATTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKEHAAH*NWYYCL
Trigger: CAAACAGTAATACCAATTCCAGTGTGCAGCATGTTC...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp TCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGGAAACATGGGTGATCTaGACTGGAATCTGCAATGCT +
Preference number: 4 (lower is better)
Translates to: SYFFEEVVINSVPSLLELETWVI*TGICNA
Trigger: AGCATTGCAGATTCCAGTCCAGATCACCCATGTTTC...CAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGATTTCATCTCTGCTGAAGAAACATaGGTGATCTGGACTGGAATC +
Preference number: 4 (lower is better)
Translates to: IFISYIKFCYPEDEIDFISAEET*VIWTGI
Trigger: GATTCCAGTCCAGATCACCCATGTTTCTTCAGCAGA...GATGAAATCAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGCCAGTGGGCTGTAGATaGAAAGAGGGAAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVPVGCR*KEGRIS
Trigger: TGAGATTCTTCCCTCTTTCCATCTACAGCCCACTGG...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp AGGATGAGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCAGTTCTGTGCTATTTTaGTCACTGAATTTGGATACA +
Preference number: 4 (lower is better)
Translates to: RMRLISSSLVHSVPPLCFSSVLF*SLNLDT
Trigger: TGTATCCAAATTCAGTGACCAAAATAGCACAGAACT...GAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCTCATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATCAGCAACAATGTGTGTaGCTTAAGGACTGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: EVVINSVPSLLELPISKNQQQCV*LKDCGY
Trigger: ATAGCCACAGTCCTTAAGCCACACACATTGTTGCTG...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACTGCTTAGATTCTGGTaGGTTTTGTTACTATGCTTA +
Preference number: 4 (lower is better)
Translates to: SHVTLNRDLCLKLPASTQLLRFW*VLLLCL
Trigger: TAAGCATAGTAACAAAACCCACCAGAATCTAAGCAG...TTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TGTCAAAGGCAAGACAGATTCAGTATCTATAACATCAGATGCCTGGATAAAGCCTTCAATACTATCTTCTaGGTCTATTTCATCCGCTTC +
Preference number: 4 (lower is better)
Translates to: CQRQDRFSIYNIRCLDKAFNTIF*VYFIRF
Trigger: GAAGCGGATGAAATAGACTCAGAAGATAGTATTGAA...GGCTTTATCCAGGCATCTGATGTTATAGATACTGAATCTGTCTTGCCTTTGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp CCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATTCTGGGGATAAAGCATaGACAATAATCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: PQQLSFRDSKLFLVAEVNSGDKA*TIICSG
Trigger: TCCTGAACAGATTATTGTTCATGCTTTATCCCCAGA...ATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGATGACTCTTGGTGTGTaGCACTGCACTGTAACATTA +
Preference number: 4 (lower is better)
Translates to: SYFFEEVVINSVPSLLELMTLGV*HCTVTL
Trigger: TAATGTTACAGTGCAGTGTCACACACCAAGAGTCAT...CAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTATGACTCTTGGTGTGTaGCACTGCACTGTAACATTA +
Preference number: 4 (lower is better)
Translates to: FFEEVVINSVPSLLELPIMTLGV*HCTVTL
Trigger: TAATGTTACAGTGCAGTGTCACACACCAAGAGTCAT...AATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGGAAAATCAGATGACTaGATATCACTATCGACTGTC +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSGKSDD*ISLSTV
Trigger: GACAGTCGATAGTGATATTCAGTCATCTGATTTTCC...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCTGAATTTGGATACATaGGCATCATTAAATGATGGC +
Preference number: 4 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLLNLDT*ASLNDG
Trigger: GCCATCATTTAATGATGCTCATGTATCCAAATTCAG...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTCTGAATTTGGATACATaGGCATCATTAAATGATGGC +
Preference number: 4 (lower is better)
Translates to: GQVSNLVFLKIRRSLVSSLNLDT*ASLNDG
Trigger: GCCATCATTTAATGATGCTCATGTATCCAAATTCAG...AGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TTAAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGACTGAATTTGGATACATaGGCATCATTAAATGATGGC +
Preference number: 4 (lower is better)
Translates to: LKLPASTQLHTVIKLNLRLNLDT*ASLNDG
Trigger: GCCATCATTTAATGATGCTCATGTATCCAAATTCAG...TCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGATAAAGCCATGTGGTaGAGGAACGATAAGTATTGT +
Preference number: 4 (lower is better)
Translates to: LVCWSSLKLSLLEDQKITDKAMW*RNDKYC
Trigger: ACAATACTTATCGTTCCTTCACCACATGGCTTTATC...AGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TTAAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGACCAAGGATGATCCAATaGTATTTGATTCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: LKLPASTQLHTVIKLNLRPRMIQ*YLILPD
Trigger: ATCAGGAAGAATCAAATATCATTGGATCATCCTTGG...TCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATAGACAGTGCCATGTCTaGTCTTTAGAGAAACTGTAC +
Preference number: 4 (lower is better)
Translates to: EVVINSVPSLLELPISKNRQCHV*SLEKLY
Trigger: GTACAGTTTCTCTAAAGATCAGACATGGCACTGTCT...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TTAATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGAGACAGTGCCATGTCTaGTCTTTAGAGAAACTGTAC +
Preference number: 4 (lower is better)
Translates to: LMSFSSATSSSAILRMRLRQCHV*SLEKLY
Trigger: GTACAGTTTCTCTAAAGATCAGACATGGCACTGTCT...CAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR TCA 90 bp GAGGGAAGAATCTCAAATGTCTGTAGTGTTCCACTGTTTAGTGTTATTGTTTCTTTGAAAAGACTCATCTaGACTACAACCAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: EGRISNVCSVPLFSVIVSLKRLI*TTTRLE
Trigger: CTCAAGCCTGGTTGTAGTTCAGATGAGTCTTTTCAA...AGAAACAATAACACTAAACAGTGGAACACTACAGACATTTGAGATTCTTCCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGATTTCATCATGCTAGTGATTCTATaGACTGTAGACTGTGGTACC +
Preference number: 4 (lower is better)
Translates to: IFISYIKFCYPEDEIDFIMLVIL*TVDCGT
Trigger: GGTACCACAGTCTACAGTTCATAGAATCACTAGCAT...GATGAAATCAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412139.6
CDS-3UTR TCA 90 bp TTAATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGTCCACAGTTGTTCCTTaGGCTTCTCAATTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LMSFSSATSSSAILRMRLSTVVP*ASQFLQ
Trigger: CTGAAGAAATTGAGAAGCTCAAGGAACAACTGTGGA...CAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412139.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR TCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAAAGACAAAAAGAACATTaGTTCTCCGACAGACCACCA +
Preference number: 4 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNERQKEH*FSDRPP
Trigger: TGGTGGTCTGTCGGAGAATCAATGTTCTTTTTGTCT...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425406.5
CDS-3UTR GCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTAATCCTCTTCCACTGTaGTCATACTCAAATCTAGAC +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSNPLPL*SYSNLD
Trigger: GTCTAGATTTGAGTATGAGCACAGTGGAAGAGGATT...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTAGTAACCTCATCATCTaGTACTTCTGTGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: FFEEVVINSVPSLLELPISNLII*YFCGCS
Trigger: ACTGCAACCACAGAAGTAGCAGATGATGAGGTTACT...AATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATAGTAACCTCATCATCTaGTACTTCTGTGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: EVVINSVPSLLELPISKNSNLII*YFCGCS
Trigger: ACTGCAACCACAGAAGTAGCAGATGATGAGGTTACT...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAGTAACCTCATCATCTaGTACTTCTGTGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: FEEVVINSVPSLLELPISSNLII*YFCGCS
Trigger: ACTGCAACCACAGAAGTAGCAGATGATGAGGTTACT...AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTAGACCATCTAGTTGCTCATTCTaGAAAATCTGTATCTGTGTC +
Preference number: 4 (lower is better)
Translates to: VSNLVFLKIRRSLVSSRPSSCSF*KICICV
Trigger: GACACAGATACAGATTTTGCAGAATGAGCAACTAGA...TGGTCTAGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTTGGACCACATCCCCTaGTTCCATTTATGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: FFEEVVINSVPSLLELPILDHIP*FHLCPL
Trigger: TAAAGGACATAAATGGAAGCAGGGGATGTGGTCCAA...AATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTCACTCTTCTATAAACTaGAAACAAAGGCCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: FFEEVVINSVPSLLELPIHSSIN*KQRPVQ
Trigger: CTGAACCGGCCTTTGTTTGCAGTTTATAGAAGAGTG...AATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGCATTTAGAACGACATTaGTTTTCTGAGCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVHLERH*FSERVP
Trigger: CGGTACCCGCTCAGAAAAGCAATGTCGTTCTAAATG...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAGCTACATCAAGTTCTaGTATCCTGAGGATGAGATT +
Preference number: 4 (lower is better)
Translates to: VSILVCWSSLKLSLLEDQSYIKF*YPEDEI
Trigger: AATCTCATCCTCAGGATAGCAGAACTTGATGTAGCT...CTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGAACATCCTTATGGTTTaGAATTTGCCTTTTGATGGT +
Preference number: 4 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMNILMV*NLPFDG
Trigger: ACCATCAAAAGGCAAATTGCAAACCATAAGGATGTT...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAAACATCCTTATGGTTTaGAATTTGCCTTTTGATGGT +
Preference number: 4 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLNILMV*NLPFDG
Trigger: ACCATCAAAAGGCAAATTGCAAACCATAAGGATGTT...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAAATCGACTGTCAGTTCTaGTTGGGATATGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNEIDCQF*LGYGRS
Trigger: ACTTCTTCCATATCCCAAGCAGAACTGACAGTCGAT...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTACAGTGTGCCTTCTTTaGTTGAACTGCCTATTTCTA +
Preference number: 4 (lower is better)
Translates to: LVCWSSLKLSLLEDQKITTVCLL*LNCLFL
Trigger: TAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGT...AGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTTTCAATCTGGTACTTTaGATGAGCACTAAACCCACT +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSFNLVL*MSTKPT
Trigger: AGTGGGTTTAGTGCTCATGCAAAGTACCAGATTGAA...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547146.6
CDS-3UTR CCA 90 bp TTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTGCTGCACACTGGAATTaGTATTACTGTTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: FEEVVINSVPSLLELPISAAHWN*YYCLEL
Trigger: GAGTTCCAAACAGTAATACCAATTCCAGTGTGCAGC...AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGTCTGCTGAAGAAACATaGGTGATCTGGACTGGAATC +
Preference number: 4 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVSAEET*VIWTGI
Trigger: GATTCCAGTCCAGATCACCCATGTTTCTTCAGCAGA...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACTAGTTCTGTGCTATTTTaGTCACTGAATTTGGATACA +
Preference number: 4 (lower is better)
Translates to: PCNTKQGFMLKTPSLHSTSSVLF*SLNLDT
Trigger: TGTATCCAAATTCAGTGACCAAAATAGCACAGAACT...AGTTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGATGATGTTGGAGTATaGGATCTGTTAGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSDDVGV*DLLVLS
Trigger: TGACAACACTAACAGATCCCATACTCCAACATCATC...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGCAGCAACAATGTGTGTaGCTTAAGGACTGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVQQQCV*LKDCGY
Trigger: ATAGCCACAGTCCTTAAGCCACACACATTGTTGCTG...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCTGCTTAGATTCTGGTaGGTTTTGTTACTATGCTTA +
Preference number: 4 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLLLRFW*VLLLCL
Trigger: TAAGCATAGTAACAAAACCCACCAGAATCTAAGCAG...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCTGCTTAGATTCTGGTaGGTTTTGTTACTATGCTTA +
Preference number: 4 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTLLRFW*VLLLCL
Trigger: TAAGCATAGTAACAAAACCCACCAGAATCTAAGCAG...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGGGAAAATCAGATGACTaGATATCACTATCGACTGTC +
Preference number: 4 (lower is better)
Translates to: SYFFEEVVINSVPSLLELGKSDD*ISLSTV
Trigger: GACAGTCGATAGTGATATTCAGTCATCTGATTTTCC...CAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTGGAAAATCAGATGACTaGATATCACTATCGACTGTC +
Preference number: 4 (lower is better)
Translates to: FFEEVVINSVPSLLELPIGKSDD*ISLSTV
Trigger: GACAGTCGATAGTGATATTCAGTCATCTGATTTTCC...AATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTCTGAATTTGGATACATaGGCATCATTAAATGATGGC +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSLNLDT*ASLNDG
Trigger: GCCATCATTTAATGATGCTCATGTATCCAAATTCAG...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAAGATAAAGCCATGTGGTaGAGGAACGATAAGTATTGT +
Preference number: 4 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNEDKAMW*RNDKYC
Trigger: ACAATACTTATCGTTCCTTCACCACATGGCTTTATC...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTAATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGAATCCTCTTCCACTGTaGTCATACTCAAATCTAGAC +
Preference number: 4 (lower is better)
Translates to: LMSFSSATSSSAILRMRLNPLPL*SYSNLD
Trigger: GTCTAGATTTGAGTATGAGCACAGTGGAAGAGGATT...CAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR GCA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGCACTCTTCTATAAACTaGAAACAAAGGCCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVHSSIN*KQRPVQ
Trigger: CTGAACCGGCCTTTGTTTGCAGTTTATAGAAGAGTG...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAAAGCTACATCAAGTTCTaGTATCCTGAGGATGAGATT +
Preference number: 4 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNESYIKF*YPEDEI
Trigger: AATCTCATCCTCAGGATAGCAGAACTTGATGTAGCT...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTTTATGGTTTGCAATTTaGCTTTTGATGGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: LVCWSSLKLSLLEDQKITLWFAI*LLMVHH
Trigger: ATGGTGGACCATCAAAAGGCAAATTGCAAACCATAA...AGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTAACATCCTTATGGTTTaGAATTTGCCTTTTGATGGT +
Preference number: 4 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTNILMV*NLPFDG
Trigger: ACCATCAAAAGGCAAATTGCAAACCATAAGGATGTT...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGAACATCCTTATGGTTTaGAATTTGCCTTTTGATGGT +
Preference number: 4 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKNILMV*NLPFDG
Trigger: ACCATCAAAAGGCAAATTGCAAACCATAAGGATGTT...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTCTCTATACTTGTATaGTGGTCAAGTCTCAAACTT +
Preference number: 4 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSVSILV*WSSLKL
Trigger: AAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTCCTAAAACAAGAGTCTaGCAATCAGCATTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: FEEVVINSVPSLLELPISPKTRV*QSAFGS
Trigger: TGAACCAAATGCTGATTGGCAGACTCTTGTTTTAGG...AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR GCA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATCCTAAAACAAGAGTCTaGCAATCAGCATTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: EVVINSVPSLLELPISKNPKTRV*QSAFGS
Trigger: TGAACCAAATGCTGATTGGCAGACTCTTGTTTTAGG...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CCA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCAGTTCTGTGCTATTTTaGTCACTGAATTTGGATACA +
Preference number: 4 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLSSVLF*SLNLDT
Trigger: TGTATCCAAATTCAGTGACCAAAATAGCACAGAACT...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTGATGATGTTGGAGTATaGGATCTGTTAGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: FFEEVVINSVPSLLELPIDDVGV*DLLVLS
Trigger: TGACAACACTAACAGATCCCATACTCCAACATCATC...AATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAAGATGATGTTGGAGTATaGGATCTGTTAGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNEDDVGV*DLLVLS
Trigger: TGACAACACTAACAGATCCCATACTCCAACATCATC...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CTGGAATTGGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCTCCAAAAGCCTGCTTAGATTCTGGTaGGTTTTGTTACTATGCTTA +
Preference number: 4 (lower is better)
Translates to: LELVLLFGTPDPDLFSKSLLRFW*VLLLCL
Trigger: TAAGCATAGTAACAAAACCCACCAGAATCTAAGCAG...GCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAATTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CCA 90 bp TTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTCAGATACAATCAGGCTaGTTTTTGTGCTTTCTACTC +
Preference number: 4 (lower is better)
Translates to: FEEVVINSVPSLLELPISQIQSG*FLCFLL
Trigger: GAGTAGAAAGCACAAAAACCAGCCTGATTGTATCTG...AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394703.9
CDS-3UTR TCA 90 bp TTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTTCAATACTATCTTCTaGGTCTATTTCATCCGCTTC +
Preference number: 4 (lower is better)
Translates to: FFEEVVINSVPSLLELPIFNTIF*VYFIRF
Trigger: GAAGCGGATGAAATAGACTCAGAAGATAGTATTGAA...AATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAATTCAATACTATCTTCTaGGTCTATTTCATCCGCTTC +
Preference number: 4 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNEFNTIF*VYFIRF
Trigger: GAAGCGGATGAAATAGACTCAGAAGATAGTATTGAA...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR TCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAACTGAATTTGGATACATaGGCATCATTAAATGATGGC +
Preference number: 4 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNELNLDT*ASLNDG
Trigger: GCCATCATTTAATGATGCTCATGTATCCAAATTCAG...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp TTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTCCAAGGATGATCCAATaGTATTTGATTCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: FFEEVVINSVPSLLELPIPRMIQ*YLILPD
Trigger: ATCAGGAAGAATCAAATATCATTGGATCATCCTTGG...AATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR TCA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATCCAAGGATGATCCAATaGTATTTGATTCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: EVVINSVPSLLELPISKNPRMIQ*YLILPD
Trigger: ATCAGGAAGAATCAAATATCATTGGATCATCCTTGG...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAGTTGCTCATTCTaGAAAATCTGTATCTGTGTC +
Preference number: 4 (lower is better)
Translates to: FFEEVVINSVPSLLELPISSCSF*KICICV
Trigger: GACACAGATACAGATTTTGCAGAATGAGCAACTAGA...AATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGAGCTACATCAAGTTCTaGTATCCTGAGGATGAGATT +
Preference number: 4 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVSYIKF*YPEDEI
Trigger: AATCTCATCCTCAGGATAGCAGAACTTGATGTAGCT...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAATTATGGTTTGCAATTTaGCTTTTGATGGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNELWFAI*LLMVHH
Trigger: ATGGTGGACCATCAAAAGGCAAATTGCAAACCATAA...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTTATGGTTTGCAATTTaGCTTTTGATGGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: FFEEVVINSVPSLLELPILWFAI*LLMVHH
Trigger: ATGGTGGACCATCAAAAGGCAAATTGCAAACCATAA...AATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATAACATCCTTATGGTTTaGAATTTGCCTTTTGATGGT +
Preference number: 4 (lower is better)
Translates to: PQQLSFRDSKLFLVAEVNNILMV*NLPFDG
Trigger: ACCATCAAAAGGCAAATTGCAAACCATAAGGATGTT...ATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGATCTATAACATCAGATaGCTGGATAAAGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVIYNIR*LDKAMW
Trigger: CCACATGGCTTTATCCAGGCATCTGATGTTATAGAT...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATGTCTCTATACTTGTATaGTGGTCAAGTCTCAAACTT +
Preference number: 4 (lower is better)
Translates to: EVVINSVPSLLELPISKNVSILV*WSSLKL
Trigger: AAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp TTAATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGGTCTCTATACTTGTATaGTGGTCAAGTCTCAAACTT +
Preference number: 4 (lower is better)
Translates to: LMSFSSATSSSAILRMRLVSILV*WSSLKL
Trigger: AAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC...CAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR GCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAAGTCTCTATACTTGTATaGTGGTCAAGTCTCAAACTT +
Preference number: 4 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNEVSILV*WSSLKL
Trigger: AAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGATGATGTTGGAGTATaGGATCTGTTAGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVDDVGV*DLLVLS
Trigger: TGACAACACTAACAGATCCCATACTCCAACATCATC...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAACTGCTTAGATTCTGGTaGGTTTTGTTACTATGCTTA +
Preference number: 4 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNELLRFW*VLLLCL
Trigger: TAAGCATAGTAACAAAACCCACCAGAATCTAAGCAG...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR GCA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATAACATCCTTATGGTTTaGAATTTGCCTTTTGATGGT +
Preference number: 4 (lower is better)
Translates to: EVVINSVPSLLELPISKNNILMV*NLPFDG
Trigger: ACCATCAAAAGGCAAATTGCAAACCATAAGGATGTT...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAAAGTTCTGTGCTATTTTaGTCACTGAATTTGGATACA +
Preference number: 4 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNESSVLF*SLNLDT
Trigger: TGTATCCAAATTCAGTGACCAAAATAGCACAGAACT...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CCA 90 bp TTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTAGTTCTGTGCTATTTTaGTCACTGAATTTGGATACA +
Preference number: 4 (lower is better)
Translates to: FFEEVVINSVPSLLELPISSVLF*SLNLDT
Trigger: TGTATCCAAATTCAGTGACCAAAATAGCACAGAACT...AATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS GCA 90 bp GGCAGCTGCAACGTCAGGAAGGCCAGGCTCCGACCCCGCCCGCAGTaGCCCGGCGCCGACAGCTTGCGCCAGCCGGCGGGAGCTAGCGGG +
Preference number: 5 (lower is better)
Translates to: GSCNVRKARLRPRPQ*PGADSLRQPAGASG
Trigger: CCCGCTAGCTCCCGCCGGCTGGCGCAAGCTGTCGGCGCCGGGGCACTGCGGGCGGGGTCGGAGCCTGGCCTTCCTGACGTTGCAGCTGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394703.9
ENST00000434534.5
ENST00000579592.5
ENST00000580710.5
ENST00000584457.5
CDS GCA 90 bp GGCCCTAAGAGGGAGGCCCTGGCCGGAACGTGCGGGGACGGCAGCTaGAACGTCAGGAAGGCCAGGCTCCGACCCCGCCCGCAGTGCCCC +
Preference number: 5 (lower is better)
Translates to: GPKREALAGTCGDGS*NVRKARLRPRPQCP
Trigger: GGGGCACTGCGGGCGGGGTCGGAGCCTGGCCTTCCTGACGTTGCAGCTGCCGTCCCCGCACGTTCCGGCCAGGGCCTCCCTCTTAGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394703.9
ENST00000434534.5
ENST00000579592.5
ENST00000580710.5
ENST00000584457.5
CDS GCA 90 bp CCACGGGCACCGCCCGGCCCTAAGAGGGAGGCCCTGGCCGGAACGTaGGGGGACGGCAGCTGCAACGTCAGGAAGGCCAGGCTCCGACCC +
Preference number: 5 (lower is better)
Translates to: PRAPPGPKREALAGT*GDGSCNVRKARLRP
Trigger: GGGTCGGAGCCTGGCCTTCCTGACGTTGCAGCTGCCGTCCCCGCACGTTCCGGCCAGGGCCTCCCTCTTAGGGCCGGGCGGTGCCCGTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394703.9
ENST00000434534.5
ENST00000579592.5
ENST00000580710.5
ENST00000584457.5
CDS GCA 90 bp CGCCGGATCGCCGCTGTGCCTCGGCAGCCGCTCGCTTCCCTACTCTaGAGCCTGAGCCACGGGCACCGCCCGGCCCTAAGAGGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: RRIAAVPRQPLASLL*SLSHGHRPALRGRP
Trigger: GGGCCTCCCTCTTAGGGCCGGGCGGTGCCCGTGGCTCAGGCTGCAGAGTAGGGAAGCGAGCGGCTGCCGAGGCACAGCGGCGATCCGGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580710.5
CDS CCA 90 bp TGCAGCCTGAGCCACGGGCACCGCCCGGCCCTAAGAGGGAGGCCCTaGCCGGAACGTGCGGGGACGGCAGCTGCAACGTCAGGAAGGCCA +
Preference number: 5 (lower is better)
Translates to: CSLSHGHRPALRGRP*PERAGTAAATSGRP
Trigger: TGGCCTTCCTGACGTTGCAGCTGCCGTCCCCGCACGTTCCGGCCAGGGCCTCCCTCTTAGGGCCGGGCGGTGCCCGTGGCTCAGGCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394703.9
ENST00000434534.5
ENST00000579592.5
ENST00000580710.5
ENST00000584457.5
CDS TCA 90 bp CAGGATGGAGGAAGCAGCCACGGGCGAGAGTGGCTGCAGCTGGAGTaGGCGAGCGCGACGAGCCACCGGAAACGGAGCTGCGGCCGCGCC +
Preference number: 5 (lower is better)
Translates to: QDGGSSHGREWLQLE*ASATSHRKRSCGRA
Trigger: GGCGCGGCCGCAGCTCCGTTTCCGGTGGCTCGTCGCGCTCGCTCACTCCAGCTGCAGCCACTCTCGCCCGTGGCTGCTTCCTCCATCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413276.6
CDS CCA 90 bp AATACCAGGATGGAGGAAGCAGCCACGGGCGAGAGTGGCTGCAGCTaGAGTGAGCGAGCGCGACGAGCCACCGGAAACGGAGCTGCGGCC +
Preference number: 5 (lower is better)
Translates to: NTRMEEAATGESGCS*SERARRATGNGAAA
Trigger: GGCCGCAGCTCCGTTTCCGGTGGCTCGTCGCGCTCGCTCACTCCAGCTGCAGCCACTCTCGCCCGTGGCTGCTTCCTCCATCCTGGTATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413276.6
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp TCTGAGCGGGTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGCTAGCGCCGCCCCTATaGTTGCCCAGTCATTGCCAT +
Preference number: 5 (lower is better)
Translates to: SERVPTRSATAAQDTPCVLAPPL*LPSHCH
Trigger: ATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAG...CACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTACCCGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp GCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTTAGGGGAAGGCCTGCGCCGCCCCTATTGTaGCCCAGTCATTGCCATGCT +
Preference number: 5 (lower is better)
Translates to: AAAVRVTVGLAVRVRGRPAPPLL*PSHCHA
Trigger: AGCATGGCAATGACTGGGCAACAATAGGGGCGGCGC...AGGCCTTCCCCTAACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TTCCTAGCGCCGCCCCTATTGTTGCCCAGTCATTGCCATGCTTTATCCGGAGCCCTAGCGCCGCCCCTATaGTTGCCCAGTCATTGCCAT +
Preference number: 5 (lower is better)
Translates to: FLAPPLLLPSHCHALSGALAPPL*LPSHCH
Trigger: ATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAG...GGCTCCGGATAAAGCATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp GTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCACTAGCGCCGCCCCTATaGTTGCCCAGTCATTGCCAT +
Preference number: 5 (lower is better)
Translates to: VPTRSATAAQDTPCVTMSLAPPL*LPSHCH
Trigger: ATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAG...TGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp GGAGAAGCAGGAGCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTTCTAGCGCCGCCCCTATaGTTGCCCAGTCATTGCCAT +
Preference number: 5 (lower is better)
Translates to: GEAGAAAVRVTVGLAVRVLAPPL*LPSHCH
Trigger: ATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAG...AACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGCTCCTGCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp AGGAGAAGCAGGAGCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTTTGGGTCCGGGCACTTaGGAAGAACCAGGATGGAAG +
Preference number: 5 (lower is better)
Translates to: RRSRSSSCQGYCGTSSQSLGPGT*EEPGWK
Trigger: CTTCCATCCTGGTTCTTCCAAAGTGCCCGGACCCAA...ACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGCTCCTGCTTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTTTGGGTCCGGGCACTTaGGAAGAACCAGGATGGAAG +
Preference number: 5 (lower is better)
Translates to: APTASNGLTKCTTTRPPPLGPGT*EEPGWK
Trigger: CTTCCATCCTGGTTCTTCCAAAGTGCCCGGACCCAA...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TCTGAGCGGGTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGATATCAATTTCTTCCTaGGACCACATCCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SERVPTRSATAAQDTPCVISISS*DHIPCF
Trigger: GAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATAT...CACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTACCCGCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp TTCCTAGCGCCGCCCCTATTGTTGCCCAGTCATTGCCATGCTTTATCCGGAGCCATTGTTGCCCAGTCATaGCCATGCTTTATCCGGAGC +
Preference number: 5 (lower is better)
Translates to: FLAPPLLLPSHCHALSGAIVAQS*PCFIRS
Trigger: GCTCCGGATAAAGCATGGCAATGACTGGGCAACAAT...GGCTCCGGATAAAGCATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp ATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCGCGCCGCCCCTATTGTaGCCCAGTCATTGCCATGCT +
Preference number: 5 (lower is better)
Translates to: MVHHLLRSHCGERTLLHPAPPLL*PSHCHA
Trigger: AGCATGGCAATGACTGGGCAACAATAGGGGCGGCGC...GGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp GTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCAGAACTACAACCAGGCTaGAGAGGAGACAGTGCCATG +
Preference number: 5 (lower is better)
Translates to: VPTRSATAAQDTPCVTMSELQPG*RGDSAM
Trigger: CATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTC...TGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp AGACACACCCTGTGTGACTATGTCACCTGGCTCAGTGCTTGTCAACTCATGAACCTAGCGCCGCCCCTATaGTTGCCCAGTCATTGCCAT +
Preference number: 5 (lower is better)
Translates to: RHTLCDYVTWLSACQLMNLAPPL*LPSHCH
Trigger: ATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAG...GTTCATGAGTTGACAAGCACTGAGCCAGGTGACATAGTCACACAGGGTGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp ACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCACCAGTCGGCACCGATCTTaGACAGAAGATGCACTTCTT +
Preference number: 5 (lower is better)
Translates to: TDSFSHSCPRHTLCDYVTSRHRS*TEDALL
Trigger: AAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACT...GGTGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS TCA 90 bp GCTGAGGTGGGAGAATCACTTGAGCCGACAGGTTTAAGGTTACAGTaGGCTATGATCACACCACTGCATGTCGGCCTGGACAACCAAGCT +
Preference number: 5 (lower is better)
Translates to: AEVGESLEPTGLRLQ*AMITPLHVGLDNQA
Trigger: AGCTTGGTTGTCCAGGCCGACATGCAGTGGTGTGATCATAGCTCACTGTAACCTTAAACCTGTCGGCTCAAGTGATTCTCCCACCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480982.5
CDS-3UTR CAA 90 bp GATGGCTGTATTATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTGCGCCGCCCCTATTGTaGCCCAGTCATTGCCATGCT +
Preference number: 5 (lower is better)
Translates to: DGCIIFQAGNSYLNMLHTAPPLL*PSHCHA
Trigger: AGCATGGCAATGACTGGGCAACAATAGGGGCGGCGC...AGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGATAATACAGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp AGGAGAAGCAGGAGCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTAGTCGGCACCGATCTTaGACAGAAGATGCACTTCTT +
Preference number: 5 (lower is better)
Translates to: RRSRSSSCQGYCGTSSQSSRHRS*TEDALL
Trigger: AAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACT...ACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGCTCCTGCTTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTCACCTGGCTCAGTGCTaGTCAACTCATGAACCACTT +
Preference number: 5 (lower is better)
Translates to: APTASNGLTKCTTTRPPPHLAQC*STHEPL
Trigger: AAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTG...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTTAGGGGAAGGCCTTTGATTTCATCTTCCTaGGTCCATTCAGTACCCCCA +
Preference number: 5 (lower is better)
Translates to: AAAVRVTVGLAVRVRGRPLISSS*VHSVPP
Trigger: TGGGGGTACTGAATGGACCAAGGAAGATGAAATCAA...AGGCCTTCCCCTAACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TTCCTAGCGCCGCCCCTATTGTTGCCCAGTCATTGCCATGCTTTATCCGGAGCCGGTAAATTAAGCCTCTaGGGGGTTGCTCCTATTTCT +
Preference number: 5 (lower is better)
Translates to: FLAPPLLLPSHCHALSGAGKLSL*GVAPIS
Trigger: AGAAATAGGAGCAACCCCCAAGAGGCTTAATTTACC...GGCTCCGGATAAAGCATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp TCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACGGCCCTGGCGGCGGTaGGAACCTGAAGGTTCCATC +
Preference number: 5 (lower is better)
Translates to: SHVTLNRDLCLKLPASTQRPWRR*EPEGSI
Trigger: GATGGAACCTTCAGGTTCCAACCGCCGCCAGGGCCG...TTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394703.9
CDS-3UTR CAA 90 bp GGAGAAGCAGGAGCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTTTCCCATTTGACTGGTTaGGAAGTTGTGGGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: GEAGAAAVRVTVGLAVRVSHLTG*EVVGSN
Trigger: ATTGCTGCCCACAACTTCCAAACCAGTCAAATGGGA...AACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGCTCCTGCTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp GGTGATGAATTTCATCTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGCAACACTTTCCTGTTTaGGGTCCGGGCACTTTGGAA +
Preference number: 5 (lower is better)
Translates to: GDEFHLGKCLLLGRLEAQQHFPV*GPGTLE
Trigger: TTCCAAAGTGCCCGGACCCAAAACAGGAAAGTGTTG...CTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAATTCATCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCATTGTTGCCCAGTCATaGCCATGCTTTATCCGGAGC +
Preference number: 5 (lower is better)
Translates to: ISSHCQQWVNQMYHHKTTIVAQS*PCFIRS
Trigger: GCTCCGGATAAAGCATGGCAATGACTGGGCAACAAT...GGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCCACCTGGCTCAGTGCTaGTCAACTCATGAACCACTT +
Preference number: 5 (lower is better)
Translates to: ISSHCQQWVNQMYHHKTTHLAQC*STHEPL
Trigger: AAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTG...GGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCAGACTGTCAGTTCTGCTaGGGATATGGAAGAAGTGAT +
Preference number: 5 (lower is better)
Translates to: VPTRSATAAQDTPCVTMSDCQFC*GYGRSD
Trigger: ATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC...TGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS TCA 90 bp TGGTCTGGTCTCAGCTATTTGTTTCAGGGCACCAAGACAGTTGTATaGGCCACTGTTTCCAGTGCAGTAACCCACAACACCCAATCACCC +
Preference number: 5 (lower is better)
Translates to: WSGLSYLFQGTKTVV*ATVSSAVTHNTQSP
Trigger: GGGTGATTGGGTGTTGTGGGTTACTGCACTGGAAACAGTGGCTCATACAACTGTCTTGGTGCCCTGAAACAAATAGCTGAGACCAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488352.2
CDS TCA 90 bp TTCTTCCTGACTGCCACAGGATCACTGCCTGCCCATTTCTGCCAGTaGCAACACTTTGTGAGGTGTGAGGTTGGGGGTTTGAGCTTAATT +
Preference number: 5 (lower is better)
Translates to: FFLTATGSLPAHFCQ*QHFVRCEVGGLSLI
Trigger: AATTAAGCTCAAACCCCCAACCTCACACCTCACAAAGTGTTGTCACTGGCAGAAATGGGCAGGCAGTGATCCTGTGGCAGTCAGGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580010.1
CDS GCA 90 bp GAGTTAGGGGAAGGCCTTGGCTTGAGCTTGTTTGAAGTAGGTAGGTaGCTGGAGTGCCAGTGGGCTGTAGATGGAAAGACTAAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: ELGEGLGLSLFEVGR*LECQWAVDGKTKGK
Trigger: TTTTCCTTTAGTCTTTCCATCTACAGCCCACTGGCACTCCAGGCACCTACCTACTTCAAACAAGCTCAAGCCAAGGCCTTCCCCTAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488352.2
CDS-3UTR CAA 90 bp GAAGAAACATGGGTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAATCCCACAGAATCAAGTaGCCTTCCCTTAGCAACCAG +
Preference number: 5 (lower is better)
Translates to: EETWVIWTGICNAAMGLESHRIK*PSLSNQ
Trigger: CTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGGA...TTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCACCCATGTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTTCCCACAGAATCAAGTaGCCTTCCCTTAGCAACCAG +
Preference number: 5 (lower is better)
Translates to: WSTIYFVAIVVNGHYSIPSHRIK*PSLSNQ
Trigger: CTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGGA...AGGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp TTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGCGCCGCCCCTATTGTaGCCCAGTCATTGCCATGCT +
Preference number: 5 (lower is better)
Translates to: LTKCTTTRPPPRSLYLYAAPPLL*PSHCHA
Trigger: AGCATGGCAATGACTGGGCAACAATAGGGGCGGCGC...AGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAGAAGCGCCGCCCCTATTGTaGCCCAGTCATTGCCATGCT +
Preference number: 5 (lower is better)
Translates to: LFSVIVSESTVAGESAEEAPPLL*PSHCHA
Trigger: AGCATGGCAATGACTGGGCAACAATAGGGGCGGCGC...TTCTTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCATGCTGCACACTGGAATaGGTATTACTGTTTGGAACT +
Preference number: 5 (lower is better)
Translates to: VPTRSATAAQDTPCVTMSCCTLE*VLLFGT
Trigger: AGTTCCAAACAGTAATACCAATTCCAGTGTGCAGCA...TGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp GTACCGACTCGTTCAGCCACAGCTGCCCAAGACACACCCTGTGTGACTATGTCATGGGATCTGTTAGTGTaGTCAAAGGCAAGACAGATT +
Preference number: 5 (lower is better)
Translates to: VPTRSATAAQDTPCVTMSWDLLV*SKARQI
Trigger: AATCTGTCTTGCCTTTGACAACACTAACAGATCCCA...TGACATAGTCACACAGGGTGTGTCTTGGGCAGCTGTGGCTGAACGAGTCGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp GACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTGAACTACAACCAGGCTaGAGAGGAGACAGTGCCATG +
Preference number: 5 (lower is better)
Translates to: DCQFCLGYGRSDVLCGNSELQPG*RGDSAM
Trigger: CATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTC...ACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAGATGACTGAATATCACGAACTACAACCAGGCTaGAGAGGAGACAGTGCCATG +
Preference number: 5 (lower is better)
Translates to: CLLLGRLEAQENQMTEYHELQPG*RGDSAM
Trigger: CATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTC...GTGATATTCAGTCATCTGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTATTATCTTCGAACTACAACCAGGCTaGAGAGGAGACAGTGCCATG +
Preference number: 5 (lower is better)
Translates to: DWNLQCCHGARRDGCIIFELQPG*RGDSAM
Trigger: CATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTC...GAAGATAATACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTCCTAGGTCTCTATACTaGTATGCTGGTCAAGTCTCA +
Preference number: 5 (lower is better)
Translates to: APTASNGLTKCTTTRPPPPRSLY*YAGQVS
Trigger: TGAGACTTGACCAGCATACAAGTATAGAGACCTAGG...AGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCCATTTGACTGGTTaGGAAGTTGTGGGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: ISSHCQQWVNQMYHHKTTSHLTG*EVVGSN
Trigger: ATTGCTGCCCACAACTTCCAAACCAGTCAAATGGGA...GGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp ATTTCATCTGGGAAAGTGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCACAACACTTTCCTGTTTaGGGTCCGGGCACTTTGGAA +
Preference number: 5 (lower is better)
Translates to: ISSGKVSASRASGGSGKSQHFPV*GPGTLE
Trigger: TTCCAAAGTGCCCGGACCCAAAACAGGAAAGTGTTG...TGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACACTTTCCCAGATGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTTCCCACAGAATCAAGTaGCCTTCCCTTAGCAACCAG +
Preference number: 5 (lower is better)
Translates to: DCQFCLGYGRSDVLCGNSSHRIK*PSLSNQ
Trigger: CTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGGA...ACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGATCCCACAGAATCAAGTaGCCTTCCCTTAGCAACCAG +
Preference number: 5 (lower is better)
Translates to: PKSAPTASNGLTKCTTTRSHRIK*PSLSNQ
Trigger: CTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGGA...TCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GACTCATCTGAACTACAACCAGGCTTGAGAGGAGACAGTGCCATGTCTGATCTTATTGTTGCCCAGTCATaGCCATGCTTTATCCGGAGC +
Preference number: 5 (lower is better)
Translates to: DSSELQPGLRGDSAMSDLIVAQS*PCFIRS
Trigger: GCTCCGGATAAAGCATGGCAATGACTGGGCAACAAT...AAGATCAGACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTCAGATGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TTAAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGAGCGCCGCCCCTATTGTaGCCCAGTCATTGCCATGCT +
Preference number: 5 (lower is better)
Translates to: LKLPASTQLHTVIKLNLRAPPLL*PSHCHA
Trigger: AGCATGGCAATGACTGGGCAACAATAGGGGCGGCGC...TCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGGCGCCGCCCCTATTGTaGCCCAGTCATTGCCATGCT +
Preference number: 5 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKAPPLL*PSHCHA
Trigger: AGCATGGCAATGACTGGGCAACAATAGGGGCGGCGC...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CAGTCAGAGTTAGGGGAAGGCCTTGGCTTGAGCTTGTTTGAAGTAGGTAGGTGCGGTAAATTAAGCCTCTaGGGGGTTGCTCCTATTTCT +
Preference number: 5 (lower is better)
Translates to: QSELGEGLGLSLFEVGRCGKLSL*GVAPIS
Trigger: AGAAATAGGAGCAACCCCCAAGAGGCTTAATTTACC...GCACCTACCTACTTCAAACAAGCTCAAGCCAAGGCCTTCCCCTAACTCTGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCCCTAGGTCTCTATACTaGTATGCTGGTCAAGTCTCA +
Preference number: 5 (lower is better)
Translates to: ISSHCQQWVNQMYHHKTTPRSLY*YAGQVS
Trigger: TGAGACTTGACCAGCATACAAGTATAGAGACCTAGG...GGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTCCCATTTGACTGGTTaGGAAGTTGTGGGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: MVHHLLRSHCGERTLLHPSHLTG*EVVGSN
Trigger: ATTGCTGCCCACAACTTCCAAACCAGTCAAATGGGA...GGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACCAACACTTTCCTGTTTaGGGTCCGGGCACTTTGGAA +
Preference number: 5 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYQHFPV*GPGTLE
Trigger: TTCCAAAGTGCCCGGACCCAAAACAGGAAAGTGTTG...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331242.12
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCTGCTACTTCTGTGGTaGCAGTCATGGTCACTTCAA +
Preference number: 5 (lower is better)
Translates to: DCQFCLGYGRSDVLCGNSLLLLW*QSWSLQ
Trigger: TTGAAGTGACCATGACTGCAACCACAGAAGTAGCAG...ACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGCGCCGCCCCTATTGTaGCCCAGTCATTGCCATGCT +
Preference number: 5 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSAPPLL*PSHCHA
Trigger: AGCATGGCAATGACTGGGCAACAATAGGGGCGGCGC...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCTAGCGCCGCCCCTATaGTTGCCCAGTCATTGCCAT +
Preference number: 5 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTLAPPL*LPSHCH
Trigger: ATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAG...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTCTAGCGCCGCCCCTATaGTTGCCCAGTCATTGCCAT +
Preference number: 5 (lower is better)
Translates to: GQVSNLVFLKIRRSLVSSLAPPL*LPSHCH
Trigger: ATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAG...AGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCAGTTAATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGCTAGCGCCGCCCCTATaGTTGCCCAGTCATTGCCAT +
Preference number: 5 (lower is better)
Translates to: PVNVIFISYIKFCYPEDELAPPL*LPSHCH
Trigger: ATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAG...CTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATTAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp TTGGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCTCCAAAAGCGTTGGGCTAGCGCCGCCCCTATaGTTGCCCAGTCATTGCCAT +
Preference number: 5 (lower is better)
Translates to: LVLLFGTPDPDLFSKSVGLAPPL*LPSHCH
Trigger: ATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAG...CCCAACGCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp ACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAGTCGGCACCGATCTTaGACAGAAGATGCACTTCTT +
Preference number: 5 (lower is better)
Translates to: TTTRPPPRSLYLYAGQVSSRHRS*TEDALL
Trigger: AAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACT...TGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTAGTCGGCACCGATCTTaGACAGAAGATGCACTTCTT +
Preference number: 5 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCSRHRS*TEDALL
Trigger: AAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACT...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CACCTGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCAAGTCTCTTTTCTTCACCTGGCTCAGTGCTaGTCAACTCATGAACCACTT +
Preference number: 5 (lower is better)
Translates to: HLAQCLSTHEPLLQVSFLHLAQC*STHEPL
Trigger: AAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTG...AAGAAAAGAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp ATGCACTTCTTCCTAGCGCCGCCCCTATTGTTGCCCAGTCATTGCCATGCTTTACTTATGGTTTGCAATTaGCCTTTTGATGGTCCACCA +
Preference number: 5 (lower is better)
Translates to: MHFFLAPPLLLPSHCHALLMVCN*PFDGPP
Trigger: TGGTGGACCATCAAAAGGCAAATTGCAAACCATAAG...TAAAGCATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAGGAAGAAGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp AGGAGAAGCAGGAGCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTAATTGGTATTACTGTTaGGAACTCCAGATCCTGATT +
Preference number: 5 (lower is better)
Translates to: RRSRSSSCQGYCGTSSQSNWYYC*ELQILI
Trigger: AATCAGGATCTGGAGTTCCAAACAGTAATACCAATT...ACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGCTCCTGCTTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp GGAGAAGCAGGAGCAGCAGCTGTCAGGGTTACTGTGGGACTAGCAGTCAGAGTTAATTGGTATTACTGTTaGGAACTCCAGATCCTGATT +
Preference number: 5 (lower is better)
Translates to: GEAGAAAVRVTVGLAVRVNWYYC*ELQILI
Trigger: AATCAGGATCTGGAGTTCCAAACAGTAATACCAATT...AACTCTGACTGCTAGTCCCACAGTAACCCTGACAGCTGCTGCTCCTGCTTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp GTGATCTGGACTGGAATCTGCAATGCTGCCATGGGGCTAGAAGAGATGGCTGTAGTGTGCCTTCTTTGCTaGAACTGCCTATTTCTAAGA +
Preference number: 5 (lower is better)
Translates to: VIWTGICNAAMGLEEMAVVCLLC*NCLFLR
Trigger: TCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACAC...TACAGCCATCTCTTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTGGTAAATTAAGCCTCTaGGGGGTTGCTCCTATTTCT +
Preference number: 5 (lower is better)
Translates to: TASNGLTKCTTTRPPPRSGKLSL*GVAPIS
Trigger: AGAAATAGGAGCAACCCCCAAGAGGCTTAATTTACC...AGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CGCCCCTATTGTTGCCCAGTCATTGCCATGCTTTATCCGGAGCCTAAAACAAGAGGTAAATTAAGCCTCTaGGGGGTTGCTCCTATTTCT +
Preference number: 5 (lower is better)
Translates to: RPYCCPVIAMLYPEPKTRGKLSL*GVAPIS
Trigger: AGAAATAGGAGCAACCCCCAAGAGGCTTAATTTACC...TCTTGTTTTAGGCTCCGGATAAAGCATGGCAATGACTGGGCAACAATAGGGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGAACTACAACCAGGCTaGAGAGGAGACAGTGCCATG +
Preference number: 5 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYELQPG*RGDSAM
Trigger: CATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTC...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TCCTTCATCAGTCGGCACCGATCTTTGACAGAAGATGCACTTCTTCCTAGCGCCGTCCACAGTTGTTCCTaGAGCTTCTCAATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SFISRHRSLTEDALLPSAVHSCS*SFSISS
Trigger: TGAAGAAATTGAGAAGCTCAAGGAACAACTGTGGAC...GGCGCTAGGAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACTGATGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412139.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp TCCTTCATCAGTCGGCACCGATCTTTGACAGAAGATGCACTTCTTCCTAGCGCCTCTTCTTCTTCCCATTaGACTGGTTTGGAAGTTGTG +
Preference number: 5 (lower is better)
Translates to: SFISRHRSLTEDALLPSASSSSH*TGLEVV
Trigger: CACAACTTCCAAACCAGTCAAATGGGAAGAAGAAGA...GGCGCTAGGAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACTGATGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp TCCTTCATCAGTCGGCACCGATCTTTGACAGAAGATGCACTTCTTCCTAGCGCCTCTGCCAATCAGCATTaGGTTCAATTGTTTTCTCCC +
Preference number: 5 (lower is better)
Translates to: SFISRHRSLTEDALLPSASANQH*VQLFSP
Trigger: GGGAGAAAACAATTGAACCAAATGCTGATTGGCAGA...GGCGCTAGGAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACTGATGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp ATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCTGCCAATCAGCATTaGGTTCAATTGTTTTCTCCC +
Preference number: 5 (lower is better)
Translates to: ISSHCQQWVNQMYHHKTTSANQH*VQLFSP
Trigger: GGGAGAAAACAATTGAACCAAATGCTGATTGGCAGA...GGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp CATTGTGGTGAACGGACACTACTCCATCCCTCAGCTAACAGATCCCAGTTAATGCTCAAATTTCCTGTTTaGGGTCCGGGCACTTTGGAA +
Preference number: 5 (lower is better)
Translates to: HCGERTLLHPSANRSQLMLKFPV*GPGTLE
Trigger: TTCCAAAGTGCCCGGACCCAAAACAGGAAATTTGAG...CATTAACTGGGATCTGTTAGCTGAGGGATGGAGTAGTGTCCGTTCACCACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547146.6
CDS-3UTR CAA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGTTGGGTCCGGGCACTTaGGAAGAACCAGGATGGAAG +
Preference number: 5 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKLGPGT*EEPGWK
Trigger: CTTCCATCCTGGTTCTTCCAAAGTGCCCGGACCCAA...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TTCAGTACCCCCACTCTGTTTCCAATTCAGGTAGTTGAGCCATTTAGAACGACACAACACTTTCCTGTTTaGGGTCCGGGCACTTTGGAA +
Preference number: 5 (lower is better)
Translates to: FSTPTLFPIQVVEPFRTTQHFPV*GPGTLE
Trigger: TTCCAAAGTGCCCGGACCCAAAACAGGAAAGTGTTG...TGTCGTTCTAAATGGCTCAACTACCTGAATTGGAAACAGAGTGGGGGTACTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp ACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTTTCATGTTACCCAGATaGTTTCTCTCCCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: TASNGLTKCTTTRPPPRSFMLPR*FLSHVP
Trigger: AGGAACATGGGAGAGAAACAATCTGGGTAACATGAA...AGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTATATCAATTTCTTCCTaGGACCACATCCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCISISS*DHIPCF
Trigger: GAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATAT...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAATATCAATTTCTTCCTaGGACCACATCCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: TTTRPPPRSLYLYAGQVSISISS*DHIPCF
Trigger: GAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATAT...TGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAGATGACTGAATATCACATATCAATTTCTTCCTaGGACCACATCCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: CLLLGRLEAQENQMTEYHISISS*DHIPCF
Trigger: GAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATAT...GTGATATTCAGTCATCTGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ATTTGCCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACAATTGTTGCCCAGTCATaGCCATGCTTTATCCGGAGC +
Preference number: 5 (lower is better)
Translates to: ICLLMVHHLLRSHCGERTIVAQS*PCFIRS
Trigger: GCTCCGGATAAAGCATGGCAATGACTGGGCAACAAT...TGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAAGCGCCGCCCCTATTGTaGCCCAGTCATTGCCATGCT +
Preference number: 5 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNEAPPLL*PSHCHA
Trigger: AGCATGGCAATGACTGGGCAACAATAGGGGCGGCGC...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATCTAGCGCCGCCCCTATaGTTGCCCAGTCATTGCCAT +
Preference number: 5 (lower is better)
Translates to: PQQLSFRDSKLFLVAEVNLAPPL*LPSHCH
Trigger: ATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAG...ATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACAGTCGGCACCGATCTTaGACAGAAGATGCACTTCTT +
Preference number: 5 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYSRHRS*TEDALL
Trigger: AAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACT...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCACTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAACACCTGGCTCAGTGCTaGTCAACTCATGAACCACTT +
Preference number: 5 (lower is better)
Translates to: PLFSVIVSESTVAGESAEHLAQC*STHEPL
Trigger: AAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTG...TTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
ENST00000584619.5
CDS-3UTR CAA 90 bp GATGAGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCACACCTGGCTCAGTGCTaGTCAACTCATGAACCACTT +
Preference number: 5 (lower is better)
Translates to: DEIDFIFLGPFSTPTLFPHLAQC*STHEPL
Trigger: AAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTG...TGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp CATTGTGGTGAACGGACACTACTCCATCCCTCAGCTAACAGATCCCAGTTAATGGACTGTCAGTTCTGCTaGGGATATGGAAGAAGTGAT +
Preference number: 5 (lower is better)
Translates to: HCGERTLLHPSANRSQLMDCQFC*GYGRSD
Trigger: ATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC...CATTAACTGGGATCTGTTAGCTGAGGGATGGAGTAGTGTCCGTTCACCACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp CCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAGACTGTCAGTTCTGCTaGGGATATGGAAGAAGTGAT +
Preference number: 5 (lower is better)
Translates to: PPQDHLLGLYTCMLVKSQDCQFC*GYGRSD
Trigger: ATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC...TTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TGTCCACTTCCCTGTGTTGCAAGTATCCTTCATCAGTCGGCACCGATCTTTGACTGGGATCTGTTAGTGTaGTCAAAGGCAAGACAGATT +
Preference number: 5 (lower is better)
Translates to: CPLPCVASILHQSAPIFDWDLLV*SKARQI
Trigger: AATCTGTCTTGCCTTTGACAACACTAACAGATCCCA...GTCAAAGATCGGTGCCGACTGATGAAGGATACTTGCAACACAGGGAAGTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp CCCTGTGTTGCAAGTATCCTTCATCAGTCGGCACCGATCTTTGACAGAAGATGCTGGGATCTGTTAGTGTaGTCAAAGGCAAGACAGATT +
Preference number: 5 (lower is better)
Translates to: PCVASILHQSAPIFDRRCWDLLV*SKARQI
Trigger: AATCTGTCTTGCCTTTGACAACACTAACAGATCCCA...GCATCTTCTGTCAAAGATCGGTGCCGACTGATGAAGGATACTTGCAACACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp TCCTTCATCAGTCGGCACCGATCTTTGACAGAAGATGCACTTCTTCCTAGCGCCAATCTTCGACATCCTTaGAATCTTCTGAAACAGGAC +
Preference number: 5 (lower is better)
Translates to: SFISRHRSLTEDALLPSANLRHP*NLLKQD
Trigger: GTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATT...GGCGCTAGGAAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACTGATGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp TCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAAGAACTACAACCAGGCTaGAGAGGAGACAGTGCCATG +
Preference number: 5 (lower is better)
Translates to: SHVTLNRDLCLKLPASTQELQPG*RGDSAM
Trigger: CATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTC...TTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGAACTACAACCAGGCTaGAGAGGAGACAGTGCCATG +
Preference number: 5 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLELQPG*RGDSAM
Trigger: CATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTC...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTCCTAGGTCTCTATACTaGTATGCTGGTCAAGTCTCA +
Preference number: 5 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCPRSLY*YAGQVS
Trigger: TGAGACTTGACCAGCATACAAGTATAGAGACCTAGG...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTCAGGTCCACAGTTGTTCCTaGAGCTTCTCAATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: STIYFVAIVVNGHYSIPQVHSCS*SFSISS
Trigger: TGAAGAAATTGAGAAGCTCAAGGAACAACTGTGGAC...CTGAGGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412139.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp CCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAATTTTGGGGTCCACAGTaGTTCCTTGAGCTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: PPQDHLLGLYTCMLVKSQFWGPQ*FLELLN
Trigger: ATTGAGAAGCTCAAGGAACAACTGTGGACCCCAAAA...TTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412139.6
ENST00000579677.5
CDS-3UTR CAA 90 bp TGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTTCTTCTTCTTCCCATTaGACTGGTTTGGAAGTTGTG +
Preference number: 5 (lower is better)
Translates to: WSTIYFVAIVVNGHYSIPSSSSH*TGLEVV
Trigger: CACAACTTCCAAACCAGTCAAATGGGAAGAAGAAGA...AGGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp CGCCCCTATTGTTGCCCAGTCATTGCCATGCTTTATCCGGAGCCTAAAACAAGATCTGCCAATCAGCATTaGGTTCAATTGTTTTCTCCC +
Preference number: 5 (lower is better)
Translates to: RPYCCPVIAMLYPEPKTRSANQH*VQLFSP
Trigger: GGGAGAAAACAATTGAACCAAATGCTGATTGGCAGA...TCTTGTTTTAGGCTCCGGATAAAGCATGGCAATGACTGGGCAACAATAGGGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS TCA 90 bp TGCACACAGGGAACGAAACATCCTTATGGTTTGCAATTTGCCTTTTaGTGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACAC +
Preference number: 5 (lower is better)
Translates to: CTQGTKHPYGLQFAF*WSTIYFVAIVVNGH
Trigger: GTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCCCTGTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579850.5
CDS GCA 90 bp TTTGTTTCAGGGCACCAAGACAGTTGTATGAGCCACTGTTTCCAGTaGAGTAACCCACAACACCCAATCACCCCTCTTTTTCTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: FVSGHQDSCMSHCFQ*SNPQHPITPLFLSL
Trigger: CAAAGAAAGAAAAAGAGGGGTGATTGGGTGTTGTGGGTTACTGCACTGGAAACAGTGGCTCATACAACTGTCTTGGTGCCCTGAAACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488352.2
CDS CCA 90 bp GAAGGTTTAAGAGGCTGCTCTTTGCTCCTGTGTATTTCTATGGTCTaGTCTCAGCTATTTGTTTCAGGGCACCAAGACAGTTGTATGAGC +
Preference number: 5 (lower is better)
Translates to: EGLRGCSLLLCISMV*SQLFVSGHQDSCMS
Trigger: GCTCATACAACTGTCTTGGTGCCCTGAAACAAATAGCTGAGACCAGACCATAGAAATACACAGGAGCAAAGAGCAGCCTCTTAAACCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488352.2
CDS-3UTR CAA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTTTCATGTTACCCAGATaGTTTCTCTCCCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCFMLPR*FLSHVP
Trigger: AGGAACATGGGAGAGAAACAATCTGGGTAACATGAA...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGATTCATGTTACCCAGATaGTTTCTCTCCCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: PKSAPTASNGLTKCTTTRFMLPR*FLSHVP
Trigger: AGGAACATGGGAGAGAAACAATCTGGGTAACATGAA...TCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCTTCATGTTACCCAGATaGTTTCTCTCCCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: PNVPPQDHLLGLYTCMLVFMLPR*FLSHVP
Trigger: AGGAACATGGGAGAGAAACAATCTGGGTAACATGAA...GACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAATCCCACAGAATCAAGTaGCCTTCCCTTAGCAACCAG +
Preference number: 5 (lower is better)
Translates to: SHVTLNRDLCLKLPASTQSHRIK*PSLSNQ
Trigger: CTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGGA...TTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGTCCCACAGAATCAAGTaGCCTTCCCTTAGCAACCAG +
Preference number: 5 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMSHRIK*PSLSNQ
Trigger: CTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGGA...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TTCAGTACCCCCACTCTGTTTCCAATTCAGGTAGTTGAGCCATTTAGAACGACACTGCTACTTCTGTGGTaGCAGTCATGGTCACTTCAA +
Preference number: 5 (lower is better)
Translates to: FSTPTLFPIQVVEPFRTTLLLLW*QSWSLQ
Trigger: TTGAAGTGACCATGACTGCAACCACAGAAGTAGCAG...TGTCGTTCTAAATGGCTCAACTACCTGAATTGGAAACAGAGTGGGGGTACTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp CCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAATTTATCCGGAGCTCCTaGAGCTTCTCAATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: PPQDHLLGLYTCMLVKSQFIRSS*SFSISS
Trigger: TGAAGAAATTGAGAAGCTCAAGGAGCTCCGGATAAA...TTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000547146.6
ENST00000579850.5
CDS-3UTR CAA 90 bp TTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTATTGTTGCCCAGTCATaGCCATGCTTTATCCGGAGC +
Preference number: 5 (lower is better)
Translates to: LTKCTTTRPPPRSLYLYAIVAQS*PCFIRS
Trigger: GCTCCGGATAAAGCATGGCAATGACTGGGCAACAAT...AGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGATTGTTGCCCAGTCATaGCCATGCTTTATCCGGAGC +
Preference number: 5 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMIVAQS*PCFIRS
Trigger: GCTCCGGATAAAGCATGGCAATGACTGGGCAACAAT...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCTGAATGATAGTCGGCACCGATCTTaGACAGAAGATGCACTTCTT +
Preference number: 5 (lower is better)
Translates to: FCLGYGRSDVLCGNSLNDSRHRS*TEDALL
Trigger: AAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACT...ATCATTCAGACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTAGTCGGCACCGATCTTaGACAGAAGATGCACTTCTT +
Preference number: 5 (lower is better)
Translates to: PLGGCSYFFEEVVINSVPSRHRS*TEDALL
Trigger: AAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACT...AGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCTTATGGTTTGCAATTaGCCTTTTGATGGTCCACCA +
Preference number: 5 (lower is better)
Translates to: DCQFCLGYGRSDVLCGNSLMVCN*PFDGPP
Trigger: TGGTGGACCATCAAAAGGCAAATTGCAAACCATAAG...ACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ATGCACTTCTTCCTAGCGCCGCCCCTATTGTTGCCCAGTCATTGCCATGCTTTAAATTGGTATTACTGTTaGGAACTCCAGATCCTGATT +
Preference number: 5 (lower is better)
Translates to: MHFFLAPPLLLPSHCHALNWYYC*ELQILI
Trigger: AATCAGGATCTGGAGTTCCAAACAGTAATACCAATT...TAAAGCATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAGGAAGAAGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp ACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCTGGGATCTGTTAGTGTaGTCAAAGGCAAGACAGATT +
Preference number: 5 (lower is better)
Translates to: TVSSAWDMEEVMSSVATVWDLLV*SKARQI
Trigger: AATCTGTCTTGCCTTTGACAACACTAACAGATCCCA...GACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCGTGTGCCTTCTTTGCTaGAACTGCCTATTTCTAAGA +
Preference number: 5 (lower is better)
Translates to: PNVPPQDHLLGLYTCMLVVCLLC*NCLFLR
Trigger: TCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACAC...GACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GACTCATCTGAACTACAACCAGGCTTGAGAGGAGACAGTGCCATGTCTGATCTTGTGTGCCTTCTTTGCTaGAACTGCCTATTTCTAAGA +
Preference number: 5 (lower is better)
Translates to: DSSELQPGLRGDSAMSDLVCLLC*NCLFLR
Trigger: TCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACAC...AAGATCAGACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTCAGATGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGAGTGTGCCTTCTTTGCTaGAACTGCCTATTTCTAAGA +
Preference number: 5 (lower is better)
Translates to: PKSAPTASNGLTKCTTTRVCLLC*NCLFLR
Trigger: TCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACAC...TCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAACAGTGTGCCTTCTTaGCTTGAACTGCCTATTTCT +
Preference number: 5 (lower is better)
Translates to: PNVPPQDHLLGLYTCMLVNSVPS*LELPIS
Trigger: AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTT...GACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACGGTAAATTAAGCCTCTaGGGGGTTGCTCCTATTTCT +
Preference number: 5 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNGKLSL*GVAPIS
Trigger: AGAAATAGGAGCAACCCCCAAGAGGCTTAATTTACC...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTGAACTACAACCAGGCTaGAGAGGAGACAGTGCCATG +
Preference number: 5 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTELQPG*RGDSAM
Trigger: CATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTC...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCAAACTTAGTCTTCTaGAAGATCAGAAGATCACTG +
Preference number: 5 (lower is better)
Translates to: ISSHCQQWVNQMYHHKTTSNLVF*KIRRSL
Trigger: CAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGA...GGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GCACTGGCTAAATCAGAGGGTGATTCCTCTTGTTTAAGGTCGGTGTCAGAGATTCCTAGGTCTCTATACTaGTATGCTGGTCAAGTCTCA +
Preference number: 5 (lower is better)
Translates to: ALAKSEGDSSCLRSVSEIPRSLY*YAGQVS
Trigger: TGAGACTTGACCAGCATACAAGTATAGAGACCTAGG...AATCTCTGACACCGACCTTAAACAAGAGGAATCACCCTCTGATTTAGCCAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTACCACCACAAGACCACCAAACTGAATATACAATaGTTCCCTAGGCAACCAACT +
Preference number: 5 (lower is better)
Translates to: ISSHCQQWVNQMYHHKTTKLNIQ*FPRQPT
Trigger: AGTTGGTTGCCTAGGGAACAATTGTATATTCAGTTT...GGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCAACAGTCTGAATGATTCCCATTTGACTGGTTaGGAAGTTGTGGGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: FCLGYGRSDVLCGNSLNDSHLTG*EVVGSN
Trigger: ATTGCTGCCCACAACTTCCAAACCAGTCAAATGGGA...ATCATTCAGACTGTTGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp TTCAGTACCCCCACTCTGTTTCCAATTCAGGTAGTTGAGCCATTTAGAACGACATCCCATTTGACTGGTTaGGAAGTTGTGGGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: FSTPTLFPIQVVEPFRTTSHLTG*EVVGSN
Trigger: ATTGCTGCCCACAACTTCCAAACCAGTCAAATGGGA...TGTCGTTCTAAATGGCTCAACTACCTGAATTGGAAACAGAGTGGGGGTACTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp CATTGTGGTGAACGGACACTACTCCATCCCTCAGCTAACAGATCCCAGTTAATGTCTTCTTCTTCCCATTaGACTGGTTTGGAAGTTGTG +
Preference number: 5 (lower is better)
Translates to: HCGERTLLHPSANRSQLMSSSSH*TGLEVV
Trigger: CACAACTTCCAAACCAGTCAAATGGGAAGAAGAAGA...CATTAACTGGGATCTGTTAGCTGAGGGATGGAGTAGTGTCCGTTCACCACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS TCA 90 bp ATAGAGAGGACTTCAGTCTCCACGCCTTCAATCTGGTACTTTGCATaGGCACTAAACCCACTGAGGATGAGATTGATTTCATCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: IERTSVSTPSIWYFA*ALNPLRMRLISSSL
Trigger: CAAGGAAGATGAAATCAATCTCATCCTCAGTGGGTTTAGTGCTCATGCAAAGTACCAGATTGAAGGCGTGGAGACTGAAGTCCTCTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547146.6
CDS TCA 90 bp CATTACCAGGGAACGAAACATCCTTATGGTTTGCAATTTGCCTTTTaGTGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACAC +
Preference number: 5 (lower is better)
Translates to: HYQGTKHPYGLQFAF*WSTIYFVAIVVNGH
Trigger: GTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCCCTGGTAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578926.1
ENST00000582887.1
CDS GCA 90 bp CACATGGTTTCTGTCATCATACATGCGAAGCACTCTTCTATAAACTaGAAACAAAGGCCGGTTCAGACCCCATGCTATAGTCCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: HMVSVIIHAKHSSIN*KQRPVQTPCYSPVE
Trigger: TTCTACAGGACTATAGCATGGGGTCTGAACCGGCCTTTGTTTGCAGTTTATAGAAGAGTGCTTCGCATGTATGATGACAGAAACCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000432937.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
ENST00000584619.5
CDS GCA 90 bp GGATATAGAGAGGACTTCAGTCTCCACGCCTTCAATCTGGTACTTTaGATGAGCACTAAACCCACTGAGGATGAGATTGATTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: GYREDFSLHAFNLVL*MSTKPTEDEIDFIF
Trigger: GAAGATGAAATCAATCTCATCCTCAGTGGGTTTAGTGCTCATGCAAAGTACCAGATTGAAGGCGTGGAGACTGAAGTCCTCTCTATATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547146.6
CDS-3UTR CAA 90 bp TTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTTGGGTCCGGGCACTTaGGAAGAACCAGGATGGAAG +
Preference number: 5 (lower is better)
Translates to: FFEEVVINSVPSLLELPILGPGT*EEPGWK
Trigger: CTTCCATCCTGGTTCTTCCAAAGTGCCCGGACCCAA...AATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp AATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGATTTGGGTCCGGGCACTTaGGAAGAACCAGGATGGAAG +
Preference number: 5 (lower is better)
Translates to: NVIFISYIKFCYPEDEIDLGPGT*EEPGWK
Trigger: CTTCCATCCTGGTTCTTCCAAAGTGCCCGGACCCAA...ATCAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCAACACTTTCCTGTTTaGGGTCCGGGCACTTTGGAA +
Preference number: 5 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLQHFPV*GPGTLE
Trigger: TTCCAAAGTGCCCGGACCCAAAACAGGAAAGTGTTG...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331242.12
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTCCCACAGAATCAAGTaGCCTTCCCTTAGCAACCAG +
Preference number: 5 (lower is better)
Translates to: WSSLKLSLLEDQKITGKLSHRIK*PSLSNQ
Trigger: CTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGGA...GAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTTCCCACAGAATCAAGTaGCCTTCCCTTAGCAACCAG +
Preference number: 5 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTSHRIK*PSLSNQ
Trigger: CTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGGA...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TGTCAAAGGCAAGACAGATTCAGTATCTATAACATCAGATGCCTGGATAAAGCCTCCCACAGAATCAAGTaGCCTTCCCTTAGCAACCAG +
Preference number: 5 (lower is better)
Translates to: CQRQDRFSIYNIRCLDKASHRIK*PSLSNQ
Trigger: CTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGGA...GGCTTTATCCAGGCATCTGATGTTATAGATACTGAATCTGTCTTGCCTTTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCACTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAATATCAATTTCTTCCTaGGACCACATCCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: PLFSVIVSESTVAGESAEISISS*DHIPCF
Trigger: GAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATAT...TTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
ENST00000584619.5
CDS-3UTR CAA 90 bp ATTTGCCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACAATATCAATTTCTTCCTaGGACCACATCCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: ICLLMVHHLLRSHCGERTISISS*DHIPCF
Trigger: GAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATAT...TGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp TTAAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGAATTGTTGCCCAGTCATaGCCATGCTTTATCCGGAGC +
Preference number: 5 (lower is better)
Translates to: LKLPASTQLHTVIKLNLRIVAQS*PCFIRS
Trigger: GCTCCGGATAAAGCATGGCAATGACTGGGCAACAAT...TCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCAGTTAATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGTTGCCCAGTCATaGCCATGCTTTATCCGGAGC +
Preference number: 5 (lower is better)
Translates to: PVNVIFISYIKFCYPEDEIVAQS*PCFIRS
Trigger: GCTCCGGATAAAGCATGGCAATGACTGGGCAACAAT...CTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATTAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp GGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTCACCTGGCTCAGTGCTaGTCAACTCATGAACCACTT +
Preference number: 5 (lower is better)
Translates to: GQVSNLVFLKIRRSLVSSHLAQC*STHEPL
Trigger: AAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTG...AGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ATTATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTGGAATTGGTTTGATTTCATCTTCCTaGGTCCATTCAGTACCCCCA +
Preference number: 5 (lower is better)
Translates to: IIFQAGNSYLNMLHTGIGLISSS*VHSVPP
Trigger: TGGGGGTACTGAATGGACCAAGGAAGATGAAATCAA...ACCAATTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp CTGTGTGACTATGTCACCTGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCTTTGCAATTTGCCTTTaGATGGTCCACCATTTACTT +
Preference number: 5 (lower is better)
Translates to: LCDYVTWLSACQLMNHFCFAICL*MVHHLL
Trigger: AAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAA...GCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTGACATAGTCACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp TCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACACTACTCCATCCCTCAGTTTGCAATTTGCCTTTaGATGGTCCACCATTTACTT +
Preference number: 5 (lower is better)
Translates to: STIYFVAIVVNGHYSIPQFAICL*MVHHLL
Trigger: AAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAA...CTGAGGGATGGAGTAGTGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACCTTATGGTTTGCAATTaGCCTTTTGATGGTCCACCA +
Preference number: 5 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYLMVCN*PFDGPP
Trigger: TGGTGGACCATCAAAAGGCAAATTGCAAACCATAAG...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTGGGATCTGTTAGTGTaGTCAAAGGCAAGACAGATT +
Preference number: 5 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYWDLLV*SKARQI
Trigger: AATCTGTCTTGCCTTTGACAACACTAACAGATCCCA...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GATGGCTGTATTATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTGTGTGCCTTCTTTGCTaGAACTGCCTATTTCTAAGA +
Preference number: 5 (lower is better)
Translates to: DGCIIFQAGNSYLNMLHTVCLLC*NCLFLR
Trigger: TCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACAC...AGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGATAATACAGCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACAACAGTGTGCCTTCTTaGCTTGAACTGCCTATTTCT +
Preference number: 5 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNNSVPS*LELPIS
Trigger: AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTT...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACAACAGTGTGCCTTCTTaGCTTGAACTGCCTATTTCT +
Preference number: 5 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYNSVPS*LELPIS
Trigger: AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTT...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCAAGTCTCTTTTCTTCTTCCCTAGGTCTCTATACTaGTATGCTGGTCAAGTCTCA +
Preference number: 5 (lower is better)
Translates to: WLSACQLMNHFCKSLFFFPRSLY*YAGQVS
Trigger: TGAGACTTGACCAGCATACAAGTATAGAGACCTAGG...GAAGAAGAAAAGAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp CCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTCCTAGGTCTCTATACTaGTATGCTGGTCAAGTCTCA +
Preference number: 5 (lower is better)
Translates to: PLGGCSYFFEEVVINSVPPRSLY*YAGQVS
Trigger: TGAGACTTGACCAGCATACAAGTATAGAGACCTAGG...AGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACAATCAGGCTGGTTTTaGTGCTTTCTACTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SHVTLNRDLCLKLPASTQQSGWF*CFLLCS
Trigger: GCTGCAGAGTAGAAAGCACAAAAACCAGCCTGATTG...TTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394703.9
CDS-3UTR CAA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTCTTCTTCTTCCCATTaGACTGGTTTGGAAGTTGTG +
Preference number: 5 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNSSSSH*TGLEVV
Trigger: CACAACTTCCAAACCAGTCAAATGGGAAGAAGAAGA...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS GCA 90 bp AACATGCTGCACACAGGGAACGAAACATCCTTATGGTTTGCAATTTaGCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAA +
Preference number: 5 (lower is better)
Translates to: NMLHTGNETSLWFAI*LLMVHHLLRSHCGE
Trigger: TTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCCCTGTGTGCAGCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579850.5
CDS-3UTR CAA 90 bp ATCTTCCAAGCGGGCAACTCTTATCTGAACATGCTGCACACTGGAATTGGTATTTTCATGTTACCCAGATaGTTTCTCTCCCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: IFQAGNSYLNMLHTGIGIFMLPR*FLSHVP
Trigger: AGGAACATGGGAGAGAAACAATCTGGGTAACATGAA...AATACCAATTCCAGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCTGCTACTTCTGTGGTaGCAGTCATGGTCACTTCAA +
Preference number: 5 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLLLLLW*QSWSLQ
Trigger: TTGAAGTGACCATGACTGCAACCACAGAAGTAGCAG...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCTGCTACTTCTGTGGTaGCAGTCATGGTCACTTCAA +
Preference number: 5 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTLLLLW*QSWSLQ
Trigger: TTGAAGTGACCATGACTGCAACCACAGAAGTAGCAG...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ACATCAAGTTCTGCTATCCTGAGGATGAGATTGATTTCATCTTCCTTGGTCCATCTGCTACTTCTGTGGTaGCAGTCATGGTCACTTCAA +
Preference number: 5 (lower is better)
Translates to: TSSSAILRMRLISSSLVHLLLLW*QSWSLQ
Trigger: TTGAAGTGACCATGACTGCAACCACAGAAGTAGCAG...ATGGACCAAGGAAGATGAAATCAATCTCATCCTCAGGATAGCAGAACTTGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAATATCAATTTCTTCCTaGGACCACATCCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLISISS*DHIPCF
Trigger: GAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATAT...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAAATATCAATTTCTTCCTaGGACCACATCCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SHVTLNRDLCLKLPASTQISISS*DHIPCF
Trigger: GAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATAT...TTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTATTGTTGCCCAGTCATaGCCATGCTTTATCCGGAGC +
Preference number: 5 (lower is better)
Translates to: LVCWSSLKLSLLEDQKITIVAQS*PCFIRS
Trigger: GCTCCGGATAAAGCATGGCAATGACTGGGCAACAAT...AGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTAGACCAAGTCGGCACCGATCTTaGACAGAAGATGCACTTCTT +
Preference number: 5 (lower is better)
Translates to: VSNLVFLKIRRSLVSSRPSRHRS*TEDALL
Trigger: AAGAAGTGCATCTTCTGTCAAAGATCGGTGCCGACT...TGGTCTAGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ACCAAATCTTCGACATCCTTTGAATCTTCTGAAACAGGACTGCCCAAGGATGATTTGATTTCATCTTCCTaGGTCCATTCAGTACCCCCA +
Preference number: 5 (lower is better)
Translates to: TKSSTSFESSETGLPKDDLISSS*VHSVPP
Trigger: TGGGGGTACTGAATGGACCAAGGAAGATGAAATCAA...ATCATCCTTGGGCAGTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TCTGCTGAAGCAGGGAACGAAACATCCTTATGGTTTGCAATTTGCCTTTTGATGTTGATTTCATCTTCCTaGGTCCATTCAGTACCCCCA +
Preference number: 5 (lower is better)
Translates to: SAEAGNETSLWFAICLLMLISSS*VHSVPP
Trigger: TGGGGGTACTGAATGGACCAAGGAAGATGAAATCAA...CATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCCCTGCTTCAGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584619.5
CDS-3UTR CAA 90 bp GACTCATCTGAACTACAACCAGGCTTGAGAGGAGACAGTGCCATGTCTGATCTTTTTGCAATTTGCCTTTaGATGGTCCACCATTTACTT +
Preference number: 5 (lower is better)
Translates to: DSSELQPGLRGDSAMSDLFAICL*MVHHLL
Trigger: AAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAA...AAGATCAGACATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTCAGATGAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAATTTGCAATTTGCCTTTaGATGGTCCACCATTTACTT +
Preference number: 5 (lower is better)
Translates to: PPQDHLLGLYTCMLVKSQFAICL*MVHHLL
Trigger: AAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAA...TTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp AGGATGAGATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCTGCTGCACACTGGAATaGGTATTACTGTTTGGAACT +
Preference number: 5 (lower is better)
Translates to: RMRLISSSLVHSVPPLCFCCTLE*VLLFGT
Trigger: AGTTCCAAACAGTAATACCAATTCCAGTGTGCAGCA...GAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCTCATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp ATTTGCCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACATGCTGCACACTGGAATaGGTATTACTGTTTGGAACT +
Preference number: 5 (lower is better)
Translates to: ICLLMVHHLLRSHCGERTCCTLE*VLLFGT
Trigger: AGTTCCAAACAGTAATACCAATTCCAGTGTGCAGCA...TGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp TCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAAGACTGTCAGTTCTGCTaGGGATATGGAAGAAGTGAT +
Preference number: 5 (lower is better)
Translates to: SHVTLNRDLCLKLPASTQDCQFC*GYGRSD
Trigger: ATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC...TTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACAATCTTCGACATCCTTaGAATCTTCTGAAACAGGAC +
Preference number: 5 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNNLRHP*NLLKQD
Trigger: GTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATT...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACAATCTTCGACATCCTTaGAATCTTCTGAAACAGGAC +
Preference number: 5 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYNLRHP*NLLKQD
Trigger: GTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATT...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TTCAGTACCCCCACTCTGTTTCCAATTCAGGTAGTTGAGCCATTTAGAACGACAGTGTGCCTTCTTTGCTaGAACTGCCTATTTCTAAGA +
Preference number: 5 (lower is better)
Translates to: FSTPTLFPIQVVEPFRTTVCLLC*NCLFLR
Trigger: TCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACAC...TGTCGTTCTAAATGGCTCAACTACCTGAATTGGAAACAGAGTGGGGGTACTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp CCACTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAAACAGTGTGCCTTCTTaGCTTGAACTGCCTATTTCT +
Preference number: 5 (lower is better)
Translates to: PLFSVIVSESTVAGESAENSVPS*LELPIS
Trigger: AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTT...TTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGGTAAATTAAGCCTCTaGGGGGTTGCTCCTATTTCT +
Preference number: 5 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLGKLSL*GVAPIS
Trigger: AGAAATAGGAGCAACCCCCAAGAGGCTTAATTTACC...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ACCAAATCTTCGACATCCTTTGAATCTTCTGAAACAGGACTGCCCAAGGATGATGGTAAATTAAGCCTCTaGGGGGTTGCTCCTATTTCT +
Preference number: 5 (lower is better)
Translates to: TKSSTSFESSETGLPKDDGKLSL*GVAPIS
Trigger: AGAAATAGGAGCAACCCCCAAGAGGCTTAATTTACC...ATCATCCTTGGGCAGTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GAGGGAAGAATCTCAAATGTCTGTAGTGTTCCACTGTTTAGTGTTATTGTTTCTGAACTACAACCAGGCTaGAGAGGAGACAGTGCCATG +
Preference number: 5 (lower is better)
Translates to: EGRISNVCSVPLFSVIVSELQPG*RGDSAM
Trigger: CATGGCACTGTCTCCTCTCAAGCCTGGTTGTAGTTC...AGAAACAATAACACTAAACAGTGGAACACTACAGACATTTGAGATTCTTCCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CTGTTTACCCTGCCTAAATCAGCTCCCACTGCCAGCAATGGGTTAACCAAATGTTCAAACTTAGTCTTCTaGAAGATCAGAAGATCACTG +
Preference number: 5 (lower is better)
Translates to: LFTLPKSAPTASNGLTKCSNLVF*KIRRSL
Trigger: CAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGA...ACATTTGGTTAACCCATTGCTGGCAGTGGGAGCTGATTTAGGCAGGGTAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCTCAAACTTAGTCTTCTaGAAGATCAGAAGATCACTG +
Preference number: 5 (lower is better)
Translates to: PNVPPQDHLLGLYTCMLVSNLVF*KIRRSL
Trigger: CAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGA...GACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CTATCGACTGTCAGTTCTGCTTGGGATATGGAAGAAGTGATGTCCTCTGTGGCATCAAACTTAGTCTTCTaGAAGATCAGAAGATCACTG +
Preference number: 5 (lower is better)
Translates to: LSTVSSAWDMEEVMSSVASNLVF*KIRRSL
Trigger: CAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGA...TGCCACAGAGGACATCACTTCTTCCATATCCCAAGCAGAACTGACAGTCGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TGTCTGCTTCTAGGGCGTCTGGAGGCTCAGGAAAATCAGATGACTGAATATCACAAACTGAATATACAATaGTTCCCTAGGCAACCAACT +
Preference number: 5 (lower is better)
Translates to: CLLLGRLEAQENQMTEYHKLNIQ*FPRQPT
Trigger: AGTTGGTTGCCTAGGGAACAATTGTATATTCAGTTT...GTGATATTCAGTCATCTGATTTTCCTGAGCCTCCAGACGCCCTAGAAGCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TGGCTCAGTGCTTGTCAACTCATGAACCACTTCTGCAAGTCTCTTTTCTTCTTCGTCCACAGTTGTTCCTaGAGCTTCTCAATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: WLSACQLMNHFCKSLFFFVHSCS*SFSISS
Trigger: TGAAGAAATTGAGAAGCTCAAGGAACAACTGTGGAC...GAAGAAGAAAAGAGACTTGCAGAAGTGGTTCATGAGTTGACAAGCACTGAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412139.6
ENST00000579677.5
ENST00000584619.5
CDS CCA 90 bp ACTGTTGGTCTAGAGGTAGCAACTTCTCTTTTCCAAACAGTAATATaGTATTCTTGCGCAGGGAAGCCAATTCTAGACTTTGCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: TVGLEVATSLFQTVI*YSCAGKPILDFALL
Trigger: GAGCAAAGCAAAGTCTAGAATTGGCTTCCCTGCGCAAGAATACCATATTACTGTTTGGAAAAGAGAAGTTGCTACCTCTAGACCAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480982.5
CDS-3UTR CAA 90 bp TTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTCAACACTTTCCTGTTTaGGGTCCGGGCACTTTGGAA +
Preference number: 5 (lower is better)
Translates to: FFEEVVINSVPSLLELPIQHFPV*GPGTLE
Trigger: TTCCAAAGTGCCCGGACCCAAAACAGGAAAGTGTTG...AATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331242.12
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp AATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGATCAACACTTTCCTGTTTaGGGTCCGGGCACTTTGGAA +
Preference number: 5 (lower is better)
Translates to: NVIFISYIKFCYPEDEIDQHFPV*GPGTLE
Trigger: TTCCAAAGTGCCCGGACCCAAAACAGGAAAGTGTTG...ATCAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp CTGGAATTGGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCTCCAAAAGCCTGCTACTTCTGTGGTaGCAGTCATGGTCACTTCAA +
Preference number: 5 (lower is better)
Translates to: LELVLLFGTPDPDLFSKSLLLLW*QSWSLQ
Trigger: TTGAAGTGACCATGACTGCAACCACAGAAGTAGCAG...GCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAATTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTCTGCTACTTCTGTGGTaGCAGTCATGGTCACTTCAA +
Preference number: 5 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSLLLLW*QSWSLQ
Trigger: TTGAAGTGACCATGACTGCAACCACAGAAGTAGCAG...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACTTTTATCCGGAGCTCCTaGAGCTTCTCAATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: PCNTKQGFMLKTPSLHSTFIRSS*SFSISS
Trigger: TGAAGAAATTGAGAAGCTCAAGGAGCTCCGGATAAA...AGTTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000547146.6
ENST00000579850.5
CDS-3UTR CAA 90 bp AATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGATCACCTGGCTCAGTGCTaGTCAACTCATGAACCACTT +
Preference number: 5 (lower is better)
Translates to: NVIFISYIKFCYPEDEIDHLAQC*STHEPL
Trigger: AAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTG...ATCAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp TGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTTGATTTCATCTTCCTaGGTCCATTCAGTACCCCCA +
Preference number: 5 (lower is better)
Translates to: WSSLKLSLLEDQKITGKLLISSS*VHSVPP
Trigger: TGGGGGTACTGAATGGACCAAGGAAGATGAAATCAA...GAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TTGGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCTCCAAAAGCGTTGGGTTGATTTCATCTTCCTaGGTCCATTCAGTACCCCCA +
Preference number: 5 (lower is better)
Translates to: LVLLFGTPDPDLFSKSVGLISSS*VHSVPP
Trigger: TGGGGGTACTGAATGGACCAAGGAAGATGAAATCAA...CCCAACGCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTTGCAATTTGCCTTTaGATGGTCCACCATTTACTT +
Preference number: 5 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNFAICL*MVHHLL
Trigger: AAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAA...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTTGCAATTTGCCTTTaGATGGTCCACCATTTACTT +
Preference number: 5 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYFAICL*MVHHLL
Trigger: AAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAA...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTCTTATGGTTTGCAATTaGCCTTTTGATGGTCCACCA +
Preference number: 5 (lower is better)
Translates to: LTKCTTTRPPPRSLYLYALMVCN*PFDGPP
Trigger: TGGTGGACCATCAAAAGGCAAATTGCAAACCATAAG...AGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTACTTATGGTTTGCAATTaGCCTTTTGATGGTCCACCA +
Preference number: 5 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLLMVCN*PFDGPP
Trigger: TGGTGGACCATCAAAAGGCAAATTGCAAACCATAAG...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACAATTGGTATTACTGTTaGGAACTCCAGATCCTGATT +
Preference number: 5 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYNWYYC*ELQILI
Trigger: AATCAGGATCTGGAGTTCCAAACAGTAATACCAATT...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACAATTGGTATTACTGTTaGGAACTCCAGATCCTGATT +
Preference number: 5 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNNWYYC*ELQILI
Trigger: AATCAGGATCTGGAGTTCCAAACAGTAATACCAATT...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGTGCTGCACACTGGAATaGGTATTACTGTTTGGAACT +
Preference number: 5 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMCCTLE*VLLFGT
Trigger: AGTTCCAAACAGTAATACCAATTCCAGTGTGCAGCA...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp AGTCTGAATGATGACTCTTGGTGTGTGACACTGCACTGTAACATTATCACTTGTGACTGTCAGTTCTGCTaGGGATATGGAAGAAGTGAT +
Preference number: 5 (lower is better)
Translates to: SLNDDSWCVTLHCNIITCDCQFC*GYGRSD
Trigger: ATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC...ACAAGTGATAATGTTACAGTGCAGTGTCACACACCAAGAGTCATCATTCAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TTAAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGAGACTGTCAGTTCTGCTaGGGATATGGAAGAAGTGAT +
Preference number: 5 (lower is better)
Translates to: LKLPASTQLHTVIKLNLRDCQFC*GYGRSD
Trigger: ATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC...TCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TTGGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCTCCAAAAGCGTTGGGGACTGTCAGTTCTGCTaGGGATATGGAAGAAGTGAT +
Preference number: 5 (lower is better)
Translates to: LVLLFGTPDPDLFSKSVGDCQFC*GYGRSD
Trigger: ATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC...CCCAACGCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAAACAGTGTGCCTTCTTaGCTTGAACTGCCTATTTCT +
Preference number: 5 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLNSVPS*LELPIS
Trigger: AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTT...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCGGTAAATTAAGCCTCTaGGGGGTTGCTCCTATTTCT +
Preference number: 5 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLGKLSL*GVAPIS
Trigger: AGAAATAGGAGCAACCCCCAAGAGGCTTAATTTACC...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCGGTAAATTAAGCCTCTaGGGGGTTGCTCCTATTTCT +
Preference number: 5 (lower is better)
Translates to: WSSLKLSLLEDQKITGKLGKLSL*GVAPIS
Trigger: AGAAATAGGAGCAACCCCCAAGAGGCTTAATTTACC...GAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTCCTAGGTCTCTATACTaGTATGCTGGTCAAGTCTCA +
Preference number: 5 (lower is better)
Translates to: GQVSNLVFLKIRRSLVSSPRSLY*YAGQVS
Trigger: TGAGACTTGACCAGCATACAAGTATAGAGACCTAGG...AGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGCCTAGGTCTCTATACTaGTATGCTGGTCAAGTCTCA +
Preference number: 5 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKPRSLY*YAGQVS
Trigger: TGAGACTTGACCAGCATACAAGTATAGAGACCTAGG...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp AGCAATGGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACAAACTGAATATACAATaGTTCCCTAGGCAACCAACT +
Preference number: 5 (lower is better)
Translates to: SNGLTKCTTTRPPPRSLYKLNIQ*FPRQPT
Trigger: AGTTGGTTGCCTAGGGAACAATTGTATATTCAGTTT...GTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCCATTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ACCACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACAAACTGAATATACAATaGTTCCCTAGGCAACCAACT +
Preference number: 5 (lower is better)
Translates to: TTRPPPRSLYLYAGQVSNKLNIQ*FPRQPT
Trigger: AGTTGGTTGCCTAGGGAACAATTGTATATTCAGTTT...GTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CTGTTTAGTGTTATTGTTTCTGAGTCAACGGTAGCAGGAGAGTCTGCTGAAGAATCTGCCAATCAGCATTaGGTTCAATTGTTTTCTCCC +
Preference number: 5 (lower is better)
Translates to: LFSVIVSESTVAGESAEESANQH*VQLFSP
Trigger: GGGAGAAAACAATTGAACCAAATGCTGATTGGCAGA...TTCTTCAGCAGACTCTCCTGCTACCGTTGACTCAGAAACAATAACACTAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp ATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCAATTCAGTCTGCCAATCAGCATTaGGTTCAATTGTTTTCTCCC +
Preference number: 5 (lower is better)
Translates to: IDFIFLGPFSTPTLFPIQSANQH*VQLFSP
Trigger: GGGAGAAAACAATTGAACCAAATGCTGATTGGCAGA...CTGAATTGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS TCA 90 bp GGAAGTGCAACAACTGATATGCAAGGAGTAGAATCATCAATACTCTaGTCATCCTCAGAGGACAAACAAAGCCTTTTATGTGGAGGTTCA +
Preference number: 5 (lower is better)
Translates to: GSATTDMQGVESSIL*SSSEDKQSLLCGGS
Trigger: TGAACCTCCACATAAAAGGCTTTGTTTGTCCTCTGAGGATGATCAGAGTATTGATGATTCTACTCCTTGCATATCAGTTGTTGCACTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000420131.5
ENST00000425705.2
ENST00000430405.7
ENST00000432937.6
ENST00000434534.5
ENST00000446796.6
ENST00000447863.5
ENST00000449088.7
ENST00000453049.5
ENST00000547146.6
ENST00000579677.5
ENST00000584619.5
CDS TCA 90 bp CATCCTTTGAATCTTCTGAAACAGGACTGCCCAAGGATGATCCAATaGTATTTGATTCTTCCTGATGATGTTGGAGTATGGGATCTCAGT +
Preference number: 5 (lower is better)
Translates to: HPLNLLKQDCPRMIQ*YLILPDDVGVWDLS
Trigger: ACTGAGATCCCATACTCCAACATCATCAGGAAGAATCAAATATCATTGGATCATCCTTGGGCAGTCCTGTTTCAGAAGATTCAAAGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454008.6
CDS TCA 90 bp ACAGAAGAAACAATGCTGTTACAGTGTAGGATGATGTTCCTAGGCTaGACCACAAAGATTACTAACCACTCAGGAAAATGCTTCTATGGG +
Preference number: 5 (lower is better)
Translates to: TEETMLLQCRMMFLG*TTKITNHSGKCFYG
Trigger: CCCATAGAAGCATTTTCCTGAGTGGTTAGTAATCTTTGTGGTTCAGCCTAGGAACATCATCCTACACTGTAACAGCATTGTTTCTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580010.1
CDS-3UTR CAA 90 bp ACATCAAGTTCTGCTATCCTGAGGATGAGATTGATTTCATCTTCCTTGGTCCATTTCATGTTACCCAGATaGTTTCTCTCCCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: TSSSAILRMRLISSSLVHFMLPR*FLSHVP
Trigger: AGGAACATGGGAGAGAAACAATCTGGGTAACATGAA...ATGGACCAAGGAAGATGAAATCAATCTCATCCTCAGGATAGCAGAACTTGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp CTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTATATCAATTTCTTCCTaGGACCACATCCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: LVCWSSLKLSLLEDQKITISISS*DHIPCF
Trigger: GAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATAT...AGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CTGGAATTGGTATTACTGTTTGGAACTCCAGATCCTGATTTATTCTCCAAAAGCATATCAATTTCTTCCTaGGACCACATCCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: LELVLLFGTPDPDLFSKSISISS*DHIPCF
Trigger: GAAGCAGGGGATGTGGTCCAAGGAAGAAATTGATAT...GCTTTTGGAGAATAAATCAGGATCTGGAGTTCCAAACAGTAATACCAATTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGTTTATCCGGAGCTCCTaGAGCTTCTCAATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKFIRSS*SFSISS
Trigger: TGAAGAAATTGAGAAGCTCAAGGAGCTCCGGATAAA...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000547146.6
ENST00000579850.5
CDS-3UTR CAA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTTTTATCCGGAGCTCCTaGAGCTTCTCAATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTFIRSS*SFSISS
Trigger: TGAAGAAATTGAGAAGCTCAAGGAGCTCCGGATAAA...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000547146.6
ENST00000579850.5
CDS-3UTR CAA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGCACCTGGCTCAGTGCTaGTCAACTCATGAACCACTT +
Preference number: 5 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVHLAQC*STHEPL
Trigger: AAGTGGTTCATGAGTTGACAAGCACTGAGCCAGGTG...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCTTATGGTTTGCAATTaGCCTTTTGATGGTCCACCA +
Preference number: 5 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLLMVCN*PFDGPP
Trigger: TGGTGGACCATCAAAAGGCAAATTGCAAACCATAAG...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCAGTTAATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGCTTATGGTTTGCAATTaGCCTTTTGATGGTCCACCA +
Preference number: 5 (lower is better)
Translates to: PVNVIFISYIKFCYPEDELMVCN*PFDGPP
Trigger: TGGTGGACCATCAAAAGGCAAATTGCAAACCATAAG...CTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATTAACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp GGGTTAACCAAATGTACCACCACAAGACCACCTCCTAGGTCTCTATACTTGTATAATTGGTATTACTGTTaGGAACTCCAGATCCTGATT +
Preference number: 5 (lower is better)
Translates to: GLTKCTTTRPPPRSLYLYNWYYC*ELQILI
Trigger: AATCAGGATCTGGAGTTCCAAACAGTAATACCAATT...ATACAAGTATAGAGACCTAGGAGGTGGTCTTGTGGTGGTACATTTGGTTAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp GGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTTGCTGCACACTGGAATaGGTATTACTGTTTGGAACT +
Preference number: 5 (lower is better)
Translates to: GQVSNLVFLKIRRSLVSSCCTLE*VLLFGT
Trigger: AGTTCCAAACAGTAATACCAATTCCAGTGTGCAGCA...AGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp ATTAAGCCTCTTGGGGGTTGCTCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGACTGTCAGTTCTGCTaGGGATATGGAAGAAGTGAT +
Preference number: 5 (lower is better)
Translates to: IKPLGGCSYFFEEVVINSDCQFC*GYGRSD
Trigger: ATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC...ACTGTTAATTACAACCTCTTCAAAGAAATAGGAGCAACCCCCAAGAGGCTTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGTGGGATCTGTTAGTGTaGTCAAAGGCAAGACAGATT +
Preference number: 5 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKWDLLV*SKARQI
Trigger: AATCTGTCTTGCCTTTGACAACACTAACAGATCCCA...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTTGGGATCTGTTAGTGTaGTCAAAGGCAAGACAGATT +
Preference number: 5 (lower is better)
Translates to: GQVSNLVFLKIRRSLVSSWDLLV*SKARQI
Trigger: AATCTGTCTTGCCTTTGACAACACTAACAGATCCCA...AGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGGTGTGCCTTCTTTGCTaGAACTGCCTATTTCTAAGA +
Preference number: 5 (lower is better)
Translates to: PRSLYLYAGQVSNLVFLKVCLLC*NCLFLR
Trigger: TCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACAC...CTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TCCTTATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCGTGTGCCTTCTTTGCTaGAACTGCCTATTTCTAAGA +
Preference number: 5 (lower is better)
Translates to: SLFPCNTKQGFMLKTPSLVCLLC*NCLFLR
Trigger: TCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACAC...GAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTAACAGTGTGCCTTCTTaGCTTGAACTGCCTATTTCT +
Preference number: 5 (lower is better)
Translates to: GQVSNLVFLKIRRSLVSSNSVPS*LELPIS
Trigger: AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTT...AGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TATTCCCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTAACAGTGTGCCTTCTTaGCTTGAACTGCCTATTTCT +
Preference number: 5 (lower is better)
Translates to: YSHVTLNRDLCLKLPASTNSVPS*LELPIS
Trigger: AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTT...AGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGGGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ATTTGCCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACATCAAACTTAGTCTTCTaGAAGATCAGAAGATCACTG +
Preference number: 5 (lower is better)
Translates to: ICLLMVHHLLRSHCGERTSNLVF*KIRRSL
Trigger: CAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGA...TGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp TTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTCAGGGCAATAGCATTTaGGCTCCACCATTAGCTCAA +
Preference number: 5 (lower is better)
Translates to: FEEVVINSVPSLLELPISQGNSI*APPLAQ
Trigger: TTGAGCTAATGGTGGAGCCAAAATGCTATTGCCCTG...AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394703.9
CDS-3UTR CAA 90 bp GGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTTCTTCTTCTTCCCATTaGACTGGTTTGGAAGTTGTG +
Preference number: 5 (lower is better)
Translates to: GQVSNLVFLKIRRSLVSSSSSSH*TGLEVV
Trigger: CACAACTTCCAAACCAGTCAAATGGGAAGAAGAAGA...AGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS TCA 90 bp TTTAATATTGTGAGACCAATACTATGTATGACATCTGTTGTTGACTaGAAGGTTATGAGTGGCCAGCTATGCTGGCTCATGCAGGTAATC +
Preference number: 5 (lower is better)
Translates to: FNIVRPILCMTSVVD*KVMSGQLCWLMQVI
Trigger: GATTACCTGCATGAGCCAGCATAGCTGGCCACTCATAACCTTTCAGTCAACAACAGATGTCATACATAGTATTGGTCTCACAATATTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480982.5
CDS GCA 90 bp AGTAATACATTACCAGGGAACGAAACATCCTTATGGTTTGCAATTTaGCTTTTGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAA +
Preference number: 5 (lower is better)
Translates to: SNTLPGNETSLWFAI*LLMVHHLLRSHCGE
Trigger: TTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCCCTGGTAATGTATTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578926.1
ENST00000582887.1
CDS-3UTR CAA 90 bp CCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATTTCATGTTACCCAGATaGTTTCTCTCCCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: PQQLSFRDSKLFLVAEVNFMLPR*FLSHVP
Trigger: AGGAACATGGGAGAGAAACAATCTGGGTAACATGAA...ATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTTTTATCCGGAGCTCCTaGAGCTTCTCAATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LVCWSSLKLSLLEDQKITFIRSS*SFSISS
Trigger: TGAAGAAATTGAGAAGCTCAAGGAGCTCCGGATAAA...AGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000547146.6
ENST00000579850.5
CDS-3UTR CAA 90 bp AATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGATTTGATTTCATCTTCCTaGGTCCATTCAGTACCCCCA +
Preference number: 5 (lower is better)
Translates to: NVIFISYIKFCYPEDEIDLISSS*VHSVPP
Trigger: TGGGGGTACTGAATGGACCAAGGAAGATGAAATCAA...ATCAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp TCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGTTGATTTCATCTTCCTaGGTCCATTCAGTACCCCCA +
Preference number: 5 (lower is better)
Translates to: SYFFEEVVINSVPSLLELLISSS*VHSVPP
Trigger: TGGGGGTACTGAATGGACCAAGGAAGATGAAATCAA...CAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ACAAGACCACCTCCTAGGTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTATTTGCAATTTGCCTTTaGATGGTCCACCATTTACTT +
Preference number: 5 (lower is better)
Translates to: TRPPPRSLYLYAGQVSNLFAICL*MVHHLL
Trigger: AAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAA...TAAGTTTGAGACTTGACCAGCATACAAGTATAGAGACCTAGGAGGTGGTCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCAATTCAGTTTGCAATTTGCCTTTaGATGGTCCACCATTTACTT +
Preference number: 5 (lower is better)
Translates to: IDFIFLGPFSTPTLFPIQFAICL*MVHHLL
Trigger: AAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAA...CTGAATTGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp CTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTCTTATGGTTTGCAATTaGCCTTTTGATGGTCCACCA +
Preference number: 5 (lower is better)
Translates to: LVCWSSLKLSLLEDQKITLMVCN*PFDGPP
Trigger: TGGTGGACCATCAAAAGGCAAATTGCAAACCATAAG...AGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ATTGATTTCATCTTCCTTGGTCCATTCAGTACCCCCACTCTGTTTCCAATTCAGAATTGGTATTACTGTTaGGAACTCCAGATCCTGATT +
Preference number: 5 (lower is better)
Translates to: IDFIFLGPFSTPTLFPIQNWYYC*ELQILI
Trigger: AATCAGGATCTGGAGTTCCAAACAGTAATACCAATT...CTGAATTGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp CTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTTGCTGCACACTGGAATaGGTATTACTGTTTGGAACT +
Preference number: 5 (lower is better)
Translates to: LVCWSSLKLSLLEDQKITCCTLE*VLLFGT
Trigger: AGTTCCAAACAGTAATACCAATTCCAGTGTGCAGCA...AGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp CCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATTGCTGCACACTGGAATaGGTATTACTGTTTGGAACT +
Preference number: 5 (lower is better)
Translates to: PQQLSFRDSKLFLVAEVNCCTLE*VLLFGT
Trigger: AGTTCCAAACAGTAATACCAATTCCAGTGTGCAGCA...ATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
CDS-3UTR CAA 90 bp GAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTTCTAAGAATGACTGTCAGTTCTGCTaGGGATATGGAAGAAGTGAT +
Preference number: 5 (lower is better)
Translates to: EVVINSVPSLLELPISKNDCQFC*GYGRSD
Trigger: ATCACTTCTTCCATATCCCAAGCAGAACTGACAGTC...ATTCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTAATCTTCGACATCCTTaGAATCTTCTGAAACAGGAC +
Preference number: 5 (lower is better)
Translates to: GQVSNLVFLKIRRSLVSSNLRHP*NLLKQD
Trigger: GTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATT...AGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCAATCTTCGACATCCTTaGAATCTTCTGAAACAGGAC +
Preference number: 5 (lower is better)
Translates to: WSSLKLSLLEDQKITGKLNLRHP*NLLKQD
Trigger: GTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATT...GAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp ACATCAAGTTCTGCTATCCTGAGGATGAGATTGATTTCATCTTCCTTGGTCCATAATCTTCGACATCCTTaGAATCTTCTGAAACAGGAC +
Preference number: 5 (lower is better)
Translates to: TSSSAILRMRLISSSLVHNLRHP*NLLKQD
Trigger: GTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATT...ATGGACCAAGGAAGATGAAATCAATCTCATCCTCAGGATAGCAGAACTTGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp GTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTAGACCAAATCTTCGACATCCTTaGAATCTTCTGAAACAGGAC +
Preference number: 5 (lower is better)
Translates to: VSNLVFLKIRRSLVSSRPNLRHP*NLLKQD
Trigger: GTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATT...TGGTCTAGAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACTTCAAACTTAGTCTTCTaGAAGATCAGAAGATCACTG +
Preference number: 5 (lower is better)
Translates to: PCNTKQGFMLKTPSLHSTSNLVF*KIRRSL
Trigger: CAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGA...AGTTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp AAAACTCCCAGCCTCCACTCAACTACATACTGTCATAAAACTCAACCTCAGATGAAACTGAATATACAATaGTTCCCTAGGCAACCAACT +
Preference number: 5 (lower is better)
Translates to: KTPSLHSTTYCHKTQPQMKLNIQ*FPRQPT
Trigger: AGTTGGTTGCCTAGGGAACAATTGTATATTCAGTTT...CATCTGAGGTTGAGTTTTATGACAGTATGTAGTTGAGTGGAGGCTGGGAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CCATGTAACACTAAACAGGGATTTATGCTTAAAACTCCCAGCCTCCACTCAACTAAACTGAATATACAATaGTTCCCTAGGCAACCAACT +
Preference number: 5 (lower is better)
Translates to: PCNTKQGFMLKTPSLHSTKLNIQ*FPRQPT
Trigger: AGTTGGTTGCCTAGGGAACAATTGTATATTCAGTTT...AGTTGAGTGGAGGCTGGGAGTTTTAAGCATAAATCCCTGTTTAGTGTTACATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAATTTTGGGGTCCACAGTaGTTCCTTGAGCTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNEFWGPQ*FLELLN
Trigger: ATTGAGAAGCTCAAGGAACAACTGTGGACCCCAAAA...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000412139.6
ENST00000579677.5
CDS-3UTR CAA 90 bp AATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGATTTTTGGGGTCCACAGTaGTTCCTTGAGCTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: NVIFISYIKFCYPEDEIDFWGPQ*FLELLN
Trigger: ATTGAGAAGCTCAAGGAACAACTGTGGACCCCAAAA...ATCAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412139.6
ENST00000579677.5
ENST00000584619.5
CDS-3UTR CAA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGTTGATTTCATCTTCCTaGGTCCATTCAGTACCCCCA +
Preference number: 5 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVLISSS*VHSVPP
Trigger: TGGGGGTACTGAATGGACCAAGGAAGATGAAATCAA...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTGGTAAGCTCTTTGCAATTTGCCTTTaGATGGTCCACCATTTACTT +
Preference number: 5 (lower is better)
Translates to: WSSLKLSLLEDQKITGKLFAICL*MVHHLL
Trigger: AAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAA...GAGCTTACCAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp AATGTCATTTTCATCAGCTACATCAAGTTCTGCTATCCTGAGGATGAGATTGATGTGTGCCTTCTTTGCTaGAACTGCCTATTTCTAAGA +
Preference number: 5 (lower is better)
Translates to: NVIFISYIKFCYPEDEIDVCLLC*NCLFLR
Trigger: TCTTAGAAATAGGCAGTTCAAGCAAAGAAGGCACAC...ATCAATCTCATCCTCAGGATAGCAGAACTTGATGTAGCTGATGAAAATGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
CDS-3UTR CAA 90 bp TTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGCCTATTAACAGTGTGCCTTCTTaGCTTGAACTGCCTATTTCT +
Preference number: 5 (lower is better)
Translates to: FFEEVVINSVPSLLELPINSVPS*LELPIS
Trigger: AGAAATAGGCAGTTCAAGCAAAGAAGGCACACTGTT...AATAGGCAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp AGTCTGAATGATGACTCTTGGTGTGTGACACTGCACTGTAACATTATCACTTGTTCAAACTTAGTCTTCTaGAAGATCAGAAGATCACTG +
Preference number: 5 (lower is better)
Translates to: SLNDDSWCVTLHCNIITCSNLVF*KIRRSL
Trigger: CAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGA...ACAAGTGATAATGTTACAGTGCAGTGTCACACACCAAGAGTCATCATTCAGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412139.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGTTCATGTTACCCAGATaGTTTCTCTCCCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVFMLPR*FLSHVP
Trigger: AGGAACATGGGAGAGAAACAATCTGGGTAACATGAA...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp TCCTATTTCTTTGAAGAGGTTGTAATTAACAGTGTGCCTTCTTTGCTTGAACTGAATCTTCGACATCCTTaGAATCTTCTGAAACAGGAC +
Preference number: 5 (lower is better)
Translates to: SYFFEEVVINSVPSLLELNLRHP*NLLKQD
Trigger: GTCCTGTTTCAGAAGATTCAAAGGATGTCGAAGATT...CAGTTCAAGCAAAGAAGGCACACTGTTAATTACAACCTCTTCAAAGAAATAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp GTCTCTATACTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGTCAAACTTAGTCTTCTaGAAGATCAGAAGATCACTG +
Preference number: 5 (lower is better)
Translates to: VSILVCWSSLKLSLLEDQSNLVF*KIRRSL
Trigger: CAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGA...CTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAGTATAGAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CTTGTATGCTGGTCAAGTCTCAAACTTAGTCTTCTTGAAGATCAGAAGATCACTAAACTGAATATACAATaGTTCCCTAGGCAACCAACT +
Preference number: 5 (lower is better)
Translates to: LVCWSSLKLSLLEDQKITKLNIQ*FPRQPT
Trigger: AGTTGGTTGCCTAGGGAACAATTGTATATTCAGTTT...AGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGAGACTTGACCAGCATACAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGGCTGAAGTGAATGAATCAAACTTAGTCTTCTaGAAGATCAGAAGATCACTG +
Preference number: 5 (lower is better)
Translates to: QQLSFRDSKLFLVAEVNESNLVF*KIRRSL
Trigger: CAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGA...TTCATTCACTTCAGCCACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS-3UTR CAA 90 bp CTGTACTTTAAACCACAGCAGTTAAGCTTTCGTGATTCTAAACTTTTCTTAGTGTCAAACTTAGTCTTCTaGAAGATCAGAAGATCACTG +
Preference number: 5 (lower is better)
Translates to: LYFKPQQLSFRDSKLFLVSNLVF*KIRRSL
Trigger: CAGTGATCTTCTGATCTTCAAGAAGACTAAGTTTGA...CACTAAGAAAAGTTTAGAATCACGAAAGCTTAACTGCTGTGGTTTAAAGTACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000447863.5
ENST00000454008.6
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
CDS GCA 72 bp TCCGACCCCGCCCGCAGTGCCCCGGCGCCGACAGCTTaGGCCAGCCGGCGGGAGCTAGCGGGCAGCAAGGGG +
Preference number: 6 (lower is better)
Translates to: SDPARSAPAPTA*ASRRELAGSKG
Trigger: CCCCTTGCTGCCCGCTAGCTCCCGCCGGCTGGCGCAAGCTGTCGGCGCCGGGGCACTGCGGGCGGGGTCGGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394703.9
ENST00000580710.5
ENST00000584457.5
CDS CAA 72 bp CTCCGACCCCGCCCGCAGTGCCCCGGCGCCGACAGCTaGCGCCAGCCGGCGGGAGCTAGCGGGCAGCAAGGG +
Preference number: 6 (lower is better)
Translates to: LRPRPQCPGADS*RQPAGASGQQG
Trigger: CCCTTGCTGCCCGCTAGCTCCCGCCGGCTGGCGCAAGCTGTCGGCGCCGGGGCACTGCGGGCGGGGTCGGAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394703.9
ENST00000580710.5
ENST00000584457.5
CDS GCA 72 bp AACGTCAGGAAGGCCAGGCTCCGACCCCGCCCGCAGTaGCCCGGCGCCGACAGCTTGCGCCAGCCGGCGGGA +
Preference number: 6 (lower is better)
Translates to: NVRKARLRPRPQ*PGADSLRQPAG
Trigger: TCCCGCCGGCTGGCGCAAGCTGTCGGCGCCGGGGCACTGCGGGCGGGGTCGGAGCCTGGCCTTCCTGACGTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394703.9
ENST00000434534.5
ENST00000579592.5
ENST00000580710.5
ENST00000584457.5
CDS GCA 72 bp AGGGAGGCCCTGGCCGGAACGTGCGGGGACGGCAGCTaGAACGTCAGGAAGGCCAGGCTCCGACCCCGCCCG +
Preference number: 6 (lower is better)
Translates to: REALAGTCGDGS*NVRKARLRPRP
Trigger: CGGGCGGGGTCGGAGCCTGGCCTTCCTGACGTTGCAGCTGCCGTCCCCGCACGTTCCGGCCAGGGCCTCCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394703.9
ENST00000434534.5
ENST00000579592.5
ENST00000580710.5
ENST00000584457.5
CDS GCA 72 bp CCGCCCGGCCCTAAGAGGGAGGCCCTGGCCGGAACGTaGGGGGACGGCAGCTGCAACGTCAGGAAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: PPGPKREALAGT*GDGSCNVRKAR
Trigger: CCTGGCCTTCCTGACGTTGCAGCTGCCGTCCCCGCACGTTCCGGCCAGGGCCTCCCTCTTAGGGCCGGGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394703.9
ENST00000434534.5
ENST00000579592.5
ENST00000580710.5
ENST00000584457.5
CDS GCA 72 bp CCGCCGCCATTTTCCGCCCCCGCCGGATCGCCGCTGTaGCTCGGCAGCCGCTCGCTTCCCTACTCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: PPPFSAPAGSPL*LGSRSLPYSAA
Trigger: GGCTGCAGAGTAGGGAAGCGAGCGGCTGCCGAGGCACAGCGGCGATCCGGCGGGGGCGGAAAATGGCGGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580710.5
CDS CCA 72 bp AGCCACGGGCACCGCCCGGCCCTAAGAGGGAGGCCCTaGCCGGAACGTGCGGGGACGGCAGCTGCAACGTCA +
Preference number: 6 (lower is better)
Translates to: SHGHRPALRGRP*PERAGTAAATS
Trigger: TGACGTTGCAGCTGCCGTCCCCGCACGTTCCGGCCAGGGCCTCCCTCTTAGGGCCGGGCGGTGCCCGTGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394703.9
ENST00000434534.5
ENST00000579592.5
ENST00000580710.5
ENST00000584457.5
CDS GCA 72 bp GCCGCTGTGCCTCGGCAGCCGCTCGCTTCCCTACTCTaGAGCCTGAGCCACGGGCACCGCCCGGCCCTAAGA +
Preference number: 6 (lower is better)
Translates to: AAVPRQPLASLL*SLSHGHRPALR
Trigger: TCTTAGGGCCGGGCGGTGCCCGTGGCTCAGGCTGCAGAGTAGGGAAGCGAGCGGCTGCCGAGGCACAGCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580710.5
CDS GCA 72 bp ACCAGGATGGAGGAAGCAGCCACGGGCGAGAGTGGCTaGAGCTGGAGTGAGCGAGCGCGACGAGCCACCGGA +
Preference number: 6 (lower is better)
Translates to: TRMEEAATGESG*SWSERARRATG
Trigger: TCCGGTGGCTCGTCGCGCTCGCTCACTCCAGCTGCAGCCACTCTCGCCCGTGGCTGCTTCCTCCATCCTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413276.6
ENST00000425406.5
ENST00000446796.6
ENST00000447863.5
ENST00000579677.5
CDS CCA 72 bp ATGGAGGAAGCAGCCACGGGCGAGAGTGGCTGCAGCTaGAGTGAGCGAGCGCGACGAGCCACCGGAAACGGA +
Preference number: 6 (lower is better)
Translates to: MEEAATGESGCS*SERARRATGNG
Trigger: TCCGTTTCCGGTGGCTCGTCGCGCTCGCTCACTCCAGCTGCAGCCACTCTCGCCCGTGGCTGCTTCCTCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413276.6
ENST00000447863.5
ENST00000579677.5
CDS TCA 72 bp ACTGCCACAGGATCACTGCCTGCCCATTTCTGCCAGTaGCAACACTTTGTGAGGTGTGAGGTTGGGGGTTTG +
Preference number: 6 (lower is better)
Translates to: TATGSLPAHFCQ*QHFVRCEVGGL
Trigger: CAAACCCCCAACCTCACACCTCACAAAGTGTTGTCACTGGCAGAAATGGGCAGGCAGTGATCCTGTGGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580010.1
CDS CAA 72 bp CTTCTTCCTAGCGCCGCCCCTATTGTTGCCCAGTCATaGCCATGCTTTATCCGGAGCTCCTTGAGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: LLPSAAPIVAQS*PCFIRSSLSFS
Trigger: TGAGAAGCTCAAGGAGCTCCGGATAAAGCATGGCAATGACTGGGCAACAATAGGGGCGGCGCTAGGAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000432937.6
ENST00000473521.5
ENST00000547146.6
ENST00000579850.5
CDS GCA 72 bp GGGCACCAAGACAGTTGTATGAGCCACTGTTTCCAGTaGAGTAACCCACAACACCCAATCACCCCTCTTTTT +
Preference number: 6 (lower is better)
Translates to: GHQDSCMSHCFQ*SNPQHPITPLF
Trigger: AAAAAGAGGGGTGATTGGGTGTTGTGGGTTACTGCACTGGAAACAGTGGCTCATACAACTGTCTTGGTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488352.2
CDS TCA 72 bp CTCAGCTATTTGTTTCAGGGCACCAAGACAGTTGTATaGGCCACTGTTTCCAGTGCAGTAACCCACAACACC +
Preference number: 6 (lower is better)
Translates to: LSYLFQGTKTVV*ATVSSAVTHNT
Trigger: GGTGTTGTGGGTTACTGCACTGGAAACAGTGGCTCATACAACTGTCTTGGTGCCCTGAAACAAATAGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488352.2
CDS CAA 90 bp CTAGACAACGGATGGATCAGCTACAGCCCTTCCCACAGAATCAAGTaGCCTTCCCTTAGCAACCAGCATCACTTTCATGTTACCCAGATT +
Preference number: 6 (lower is better)
Translates to: LDNGWISYSPSHRIK*PSLSNQHHFHVTQI
Trigger: AATCTGGGTAACATGAAAGTGATGCTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGGAAGGGCTGTAGCTGATCCATCCGTTGTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000414630.6
ENST00000420131.5
ENST00000423590.6
ENST00000425406.5
ENST00000425705.2
ENST00000428819.5
ENST00000432366.6
ENST00000432937.6
ENST00000434534.5
ENST00000446796.6
ENST00000447863.5
ENST00000448598.5
ENST00000449088.7
ENST00000453049.5
ENST00000579592.5
ENST00000579677.5
ENST00000579850.5
ENST00000582925.5
ENST00000583833.1
ENST00000584619.5
CDS CAA 90 bp AGTTGCCTTCCCTTAGCAACCAGCATCACTTTCATGTTACCCAGATaGTTTCTCTCCCATGTTCCTATCTCCGCAACACTTCTGCAGCCT +
Preference number: 6 (lower is better)
Translates to: SCLPLATSITFMLPR*FLSHVPISATLLQP
Trigger: AGGCTGCAGAAGTGTTGCGGAGATAGGAACATGGGAGAGAAACAATCTGGGTAACATGAAAGTGATGCTGGTTGCTAAGGGAAGGCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434534.5
CDS CAA 90 bp AGTTGCCTTCCCTTAGCAACCAGCATCACTTTCATGTTACCCAGATaGTTTCTCTCCCATGTTCCTATCTCCGCAACACTCACTTTCTCG +
Preference number: 6 (lower is better)
Translates to: SCLPLATSITFMLPR*FLSHVPISATLTFS
Trigger: CGAGAAAGTGAGTGTTGCGGAGATAGGAACATGGGAGAGAAACAATCTGGGTAACATGAAAGTGATGCTGGTTGCTAAGGGAAGGCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432366.6
CDS GCA 72 bp GATGGATCAGCTACAGCCCTTCCCACAGAATCAAGTTaGCTTCCCTTAGCAACCAGCATCACTTTCATGTTA +
Preference number: 6 (lower is better)
Translates to: DGSATALPTESS*LPLATSITFML
Trigger: TAACATGAAAGTGATGCTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGGAAGGGCTGTAGCTGATCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000414630.6
ENST00000420131.5
ENST00000423590.6
ENST00000425406.5
ENST00000425705.2
ENST00000428819.5
ENST00000432366.6
ENST00000432937.6
ENST00000434534.5
ENST00000446796.6
ENST00000447863.5
ENST00000448598.5
ENST00000449088.7
ENST00000453049.5
ENST00000579592.5
ENST00000579677.5
ENST00000579850.5
ENST00000582925.5
ENST00000583833.1
ENST00000584619.5
CDS GCA 72 bp GAGGACTTCAGTCTCCACGCCTTCAATCTGGTACTTTaGATGAGCACTAAACCCACTGAGGATGAGATTGAT +
Preference number: 6 (lower is better)
Translates to: EDFSLHAFNLVL*MSTKPTEDEID
Trigger: ATCAATCTCATCCTCAGTGGGTTTAGTGCTCATGCAAAGTACCAGATTGAAGGCGTGGAGACTGAAGTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547146.6
CDS CCA 72 bp AGAGGCTGCTCTTTGCTCCTGTGTATTTCTATGGTCTaGTCTCAGCTATTTGTTTCAGGGCACCAAGACAGT +
Preference number: 6 (lower is better)
Translates to: RGCSLLLCISMV*SQLFVSGHQDS
Trigger: ACTGTCTTGGTGCCCTGAAACAAATAGCTGAGACCAGACCATAGAAATACACAGGAGCAAAGAGCAGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488352.2
CDS CAA 90 bp CTGCACACAGGGAACGAAACATCCTTATGGTTTGCAATTTGCCTTTaGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACA +
Preference number: 6 (lower is better)
Translates to: LHTGNETSLWFAICL*MVHHLLRSHCGERT
Trigger: TGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCCCTGTGTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579850.5
CDS CAA 90 bp AGTTGCCTTCCCTTAGCAACCAGCATCACTTTCATGTTACCCAGATaGTTTCTCTCCCATGTTCCTATCTCCGCAACACTAGGTAGTTTC +
Preference number: 6 (lower is better)
Translates to: SCLPLATSITFMLPR*FLSHVPISATLGSF
Trigger: GAAACTACCTAGTGTTGCGGAGATAGGAACATGGGAGAGAAACAATCTGGGTAACATGAAAGTGATGCTGGTTGCTAAGGGAAGGCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583833.1
CDS GCA 72 bp CCCCTCAGTAACCTCATCATCTGCTACTTCTGTGGTTaGAGTCATGGTCACTTCAAAGCTCTGATCATTTTC +
Preference number: 6 (lower is better)
Translates to: PLSNLIICYFCG*SHGHFKALIIF
Trigger: GAAAATGATCAGAGCTTTGAAGTGACCATGACTGCAACCACAGAAGTAGCAGATGATGAGGTTACTGAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000425705.2
ENST00000430405.7
ENST00000432937.6
ENST00000447863.5
ENST00000449088.7
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
ENST00000584619.5
CDS CCA 72 bp AGCTTGTTTGAAGTAGGTAGGTGCCTGGAGTGCCAGTaGGCTGTAGATGGAAAGACTAAAGGAAAAAGGAAA +
Preference number: 6 (lower is better)
Translates to: SLFEVGRCLECQ*AVDGKTKGKRK
Trigger: TTTCCTTTTTCCTTTAGTCTTTCCATCTACAGCCCACTGGCACTCCAGGCACCTACCTACTTCAAACAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488352.2
CDS CAA 90 bp AGTTGCCTTCCCTTAGCAACCAGCATCACTTTCATGTTACCCAGATaGTTTCTCTCCCATGTTCCTATCTCCGCAACACTTTCCTGTTTT +
Preference number: 6 (lower is better)
Translates to: SCLPLATSITFMLPR*FLSHVPISATLSCF
Trigger: AAAACAGGAAAGTGTTGCGGAGATAGGAACATGGGAGAGAAACAATCTGGGTAACATGAAAGTGATGCTGGTTGCTAAGGGAAGGCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331242.12
ENST00000413276.6
ENST00000425406.5
ENST00000432937.6
ENST00000447863.5
ENST00000453049.5
ENST00000579677.5
ENST00000579850.5
ENST00000584619.5
CDS CAA 90 bp AGTTGCCTTCCCTTAGCAACCAGCATCACTTTCATGTTACCCAGATaGTTTCTCTCCCATGTTCCTATCTCCGCAACACTCTCTAAAAGT +
Preference number: 6 (lower is better)
Translates to: SCLPLATSITFMLPR*FLSHVPISATLSKS
Trigger: ACTTTTAGAGAGTGTTGCGGAGATAGGAACATGGGAGAGAAACAATCTGGGTAACATGAAAGTGATGCTGGTTGCTAAGGGAAGGCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414630.6
ENST00000423590.6
ENST00000446796.6
ENST00000579592.5
ENST00000582925.5
CDS TCA 72 bp ACTTCAGTCTCCACGCCTTCAATCTGGTACTTTGCATaGGCACTAAACCCACTGAGGATGAGATTGATTTCA +
Preference number: 6 (lower is better)
Translates to: TSVSTPSIWYFA*ALNPLRMRLIS
Trigger: TGAAATCAATCTCATCCTCAGTGGGTTTAGTGCTCATGCAAAGTACCAGATTGAAGGCGTGGAGACTGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547146.6
CDS TCA 72 bp ATGGCTGTATTATCTTCCAAGCGGGCAACTCTTATCTaGACATGCTGCACACAGGGAACGAAACATCCTTAT +
Preference number: 6 (lower is better)
Translates to: MAVLSSKRATLI*TCCTQGTKHPY
Trigger: ATAAGGATGTTTCGTTCCCTGTGTGCAGCATGTTCAGATAAGAGTTGCCCGCTTGGAAGATAATACAGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579850.5
CDS CAA 72 bp CTAAACCCACTGAGGATGAGATTGATTTCATCTTCCTaGGTCCATTCAGTACCCCCACTCTGTTTCCAATTC +
Preference number: 6 (lower is better)
Translates to: LNPLRMRLISSS*VHSVPPLCFQF
Trigger: GAATTGGAAACAGAGTGGGGGTACTGAATGGACCAAGGAAGATGAAATCAATCTCATCCTCAGTGGGTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547146.6
CDS CAA 90 bp GGTACAGCCTACTACACACGTAGGCTAGATGATCTATACAGTCTATaGCTCCTAGGCTACAAACCCTTACAGCATGTTACTGTACCAAAT +
Preference number: 6 (lower is better)
Translates to: GTAYYTRRLDDLYSL*LLGYKPLQHVTVPN
Trigger: ATTTGGTACAGTAACATGCTGTAAGGGTTTGTAGCCTAGGAGCAATAGACTGTATAGATCATCTAGCCTACGTGTGTAGTAGGCTGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480982.5
CDS CAA 90 bp ACATTACCAGGGAACGAAACATCCTTATGGTTTGCAATTTGCCTTTaGATGGTCCACCATTTACTTCGTAGCCATTGTGGTGAACGGACA +
Preference number: 6 (lower is better)
Translates to: TLPGNETSLWFAICL*MVHHLLRSHCGERT
Trigger: TGTCCGTTCACCACAATGGCTACGAAGTAAATGGTGGACCATCAAAAGGCAAATTGCAAACCATAAGGATGTTTCGTTCCCTGGTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578926.1
ENST00000582887.1
CDS GCA 72 bp TTTCTACTGTTACTGTGTCAGAATCCTCTTCCACTGTaGTCATACTCAAATCTAGACAACGGATGGATCAGC +
Preference number: 6 (lower is better)
Translates to: FLLLLCQNPLPL*SYSNLDNGWIS
Trigger: GCTGATCCATCCGTTGTCTAGATTTGAGTATGAGCACAGTGGAAGAGGATTCTGACACAGTAACAGTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000413276.6
ENST00000414630.6
ENST00000423590.6
ENST00000425406.5
ENST00000425705.2
ENST00000432366.6
ENST00000434534.5
ENST00000446796.6
ENST00000447863.5
ENST00000448598.5
ENST00000449088.7
ENST00000579592.5
ENST00000579677.5
ENST00000579850.5
ENST00000582925.5
ENST00000584619.5
CDS TCA 72 bp TATTGTGAGACCAATACTATGTATGACATCTGTTGTTaGCTGAAAGGTTATGAGTGGCCAGCTATGCTGGCT +
Preference number: 6 (lower is better)
Translates to: YCETNTMYDICC*LKGYEWPAMLA
Trigger: AGCCAGCATAGCTGGCCACTCATAACCTTTCAGTCAACAACAGATGTCATACATAGTATTGGTCTCACAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480982.5
CDS GCA 72 bp ACTTCCTCGTTACCCAAGGGAGATATTTCATCTAGTTaGTCATTCTGCAAAATCTGTATCTGTGTCACAGTC +
Preference number: 6 (lower is better)
Translates to: TSSLPKGDISSS*SFCKICICVTV
Trigger: GACTGTGACACAGATACAGATTTTGCAGAATGAGCAACTAGATGAAATATCTCCCTTGGGTAACGAGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000425705.2
ENST00000430405.7
ENST00000432937.6
ENST00000447863.5
ENST00000449088.7
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
ENST00000584619.5
CDS GCA 72 bp ATGGTATTCTTGCGCAGGGAAGCCAATTCTAGACTTTaGTTTGCTCTATTCGTAAAATACGCTTATCCTCTC +
Preference number: 6 (lower is better)
Translates to: MVFLRREANSRL*FALFVKYAYPL
Trigger: GAGAGGATAAGCGTATTTTACGAATAGAGCAAAGCAAAGTCTAGAATTGGCTTCCCTGCGCAAGAATACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480982.5
CDS CAA 72 bp TACTACACACGTAGGCTAGATGATCTATACAGTCTATaGCTCCTAGGCTACAAACCCTTACAGCATGTTACT +
Preference number: 6 (lower is better)
Translates to: YYTRRLDDLYSL*LLGYKPLQHVT
Trigger: AGTAACATGCTGTAAGGGTTTGTAGCCTAGGAGCAATAGACTGTATAGATCATCTAGCCTACGTGTGTAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480982.5
CDS CAA 90 bp TCTAGAGGTAGCAACTTCTCTTTTCCAAACAGTAATATGGTATTCTaGCGCAGGGAAGCCAATTCTAGACTTTGCTTTGCTCTATTCGTA +
Preference number: 6 (lower is better)
Translates to: SRGSNFSFPNSNMVF*RREANSRLCFALFV
Trigger: TACGAATAGAGCAAAGCAAAGTCTAGAATTGGCTTCCCTGCGCAAGAATACCATATTACTGTTTGGAAAAGAGAAGTTGCTACCTCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480982.5
CDS TCA 72 bp ATCTTCTTTAGTTGTAAACCATGCTTGGCTAACTGCTaGAACTTCCTCGTTACCCAAGGGAGATATTTCATC +
Preference number: 6 (lower is better)
Translates to: IFFSCKPCLANC*NFLVTQGRYFI
Trigger: GATGAAATATCTCCCTTGGGTAACGAGGAAGTTTCAGCAGTTAGCCAAGCATGGTTTACAACTAAAGAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000425705.2
ENST00000430405.7
ENST00000432937.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
ENST00000584619.5
CDS GCA 72 bp TCTATAAACTGCAAACAAAGGCCGGTTCAGACCCCATaGTATAGTCCTGTAGAAATCTTTTCTTTCGTCTTT +
Preference number: 6 (lower is better)
Translates to: SINCKQRPVQTP*YSPVEIFSFVF
Trigger: AAAGACGAAAGAAAAGATTTCTACAGGACTATAGCATGGGGTCTGAACCGGCCTTTGTTTGCAGTTTATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000331242.12
ENST00000394703.9
ENST00000412139.6
ENST00000413276.6
ENST00000425406.5
ENST00000432937.6
ENST00000447863.5
ENST00000547146.6
ENST00000579677.5
ENST00000579850.5
ENST00000584619.5
CDS CCA 72 bp CTAGAGGTAGCAACTTCTCTTTTCCAAACAGTAATATaGTATTCTTGCGCAGGGAAGCCAATTCTAGACTTT +
Preference number: 6 (lower is better)
Translates to: LEVATSLFQTVI*YSCAGKPILDF
Trigger: AAAGTCTAGAATTGGCTTCCCTGCGCAAGAATACCATATTACTGTTTGGAAAAGAGAAGTTGCTACCTCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480982.5