RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DMGDH (Homo sapiens)

Ensembl gene IDs: ENSG00000132837

Ensembl transcript IDs: ENST00000255189.8, ENST00000517853.5, ENST00000518477.5, ENST00000518707.1, ENST00000520388.5, ENST00000520855.1, ENST00000521052.5, ENST00000523732.1, ENST00000524206.1

Found 424 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTCAAGGCTTCCTGAAGTGGCTCTACGGAGCACTTCCCACAAGATaGCAGTGTTGTATGCGGCTGGAGAGCCCTCCACTTGCGGAAGGG +
Preference number: 1 (lower is better)
Translates to: GQGFLKWLYGALPTR*QCCMRLESPPLAEG
Trigger: CCCTTCCGCAAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGAAGTGCTCCGTAGAGCCACTTCAGGAAGCCTTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR CCA 90 bp ACATGTGTATCAACTTCACATAAGCCAACAGCAGGGGAAGGAGGCTaGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCGTC +
Preference number: 1 (lower is better)
Translates to: TCVSTSHKPTAGEGG*NNSKTEGSKGHCAV
Trigger: GACGGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTTATGTGAAGTTGATACACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR GCA 90 bp GAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTaGGCCGTCTCCCTTTGTGATGAAAGAGTTCTTCAGTACTCCATT +
Preference number: 1 (lower is better)
Translates to: EGGWNNSKTEGSKGH*AVSLCDERVLQYSI
Trigger: AATGGAGTACTGAAGAACTCTTTCATCACAAAGGGAGACGGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR GCA 90 bp TCCCACAAGATGGCAGTGTTGTATGCGGCTGGAGAGCCCTCCACTTaGGGAAGGGTTATCTTCACAATTACGGCTAAGAACGTATCCCTA +
Preference number: 1 (lower is better)
Translates to: SHKMAVLYAAGEPST*GRVIFTITAKNVSL
Trigger: TAGGGATACGTTCTTAGCCGTAATTGTGAAGATAACCCTTCCGCAAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR TCA 90 bp ATATGGACCAAACAAAAGCCCATCCCTTTCCTGTCGGAGATAATATaGTCCTTCCAGGTCACGGAGCACAGGCAGTTCTCGTTTCAAAGC +
Preference number: 1 (lower is better)
Translates to: IWTKQKPIPFLSEII*SFQVTEHRQFSFQS
Trigger: GCTTTGAAACGAGAACTGCCTGTGCTCCGTGACCTGGAAGGATCATATTATCTCCGACAGGAAAGGGATGGGCTTTTGTTTGGTCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000521052.5
3UTR CCA 90 bp AGATTCAATTATTTTTACCGCAGCTTTGGTCAAGGCTTCCTGAAGTaGCTCTACGGAGCACTTCCCACAAGATGGCAGTGTTGTATGCGG +
Preference number: 1 (lower is better)
Translates to: RFNYFYRSFGQGFLK*LYGALPTRWQCCMR
Trigger: CCGCATACAACACTGCCATCTTGTGGGAAGTGCTCCGTAGAGCCACTTCAGGAAGCCTTGACCAAAGCTGCGGTAAAAATAATTGAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR TCA 90 bp TCTGATCCAGAGCCAGTAATTAAAAGAAACTCCCCAGGAGATTGGTaGGAAACAGTCAGCTCAGCATACACTCGACCCTTGGGTGTTAAC +
Preference number: 1 (lower is better)
Translates to: SDPEPVIKRNSPGDW*ETVSSAYTRPLGVN
Trigger: GTTAACACCCAAGGGTCGAGTGTATGCTGAGCTGACTGTTTCTCACCAATCTCCTGGGGAGTTTCTTTTAATTACTGGCTCTGGATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR GCA 90 bp ATTCATGGCATAGGTTCCAAAATTGTCGATTCCCTCCTCCTGGCCTaGATTCATGATAGCGTCATACAGCGCCACAGAATCTTCTCTTCT +
Preference number: 1 (lower is better)
Translates to: IHGIGSKIVDSLLLA*IHDSVIQRHRIFSS
Trigger: AGAAGAGAAGATTCTGTGGCGCTGTATGACGCTATCATGAATGCAGGCCAGGAGGAGGGAATCGACAATTTTGGAACCTATGCCATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR TCA 90 bp AGTACAGATTCAATTATTTTTACCGCAGCTTTGGTCAAGGCTTCCTaGAGTGGCTCTACGGAGCACTTCCCACAAGATGGCAGTGTTGTA +
Preference number: 1 (lower is better)
Translates to: STDSIIFTAALVKAS*SGSTEHFPQDGSVV
Trigger: TACAACACTGCCATCTTGTGGGAAGTGCTCCGTAGAGCCACTTCAGGAAGCCTTGACCAAAGCTGCGGTAAAAATAATTGAATCTGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR TCA 90 bp ATTCTATCAGATCAAAAGGAGGTTCTCCATGCAGGATCCAGTCACTaGGATATTTCCCTACCCCACCAGCGTGGATTATGCCATATCCAA +
Preference number: 1 (lower is better)
Translates to: ILSDQKEVLHAGSSH*DISLPHQRGLCHIQ
Trigger: TTGGATATGGCATAATCCACGCTGGTGGGGTAGGGAAATATCTCAGTGACTGGATCCTGCATGGAGAACCTCCTTTTGATCTGATAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518477.5
3UTR CCA 90 bp ACTAAGATCTTCAGAGGTCAGTTTCTGAAGGACCTTTCTTGCCTGTaGCCCAGCAACTCCAAGAACTCCAAGCTCATCAGTTATGTTTTT +
Preference number: 1 (lower is better)
Translates to: TKIFRGQFLKDLSCL*PSNSKNSKLISYVF
Trigger: AAAAACATAACTGATGAGCTTGGAGTTCTTGGAGTTGCTGGGCCACAGGCAAGAAAGGTCCTTCAGAAACTGACCTCTGAAGATCTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR GCA 90 bp ATGTTAAACTTGCCAAATGGTGATAGGTCAGTTACCGCTACTCTTTaGATAACCTGTTTATACTCCGAGCCCACAGGCTCAAACCAGTTT +
Preference number: 1 (lower is better)
Translates to: MLNLPNGDRSVTATL*ITCLYSEPTGSNQF
Trigger: AAACTGGTTTGAGCCTGTGGGCTCGGAGTATAAACAGGTTATGCAAAGAGTAGCGGTAACTGACCTATCACCATTTGGCAAGTTTAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR CCA 90 bp GGAATGACATTTGCAAAGAGATGGTCCAGTAGTCTAATGGAATCTTaGCCTTTGATGTTAAACTTGCCAAATGGTGATAGGTCAGTTACC +
Preference number: 1 (lower is better)
Translates to: GMTFAKRWSSSLMES*PLMLNLPNGDRSVT
Trigger: GGTAACTGACCTATCACCATTTGGCAAGTTTAACATCAAAGGCCAAGATTCCATTAGACTACTGGACCATCTCTTTGCAAATGTCATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR TCA 90 bp CTTCTGATGTGCTTCAACACATTACGTTTAATACTTGAGTCTCTGTaGATCTTCGTGGAGGTTCTCCAGAAATGGACAAAAATTCAATAT +
Preference number: 1 (lower is better)
Translates to: LLMCFNTLRLILESL*IFVEVLQKWTKIQY
Trigger: ATATTGAATTTTTGTCCATTTCTGGAGAACCTCCACGAAGATTCACAGAGACTCAAGTATTAAACGTAATGTGTTGAAGCACATCAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR CAA 90 bp CTCCCAGCCAGCATGGAACCCCATGGAACACTTAGACTCCAGCCTTaGATAGAGCCCACTGACTCGTTGAGTCGGCCTCCCAGCAAACCG +
Preference number: 2 (lower is better)
Translates to: LPASMEPHGTLRLQP*IEPTDSLSRPPSKP
Trigger: CGGTTTGCTGGGAGGCCGACTCAACGAGTCAGTGGGCTCTATCAAAGGCTGGAGTCTAAGTGTTCCATGGGGTTCCATGCTGGCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR-3UTR GCA 90 bp GGAGCACTTCCCACAAGATGGCAGTGTTGTATGCGGCTGGAGAGCCCTCCACTTGGAAGCAAGGGCCACTaGGCCGTCTCCCTTTGTGAT +
Preference number: 2 (lower is better)
Translates to: GALPTRWQCCMRLESPPLGSKGH*AVSLCD
Trigger: ATCACAAAGGGAGACGGCGCAGTGGCCCTTGCTTCC...AAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGAAGTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR-3UTR TCA 90 bp CCCTCCTCCTGGCCTGCATTCATGATAGCGTCATACAGCGCCACAGAATCTTCTAGCCCACTGACTCGTTaGGTCGGCCTCCCAGCAAAC +
Preference number: 2 (lower is better)
Translates to: PSSWPAFMIASYSATESSSPLTR*VGLPAN
Trigger: GTTTGCTGGGAGGCCGACTCAACGAGTCAGTGGGCT...AGAAGATTCTGTGGCGCTGTATGACGCTATCATGAATGCAGGCCAGGAGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR-3UTR CCA 90 bp GCCTGTACTGAGTGTCCTGGCCTGGTTTGTAGAACCAGTGCGGCTGCTCCCAGCCCTACCCCACCAGCGTaGATTATGCCATATCCAAAG +
Preference number: 2 (lower is better)
Translates to: ACTECPGLVCRTSAAAPSPTPPA*IMPYPK
Trigger: CTTTGGATATGGCATAATCCACGCTGGTGGGGTAGG...GCTGGGAGCAGCCGCACTGGTTCTACAAACCAGGCCAGGACACTCAGTACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518477.5
3UTR CAA 90 bp CTTCCTGAAGTGGCTCTACGGAGCACTTCCCACAAGATGGCAGTGTaGTATGCGGCTGGAGAGCCCTCCACTTGCGGAAGGGTTATCTTC +
Preference number: 2 (lower is better)
Translates to: LPEVALRSTSHKMAV*YAAGEPSTCGRVIF
Trigger: GAAGATAACCCTTCCGCAAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGAAGTGCTCCGTAGAGCCACTTCAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR-3UTR TCA 90 bp CCCTCCTCCTGGCCTGCATTCATGATAGCGTCATACAGCGCCACAGAATCTTCTAAACTTGGCCTGTACTaGGTGTCCTGGCCTGGTTTG +
Preference number: 2 (lower is better)
Translates to: PSSWPAFMIASYSATESSKLGLY*VSWPGL
Trigger: CAAACCAGGCCAGGACACTCAGTACAGGCCAAGTTT...AGAAGATTCTGTGGCGCTGTATGACGCTATCATGAATGCAGGCCAGGAGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR-3UTR TCA 90 bp GATGGCCCATCTGCTCACCCAGCCATTTTCCTCCTTAAAATGGGCAAAGCAGCTAAACTTGGCCTGTACTaGGTGTCCTGGCCTGGTTTG +
Preference number: 2 (lower is better)
Translates to: DGPSAHPAIFLLKMGKAAKLGLY*VSWPGL
Trigger: CAAACCAGGCCAGGACACTCAGTACAGGCCAAGTTT...AGCTGCTTTGCCCATTTTAAGGAGGAAAATGGCTGGGTGAGCAGATGGGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR-3UTR GCA 90 bp CACTGCGCCGTCTCCCTTTGTGATGAAAGAGTTCTTCAGTACTCCATTGTTCTTGATGGCAGTGTTGTATaGGGCTGGAGAGCCCTCCAC +
Preference number: 2 (lower is better)
Translates to: HCAVSLCDERVLQYSIVLDGSVV*GWRALH
Trigger: GTGGAGGGCTCTCCAGCCGCATACAACACTGCCATC...AAGAACAATGGAGTACTGAAGAACTCTTTCATCACAAAGGGAGACGGCGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR-3UTR GCA 90 bp GATGGCCCATCTGCTCACCCAGCCATTTTCCTCCTTAAAATGGGCAAAGCAGCTGCTCAAACCAGTTTGTaGGGCGAAAACTTGGCCTGT +
Preference number: 2 (lower is better)
Translates to: DGPSAHPAIFLLKMGKAAAQTSL*GENLAC
Trigger: ACAGGCCAAGTTTTCGCCGCACAAACTGGTTTGAGC...AGCTGCTTTGCCCATTTTAAGGAGGAAAATGGCTGGGTGAGCAGATGGGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR CAA 90 bp CATGGAACACTTAGACTCCAGCCTTTGATAGAGCCCACTGACTCGTaGAGTCGGCCTCCCAGCAAACCGTTCTTCTTTAGGATAACCAAC +
Preference number: 2 (lower is better)
Translates to: HGTLRLQPLIEPTDS*SRPPSKPFFFRITN
Trigger: GTTGGTTATCCTAAAGAAGAACGGTTTGCTGGGAGGCCGACTCAACGAGTCAGTGGGCTCTATCAAAGGCTGGAGTCTAAGTGTTCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR-3UTR TCA 90 bp CACTGCGCCGTCTCCCTTTGTGATGAAAGAGTTCTTCAGTACTCCATTGTTCTTTTTGATAGAGCCCACTaGCTCGTTGAGTCGGCCTCC +
Preference number: 2 (lower is better)
Translates to: HCAVSLCDERVLQYSIVLFDRAH*LVESAS
Trigger: GGAGGCCGACTCAACGAGTCAGTGGGCTCTATCAAA...AAGAACAATGGAGTACTGAAGAACTCTTTCATCACAAAGGGAGACGGCGCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR-3UTR CCA 90 bp CATGATAGCGTCATACAGCGCCACAGAATCTTCTCTTCTGTGATACAGCTCCCATGCTCCCAGCCAGCATaGAACCCCATGGAACACTTA +
Preference number: 2 (lower is better)
Translates to: HDSVIQRHRIFSSVIQLPCSQPA*NPMEHL
Trigger: TAAGTGTTCCATGGGGTTCCATGCTGGCTGGGAGCA...TGGGAGCTGTATCACAGAAGAGAAGATTCTGTGGCGCTGTATGACGCTATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR-3UTR TCA 90 bp ACAAGAACACGATTCACCCTAATAAGGCCTGATGGCCCATCTGCTCACCCAGCCCTTTTCCCTACTTGCTaGCAGGTTTTGACAAGAACA +
Preference number: 2 (lower is better)
Translates to: TRTRFTLIRPDGPSAHPALFPTC*QVLTRT
Trigger: TGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAAAG...GGCTGGGTGAGCAGATGGGCCATCAGGCCTTATTAGGGTGAATCGTGTTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR-3UTR TCA 90 bp CCAAAATTGTCGATTCCCTCCTCCTGGCCTGCATTCATGATAGCGTCATACAGCGATGTTGAACCGGAATaGGAGGATGTTCTAGTCCAA +
Preference number: 2 (lower is better)
Translates to: PKLSIPSSWPAFMIASYSDVEPE*EDVLVQ
Trigger: TTGGACTAGAACATCCTCTCATTCCGGTTCAACATC...GCTGTATGACGCTATCATGAATGCAGGCCAGGAGGAGGGAATCGACAATTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518477.5
3UTR-3UTR TCA 90 bp TTTCCCTACTTGCTGACAGGTTTTGACAAGAACACGATTCACCCTAATAAGGCCGAGGAACTCCATTGGTaGCCCAGGAGTCCTGAACTT +
Preference number: 2 (lower is better)
Translates to: FPYLLTGFDKNTIHPNKAEELHW*PRSPEL
Trigger: AAGTTCAGGACTCCTGGGTCACCAATGGAGTTCCTC...GGCCTTATTAGGGTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518477.5
3UTR-3UTR GCA 90 bp ACGTCCCATGTTCCATCTGACCTGGCTTTCAGAGAAGTTACTGGTGCAGGATATTACTGTTCTGTTGCATaGCAGCCAGTCCGAGTCATT +
Preference number: 2 (lower is better)
Translates to: TSHVPSDLAFREVTGAGYYCSVA*QPVRVI
Trigger: AATGACTCGGACTGGCTGGCATGCAACAGAACAGTA...ATATCCTGCACCAGTAACTTCTCTGAAAGCCAGGTCAGATGGAACATGGGACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524206.1
3UTR-3UTR CCA 90 bp CATGATAGCGTCATACAGCGCCACAGAATCTTCTCTTCTGTGATACAGCTCCCATTGGCCTCAGTGTACTaGGTTGTTGTCCATTTGCCA +
Preference number: 2 (lower is better)
Translates to: HDSVIQRHRIFSSVIQLPLASVY*VVVHLP
Trigger: TGGCAAATGGACAACAACCCAGTACACTGAGGCCAA...TGGGAGCTGTATCACAGAAGAGAAGATTCTGTGGCGCTGTATGACGCTATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR-3UTR CCA 90 bp CACTGCGCCGTCTCCCTTTGTGATGAAAGAGTTCTTCAGTACTCCATTGTTCTTTTGGCCTCAGTGTACTaGGTTGTTGTCCATTTGCCA +
Preference number: 2 (lower is better)
Translates to: HCAVSLCDERVLQYSIVLLASVY*VVVHLP
Trigger: TGGCAAATGGACAACAACCCAGTACACTGAGGCCAA...AAGAACAATGGAGTACTGAAGAACTCTTTCATCACAAAGGGAGACGGCGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR CAA 90 bp AGGAACTCCATTGGTGACCCAGGAGTCCTGAACTTTCATTTTCTCTaGACTTTCATATGGACCAAACAAAAGCCCATCCCTTTCCTGTCG +
Preference number: 2 (lower is better)
Translates to: RNSIGDPGVLNFHFL*TFIWTKQKPIPFLS
Trigger: CGACAGGAAAGGGATGGGCTTTTGTTTGGTCCATATGAAAGTCAAGAGAAAATGAAAGTTCAGGACTCCTGGGTCACCAATGGAGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000521052.5
3UTR-3UTR GCA 90 bp TGTTCTTTTCCCTACTTGCTGACAGGTTTTGACAAGAACACGATTCACCCTAATGCTCAAACCAGTTTGTaGGGCGAAAACTTGGCCTGT +
Preference number: 2 (lower is better)
Translates to: CSFPYLLTGFDKNTIHPNAQTSL*GENLAC
Trigger: ACAGGCCAAGTTTTCGCCGCACAAACTGGTTTGAGC...ATTAGGGTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAAAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR-3UTR CCA 90 bp GGATTTGTATCACAGTTCATCTCTAACCCCCAGGCTCTGAAGGCTTTCTCCAGGTGTAAAACCCACCTTTaGAATGACATTTGCAAAGAG +
Preference number: 2 (lower is better)
Translates to: GFVSQFISNPQALKAFSRCKTHL*NDICKE
Trigger: CTCTTTGCAAATGTCATTCCAAAGGTGGGTTTTACA...CCTGGAGAAAGCCTTCAGAGCCTGGGGGTTAGAGATGAACTGTGATACAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR-3UTR TCA 90 bp TTGACTTTCATATGGACCAAACAAAAGCCCATCCCTTTCCTGTCGGAGATAATAACGAGCCCAAAATCCTaGCCAGTTTCTTCTTCCAGT +
Preference number: 2 (lower is better)
Translates to: LTFIWTKQKPIPFLSEIITSPKS*PVSSSS
Trigger: ACTGGAAGAAGAAACTGGTCAGGATTTTGGGCTCGT...TATTATCTCCGACAGGAAAGGGATGGGCTTTTGTTTGGTCCATATGAAAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521052.5
3UTR-3UTR GCA 90 bp TTCTTGCCTGTGGCCCAGCAACTCCAAGAACTCCAAGCTCATCAGTTATGTTTTGTTACCGCTACTCTTTaGATAACCTGTTTATACTCC +
Preference number: 2 (lower is better)
Translates to: FLPVAQQLQELQAHQLCFVTATL*ITCLYS
Trigger: GGAGTATAAACAGGTTATGCAAAGAGTAGCGGTAAC...AAAACATAACTGATGAGCTTGGAGTTCTTGGAGTTGCTGGGCCACAGGCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR-3UTR CCA 90 bp TGTTGCATGCCAGCCAGTCCGAGTCATTTGATATTTAAATTCATCTACCCTTACAAGTCTGATACTACCTaGCTGATGGAATCCCACCAC +
Preference number: 2 (lower is better)
Translates to: CCMPASPSHLIFKFIYPYKSDTT*LMESHH
Trigger: GTGGTGGGATTCCATCAGCCAGGTAGTATCAGACTT...GTAAGGGTAGATGAATTTAAATATCAAATGACTCGGACTGGCTGGCATGCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524206.1
3UTR-3UTR CCA 90 bp GCCCATCTGCTCACCCAGCCATTTTCCTCCTTAAAATGGGCAAAGCAGCTATTCAGTCTAATGGAATCTTaGCCTTTGATGTTAAACTTG +
Preference number: 2 (lower is better)
Translates to: AHLLTQPFSSLKWAKQLFSLMES*PLMLNL
Trigger: CAAGTTTAACATCAAAGGCCAAGATTCCATTAGACT...GAATAGCTGCTTTGCCCATTTTAAGGAGGAAAATGGCTGGGTGAGCAGATGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR CAA 90 bp ATGATGTCAGCCTTTTTCAAGACAGGAACCATTTCCATGGCAGCTTaGATGTGTTCCATGATTCGATCTAGATCAGACTCAAAGAGTTCC +
Preference number: 2 (lower is better)
Translates to: MMSAFFKTGTISMAA*MCSMIRSRSDSKSS
Trigger: GGAACTCTTTGAGTCTGATCTAGATCGAATCATGGAACACATCAAAGCTGCCATGGAAATGGTTCCTGTCTTGAAAAAGGCTGACATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518477.5
3UTR CAA 90 bp ATAGGCAGAATGTCAGGAGAATACGTGATAGGACCATTGACAACATaGATGATGTCAGCCTTTTTCAAGACAGGAACCATTTCCATGGCA +
Preference number: 2 (lower is better)
Translates to: IGRMSGEYVIGPLTT*MMSAFFKTGTISMA
Trigger: TGCCATGGAAATGGTTCCTGTCTTGAAAAAGGCTGACATCATCAATGTTGTCAATGGTCCTATCACGTATTCTCCTGACATTCTGCCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518477.5
3UTR CAA 90 bp AGATGGTCCAGTAGTCTAATGGAATCTTGGCCTTTGATGTTAAACTaGCCAAATGGTGATAGGTCAGTTACCGCTACTCTTTGCATAACC +
Preference number: 2 (lower is better)
Translates to: RWSSSLMESWPLMLN*PNGDRSVTATLCIT
Trigger: GGTTATGCAAAGAGTAGCGGTAACTGACCTATCACCATTTGGCAAGTTTAACATCAAAGGCCAAGATTCCATTAGACTACTGGACCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR-3UTR CCA 90 bp ATGACATTTGCAAAGAGATGGTCCAGTAGTCTAATGGAATCTTGGCCTTTGATGATGATTCTCTTGCTTTaGCCTCAGTGTACTGGGTTG +
Preference number: 2 (lower is better)
Translates to: MTFAKRWSSSLMESWPLMMILLL*PQCTGL
Trigger: CAACCCAGTACACTGAGGCCAAAGCAAGAGAATCAT...CATCAAAGGCCAAGATTCCATTAGACTACTGGACCATCTCTTTGCAAATGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR CAA 90 bp AATGCCTATGACTCCATCCAAAGGCAGCTGATTTTCCTTTTGCTCTaGATTAATGCATTTCTTCCATCTCCAACTAAACAAAGGCTACTG +
Preference number: 2 (lower is better)
Translates to: NAYDSIQRQLIFLLL*INAFLPSPTKQRLL
Trigger: CAGTAGCCTTTGTTTAGTTGGAGATGGAAGAAATGCATTAATCAAGAGCAAAAGGAAAATCAGCTGCCTTTGGATGGAGTCATAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR-3UTR TCA 90 bp TTGATGTGTTCCATGATTCGATCTAGATCAGACTCAAAGAGTTCCTTTCCAAAAGATGTTGAACCGGAATaGGAGGATGTTCTAGTCCAA +
Preference number: 2 (lower is better)
Translates to: LMCSMIRSRSDSKSSFPKDVEPE*EDVLVQ
Trigger: TTGGACTAGAACATCCTCTCATTCCGGTTCAACATC...TTTTGGAAAGGAACTCTTTGAGTCTGATCTAGATCGAATCATGGAACACATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000521052.5
3UTR-3UTR GCA 90 bp CACCCAGCCATTTTCCTCCTTAAAATGGGCAAAGCAGCTATTCTGATCCTTATTATATCCACCTTTGACTaGTTCTTCTTCAATCCATCT +
Preference number: 2 (lower is better)
Translates to: HPAIFLLKMGKAAILILIISTFD*FFFNPS
Trigger: AGATGGATTGAAGAAGAAGCAGTCAAAGGTGGATAT...AATAAGGATCAGAATAGCTGCTTTGCCCATTTTAAGGAGGAAAATGGCTGGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR CCA 72 bp GCGGCGAAAACTTGGCCTGTACTGAGTGTCCTGGCCTaGTTTGTAGAACCAGTGCGGCTGCTCCCAGCCAGC +
Preference number: 3 (lower is better)
Translates to: AAKTWPVLSVLA*FVEPVRLLPAS
Trigger: GCTGGCTGGGAGCAGCCGCACTGGTTCTACAAACCAGGCCAGGACACTCAGTACAGGCCAAGTTTTCGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR GCA 72 bp TCTACGGAGCACTTCCCACAAGATGGCAGTGTTGTATaGGGCTGGAGAGCCCTCCACTTGCGGAAGGGTTAT +
Preference number: 3 (lower is better)
Translates to: STEHFPQDGSVV*GWRALHLRKGY
Trigger: ATAACCCTTCCGCAAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGAAGTGCTCCGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR GCA 72 bp GTTTATACTCCGAGCCCACAGGCTCAAACCAGTTTGTaGGGCGAAAACTTGGCCTGTACTGAGTGTCCTGGC +
Preference number: 3 (lower is better)
Translates to: VYTPSPQAQTSL*GENLACTECPG
Trigger: GCCAGGACACTCAGTACAGGCCAAGTTTTCGCCGCACAAACTGGTTTGAGCCTGTGGGCTCGGAGTATAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR CCA 72 bp TCAACTTCACATAAGCCAACAGCAGGGGAAGGAGGCTaGAACAACTCCAAGACGGAAGGAAGCAAGGGCCAC +
Preference number: 3 (lower is better)
Translates to: STSHKPTAGEGG*NNSKTEGSKGH
Trigger: GTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTTATGTGAAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR GCA 72 bp TGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTaGGCCGTCTCCCTTTGTGATGAAAGAGTTCTTCAG +
Preference number: 3 (lower is better)
Translates to: WNNSKTEGSKGH*AVSLCDERVLQ
Trigger: CTGAAGAACTCTTTCATCACAAAGGGAGACGGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR-3UTR CAA 90 bp TTGGCCTGTACTGAGTGTCCTGGCCTGGTTTGTAGAACCAGTGCGGCTGCTCCCTGTTCTTTTCCCTACTaGCTGACAGGTTTTGACAAG +
Preference number: 3 (lower is better)
Translates to: LACTECPGLVCRTSAAAPCSFPY*LTGFDK
Trigger: CTTGTCAAAACCTGTCAGCAAGTAGGGAAAAGAACA...GGGAGCAGCCGCACTGGTTCTACAAACCAGGCCAGGACACTCAGTACAGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR-3UTR CAA 90 bp ACAAGAACACGATTCACCCTAATAAGGCCTGATGGCCCATCTGCTCACCCAGCCCAGTGTACTGGGTTGTaGTCCATTTGCCATAGCGAT +
Preference number: 3 (lower is better)
Translates to: TRTRFTLIRPDGPSAHPAQCTGL*SICHSD
Trigger: ATCGCTATGGCAAATGGACAACAACCCAGTACACTG...GGCTGGGTGAGCAGATGGGCCATCAGGCCTTATTAGGGTGAATCGTGTTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR GCA 72 bp ATGGCAGTGTTGTATGCGGCTGGAGAGCCCTCCACTTaGGGAAGGGTTATCTTCACAATTACGGCTAAGAAC +
Preference number: 3 (lower is better)
Translates to: MAVLYAAGEPST*GRVIFTITAKN
Trigger: GTTCTTAGCCGTAATTGTGAAGATAACCCTTCCGCAAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR CCA 72 bp TACCCTTACAGGGGTGGTAGCAAGTCTGATACTACCTaGCTGATGGAATCCCACCACCTGACCAGTTTCTTC +
Preference number: 3 (lower is better)
Translates to: YPYRGGSKSDTT*LMESHHLTSFF
Trigger: GAAGAAACTGGTCAGGTGGTGGGATTCCATCAGCCAGGTAGTATCAGACTTGCTACCACCCCTGTAAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524206.1
3UTR-3UTR CAA 90 bp CATAAGCCAACAGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCTGTTCTTTTCCCTACTaGCTGACAGGTTTTGACAAG +
Preference number: 3 (lower is better)
Translates to: HKPTAGEGGWNNSKTEGSCSFPY*LTGFDK
Trigger: CTTGTCAAAACCTGTCAGCAAGTAGGGAAAAGAACA...GCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR TCA 72 bp AGACCCCTGTGGTGTTTCAACGTCCCATGTTCCATCTaGCCTGGCTTTCAGAGAAGTTACTGGTGCAGGATA +
Preference number: 3 (lower is better)
Translates to: RPLWCFNVPCSI*PGFQRSYWCRI
Trigger: TATCCTGCACCAGTAACTTCTCTGAAAGCCAGGTCAGATGGAACATGGGACGTTGAAACACCACAGGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524206.1
3UTR TCA 72 bp AAACAAAAGCCCATCCCTTTCCTGTCGGAGATAATATaGTCCTTCCAGGTCACGGAGCACAGGCAGTTCTCG +
Preference number: 3 (lower is better)
Translates to: KQKPIPFLSEII*SFQVTEHRQFS
Trigger: CGAGAACTGCCTGTGCTCCGTGACCTGGAAGGATCATATTATCTCCGACAGGAAAGGGATGGGCTTTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000521052.5
3UTR TCA 72 bp GATCAAAAGGAGGTTCTCCATGCAGGATCCAGTCACTaGGATATTTCCCTACCCCACCAGCGTGGATTATGC +
Preference number: 3 (lower is better)
Translates to: DQKEVLHAGSSH*DISLPHQRGLC
Trigger: GCATAATCCACGCTGGTGGGGTAGGGAAATATCTCAGTGACTGGATCCTGCATGGAGAACCTCCTTTTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518477.5
3UTR TCA 72 bp GGTTTTGACAAGAACACGATTCACCCTAATAAGGCCTaGTGGCCCATCTGCTCACCCAGCCATTTTCCTCCT +
Preference number: 3 (lower is better)
Translates to: GFDKNTIHPNKA*WPICSPSHFPP
Trigger: AGGAGGAAAATGGCTGGGTGAGCAGATGGGCCATCAGGCCTTATTAGGGTGAATCGTGTTCTTGTCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR CCA 72 bp TATTTTTACCGCAGCTTTGGTCAAGGCTTCCTGAAGTaGCTCTACGGAGCACTTCCCACAAGATGGCAGTGT +
Preference number: 3 (lower is better)
Translates to: YFYRSFGQGFLK*LYGALPTRWQC
Trigger: ACACTGCCATCTTGTGGGAAGTGCTCCGTAGAGCCACTTCAGGAAGCCTTGACCAAAGCTGCGGTAAAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR CCA 72 bp ATCCAGTCACTGAGATATTTCCCTACCCCACCAGCGTaGATTATGCCATATCCAAAGCCTATAGCCACCCAG +
Preference number: 3 (lower is better)
Translates to: IQSLRYFPTPPA*IMPYPKPIATQ
Trigger: CTGGGTGGCTATAGGCTTTGGATATGGCATAATCCACGCTGGTGGGGTAGGGAAATATCTCAGTGACTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518477.5
3UTR-3UTR CAA 90 bp TGTTCTTTTCCCTACTTGCTGACAGGTTTTGACAAGAACACGATTCACCCTAATGAGCCCACTGACTCGTaGAGTCGGCCTCCCAGCAAA +
Preference number: 3 (lower is better)
Translates to: CSFPYLLTGFDKNTIHPNEPTDS*SRPPSK
Trigger: TTTGCTGGGAGGCCGACTCAACGAGTCAGTGGGCTC...ATTAGGGTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAAAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR TCA 72 bp TCAATTATTTTTACCGCAGCTTTGGTCAAGGCTTCCTaGAGTGGCTCTACGGAGCACTTCCCACAAGATGGC +
Preference number: 3 (lower is better)
Translates to: SIIFTAALVKAS*SGSTEHFPQDG
Trigger: GCCATCTTGTGGGAAGTGCTCCGTAGAGCCACTTCAGGAAGCCTTGACCAAAGCTGCGGTAAAAATAATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR TCA 72 bp GATTTGTATCACAGTTCATCTCTAACCCCCAGGCTCTaGAGGCTTTCTCCAGGCGTAAGGCATTCATGGCAT +
Preference number: 3 (lower is better)
Translates to: DLYHSSSLTPRL*RLSPGVRHSWH
Trigger: ATGCCATGAATGCCTTACGCCTGGAGAAAGCCTTCAGAGCCTGGGGGTTAGAGATGAACTGTGATACAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR GCA 72 bp ATAGGTTCCAAAATTGTCGATTCCCTCCTCCTGGCCTaGATTCATGATAGCGTCATACAGCGCCACAGAATC +
Preference number: 3 (lower is better)
Translates to: IGSKIVDSLLLA*IHDSVIQRHRI
Trigger: GATTCTGTGGCGCTGTATGACGCTATCATGAATGCAGGCCAGGAGGAGGGAATCGACAATTTTGGAACCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR GCA 72 bp TTGCCAAATGGTGATAGGTCAGTTACCGCTACTCTTTaGATAACCTGTTTATACTCCGAGCCCACAGGCTCA +
Preference number: 3 (lower is better)
Translates to: LPNGDRSVTATL*ITCLYSEPTGS
Trigger: TGAGCCTGTGGGCTCGGAGTATAAACAGGTTATGCAAAGAGTAGCGGTAACTGACCTATCACCATTTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR-3UTR CAA 90 bp GATCCTTCCAGGTCACGGAGCACAGGCAGTTCTCGTTTCAAAGCTTTCACTTCATTCTTCAGTACTCCATaGTTCTTTTCCCTACTTGCT +
Preference number: 3 (lower is better)
Translates to: DPSRSRSTGSSRFKAFTSFFSTP*FFSLLA
Trigger: AGCAAGTAGGGAAAAGAACAATGGAGTACTGAAGAA...TGAAGTGAAAGCTTTGAAACGAGAACTGCCTGTGCTCCGTGACCTGGAAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518477.5
3UTR-3UTR CAA 90 bp AATATTCCAGTCCAGCTTCCAAAGGATTTGTATCACAGTTCATCTCTAACCCCCAAACTCCCCAGGAGATaGGTGAGAAACAGTCAGCTC +
Preference number: 3 (lower is better)
Translates to: NIPVQLPKDLYHSSSLTPKLPRR*VRNSQL
Trigger: GAGCTGACTGTTTCTCACCAATCTCCTGGGGAGTTT...GGGGGTTAGAGATGAACTGTGATACAAATCCTTTGGAAGCTGGACTGGAATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR TCA 72 bp AGAGTTCCTTTCCAAAACCTGGAGGAACTCCATTGGTaGCCCAGGAGTCCTGAACTTTCATTTTCTCTTGAC +
Preference number: 3 (lower is better)
Translates to: RVPFQNLEELHW*PRSPELSFSLD
Trigger: GTCAAGAGAAAATGAAAGTTCAGGACTCCTGGGTCACCAATGGAGTTCCTCCAGGTTTTGGAAAGGAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000521052.5
3UTR GCA 72 bp GGATCCAATTCTATCAGATCAAAAGGAGGTTCTCCATaGAGGATCCAGTCACTGAGATATTTCCCTACCCCA +
Preference number: 3 (lower is better)
Translates to: GSNSIRSKGGSP*RIQSLRYFPTP
Trigger: TGGGGTAGGGAAATATCTCAGTGACTGGATCCTGCATGGAGAACCTCCTTTTGATCTGATAGAATTGGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518477.5
3UTR-3UTR CAA 90 bp GGATCCAATTCTATCAGATCAAAAGGAGGTTCTCCATGCAGGATCCAGTCACTGAACAACATATTGATGTaGAACCGGAATGAGAGGATG +
Preference number: 3 (lower is better)
Translates to: GSNSIRSKGGSPCRIQSLNNILM*NRNERM
Trigger: CATCCTCTCATTCCGGTTCAACATCAATATGTTGTT...CAGTGACTGGATCCTGCATGGAGAACCTCCTTTTGATCTGATAGAATTGGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518477.5
3UTR-3UTR CAA 90 bp CACTGCGCCGTCTCCCTTTGTGATGAAAGAGTTCTTCAGTACTCCATTGTTCTTTTCTTCAGTACTCCATaGTTCTTTTCCCTACTTGCT +
Preference number: 3 (lower is better)
Translates to: HCAVSLCDERVLQYSIVLFFSTP*FFSLLA
Trigger: AGCAAGTAGGGAAAAGAACAATGGAGTACTGAAGAA...AAGAACAATGGAGTACTGAAGAACTCTTTCATCACAAAGGGAGACGGCGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517853.5
ENST00000518477.5
ENST00000523732.1
3UTR-3UTR CAA 90 bp TATCAGATCAAAAGGAGGTTCTCCATGCAGGATCCAGTCACTGAGATATTTCCCGGACCATTGACAACATaGATGATGTCAGCCTTTTTC +
Preference number: 3 (lower is better)
Translates to: YQIKRRFSMQDPVTEIFPGPLTT*MMSAFF
Trigger: GAAAAAGGCTGACATCATCAATGTTGTCAATGGTCC...GGGAAATATCTCAGTGACTGGATCCTGCATGGAGAACCTCCTTTTGATCTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518477.5
3UTR-3UTR CAA 90 bp ATTCATGGCATAGGTTCCAAAATTGTCGATTCCCTCCTCCTGGCCTGCATTCATTACGTGATAGGACCATaGACAACATTGATGATGTCA +
Preference number: 3 (lower is better)
Translates to: IHGIGSKIVDSLLLACIHYVIGP*TTLMMS
Trigger: TGACATCATCAATGTTGTCAATGGTCCTATCACGTA...ATGAATGCAGGCCAGGAGGAGGGAATCGACAATTTTGGAACCTATGCCATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518477.5
3UTR-3UTR CAA 90 bp CTTGACTTTCATATGGACCAAACAAAAGCCCATCCCTTTCCTGTCGGAGATAATAACAACATATTGATGTaGAACCGGAATGAGAGGATG +
Preference number: 3 (lower is better)
Translates to: LDFHMDQTKAHPFPVGDNNNILM*NRNERM
Trigger: CATCCTCTCATTCCGGTTCAACATCAATATGTTGTT...ATTATCTCCGACAGGAAAGGGATGGGCTTTTGTTTGGTCCATATGAAAGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000521052.5
3UTR-3UTR CAA 90 bp GACTTTCATATGGACCAAACAAAAGCCCATCCCTTTCCTGTCGGAGATAATATGCGATGTAACAACATATaGATGTTGAACCGGAATGAG +
Preference number: 3 (lower is better)
Translates to: DFHMDQTKAHPFPVGDNMRCNNI*MLNRNE
Trigger: CTCATTCCGGTTCAACATCAATATGTTGTTACATCG...CATATTATCTCCGACAGGAAAGGGATGGGCTTTTGTTTGGTCCATATGAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000521052.5
3UTR CCA 72 bp TTTGCAAAGAGATGGTCCAGTAGTCTAATGGAATCTTaGCCTTTGATGTTAAACTTGCCAAATGGTGATAGG +
Preference number: 3 (lower is better)
Translates to: FAKRWSSSLMES*PLMLNLPNGDR
Trigger: CCTATCACCATTTGGCAAGTTTAACATCAAAGGCCAAGATTCCATTAGACTACTGGACCATCTCTTTGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR-3UTR CAA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGCAACTCTAATTCAGTaGACTGCTGAAGGTCTTTTT +
Preference number: 3 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKATLIQ*TAEGLF
Trigger: AAAAAGACCTTCAGCAGTCAACTGAATTAGAGTTGC...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
3UTR TCA 72 bp TGCTTCAACACATTACGTTTAATACTTGAGTCTCTGTaGATCTTCGTGGAGGTTCTCCAGAAATGGACAAAA +
Preference number: 3 (lower is better)
Translates to: CFNTLRLILESL*IFVEVLQKWTK
Trigger: TTTTGTCCATTTCTGGAGAACCTCCACGAAGATTCACAGAGACTCAAGTATTAAACGTAATGTGTTGAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR-3UTR CAA 90 bp TTGATGTGTTCCATGATTCGATCTAGATCAGACTCAAAGAGTTCCTTTCCAAAACGATGTAACAACATATaGATGTTGAACCGGAATGAG +
Preference number: 3 (lower is better)
Translates to: LMCSMIRSRSDSKSSFPKRCNNI*MLNRNE
Trigger: CTCATTCCGGTTCAACATCAATATGTTGTTACATCG...TTTTGGAAAGGAACTCTTTGAGTCTGATCTAGATCGAATCATGGAACACATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000521052.5
3UTR TCA 72 bp TTCTTTAGGATAACCAACAATATTGTTGAATCCATATaGTTCTCTTGCTTTGGCCTCAGTGTACTGGGTTGT +
Preference number: 3 (lower is better)
Translates to: FFRITNNIVESI*FSCFGLSVLGC
Trigger: ACAACCCAGTACACTGAGGCCAAAGCAAGAGAATCATATGGATTCAACAATATTGTTGGTTATCCTAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR GCA 90 bp ACAAGAACACGATTCACCCTAATAAGGCCTGATGGCCCATCTGCTCACCCAGCCAGGCCCCGCAGCAGCTaGGCGCCGGGACGGAGCATG +
Preference number: 4 (lower is better)
Translates to: TRTRFTLIRPDGPSAHPARPRSS*APGRSM
Trigger: CATGCTCCGTCCCGGCGCGCAGCTGCTGCGGGGCCT...GGCTGGGTGAGCAGATGGGCCATCAGGCCTTATTAGGGTGAATCGTGTTCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR GCA 90 bp GGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCGGAAGCAAGGGCCACTaGGCCGTCTCCCTTTGTGAT +
Preference number: 4 (lower is better)
Translates to: GEGGWNNSKTEGSKGHCAGSKGH*AVSLCD
Trigger: ATCACAAAGGGAGACGGCGCAGTGGCCCTTGCTTCC...GGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR GCA 90 bp ATCTACCCTTACAGGGGTGGTAGCAAGTCTGATACTACCTGGCTGATGGAATCCAGGCCCCGCAGCAGCTaGGCGCCGGGACGGAGCATG +
Preference number: 4 (lower is better)
Translates to: IYPYRGGSKSDTTWLMESRPRSS*APGRSM
Trigger: CATGCTCCGTCCCGGCGCGCAGCTGCTGCGGGGCCT...GGATTCCATCAGCCAGGTAGTATCAGACTTGCTACCACCCCTGTAAGGGTAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524206.1
3UTR CAA 72 bp GTGGCTCTACGGAGCACTTCCCACAAGATGGCAGTGTaGTATGCGGCTGGAGAGCCCTCCACTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: VALRSTSHKMAV*YAAGEPSTCGR
Trigger: CCTTCCGCAAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGAAGTGCTCCGTAGAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp TTCCTTTCCAAAACCTGGAGGAACTCCATTGGTGACCCAGGAGTCCTGAACTTTCGCCGGGACGGAGCATaGCTAGGCCGAGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: FLSKTWRNSIGDPGVLNFRRDGA*LGRGRG
Trigger: CCCTCGGCCTCGGCCTAGTCATGCTCCGTCCCGGCG...AAAGTTCAGGACTCCTGGGTCACCAATGGAGTTCCTCCAGGTTTTGGAAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521052.5
CDS-3UTR TCA 90 bp GGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCGAGGAACTCCATTGGTaGCCCAGGAGTCCTGAACTT +
Preference number: 4 (lower is better)
Translates to: GEGGWNNSKTEGSKGHCAEELHW*PRSPEL
Trigger: AAGTTCAGGACTCCTGGGTCACCAATGGAGTTCCTC...GGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp GGAGCACTTCCCACAAGATGGCAGTGTTGTATGCGGCTGGAGAGCCCTCCACTTAGCCCACTGACTCGTTaGGTCGGCCTCCCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: GALPTRWQCCMRLESPPLSPLTR*VGLPAN
Trigger: GTTTGCTGGGAGGCCGACTCAACGAGTCAGTGGGCT...AAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGAAGTGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp GGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCAAACTTGGCCTGTACTaGGTGTCCTGGCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: GEGGWNNSKTEGSKGHCAKLGLY*VSWPGL
Trigger: CAAACCAGGCCAGGACACTCAGTACAGGCCAAGTTT...GGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CCA 90 bp GGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCTGCTCCCAGCCAGCATaGAACCCCATGGAACACTTA +
Preference number: 4 (lower is better)
Translates to: GEGGWNNSKTEGSKGHCACSQPA*NPMEHL
Trigger: TAAGTGTTCCATGGGGTTCCATGCTGGCTGGGAGCA...GGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CCA 90 bp GCCTGTACTGAGTGTCCTGGCCTGGTTTGTAGAACCAGTGCGGCTGCTCCCAGCCTGAGTGTCCTGGCCTaGTTTGTAGAACCAGTGCGG +
Preference number: 4 (lower is better)
Translates to: ACTECPGLVCRTSAAAPSLSVLA*FVEPVR
Trigger: CCGCACTGGTTCTACAAACCAGGCCAGGACACTCAG...GCTGGGAGCAGCCGCACTGGTTCTACAAACCAGGCCAGGACACTCAGTACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp GGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCGCACTTCCCACAAGATaGCAGTGTTGTATGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GEGGWNNSKTEGSKGHCAALPTR*QCCMRL
Trigger: CAGCCGCATACAACACTGCCATCTTGTGGGAAGTGC...GGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp GGAGCACTTCCCACAAGATGGCAGTGTTGTATGCGGCTGGAGAGCCCTCCACTTCTAACCCCCAGGCTCTaGAGGCTTTCTCCAGGCGTA +
Preference number: 4 (lower is better)
Translates to: GALPTRWQCCMRLESPPLLTPRL*RLSPGV
Trigger: TACGCCTGGAGAAAGCCTTCAGAGCCTGGGGGTTAG...AAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGAAGTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR GCA 90 bp AGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCTGAAGGACCTTTCTTaGCTGTGGCCCAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: SRGRRLEQLQDGRKQGPLLKDLS*LWPSNS
Trigger: GGAGTTGCTGGGCCACAGGCAAGAAAGGTCCTTCAG...CAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp AGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGTCCCCAGGAGATTGGTaGGAAACAGTCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SRGRRLEQLQDGRKQGPLSPGDW*ETVSSA
Trigger: TGCTGAGCTGACTGTTTCTCACCAATCTCCTGGGGA...CAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp CATAAGCCAACAGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCCACCCTAATAAGGCCTaGTGGCCCATCTGCTCACCC +
Preference number: 4 (lower is better)
Translates to: HKPTAGEGGWNNSKTEGSHPNKA*WPICSP
Trigger: GGGTGAGCAGATGGGCCATCAGGCCTTATTAGGGTG...GCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR GCA 90 bp AGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGGGAGAGCCCTCCACTTaGGGAAGGGTTATCTTCACA +
Preference number: 4 (lower is better)
Translates to: SRGRRLEQLQDGRKQGPLGEPST*GRVIFT
Trigger: TGTGAAGATAACCCTTCCGCAAGTGGAGGGCTCTCC...CAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR GCA 90 bp AAGCCAACAGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGATGGCAGTGTTGTATaGGGCTGGAGAGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KPTAGEGGWNNSKTEGSKDGSVV*GWRALH
Trigger: GTGGAGGGCTCTCCAGCCGCATACAACACTGCCATC...CTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CCA 90 bp TTGGCCTGTACTGAGTGTCCTGGCCTGGTTTGTAGAACCAGTGCGGCTGCTCCCTGCTCCCAGCCAGCATaGAACCCCATGGAACACTTA +
Preference number: 4 (lower is better)
Translates to: LACTECPGLVCRTSAAAPCSQPA*NPMEHL
Trigger: TAAGTGTTCCATGGGGTTCCATGCTGGCTGGGAGCA...GGGAGCAGCCGCACTGGTTCTACAAACCAGGCCAGGACACTCAGTACAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp CGGCTGCTCCCAGCCAGCATGGAACCCCATGGAACACTTAGACTCCAGCCTTTGCCTACCCCACCAGCGTaGATTATGCCATATTGCGTG +
Preference number: 4 (lower is better)
Translates to: RLLPASMEPHGTLRLQPLPTPPA*IMPYCV
Trigger: CACGCAATATGGCATAATCCACGCTGGTGGGGTAGG...CAAAGGCTGGAGTCTAAGTGTTCCATGGGGTTCCATGCTGGCTGGGAGCAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517853.5
CDS-3UTR TCA 90 bp CCGAGCCCACAGGCTCAAACCAGTTTGTGCGGCGAAAACTTGGCCTGTACTGAGGCAGGATCCAGTCACTaGGATATTTCCCTACCCCAC +
Preference number: 4 (lower is better)
Translates to: PSPQAQTSLCGENLACTEAGSSH*DISLPH
Trigger: GTGGGGTAGGGAAATATCTCAGTGACTGGATCCTGC...CTCAGTACAGGCCAAGTTTTCGCCGCACAAACTGGTTTGAGCCTGTGGGCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp CTTCCCACAAGATGGCAGTGTTGTATGCGGCTGGAGAGCCCTCCACTTGCGGAAGCAGGATCCAGTCACTaGGATATTTCCCTACCCCAC +
Preference number: 4 (lower is better)
Translates to: LPTRWQCCMRLESPPLAEAGSSH*DISLPH
Trigger: GTGGGGTAGGGAAATATCTCAGTGACTGGATCCTGC...TTCCGCAAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp CATAAGCCAACAGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCTTTGATAGAGCCCACTaGCTCGTTGAGTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HKPTAGEGGWNNSKTEGSFDRAH*LVESAS
Trigger: GGAGGCCGACTCAACGAGTCAGTGGGCTCTATCAAA...GCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp GAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCGTCTCCCATACTTGAGTCTCTGTaGATCTTCGTGGAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: EAGTTPRRKEARATAPSPILESL*IFVEVL
Trigger: GAGAACCTCCACGAAGATTCACAGAGACTCAAGTAT...GGGAGACGGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR GCA 90 bp CTTGACTTTCATATGGACCAAACAAAAGCCCATCCCTTTCCTGTCGGAGATAATAGGCCCCGCAGCAGCTaGGCGCCGGGACGGAGCATG +
Preference number: 4 (lower is better)
Translates to: LDFHMDQTKAHPFPVGDNRPRSS*APGRSM
Trigger: CATGCTCCGTCCCGGCGCGCAGCTGCTGCGGGGCCT...ATTATCTCCGACAGGAAAGGGATGGGCTTTTGTTTGGTCCATATGAAAGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000521052.5
CDS-3UTR GCA 90 bp CGGCTGCTCCCAGCCAGCATGGAACCCCATGGAACACTTAGACTCCAGCCTTTGTCCCTCCTCCTGGCCTaGATTCATGATAGCGTCATA +
Preference number: 4 (lower is better)
Translates to: RLLPASMEPHGTLRLQPLSLLLA*IHDSVI
Trigger: TATGACGCTATCATGAATGCAGGCCAGGAGGAGGGA...CAAAGGCTGGAGTCTAAGTGTTCCATGGGGTTCCATGCTGGCTGGGAGCAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR GCA 90 bp TTGGCCTGTACTGAGTGTCCTGGCCTGGTTTGTAGAACCAGTGCGGCTGCTCCCTCCCTCCTCCTGGCCTaGATTCATGATAGCGTCATA +
Preference number: 4 (lower is better)
Translates to: LACTECPGLVCRTSAAAPSLLLA*IHDSVI
Trigger: TATGACGCTATCATGAATGCAGGCCAGGAGGAGGGA...GGGAGCAGCCGCACTGGTTCTACAAACCAGGCCAGGACACTCAGTACAGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR GCA 90 bp TGCGGCTGCTCCCAGCCAGCATGGAACCCCATGGAACACTTAGACTCCAGCCTTTTATGCCATATTGCGTaGCAGGTAGATCCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: CGCSQPAWNPMEHLDSSLLCHIA*QVDPAV
Trigger: CACGGCTGGATCTACCTGGCACGCAATATGGCATAA...AAGGCTGGAGTCTAAGTGTTCCATGGGGTTCCATGCTGGCTGGGAGCAGCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517853.5
CDS-3UTR CCA 90 bp GGAGCACTTCCCACAAGATGGCAGTGTTGTATGCGGCTGGAGAGCCCTCCACTTTCGATTCCCTCCTCCTaGCCTGCATTCATGATAGCG +
Preference number: 4 (lower is better)
Translates to: GALPTRWQCCMRLESPPLSIPSS*PAFMIA
Trigger: CGCTATCATGAATGCAGGCCAGGAGGAGGGAATCGA...AAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGAAGTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
3UTR CAA 72 bp AGCATGGAACCCCATGGAACACTTAGACTCCAGCCTTaGATAGAGCCCACTGACTCGTTGAGTCGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SMEPHGTLRLQP*IEPTDSLSRPP
Trigger: GGGAGGCCGACTCAACGAGTCAGTGGGCTCTATCAAAGGCTGGAGTCTAAGTGTTCCATGGGGTTCCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp CTTCCCACAAGATGGCAGTGTTGTATGCGGCTGGAGAGCCCTCCACTTGCGGAACTGTCGGAGATAATATaGTCCTTCCAGGTCACGGAG +
Preference number: 4 (lower is better)
Translates to: LPTRWQCCMRLESPPLAELSEII*SFQVTE
Trigger: CTCCGTGACCTGGAAGGATCATATTATCTCCGACAG...TTCCGCAAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp TCGATTCCCTCCTCCTGGCCTGCATTCATGATAGCGTCATACAGCGCCACAGAATTTGATAGAGCCCACTaGCTCGTTGAGTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SIPSSWPAFMIASYSATEFDRAH*LVESAS
Trigger: GGAGGCCGACTCAACGAGTCAGTGGGCTCTATCAAA...TTCTGTGGCGCTGTATGACGCTATCATGAATGCAGGCCAGGAGGAGGGAATCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp GGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCCTTTTCCCTACTTGCTaGCAGGTTTTGACAAGAACA +
Preference number: 4 (lower is better)
Translates to: GEGGWNNSKTEGSKGHCALFPTC*QVLTRT
Trigger: TGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAAAG...GGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR GCA 90 bp GAGCCCAAAATCCTGACCAGTTTCTTCTTCCAGTTTCTCATAAAGTTTGATGCTAGGCCCCGCAGCAGCTaGGCGCCGGGACGGAGCATG +
Preference number: 4 (lower is better)
Translates to: EPKILTSFFFQFLIKFDARPRSS*APGRSM
Trigger: CATGCTCCGTCCCGGCGCGCAGCTGCTGCGGGGCCT...AGCATCAAACTTTATGAGAAACTGGAAGAAGAAACTGGTCAGGATTTTGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521052.5
CDS-3UTR GCA 90 bp ACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCGTCTCCCTTTGTGATGGCTCAAACCAGTTTGTaGGGCGAAAACTTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TTPRRKEARATAPSPFVMAQTSL*GENLAC
Trigger: ACAGGCCAAGTTTTCGCCGCACAAACTGGTTTGAGC...CATCACAAAGGGAGACGGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CCA 90 bp GAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCGTCTCCCATGTTCCATCTGACCTaGCTTTCAGAGAAGTTACTG +
Preference number: 4 (lower is better)
Translates to: EAGTTPRRKEARATAPSPMFHLT*LSEKLL
Trigger: CAGTAACTTCTCTGAAAGCCAGGTCAGATGGAACAT...GGGAGACGGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CCA 90 bp GAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCGTCTCCCCATACACTCGACCCTTaGGTGTTAACATGTGACTTA +
Preference number: 4 (lower is better)
Translates to: EAGTTPRRKEARATAPSPHTLDP*VLTCDL
Trigger: TAAGTCACATGTTAACACCCAAGGGTCGAGTGTATG...GGGAGACGGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CCA 90 bp CATAAGCCAACAGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCGACCTTTCTTGCCTGTaGCCCAGCAACTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: HKPTAGEGGWNNSKTEGSDLSCL*PSNSKN
Trigger: GTTCTTGGAGTTGCTGGGCCACAGGCAAGAAAGGTC...GCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CCA 90 bp TCACATAAGCCAACAGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGACAAGGCTTCCTGAAGTaGCTCTACGGAGCACTTCCC +
Preference number: 4 (lower is better)
Translates to: SHKPTAGEGGWNNSKTEGQGFLK*LYGALP
Trigger: GGGAAGTGCTCCGTAGAGCCACTTCAGGAAGCCTTG...TCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTTATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGCGCCGGGACGGAGCATaGCTAGGCCGAGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKRRDGA*LGRGRG
Trigger: CCCTCGGCCTCGGCCTAGTCATGCTCCGTCCCGGCG...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp TCCTCCTGGCCTGCATTCATGATAGCGTCATACAGCGCCACAGAATCTTCTCTTCACCCTAATAAGGCCTaGTGGCCCATCTGCTCACCC +
Preference number: 4 (lower is better)
Translates to: SSWPAFMIASYSATESSLHPNKA*WPICSP
Trigger: GGGTGAGCAGATGGGCCATCAGGCCTTATTAGGGTG...AAGAGAAGATTCTGTGGCGCTGTATGACGCTATCATGAATGCAGGCCAGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR GCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGAGGCCCCGCAGCAGCTaGGCGCCGGGACGGAGCATG +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKRPRSS*APGRSM
Trigger: CATGCTCCGTCCCGGCGCGCAGCTGCTGCGGGGCCT...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR GCA 90 bp GGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCATTCACAATTCTATTTaGTCTCATAGACCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GEGGWNNSKTEGSKGHCAIHNSI*SHRPLW
Trigger: CCACAGGGGTCTATGAGAGCAAATAGAATTGTGAAT...GGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR GCA 90 bp GGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCACGAGCCCAAAATCCTaGAGCATTCACAATTCTATT +
Preference number: 4 (lower is better)
Translates to: GEGGWNNSKTEGSKGHCATSPKS*SIHNSI
Trigger: AATAGAATTGTGAATGCTGCAGGATTTTGGGCTCGT...GGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR GCA 90 bp ACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCGTCTCCCTTTGTGATGAAAGGAGGTTCTCCATaGAGGATCCAGTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: TTPRRKEARATAPSPFVMKGGSP*RIQSLR
Trigger: TCTCAGTGACTGGATCCTGCATGGAGAACCTCCTTT...CATCACAAAGGGAGACGGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR GCA 90 bp CCTGTCGGAGATAATATGATCCTTCCAGGTCACGGAGCACAGGCAGTTCTCGTTAGCCCAAAATCTGCGTaGCAGGTAGATCCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: PVGDNMILPGHGAQAVLVSPKSA*QVDPAV
Trigger: CACGGCTGGATCTACCTGGCACGCAGATTTTGGGCT...AACGAGAACTGCCTGTGCTCCGTGACCTGGAAGGATCATATTATCTCCGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR CCA 90 bp GGAGCACTTCCCACAAGATGGCAGTGTTGTATGCGGCTGGAGAGCCCTCCACTTTTGGCCTCAGTGTACTaGGTTGTTGTCCATTTGCCA +
Preference number: 4 (lower is better)
Translates to: GALPTRWQCCMRLESPPLLASVY*VVVHLP
Trigger: TGGCAAATGGACAACAACCCAGTACACTGAGGCCAA...AAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGAAGTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CCA 90 bp CCCTCCTCCTGGCCTGCATTCATGATAGCGTCATACAGCGCCACAGAATCTTCTTGTGCGGCGAAAACTTaGCCTGTACTGAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PSSWPAFMIASYSATESSCAAKT*PVLSVL
Trigger: CAGGACACTCAGTACAGGCCAAGTTTTCGCCGCACA...AGAAGATTCTGTGGCGCTGTATGACGCTATCATGAATGCAGGCCAGGAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp TCGATTCCCTCCTCCTGGCCTGCATTCATGATAGCGTCATACAGCGCCACAGAATCGATTCCCTCCTCCTaGCCTGCATTCATGATAGCG +
Preference number: 4 (lower is better)
Translates to: SIPSSWPAFMIASYSATESIPSS*PAFMIA
Trigger: CGCTATCATGAATGCAGGCCAGGAGGAGGGAATCGA...TTCTGTGGCGCTGTATGACGCTATCATGAATGCAGGCCAGGAGGAGGGAATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp TATACTCCGAGCCCACAGGCTCAAACCAGTTTGTGCGGCGAAAACTTGGCCTGTTCGATTCCCTCCTCCTaGCCTGCATTCATGATAGCG +
Preference number: 4 (lower is better)
Translates to: YTPSPQAQTSLCGENLACSIPSS*PAFMIA
Trigger: CGCTATCATGAATGCAGGCCAGGAGGAGGGAATCGA...ACAGGCCAAGTTTTCGCCGCACAAACTGGTTTGAGCCTGTGGGCTCGGAGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR CAA 72 bp CTTAGACTCCAGCCTTTGATAGAGCCCACTGACTCGTaGAGTCGGCCTCCCAGCAAACCGTTCTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: LRLQPLIEPTDS*SRPPSKPFFFR
Trigger: CCTAAAGAAGAACGGTTTGCTGGGAGGCCGACTCAACGAGTCAGTGGGCTCTATCAAAGGCTGGAGTCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR CAA 72 bp CCTGTTTATACTCCGAGCCCACAGGCTCAAACCAGTTaGTGCGGCGAAAACTTGGCCTGTACTGAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PVYTPSPQAQTS*CGENLACTECP
Trigger: AGGACACTCAGTACAGGCCAAGTTTTCGCCGCACAAACTGGTTTGAGCCTGTGGGCTCGGAGTATAAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp TCACATAAGCCAACAGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAGTCCCATGTTCCATCTaGCCTGGCTTTCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: SHKPTAGEGGWNNSKTEGVPCSI*PGFQRS
Trigger: ACTTCTCTGAAAGCCAGGTCAGATGGAACATGGGAC...TCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTTATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp GGTGGTAGCAAGTCTGATACTACCTGGCTGATGGAATCCCACCACCTGACCAGTGTCCCATGTTCCATCTaGCCTGGCTTTCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: GGSKSDTTWLMESHHLTSVPCSI*PGFQRS
Trigger: ACTTCTCTGAAAGCCAGGTCAGATGGAACATGGGAC...ACTGGTCAGGTGGTGGGATTCCATCAGCCAGGTAGTATCAGACTTGCTACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524206.1
CDS-3UTR TCA 90 bp CATCCCTTTCCTGTCGGAGATAATATGATCCTTCCAGGTCACGGAGCACAGGCAGAGGAACTCCATTGGTaGCCCAGGAGTCCTGAACTT +
Preference number: 4 (lower is better)
Translates to: HPFPVGDNMILPGHGAQAEELHW*PRSPEL
Trigger: AAGTTCAGGACTCCTGGGTCACCAATGGAGTTCCTC...TGCCTGTGCTCCGTGACCTGGAAGGATCATATTATCTCCGACAGGAAAGGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000521052.5
CDS-3UTR TCA 90 bp ACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCGTCTCCCTTTGTGATGCAGGTTCATGAGATCTaGGAGCCATCAGGAGTATAT +
Preference number: 4 (lower is better)
Translates to: TTPRRKEARATAPSPFVMQVHEI*EPSGVY
Trigger: ATATACTCCTGATGGCTCTCAGATCTCATGAACCTG...CATCACAAAGGGAGACGGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp CATAAGCCAACAGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCTTGTTTCCAGGTTCATaGGATCTGAGAGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: HKPTAGEGGWNNSKTEGSLFPGS*DLRAIR
Trigger: CCTGATGGCTCTCAGATCTCATGAACCTGGAAACAA...GCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CCA 90 bp CTTCCCACAAGATGGCAGTGTTGTATGCGGCTGGAGAGCCCTCCACTTGCGGAATTCCTTTCCAAAACCTaGAGGAACTCCATTGGTGAC +
Preference number: 4 (lower is better)
Translates to: LPTRWQCCMRLESPPLAEFLSKT*RNSIGD
Trigger: GTCACCAATGGAGTTCCTCCAGGTTTTGGAAAGGAA...TTCCGCAAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CCA 90 bp ACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCGTCTCCCTTTGTGATGATGATTCTCTTGCTTTaGCCTCAGTGTACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: TTPRRKEARATAPSPFVMMILLL*PQCTGL
Trigger: CAACCCAGTACACTGAGGCCAAAGCAAGAGAATCAT...CATCACAAAGGGAGACGGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CCA 90 bp TGCATAACCTGTTTATACTCCGAGCCCACAGGCTCAAACCAGTTTGTGCGGCGAGACCTTTCTTGCCTGTaGCCCAGCAACTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: CITCLYSEPTGSNQFVRRDLSCL*PSNSKN
Trigger: GTTCTTGGAGTTGCTGGGCCACAGGCAAGAAAGGTC...TCGCCGCACAAACTGGTTTGAGCCTGTGGGCTCGGAGTATAAACAGGTTATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp CTTCCCACAAGATGGCAGTGTTGTATGCGGCTGGAGAGCCCTCCACTTGCGGAATTTTTACCGCAGCTTTaGTCAAGGCTTCCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: LPTRWQCCMRLESPPLAEFLPQL*SRLPEV
Trigger: CACTTCAGGAAGCCTTGACCAAAGCTGCGGTAAAAA...TTCCGCAAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp GCTCAAACCAGTTTGTGCGGCGAAAACTTGGCCTGTACTGAGTGTCCTGGCCTGGATGTTGAACCGGAATaGGAGGATGTTCTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: AQTSLCGENLACTECPGLDVEPE*EDVLVQ
Trigger: TTGGACTAGAACATCCTCTCATTCCGGTTCAACATC...CAGGCCAGGACACTCAGTACAGGCCAAGTTTTCGCCGCACAAACTGGTTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR TCA 90 bp GATGGCCCATCTGCTCACCCAGCCATTTTCCTCCTTAAAATGGGCAAAGCAGCTCTGTCGGAGATAATATaGTCCTTCCAGGTCACGGAG +
Preference number: 4 (lower is better)
Translates to: DGPSAHPAIFLLKMGKAALSEII*SFQVTE
Trigger: CTCCGTGACCTGGAAGGATCATATTATCTCCGACAG...AGCTGCTTTGCCCATTTTAAGGAGGAAAATGGCTGGGTGAGCAGATGGGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR TCA 90 bp CAGTCAGCTCAGCATACACTCGACCCTTGGGTGTTAACATGTGACTTATATTTGAGCCCACTGACTCGTTaGGTCGGCCTCCCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: QSAQHTLDPWVLTCDLYLSPLTR*VGLPAN
Trigger: GTTTGCTGGGAGGCCGACTCAACGAGTCAGTGGGCT...CAAATATAAGTCACATGTTAACACCCAAGGGTCGAGTGTATGCTGAGCTGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp TTTCCCTACTTGCTGACAGGTTTTGACAAGAACACGATTCACCCTAATAAGGCCAGCCCACTGACTCGTTaGGTCGGCCTCCCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: FPYLLTGFDKNTIHPNKASPLTR*VGLPAN
Trigger: GTTTGCTGGGAGGCCGACTCAACGAGTCAGTGGGCT...GGCCTTATTAGGGTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp GACTCGTTGAGTCGGCCTCCCAGCAAACCGTTCTTCTTTAGGATAACCAACAATTTTGATAGAGCCCACTaGCTCGTTGAGTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: DSLSRPPSKPFFFRITNNFDRAH*LVESAS
Trigger: GGAGGCCGACTCAACGAGTCAGTGGGCTCTATCAAA...ATTGTTGGTTATCCTAAAGAAGAACGGTTTGCTGGGAGGCCGACTCAACGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp CCAAAATTGTCGATTCCCTCCTCCTGGCCTGCATTCATGATAGCGTCATACAGCTCCCCAGGAGATTGGTaGGAAACAGTCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PKLSIPSSWPAFMIASYSSPGDW*ETVSSA
Trigger: TGCTGAGCTGACTGTTTCTCACCAATCTCCTGGGGA...GCTGTATGACGCTATCATGAATGCAGGCCAGGAGGAGGGAATCGACAATTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp CTTCCCACAAGATGGCAGTGTTGTATGCGGCTGGAGAGCCCTCCACTTGCGGAAATCCATCTAAGATCATaGAGTTCTGATCCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LPTRWQCCMRLESPPLAEIHLRS*SSDPEP
Trigger: TGGCTCTGGATCAGAACTTCATGATCTTAGATGGAT...TTCCGCAAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp CTTCCCACAAGATGGCAGTGTTGTATGCGGCTGGAGAGCCCTCCACTTGCGGAATTGAGAACAATGATATaGGTCGTTTCAGGTGAAGCG +
Preference number: 4 (lower is better)
Translates to: LPTRWQCCMRLESPPLAELRTMI*VVSGEA
Trigger: CGCTTCACCTGAAACGACTCATATCATTGTTCTCAA...TTCCGCAAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR GCA 90 bp CCCTCCTCCTGGCCTGCATTCATGATAGCGTCATACAGCGCCACAGAATCTTCTCACATCTTTCATCCCTaGTTTGGCCAGGTGATAAGC +
Preference number: 4 (lower is better)
Translates to: PSSWPAFMIASYSATESSHIFHP*FGQVIS
Trigger: GCTTATCACCTGGCCAAAGCAGGGATGAAAGATGTG...AGAAGATTCTGTGGCGCTGTATGACGCTATCATGAATGCAGGCCAGGAGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR GCA 90 bp CCTTACAGGGGTGGTAGCAAGTCTGATACTACCTGGCTGATGGAATCCCACCACTACTGTTCTGTTGCATaGCAGCCAGTCCGAGTCATT +
Preference number: 4 (lower is better)
Translates to: PYRGGSKSDTTWLMESHHYCSVA*QPVRVI
Trigger: AATGACTCGGACTGGCTGGCATGCAACAGAACAGTA...GTGGTGGGATTCCATCAGCCAGGTAGTATCAGACTTGCTACCACCCCTGTAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524206.1
CDS-3UTR CCA 90 bp CCAAAATTGTCGATTCCCTCCTCCTGGCCTGCATTCATGATAGCGTCATACAGCTGCTCCCAGCCAGCATaGAACCCCATGGAACACTTA +
Preference number: 4 (lower is better)
Translates to: PKLSIPSSWPAFMIASYSCSQPA*NPMEHL
Trigger: TAAGTGTTCCATGGGGTTCCATGCTGGCTGGGAGCA...GCTGTATGACGCTATCATGAATGCAGGCCAGGAGGAGGGAATCGACAATTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp GAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCGTCTCCCAGTCTAATGGAATCTTaGCCTTTGATGTTAAACTTG +
Preference number: 4 (lower is better)
Translates to: EAGTTPRRKEARATAPSPSLMES*PLMLNL
Trigger: CAAGTTTAACATCAAAGGCCAAGATTCCATTAGACT...GGGAGACGGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp TTTGCTCTCATAGACCCCTGTGGTGTTTCAACGTCCCATGTTCCATCTGACCTGTGGAATCCCACCACCTaGCCAGTTTCTTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: FALIDPCGVSTSHVPSDLWNPTT*PVSSSS
Trigger: ACTGGAAGAAGAAACTGGTCAGGTGGTGGGATTCCA...CAGGTCAGATGGAACATGGGACGTTGAAACACCACAGGGGTCTATGAGAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524206.1
CDS-3UTR TCA 90 bp CCTGTCGGAGATAATATGATCCTTCCAGGTCACGGAGCACAGGCAGTTCTCGTTTCAGAGGTCAGTTTCTaGAGGACCTTTCTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: PVGDNMILPGHGAQAVLVSEVSF*RTFLAC
Trigger: ACAGGCAAGAAAGGTCCTTCAGAAACTGACCTCTGA...AACGAGAACTGCCTGTGCTCCGTGACCTGGAAGGATCATATTATCTCCGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR TCA 90 bp CGGCTGCTCCCAGCCAGCATGGAACCCCATGGAACACTTAGACTCCAGCCTTTGGCAAAGCAGCTATTCTaGTCCTTATTTAACTTCACA +
Preference number: 4 (lower is better)
Translates to: RLLPASMEPHGTLRLQPLAKQLF*SLFNFT
Trigger: TGTGAAGTTAAATAAGGATCAGAATAGCTGCTTTGC...CAAAGGCTGGAGTCTAAGTGTTCCATGGGGTTCCATGCTGGCTGGGAGCAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp CAGTCAGCTCAGCATACACTCGACCCTTGGGTGTTAACATGTGACTTATATTTGCACCCTAATAAGGCCTaGTGGCCCATCTGCTCACCC +
Preference number: 4 (lower is better)
Translates to: QSAQHTLDPWVLTCDLYLHPNKA*WPICSP
Trigger: GGGTGAGCAGATGGGCCATCAGGCCTTATTAGGGTG...CAAATATAAGTCACATGTTAACACCCAAGGGTCGAGTGTATGCTGAGCTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp TGCATAACCTGTTTATACTCCGAGCCCACAGGCTCAAACCAGTTTGTGCGGCGACTTGCTGACAGGTTTTaGCAAGAACACGATTCACCC +
Preference number: 4 (lower is better)
Translates to: CITCLYSEPTGSNQFVRRLADRF*QEHDSP
Trigger: GGGTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAG...TCGCCGCACAAACTGGTTTGAGCCTGTGGGCTCGGAGTATAAACAGGTTATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR GCA 90 bp ATCTACCCTTACAGGGGTGGTAGCAAGTCTGATACTACCTGGCTGATGGAATCCGAGATACTGTTCTGTTaGATGCCAGCCAGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: IYPYRGGSKSDTTWLMESEILFC*MPASPS
Trigger: ACTCGGACTGGCTGGCATGCAACAGAACAGTATCTC...GGATTCCATCAGCCAGGTAGTATCAGACTTGCTACCACCCCTGTAAGGGTAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524206.1
CDS-3UTR CCA 90 bp GGAGCACTTCCCACAAGATGGCAGTGTTGTATGCGGCTGGAGAGCCCTCCACTTCTCTTGACTTTCATATaGACCAAACAAAAGCCCATC +
Preference number: 4 (lower is better)
Translates to: GALPTRWQCCMRLESPPLLLTFI*TKQKPI
Trigger: GATGGGCTTTTGTTTGGTCCATATGAAAGTCAAGAG...AAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGAAGTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CCA 90 bp AGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGTGTAAAACCCACCTTTaGAATGACATTTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: SRGRRLEQLQDGRKQGPLCKTHL*NDICKE
Trigger: CTCTTTGCAAATGTCATTCCAAAGGTGGGTTTTACA...CAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CCA 90 bp CACTGCGCCGTCTCCCTTTGTGATGAAAGAGTTCTTCAGTACTCCATTGTTCTTGCAGGGGAAGGAGGCTaGAACAACTCCAAGACGGAA +
Preference number: 4 (lower is better)
Translates to: HCAVSLCDERVLQYSIVLAGEGG*NNSKTE
Trigger: TTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGC...AAGAACAATGGAGTACTGAAGAACTCTTTCATCACAAAGGGAGACGGCGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp AAGCCAACAGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGATTGTTGAATCCATATaGTTCTCTTGCTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KPTAGEGGWNNSKTEGSKIVESI*FSCFGL
Trigger: GAGGCCAAAGCAAGAGAATCATATGGATTCAACAAT...CTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp CCAAAATTGTCGATTCCCTCCTCCTGGCCTGCATTCATGATAGCGTCATACAGCTCAGAGGTCAGTTTCTaGAGGACCTTTCTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: PKLSIPSSWPAFMIASYSSEVSF*RTFLAC
Trigger: ACAGGCAAGAAAGGTCCTTCAGAAACTGACCTCTGA...GCTGTATGACGCTATCATGAATGCAGGCCAGGAGGAGGGAATCGACAATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp CCATTTGCCATAGCGATTAGGATCCAATTCTATCAGATCAAAAGGAGGTTCTCCCTAACCCCCAGGCTCTaGAGGCTTTCTCCAGGCGTA +
Preference number: 4 (lower is better)
Translates to: PFAIAIRIQFYQIKRRFSLTPRL*RLSPGV
Trigger: TACGCCTGGAGAAAGCCTTCAGAGCCTGGGGGTTAG...GGAGAACCTCCTTTTGATCTGATAGAATTGGATCCTAATCGCTATGGCAAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCCATCCGTTGCCAAGGTaGGGCAGACCAGTCTTCGTT +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVHPLPR*GRPVFV
Trigger: AACGAAGACTGGTCTGCCTCACCTTGGCAACGGATG...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR GCA 90 bp GGAGCACTTCCCACAAGATGGCAGTGTTGTATGCGGCTGGAGAGCCCTCCACTTATATCCACCTTTGACTaGTTCTTCTTCAATCCATCT +
Preference number: 4 (lower is better)
Translates to: GALPTRWQCCMRLESPPLISTFD*FFFNPS
Trigger: AGATGGATTGAAGAAGAAGCAGTCAAAGGTGGATAT...AAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGAAGTGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR GCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCCTGAAGGACCTTTCTTaGCTGTGGCCCAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVLKDLS*LWPSNS
Trigger: GGAGTTGCTGGGCCACAGGCAAGAAAGGTCCTTCAG...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp TTCCTTTCCAAAACCTGGAGGAACTCCATTGGTGACCCAGGAGTCCTGAACTTTCTTTCATCCCTGCTTTaGCCAGGTGATAAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: FLSKTWRNSIGDPGVLNFLSSLL*PGDKPD
Trigger: GTCTGGCTTATCACCTGGCCAAAGCAGGGATGAAAG...AAAGTTCAGGACTCCTGGGTCACCAATGGAGTTCCTCCAGGTTTTGGAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR CCA 90 bp ATAGACCCCTGTGGTGTTTCAACGTCCCATGTTCCATCTGACCTGGCTTTCAGAAAGTCTGATACTACCTaGCTGATGGAATCCCACCAC +
Preference number: 4 (lower is better)
Translates to: IDPCGVSTSHVPSDLAFRKSDTT*LMESHH
Trigger: GTGGTGGGATTCCATCAGCCAGGTAGTATCAGACTT...TCTGAAAGCCAGGTCAGATGGAACATGGGACGTTGAAACACCACAGGGGTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524206.1
CDS-3UTR CCA 90 bp TTTGCTCTCATAGACCCCTGTGGTGTTTCAACGTCCCATGTTCCATCTGACCTGTCTCATAGACCCCTGTaGTGTTTCAACGTCCCATGT +
Preference number: 4 (lower is better)
Translates to: FALIDPCGVSTSHVPSDLSHRPL*CFNVPC
Trigger: ACATGGGACGTTGAAACACCACAGGGGTCTATGAGA...CAGGTCAGATGGAACATGGGACGTTGAAACACCACAGGGGTCTATGAGAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524206.1
CDS-3UTR CCA 90 bp ATTCATGGCATAGGTTCCAAAATTGTCGATTCCCTCCTCCTGGCCTGCATTCATTGTGCGGCGAAAACTTaGCCTGTACTGAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: IHGIGSKIVDSLLLACIHCAAKT*PVLSVL
Trigger: CAGGACACTCAGTACAGGCCAAGTTTTCGCCGCACA...ATGAATGCAGGCCAGGAGGAGGGAATCGACAATTTTGGAACCTATGCCATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp CGGCTGCTCCCAGCCAGCATGGAACCCCATGGAACACTTAGACTCCAGCCTTTGAGTCTAATGGAATCTTaGCCTTTGATGTTAAACTTG +
Preference number: 4 (lower is better)
Translates to: RLLPASMEPHGTLRLQPLSLMES*PLMLNL
Trigger: CAAGTTTAACATCAAAGGCCAAGATTCCATTAGACT...CAAAGGCTGGAGTCTAAGTGTTCCATGGGGTTCCATGCTGGCTGGGAGCAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp CCGAGCCCACAGGCTCAAACCAGTTTGTGCGGCGAAAACTTGGCCTGTACTGAGTGTAAAACCCACCTTTaGAATGACATTTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PSPQAQTSLCGENLACTECKTHL*NDICKE
Trigger: CTCTTTGCAAATGTCATTCCAAAGGTGGGTTTTACA...CTCAGTACAGGCCAAGTTTTCGCCGCACAAACTGGTTTGAGCCTGTGGGCTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp TCACATAAGCCAACAGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAGGCGTAAGGCATTCATaGCATAGGTTCCAAAATTGT +
Preference number: 4 (lower is better)
Translates to: SHKPTAGEGGWNNSKTEGGVRHS*HRFQNC
Trigger: ACAATTTTGGAACCTATGCCATGAATGCCTTACGCC...TCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCGCAGGATCCAGTCACTaGGATATTTCCCTACCCCAC +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVAGSSH*DISLPH
Trigger: GTGGGGTAGGGAAATATCTCAGTGACTGGATCCTGC...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGAGCCCACTGACTCGTTaGGTCGGCCTCCCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKSPLTR*VGLPAN
Trigger: GTTTGCTGGGAGGCCGACTCAACGAGTCAGTGGGCT...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCAAACTTGGCCTGTACTaGGTGTCCTGGCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVKLGLY*VSWPGL
Trigger: CAAACCAGGCCAGGACACTCAGTACAGGCCAAGTTT...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCTCCCCAGGAGATTGGTaGGAAACAGTCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVSPGDW*ETVSSA
Trigger: TGCTGAGCTGACTGTTTCTCACCAATCTCCTGGGGA...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp ATTCATGGCATAGGTTCCAAAATTGTCGATTCCCTCCTCCTGGCCTGCATTCATGAATCTTCTCTTCTGTaGTACAGCTCCCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: IHGIGSKIVDSLLLACIHESSLL*YSSQPS
Trigger: GCTGGGTTGGGAGCTGTATCACAGAAGAGAAGATTC...ATGAATGCAGGCCAGGAGGAGGGAATCGACAATTTTGGAACCTATGCCATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp TGTTCTTTTCCCTACTTGCTGACAGGTTTTGACAAGAACACGATTCACCCTAATCTAACCCCCAGGCTCTaGAGGCTTTCTCCAGGCGTA +
Preference number: 4 (lower is better)
Translates to: CSFPYLLTGFDKNTIHPNLTPRL*RLSPGV
Trigger: TACGCCTGGAGAAAGCCTTCAGAGCCTGGGGGTTAG...ATTAGGGTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAAAGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp CATAAGCCAACAGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCCTAAACAAAGGCTACTaGTTTTCCTCCCAAAAGTTA +
Preference number: 4 (lower is better)
Translates to: HKPTAGEGGWNNSKTEGSLNKGY*FSSQKL
Trigger: TAACTTTTGGGAGGAAAATCAGTAGCCTTTGTTTAG...GCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR GCA 90 bp CATGATAGCGTCATACAGCGCCACAGAATCTTCTCTTCTGTGATACAGCTCCCAAAAGGAGGTTCTCCATaGAGGATCCAGTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: HDSVIQRHRIFSSVIQLPKGGSP*RIQSLR
Trigger: TCTCAGTGACTGGATCCTGCATGGAGAACCTCCTTT...TGGGAGCTGTATCACAGAAGAGAAGATTCTGTGGCGCTGTATGACGCTATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR GCA 90 bp AAAACCTGGAGGAACTCCATTGGTGACCCAGGAGTCCTGAACTTTCATTTTCTCGCTCAAACCAGTTTGTaGGGCGAAAACTTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: KTWRNSIGDPGVLNFHFLAQTSL*GENLAC
Trigger: ACAGGCCAAGTTTTCGCCGCACAAACTGGTTTGAGC...GAGAAAATGAAAGTTCAGGACTCCTGGGTCACCAATGGAGTTCCTCCAGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR CCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCTGCTCCCAGCCAGCATaGAACCCCATGGAACACTTA +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVCSQPA*NPMEHL
Trigger: TAAGTGTTCCATGGGGTTCCATGCTGGCTGGGAGCA...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp CTCCATTGTTCTTTTCCCTACTTGCTGACAGGTTTTGACAAGAACACGATTCACCTGAGTGTCCTGGCCTaGTTTGTAGAACCAGTGCGG +
Preference number: 4 (lower is better)
Translates to: LHCSFPYLLTGFDKNTIHLSVLA*FVEPVR
Trigger: CCGCACTGGTTCTACAAACCAGGCCAGGACACTCAG...GTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAAAGAACAATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517853.5
ENST00000518477.5
ENST00000523732.1
CDS-3UTR CCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCGACCTTTCTTGCCTGTaGCCCAGCAACTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVDLSCL*PSNSKN
Trigger: GTTCTTGGAGTTGCTGGGCCACAGGCAAGAAAGGTC...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCTGGAATCCCACCACCTaGCCAGTTTCTTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVWNPTT*PVSSSS
Trigger: ACTGGAAGAAGAAACTGGTCAGGTGGTGGGATTCCA...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCGTCCCATGTTCCATCTaGCCTGGCTTTCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVVPCSI*PGFQRS
Trigger: ACTTCTCTGAAAGCCAGGTCAGATGGAACATGGGAC...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp CTTCCAGGTCACGGAGCACAGGCAGTTCTCGTTTCAAAGCTTTCACTTCAGATAGATGTTGAACCGGAATaGGAGGATGTTCTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: LPGHGAQAVLVSKLSLQIDVEPE*EDVLVQ
Trigger: TTGGACTAGAACATCCTCTCATTCCGGTTCAACATC...TATCTGAAGTGAAAGCTTTGAAACGAGAACTGCCTGTGCTCCGTGACCTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000521052.5
CDS-3UTR TCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCTTTGATAGAGCCCACTaGCTCGTTGAGTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISFDRAH*LVESAS
Trigger: GGAGGCCGACTCAACGAGTCAGTGGGCTCTATCAAA...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp CCATTTGCCATAGCGATTAGGATCCAATTCTATCAGATCAAAAGGAGGTTCTCCAAACTTGGCCTGTACTaGGTGTCCTGGCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: PFAIAIRIQFYQIKRRFSKLGLY*VSWPGL
Trigger: CAAACCAGGCCAGGACACTCAGTACAGGCCAAGTTT...GGAGAACCTCCTTTTGATCTGATAGAATTGGATCCTAATCGCTATGGCAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp TATCAGATCAAAAGGAGGTTCTCCATGCAGGATCCAGTCACTGAGATATTTCCCGAATCTTCTCTTCTGTaGTACAGCTCCCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: YQIKRRFSMQDPVTEIFPESSLL*YSSQPS
Trigger: GCTGGGTTGGGAGCTGTATCACAGAAGAGAAGATTC...GGGAAATATCTCAGTGACTGGATCCTGCATGGAGAACCTCCTTTTGATCTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR TCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGCTAACCCCCAGGCTCTaGAGGCTTTCTCCAGGCGTA +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKLTPRL*RLSPGV
Trigger: TACGCCTGGAGAAAGCCTTCAGAGCCTGGGGGTTAG...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp CACTGCGCCGTCTCCCTTTGTGATGAAAGAGTTCTTCAGTACTCCATTGTTCTTCTTGCTGACAGGTTTTaGCAAGAACACGATTCACCC +
Preference number: 4 (lower is better)
Translates to: HCAVSLCDERVLQYSIVLLADRF*QEHDSP
Trigger: GGGTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAG...AAGAACAATGGAGTACTGAAGAACTCTTTCATCACAAAGGGAGACGGCGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517853.5
ENST00000518477.5
ENST00000523732.1
CDS-3UTR GCA 90 bp ATACAGCTCCCAACCCAGCTCACCAGTATAAGATATCCTAATAGCAGTGACAGGCACATCTTTCATCCCTaGTTTGGCCAGGTGATAAGC +
Preference number: 4 (lower is better)
Translates to: IQLPTQLTSIRYPNSSDRHIFHP*FGQVIS
Trigger: GCTTATCACCTGGCCAAAGCAGGGATGAAAGATGTG...CCTGTCACTGCTATTAGGATATCTTATACTGGTGAGCTGGGTTGGGAGCTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR GCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCGTTAAACCTGCTGCGTaGCAGGTAGATCCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISVKPAA*QVDPAV
Trigger: CACGGCTGGATCTACCTGGCACGCAGCAGGTTTAAC...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR GCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCGCTCAAACCAGTTTGTaGGGCGAAAACTTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVAQTSL*GENLAC
Trigger: ACAGGCCAAGTTTTCGCCGCACAAACTGGTTTGAGC...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR GCA 90 bp GAACCCCATGGAACACTTAGACTCCAGCCTTTGATAGAGCCCACTGACTCGTTGGTTACCGCTACTCTTTaGATAACCTGTTTATACTCC +
Preference number: 4 (lower is better)
Translates to: EPHGTLRLQPLIEPTDSLVTATL*ITCLYS
Trigger: GGAGTATAAACAGGTTATGCAAAGAGTAGCGGTAAC...CAACGAGTCAGTGGGCTCTATCAAAGGCTGGAGTCTAAGTGTTCCATGGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR GCA 90 bp TTAAACTTGCCAAATGGTGATAGGTCAGTTACCGCTACTCTTTGCATAACCTGTCTGAAGGACCTTTCTTaGCTGTGGCCCAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: LNLPNGDRSVTATLCITCLKDLS*LWPSNS
Trigger: GGAGTTGCTGGGCCACAGGCAAGAAAGGTCCTTCAG...ACAGGTTATGCAAAGAGTAGCGGTAACTGACCTATCACCATTTGGCAAGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR GCA 90 bp ATGTTAAACTTGCCAAATGGTGATAGGTCAGTTACCGCTACTCTTTGCATAACCCTGAAGGACCTTTCTTaGCTGTGGCCCAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: MLNLPNGDRSVTATLCITLKDLS*LWPSNS
Trigger: GGAGTTGCTGGGCCACAGGCAAGAAAGGTCCTTCAG...GGTTATGCAAAGAGTAGCGGTAACTGACCTATCACCATTTGGCAAGTTTAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp CATCCCTTTCCTGTCGGAGATAATATGATCCTTCCAGGTCACGGAGCACAGGCACTCTTGACTTTCATATaGACCAAACAAAAGCCCATC +
Preference number: 4 (lower is better)
Translates to: HPFPVGDNMILPGHGAQALLTFI*TKQKPI
Trigger: GATGGGCTTTTGTTTGGTCCATATGAAAGTCAAGAG...TGCCTGTGCTCCGTGACCTGGAAGGATCATATTATCTCCGACAGGAAAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000521052.5
CDS-3UTR CCA 90 bp ACAAAAGCCCATCCCTTTCCTGTCGGAGATAATATGATCCTTCCAGGTCACGGATTCCTTTCCAAAACCTaGAGGAACTCCATTGGTGAC +
Preference number: 4 (lower is better)
Translates to: TKAHPFPVGDNMILPGHGFLSKT*RNSIGD
Trigger: GTCACCAATGGAGTTCCTCCAGGTTTTGGAAAGGAA...TCCGTGACCTGGAAGGATCATATTATCTCCGACAGGAAAGGGATGGGCTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000521052.5
CDS-3UTR CCA 90 bp AAAACCTGGAGGAACTCCATTGGTGACCCAGGAGTCCTGAACTTTCATTTTCTCTTGGCCTCAGTGTACTaGGTTGTTGTCCATTTGCCA +
Preference number: 4 (lower is better)
Translates to: KTWRNSIGDPGVLNFHFLLASVY*VVVHLP
Trigger: TGGCAAATGGACAACAACCCAGTACACTGAGGCCAA...GAGAAAATGAAAGTTCAGGACTCCTGGGTCACCAATGGAGTTCCTCCAGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR CCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCCTGAGTGTCCTGGCCTaGTTTGTAGAACCAGTGCGG +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISLSVLA*FVEPVR
Trigger: CCGCACTGGTTCTACAAACCAGGCCAGGACACTCAG...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp ACAAGAACACGATTCACCCTAATAAGGCCTGATGGCCCATCTGCTCACCCAGCCACATTTGCAAAGAGATaGTCCAGTAGTCTAATGGAA +
Preference number: 4 (lower is better)
Translates to: TRTRFTLIRPDGPSAHPATFAKR*SSSLME
Trigger: TTCCATTAGACTACTGGACCATCTCTTTGCAAATGT...GGCTGGGTGAGCAGATGGGCCATCAGGCCTTATTAGGGTGAATCGTGTTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp CTCAGTGTACTGGGTTGTTGTCCATTTGCCATAGCGATTAGGATCCAATTCTATGACCTTTCTTGCCTGTaGCCCAGCAACTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: LSVLGCCPFAIAIRIQFYDLSCL*PSNSKN
Trigger: GTTCTTGGAGTTGCTGGGCCACAGGCAAGAAAGGTC...ATAGAATTGGATCCTAATCGCTATGGCAAATGGACAACAACCCAGTACACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCGAGGAACTCCATTGGTaGCCCAGGAGTCCTGAACTT +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISEELHW*PRSPEL
Trigger: AAGTTCAGGACTCCTGGGTCACCAATGGAGTTCCTC...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp ATGTTAAACTTGCCAAATGGTGATAGGTCAGTTACCGCTACTCTTTGCATAACCAAACTTGGCCTGTACTaGGTGTCCTGGCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: MLNLPNGDRSVTATLCITKLGLY*VSWPGL
Trigger: CAAACCAGGCCAGGACACTCAGTACAGGCCAAGTTT...GGTTATGCAAAGAGTAGCGGTAACTGACCTATCACCATTTGGCAAGTTTAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp CATGATAGCGTCATACAGCGCCACAGAATCTTCTCTTCTGTGATACAGCTCCCAAACCCACCTTTGGAATaGCATTTGCAAAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: HDSVIQRHRIFSSVIQLPNPPLE*HLQRDG
Trigger: ACCATCTCTTTGCAAATGTCATTCCAAAGGTGGGTT...TGGGAGCTGTATCACAGAAGAGAAGATTCTGTGGCGCTGTATGACGCTATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp ATGTTAAACTTGCCAAATGGTGATAGGTCAGTTACCGCTACTCTTTGCATAACCTCCCCAGGAGATTGGTaGGAAACAGTCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: MLNLPNGDRSVTATLCITSPGDW*ETVSSA
Trigger: TGCTGAGCTGACTGTTTCTCACCAATCTCCTGGGGA...GGTTATGCAAAGAGTAGCGGTAACTGACCTATCACCATTTGGCAAGTTTAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCTCAGAGGTCAGTTTCTaGAGGACCTTTCTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVSEVSF*RTFLAC
Trigger: ACAGGCAAGAAAGGTCCTTCAGAAACTGACCTCTGA...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp GAAGGGTTATCTTCACAATTACGGCTAAGAACGTATCCCTACAGCTTTAGTTCCGAATCTTCTCTTCTGTaGTACAGCTCCCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: EGLSSQLRLRTYPYSFSSESSLL*YSSQPS
Trigger: GCTGGGTTGGGAGCTGTATCACAGAAGAGAAGATTC...GGAACTAAAGCTGTAGGGATACGTTCTTAGCCGTAATTGTGAAGATAACCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp TTTCCCTACTTGCTGACAGGTTTTGACAAGAACACGATTCACCCTAATAAGGCCCTTGCTGACAGGTTTTaGCAAGAACACGATTCACCC +
Preference number: 4 (lower is better)
Translates to: FPYLLTGFDKNTIHPNKALADRF*QEHDSP
Trigger: GGGTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAG...GGCCTTATTAGGGTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp CTCAGTGTACTGGGTTGTTGTCCATTTGCCATAGCGATTAGGATCCAATTCTATCTTTCATCCCTGCTTTaGCCAGGTGATAAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: LSVLGCCPFAIAIRIQFYLSSLL*PGDKPD
Trigger: GTCTGGCTTATCACCTGGCCAAAGCAGGGATGAAAG...ATAGAATTGGATCCTAATCGCTATGGCAAATGGACAACAACCCAGTACACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp GACTTTCATATGGACCAAACAAAAGCCCATCCCTTTCCTGTCGGAGATAATATGCCTACCCCACCAGCGTaGATTATGCCATATCCAAAG +
Preference number: 4 (lower is better)
Translates to: DFHMDQTKAHPFPVGDNMPTPPA*IMPYPK
Trigger: CTTTGGATATGGCATAATCCACGCTGGTGGGGTAGG...CATATTATCTCCGACAGGAAAGGGATGGGCTTTTGTTTGGTCCATATGAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR CCA 90 bp GAAGGGTTATCTTCACAATTACGGCTAAGAACGTATCCCTACAGCTTTAGTTCCCCTACCCCACCAGCGTaGATTATGCCATATCCAAAG +
Preference number: 4 (lower is better)
Translates to: EGLSSQLRLRTYPYSFSSPTPPA*IMPYPK
Trigger: CTTTGGATATGGCATAATCCACGCTGGTGGGGTAGG...GGAACTAAAGCTGTAGGGATACGTTCTTAGCCGTAATTGTGAAGATAACCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCTGTGCGGCGAAAACTTaGCCTGTACTGAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISCAAKT*PVLSVL
Trigger: CAGGACACTCAGTACAGGCCAAGTTTTCGCCGCACA...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCTCGATTCCCTCCTCCTaGCCTGCATTCATGATAGCG +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISSIPSS*PAFMIA
Trigger: CGCTATCATGAATGCAGGCCAGGAGGAGGGAATCGA...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp TTAGTTCCTGAAATATTATTTGTTTCCAGGTTCATGAGATCTGAGAGCCATCAGAGTGTTGTATGCGGCTaGAGAGCCCTCCACTTGCGG +
Preference number: 4 (lower is better)
Translates to: LVPEILFVSRFMRSESHQSVVCG*RALHLR
Trigger: CCGCAAGTGGAGGGCTCTCCAGCCGCATACAACACT...CTGATGGCTCTCAGATCTCATGAACCTGGAAACAAATAATATTTCAGGAACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CCA 90 bp CACTGCGCCGTCTCCCTTTGTGATGAAAGAGTTCTTCAGTACTCCATTGTTCTTCTCTGTGAATCTTCGTaGAGGTTCTCCAGAAATGGA +
Preference number: 4 (lower is better)
Translates to: HCAVSLCDERVLQYSIVLLCESS*RFSRNG
Trigger: TCCATTTCTGGAGAACCTCCACGAAGATTCACAGAG...AAGAACAATGGAGTACTGAAGAACTCTTTCATCACAAAGGGAGACGGCGCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp TTTGCAAAGAGATGGTCCAGTAGTCTAATGGAATCTTGGCCTTTGATGTTAAACGAGGAACTCCATTGGTaGCCCAGGAGTCCTGAACTT +
Preference number: 4 (lower is better)
Translates to: FAKRWSSSLMESWPLMLNEELHW*PRSPEL
Trigger: AAGTTCAGGACTCCTGGGTCACCAATGGAGTTCCTC...GTTTAACATCAAAGGCCAAGATTCCATTAGACTACTGGACCATCTCTTTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR TCA 90 bp ATTCATGGCATAGGTTCCAAAATTGTCGATTCCCTCCTCCTGGCCTGCATTCATATCCATCTAAGATCATaGAGTTCTGATCCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: IHGIGSKIVDSLLLACIHIHLRS*SSDPEP
Trigger: TGGCTCTGGATCAGAACTTCATGATCTTAGATGGAT...ATGAATGCAGGCCAGGAGGAGGGAATCGACAATTTTGGAACCTATGCCATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp AAAACCTGGAGGAACTCCATTGGTGACCCAGGAGTCCTGAACTTTCATTTTCTCCTTTTCCCTACTTGCTaGCAGGTTTTGACAAGAACA +
Preference number: 4 (lower is better)
Translates to: KTWRNSIGDPGVLNFHFLLFPTC*QVLTRT
Trigger: TGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAAAG...GAGAAAATGAAAGTTCAGGACTCCTGGGTCACCAATGGAGTTCCTCCAGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR TCA 90 bp GATGTTCTAGTCCAATCATTTTACCTACTTCACGAGCCCAAAATCCTGACCAGTACGAGCCCAAAATCCTaGCCAGTTTCTTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: DVLVQSFYLLHEPKILTSTSPKS*PVSSSS
Trigger: ACTGGAAGAAGAAACTGGTCAGGATTTTGGGCTCGT...ACTGGTCAGGATTTTGGGCTCGTGAAGTAGGTAAAATGATTGGACTAGAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521052.5
CDS-3UTR TCA 90 bp TTAGTTCCTGAAATATTATTTGTTTCCAGGTTCATGAGATCTGAGAGCCATCAGTTGGTCAAGGCTTCCTaGAGTGGCTCTACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: LVPEILFVSRFMRSESHQLVKAS*SGSTEH
Trigger: GTGCTCCGTAGAGCCACTTCAGGAAGCCTTGACCAA...CTGATGGCTCTCAGATCTCATGAACCTGGAAACAAATAATATTTCAGGAACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR GCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCGAGATACTGTTCTGTTaGATGCCAGCCAGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISEILFC*MPASPS
Trigger: ACTCGGACTGGCTGGCATGCAACAGAACAGTATCTC...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR GCA 90 bp AGGCATTCATGGCATAGGTTCCAAAATTGTCGATTCCCTCCTCCTGGCCTGCATATATCCACCTTTGACTaGTTCTTCTTCAATCCATCT +
Preference number: 4 (lower is better)
Translates to: RHSWHRFQNCRFPPPGLHISTFD*FFFNPS
Trigger: AGATGGATTGAAGAAGAAGCAGTCAAAGGTGGATAT...ATGCAGGCCAGGAGGAGGGAATCGACAATTTTGGAACCTATGCCATGAATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR GCA 90 bp AATATTCCAGTCCAGCTTCCAAAGGATTTGTATCACAGTTCATCTCTAACCCCCTGGATTATGCCATATTaGGTGCCAGGTAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: NIPVQLPKDLYHSSSLTPWIMPY*VPGRSS
Trigger: GCTGGATCTACCTGGCACGCAATATGGCATAATCCA...GGGGGTTAGAGATGAACTGTGATACAAATCCTTTGGAAGCTGGACTGGAATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517853.5
CDS-3UTR CCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCTTCCTTTCCAAAACCTaGAGGAACTCCATTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVFLSKT*RNSIGD
Trigger: GTCACCAATGGAGTTCCTCCAGGTTTTGGAAAGGAA...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp TTCAGATATAGTCGATGTAACAACATATTGATGTTGAACCGGAATGAGAGGATGCTGAGTGTCCTGGCCTaGTTTGTAGAACCAGTGCGG +
Preference number: 4 (lower is better)
Translates to: FRYSRCNNILMLNRNERMLSVLA*FVEPVR
Trigger: CCGCACTGGTTCTACAAACCAGGCCAGGACACTCAG...CATCCTCTCATTCCGGTTCAACATCAATATGTTGTTACATCGACTATATCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR CCA 90 bp CACTGCGCCGTCTCCCTTTGTGATGAAAGAGTTCTTCAGTACTCCATTGTTCTTGGCGTAAGGCATTCATaGCATAGGTTCCAAAATTGT +
Preference number: 4 (lower is better)
Translates to: HCAVSLCDERVLQYSIVLGVRHS*HRFQNC
Trigger: ACAATTTTGGAACCTATGCCATGAATGCCTTACGCC...AAGAACAATGGAGTACTGAAGAACTCTTTCATCACAAAGGGAGACGGCGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517853.5
ENST00000518477.5
ENST00000523732.1
CDS-3UTR CCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCGCTTTCATTTCCCTCTaGATCAACATCATCCGTTGC +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVAFISL*INIIRC
Trigger: GCAACGGATGATGTTGATCCAGAGGGAAATGAAAGC...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGCTGTCGGAGATAATATaGTCCTTCCAGGTCACGGAG +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKLSEII*SFQVTE
Trigger: CTCCGTGACCTGGAAGGATCATATTATCTCCGACAG...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp AACATCATATCCACCTTTGACTGCTTCTTCTTCAATCCATCTAAGATCATGAAGGCAGGATCCAGTCACTaGGATATTTCCCTACCCCAC +
Preference number: 4 (lower is better)
Translates to: NIISTFDCFFFNPSKIMKAGSSH*DISLPH
Trigger: GTGGGGTAGGGAAATATCTCAGTGACTGGATCCTGC...CTTCATGATCTTAGATGGATTGAAGAAGAAGCAGTCAAAGGTGGATATGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp TTTCCCTACTTGCTGACAGGTTTTGACAAGAACACGATTCACCCTAATAAGGCCATCCATCTAAGATCATaGAGTTCTGATCCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: FPYLLTGFDKNTIHPNKAIHLRS*SSDPEP
Trigger: TGGCTCTGGATCAGAACTTCATGATCTTAGATGGAT...GGCCTTATTAGGGTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGAATCTTCTCTTCTGTaGTACAGCTCCCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKESSLL*YSSQPS
Trigger: GCTGGGTTGGGAGCTGTATCACAGAAGAGAAGATTC...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR GCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCTACTGTTCTGTTGCATaGCAGCCAGTCCGAGTCATT +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISYCSVA*QPVRVI
Trigger: AATGACTCGGACTGGCTGGCATGCAACAGAACAGTA...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR GCA 90 bp ATGACATTTGCAAAGAGATGGTCCAGTAGTCTAATGGAATCTTGGCCTTTGATGAAAGGAGGTTCTCCATaGAGGATCCAGTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: MTFAKRWSSSLMESWPLMKGGSP*RIQSLR
Trigger: TCTCAGTGACTGGATCCTGCATGGAGAACCTCCTTT...CATCAAAGGCCAAGATTCCATTAGACTACTGGACCATCTCTTTGCAAATGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR GCA 90 bp TTTGCAAAGAGATGGTCCAGTAGTCTAATGGAATCTTGGCCTTTGATGTTAAACGCTCAAACCAGTTTGTaGGGCGAAAACTTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: FAKRWSSSLMESWPLMLNAQTSL*GENLAC
Trigger: ACAGGCCAAGTTTTCGCCGCACAAACTGGTTTGAGC...GTTTAACATCAAAGGCCAAGATTCCATTAGACTACTGGACCATCTCTTTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR GCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGTCCCTCCTCCTGGCCTaGATTCATGATAGCGTCATA +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKSLLLA*IHDSVI
Trigger: TATGACGCTATCATGAATGCAGGCCAGGAGGAGGGA...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR GCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGATCAACATCATCCGTTaGCAAGGTGAGGCAGACCAG +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKINIIR*QGEADQ
Trigger: CTGGTCTGCCTCACCTTGGCAACGGATGATGTTGAT...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR GCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCTTCCAGATGTCGTGTTaGCAACCACCTTGCCATTGT +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISFQMSC*QPPCHC
Trigger: ACAATGGCAAGGTGGTTGGCAACACGACATCTGGAA...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR GCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCCCAGACTCTTCTGGATaGTGTAGCTATAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISPDSSG*CSYSFQ
Trigger: CTGGAAGCTATAGCTACAGCATCCAGAAGAGTCTGG...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR GCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCAGTTCAACTTCCACTTaGTGTCCCACTTCACTTAGT +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVSSTST*CPTSLS
Trigger: ACTAAGTGAAGTGGGACAGCAAGTGGAAGTTGAACT...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGCTTTCATCCCTGCTTTaGCCAGGTGATAAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKLSSLL*PGDKPD
Trigger: GTCTGGCTTATCACCTGGCCAAAGCAGGGATGAAAG...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCAAGTCTGATACTACCTaGCTGATGGAATCCCACCAC +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISKSDTT*LMESHH
Trigger: GTGGTGGGATTCCATCAGCCAGGTAGTATCAGACTT...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp CCATTTGCCATAGCGATTAGGATCCAATTCTATCAGATCAAAAGGAGGTTCTCCTTCCTTTCCAAAACCTaGAGGAACTCCATTGGTGAC +
Preference number: 4 (lower is better)
Translates to: PFAIAIRIQFYQIKRRFSFLSKT*RNSIGD
Trigger: GTCACCAATGGAGTTCCTCCAGGTTTTGGAAAGGAA...GGAGAACCTCCTTTTGATCTGATAGAATTGGATCCTAATCGCTATGGCAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR CCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGCCTACCCCACCAGCGTaGATTATGCCATATCCAAAG +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKPTPPA*IMPYPK
Trigger: CTTTGGATATGGCATAATCCACGCTGGTGGGGTAGG...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCTTGGCCTCAGTGTACTaGGTTGTTGTCCATTTGCCA +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISLASVY*VVVHLP
Trigger: TGGCAAATGGACAACAACCCAGTACACTGAGGCCAA...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp CCATTTGCCATAGCGATTAGGATCCAATTCTATCAGATCAAAAGGAGGTTCTCCATGATTCTCTTGCTTTaGCCTCAGTGTACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: PFAIAIRIQFYQIKRRFSMILLL*PQCTGL
Trigger: CAACCCAGTACACTGAGGCCAAAGCAAGAGAATCAT...GGAGAACCTCCTTTTGATCTGATAGAATTGGATCCTAATCGCTATGGCAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp CACCCAGCCATTTTCCTCCTTAAAATGGGCAAAGCAGCTATTCTGATCCTTATTATGATTCTCTTGCTTTaGCCTCAGTGTACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: HPAIFLLKMGKAAILILIMILLL*PQCTGL
Trigger: CAACCCAGTACACTGAGGCCAAAGCAAGAGAATCAT...AATAAGGATCAGAATAGCTGCTTTGCCCATTTTAAGGAGGAAAATGGCTGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp CATTTAGATCTATGGGTTAGCAAGGTGTCTAATCAGCGGTACTTAATAAATGTCTGTGCGGCGAAAACTTaGCCTGTACTGAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: HLDLWVSKVSNQRYLINVCAAKT*PVLSVL
Trigger: CAGGACACTCAGTACAGGCCAAGTTTTCGCCGCACA...GACATTTATTAAGTACCGCTGATTAGACACCTTGCTAACCCATAGATCTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CCA 90 bp TTTCCCTACTTGCTGACAGGTTTTGACAAGAACACGATTCACCCTAATAAGGCCGGCGTAAGGCATTCATaGCATAGGTTCCAAAATTGT +
Preference number: 4 (lower is better)
Translates to: FPYLLTGFDKNTIHPNKAGVRHS*HRFQNC
Trigger: ACAATTTTGGAACCTATGCCATGAATGCCTTACGCC...GGCCTTATTAGGGTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCAAGCCGGTTTCTGGTTaGTTCGGTCAATACCAAAGG +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISKPVSG*FGQYQR
Trigger: CCTTTGGTATTGACCGAACCAACCAGAAACCGGCTT...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCTCTGAAGCCGGTTTCTaGTTGGTTCGGTCAATACCA +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISSEAGF*LVRSIP
Trigger: TGGTATTGACCGAACCAACCAGAAACCGGCTTCAGA...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
3UTR CAA 72 bp ATACTGTTCTGTTGCATGCCAGCCAGTCCGAGTCATTaGATATTTAAATTCATCTACCCTTACAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: ILFCCMPASPSH*IFKFIYPYRGG
Trigger: ACCACCCCTGTAAGGGTAGATGAATTTAAATATCAAATGACTCGGACTGGCTGGCATGCAACAGAACAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524206.1
3UTR CAA 72 bp GCCTTTTTCAAGACAGGAACCATTTCCATGGCAGCTTaGATGTGTTCCATGATTCGATCTAGATCAGACTCA +
Preference number: 4 (lower is better)
Translates to: AFFKTGTISMAA*MCSMIRSRSDS
Trigger: TGAGTCTGATCTAGATCGAATCATGGAACACATCAAAGCTGCCATGGAAATGGTTCCTGTCTTGAAAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR TCA 90 bp TTCAGATATAGTCGATGTAACAACATATTGATGTTGAACCGGAATGAGAGGATGCTGTCGGAGATAATATaGTCCTTCCAGGTCACGGAG +
Preference number: 4 (lower is better)
Translates to: FRYSRCNNILMLNRNERMLSEII*SFQVTE
Trigger: CTCCGTGACCTGGAAGGATCATATTATCTCCGACAG...CATCCTCTCATTCCGGTTCAACATCAATATGTTGTTACATCGACTATATCTGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000521052.5
CDS-3UTR TCA 90 bp CTCCATTGTTCTTTTCCCTACTTGCTGACAGGTTTTGACAAGAACACGATTCACAACCCACCTTTGGAATaGCATTTGCAAAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: LHCSFPYLLTGFDKNTIHNPPLE*HLQRDG
Trigger: ACCATCTCTTTGCAAATGTCATTCCAAAGGTGGGTT...GTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAAAGAACAATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517853.5
ENST00000518477.5
ENST00000523732.1
CDS-3UTR TCA 90 bp CCATTTGCCATAGCGATTAGGATCCAATTCTATCAGATCAAAAGGAGGTTCTCCCTTTTCCCTACTTGCTaGCAGGTTTTGACAAGAACA +
Preference number: 4 (lower is better)
Translates to: PFAIAIRIQFYQIKRRFSLFPTC*QVLTRT
Trigger: TGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAAAG...GGAGAACCTCCTTTTGATCTGATAGAATTGGATCCTAATCGCTATGGCAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR GCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGCACATCTTTCATCCCTaGTTTGGCCAGGTGATAAGC +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKHIFHP*FGQVIS
Trigger: GCTTATCACCTGGCCAAAGCAGGGATGAAAGATGTG...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR GCA 90 bp TTTAAATTCATCTACCCTTACAGGGGTGGTAGCAAGTCTGATACTACCTGGCTGATTCACAATTCTATTTaGTCTCATAGACCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FKFIYPYRGGSKSDTTWLIHNSI*SHRPLW
Trigger: CCACAGGGGTCTATGAGAGCAAATAGAATTGTGAAT...CAGCCAGGTAGTATCAGACTTGCTACCACCCCTGTAAGGGTAGATGAATTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524206.1
CDS-3UTR GCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGAAAGGAGGTTCTCCATaGAGGATCCAGTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKKGGSP*RIQSLR
Trigger: TCTCAGTGACTGGATCCTGCATGGAGAACCTCCTTT...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR GCA 90 bp TTAGTTCCTGAAATATTATTTGTTTCCAGGTTCATGAGATCTGAGAGCCATCAGTCCCTCCTCCTGGCCTaGATTCATGATAGCGTCATA +
Preference number: 4 (lower is better)
Translates to: LVPEILFVSRFMRSESHQSLLLA*IHDSVI
Trigger: TATGACGCTATCATGAATGCAGGCCAGGAGGAGGGA...CTGATGGCTCTCAGATCTCATGAACCTGGAAACAAATAATATTTCAGGAACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR GCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCTGTTGCCAACCACCTTaGCATTGTACCAGATGCTTT +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISCCQPP*HCTRCF
Trigger: AAAGCATCTGGTACAATGGCAAGGTGGTTGGCAACA...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGTCTCATAGACCCCTGTaGTGTTTCAACGTCCCATGT +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKSHRPL*CFNVPC
Trigger: ACATGGGACGTTGAAACACCACAGGGGTCTATGAGA...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCCTCTTGACTTTCATATaGACCAAACAAAAGCCCATC +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVLLTFI*TKQKPI
Trigger: GATGGGCTTTTGTTTGGTCCATATGAAAGTCAAGAG...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp TTTCCCTACTTGCTGACAGGTTTTGACAAGAACACGATTCACCCTAATAAGGCCCTCTTGACTTTCATATaGACCAAACAAAAGCCCATC +
Preference number: 4 (lower is better)
Translates to: FPYLLTGFDKNTIHPNKALLTFI*TKQKPI
Trigger: GATGGGCTTTTGTTTGGTCCATATGAAAGTCAAGAG...GGCCTTATTAGGGTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR CCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCATGATTCTCTTGCTTTaGCCTCAGTGTACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISMILLL*PQCTGL
Trigger: CAACCCAGTACACTGAGGCCAAAGCAAGAGAATCAT...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGATGTTGAACCGGAATaGGAGGATGTTCTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKDVEPE*EDVLVQ
Trigger: TTGGACTAGAACATCCTCTCATTCCGGTTCAACATC...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp CTCAGTGTACTGGGTTGTTGTCCATTTGCCATAGCGATTAGGATCCAATTCTATATTGTTGAATCCATATaGTTCTCTTGCTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSVLGCCPFAIAIRIQFYIVESI*FSCFGL
Trigger: GAGGCCAAAGCAAGAGAATCATATGGATTCAACAAT...ATAGAATTGGATCCTAATCGCTATGGCAAATGGACAACAACCCAGTACACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp TTAAACTTGCCAAATGGTGATAGGTCAGTTACCGCTACTCTTTGCATAACCTGTAACCCACCTTTGGAATaGCATTTGCAAAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: LNLPNGDRSVTATLCITCNPPLE*HLQRDG
Trigger: ACCATCTCTTTGCAAATGTCATTCCAAAGGTGGGTT...ACAGGTTATGCAAAGAGTAGCGGTAACTGACCTATCACCATTTGGCAAGTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp CATTTAGATCTATGGGTTAGCAAGGTGTCTAATCAGCGGTACTTAATAAATGTCTCAGAGGTCAGTTTCTaGAGGACCTTTCTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: HLDLWVSKVSNQRYLINVSEVSF*RTFLAC
Trigger: ACAGGCAAGAAAGGTCCTTCAGAAACTGACCTCTGA...GACATTTATTAAGTACCGCTGATTAGACACCTTGCTAACCCATAGATCTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR GCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATATCCACCTTTGACTaGTTCTTCTTCAATCCATCT +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVISTFD*FFFNPS
Trigger: AGATGGATTGAAGAAGAAGCAGTCAAAGGTGGATAT...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp TGTTGCATGCCAGCCAGTCCGAGTCATTTGATATTTAAATTCATCTACCCTTACATGTTCCATCTGACCTaGCTTTCAGAGAAGTTACTG +
Preference number: 4 (lower is better)
Translates to: CCMPASPSHLIFKFIYPYMFHLT*LSEKLL
Trigger: CAGTAACTTCTCTGAAAGCCAGGTCAGATGGAACAT...GTAAGGGTAGATGAATTTAAATATCAAATGACTCGGACTGGCTGGCATGCAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524206.1
CDS-3UTR CCA 90 bp CATTTAGATCTATGGGTTAGCAAGGTGTCTAATCAGCGGTACTTAATAAATGTCTCTCATAGACCCCTGTaGTGTTTCAACGTCCCATGT +
Preference number: 4 (lower is better)
Translates to: HLDLWVSKVSNQRYLINVSHRPL*CFNVPC
Trigger: ACATGGGACGTTGAAACACCACAGGGGTCTATGAGA...GACATTTATTAAGTACCGCTGATTAGACACCTTGCTAACCCATAGATCTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CCA 90 bp AACATCATATCCACCTTTGACTGCTTCTTCTTCAATCCATCTAAGATCATGAAGTTGGCCTCAGTGTACTaGGTTGTTGTCCATTTGCCA +
Preference number: 4 (lower is better)
Translates to: NIISTFDCFFFNPSKIMKLASVY*VVVHLP
Trigger: TGGCAAATGGACAACAACCCAGTACACTGAGGCCAA...CTTCATGATCTTAGATGGATTGAAGAAGAAGCAGTCAAAGGTGGATATGATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCACATTTGCAAAGAGATaGTCCAGTAGTCTAATGGAA +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVTFAKR*SSSLME
Trigger: TTCCATTAGACTACTGGACCATCTCTTTGCAAATGT...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCTGTAAAACCCACCTTTaGAATGACATTTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVCKTHL*NDICKE
Trigger: CTCTTTGCAAATGTCATTCCAAAGGTGGGTTTTACA...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp TTTCCCTACTTGCTGACAGGTTTTGACAAGAACACGATTCACCCTAATAAGGCCTGTAAAACCCACCTTTaGAATGACATTTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: FPYLLTGFDKNTIHPNKACKTHL*NDICKE
Trigger: CTCTTTGCAAATGTCATTCCAAAGGTGGGTTTTACA...GGCCTTATTAGGGTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCCATACACTCGACCCTTaGGTGTTAACATGTGACTTA +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISHTLDP*VLTCDL
Trigger: TAAGTCACATGTTAACACCCAAGGGTCGAGTGTATG...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCGGCGTAAGGCATTCATaGCATAGGTTCCAAAATTGT +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISGVRHS*HRFQNC
Trigger: ACAATTTTGGAACCTATGCCATGAATGCCTTACGCC...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp TTAGTTCCTGAAATATTATTTGTTTCCAGGTTCATGAGATCTGAGAGCCATCAGGATGTTGAACCGGAATaGGAGGATGTTCTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: LVPEILFVSRFMRSESHQDVEPE*EDVLVQ
Trigger: TTGGACTAGAACATCCTCTCATTCCGGTTCAACATC...CTGATGGCTCTCAGATCTCATGAACCTGGAAACAAATAATATTTCAGGAACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR TCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGAACCCACCTTTGGAATaGCATTTGCAAAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKNPPLE*HLQRDG
Trigger: ACCATCTCTTTGCAAATGTCATTCCAAAGGTGGGTT...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGATCCATCTAAGATCATaGAGTTCTGATCCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKIHLRS*SSDPEP
Trigger: TGGCTCTGGATCAGAACTTCATGATCTTAGATGGAT...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGTGCTTGCTTTCCTATaGAGTCTGCTGGCTTATTTA +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKVLAFL*SLLAYL
Trigger: TAAATAAGCCAGCAGACTTCATAGGAAAGCAAGCAC...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp AATATTCCAGTCCAGCTTCCAAAGGATTTGTATCACAGTTCATCTCTAACCCCCGCAAAGCAGCTATTCTaGTCCTTATTTAACTTCACA +
Preference number: 4 (lower is better)
Translates to: NIPVQLPKDLYHSSSLTPAKQLF*SLFNFT
Trigger: TGTGAAGTTAAATAAGGATCAGAATAGCTGCTTTGC...GGGGGTTAGAGATGAACTGTGATACAAATCCTTTGGAAGCTGGACTGGAATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp CTCCATTGTTCTTTTCCCTACTTGCTGACAGGTTTTGACAAGAACACGATTCACGCAAAGCAGCTATTCTaGTCCTTATTTAACTTCACA +
Preference number: 4 (lower is better)
Translates to: LHCSFPYLLTGFDKNTIHAKQLF*SLFNFT
Trigger: TGTGAAGTTAAATAAGGATCAGAATAGCTGCTTTGC...GTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAAAGAACAATGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517853.5
ENST00000518477.5
ENST00000523732.1
CDS-3UTR GCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCATTCACAATTCTATTTaGTCTCATAGACCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISIHNSI*SHRPLW
Trigger: CCACAGGGGTCTATGAGAGCAAATAGAATTGTGAAT...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR GCA 90 bp ATGTTAAACTTGCCAAATGGTGATAGGTCAGTTACCGCTACTCTTTGCATAACCGTTACCGCTACTCTTTaGATAACCTGTTTATACTCC +
Preference number: 4 (lower is better)
Translates to: MLNLPNGDRSVTATLCITVTATL*ITCLYS
Trigger: GGAGTATAAACAGGTTATGCAAAGAGTAGCGGTAAC...GGTTATGCAAAGAGTAGCGGTAACTGACCTATCACCATTTGGCAAGTTTAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGATGTTCCATCTGACCTaGCTTTCAGAGAAGTTACTG +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKMFHLT*LSEKLL
Trigger: CAGTAACTTCTCTGAAAGCCAGGTCAGATGGAACAT...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCAGTCTAATGGAATCTTaGCCTTTGATGTTAAACTTG +
Preference number: 4 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVSLMES*PLMLNL
Trigger: CAAGTTTAACATCAAAGGCCAAGATTCCATTAGACT...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CCA 90 bp CAGTCAGCTCAGCATACACTCGACCCTTGGGTGTTAACATGTGACTTATATTTGAGTCTAATGGAATCTTaGCCTTTGATGTTAAACTTG +
Preference number: 4 (lower is better)
Translates to: QSAQHTLDPWVLTCDLYLSLMES*PLMLNL
Trigger: CAAGTTTAACATCAAAGGCCAAGATTCCATTAGACT...CAAATATAAGTCACATGTTAACACCCAAGGGTCGAGTGTATGCTGAGCTGACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
3UTR CAA 72 bp AGTAGTCTAATGGAATCTTGGCCTTTGATGTTAAACTaGCCAAATGGTGATAGGTCAGTTACCGCTACTCTT +
Preference number: 4 (lower is better)
Translates to: SSLMESWPLMLN*PNGDRSVTATL
Trigger: AAGAGTAGCGGTAACTGACCTATCACCATTTGGCAAGTTTAACATCAAAGGCCAAGATTCCATTAGACTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR TCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGATTGTTGAATCCATATaGTTCTCTTGCTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKIVESI*FSCFGL
Trigger: GAGGCCAAAGCAAGAGAATCATATGGATTCAACAAT...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR GCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGACGAGCCCAAAATCCTaGAGCATTCACAATTCTATT +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKTSPKS*SIHNSI
Trigger: AATAGAATTGTGAATGCTGCAGGATTTTGGGCTCGT...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR GCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGTTACCGCTACTCTTTaGATAACCTGTTTATACTCC +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKVTATL*ITCLYS
Trigger: GGAGTATAAACAGGTTATGCAAAGAGTAGCGGTAAC...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR GCA 90 bp TGTTCTTTTCCCTACTTGCTGACAGGTTTTGACAAGAACACGATTCACCCTAATATATCCACCTTTGACTaGTTCTTCTTCAATCCATCT +
Preference number: 4 (lower is better)
Translates to: CSFPYLLTGFDKNTIHPNISTFD*FFFNPS
Trigger: AGATGGATTGAAGAAGAAGCAGTCAAAGGTGGATAT...ATTAGGGTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAAAGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp ATGACATTTGCAAAGAGATGGTCCAGTAGTCTAATGGAATCTTGGCCTTTGATGACATTTGCAAAGAGATaGTCCAGTAGTCTAATGGAA +
Preference number: 4 (lower is better)
Translates to: MTFAKRWSSSLMESWPLMTFAKR*SSSLME
Trigger: TTCCATTAGACTACTGGACCATCTCTTTGCAAATGT...CATCAAAGGCCAAGATTCCATTAGACTACTGGACCATCTCTTTGCAAATGTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp AACATCATATCCACCTTTGACTGCTTCTTCTTCAATCCATCTAAGATCATGAAGCATACACTCGACCCTTaGGTGTTAACATGTGACTTA +
Preference number: 4 (lower is better)
Translates to: NIISTFDCFFFNPSKIMKHTLDP*VLTCDL
Trigger: TAAGTCACATGTTAACACCCAAGGGTCGAGTGTATG...CTTCATGATCTTAGATGGATTGAAGAAGAAGCAGTCAAAGGTGGATATGATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CCA 90 bp TTGATGTGTTCCATGATTCGATCTAGATCAGACTCAAAGAGTTCCTTTCCAAAACATACACTCGACCCTTaGGTGTTAACATGTGACTTA +
Preference number: 4 (lower is better)
Translates to: LMCSMIRSRSDSKSSFPKHTLDP*VLTCDL
Trigger: TAAGTCACATGTTAACACCCAAGGGTCGAGTGTATG...TTTTGGAAAGGAACTCTTTGAGTCTGATCTAGATCGAATCATGGAACACATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR CCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGTTTGAAATGAATTCCTaGTTTCCTCTATTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKFEMNS*FPLFPW
Trigger: CCAGGGGAATAGAGGAAACCAGGAATTCATTTCAAA...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGCCAGTCCGAGTCATTTaGTATTTAAATTCATCTACC +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKPVRVI*YLNSST
Trigger: GGTAGATGAATTTAAATATCAAATGACTCGGACTGG...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp TTGATGTGTTCCATGATTCGATCTAGATCAGACTCAAAGAGTTCCTTTCCAAAAATTGTTGAATCCATATaGTTCTCTTGCTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LMCSMIRSRSDSKSSFPKIVESI*FSCFGL
Trigger: GAGGCCAAAGCAAGAGAATCATATGGATTCAACAAT...TTTTGGAAAGGAACTCTTTGAGTCTGATCTAGATCGAATCATGGAACACATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR GCA 90 bp TTAGTTCCTGAAATATTATTTGTTTCCAGGTTCATGAGATCTGAGAGCCATCAGGTTACCGCTACTCTTTaGATAACCTGTTTATACTCC +
Preference number: 4 (lower is better)
Translates to: LVPEILFVSRFMRSESHQVTATL*ITCLYS
Trigger: GGAGTATAAACAGGTTATGCAAAGAGTAGCGGTAAC...CTGATGGCTCTCAGATCTCATGAACCTGGAAACAAATAATATTTCAGGAACTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR GCA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCTTTAATCTGTTTCAGTaGTTGCTTTCCTATGAAGTC +
Preference number: 4 (lower is better)
Translates to: FPLFPWEPVIIISRTVISFNLFQ*LLSYEV
Trigger: GACTTCATAGGAAAGCAAGCACTGAAACAGATTAAA...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR GCA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGCTGCTGGGTAATTTTTaGCTAATAGTTCAACTTCCA +
Preference number: 4 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKLLGNF*LIVQLP
Trigger: TGGAAGTTGAACTATTAGGCAAAAATTACCCAGCAG...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR TCA 90 bp CATTTAGATCTATGGGTTAGCAAGGTGTCTAATCAGCGGTACTTAATAAATGTCGAACGGATGAATGAATaGTACATGTGTATCAACTTC +
Preference number: 4 (lower is better)
Translates to: HLDLWVSKVSNQRYLINVERMNE*YMCINF
Trigger: GAAGTTGATACACATGTATCATTCATTCATCCGTTC...GACATTTATTAAGTACCGCTGATTAGACACCTTGCTAACCCATAGATCTAAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CCA 90 bp GTCTCTGTGAATCTTCGTGGAGGTTCTCCAGAAATGGACAAAAATTCAATATTTACATTTGCAAAGAGATaGTCCAGTAGTCTAATGGAA +
Preference number: 4 (lower is better)
Translates to: VSVNLRGGSPEMDKNSIFTFAKR*SSSLME
Trigger: TTCCATTAGACTACTGGACCATCTCTTTGCAAATGT...AAATATTGAATTTTTGTCCATTTCTGGAGAACCTCCACGAAGATTCACAGAGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS GCA 90 bp GAGCCCTGCAGCGGGCAGCTCCGCAGCAGGAGGCCCCGCAGCAGCTaGGCGCCGGGACGGAGCATGACTAGGCCGAGGCCGAGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: EPCSGQLRSRRPRSS*APGRSMTRPRPRAQ
Trigger: CTGCGCCCTCGGCCTCGGCCTAGTCATGCTCCGTCCCGGCGCGCAGCTGCTGCGGGGCCTCCTGCTGCGGAGCTGCCCGCTGCAGGGCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255189.8
ENST00000521052.5
CDS GCA 90 bp CCTCTTTTCCCGGGTTCGGAGGCCACCTGTGCAGCAGGGCACACCTaGCACTCTCATCGCCCTCGGAGCCGGCAACCAGCCGACAGCCGG +
Preference number: 5 (lower is better)
Translates to: PLFPGSEATCAAGHT*HSHRPRSRQPADSR
Trigger: CCGGCTGTCGGCTGGTTGCCGGCTCCGAGGGCGATGAGAGTGGCAGGTGTGCCCTGCTGCACAGGTGGCCTCCGAACCCGGGAAAAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518707.1
ENST00000520388.5
ENST00000520855.1
CDS TCA 90 bp GCTGAGGCAGGAGAACCATTTGAACCCGGGAGGCGGAGATTGCAGTaGGCTGGGATTGCACCACACTTCAGCCTGGGCGGCAGAGCCAGA +
Preference number: 5 (lower is better)
Translates to: AEAGEPFEPGRRRLQ*AGIAPHFSLGGRAR
Trigger: TCTGGCTCTGCCGCCCAGGCTGAAGTGTGGTGCAATCCCAGCTCACTGCAATCTCCGCCTCCCGGGTTCAAATGGTTCTCCTGCCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520855.1
CDS-3UTR CAA 90 bp ACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCGTCTCCCTTTGTGATGGAGCCCACTGACTCGTaGAGTCGGCCTCCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: TTPRRKEARATAPSPFVMEPTDS*SRPPSK
Trigger: TTTGCTGGGAGGCCGACTCAACGAGTCAGTGGGCTC...CATCACAAAGGGAGACGGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CAA 90 bp GCCTGTACTGAGTGTCCTGGCCTGGTTTGTAGAACCAGTGCGGCTGCTCCCAGCCTTAGACTCCAGCCTTaGATAGAGCCCACTGACTCG +
Preference number: 5 (lower is better)
Translates to: ACTECPGLVCRTSAAAPSLRLQP*IEPTDS
Trigger: CGAGTCAGTGGGCTCTATCAAAGGCTGGAGTCTAAG...GCTGGGAGCAGCCGCACTGGTTCTACAAACCAGGCCAGGACACTCAGTACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp TTGGCCTGTACTGAGTGTCCTGGCCTGGTTTGTAGAACCAGTGCGGCTGCTCCCCCTCAGTGTACTGGGTaGTTGTCCATTTGCCATAGC +
Preference number: 5 (lower is better)
Translates to: LACTECPGLVCRTSAAAPPQCTG*LSICHS
Trigger: GCTATGGCAAATGGACAACAACCCAGTACACTGAGG...GGGAGCAGCCGCACTGGTTCTACAAACCAGGCCAGGACACTCAGTACAGGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp TGCATAACCTGTTTATACTCCGAGCCCACAGGCTCAAACCAGTTTGTGCGGCGAGAGCCCACTGACTCGTaGAGTCGGCCTCCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: CITCLYSEPTGSNQFVRREPTDS*SRPPSK
Trigger: TTTGCTGGGAGGCCGACTCAACGAGTCAGTGGGCTC...TCGCCGCACAAACTGGTTTGAGCCTGTGGGCTCGGAGTATAAACAGGTTATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp CATAAGCCAACAGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCCAGGCTCAAACCAGTTaGTGCGGCGAAAACTTGGCC +
Preference number: 5 (lower is better)
Translates to: HKPTAGEGGWNNSKTEGSQAQTS*CGENLA
Trigger: GGCCAAGTTTTCGCCGCACAAACTGGTTTGAGCCTG...GCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CAA 90 bp TCACATAAGCCAACAGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGACACAAGATGGCAGTGTaGTATGCGGCTGGAGAGCCC +
Preference number: 5 (lower is better)
Translates to: SHKPTAGEGGWNNSKTEGHKMAV*YAAGEP
Trigger: GGGCTCTCCAGCCGCATACAACACTGCCATCTTGTG...TCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTTATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CAA 90 bp CCCTCCTCCTGGCCTGCATTCATGATAGCGTCATACAGCGCCACAGAATCTTCTCAGGCTCAAACCAGTTaGTGCGGCGAAAACTTGGCC +
Preference number: 5 (lower is better)
Translates to: PSSWPAFMIASYSATESSQAQTS*CGENLA
Trigger: GGCCAAGTTTTCGCCGCACAAACTGGTTTGAGCCTG...AGAAGATTCTGTGGCGCTGTATGACGCTATCATGAATGCAGGCCAGGAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp TCACATAAGCCAACAGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGATTGTGCGGCGAAAACTaGGCCTGTACTGAGTGTCCT +
Preference number: 5 (lower is better)
Translates to: SHKPTAGEGGWNNSKTEGLCGEN*ACTECP
Trigger: AGGACACTCAGTACAGGCCAAGTTTTCGCCGCACAA...TCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTTATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CAA 90 bp GAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCGTCTCCCACATCATATCCACCTTaGACTGCTTCTTCTTCAATC +
Preference number: 5 (lower is better)
Translates to: EAGTTPRRKEARATAPSPTSYPP*TASSSI
Trigger: GATTGAAGAAGAAGCAGTCAAAGGTGGATATGATGT...GGGAGACGGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CAA 90 bp AGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGGCAGTGACAGGAATGTaGGAAACCTTTAAGGACTTG +
Preference number: 5 (lower is better)
Translates to: SRGRRLEQLQDGRKQGPLAVTGM*ETFKDL
Trigger: CAAGTCCTTAAAGGTTTCCAACATTCCTGTCACTGC...CAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CAA 90 bp GAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCGTCTCCCTTCTTCAGTACTCCATaGTTCTTTTCCCTACTTGCT +
Preference number: 5 (lower is better)
Translates to: EAGTTPRRKEARATAPSPFFSTP*FFSLLA
Trigger: AGCAAGTAGGGAAAAGAACAATGGAGTACTGAAGAA...GGGAGACGGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CAA 90 bp TCACATAAGCCAACAGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGACCTCAGTGTACTGGGTaGTTGTCCATTTGCCATAGC +
Preference number: 5 (lower is better)
Translates to: SHKPTAGEGGWNNSKTEGPQCTG*LSICHS
Trigger: GCTATGGCAAATGGACAACAACCCAGTACACTGAGG...TCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTTATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CAA 90 bp AGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGATCCATATGATTCTCTaGCTTTGGCCTCAGTGTACT +
Preference number: 5 (lower is better)
Translates to: SRGRRLEQLQDGRKQGPLIHMIL*LWPQCT
Trigger: AGTACACTGAGGCCAAAGCAAGAGAATCATATGGAT...CAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CAA 90 bp CCTTACAGGGGTGGTAGCAAGTCTGATACTACCTGGCTGATGGAATCCCACCACCAGGATGAAAGTAAGTaGTTAAACCCTTCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: PYRGGSKSDTTWLMESHHQDESK*LNPSRP
Trigger: CGGCCGGGAAGGGTTTAACAACTTACTTTCATCCTG...GTGGTGGGATTCCATCAGCCAGGTAGTATCAGACTTGCTACCACCCCTGTAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524206.1
CDS CCA 90 bp GTTGCCAACCACCTTGCCATTGTACCAGATGCTTTCATTTCCCTCTaGATCAACATCATCCGTTGCCAAGGTGAGGCAGACCAGTCTTCG +
Preference number: 5 (lower is better)
Translates to: VANHLAIVPDAFISL*INIIRCQGEADQSS
Trigger: CGAAGACTGGTCTGCCTCACCTTGGCAACGGATGATGTTGATCCAGAGGGAAATGAAAGCATCTGGTACAATGGCAAGGTGGTTGGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp AGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGATGTAACAACATATaGATGTTGAACCGGAATGAG +
Preference number: 5 (lower is better)
Translates to: SRGRRLEQLQDGRKQGPLRCNNI*MLNRNE
Trigger: CTCATTCCGGTTCAACATCAATATGTTGTTACATCG...CAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CAA 90 bp TGCATAACCTGTTTATACTCCGAGCCCACAGGCTCAAACCAGTTTGTGCGGCGACCTCAGTGTACTGGGTaGTTGTCCATTTGCCATAGC +
Preference number: 5 (lower is better)
Translates to: CITCLYSEPTGSNQFVRRPQCTG*LSICHS
Trigger: GCTATGGCAAATGGACAACAACCCAGTACACTGAGG...TCGCCGCACAAACTGGTTTGAGCCTGTGGGCTCGGAGTATAAACAGGTTATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp GCGGCGAAAACTTGGCCTGTACTGAGTGTCCTGGCCTGGTTTGTAGAACCAGTGTATGATTCTCTTGCTTaGGCCTCAGTGTACTGGGTT +
Preference number: 5 (lower is better)
Translates to: AAKTWPVLSVLAWFVEPVYDSLA*ASVYWV
Trigger: AACCCAGTACACTGAGGCCAAAGCAAGAGAATCATA...CACTGGTTCTACAAACCAGGCCAGGACACTCAGTACAGGCCAAGTTTTCGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp TCCTCCTGGCCTGCATTCATGATAGCGTCATACAGCGCCACAGAATCTTCTCTTTTGTGCGGCGAAAACTaGGCCTGTACTGAGTGTCCT +
Preference number: 5 (lower is better)
Translates to: SSWPAFMIASYSATESSLLCGEN*ACTECP
Trigger: AGGACACTCAGTACAGGCCAAGTTTTCGCCGCACAA...AAGAGAAGATTCTGTGGCGCTGTATGACGCTATCATGAATGCAGGCCAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp CGGCTGCTCCCAGCCAGCATGGAACCCCATGGAACACTTAGACTCCAGCCTTTGAGTTACCGCTACTCTTaGCATAACCTGTTTATACTC +
Preference number: 5 (lower is better)
Translates to: RLLPASMEPHGTLRLQPLSYRYS*HNLFIL
Trigger: GAGTATAAACAGGTTATGCAAAGAGTAGCGGTAACT...CAAAGGCTGGAGTCTAAGTGTTCCATGGGGTTCCATGCTGGCTGGGAGCAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp AGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCCTTTGATGTTAAACTaGCCAAATGGTGATAGGTCA +
Preference number: 5 (lower is better)
Translates to: SRGRRLEQLQDGRKQGPLPLMLN*PNGDRS
Trigger: TGACCTATCACCATTTGGCAAGTTTAACATCAAAGG...CAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CAA 90 bp GATGGCCCATCTGCTCACCCAGCCATTTTCCTCCTTAAAATGGGCAAAGCAGCTAAACTCCCCAGGAGATaGGTGAGAAACAGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: DGPSAHPAIFLLKMGKAAKLPRR*VRNSQL
Trigger: GAGCTGACTGTTTCTCACCAATCTCCTGGGGAGTTT...AGCTGCTTTGCCCATTTTAAGGAGGAAAATGGCTGGGTGAGCAGATGGGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp GCGGCGAAAACTTGGCCTGTACTGAGTGTCCTGGCCTGGTTTGTAGAACCAGTGGGACCATTGACAACATaGATGATGTCAGCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: AAKTWPVLSVLAWFVEPVGPLTT*MMSAFF
Trigger: GAAAAAGGCTGACATCATCAATGTTGTCAATGGTCC...CACTGGTTCTACAAACCAGGCCAGGACACTCAGTACAGGCCAAGTTTTCGCCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR CAA 90 bp TCACATAAGCCAACAGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGATATGATTCTCTTGCTTaGGCCTCAGTGTACTGGGTT +
Preference number: 5 (lower is better)
Translates to: SHKPTAGEGGWNNSKTEGYDSLA*ASVYWV
Trigger: AACCCAGTACACTGAGGCCAAAGCAAGAGAATCATA...TCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTTATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CAA 90 bp AATATTCCAGTCCAGCTTCCAAAGGATTTGTATCACAGTTCATCTCTAACCCCCGAGCCCACTGACTCGTaGAGTCGGCCTCCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: NIPVQLPKDLYHSSSLTPEPTDS*SRPPSK
Trigger: TTTGCTGGGAGGCCGACTCAACGAGTCAGTGGGCTC...GGGGGTTAGAGATGAACTGTGATACAAATCCTTTGGAAGCTGGACTGGAATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp GGAGCACTTCCCACAAGATGGCAGTGTTGTATGCGGCTGGAGAGCCCTCCACTTAGTTACCGCTACTCTTaGCATAACCTGTTTATACTC +
Preference number: 5 (lower is better)
Translates to: GALPTRWQCCMRLESPPLSYRYS*HNLFIL
Trigger: GAGTATAAACAGGTTATGCAAAGAGTAGCGGTAACT...AAGTGGAGGGCTCTCCAGCCGCATACAACACTGCCATCTTGTGGGAAGTGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CAA 90 bp ATTCATGGCATAGGTTCCAAAATTGTCGATTCCCTCCTCCTGGCCTGCATTCATTCTGAAGGACCTTTCTaGCCTGTGGCCCAGCAACTC +
Preference number: 5 (lower is better)
Translates to: IHGIGSKIVDSLLLACIHSEGPF*PVAQQL
Trigger: GAGTTGCTGGGCCACAGGCAAGAAAGGTCCTTCAGA...ATGAATGCAGGCCAGGAGGAGGGAATCGACAATTTTGGAACCTATGCCATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp ATACAGCTCCCAACCCAGCTCACCAGTATAAGATATCCTAATAGCAGTGACAGGTCTGAAGGACCTTTCTaGCCTGTGGCCCAGCAACTC +
Preference number: 5 (lower is better)
Translates to: IQLPTQLTSIRYPNSSDRSEGPF*PVAQQL
Trigger: GAGTTGCTGGGCCACAGGCAAGAAAGGTCCTTCAGA...CCTGTCACTGCTATTAGGATATCTTATACTGGTGAGCTGGGTTGGGAGCTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp TTATACTCCGAGCCCACAGGCTCAAACCAGTTTGTGCGGCGAAAACTTGGCCTGGCAGTGACAGGAATGTaGGAAACCTTTAAGGACTTG +
Preference number: 5 (lower is better)
Translates to: LYSEPTGSNQFVRRKLGLAVTGM*ETFKDL
Trigger: CAAGTCCTTAAAGGTTTCCAACATTCCTGTCACTGC...CAGGCCAAGTTTTCGCCGCACAAACTGGTTTGAGCCTGTGGGCTCGGAGTATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp ACAACTCCAAGACGGAAGGAAGCAAGGGCCACTGCGCCGTCTCCCTTTGTGATGCAGCTTCCAAAGGATTaGTATCACAGTTCATCTCTA +
Preference number: 5 (lower is better)
Translates to: TTPRRKEARATAPSPFVMQLPKD*YHSSSL
Trigger: TAGAGATGAACTGTGATACAAATCCTTTGGAAGCTG...CATCACAAAGGGAGACGGCGCAGTGGCCCTTGCTTCCTTCCGTCTTGGAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS GCA 90 bp ATTGTACCAGATGCTTTCATTTCCCTCTGGATCAACATCATCCGTTaGCAAGGTGAGGCAGACCAGTCTTCGTTTCAGCCCCTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: IVPDAFISLWINIIR*QGEADQSSFQPLGF
Trigger: AAAGCCAAGGGGCTGAAACGAAGACTGGTCTGCCTCACCTTGGCAACGGATGATGTTGATCCAGAGGGAAATGAAAGCATCTGGTACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS GCA 90 bp CACTTAGTTGTACAGGGACATATGCGAAAGCCAGACTCTTCTGGATaGTGTAGCTATAGCTTCCAGATGTCGTGTTGCCAACCACCTTGC +
Preference number: 5 (lower is better)
Translates to: HLVVQGHMRKPDSSG*CSYSFQMSCCQPPC
Trigger: GCAAGGTGGTTGGCAACACGACATCTGGAAGCTATAGCTACAGCATCCAGAAGAGTCTGGCTTTCGCATATGTCCCTGTACAACTAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp CATAAGCCAACAGCAGGGGAAGGAGGCTGGAACAACTCCAAGACGGAAGGAAGCTACGTGATAGGACCATaGACAACATTGATGATGTCA +
Preference number: 5 (lower is better)
Translates to: HKPTAGEGGWNNSKTEGSYVIGP*TTLMMS
Trigger: TGACATCATCAATGTTGTCAATGGTCCTATCACGTA...GCTTCCTTCCGTCTTGGAGTTGTTCCAGCCTCCTTCCCCTGCTGTTGGCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CAA 90 bp CACTGCGCCGTCTCCCTTTGTGATGAAAGAGTTCTTCAGTACTCCATTGTTCTTCTTAGACTCCAGCCTTaGATAGAGCCCACTGACTCG +
Preference number: 5 (lower is better)
Translates to: HCAVSLCDERVLQYSIVLLRLQP*IEPTDS
Trigger: CGAGTCAGTGGGCTCTATCAAAGGCTGGAGTCTAAG...AAGAACAATGGAGTACTGAAGAACTCTTTCATCACAAAGGGAGACGGCGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517853.5
ENST00000518477.5
ENST00000523732.1
CDS-3UTR CAA 90 bp CTTCCAGGTCACGGAGCACAGGCAGTTCTCGTTTCAAAGCTTTCACTTCAGATACAGGATGAAAGTAAGTaGTTAAACCCTTCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: LPGHGAQAVLVSKLSLQIQDESK*LNPSRP
Trigger: CGGCCGGGAAGGGTTTAACAACTTACTTTCATCCTG...TATCTGAAGTGAAAGCTTTGAAACGAGAACTGCCTGTGCTCCGTGACCTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521052.5
CDS-3UTR CAA 90 bp GATGGCCCATCTGCTCACCCAGCCATTTTCCTCCTTAAAATGGGCAAAGCAGCTATTTCCATGGCAGCTTaGATGTGTTCCATGATTCGA +
Preference number: 5 (lower is better)
Translates to: DGPSAHPAIFLLKMGKAAISMAA*MCSMIR
Trigger: TCGAATCATGGAACACATCAAAGCTGCCATGGAAAT...AGCTGCTTTGCCCATTTTAAGGAGGAAAATGGCTGGGTGAGCAGATGGGCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR CAA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGAGCCCACTGACTCGTaGAGTCGGCCTCCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKEPTDS*SRPPSK
Trigger: TTTGCTGGGAGGCCGACTCAACGAGTCAGTGGGCTC...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp TTTCCCTACTTGCTGACAGGTTTTGACAAGAACACGATTCACCCTAATAAGGCCTTGTGCGGCGAAAACTaGGCCTGTACTGAGTGTCCT +
Preference number: 5 (lower is better)
Translates to: FPYLLTGFDKNTIHPNKALCGEN*ACTECP
Trigger: AGGACACTCAGTACAGGCCAAGTTTTCGCCGCACAA...GGCCTTATTAGGGTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp GAGCCCACTGACTCGTTGAGTCGGCCTCCCAGCAAACCGTTCTTCTTTAGGATACCTTTGATGTTAAACTaGCCAAATGGTGATAGGTCA +
Preference number: 5 (lower is better)
Translates to: EPTDSLSRPPSKPFFFRIPLMLN*PNGDRS
Trigger: TGACCTATCACCATTTGGCAAGTTTAACATCAAAGG...TATCCTAAAGAAGAACGGTTTGCTGGGAGGCCGACTCAACGAGTCAGTGGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp CACTGCGCCGTCTCCCTTTGTGATGAAAGAGTTCTTCAGTACTCCATTGTTCTTAAACTCCCCAGGAGATaGGTGAGAAACAGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: HCAVSLCDERVLQYSIVLKLPRR*VRNSQL
Trigger: GAGCTGACTGTTTCTCACCAATCTCCTGGGGAGTTT...AAGAACAATGGAGTACTGAAGAACTCTTTCATCACAAAGGGAGACGGCGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517853.5
ENST00000518477.5
ENST00000523732.1
CDS-3UTR CAA 90 bp GAAGGGTTATCTTCACAATTACGGCTAAGAACGTATCCCTACAGCTTTAGTTCCTCTGAAGGACCTTTCTaGCCTGTGGCCCAGCAACTC +
Preference number: 5 (lower is better)
Translates to: EGLSSQLRLRTYPYSFSSSEGPF*PVAQQL
Trigger: GAGTTGCTGGGCCACAGGCAAGAAAGGTCCTTCAGA...GGAACTAAAGCTGTAGGGATACGTTCTTAGCCGTAATTGTGAAGATAACCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS TCA 90 bp ATTCTATCAGATCAAAAGGAGGTTCTCCATGCAGGATCCAGTCACTaGGATATTTCCCTACCCCACCAGCGTGGATTATGCCATATTGCG +
Preference number: 5 (lower is better)
Translates to: ILSDQKEVLHAGSSH*DISLPHQRGLCHIA
Trigger: CGCAATATGGCATAATCCACGCTGGTGGGGTAGGGAAATATCTCAGTGACTGGATCCTGCATGGAGAACCTCCTTTTGATCTGATAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517853.5
CDS-3UTR CAA 90 bp CATCCCTTTCCTGTCGGAGATAATATGATCCTTCCAGGTCACGGAGCACAGGCACGATGTAACAACATATaGATGTTGAACCGGAATGAG +
Preference number: 5 (lower is better)
Translates to: HPFPVGDNMILPGHGAQARCNNI*MLNRNE
Trigger: CTCATTCCGGTTCAACATCAATATGTTGTTACATCG...TGCCTGTGCTCCGTGACCTGGAAGGATCATATTATCTCCGACAGGAAAGGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000521052.5
CDS-3UTR CAA 90 bp CACTGCGCCGTCTCCCTTTGTGATGAAAGAGTTCTTCAGTACTCCATTGTTCTTCAGTGTACTGGGTTGTaGTCCATTTGCCATAGCGAT +
Preference number: 5 (lower is better)
Translates to: HCAVSLCDERVLQYSIVLQCTGL*SICHSD
Trigger: ATCGCTATGGCAAATGGACAACAACCCAGTACACTG...AAGAACAATGGAGTACTGAAGAACTCTTTCATCACAAAGGGAGACGGCGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517853.5
ENST00000518477.5
ENST00000523732.1
CDS-3UTR CAA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCCAGGCTCAAACCAGTTaGTGCGGCGAAAACTTGGCC +
Preference number: 5 (lower is better)
Translates to: FPLFPWEPVIIISRTVISQAQTS*CGENLA
Trigger: GGCCAAGTTTTCGCCGCACAAACTGGTTTGAGCCTG...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCTCTGAAGGACCTTTCTaGCCTGTGGCCCAGCAACTC +
Preference number: 5 (lower is better)
Translates to: FPLFPWEPVIIISRTVISSEGPF*PVAQQL
Trigger: GAGTTGCTGGGCCACAGGCAAGAAAGGTCCTTCAGA...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCGTGTTGCCAACCACCTaGCCATTGTACCAGATGCTT +
Preference number: 5 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVVLPTT*PLYQML
Trigger: AAGCATCTGGTACAATGGCAAGGTGGTTGGCAACAC...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp AAAGCCCATCCCTTTCCTGTCGGAGATAATATGATCCTTCCAGGTCACGGAGCAAACAACATATTGATGTaGAACCGGAATGAGAGGATG +
Preference number: 5 (lower is better)
Translates to: KAHPFPVGDNMILPGHGANNILM*NRNERM
Trigger: CATCCTCTCATTCCGGTTCAACATCAATATGTTGTT...TGCTCCGTGACCTGGAAGGATCATATTATCTCCGACAGGAAAGGGATGGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000521052.5
CDS-3UTR CAA 90 bp CAGTCAGCTCAGCATACACTCGACCCTTGGGTGTTAACATGTGACTTATATTTGCAGTGTACTGGGTTGTaGTCCATTTGCCATAGCGAT +
Preference number: 5 (lower is better)
Translates to: QSAQHTLDPWVLTCDLYLQCTGL*SICHSD
Trigger: ATCGCTATGGCAAATGGACAACAACCCAGTACACTG...CAAATATAAGTCACATGTTAACACCCAAGGGTCGAGTGTATGCTGAGCTGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp ATGTTAAACTTGCCAAATGGTGATAGGTCAGTTACCGCTACTCTTTGCATAACCCTTAGACTCCAGCCTTaGATAGAGCCCACTGACTCG +
Preference number: 5 (lower is better)
Translates to: MLNLPNGDRSVTATLCITLRLQP*IEPTDS
Trigger: CGAGTCAGTGGGCTCTATCAAAGGCTGGAGTCTAAG...GGTTATGCAAAGAGTAGCGGTAACTGACCTATCACCATTTGGCAAGTTTAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCTTGTGCGGCGAAAACTaGGCCTGTACTGAGTGTCCT +
Preference number: 5 (lower is better)
Translates to: FPLFPWEPVIIISRTVISLCGEN*ACTECP
Trigger: AGGACACTCAGTACAGGCCAAGTTTTCGCCGCACAA...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp TTTGGCCTCAGTGTACTGGGTTGTTGTCCATTTGCCATAGCGATTAGGATCCAAGCAGTGACAGGAATGTaGGAAACCTTTAAGGACTTG +
Preference number: 5 (lower is better)
Translates to: FGLSVLGCCPFAIAIRIQAVTGM*ETFKDL
Trigger: CAAGTCCTTAAAGGTTTCCAACATTCCTGTCACTGC...TTGGATCCTAATCGCTATGGCAAATGGACAACAACCCAGTACACTGAGGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp AGGCATTCATGGCATAGGTTCCAAAATTGTCGATTCCCTCCTCCTGGCCTGCATTTCTTCAGTACTCCATaGTTCTTTTCCCTACTTGCT +
Preference number: 5 (lower is better)
Translates to: RHSWHRFQNCRFPPPGLHFFSTP*FFSLLA
Trigger: AGCAAGTAGGGAAAAGAACAATGGAGTACTGAAGAA...ATGCAGGCCAGGAGGAGGGAATCGACAATTTTGGAACCTATGCCATGAATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp GACTCGTTGAGTCGGCCTCCCAGCAAACCGTTCTTCTTTAGGATAACCAACAATCGATGTAACAACATATaGATGTTGAACCGGAATGAG +
Preference number: 5 (lower is better)
Translates to: DSLSRPPSKPFFFRITNNRCNNI*MLNRNE
Trigger: CTCATTCCGGTTCAACATCAATATGTTGTTACATCG...ATTGTTGGTTATCCTAAAGAAGAACGGTTTGCTGGGAGGCCGACTCAACGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR CAA 90 bp CACTGCGCCGTCTCCCTTTGTGATGAAAGAGTTCTTCAGTACTCCATTGTTCTTATTTCCATGGCAGCTTaGATGTGTTCCATGATTCGA +
Preference number: 5 (lower is better)
Translates to: HCAVSLCDERVLQYSIVLISMAA*MCSMIR
Trigger: TCGAATCATGGAACACATCAAAGCTGCCATGGAAAT...AAGAACAATGGAGTACTGAAGAACTCTTTCATCACAAAGGGAGACGGCGCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000523732.1
CDS-3UTR CAA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCCCTCAGTGTACTGGGTaGTTGTCCATTTGCCATAGC +
Preference number: 5 (lower is better)
Translates to: FPLFPWEPVIIISRTVISPQCTG*LSICHS
Trigger: GCTATGGCAAATGGACAACAACCCAGTACACTGAGG...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp TTTCCCTACTTGCTGACAGGTTTTGACAAGAACACGATTCACCCTAATAAGGCCTATGATTCTCTTGCTTaGGCCTCAGTGTACTGGGTT +
Preference number: 5 (lower is better)
Translates to: FPYLLTGFDKNTIHPNKAYDSLA*ASVYWV
Trigger: AACCCAGTACACTGAGGCCAAAGCAAGAGAATCATA...GGCCTTATTAGGGTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp CACTGCGCCGTCTCCCTTTGTGATGAAAGAGTTCTTCAGTACTCCATTGTTCTTATCCATATGATTCTCTaGCTTTGGCCTCAGTGTACT +
Preference number: 5 (lower is better)
Translates to: HCAVSLCDERVLQYSIVLIHMIL*LWPQCT
Trigger: AGTACACTGAGGCCAAAGCAAGAGAATCATATGGAT...AAGAACAATGGAGTACTGAAGAACTCTTTCATCACAAAGGGAGACGGCGCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517853.5
ENST00000518477.5
ENST00000523732.1
CDS-3UTR CAA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGCTTAGACTCCAGCCTTaGATAGAGCCCACTGACTCG +
Preference number: 5 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKLRLQP*IEPTDS
Trigger: CGAGTCAGTGGGCTCTATCAAAGGCTGGAGTCTAAG...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp GACTCGTTGAGTCGGCCTCCCAGCAAACCGTTCTTCTTTAGGATAACCAACAATCAGCTTCCAAAGGATTaGTATCACAGTTCATCTCTA +
Preference number: 5 (lower is better)
Translates to: DSLSRPPSKPFFFRITNNQLPKD*YHSSSL
Trigger: TAGAGATGAACTGTGATACAAATCCTTTGGAAGCTG...ATTGTTGGTTATCCTAAAGAAGAACGGTTTGCTGGGAGGCCGACTCAACGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCCTTCGTTTCAGCCCCTaGGCTTTAATCTGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVLRFSP*ALICFS
Trigger: ACTGAAACAGATTAAAGCCAAGGGGCTGAAACGAAG...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCCCAACCACCTTGCCATaGTACCAGATGCTTTCATTT +
Preference number: 5 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVPTTLP*YQMLSF
Trigger: AAATGAAAGCATCTGGTACAATGGCAAGGTGGTTGG...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGCTTCCAGATGTCGTGTaGCCAACCACCTTGCCATTG +
Preference number: 5 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKLPDVV*PTTLPL
Trigger: CAATGGCAAGGTGGTTGGCAACACGACATCTGGAAG...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp AGGCTTTCTCCAGGCGTAAGGCATTCATGGCATAGGTTCCAAAATTGTCGATTCTGTTCTTTTCCCTACTaGCTGACAGGTTTTGACAAG +
Preference number: 5 (lower is better)
Translates to: RLSPGVRHSWHRFQNCRFCSFPY*LTGFDK
Trigger: CTTGTCAAAACCTGTCAGCAAGTAGGGAAAAGAACA...GAATCGACAATTTTGGAACCTATGCCATGAATGCCTTACGCCTGGAGAAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp CATTTAGATCTATGGGTTAGCAAGGTGTCTAATCAGCGGTACTTAATAAATGTCTGGAGAGCCCTCCACTaGCGGAAGGGTTATCTTCAC +
Preference number: 5 (lower is better)
Translates to: HLDLWVSKVSNQRYLINVWRALH*RKGYLH
Trigger: GTGAAGATAACCCTTCCGCAAGTGGAGGGCTCTCCA...GACATTTATTAAGTACCGCTGATTAGACACCTTGCTAACCCATAGATCTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CAA 90 bp GTTTCAACGTCCCATGTTCCATCTGACCTGGCTTTCAGAGAAGTTACTGGTGCAGCCAGTCCGAGTCATTaGATATTTAAATTCATCTAC +
Preference number: 5 (lower is better)
Translates to: VSTSHVPSDLAFREVTGAASPSH*IFKFIY
Trigger: GTAGATGAATTTAAATATCAAATGACTCGGACTGGC...TGCACCAGTAACTTCTCTGAAAGCCAGGTCAGATGGAACATGGGACGTTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524206.1
CDS-3UTR CAA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTTCCATGGCAGCTTaGATGTGTTCCATGATTCGA +
Preference number: 5 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVISMAA*MCSMIR
Trigger: TCGAATCATGGAACACATCAAAGCTGCCATGGAAAT...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCCAGTGTACTGGGTTGTaGTCCATTTGCCATAGCGAT +
Preference number: 5 (lower is better)
Translates to: FPLFPWEPVIIISRTVISQCTGL*SICHSD
Trigger: ATCGCTATGGCAAATGGACAACAACCCAGTACACTG...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp TTGACTTTCATATGGACCAAACAAAAGCCCATCCCTTTCCTGTCGGAGATAATACAGTGTACTGGGTTGTaGTCCATTTGCCATAGCGAT +
Preference number: 5 (lower is better)
Translates to: LTFIWTKQKPIPFLSEIIQCTGL*SICHSD
Trigger: ATCGCTATGGCAAATGGACAACAACCCAGTACACTG...TATTATCTCCGACAGGAAAGGGATGGGCTTTTGTTTGGTCCATATGAAAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR CAA 90 bp CACTGCGCCGTCTCCCTTTGTGATGAAAGAGTTCTTCAGTACTCCATTGTTCTTAGTTACCGCTACTCTTaGCATAACCTGTTTATACTC +
Preference number: 5 (lower is better)
Translates to: HCAVSLCDERVLQYSIVLSYRYS*HNLFIL
Trigger: GAGTATAAACAGGTTATGCAAAGAGTAGCGGTAACT...AAGAACAATGGAGTACTGAAGAACTCTTTCATCACAAAGGGAGACGGCGCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517853.5
ENST00000518477.5
ENST00000523732.1
CDS-3UTR CAA 90 bp ATACAGCTCCCAACCCAGCTCACCAGTATAAGATATCCTAATAGCAGTGACAGGCCTTTGATGTTAAACTaGCCAAATGGTGATAGGTCA +
Preference number: 5 (lower is better)
Translates to: IQLPTQLTSIRYPNSSDRPLMLN*PNGDRS
Trigger: TGACCTATCACCATTTGGCAAGTTTAACATCAAAGG...CCTGTCACTGCTATTAGGATATCTTATACTGGTGAGCTGGGTTGGGAGCTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGAAACTCCCCAGGAGATaGGTGAGAAACAGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKKLPRR*VRNSQL
Trigger: GAGCTGACTGTTTCTCACCAATCTCCTGGGGAGTTT...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGAAGCCGGTTTCTGGTaGGTTCGGTCAATACCAAAG +
Preference number: 5 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKEAGFW*VRSIPK
Trigger: CTTTGGTATTGACCGAACCAACCAGAAACCGGCTTC...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCCGATGTAACAACATATaGATGTTGAACCGGAATGAG +
Preference number: 5 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVRCNNI*MLNRNE
Trigger: CTCATTCCGGTTCAACATCAATATGTTGTTACATCG...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp CTCCATTGTTCTTTTCCCTACTTGCTGACAGGTTTTGACAAGAACACGATTCACGGACCATTGACAACATaGATGATGTCAGCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: LHCSFPYLLTGFDKNTIHGPLTT*MMSAFF
Trigger: GAAAAAGGCTGACATCATCAATGTTGTCAATGGTCC...GTGAATCGTGTTCTTGTCAAAACCTGTCAGCAAGTAGGGAAAAGAACAATGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000523732.1
CDS-3UTR CAA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCTACGTGATAGGACCATaGACAACATTGATGATGTCA +
Preference number: 5 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVYVIGP*TTLMMS
Trigger: TGACATCATCAATGTTGTCAATGGTCCTATCACGTA...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp CCATTTGCCATAGCGATTAGGATCCAATTCTATCAGATCAAAAGGAGGTTCTCCATCCATATGATTCTCTaGCTTTGGCCTCAGTGTACT +
Preference number: 5 (lower is better)
Translates to: PFAIAIRIQFYQIKRRFSIHMIL*LWPQCT
Trigger: AGTACACTGAGGCCAAAGCAAGAGAATCATATGGAT...GGAGAACCTCCTTTTGATCTGATAGAATTGGATCCTAATCGCTATGGCAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp TCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCAGTTACCGCTACTCTTaGCATAACCTGTTTATACTC +
Preference number: 5 (lower is better)
Translates to: SWFPLFPWEPVIIISRTVSYRYS*HNLFIL
Trigger: GAGTATAAACAGGTTATGCAAAGAGTAGCGGTAACT...GACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp TATTCCAGTCCAGCTTCCAAAGGATTTGTATCACAGTTCATCTCTAACCCCCAGACATCATATCCACCTTaGACTGCTTCTTCTTCAATC +
Preference number: 5 (lower is better)
Translates to: YSSPASKGFVSQFISNPQTSYPP*TASSSI
Trigger: GATTGAAGAAGAAGCAGTCAAAGGTGGATATGATGT...CTGGGGGTTAGAGATGAACTGTGATACAAATCCTTTGGAAGCTGGACTGGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCGCAGTGACAGGAATGTaGGAAACCTTTAAGGACTTG +
Preference number: 5 (lower is better)
Translates to: FPLFPWEPVIIISRTVISAVTGM*ETFKDL
Trigger: CAAGTCCTTAAAGGTTTCCAACATTCCTGTCACTGC...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp CCATTTGCCATAGCGATTAGGATCCAATTCTATCAGATCAAAAGGAGGTTCTCCTACGTGATAGGACCATaGACAACATTGATGATGTCA +
Preference number: 5 (lower is better)
Translates to: PFAIAIRIQFYQIKRRFSYVIGP*TTLMMS
Trigger: TGACATCATCAATGTTGTCAATGGTCCTATCACGTA...GGAGAACCTCCTTTTGATCTGATAGAATTGGATCCTAATCGCTATGGCAAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS-3UTR CAA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGTATGATTCTCTTGCTTaGGCCTCAGTGTACTGGGTT +
Preference number: 5 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKYDSLA*ASVYWV
Trigger: AACCCAGTACACTGAGGCCAAAGCAAGAGAATCATA...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCAATCTGTTTCAGTGCTaGCTTTCCTATGAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: FPLFPWEPVIIISRTVISNLFQC*LSYEVC
Trigger: GCAGACTTCATAGGAAAGCAAGCACTGAAACAGATT...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCCAATACCAAAGGTTCTaGTATGATGACTGCTGGGTA +
Preference number: 5 (lower is better)
Translates to: FPLFPWEPVIIISRTVISQYQRF*YDDCWV
Trigger: TACCCAGCAGTCATCATACAAGAACCTTTGGTATTG...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCAACAACATATTGATGTaGAACCGGAATGAGAGGATG +
Preference number: 5 (lower is better)
Translates to: FPLFPWEPVIIISRTVISNNILM*NRNERM
Trigger: CATCCTCTCATTCCGGTTCAACATCAATATGTTGTT...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGGACCATTGACAACATaGATGATGTCAGCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKGPLTT*MMSAFF
Trigger: GAAAAAGGCTGACATCATCAATGTTGTCAATGGTCC...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGATCCATATGATTCTCTaGCTTTGGCCTCAGTGTACT +
Preference number: 5 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKIHMIL*LWPQCT
Trigger: AGTACACTGAGGCCAAAGCAAGAGAATCATATGGAT...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCCCTTTGATGTTAAACTaGCCAAATGGTGATAGGTCA +
Preference number: 5 (lower is better)
Translates to: FPLFPWEPVIIISRTVISPLMLN*PNGDRS
Trigger: TGACCTATCACCATTTGGCAAGTTTAACATCAAAGG...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCACATCATATCCACCTTaGACTGCTTCTTCTTCAATC +
Preference number: 5 (lower is better)
Translates to: FPLFPWEPVIIISRTVISTSYPP*TASSSI
Trigger: GATTGAAGAAGAAGCAGTCAAAGGTGGATATGATGT...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp TTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGGACAGTCATTAGCGCCAGTCCGAGTCATTaGATATTTAAATTCATCTAC +
Preference number: 5 (lower is better)
Translates to: FPLFPWEPVIIISRTVISASPSH*IFKFIY
Trigger: GTAGATGAATTTAAATATCAAATGACTCGGACTGGC...GCTAATGACTGTCCTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp AATGAATTCCTGGTTTCCTCTATTCCCCTGGGAGCCAGTTATAATAATTTCAAGCAGCTTCCAAAGGATTaGTATCACAGTTCATCTCTA +
Preference number: 5 (lower is better)
Translates to: NEFLVSSIPLGASYNNFKQLPKD*YHSSSL
Trigger: TAGAGATGAACTGTGATACAAATCCTTTGGAAGCTG...CTTGAAATTATTATAACTGGCTCCCAGGGGAATAGAGGAAACCAGGAATTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS-3UTR CAA 90 bp TTTGCAAAGAGATGGTCCAGTAGTCTAATGGAATCTTGGCCTTTGATGTTAAACCAGCTTCCAAAGGATTaGTATCACAGTTCATCTCTA +
Preference number: 5 (lower is better)
Translates to: FAKRWSSSLMESWPLMLNQLPKD*YHSSSL
Trigger: TAGAGATGAACTGTGATACAAATCCTTTGGAAGCTG...GTTTAACATCAAAGGCCAAGATTCCATTAGACTACTGGACCATCTCTTTGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517853.5
ENST00000518477.5
CDS-3UTR CAA 90 bp CATTTAGATCTATGGGTTAGCAAGGTGTCTAATCAGCGGTACTTAATAAATGTCTGTTCTTTTCCCTACTaGCTGACAGGTTTTGACAAG +
Preference number: 5 (lower is better)
Translates to: HLDLWVSKVSNQRYLINVCSFPY*LTGFDK
Trigger: CTTGTCAAAACCTGTCAGCAAGTAGGGAAAAGAACA...GACATTTATTAAGTACCGCTGATTAGACACCTTGCTAACCCATAGATCTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523732.1
CDS-3UTR CAA 90 bp TTCAGATATAGTCGATGTAACAACATATTGATGTTGAACCGGAATGAGAGGATGAACAACATATTGATGTaGAACCGGAATGAGAGGATG +
Preference number: 5 (lower is better)
Translates to: FRYSRCNNILMLNRNERMNNILM*NRNERM
Trigger: CATCCTCTCATTCCGGTTCAACATCAATATGTTGTT...CATCCTCTCATTCCGGTTCAACATCAATATGTTGTTACATCGACTATATCTGAA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518477.5
ENST00000521052.5
CDS-3UTR CAA 90 bp TTCAGATATAGTCGATGTAACAACATATTGATGTTGAACCGGAATGAGAGGATGACATCATATCCACCTTaGACTGCTTCTTCTTCAATC +
Preference number: 5 (lower is better)
Translates to: FRYSRCNNILMLNRNERMTSYPP*TASSSI
Trigger: GATTGAAGAAGAAGCAGTCAAAGGTGGATATGATGT...CATCCTCTCATTCCGGTTCAACATCAATATGTTGTTACATCGACTATATCTGAA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518477.5
CDS TCA 90 bp ATCCCACCACCTGACCAGTTTCTTCTTCCAGTTTCTCATAAAGTTTaGTGCTATCATAATGTATTTTCTTCAAGTTTATTCCAGGATGAA +
Preference number: 5 (lower is better)
Translates to: IPPPDQFLLPVSHKV*CYHNVFSSSLFQDE
Trigger: TTCATCCTGGAATAAACTTGAAGAAAATACATTATGATAGCATCAAACTTTATGAGAAACTGGAAGAAGAAACTGGTCAGGTGGTGGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255189.8
ENST00000524206.1
CDS GCA 72 bp AGCGGGCAGCTCCGCAGCAGGAGGCCCCGCAGCAGCTaGGCGCCGGGACGGAGCATGACTAGGCCGAGGCCG +
Preference number: 6 (lower is better)
Translates to: SGQLRSRRPRSS*APGRSMTRPRP
Trigger: CGGCCTCGGCCTAGTCATGCTCCGTCCCGGCGCGCAGCTGCTGCGGGGCCTCCTGCTGCGGAGCTGCCCGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255189.8
ENST00000521052.5
CDS GCA 72 bp CTTAGTTCCTCTTTTCCCGGGTTCGGAGGCCACCTGTaGAGCAGGGCACACCTGCCACTCTCATCGCCCTCG +
Preference number: 6 (lower is better)
Translates to: LSSSFPGFGGHL*SRAHLPLSSPS
Trigger: CGAGGGCGATGAGAGTGGCAGGTGTGCCCTGCTGCACAGGTGGCCTCCGAACCCGGGAAAAGAGGAACTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518707.1
ENST00000520388.5
ENST00000520855.1
CDS GCA 72 bp CCATGTGCATTGGCCCAGAAGGAGATTTGCATGGCGTaGCCCCCGGCGAGTGTGCAGTGCGCCTGGAATTCG +
Preference number: 6 (lower is better)
Translates to: PCALAQKEICMA*PPASVQCAWNS
Trigger: CGAATTCCAGGCGCACTGCACACTCGCCGGGGGGCACGCCATGCAAATCTCCTTCTGGGCCAATGCACATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518707.1
ENST00000520388.5
CDS TCA 72 bp GGAGAACCATTTGAACCCGGGAGGCGGAGATTGCAGTaGGCTGGGATTGCACCACACTTCAGCCTGGGCGGC +
Preference number: 6 (lower is better)
Translates to: GEPFEPGRRRLQ*AGIAPHFSLGG
Trigger: GCCGCCCAGGCTGAAGTGTGGTGCAATCCCAGCTCACTGCAATCTCCGCCTCCCGGGTTCAAATGGTTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520855.1
CDS CCA 72 bp GGAGGATCGTATCAGGCCAGGAATTCCAGTCCATCCTaGGCAATGCAGGGAGACCCCGTCTCCATTTTAGGG +
Preference number: 6 (lower is better)
Translates to: GGSYQARNSSPS*AMQGDPVSILG
Trigger: CCCTAAAATGGAGACGGGGTCTCCCTGCATTGCCCAGGATGGACTGGAATTCCTGGCCTGATACGATCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520388.5
CDS GCA 72 bp TTGATAGCATCCGGTAAACCTGTGGCAGCAACCATGTaGATTGGCCCAGAAGGAGATTTGCATGGCGTGCCC +
Preference number: 6 (lower is better)
Translates to: LIASGKPVAATM*IGPEGDLHGVP
Trigger: GGGCACGCCATGCAAATCTCCTTCTGGGCCAATGCACATGGTTGCTGCCACAGGTTTACCGGATGCTATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518707.1
ENST00000520388.5
CDS TCA 72 bp CATTTCCCTCTGGATCAACATCATCCGTTGCCAAGGTaGGGCAGACCAGTCTTCGTTTCAGCCCCTTGGCTT +
Preference number: 6 (lower is better)
Translates to: HFPLDQHHPLPR*GRPVFVSAPWL
Trigger: AAGCCAAGGGGCTGAAACGAAGACTGGTCTGCCTCACCTTGGCAACGGATGATGTTGATCCAGAGGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS CAA 72 bp GACATCGCCCGACAAGTGGCTGATGAAGGAGATGCTTaGGTAGCAGGAGGAGTGAGTCAGACACCTTCATAC +
Preference number: 6 (lower is better)
Translates to: DIARQVADEGDA*VAGGVSQTPSY
Trigger: GTATGAAGGTGTCTGACTCACTCCTCCTGCTACCAAAGCATCTCCTTCATCAGCCACTTGTCGGGCGATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518707.1
ENST00000520388.5
CDS CAA 90 bp GCTGCTTGCGACATCGCCCGACAAGTGGCTGATGAAGGAGATGCTTaGGTAGCAGGAGGAGTGAGTCAGACACCTTCATACCTTAGCTTA +
Preference number: 6 (lower is better)
Translates to: AACDIARQVADEGDA*VAGGVSQTPSYLSL
Trigger: TAAGCTAAGGTATGAAGGTGTCTGACTCACTCCTCCTGCTACCAAAGCATCTCCTTCATCAGCCACTTGTCGGGCGATGTCGCAAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518707.1
ENST00000520388.5
CDS CCA 72 bp ATCCAGTCACTGAGATATTTCCCTACCCCACCAGCGTaGATTATGCCATATTGCGTGCCAGGTAGATCCAGC +
Preference number: 6 (lower is better)
Translates to: IQSLRYFPTPPA*IMPYCVPGRSS
Trigger: GCTGGATCTACCTGGCACGCAATATGGCATAATCCACGCTGGTGGGGTAGGGAAATATCTCAGTGACTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517853.5
CDS CAA 72 bp GCCAAGGTGAGGCAGACCAGTCTTCGTTTCAGCCCCTaGGCTTTAATCTGTTTCAGTGCTTGCTTTCCTATG +
Preference number: 6 (lower is better)
Translates to: AKVRQTSLRFSP*ALICFSACFPM
Trigger: CATAGGAAAGCAAGCACTGAAACAGATTAAAGCCAAGGGGCTGAAACGAAGACTGGTCTGCCTCACCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS CAA 90 bp TCATCCGTTGCCAAGGTGAGGCAGACCAGTCTTCGTTTCAGCCCCTaGGCTTTAATCTGTTTCAGTGCTTGCTTTCCTATGAAGTCTGCT +
Preference number: 6 (lower is better)
Translates to: SSVAKVRQTSLRFSP*ALICFSACFPMKSA
Trigger: AGCAGACTTCATAGGAAAGCAAGCACTGAAACAGATTAAAGCCAAGGGGCTGAAACGAAGACTGGTCTGCCTCACCTTGGCAACGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS GCA 72 bp GTACAGGGACATATGCGAAAGCCAGACTCTTCTGGATaGTGTAGCTATAGCTTCCAGATGTCGTGTTGCCAA +
Preference number: 6 (lower is better)
Translates to: VQGHMRKPDSSG*CSYSFQMSCCQ
Trigger: TTGGCAACACGACATCTGGAAGCTATAGCTACAGCATCCAGAAGAGTCTGGCTTTCGCATATGTCCCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255189.8
CDS GCA 72 bp ATGTCGTGTTGCCAACCACCTTGCCATTGTACCAGATaGTTTCATTTCCCTCTGGATCAACATCATCCGTTG +
Preference number: 6 (lower is better)
Translates to: MSCCQPPCHCTR*FHFPLDQHHPL
Trigger: CAACGGATGATGTTGATCCAGAGGGAAATGAAAGCATCTGGTACAATGGCAAGGTGGTTGGCAACACGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255189.8