RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DMBX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000197587

Ensembl transcript IDs: ENST00000360032.4, ENST00000371956.8

Found 425 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAGGTTGGCCCAGCAGGCCTGGGAGGGGCTCCAGCATCAGGTGTaGTGGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCT +
Preference number: 1 (lower is better)
Translates to: PRLAQQAWEGLQHQV*WACTLCPQEGKRGA
Trigger: AGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTGATGCTGGAGCCCCTCCCAGGCCTGCTGGGCCAACCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CCA 90 bp AGGTTGGCCCAGCAGGCCTGGGAGGGGCTCCAGCATCAGGTGTGGTaGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCTGCT +
Preference number: 1 (lower is better)
Translates to: RLAQQAWEGLQHQVW*ACTLCPQEGKRGAA
Trigger: AGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTGATGCTGGAGCCCCTCCCAGGCCTGCTGGGCCAACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CCA 90 bp GAGCTTGAGCCTCTGGCTTTCAGGCCCAGGTTGGCCCAGCAGGCCTaGGAGGGGCTCCAGCATCAGGTGTGGTGGGCCTGTACCCTCTGC +
Preference number: 1 (lower is better)
Translates to: ELEPLAFRPRLAQQA*EGLQHQVWWACTLC
Trigger: GCAGAGGGTACAGGCCCACCACACCTGATGCTGGAGCCCCTCCCAGGCCTGCTGGGCCAACCTGGGCCTGAAAGCCAGAGGCTCAAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CCA 90 bp GGAAGGGACAGTCAGAGCTTGAGCCTCTGGCTTTCAGGCCCAGGTTaGCCCAGCAGGCCTGGGAGGGGCTCCAGCATCAGGTGTGGTGGG +
Preference number: 1 (lower is better)
Translates to: GRDSQSLSLWLSGPG*PSRPGRGSSIRCGG
Trigger: CCCACCACACCTGATGCTGGAGCCCCTCCCAGGCCTGCTGGGCCAACCTGGGCCTGAAAGCCAGAGGCTCAAGCTCTGACTGTCCCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 90 bp CTCACCTCCTCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATaGAGAGGGTGTGTAGGTGTGGGCTTCACCTCGGGCTGGGGTATG +
Preference number: 1 (lower is better)
Translates to: LTSSLFGLHGVQAGP*RGCVGVGFTSGWGM
Trigger: CATACCCCAGCCCGAGGTGAAGCCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGAGGAGGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR GCA 90 bp GCCTGGGAGGGGCTCCAGCATCAGGTGTGGTGGGCCTGTACCCTCTaGCCACAAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAG +
Preference number: 1 (lower is better)
Translates to: AWEGLQHQVWWACTL*PQEGKRGAAYKRAQ
Trigger: CTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTGATGCTGGAGCCCCTCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR TCA 90 bp GGAGAGGCCAGGCATGAGGCATTCCTGGAAGGGACAGTCAGAGCTTaGGCCTCTGGCTTTCAGGCCCAGGTTGGCCCAGCAGGCCTGGGA +
Preference number: 1 (lower is better)
Translates to: GEARHEAFLEGTVRA*ASGFQAQVGPAGLG
Trigger: TCCCAGGCCTGCTGGGCCAACCTGGGCCTGAAAGCCAGAGGCTCAAGCTCTGACTGTCCCTTCCAGGAATGCCTCATGCCTGGCCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 90 bp GTGGTGGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCTaGTTACAAGCGTGCTCAGAGGAGATGCACGGTGCCGCTTACCAG +
Preference number: 1 (lower is better)
Translates to: VVGLYPLPTRREARC*LQACSEEMHGAAYQ
Trigger: CTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 90 bp GGTGTGGTGGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTaGTGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCCGCTTAC +
Preference number: 1 (lower is better)
Translates to: GVVGLYPLPTRREAR*CLQACSEEMHGAAY
Trigger: GTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 90 bp TACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTaGTCAGAGGAGATGCACGGTGCCGCTTACCAGTGTGCTTGGAGG +
Preference number: 1 (lower is better)
Translates to: YPLPTRREARCCLQA*SEEMHGAAYQCAWR
Trigger: CCTCCAAGCACACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR TCA 90 bp CCTGGAATCTGCCAACCTCCCACAGCGCTGCCTAAGTCTCTCCTCTaGTGCCCCCATGGCTGGTGGATTCCCCTTCCAAATTCCAGACCC +
Preference number: 1 (lower is better)
Translates to: PGICQPPTALPKSLL*CPHGWWIPLPNSRP
Trigger: GGGTCTGGAATTTGGAAGGGGAATCCACCAGCCATGGGGGCATCAGAGGAGAGACTTAGGCAGCGCTGTGGGAGGTTGGCAGATTCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 90 bp GTCCTCTCCTCTTGCTCTCCAGCTGCTTTCAGTACCCAAGGCTGGTaGCCTAAACTTGAGAGCCCTCCGAGGGCAGGGACCACATGTACC +
Preference number: 1 (lower is better)
Translates to: VLSSCSPAAFSTQGW*PKLESPPRAGTTCT
Trigger: GGTACATGTGGTCCCTGCCCTCGGAGGGCTCTCAAGTTTAGGGCACCAGCCTTGGGTACTGAAAGCAGCTGGAGAGCAAGAGGAGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 90 bp CAAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATaGACGGTGCCGCTTACCAGTGTGCTTGGAGGAGACACAGGTGTC +
Preference number: 1 (lower is better)
Translates to: QEGKRGAAYKRAQRR*TVPLTSVLGGDTGV
Trigger: GACACCTGTGTCTCCTCCAAGCACACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CCA 90 bp GGTGTCCTCTCCTCTTGCTCTCCAGCTGCTTTCAGTACCCAAGGCTaGTGCCCTAAACTTGAGAGCCCTCCGAGGGCAGGGACCACATGT +
Preference number: 1 (lower is better)
Translates to: GVLSSCSPAAFSTQG*CPKLESPPRAGTTC
Trigger: ACATGTGGTCCCTGCCCTCGGAGGGCTCTCAAGTTTAGGGCACCAGCCTTGGGTACTGAAAGCAGCTGGAGAGCAAGAGGAGAGGACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 90 bp CTTACAAGCGTGCTCAGAGGAGATGCACGGTGCCGCTTACCAGTGTaGTTGGAGGAGACACAGGTGTCCTCTCCTCTTGCTCTCCAGCTG +
Preference number: 1 (lower is better)
Translates to: LTSVLRGDARCRLPV*LEETQVSSPLALQL
Trigger: CAGCTGGAGAGCAAGAGGAGAGGACACCTGTGTCTCCTCCAAGCACACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTGTAAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CCA 90 bp CCCTGTGGTCAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTTaGGAAGACTTACAGGCAGGAATGCTGGCCATTCTACTGCCTTCC +
Preference number: 1 (lower is better)
Translates to: PCGQSWLNCVTGPLS*EDLQAGMLAILLPS
Trigger: GGAAGGCAGTAGAATGGCCAGCATTCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR CCA 90 bp CTCTCCATCCAGGGAAGTCTCACCAAAGAGAGCTCTAGAGCCCTGTaGTCAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTTGGGA +
Preference number: 1 (lower is better)
Translates to: LSIQGSLTKESSRAL*SVLAELCHRASVLG
Trigger: TCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGCTCTCTTTGGTGAGACTTCCCTGGATGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR CCA 90 bp CAAGCGTGCTCAGAGGAGATGCACGGTGCCGCTTACCAGTGTGCTTaGAGGAGACACAGGTGTCCTCTCCTCTTGCTCTCCAGCTGCTTT +
Preference number: 1 (lower is better)
Translates to: QACSEEMHGAAYQCA*RRHRCPLLLLSSCF
Trigger: AAAGCAGCTGGAGAGCAAGAGGAGAGGACACCTGTGTCTCCTCCAAGCACACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 90 bp GCTCAGGAGCAGAGTTCAACCTTCATTCCTGGTCAGCCGTACCCCTaGCTTGGACAGTATCTGCTGAACGTGGAGGCTCAGCTTGTGGGA +
Preference number: 1 (lower is better)
Translates to: AQEQSSTFIPGQPYP*LGQYLLNVEAQLVG
Trigger: TCCCACAAGCTGAGCCTCCACGTTCAGCAGATACTGTCCAAGGCAGGGGTACGGCTGACCAGGAATGAAGGTTGAACTCTGCTCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR TCA 90 bp AGCCCCACCTCTCGTGAAGCCAGCCACCCCCTTCCCATGGTCTACTaGGTCTCATCTCTGCTGCTTTGTTCAAACACTTCTCCTGGCCTA +
Preference number: 1 (lower is better)
Translates to: SPTSREASHPLPMVY*VSSLLLCSNTSPGL
Trigger: TAGGCCAGGAGAAGTGTTTGAACAAAGCAGCAGAGATGAGACTCAGTAGACCATGGGAAGGGGGTGGCTGGCTTCACGAGAGGTGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CCA 90 bp AGGGAAGTCTCACCAAAGAGAGCTCTAGAGCCCTGTGGTCAGTCCTaGCTGAACTGTGTCACCGGGCCTCTGTCTTGGGAAGACTTACAG +
Preference number: 1 (lower is better)
Translates to: REVSPKRALEPCGQS*LNCVTGPLSWEDLQ
Trigger: CTGTAAGTCTTCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGCTCTCTTTGGTGAGACTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR CCA 90 bp GGAGCAGAGTTCAACCTTCATTCCTGGTCAGCCGTACCCCTGCCTTaGACAGTATCTGCTGAACGTGGAGGCTCAGCTTGTGGGAGAAGA +
Preference number: 1 (lower is better)
Translates to: GAEFNLHSWSAVPLP*TVSAERGGSACGRR
Trigger: TCTTCTCCCACAAGCTGAGCCTCCACGTTCAGCAGATACTGTCCAAGGCAGGGGTACGGCTGACCAGGAATGAAGGTTGAACTCTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR TCA 90 bp CATCTGCCCCAGCCTAGGCTGACCCCCATCAAGGGTGATGGGCATTaGCTTCTCTGCAAAGCAATTCAACCAGGACACCAACAGAACCTC +
Preference number: 1 (lower is better)
Translates to: HLPQPRLTPIKGDGH*LLCKAIQPGHQQNL
Trigger: GAGGTTCTGTTGGTGTCCTGGTTGAATTGCTTTGCAGAGAAGTCAATGCCCATCACCCTTGATGGGGGTCAGCCTAGGCTGGGGCAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 90 bp ATTGGCTCTGGGACAGGAAGCCTACAGAAGCCTGAGCCTATGTGCTaGTATATGCTTTGCACGCACCGTGCTCAGGAGCAGAGTTCAACC +
Preference number: 1 (lower is better)
Translates to: IGSGTGSLQKPEPMC*YMLCTHRAQEQSST
Trigger: GGTTGAACTCTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGCAGCACATAGGCTCAGGCTTCTGTAGGCTTCCTGTCCCAGAGCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR CCA 90 bp CCATGGGCTGGCACGACCTCTAAGCACAAATGGTCACAAAACAGCTaGTTTGGAAAGCAGTCTGTAGAGCCCACCAGCCTTGGAGTTGGG +
Preference number: 1 (lower is better)
Translates to: PWAGTTSKHKWSQNS*FGKQSVEPTSLGVG
Trigger: CCCAACTCCAAGGCTGGTGGGCTCTACAGACTGCTTTCCAAACCAGCTGTTTTGTGACCATTTGTGCTTAGAGGTCGTGCCAGCCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR TCA 90 bp GGCTGGTGGATTCCCCTTCCAAATTCCAGACCCCAGCAAGAGACCTaGGGATTTGGAAACCCTCAAATGCCTGTCTTGGTGCTTGCCACA +
Preference number: 1 (lower is better)
Translates to: GWWIPLPNSRPQQET*GFGNPQMPVLVLAT
Trigger: TGTGGCAAGCACCAAGACAGGCATTTGAGGGTTTCCAAATCCTCAGGTCTCTTGCTGGGGTCTGGAATTTGGAAGGGGAATCCACCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 90 bp CTGGGACAGGAAGCCTACAGAAGCCTGAGCCTATGTGCTGCTATATaGTTTGCACGCACCGTGCTCAGGAGCAGAGTTCAACCTTCATTC +
Preference number: 1 (lower is better)
Translates to: LGQEAYRSLSLCAAI*FARTVLRSRVQPSF
Trigger: GAATGAAGGTTGAACTCTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGCAGCACATAGGCTCAGGCTTCTGTAGGCTTCCTGTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR TCA 90 bp CCTTACTTCCATAATTGGCTCTGGGACAGGAAGCCTACAGAAGCCTaGGCCTATGTGCTGCTATATGCTTTGCACGCACCGTGCTCAGGA +
Preference number: 1 (lower is better)
Translates to: PYFHNWLWDRKPTEA*AYVLLYALHAPCSG
Trigger: TCCTGAGCACGGTGCGTGCAAAGCATATAGCAGCACATAGGCTCAGGCTTCTGTAGGCTTCCTGTCCCAGAGCCAATTATGGAAGTAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR GCA 90 bp ACAGGAAGCCTACAGAAGCCTGAGCCTATGTGCTGCTATATGCTTTaGACGCACCGTGCTCAGGAGCAGAGTTCAACCTTCATTCCTGGT +
Preference number: 1 (lower is better)
Translates to: TGSLQKPEPMCCYML*THRAQEQSSTFIPG
Trigger: ACCAGGAATGAAGGTTGAACTCTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGCAGCACATAGGCTCAGGCTTCTGTAGGCTTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR GCA 90 bp AGCAAGAGACCTGAGGATTTGGAAACCCTCAAATGCCTGTCTTGGTaGTTGCCACATGTAGGTGTGGTCTTTAGCCTGGATTCCAGGCCC +
Preference number: 1 (lower is better)
Translates to: SKRPEDLETLKCLSW*LPHVGVVFSLDSRP
Trigger: GGGCCTGGAATCCAGGCTAAAGACCACACCTACATGTGGCAAGCACCAAGACAGGCATTTGAGGGTTTCCAAATCCTCAGGTCTCTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CCA 90 bp TACACAGTGTCTTTGCCATGGGCTGGCACGACCTCTAAGCACAAATaGTCACAAAACAGCTGGTTTGGAAAGCAGTCTGTAGAGCCCACC +
Preference number: 1 (lower is better)
Translates to: YTVSLPWAGTTSKHK*SQNSWFGKQSVEPT
Trigger: GGTGGGCTCTACAGACTGCTTTCCAAACCAGCTGTTTTGTGACCATTTGTGCTTAGAGGTCGTGCCAGCCCATGGCAAAGACACTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR TCA 90 bp AAGGGACCCATTATGCCTATGGGGAAACTGAGGCAGTGTCTACAGTaGGGCTTGTGTGTACAACACCCCTTGCTCCACAGAAAGGCAATA +
Preference number: 1 (lower is better)
Translates to: KGPIMPMGKLRQCLQ*GLCVQHPLLHRKAI
Trigger: TATTGCCTTTCTGTGGAGCAAGGGGTGTTGTACACACAAGCCTCACTGTAGACACTGCCTCAGTTTCCCCATAGGCATAATGGGTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 90 bp CAGGCAGGAATGCTGGCCATTCTACTGCCTTCCCAGATTAACTACTaGCTCCTCAATCTTGGGAATGAGGACCTCAAAATTGAGAAGAGA +
Preference number: 1 (lower is better)
Translates to: QAGMLAILLPSQINY*LLNLGNEDLKIEKR
Trigger: TCTCTTCTCAATTTTGAGGTCCTCATTCCCAAGATTGAGGAGGCAGTAGTTAATCTGGGAAGGCAGTAGAATGGCCAGCATTCCTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR-3UTR TCA 90 bp CAGGTGTGGTGGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCTGCTGTGGTCAGTCCTGGCTaGACTGTGTCACCGGGCCTC +
Preference number: 2 (lower is better)
Translates to: QVWWACTLCPQEGKRGAAVVSPG*TVSPGL
Trigger: GAGGCCCGGTGACACAGTTCAGCCAGGACTGACCAC...AGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR GCA 90 bp CAGGTGTGGTGGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCTGCTGTCACTCCTGGAATCTaGCAACCTCCCACAGCGCTG +
Preference number: 2 (lower is better)
Translates to: QVWWACTLCPQEGKRGAAVTPGI*QPPTAL
Trigger: CAGCGCTGTGGGAGGTTGGCAGATTCCAGGAGTGAC...AGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR TCA 90 bp TGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCCGCTTACCAGTGTGCTTGGTGCCCCAGCCTAGGCTaGCCCCCATCAAGGGTGATG +
Preference number: 2 (lower is better)
Translates to: CLQACSEEMHGAAYQCAWCPSLG*PPSRVM
Trigger: CATCACCCTTGATGGGGGTCAGCCTAGGCTGGGGCA...CCAAGCACACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR GCA 90 bp CTGGCTGAACTGTGTCACCGGGCCTCTGTCTTGGGAAGACTTACAGGCAGGAATGGGAGTGGGAGCCAGTaGCACCTCCTGCCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: LAELCHRASVLGRLTGRNGSGSQ*HLLPAA
Trigger: AGCTGCAGGCAGGAGGTGGCACTGGCTCCCACTCCC...ATTCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR CAA 90 bp CTTGCTCTCCAGCTGCTTTCAGTACCCAAGGCTGGTGCCCTAAACTaGAGAGCCCTCCGAGGGCAGGGACCACATGTACCTTCCCTGCCT +
Preference number: 2 (lower is better)
Translates to: LALQLLSVPKAGALN*RALRGQGPHVPSLP
Trigger: AGGCAGGGAAGGTACATGTGGTCCCTGCCCTCGGAGGGCTCTCAAGTTTAGGGCACCAGCCTTGGGTACTGAAAGCAGCTGGAGAGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR TCA 90 bp GCTCTAGAGCCCTGTGGTCAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTGGGAGGAGGTGCTATTaGGATGAGGATCTAGCCAGG +
Preference number: 2 (lower is better)
Translates to: ALEPCGQSWLNCVTGPLSGRRCY*DEDLAR
Trigger: CCTGGCTAGATCCTCATCTCAATAGCACCTCCTCCC...AGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR-3UTR GCA 90 bp CTGGCTGAACTGTGTCACCGGGCCTCTGTCTTGGGAAGACTTACAGGCAGGAATGTGCCACCTCCTGCCTaGAGCTCCAGATCCCCAGAG +
Preference number: 2 (lower is better)
Translates to: LAELCHRASVLGRLTGRNVPPPA*SSRSPE
Trigger: CTCTGGGGATCTGGAGCTGCAGGCAGGAGGTGGCAC...ATTCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR CAA 90 bp GCCCTGTGGTCAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTaGGGAAGACTTACAGGCAGGAATGCTGGCCATTCTACTGCCTTC +
Preference number: 2 (lower is better)
Translates to: ALWSVLAELCHRASV*GRLTGRNAGHSTAF
Trigger: GAAGGCAGTAGAATGGCCAGCATTCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR CAA 90 bp ACAAGCGTGCTCAGAGGAGATGCACGGTGCCGCTTACCAGTGTGCTaGGAGGAGACACAGGTGTCCTCTCCTCTTGCTCTCCAGCTGCTT +
Preference number: 2 (lower is better)
Translates to: TSVLRGDARCRLPVC*EETQVSSPLALQLL
Trigger: AAGCAGCTGGAGAGCAAGAGGAGAGGACACCTGTGTCTCCTCCAAGCACACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CCA 90 bp CAGGTGTGGTGGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCTGCTTCCAGAGGCTGGCACTaGAACTCAAGATCAAATCCA +
Preference number: 2 (lower is better)
Translates to: QVWWACTLCPQEGKRGAASRGWH*NSRSNP
Trigger: TGGATTTGATCTTGAGTTCCAGTGCCAGCCTCTGGA...AGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CCA 90 bp CACAAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGGCCACCCCCTTCCCATaGTCTACTGAGTCTCATCTC +
Preference number: 2 (lower is better)
Translates to: HKKGSAVLLTSVLRGDARATPFP*STESHL
Trigger: GAGATGAGACTCAGTAGACCATGGGAAGGGGGTGGC...CCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR TCA 90 bp CAGGTGTGGTGGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCTGCTCAAATCCAGATTGCCTaGACTAGAAGGGACCCATTA +
Preference number: 2 (lower is better)
Translates to: QVWWACTLCPQEGKRGAAQIQIA*TRRDPL
Trigger: TAATGGGTCCCTTCTAGTTCAGGCAATCTGGATTTG...AGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR GCA 90 bp CTGGAGGAGGTAGTGATATCTAAGGCTGTTGGATTCCAAGGCCTAGTGACAGTCGCCAGTGCCACCTCCTaGCTGCAGCTCCAGATCCCC +
Preference number: 2 (lower is better)
Translates to: LEEVVISKAVGFQGLVTVASATS*LQLQIP
Trigger: GGGGATCTGGAGCTGCAGGCAGGAGGTGGCACTGGC...GACTGTCACTAGGCCTTGGAATCCAACAGCCTTAGATATCACTACCTCCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CCA 90 bp TGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCCGCTTACCAGTGTGCTTGGTGCCCCCATGGCTGGTaGATTCCCCTTCCAAATTCC +
Preference number: 2 (lower is better)
Translates to: CLQACSEEMHGAAYQCAWCPHGW*IPLPNS
Trigger: GGAATTTGGAAGGGGAATCCACCAGCCATGGGGGCA...CCAAGCACACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CAA 90 bp CCTCCTGCCTGCAGCTCCAGATCCCCAGAGTCTCCAGCTAGGGCCTaGTTGCTTCTATTGGGCATAGAAAGGAACAGCTTCCTAGAGAGG +
Preference number: 2 (lower is better)
Translates to: PPACSSRSPESPARA*LLLLGIERNSFLER
Trigger: CCTCTCTAGGAAGCTGTTCCTTTCTATGCCCAATAGAAGCAACAAGGCCCTAGCTGGAGACTCTGGGGATCTGGAGCTGCAGGCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR-3UTR TCA 90 bp CACAGGTGTCCTCTCCTCTTGCTCTCCAGCTGCTTTCAGTACCCAAGGCTGGTGACTTTTCCATTCCAGTaGCTAGCTGGAGGGAAGCCC +
Preference number: 2 (lower is better)
Translates to: HRCPLLLLSSCFQYPRLVTFPFQ*LAGGKP
Trigger: GGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGT...CACCAGCCTTGGGTACTGAAAGCAGCTGGAGAGCAAGAGGAGAGGACACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR TCA 90 bp CACAGGTGTCCTCTCCTCTTGCTCTCCAGCTGCTTTCAGTACCCAAGGCTGGTGCCCCAGCAAGAGACCTaGGGATTTGGAAACCCTCAA +
Preference number: 2 (lower is better)
Translates to: HRCPLLLLSSCFQYPRLVPQQET*GFGNPQ
Trigger: TTGAGGGTTTCCAAATCCTCAGGTCTCTTGCTGGGG...CACCAGCCTTGGGTACTGAAAGCAGCTGGAGAGCAAGAGGAGAGGACACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR GCA 90 bp CACAAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGCCTGAGCCTATGTGCTaGTATATGCTTTGCACGCAC +
Preference number: 2 (lower is better)
Translates to: HKKGSAVLLTSVLRGDARPEPMC*YMLCTH
Trigger: GTGCGTGCAAAGCATATAGCAGCACATAGGCTCAGG...CCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR GCA 90 bp CACAAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGCACATGTACCTTCCCTaGCTTCTCTGGCAGATTTGG +
Preference number: 2 (lower is better)
Translates to: HKKGSAVLLTSVLRGDARHMYLP*LLWQIW
Trigger: CCAAATCTGCCAGAGAAGGCAGGGAAGGTACATGTG...CCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CCA 90 bp TTTGGAGTGTTCAGTGGTGAGCCACCAAGAGTTGGGGAGCATGACCAAGAATCTCCTATTCGGCCTCCATaGGGTCCAGGCAGGGCCATG +
Preference number: 2 (lower is better)
Translates to: FGVFSGEPPRVGEHDQESPIRPP*GPGRAM
Trigger: CATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGG...AGATTCTTGGTCATGCTCCCCAACTCTTGGTGGCTCACCACTGAACACTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CCA 90 bp TCTGCCAACCTCCCACAGCGCTGCCTAAGTCTCTCCTCTGATGCCCCCATGGCTTTCAAACACTTCTCCTaGCCTAGACTACCATCCTGC +
Preference number: 2 (lower is better)
Translates to: SANLPQRCLSLSSDAPMAFKHFS*PRLPSC
Trigger: GCAGGATGGTAGTCTAGGCCAGGAGAAGTGTTTGAA...AGCCATGGGGGCATCAGAGGAGAGACTTAGGCAGCGCTGTGGGAGGTTGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CCA 90 bp CTGGCACGACCTCTAAGCACAAATGGTCACAAAACAGCTGGTTTGGAAAGCAGTCTTTCAGGCCCAGGTTaGCCCAGCAGGCCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: LARPLSTNGHKTAGLESSLSGPG*PSRPGR
Trigger: CCTCCCAGGCCTGCTGGGCCAACCTGGGCCTGAAAG...ACTGCTTTCCAAACCAGCTGTTTTGTGACCATTTGTGCTTAGAGGTCGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CCA 90 bp CTGGCACGACCTCTAAGCACAAATGGTCACAAAACAGCTGGTTTGGAAAGCAGTCACCAGCCTTGGAGTTaGGGTTGGGATCCGGGCCCC +
Preference number: 2 (lower is better)
Translates to: LARPLSTNGHKTAGLESSHQPWS*GWDPGP
Trigger: GGGGCCCGGATCCCAACCCCAACTCCAAGGCTGGTG...ACTGCTTTCCAAACCAGCTGTTTTGTGACCATTTGTGCTTAGAGGTCGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR TCA 90 bp TGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCCGCTTACCAGTGTGCTTGGAAGAGTTGGGGAGCATaGCCAAGAATCTGTCCAAGC +
Preference number: 2 (lower is better)
Translates to: CLQACSEEMHGAAYQCAWKSWGA*PRICPS
Trigger: GCTTGGACAGATTCTTGGTCATGCTCCCCAACTCTT...CCAAGCACACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR GCA 90 bp CTGGAGGAGGTAGTGATATCTAAGGCTGTTGGATTCCAAGGCCTAGTGACAGTCGTCCAGGCAGGGCCATaGAGAGGGTGTGTAGGTGTG +
Preference number: 2 (lower is better)
Translates to: LEEVVISKAVGFQGLVTVVQAGP*RGCVGV
Trigger: CACACCTACACACCCTCTGCATGGCCCTGCCTGGAC...GACTGTCACTAGGCCTTGGAATCCAACAGCCTTAGATATCACTACCTCCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR GCA 90 bp TTTGCTGAGCTGGGTTTCCTGGCTATGAACAGGAACACACTTTTCCATTCCAGTGCCAGTGCCACCTCCTaGCTGCAGCTCCAGATCCCC +
Preference number: 2 (lower is better)
Translates to: FAELGFLAMNRNTLFHSSASATS*LQLQIP
Trigger: GGGGATCTGGAGCTGCAGGCAGGAGGTGGCACTGGC...ACTGGAATGGAAAAGTGTGTTCCTGTTCATAGCCAGGAAACCCAGCTCAGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR-3UTR GCA 90 bp CACAAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGACTTACAGGCAGGAATaGTGGCCATTCTACTGCCTT +
Preference number: 2 (lower is better)
Translates to: HKKGSAVLLTSVLRGDARTYRQE*WPFYCL
Trigger: AAGGCAGTAGAATGGCCAGCATTCCTGCCTGTAAGT...CCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CCA 90 bp CTGGCACGACCTCTAAGCACAAATGGTCACAAAACAGCTGGTTTGGAAAGCAGTTCTCCGAGGGAAGCTTaGGGCACCCCAGCCTCTCAC +
Preference number: 2 (lower is better)
Translates to: LARPLSTNGHKTAGLESSSPREA*GTPASH
Trigger: GTGAGAGGCTGGGGTGCCCCAAGCTTCCCTCGGAGA...ACTGCTTTCCAAACCAGCTGTTTTGTGACCATTTGTGCTTAGAGGTCGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CCA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCTCTCCGAGGGAAGCTTaGGGCACCCCAGCCTCTCAC +
Preference number: 2 (lower is better)
Translates to: HFSIPVTSWREALTSIIGSPREA*GTPASH
Trigger: GTGAGAGGCTGGGGTGCCCCAAGCTTCCCTCGGAGA...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR-3UTR GCA 90 bp TGCTCTCCAGCTGCTTTCAGTACCCAAGGCTGGTGCCCTAAACTTGAGAGCCCTCTATGTGCTGCTATATaGTTTGCACGCACCGTGCTC +
Preference number: 2 (lower is better)
Translates to: CSPAAFSTQGWCPKLESPLCAAI*FARTVL
Trigger: GAGCACGGTGCGTGCAAAGCATATAGCAGCACATAG...AGGGCTCTCAAGTTTAGGGCACCAGCCTTGGGTACTGAAAGCAGCTGGAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR GCA 90 bp CATTATGCCTATGGGGAAACTGAGGCAGTGTCTACAGTGAGGCTTGTGTGTACAAGGTGTGAGCCACCATaGCCAGCCGGTCACACAGCT +
Preference number: 2 (lower is better)
Translates to: HYAYGETEAVSTVRLVCTRCEPP*PAGHTA
Trigger: AGCTGTGTGACCGGCTGGGCATGGTGGCTCACACCT...TGTACACACAAGCCTCACTGTAGACACTGCCTCAGTTTCCCCATAGGCATAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CCA 90 bp GCTATATGCTTTGCACGCACCGTGCTCAGGAGCAGAGTTCAACCTTCATTCCTGACCGGGCCTCTGTCTTaGGAAGACTTACAGGCAGGA +
Preference number: 2 (lower is better)
Translates to: AICFARTVLRSRVQPSFLTGPLS*EDLQAG
Trigger: TCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGT...CAGGAATGAAGGTTGAACTCTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR-3UTR CCA 90 bp TGGATTCCAAGGCCTAGTGACAGTCACTTGTACCCAGGAACTGACAAAAAGCTTCCTCTGATGCCCCCATaGCTGGTGGATTCCCCTTCC +
Preference number: 2 (lower is better)
Translates to: WIPRPSDSHLYPGTDKKLPLMPP*LVDSPS
Trigger: GGAAGGGGAATCCACCAGCCATGGGGGCATCAGAGG...AAGCTTTTTGTCAGTTCCTGGGTACAAGTGACTGTCACTAGGCCTTGGAATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CAA 90 bp TTCTTTAAGCAGGGTTTGGAGTGTTCAGTGGTGAGCCACCAAGAGTaGGGGAGCATGACCAAGAATCTGTCCAAGCCATCACCTCCCACT +
Preference number: 2 (lower is better)
Translates to: FFKQGLECSVVSHQE*GSMTKNLSKPSPPT
Trigger: AGTGGGAGGTGATGGCTTGGACAGATTCTTGGTCATGCTCCCCAACTCTTGGTGGCTCACCACTGAACACTCCAAACCCTGCTTAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR TCA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCGGGAGGAGGTGCTATTaGGATGAGGATCTAGCCAGG +
Preference number: 2 (lower is better)
Translates to: HFSIPVTSWREALTSIIGGRRCY*DEDLAR
Trigger: CCTGGCTAGATCCTCATCTCAATAGCACCTCCTCCC...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR-3UTR TCA 90 bp GTAAGACAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACACCTAAGTCTCTCCTCTaGTGCCCCCATGGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: VRQRTGHNITGNETDRRTPKSLL*CPHGWW
Trigger: CCACCAGCCATGGGGGCATCAGAGGAGAGACTTAGG...TGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTGTCTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR GCA 90 bp TGGATTCCAAGGCCTAGTGACAGTCACTTGTACCCAGGAACTGACAAAAAGCTTCCTCAGGTGATTGCCTaGCTTGGCCTCCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: WIPRPSDSHLYPGTDKKLPQVIA*LGLPKC
Trigger: GCACTTTGGGAGGCCAAGGCAGGCAATCACCTGAGG...AAGCTTTTTGTCAGTTCCTGGGTACAAGTGACTGTCACTAGGCCTTGGAATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CCA 90 bp GCCTTGTTGCTTCTATTGGGCATAGAAAGGAACAGCTTCCTAGAGAGGCCGCAGGAGAAAGATCAAGGGTaGAGAATACAGAGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: ALLLLLGIERNSFLERPQEKDQG*RIQRLG
Trigger: GCCCAGCCTCTGTATTCTCCACCCTTGATCTTTCTC...CTGCGGCCTCTCTAGGAAGCTGTTCCTTTCTATGCCCAATAGAAGCAACAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR CAA 90 bp GGACCACATGTACCTTCCCTGCCTTCTCTGGCAGATTTGGGTCAATaGAATGGGACAAGTGTTAACAAACATCTGAGGGAAGCTCGGCTG +
Preference number: 2 (lower is better)
Translates to: GPHVPSLPSLADLGQ*NGTSVNKHLREARL
Trigger: CAGCCGAGCTTCCCTCAGATGTTTGTTAACACTTGTCCCATTCAATTGACCCAAATCTGCCAGAGAAGGCAGGGAAGGTACATGTGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR TCA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCGAGGTGCTATTGAGATaGGGATCTAGCCAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: HFSIPVTSWREALTSIIGEVLLR*GSSQGE
Trigger: CTCTCCCTGGCTAGATCCTCATCTCAATAGCACCTC...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR-3UTR TCA 90 bp GTAAGACAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACACCCTGGACCATGCTCTaGGGGAGTGAGGAAACAGAG +
Preference number: 2 (lower is better)
Translates to: VRQRTGHNITGNETDRRTPWTML*GSEETE
Trigger: CTCTGTTTCCTCACTCCCTCAGAGCATGGTCCAGGG...TGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTGTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR TCA 90 bp CTCTGCAAAGCAATTCAACCAGGACACCAACAGAACCTCTCTCTTCCCACTGGGAGAGAAAGTAATTCATaGCGCCTTCTAGATGCCAGC +
Preference number: 2 (lower is better)
Translates to: LCKAIQPGHQQNLSLPTGRESNS*RLLDAS
Trigger: GCTGGCATCTAGAAGGCGTCATGAATTACTTTCTCT...CCCAGTGGGAAGAGAGAGGTTCTGTTGGTGTCCTGGTTGAATTGCTTTGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR TCA 90 bp CTGGCACGACCTCTAAGCACAAATGGTCACAAAACAGCTGGTTTGGAAAGCAGTATCCCAGAGGACAGTTaGTGGGCTATTGGCCACAAA +
Preference number: 2 (lower is better)
Translates to: LARPLSTNGHKTAGLESSIPEDS*WAIGHK
Trigger: TTTGTGGCCAATAGCCCATCAACTGTCCTCTGGGAT...ACTGCTTTCCAAACCAGCTGTTTTGTGACCATTTGTGCTTAGAGGTCGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CCA 90 bp GTAAGACAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACAAGCTCTAGAGCCCTGTaGTCAGTCCTGGCTGAACTG +
Preference number: 2 (lower is better)
Translates to: VRQRTGHNITGNETDRRTSSRAL*SVLAEL
Trigger: CAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGCT...TGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTGTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CCA 90 bp CATTATGCCTATGGGGAAACTGAGGCAGTGTCTACAGTGAGGCTTGTGTGTACAATTCCAGTGACTAGCTaGAGGGAAGCCCTTACTTCC +
Preference number: 2 (lower is better)
Translates to: HYAYGETEAVSTVRLVCTIPVTS*REALTS
Trigger: GGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAAT...TGTACACACAAGCCTCACTGTAGACACTGCCTCAGTTTCCCCATAGGCATAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CCA 90 bp CAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACAGATACACTCCTCTGTCACTCCTaGAATCTGCCAACCTCCCAC +
Preference number: 2 (lower is better)
Translates to: QRTGHNITGNETDRRTDTLLCHS*NLPTSH
Trigger: GTGGGAGGTTGGCAGATTCCAGGAGTGACAGAGGAG...TGTATCTGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR TCA 90 bp CATTATGCCTATGGGGAAACTGAGGCAGTGTCTACAGTGAGGCTTGTGTGTACATGGGTTTCCTGGCTATaGACAGGAACACACTTTTCC +
Preference number: 2 (lower is better)
Translates to: HYAYGETEAVSTVRLVCTWVSWL*TGTHFS
Trigger: GGAAAAGTGTGTTCCTGTTCATAGCCAGGAAACCCA...TGTACACACAAGCCTCACTGTAGACACTGCCTCAGTTTCCCCATAGGCATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR TCA 90 bp TGGATTCCAAGGCCTAGTGACAGTCACTTGTACCCAGGAACTGACAAAAAGCTTCTTCCCATGGTCTACTaGGTCTCATCTCTGCTGCTT +
Preference number: 2 (lower is better)
Translates to: WIPRPSDSHLYPGTDKKLLPMVY*VSSLLL
Trigger: AAGCAGCAGAGATGAGACTCAGTAGACCATGGGAAG...AAGCTTTTTGTCAGTTCCTGGGTACAAGTGACTGTCACTAGGCCTTGGAATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR TCA 90 bp GTAAGACAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACAGTGTTAACAAACATCTaGGGGAAGCTCGGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: VRQRTGHNITGNETDRRTVLTNI*GKLGCS
Trigger: GGAGCAGCCGAGCTTCCCTCAGATGTTTGTTAACAC...TGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTGTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR GCA 90 bp TTTGGAGTGTTCAGTGGTGAGCCACCAAGAGTTGGGGAGCATGACCAAGAATCTTGCTGGCCATTCTACTaGCTTCCCAGATTAACTACT +
Preference number: 2 (lower is better)
Translates to: FGVFSGEPPRVGEHDQESCWPFY*LPRLTT
Trigger: AGTAGTTAATCTGGGAAGGCAGTAGAATGGCCAGCA...AGATTCTTGGTCATGCTCCCCAACTCTTGGTGGCTCACCACTGAACACTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR GCA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCACTTACAGGCAGGAATaGTGGCCATTCTACTGCCTT +
Preference number: 2 (lower is better)
Translates to: HFSIPVTSWREALTSIIGTYRQE*WPFYCL
Trigger: AAGGCAGTAGAATGGCCAGCATTCCTGCCTGTAAGT...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR-3UTR GCA 90 bp TGGATTCCAAGGCCTAGTGACAGTCACTTGTACCCAGGAACTGACAAAAAGCTTTTCCACCTCCCAGATTaGAGCAATCCTCCCAACTCA +
Preference number: 2 (lower is better)
Translates to: WIPRPSDSHLYPGTDKKLFHLPD*SNPPNS
Trigger: TGAGTTGGGAGGATTGCTGCAATCTGGGAGGTGGAA...AAGCTTTTTGTCAGTTCCTGGGTACAAGTGACTGTCACTAGGCCTTGGAATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CCA 90 bp CAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACAGATACAACAGTGTCTTTGCCATaGGCTGGCACGACCTCTAAG +
Preference number: 2 (lower is better)
Translates to: QRTGHNITGNETDRRTDTTVSLP*AGTTSK
Trigger: CTTAGAGGTCGTGCCAGCCCATGGCAAAGACACTGT...TGTATCTGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR TCA 90 bp TTTGCTGAGCTGGGTTTCCTGGCTATGAACAGGAACACACTTTTCCATTCCAGTAAGCCTACAGAAGCCTaGGCCTATGTGCTGCTATAT +
Preference number: 2 (lower is better)
Translates to: FAELGFLAMNRNTLFHSSKPTEA*AYVLLY
Trigger: ATATAGCAGCACATAGGCTCAGGCTTCTGTAGGCTT...ACTGGAATGGAAAAGTGTGTTCCTGTTCATAGCCAGGAAACCCAGCTCAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR-3UTR CCA 90 bp TCCACTAACAGAATAAATAAATACAGTACACAGTGTCTTTGCCATGGGCTGGCAGTGTGGTCTTTAGCCTaGATTCCAGGCCCCTTAGCC +
Preference number: 2 (lower is better)
Translates to: STNRINKYSTQCLCHGLAVWSLA*IPGPLA
Trigger: GGCTAAGGGGCCTGGAATCCAGGCTAAAGACCACAC...TGCCAGCCCATGGCAAAGACACTGTGTACTGTATTTATTTATTCTGTTAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CCA 90 bp CTGGCACGACCTCTAAGCACAAATGGTCACAAAACAGCTGGTTTGGAAAGCAGTAGAGACCTGAGGATTTaGAAACCCTCAAATGCCTGT +
Preference number: 2 (lower is better)
Translates to: LARPLSTNGHKTAGLESSRDLRI*KPSNAC
Trigger: ACAGGCATTTGAGGGTTTCCAAATCCTCAGGTCTCT...ACTGCTTTCCAAACCAGCTGTTTTGTGACCATTTGTGCTTAGAGGTCGTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR TCA 90 bp TCCACTAACAGAATAAATAAATACAGTACACAGTGTCTTTGCCATGGGCTGGCAGAGGTGCTATTGAGATaGGGATCTAGCCAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: STNRINKYSTQCLCHGLAEVLLR*GSSQGE
Trigger: CTCTCCCTGGCTAGATCCTCATCTCAATAGCACCTC...TGCCAGCCCATGGCAAAGACACTGTGTACTGTATTTATTTATTCTGTTAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CCA 90 bp TCCACTAACAGAATAAATAAATACAGTACACAGTGTCTTTGCCATGGGCTGGCAGCTTACCAGTGTGCTTaGAGGAGACACAGGTGTCCT +
Preference number: 2 (lower is better)
Translates to: STNRINKYSTQCLCHGLAAYQCA*RRHRCP
Trigger: AGGACACCTGTGTCTCCTCCAAGCACACTGGTAAGC...TGCCAGCCCATGGCAAAGACACTGTGTACTGTATTTATTTATTCTGTTAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR GCA 90 bp TGGATTCCAAGGCCTAGTGACAGTCACTTGTACCCAGGAACTGACAAAAAGCTTTCCCAGATTAACTACTaGCTCCTCAATCTTGGGAAT +
Preference number: 2 (lower is better)
Translates to: WIPRPSDSHLYPGTDKKLSQINY*LLNLGN
Trigger: ATTCCCAAGATTGAGGAGGCAGTAGTTAATCTGGGA...AAGCTTTTTGTCAGTTCCTGGGTACAAGTGACTGTCACTAGGCCTTGGAATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CCA 72 bp CAGCAGGCCTGGGAGGGGCTCCAGCATCAGGTGTGGTaGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGC +
Preference number: 3 (lower is better)
Translates to: QQAWEGLQHQVW*ACTLCPQEGKR
Trigger: GCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTGATGCTGGAGCCCCTCCCAGGCCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CCA 72 bp GCCCAGCAGGCCTGGGAGGGGCTCCAGCATCAGGTGTaGTGGGCCTGTACCCTCTGCCCACAAGAAGGGAAG +
Preference number: 3 (lower is better)
Translates to: AQQAWEGLQHQV*WACTLCPQEGK
Trigger: CTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTGATGCTGGAGCCCCTCCCAGGCCTGCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 72 bp TCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATaGAGAGGGTGTGTAGGTGTGGGCTTCACCTCGGGC +
Preference number: 3 (lower is better)
Translates to: SLFGLHGVQAGP*RGCVGVGFTSG
Trigger: GCCCGAGGTGAAGCCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR CCA 72 bp AGCCAGGGAGAGCCTCTCACTTCTCCGAGGGAAGCTTaGGGCACCCCAGCCTCTCACCTCCTCCCTATTCGG +
Preference number: 3 (lower is better)
Translates to: SQGEPLTSPREA*GTPASHLLPIR
Trigger: CCGAATAGGGAGGAGGTGAGAGGCTGGGGTGCCCCAAGCTTCCCTCGGAGAAGTGAGAGGCTCTCCCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR GCA 72 bp GGGCTCCAGCATCAGGTGTGGTGGGCCTGTACCCTCTaGCCACAAGAAGGGAAGCGCGGTGCTGCTTACAAG +
Preference number: 3 (lower is better)
Translates to: GLQHQVWWACTL*PQEGKRGAAYK
Trigger: CTTGTAAGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTGATGCTGGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 72 bp CTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCTaGTTACAAGCGTGCTCAGAGGAGATGCACGGTGCC +
Preference number: 3 (lower is better)
Translates to: LYPLPTRREARC*LQACSEEMHGA
Trigger: GGCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 72 bp GGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTaGTGCTTACAAGCGTGCTCAGAGGAGATGCACGGT +
Preference number: 3 (lower is better)
Translates to: GLYPLPTRREAR*CLQACSEEMHG
Trigger: ACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR TCA 72 bp CTGGTCAGCCGTACCCCTGCCTTGGACAGTATCTGCTaGACGTGGAGGCTCAGCTTGTGGGAGAAGAGCACC +
Preference number: 3 (lower is better)
Translates to: LVSRTPALDSIC*TWRLSLWEKST
Trigger: GGTGCTCTTCTCCCACAAGCTGAGCCTCCACGTTCAGCAGATACTGTCCAAGGCAGGGGTACGGCTGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR GCA 72 bp AAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATaGACGGTGCCGCTTACCAGTGTGCTTGGAGGAGAC +
Preference number: 3 (lower is better)
Translates to: KRGAAYKRAQRR*TVPLTSVLGGD
Trigger: GTCTCCTCCAAGCACACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 72 bp CCCACAAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTaGTCAGAGGAGATGCACGGTGCCGCTTACCAGTGT +
Preference number: 3 (lower is better)
Translates to: PTRREARCCLQA*SEEMHGAAYQC
Trigger: ACACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CCA 72 bp TCCTCTTGCTCTCCAGCTGCTTTCAGTACCCAAGGCTaGTGCCCTAAACTTGAGAGCCCTCCGAGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: SSCSPAAFSTQG*CPKLESPPRAG
Trigger: CCCTGCCCTCGGAGGGCTCTCAAGTTTAGGGCACCAGCCTTGGGTACTGAAAGCAGCTGGAGAGCAAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CAA 90 bp CACAAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGAGAGAGGCTACAGGCTaGCCCAAGGTCACACAGCTT +
Preference number: 3 (lower is better)
Translates to: HKKGSAVLLTSVLRGDARREATG*PKVTQL
Trigger: AAGCTGTGTGACCTTGGGCAAGCCTGTAGCCTCTCT...CCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CAA 90 bp CAGGTGTGGTGGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCTGCTCCTAGTGACAGTCACTaGTACCCAGGAACTGACAAA +
Preference number: 3 (lower is better)
Translates to: QVWWACTLCPQEGKRGAAPSDSH*YPGTDK
Trigger: TTTGTCAGTTCCTGGGTACAAGTGACTGTCACTAGG...AGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR TCA 72 bp TGCCAACCTCCCACAGCGCTGCCTAAGTCTCTCCTCTaGTGCCCCCATGGCTGGTGGATTCCCCTTCCAAAT +
Preference number: 3 (lower is better)
Translates to: CQPPTALPKSLL*CPHGWWIPLPN
Trigger: ATTTGGAAGGGGAATCCACCAGCCATGGGGGCATCAGAGGAGAGACTTAGGCAGCGCTGTGGGAGGTTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 72 bp GTGCTCAGAGGAGATGCACGGTGCCGCTTACCAGTGTaGTTGGAGGAGACACAGGTGTCCTCTCCTCTTGCT +
Preference number: 3 (lower is better)
Translates to: VLRGDARCRLPV*LEETQVSSPLA
Trigger: AGCAAGAGGAGAGGACACCTGTGTCTCCTCCAAGCACACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 72 bp GTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGTaGCGCTTACCAGTGTGCTTGGAGGAGACACAGGTG +
Preference number: 3 (lower is better)
Translates to: VLLTSVLRGDAR*RLPVCLEETQV
Trigger: CACCTGTGTCTCCTCCAAGCACACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CCA 72 bp CAGGGAAGTCTCACCAAAGAGAGCTCTAGAGCCCTGTaGTCAGTCCTGGCTGAACTGTGTCACCGGGCCTCT +
Preference number: 3 (lower is better)
Translates to: QGSLTKESSRAL*SVLAELCHRAS
Trigger: AGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGCTCTCTTTGGTGAGACTTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR-3UTR CAA 90 bp CTGGCACGACCTCTAAGCACAAATGGTCACAAAACAGCTGGTTTGGAAAGCAGTGCCTTGGAGTTGGGGTaGGGATCCGGGCCCCTGGAC +
Preference number: 3 (lower is better)
Translates to: LARPLSTNGHKTAGLESSALELG*GSGPLD
Trigger: GTCCAGGGGCCCGGATCCCAACCCCAACTCCAAGGC...ACTGCTTTCCAAACCAGCTGTTTTGTGACCATTTGTGCTTAGAGGTCGTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 72 bp GGGACAGGAAGCCTACAGAAGCCTGAGCCTATGTGCTaGTATATGCTTTGCACGCACCGTGCTCAGGAGCAG +
Preference number: 3 (lower is better)
Translates to: GTGSLQKPEPMC*YMLCTHRAQEQ
Trigger: CTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGCAGCACATAGGCTCAGGCTTCTGTAGGCTTCCTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR CCA 72 bp TCACCAAAGAGAGCTCTAGAGCCCTGTGGTCAGTCCTaGCTGAACTGTGTCACCGGGCCTCTGTCTTGGGAA +
Preference number: 3 (lower is better)
Translates to: SPKRALEPCGQS*LNCVTGPLSWE
Trigger: TTCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGCTCTCTTTGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR CCA 72 bp GCCCCACCTCTCGTGAAGCCAGCCACCCCCTTCCCATaGTCTACTGAGTCTCATCTCTGCTGCTTTGTTCAA +
Preference number: 3 (lower is better)
Translates to: APPLVKPATPFP*STESHLCCFVQ
Trigger: TTGAACAAAGCAGCAGAGATGAGACTCAGTAGACCATGGGAAGGGGGTGGCTGGCTTCACGAGAGGTGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CAA 90 bp CACAAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGAATCCCAGAGGACAGTaGATGGGCTATTGGCCACAA +
Preference number: 3 (lower is better)
Translates to: HKKGSAVLLTSVLRGDARNPRGQ*MGYWPQ
Trigger: TTGTGGCCAATAGCCCATCAACTGTCCTCTGGGATT...CCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 72 bp CAGAGTTCAACCTTCATTCCTGGTCAGCCGTACCCCTaGCTTGGACAGTATCTGCTGAACGTGGAGGCTCAG +
Preference number: 3 (lower is better)
Translates to: QSSTFIPGQPYP*LGQYLLNVEAQ
Trigger: CTGAGCCTCCACGTTCAGCAGATACTGTCCAAGGCAGGGGTACGGCTGACCAGGAATGAAGGTTGAACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR CCA 72 bp CAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTTaGGAAGACTTACAGGCAGGAATGCTGGCCATTCTA +
Preference number: 3 (lower is better)
Translates to: QSWLNCVTGPLS*EDLQAGMLAIL
Trigger: TAGAATGGCCAGCATTCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR-3UTR CAA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCACGTGGAGGCTCAGCTaGTGGGAGAAGAGCACCAGC +
Preference number: 3 (lower is better)
Translates to: HFSIPVTSWREALTSIIGTWRLS*WEKSTS
Trigger: GCTGGTGCTCTTCTCCCACAAGCTGAGCCTCCACGT...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR TCA 72 bp CAGCCTAGGCTGACCCCCATCAAGGGTGATGGGCATTaGCTTCTCTGCAAAGCAATTCAACCAGGACACCAA +
Preference number: 3 (lower is better)
Translates to: QPRLTPIKGDGH*LLCKAIQPGHQ
Trigger: TTGGTGTCCTGGTTGAATTGCTTTGCAGAGAAGTCAATGCCCATCACCCTTGATGGGGGTCAGCCTAGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 72 bp CTACAGAAGCCTGAGCCTATGTGCTGCTATATGCTTTaGACGCACCGTGCTCAGGAGCAGAGTTCAACCTTC +
Preference number: 3 (lower is better)
Translates to: LQKPEPMCCYML*THRAQEQSSTF
Trigger: GAAGGTTGAACTCTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGCAGCACATAGGCTCAGGCTTCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR GCA 72 bp GAAGCCTACAGAAGCCTGAGCCTATGTGCTGCTATATaGTTTGCACGCACCGTGCTCAGGAGCAGAGTTCAA +
Preference number: 3 (lower is better)
Translates to: EAYRSLSLCAAI*FARTVLRSRVQ
Trigger: TTGAACTCTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGCAGCACATAGGCTCAGGCTTCTGTAGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR GCA 72 bp CCCAGCAAGAGACCTGAGGATTTGGAAACCCTCAAATaGCTGTCTTGGTGCTTGCCACATGTAGGTGTGGTC +
Preference number: 3 (lower is better)
Translates to: PSKRPEDLETLK*LSWCLPHVGVV
Trigger: GACCACACCTACATGTGGCAAGCACCAAGACAGGCATTTGAGGGTTTCCAAATCCTCAGGTCTCTTGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CAA 90 bp TTTGGAGTGTTCAGTGGTGAGCCACCAAGAGTTGGGGAGCATGACCAAGAATCTCTTCCACCTCCCAGATaGCAGCAATCCTCCCAACTC +
Preference number: 3 (lower is better)
Translates to: FGVFSGEPPRVGEHDQESLPPPR*QQSSQL
Trigger: GAGTTGGGAGGATTGCTGCAATCTGGGAGGTGGAAG...AGATTCTTGGTCATGCTCCCCAACTCTTGGTGGCTCACCACTGAACACTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CAA 90 bp TGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCCGCTTACCAGTGTGCTTGGAAGATCAAATCCAGATaGCCTGAACTAGAAGGGACC +
Preference number: 3 (lower is better)
Translates to: CLQACSEEMHGAAYQCAWKIKSR*PELEGT
Trigger: GGTCCCTTCTAGTTCAGGCAATCTGGATTTGATCTT...CCAAGCACACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CAA 90 bp TCCACTAACAGAATAAATAAATACAGTACACAGTGTCTTTGCCATGGGCTGGCACCACCAGCCTTGGAGTaGGGGTTGGGATCCGGGCCC +
Preference number: 3 (lower is better)
Translates to: STNRINKYSTQCLCHGLAPPALE*GLGSGP
Trigger: GGGCCCGGATCCCAACCCCAACTCCAAGGCTGGTGG...TGCCAGCCCATGGCAAAGACACTGTGTACTGTATTTATTTATTCTGTTAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CAA 90 bp CTCTGCAAAGCAATTCAACCAGGACACCAACAGAACCTCTCTCTTCCCACTGGGTCTCCAGCTAGGGCCTaGTTGCTTCTATTGGGCATA +
Preference number: 3 (lower is better)
Translates to: LCKAIQPGHQQNLSLPTGSPARA*LLLLGI
Trigger: TATGCCCAATAGAAGCAACAAGGCCCTAGCTGGAGA...CCCAGTGGGAAGAGAGAGGTTCTGTTGGTGTCCTGGTTGAATTGCTTTGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CAA 90 bp CATTATGCCTATGGGGAAACTGAGGCAGTGTCTACAGTGAGGCTTGTGTGTACAGTGCTGCTATATGCTTaGCACGCACCGTGCTCAGGA +
Preference number: 3 (lower is better)
Translates to: HYAYGETEAVSTVRLVCTVLLYA*HAPCSG
Trigger: TCCTGAGCACGGTGCGTGCAAAGCATATAGCAGCAC...TGTACACACAAGCCTCACTGTAGACACTGCCTCAGTTTCCCCATAGGCATAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CCA 72 bp GGCACGACCTCTAAGCACAAATGGTCACAAAACAGCTaGTTTGGAAAGCAGTCTGTAGAGCCCACCAGCCTT +
Preference number: 3 (lower is better)
Translates to: GTTSKHKWSQNS*FGKQSVEPTSL
Trigger: AAGGCTGGTGGGCTCTACAGACTGCTTTCCAAACCAGCTGTTTTGTGACCATTTGTGCTTAGAGGTCGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CAA 90 bp CTCTGCAAAGCAATTCAACCAGGACACCAACAGAACCTCTCTCTTCCCACTGGGTTCTTTAAGCAGGGTTaGGAGTGTTCAGTGGTGAGC +
Preference number: 3 (lower is better)
Translates to: LCKAIQPGHQQNLSLPTGFFKQG*ECSVVS
Trigger: GCTCACCACTGAACACTCCAAACCCTGCTTAAAGAA...CCCAGTGGGAAGAGAGAGGTTCTGTTGGTGTCCTGGTTGAATTGCTTTGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR TCA 72 bp ATTATGCCTATGGGGAAACTGAGGCAGTGTCTACAGTaGGGCTTGTGTGTACAACACCCCTTGCTCCACAGA +
Preference number: 3 (lower is better)
Translates to: IMPMGKLRQCLQ*GLCVQHPLLHR
Trigger: TCTGTGGAGCAAGGGGTGTTGTACACACAAGCCTCACTGTAGACACTGCCTCAGTTTCCCCATAGGCATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR TCA 72 bp AAACAGAACTTCCTGGGGCTAATCCCAGAGGACAGTTaGTGGGCTATTGGCCACAAAATCCCTCCCAAACCA +
Preference number: 3 (lower is better)
Translates to: KQNFLGLIPEDS*WAIGHKIPPKP
Trigger: TGGTTTGGGAGGGATTTTGTGGCCAATAGCCCATCAACTGTCCTCTGGGATTAGCCCCAGGAAGTTCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CAA 90 bp TCCACTAACAGAATAAATAAATACAGTACACAGTGTCTTTGCCATGGGCTGGCACACCGGGCCTCTGTCTaGGGAAGACTTACAGGCAGG +
Preference number: 3 (lower is better)
Translates to: STNRINKYSTQCLCHGLAHRASV*GRLTGR
Trigger: CCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTG...TGCCAGCCCATGGCAAAGACACTGTGTACTGTATTTATTTATTCTGTTAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CAA 90 bp GTAAGACAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACATGCCTGTCTTGGTGCTaGCCACATGTAGGTGTGGTC +
Preference number: 3 (lower is better)
Translates to: VRQRTGHNITGNETDRRTCLSWC*PHVGVV
Trigger: GACCACACCTACATGTGGCAAGCACCAAGACAGGCA...TGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTGTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR TCA 72 bp GCTGGCACTGGAACTCAAGATCAAATCCAGATTGCCTaGACTAGAAGGGACCCATTATGCCTATGGGGAAAC +
Preference number: 3 (lower is better)
Translates to: AGTGTQDQIQIA*TRRDPLCLWGN
Trigger: GTTTCCCCATAGGCATAATGGGTCCCTTCTAGTTCAGGCAATCTGGATTTGATCTTGAGTTCCAGTGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CCA 72 bp TCTTTGCCATGGGCTGGCACGACCTCTAAGCACAAATaGTCACAAAACAGCTGGTTTGGAAAGCAGTCTGTA +
Preference number: 3 (lower is better)
Translates to: SLPWAGTTSKHK*SQNSWFGKQSV
Trigger: TACAGACTGCTTTCCAAACCAGCTGTTTTGTGACCATTTGTGCTTAGAGGTCGTGCCAGCCCATGGCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CAA 90 bp CTGGCACGACCTCTAAGCACAAATGGTCACAAAACAGCTGGTTTGGAAAGCAGTAAGAGACCTGAGGATTaGGAAACCCTCAAATGCCTG +
Preference number: 3 (lower is better)
Translates to: LARPLSTNGHKTAGLESSKRPED*ETLKCL
Trigger: CAGGCATTTGAGGGTTTCCAAATCCTCAGGTCTCTT...ACTGCTTTCCAAACCAGCTGTTTTGTGACCATTTGTGCTTAGAGGTCGTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR-3UTR CAA 90 bp CAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACAGATACATGTGTACAACACCCCTaGCTCCACAGAAAGGCAATA +
Preference number: 3 (lower is better)
Translates to: QRTGHNITGNETDRRTDTCVQHP*LHRKAI
Trigger: TATTGCCTTTCTGTGGAGCAAGGGGTGTTGTACACA...TGTATCTGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR GCA 72 bp ATGCTGGCCATTCTACTGCCTTCCCAGATTAACTACTaGCTCCTCAATCTTGGGAATGAGGACCTCAAAATT +
Preference number: 3 (lower is better)
Translates to: MLAILLPSQINY*LLNLGNEDLKI
Trigger: AATTTTGAGGTCCTCATTCCCAAGATTGAGGAGGCAGTAGTTAATCTGGGAAGGCAGTAGAATGGCCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR-3UTR CAA 90 bp GTAAGACAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACAGCAGATTTGGGTCAATaGAATGGGACAAGTGTTAAC +
Preference number: 3 (lower is better)
Translates to: VRQRTGHNITGNETDRRTADLGQ*NGTSVN
Trigger: GTTAACACTTGTCCCATTCAATTGACCCAAATCTGC...TGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTGTCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp CAGGTGTGGTGGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCTGCTCGAGCTGCTGAGCCGTaGACGCTGTGCGGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: QVWWACTLCPQEGKRGAARAAEP*TLCGCD
Trigger: GTCGCAGCCGCACAGCGTTCACGGCTCAGCAGCTCG...AGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CAGGTGTGGTGGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCTGCTCCCCACACACCCTGGTaGGCAGCAGCGGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: QVWWACTLCPQEGKRGAAPHTPW*AAAAAD
Trigger: GTCAGCAGCCGCTGCTGCCCACCAGGGTGTGTGGGG...AGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp TCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTAGGGCCTCGAGCTGCTaGGCCGTGAACGCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: SLFGLHGVQAGPCRGCVGRASSC*AVNAVR
Trigger: CCGCACAGCGTTCACGGCTCAGCAGCTCGAGGCCCT...ACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp TCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTCCAGCGGGGCCATGTTaGCGCCCAGGTAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: SLFGLHGVQAGPCRGCVGPAGPC*RPGRAQ
Trigger: CTGTGCCCTACCTGGGCGTCAACATGGCCCCGCTGG...ACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGGCCAGTGCCACCTCCTaGCTGCAGCTCCAGATCCCC +
Preference number: 4 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGASATS*LQLQIP
Trigger: GGGGATCTGGAGCTGCAGGCAGGAGGTGGCACTGGC...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGAATCTGCCTTGGGGCTaGCCCTCTTGCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGNLPWG*PSCSPA
Trigger: GGCTGGGCTGCAAGAGGGGCAGCCCCAAGGCAGATT...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGGGGCCTCAGGCAGGTTaGTGCACATGGCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGGPQAG*CTWPAS
Trigger: AGAGGCTGGCCATGTGCACCAACCTGCCTGAGGCCC...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp CAGGTGTGGTGGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCTGCTGCTGGGTATCTGGAGTaGGGGCCTCGGCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: QVWWACTLCPQEGKRGAAAGYLE*GPRPCL
Trigger: AAGGCAAGGCCGAGGCCCCCACTCCAGATACCCAGC...AGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGGTCCAGCTGGGTATCTaGAGTGGGGGCCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGVQLGI*SGGLGL
Trigger: AAGGCCGAGGCCCCCACTCCAGATACCCAGCTGGAC...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGGGCTCTTCTCAGCTTTaGGGTCCTCAGCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGGSSQL*GPQPLP
Trigger: GGGCAGGGGCTGAGGACCCCAAAGCTGAGAAGAGCC...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGTCTCCGAGGGAAGCTTaGGGCACCCCAGCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGSPREA*GTPASH
Trigger: GTGAGAGGCTGGGGTGCCCCAAGCTTCCCTCGGAGA...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp AAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCCTGGGGCCACAGGAGTaGTGGTCAGGCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KKGSAVLLTSVLRGDARCLGPQE*WSGCLG
Trigger: CCCCAGGCAGCCTGACCATCACTCCTGTGGCCCCAG...GCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGGCCTGCTGGGCTGCCTaGTGGTGCAGGTTGTACATG +
Preference number: 4 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGACWAA*WCRLYM
Trigger: CATGTACAACCTGCACCAGCAGGCAGCCCAGCAGGC...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGCCTCAGGCAGGTTGGTaGACATGGCCAGCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGPQAGW*TWPASH
Trigger: GTGAGAGGCTGGCCATGTGCACCAACCTGCCTGAGG...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp TCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGGCAGACGTGGGGGCTaGTCAGTGTCCAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: SLFGLHGVQAGPCRGCVGGRRGG*SVSSWV
Trigger: TACCCAGCTGGACACTGAGCAGCCCCCACGTCTGCC...ACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGTTGGTGGCCGCCATGTaGTGGCGGAATTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGLVAAM*WRNCSC
Trigger: GCAGGAGCAATTCCGCCAGCACATGGCGGCCACCAA...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp GCTCTAGAGCCCTGTGGTCAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTGCCAGTGCCACCTCCTaGCTGCAGCTCCAGATCCCC +
Preference number: 4 (lower is better)
Translates to: ALEPCGQSWLNCVTGPLSASATS*LQLQIP
Trigger: GGGGATCTGGAGCTGCAGGCAGGAGGTGGCACTGGC...AGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGAGGTGTGAGCCACCATaGCCAGCCGGTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGRCEPP*PAGHTA
Trigger: AGCTGTGTGACCGGCTGGGCATGGTGGCTCACACCT...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp TCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGGCTCTTCTCAGCTTTaGGGTCCTCAGCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SLFGLHGVQAGPCRGCVGGSSQL*GPQPLP
Trigger: GGGCAGGGGCTGAGGACCCCAAAGCTGAGAAGAGCC...ACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp GCTCTAGAGCCCTGTGGTCAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTTGTAAGCGCATGCACTaGAGGCCGGTAGTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: ALEPCGQSWLNCVTGPLSCKRMH*RPVVGG
Trigger: GCCCCCGACTACCGGCCTTCAGTGCATGCGCTTACA...AGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp AAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCGGACTGGCAGTGCAGTaGGCCCAGCGGGGCCATGTT +
Preference number: 4 (lower is better)
Translates to: KKGSAVLLTSVLRGDARCGLAVQ*AQRGHV
Trigger: AACATGGCCCCGCTGGGCTCACTGCACTGCCAGTCC...GCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp TCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGCCTGCTGGGCTGCCTaGTGGTGCAGGTTGTACATG +
Preference number: 4 (lower is better)
Translates to: SLFGLHGVQAGPCRGCVGACWAA*WCRLYM
Trigger: CATGTACAACCTGCACCAGCAGGCAGCCCAGCAGGC...ACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp TCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTTGCTGGGCTGCCTGCTaGTGCAGGTTGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: SLFGLHGVQAGPCRGCVGCWAAC*CRLYMA
Trigger: CGCCATGTACAACCTGCACCAGCAGGCAGCCCAGCA...ACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGGCAGGTTGGTGCACATaGCCAGCCTCTCACGCATCA +
Preference number: 4 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGAGWCT*PASHAS
Trigger: TGATGCGTGAGAGGCTGGCCATGTGCACCAACCTGC...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp GCTCTAGAGCCCTGTGGTCAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTCTGGGGAATCTGCCTTaGGGCTGCCCCTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: ALEPCGQSWLNCVTGPLSLGNLP*GCPSCS
Trigger: GCTGCAAGAGGGGCAGCCCCAAGGCAGATTCCCCAG...AGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp CAGGTGTGGTGGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCTGCTCCTAAGACCCCTGGCTaGGTTGGAAGCCAGACAGTC +
Preference number: 4 (lower is better)
Translates to: QVWWACTLCPQEGKRGAAPKTPG*VGSQTV
Trigger: GACTGTCTGGCTTCCAACCCAGCCAGGGGTCTTAGG...AGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp TCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTCCTCTGATGCCCCCATaGCTGGTGGATTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SLFGLHGVQAGPCRGCVGPLMPP*LVDSPS
Trigger: GGAAGGGGAATCCACCAGCCATGGGGGCATCAGAGG...ACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp TCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTTGGCGGAATTGCTCCTaGAGACGGAAGAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SLFGLHGVQAGPCRGCVGWRNCS*RRKRLS
Trigger: GCTGAGCCTCTTCCGTCTGCAGGAGCAATTCCGCCA...ACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGATGTGCTGGCGGAATTaGTCCTGCAGACGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGMCWRN*SCRRKR
Trigger: CCTCTTCCGTCTGCAGGAGCAATTCCGCCAGCACAT...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp GCCTTGTTGCTTCTATTGGGCATAGAAAGGAACAGCTTCCTAGAGAGGCCGCAGAGGGAGGCCGCGTGCTaGTTGGCCCGGAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: ALLLLLGIERNSFLERPQREAAC*LARSRR
Trigger: CCTGCGGCTCCGGGCCAAGCAGCACGCGGCCTCCCT...CTGCGGCCTCTCTAGGAAGCTGTTCCTTTCTATGCCCAATAGAAGCAACAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp GCTATATGCTTTGCACGCACCGTGCTCAGGAGCAGAGTTCAACCTTCATTCCTGAGGGAGGCCGCGTGCTaGTTGGCCCGGAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: AICFARTVLRSRVQPSFLREAAC*LARSRR
Trigger: CCTGCGGCTCCGGGCCAAGCAGCACGCGGCCTCCCT...CAGGAATGAAGGTTGAACTCTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp TCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGGTCAGCCGTACCCCTaGCTTGGACAGTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLFGLHGVQAGPCRGCVGGQPYP*LGQYLL
Trigger: CAGCAGATACTGTCCAAGGCAGGGGTACGGCTGACC...ACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp GCTCTAGAGCCCTGTGGTCAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTTGGGCCTGTACCCTCTaGCCACAAGAAGGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: ALEPCGQSWLNCVTGPLSWACTL*PQEGKR
Trigger: GCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCA...AGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp TCTGCCAACCTCCCACAGCGCTGCCTAAGTCTCTCCTCTGATGCCCCCATGGCTCGGGCCCCTGGACCATaGTCTGAGGGAGTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SANLPQRCLSLSSDAPMARAPGP*SEGVRK
Trigger: TTTCCTCACTCCCTCAGAGCATGGTCCAGGGGCCCG...AGCCATGGGGGCATCAGAGGAGAGACTTAGGCAGCGCTGTGGGAGGTTGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp TCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGCAGGTTGGTGCACATaGCCAGCCTCTCACGCATCA +
Preference number: 4 (lower is better)
Translates to: SLFGLHGVQAGPCRGCVGAGWCT*PASHAS
Trigger: TGATGCGTGAGAGGCTGGCCATGTGCACCAACCTGC...ACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGGCCACCCCCTTCCCATaGTCTACTGAGTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGATPFP*STESHL
Trigger: GAGATGAGACTCAGTAGACCATGGGAAGGGGGTGGC...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CAGGTGTGGTGGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCTGCTGTGTGGTCTTTAGCCTaGATTCCAGGCCCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: QVWWACTLCPQEGKRGAAVWSLA*IPGPLA
Trigger: GGCTAAGGGGCCTGGAATCCAGGCTAAAGACCACAC...AGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGTGCCCCCATGGCTGGTaGATTCCCCTTCCAAATTCC +
Preference number: 4 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGCPHGW*IPLPNS
Trigger: GGAATTTGGAAGGGGAATCCACCAGCCATGGGGGCA...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp TGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCCGCTTACCAGTGTGCTTGGTGTAAGCGCATGCACTaGAGGCCGGTAGTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: CLQACSEEMHGAAYQCAWCKRMH*RPVVGG
Trigger: GCCCCCGACTACCGGCCTTCAGTGCATGCGCTTACA...CCAAGCACACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp CAGGTGTGGTGGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCTGCTTTGGACAGTATCTGCTaGACGTGGAGGCTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QVWWACTLCPQEGKRGAALDSIC*TWRLSL
Trigger: CAAGCTGAGCCTCCACGTTCAGCAGATACTGTCCAA...AGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp AAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCGAGCACCTCTTCCCCTaGTGCTGCTCTCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: KKGSAVLLTSVLRGDARCEHLFP*CCSPSR
Trigger: CCTGGATGGAGAGCAGCAGCAGGGGAAGAGGTGCTC...GCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp GCTCTAGAGCCCTGTGGTCAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTGGTCAGCCGTACCCCTaGCTTGGACAGTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: ALEPCGQSWLNCVTGPLSGQPYP*LGQYLL
Trigger: CAGCAGATACTGTCCAAGGCAGGGGTACGGCTGACC...AGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGGGCATGAGGCATTCCTaGAAGGGACAGTCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGGMRHS*KGQSEL
Trigger: AAGCTCTGACTGTCCCTTCCAGGAATGCCTCATGCC...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp GCTATATGCTTTGCACGCACCGTGCTCAGGAGCAGAGTTCAACCTTCATTCCTGCGAGCTGCTGAGCCGTaGACGCTGTGCGGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: AICFARTVLRSRVQPSFLRAAEP*TLCGCD
Trigger: GTCGCAGCCGCACAGCGTTCACGGCTCAGCAGCTCG...CAGGAATGAAGGTTGAACTCTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp GCTATATGCTTTGCACGCACCGTGCTCAGGAGCAGAGTTCAACCTTCATTCCTGCCAGCGGGGCCATGTTaGCGCCCAGGTAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: AICFARTVLRSRVQPSFLPAGPC*RPGRAQ
Trigger: CTGTGCCCTACCTGGGCGTCAACATGGCCCCGCTGG...CAGGAATGAAGGTTGAACTCTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp CACAAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGCCCTGGACCATGCTCTaGGGGAGTGAGGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: HKKGSAVLLTSVLRGDARPWTML*GSEETE
Trigger: CTCTGTTTCCTCACTCCCTCAGAGCATGGTCCAGGG...CCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp CCAACACAGCCAACACCAAAGGAAGAAACCAGGGGCAGCGGGAGAGACAAGGAGTTCTTGAACCACACCTaGACCCGGGCCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PTQPTPKEETRGSGRDKEFLNHT*TRASGR
Trigger: CCTGCCTGAGGCCCGGGTGCAGGTGTGGTTCAAGAA...CTCCTTGTCTCTCCCGCTGCCCCTGGTTTCTTCCTTTGGTGTTGGCTGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp GCTCTAGAGCCCTGTGGTCAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTTTCTGCAGGCTACGCTaGTTCTTCCGGAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: ALEPCGQSWLNCVTGPLSFCRLR*FFRNLA
Trigger: GGCCAAGTTCCGGAAGAAGCAGCGTAGCCTGCAGAA...AGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp TCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTTGGAGCTGTTCCTTCTaGAGGCTACGCTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLFGLHGVQAGPCRGCVGWSCSF*RLRCFF
Trigger: GAAGAAGCAGCGTAGCCTGCAGAAGGAACAGCTCCA...ACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp GCTATATGCTTTGCACGCACCGTGCTCAGGAGCAGAGTTCAACCTTCATTCCTGTGGGGGCCTCGGCCTTaGCTTCCCCATGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: AICFARTVLRSRVQPSFLWGPRP*LPHGSP
Trigger: AGGGCTCCCATGGGGAAGGCAAGGCCGAGGCCCCCA...CAGGAATGAAGGTTGAACTCTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp CCAACACAGCCAACACCAAAGGAAGAAACCAGGGGCAGCGGGAGAGACAAGGAGGAGCACCTCTTCCCCTaGTGCTGCTCTCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: PTQPTPKEETRGSGRDKEEHLFP*CCSPSR
Trigger: CCTGGATGGAGAGCAGCAGCAGGGGAAGAGGTGCTC...CTCCTTGTCTCTCCCGCTGCCCCTGGTTTCTTCCTTTGGTGTTGGCTGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp TGCTCTCCAGCTGCTTTCAGTACCCAAGGCTGGTGCCCTAAACTTGAGAGCCCTCTGGGGAATCTGCCTTaGGGCTGCCCCTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: CSPAAFSTQGWCPKLESPLGNLP*GCPSCS
Trigger: GCTGCAAGAGGGGCAGCCCCAAGGCAGATTCCCCAG...AGGGCTCTCAAGTTTAGGGCACCAGCCTTGGGTACTGAAAGCAGCTGGAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp GCCTTGTTGCTTCTATTGGGCATAGAAAGGAACAGCTTCCTAGAGAGGCCGCAGAGGCCGCGTGCTGCTTaGCCCGGAGCCGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: ALLLLLGIERNSFLERPQRPRAA*PGAAGS
Trigger: AGAACCTGCGGCTCCGGGCCAAGCAGCACGCGGCCT...CTGCGGCCTCTCTAGGAAGCTGTTCCTTTCTATGCCCAATAGAAGCAACAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp GCTCTAGAGCCCTGTGGTCAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTAGCTCTAGAGCCCTGTaGTCAGTCCTGGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: ALEPCGQSWLNCVTGPLSSSRAL*SVLAEL
Trigger: CAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGCT...AGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp CACAGGTGTCCTCTCCTCTTGCTCTCCAGCTGCTTTCAGTACCCAAGGCTGGTGCTCCAGCATCAGGTGTaGTGGGCCTGTACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: HRCPLLLLSSCFQYPRLVLQHQV*WACTLC
Trigger: GCAGAGGGTACAGGCCCACCACACCTGATGCTGGAG...CACCAGCCTTGGGTACTGAAAGCAGCTGGAGAGCAAGAGGAGAGGACACCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGAAGCCTACAGAAGCCTaGGCCTATGTGCTGCTATAT +
Preference number: 4 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGKPTEA*AYVLLY
Trigger: ATATAGCAGCACATAGGCTCAGGCTTCTGTAGGCTT...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp TCTGCCAACCTCCCACAGCGCTGCCTAAGTCTCTCCTCTGATGCCCCCATGGCTACTTTTCCATTCCAGTaGCTAGCTGGAGGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SANLPQRCLSLSSDAPMATFPFQ*LAGGKP
Trigger: GGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGT...AGCCATGGGGGCATCAGAGGAGAGACTTAGGCAGCGCTGTGGGAGGTTGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp CTGGCTGAACTGTGTCACCGGGCCTCTGTCTTGGGAAGACTTACAGGCAGGAATCCTCAGGCAGGTTGGTaGACATGGCCAGCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LAELCHRASVLGRLTGRNPQAGW*TWPASH
Trigger: GTGAGAGGCTGGCCATGTGCACCAACCTGCCTGAGG...ATTCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp CTGGCTGAACTGTGTCACCGGGCCTCTGTCTTGGGAAGACTTACAGGCAGGAATTTCTTGAACCACACCTaGACCCGGGCCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LAELCHRASVLGRLTGRNFLNHT*TRASGR
Trigger: CCTGCCTGAGGCCCGGGTGCAGGTGTGGTTCAAGAA...ATTCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp AAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCCCCTCAGCCTCCTTCTaGTTCTGGAGCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: KKGSAVLLTSVLRGDARCPSASF*FWSCSF
Trigger: GAAGGAACAGCTCCAGAAGCAGAAGGAGGCTGAGGG...GCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp TCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTCTATGTGCTGCTATATaGTTTGCACGCACCGTGCTC +
Preference number: 4 (lower is better)
Translates to: SLFGLHGVQAGPCRGCVGLCAAI*FARTVL
Trigger: GAGCACGGTGCGTGCAAAGCATATAGCAGCACATAG...ACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp TCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTTTCCACCTCCCAGATTaGAGCAATCCTCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: SLFGLHGVQAGPCRGCVGFHLPD*SNPPNS
Trigger: TGAGTTGGGAGGATTGCTGCAATCTGGGAGGTGGAA...ACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp TGCTCTCCAGCTGCTTTCAGTACCCAAGGCTGGTGCCCTAAACTTGAGAGCCCTGCCATCACCTCCCACTaGCCAGAGCCCCTGAGATCA +
Preference number: 4 (lower is better)
Translates to: CSPAAFSTQGWCPKLESPAITSH*PEPLRS
Trigger: TGATCTCAGGGGCTCTGGGCAGTGGGAGGTGATGGC...AGGGCTCTCAAGTTTAGGGCACCAGCCTTGGGTACTGAAAGCAGCTGGAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp GCTCTAGAGCCCTGTGGTCAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTGCCATGACAGAACATTaGCCCTTAGGAGTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: ALEPCGQSWLNCVTGPLSAMTEH*PLGVQG
Trigger: CCCCTGAACTCCTAAGGGGCAATGTTCTGTCATGGC...AGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp CACAGGTGTCCTCTCCTCTTGCTCTCCAGCTGCTTTCAGTACCCAAGGCTGGTGAGGGAAGCGCGGTGCTaGTTACAAGCGTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: HRCPLLLLSSCFQYPRLVREARC*LQACSE
Trigger: CTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCT...CACCAGCCTTGGGTACTGAAAGCAGCTGGAGAGCAAGAGGAGAGGACACCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CCAACACAGCCAACACCAAAGGAAGAAACCAGGGGCAGCGGGAGAGACAAGGAGTGGAGGCTCAGCTTGTaGGAGAAGAGCACCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PTQPTPKEETRGSGRDKEWRLSL*EKSTSP
Trigger: AGGGCTGGTGCTCTTCTCCCACAAGCTGAGCCTCCA...CTCCTTGTCTCTCCCGCTGCCCCTGGTTTCTTCCTTTGGTGTTGGCTGTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR CAA 72 bp CAGCTGCTTTCAGTACCCAAGGCTGGTGCCCTAAACTaGAGAGCCCTCCGAGGGCAGGGACCACATGTACCT +
Preference number: 4 (lower is better)
Translates to: QLLSVPKAGALN*RALRGQGPHVP
Trigger: AGGTACATGTGGTCCCTGCCCTCGGAGGGCTCTCAAGTTTAGGGCACCAGCCTTGGGTACTGAAAGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CAA 72 bp CTCAGAGGAGATGCACGGTGCCGCTTACCAGTGTGCTaGGAGGAGACACAGGTGTCCTCTCCTCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LRGDARCRLPVC*EETQVSSPLAL
Trigger: GAGAGCAAGAGGAGAGGACACCTGTGTCTCCTCCAAGCACACTGGTAAGCGGCACCGTGCATCTCCTCTGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp CCAACACAGCCAACACCAAAGGAAGAAACCAGGGGCAGCGGGAGAGACAAGGAGGGGAGGAGGTGCTATTaGGATGAGGATCTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PTQPTPKEETRGSGRDKEGRRCY*DEDLAR
Trigger: CCTGGCTAGATCCTCATCTCAATAGCACCTCCTCCC...CTCCTTGTCTCTCCCGCTGCCCCTGGTTTCTTCCTTTGGTGTTGGCTGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp CCAACACAGCCAACACCAAAGGAAGAAACCAGGGGCAGCGGGAGAGACAAGGAGCCCTCAGCCTCCTTCTaGTTCTGGAGCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PTQPTPKEETRGSGRDKEPSASF*FWSCSF
Trigger: GAAGGAACAGCTCCAGAAGCAGAAGGAGGCTGAGGG...CTCCTTGTCTCTCCCGCTGCCCCTGGTTTCTTCCTTTGGTGTTGGCTGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp TCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGCCGCAGGTTCTCGATaGTTGTGGTTTTACTGTTCA +
Preference number: 4 (lower is better)
Translates to: SLFGLHGVQAGPCRGCVGAAGSR*LWFYCS
Trigger: TGAACAGTAAAACCACAAGCATCGAGAACCTGCGGC...ACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp GCTCTAGAGCCCTGTGGTCAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTCCTGAGCCTATGTGCTaGTATATGCTTTGCACGCAC +
Preference number: 4 (lower is better)
Translates to: ALEPCGQSWLNCVTGPLSPEPMC*YMLCTH
Trigger: GTGCGTGCAAAGCATATAGCAGCACATAGGCTCAGG...AGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp AAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCTGCTGCTTACAAGCGTaGTCAGAGGAGATGCACGGT +
Preference number: 4 (lower is better)
Translates to: KKGSAVLLTSVLRGDARCCCLQA*SEEMHG
Trigger: ACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCA...GCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp CCAACACAGCCAACACCAAAGGAAGAAACCAGGGGCAGCGGGAGAGACAAGGAGAGAAGGGAAGCGCGGTaGTGCTTACAAGCGTGCTCA +
Preference number: 4 (lower is better)
Translates to: PTQPTPKEETRGSGRDKERREAR*CLQACS
Trigger: TGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCT...CTCCTTGTCTCTCCCGCTGCCCCTGGTTTCTTCCTTTGGTGTTGGCTGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CACAAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGAAAAGGCGCACTTGGTaGCAGCTGAGTTTGAACGGG +
Preference number: 4 (lower is better)
Translates to: HKKGSAVLLTSVLRGDARKRRTW*QLSLNG
Trigger: CCCGTTCAAACTCAGCTGCCACCAAGTGCGCCTTTT...CCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CTGGAGGAGGTAGTGATATCTAAGGCTGTTGGATTCCAAGGCCTAGTGACAGTCTTCGAGGGCAGAGGCTaGCTGAGCGCCGAACCACCC +
Preference number: 4 (lower is better)
Translates to: LEEVVISKAVGFQGLVTVFEGRG*LSAEPP
Trigger: GGGTGGTTCGGCGCTCAGCCAGCCTCTGCCCTCGAA...GACTGTCACTAGGCCTTGGAATCCAACAGCCTTAGATATCACTACCTCCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp GCCTTGTTGCTTCTATTGGGCATAGAAAGGAACAGCTTCCTAGAGAGGCCGCAGCCCCGTAGTGCTGCATaGCGGCATCCGCCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: ALLLLLGIERNSFLERPQPRSAA*RHPPEG
Trigger: ACCTTCAGGCGGATGCCGCCATGCAGCACTACGGGG...CTGCGGCCTCTCTAGGAAGCTGTTCCTTTCTATGCCCAATAGAAGCAACAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp GCCTTGTTGCTTCTATTGGGCATAGAAAGGAACAGCTTCCTAGAGAGGCCGCAGGCACCAGGTTGTTGGTaGCCGCCATGTGCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: ALLLLLGIERNSFLERPQAPGCW*PPCAGG
Trigger: TCCGCCAGCACATGGCGGCCACCAACAACCTGGTGC...CTGCGGCCTCTCTAGGAAGCTGTTCCTTTCTATGCCCAATAGAAGCAACAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCCCCCACACACCCTGGTaGGCAGCAGCGGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: HFSIPVTSWREALTSIIGPHTPW*AAAAAD
Trigger: GTCAGCAGCCGCTGCTGCCCACCAGGGTGTGTGGGG...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp GCTATATGCTTTGCACGCACCGTGCTCAGGAGCAGAGTTCAACCTTCATTCCTGCCTATTCGGCCTCCATaGGGTCCAGGCAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: AICFARTVLRSRVQPSFLPIRPP*GPGRAM
Trigger: CATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGG...CAGGAATGAAGGTTGAACTCTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp TGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCCGCTTACCAGTGTGCTTGGGCCGTACCCCTGCCTTaGACAGTATCTGCTGAACGT +
Preference number: 4 (lower is better)
Translates to: CLQACSEEMHGAAYQCAWAVPLP*TVSAER
Trigger: ACGTTCAGCAGATACTGTCCAAGGCAGGGGTACGGC...CCAAGCACACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CAGGTGTGGTGGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCTGCTTTCCATAATTGGCTCTaGGACAGGAAGCCTACAGAA +
Preference number: 4 (lower is better)
Translates to: QVWWACTLCPQEGKRGAAFHNWL*DRKPTE
Trigger: TTCTGTAGGCTTCCTGTCCCAGAGCCAATTATGGAA...AGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp AAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCGCTTACCAGTGTGCTTaGAGGAGACACAGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: KKGSAVLLTSVLRGDARCAYQCA*RRHRCP
Trigger: AGGACACCTGTGTCTCCTCCAAGCACACTGGTAAGC...GCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp TTTGGAGTGTTCAGTGGTGAGCCACCAAGAGTTGGGGAGCATGACCAAGAATCTCACCAGCCTTGGAGTTaGGGTTGGGATCCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: FGVFSGEPPRVGEHDQESHQPWS*GWDPGP
Trigger: GGGGCCCGGATCCCAACCCCAACTCCAAGGCTGGTG...AGATTCTTGGTCATGCTCCCCAACTCTTGGTGGCTCACCACTGAACACTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp GCCTTGTTGCTTCTATTGGGCATAGAAAGGAACAGCTTCCTAGAGAGGCCGCAGATGGCGGCATCCGCCTaGAGGTTCCTAGACCAAGGC +
Preference number: 4 (lower is better)
Translates to: ALLLLLGIERNSFLERPQMAASA*RFLDQG
Trigger: GCCTTGGTCTAGGAACCTTCAGGCGGATGCCGCCAT...CTGCGGCCTCTCTAGGAAGCTGTTCCTTTCTATGCCCAATAGAAGCAACAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp CCAACACAGCCAACACCAAAGGAAGAAACCAGGGGCAGCGGGAGAGACAAGGAGGAGGTGCTATTGAGATaGGGATCTAGCCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PTQPTPKEETRGSGRDKEEVLLR*GSSQGE
Trigger: CTCTCCCTGGCTAGATCCTCATCTCAATAGCACCTC...CTCCTTGTCTCTCCCGCTGCCCCTGGTTTCTTCCTTTGGTGTTGGCTGTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp GCCTTGTTGCTTCTATTGGGCATAGAAAGGAACAGCTTCCTAGAGAGGCCGCAGGGGACAGTCAGAGCTTaGGCCTCTGGCTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: ALLLLLGIERNSFLERPQGTVRA*ASGFQA
Trigger: GGCCTGAAAGCCAGAGGCTCAAGCTCTGACTGTCCC...CTGCGGCCTCTCTAGGAAGCTGTTCCTTTCTATGCCCAATAGAAGCAACAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp GCTCTAGAGCCCTGTGGTCAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTTCCAAGATGATGTCTTaGAATGTACAGCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ALEPCGQSWLNCVTGPLSSKMMS*NVQPAR
Trigger: CCTGGCTGGCTGTACATTTCAAGACATCATCTTGGA...AGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371956.8
CDS-3UTR GCA 90 bp GCTATATGCTTTGCACGCACCGTGCTCAGGAGCAGAGTTCAACCTTCATTCCTGTGGGCTGCCTGCTGGTaGAGGTTGTACATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: AICFARTVLRSRVQPSFLWAACW*RLYMAL
Trigger: CAGCGCCATGTACAACCTGCACCAGCAGGCAGCCCA...CAGGAATGAAGGTTGAACTCTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp TTTGCTGAGCTGGGTTTCCTGGCTATGAACAGGAACACACTTTTCCATTCCAGTTGGGGGCCTCGGCCTTaGCTTCCCCATGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: FAELGFLAMNRNTLFHSSWGPRP*LPHGSP
Trigger: AGGGCTCCCATGGGGAAGGCAAGGCCGAGGCCCCCA...ACTGGAATGGAAAAGTGTGTTCCTGTTCATAGCCAGGAAACCCAGCTCAGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp CACAGGTGTCCTCTCCTCTTGCTCTCCAGCTGCTTTCAGTACCCAAGGCTGGTGTGCTGCTATATGCTTTaGACGCACCGTGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: HRCPLLLLSSCFQYPRLVCCYML*THRAQE
Trigger: CTCCTGAGCACGGTGCGTGCAAAGCATATAGCAGCA...CACCAGCCTTGGGTACTGAAAGCAGCTGGAGAGCAAGAGGAGAGGACACCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp CAGGTGTGGTGGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCTGCTGAGTCTCATCTCTGCTaGTTTGTTCAAACACTTCTC +
Preference number: 4 (lower is better)
Translates to: QVWWACTLCPQEGKRGAAESHLC*FVQTLL
Trigger: GAGAAGTGTTTGAACAAAGCAGCAGAGATGAGACTC...AGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp GCTCTAGAGCCCTGTGGTCAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTCGAACCACCCTCAACTaGAAAATTCGTGCAGAATCG +
Preference number: 4 (lower is better)
Translates to: ALEPCGQSWLNCVTGPLSRTTLN*KIRAES
Trigger: CGATTCTGCACGAATTTTCCAGTTGAGGGTGGTTCG...AGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp TTTGCTGAGCTGGGTTTCCTGGCTATGAACAGGAACACACTTTTCCATTCCAGTAGGCCGCGTGCTGCTTaGCCCGGAGCCGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: FAELGFLAMNRNTLFHSSRPRAA*PGAAGS
Trigger: AGAACCTGCGGCTCCGGGCCAAGCAGCACGCGGCCT...ACTGGAATGGAAAAGTGTGTTCCTGTTCATAGCCAGGAAACCCAGCTCAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp CTGGAGGAGGTAGTGATATCTAAGGCTGTTGGATTCCAAGGCCTAGTGACAGTCTCTCCGAGGGAAGCTTaGGGCACCCCAGCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LEEVVISKAVGFQGLVTVSPREA*GTPASH
Trigger: GTGAGAGGCTGGGGTGCCCCAAGCTTCCCTCGGAGA...GACTGTCACTAGGCCTTGGAATCCAACAGCCTTAGATATCACTACCTCCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CATTATGCCTATGGGGAAACTGAGGCAGTGTCTACAGTGAGGCTTGTGTGTACAGGAGAATACAGAGGCTaGGCCGAGACGGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HYAYGETEAVSTVRLVCTGEYRG*AETGAG
Trigger: CCCTGCCCCCGTCTCGGCCCAGCCTCTGTATTCTCC...TGTACACACAAGCCTCACTGTAGACACTGCCTCAGTTTCCCCATAGGCATAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCGGAGAATACAGAGGCTaGGCCGAGACGGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HFSIPVTSWREALTSIIGGEYRG*AETGAG
Trigger: CCCTGCCCCCGTCTCGGCCCAGCCTCTGTATTCTCC...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp AAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCGAGAAAGATCAAGGGTaGAGAATACAGAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KKGSAVLLTSVLRGDARCEKDQG*RIQRLG
Trigger: GCCCAGCCTCTGTATTCTCCACCCTTGATCTTTCTC...GCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CTGGCTGAACTGTGTCACCGGGCCTCTGTCTTGGGAAGACTTACAGGCAGGAATACCGGGCCTCTGTCTTaGGAAGACTTACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LAELCHRASVLGRLTGRNTGPLS*EDLQAG
Trigger: TCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGT...ATTCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp CTGGCTGAACTGTGTCACCGGGCCTCTGTCTTGGGAAGACTTACAGGCAGGAATGCCGTACCCCTGCCTTaGACAGTATCTGCTGAACGT +
Preference number: 4 (lower is better)
Translates to: LAELCHRASVLGRLTGRNAVPLP*TVSAER
Trigger: ACGTTCAGCAGATACTGTCCAAGGCAGGGGTACGGC...ATTCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
3UTR CAA 72 bp TCAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTaGGGAAGACTTACAGGCAGGAATGCTGGCCATTCT +
Preference number: 4 (lower is better)
Translates to: SVLAELCHRASV*GRLTGRNAGHS
Trigger: AGAATGGCCAGCATTCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp CTCTGCAAAGCAATTCAACCAGGACACCAACAGAACCTCTCTCTTCCCACTGGGGTTCATGGCGTGCAGTaGGTAGCCGTTCACCCCGTA +
Preference number: 4 (lower is better)
Translates to: LCKAIQPGHQQNLSLPTGVHGVQ*VAVHPV
Trigger: TACGGGGTGAACGGCTACTCACTGCACGCCATGAAC...CCCAGTGGGAAGAGAGAGGTTCTGTTGGTGTCCTGGTTGAATTGCTTTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCAGGGCCTCGAGCTGCTaGGCCGTGAACGCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: QKEGNRRRATGSRKITKTRASSC*AVNAVR
Trigger: CCGCACAGCGTTCACGGCTCAGCAGCTCGAGGCCCT...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCCTGGGGCCACAGGAGTaGTGGTCAGGCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QKEGNRRRATGSRKITKTLGPQE*WSGCLG
Trigger: CCCCAGGCAGCCTGACCATCACTCCTGTGGCCCCAG...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp CTGGCTGAACTGTGTCACCGGGCCTCTGTCTTGGGAAGACTTACAGGCAGGAATTTGGACAGTATCTGCTaGACGTGGAGGCTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LAELCHRASVLGRLTGRNLDSIC*TWRLSL
Trigger: CAAGCTGAGCCTCCACGTTCAGCAGATACTGTCCAA...ATTCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp CCAACACAGCCAACACCAAAGGAAGAAACCAGGGGCAGCGGGAGAGACAAGGAGAAGAGTTGGGGAGCATaGCCAAGAATCTGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: PTQPTPKEETRGSGRDKEKSWGA*PRICPS
Trigger: GCTTGGACAGATTCTTGGTCATGCTCCCCAACTCTT...CTCCTTGTCTCTCCCGCTGCCCCTGGTTTCTTCCTTTGGTGTTGGCTGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp TGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCCGCTTACCAGTGTGCTTGGCTTCCCATGGTCTACTaGGTCTCATCTCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: CLQACSEEMHGAAYQCAWLPMVY*VSSLLL
Trigger: AAGCAGCAGAGATGAGACTCAGTAGACCATGGGAAG...CCAAGCACACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp TTTGCTGAGCTGGGTTTCCTGGCTATGAACAGGAACACACTTTTCCATTCCAGTGGGAGTGGGAGCCAGTaGCACCTCCTGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: FAELGFLAMNRNTLFHSSGSGSQ*HLLPAA
Trigger: AGCTGCAGGCAGGAGGTGGCACTGGCTCCCACTCCC...ACTGGAATGGAAAAGTGTGTTCCTGTTCATAGCCAGGAAACCCAGCTCAGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp TGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCCGCTTACCAGTGTGCTTGGCTATGTGCTGCTATATaGTTTGCACGCACCGTGCTC +
Preference number: 4 (lower is better)
Translates to: CLQACSEEMHGAAYQCAWLCAAI*FARTVL
Trigger: GAGCACGGTGCGTGCAAAGCATATAGCAGCACATAG...CCAAGCACACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp CCAACACAGCCAACACCAAAGGAAGAAACCAGGGGCAGCGGGAGAGACAAGGAGTTCCACCTCCCAGATTaGAGCAATCCTCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: PTQPTPKEETRGSGRDKEFHLPD*SNPPNS
Trigger: TGAGTTGGGAGGATTGCTGCAATCTGGGAGGTGGAA...CTCCTTGTCTCTCCCGCTGCCCCTGGTTTCTTCCTTTGGTGTTGGCTGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCGCTGGGTATCTGGAGTaGGGGCCTCGGCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: HFSIPVTSWREALTSIIGAGYLE*GPRPCL
Trigger: AAGGCAAGGCCGAGGCCCCCACTCCAGATACCCAGC...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp CTGGCACGACCTCTAAGCACAAATGGTCACAAAACAGCTGGTTTGGAAAGCAGTGCACCAGGTTGTTGGTaGCCGCCATGTGCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: LARPLSTNGHKTAGLESSAPGCW*PPCAGG
Trigger: TCCGCCAGCACATGGCGGCCACCAACAACCTGGTGC...ACTGCTTTCCAAACCAGCTGTTTTGTGACCATTTGTGCTTAGAGGTCGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CTGGAGGAGGTAGTGATATCTAAGGCTGTTGGATTCCAAGGCCTAGTGACAGTCAGTGCACCAGGTTGTTaGTGGCCGCCATGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LEEVVISKAVGFQGLVTVSAPGC*WPPCAG
Trigger: GCCAGCACATGGCGGCCACCAACAACCTGGTGCACT...GACTGTCACTAGGCCTTGGAATCCAACAGCCTTAGATATCACTACCTCCTCCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp GCTATATGCTTTGCACGCACCGTGCTCAGGAGCAGAGTTCAACCTTCATTCCTGCCTAAGACCCCTGGCTaGGTTGGAAGCCAGACAGTC +
Preference number: 4 (lower is better)
Translates to: AICFARTVLRSRVQPSFLPKTPG*VGSQTV
Trigger: GACTGTCTGGCTTCCAACCCAGCCAGGGGTCTTAGG...CAGGAATGAAGGTTGAACTCTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp TGGATTCCAAGGCCTAGTGACAGTCACTTGTACCCAGGAACTGACAAAAAGCTTCTTTCAGGCCCAGGTTaGCCCAGCAGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: WIPRPSDSHLYPGTDKKLLSGPG*PSRPGR
Trigger: CCTCCCAGGCCTGCTGGGCCAACCTGGGCCTGAAAG...AAGCTTTTTGTCAGTTCCTGGGTACAAGTGACTGTCACTAGGCCTTGGAATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp CAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACAGATACAAGGGCAGAGGCTGGCTaGGCGCCGAACCACCCTCAA +
Preference number: 4 (lower is better)
Translates to: QRTGHNITGNETDRRTDTRAEAG*APNHPQ
Trigger: TTGAGGGTGGTTCGGCGCTCAGCCAGCCTCTGCCCT...TGTATCTGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp GCTATATGCTTTGCACGCACCGTGCTCAGGAGCAGAGTTCAACCTTCATTCCTGGGTTGTACATGGCGCTaGGTGAGTTCATGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: AICFARTVLRSRVQPSFLGCTWR*VSSWRA
Trigger: TGCACGCCATGAACTCACTCAGCGCCATGTACAACC...CAGGAATGAAGGTTGAACTCTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCGGACTGGCAGTGCAGTaGGCCCAGCGGGGCCATGTT +
Preference number: 4 (lower is better)
Translates to: QKEGNRRRATGSRKITKTGLAVQ*AQRGHV
Trigger: AACATGGCCCCGCTGGGCTCACTGCACTGCCAGTCC...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp TGGATTCCAAGGCCTAGTGACAGTCACTTGTACCCAGGAACTGACAAAAAGCTTGGCAGCAGCGGCTGCTaGCAGGGACTGGTAGTAGGA +
Preference number: 4 (lower is better)
Translates to: WIPRPSDSHLYPGTDKKLGSSGC*QGLVVG
Trigger: TCCTACTACCAGTCCCTGTCAGCAGCCGCTGCTGCC...AAGCTTTTTGTCAGTTCCTGGGTACAAGTGACTGTCACTAGGCCTTGGAATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp CACAAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGAGAGAAAGTAATTCATaGCGCCTTCTAGATGCCAGC +
Preference number: 4 (lower is better)
Translates to: HKKGSAVLLTSVLRGDARRESNS*RLLDAS
Trigger: GCTGGCATCTAGAAGGCGTCATGAATTACTTTCTCT...CCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp AAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCCAAATCCAGATTGCCTaGACTAGAAGGGACCCATTA +
Preference number: 4 (lower is better)
Translates to: KKGSAVLLTSVLRGDARCQIQIA*TRRDPL
Trigger: TAATGGGTCCCTTCTAGTTCAGGCAATCTGGATTTG...GCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp CTCTGCAAAGCAATTCAACCAGGACACCAACAGAACCTCTCTCTTCCCACTGGGGACCCCCATCAAGGGTaGTGGGCATTGACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LCKAIQPGHQQNLSLPTGDPHQG*WALTSL
Trigger: CAGAGAAGTCAATGCCCATCACCCTTGATGGGGGTC...CCCAGTGGGAAGAGAGAGGTTCTGTTGGTGTCCTGGTTGAATTGCTTTGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp GCTCTAGAGCCCTGTGGTCAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTCAACTGGAAAATTCGTaGAGAATCGCAATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: ALEPCGQSWLNCVTGPLSQLENS*RIAIQR
Trigger: TCTCTGGATTGCGATTCTGCACGAATTTTCCAGTTG...AGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp TTTGCTGAGCTGGGTTTCCTGGCTATGAACAGGAACACACTTTTCCATTCCAGTAATCTGCCTTGGGGCTaGCCCTCTTGCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: FAELGFLAMNRNTLFHSSNLPWG*PSCSPA
Trigger: GGCTGGGCTGCAAGAGGGGCAGCCCCAAGGCAGATT...ACTGGAATGGAAAAGTGTGTTCCTGTTCATAGCCAGGAAACCCAGCTCAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp CATTATGCCTATGGGGAAACTGAGGCAGTGTCTACAGTGAGGCTTGTGTGTACATTGGTGGCCGCCATGTaGTGGCGGAATTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HYAYGETEAVSTVRLVCTLVAAM*WRNCSC
Trigger: GCAGGAGCAATTCCGCCAGCACATGGCGGCCACCAA...TGTACACACAAGCCTCACTGTAGACACTGCCTCAGTTTCCCCATAGGCATAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp TTTGCTGAGCTGGGTTTCCTGGCTATGAACAGGAACACACTTTTCCATTCCAGTGTGCCACCTCCTGCCTaGAGCTCCAGATCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: FAELGFLAMNRNTLFHSSVPPPA*SSRSPE
Trigger: CTCTGGGGATCTGGAGCTGCAGGCAGGAGGTGGCAC...ACTGGAATGGAAAAGTGTGTTCCTGTTCATAGCCAGGAAACCCAGCTCAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCGATGGTCAGGCTGCCTaGGGAATCTGCCTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: HFSIPVTSWREALTSIIGDGQAA*GICLGA
Trigger: AGCCCCAAGGCAGATTCCCCAGGCAGCCTGACCATC...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCGTGGCCGCCATGTGCTaGCGGAATTGCTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: HFSIPVTSWREALTSIIGVAAMC*RNCSCR
Trigger: TCTGCAGGAGCAATTCCGCCAGCACATGGCGGCCAC...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCCCCTGTGGTCAGTCCTaGCTGAACTGTGTCACCGGG +
Preference number: 4 (lower is better)
Translates to: HFSIPVTSWREALTSIIGPCGQS*LNCVTG
Trigger: CCCGGTGACACAGTTCAGCCAGGACTGACCACAGGG...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp GCCTTGTTGCTTCTATTGGGCATAGAAAGGAACAGCTTCCTAGAGAGGCCGCAGAGCTCTAGAGCCCTGTaGTCAGTCCTGGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: ALLLLLGIERNSFLERPQSSRAL*SVLAEL
Trigger: CAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGCT...CTGCGGCCTCTCTAGGAAGCTGTTCCTTTCTATGCCCAATAGAAGCAACAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp CTGGCTGAACTGTGTCACCGGGCCTCTGTCTTGGGAAGACTTACAGGCAGGAATATTCCAGTGACTAGCTaGAGGGAAGCCCTTACTTCC +
Preference number: 4 (lower is better)
Translates to: LAELCHRASVLGRLTGRNIPVTS*REALTS
Trigger: GGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAAT...ATTCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp GCTATATGCTTTGCACGCACCGTGCTCAGGAGCAGAGTTCAACCTTCATTCCTGCTCCTCTGTCACTCCTaGAATCTGCCAACCTCCCAC +
Preference number: 4 (lower is better)
Translates to: AICFARTVLRSRVQPSFLLLCHS*NLPTSH
Trigger: GTGGGAGGTTGGCAGATTCCAGGAGTGACAGAGGAG...CAGGAATGAAGGTTGAACTCTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCCCTTGGAGTTGGGGTTaGGATCCGGGCCCCTGGACC +
Preference number: 4 (lower is better)
Translates to: QKEGNRRRATGSRKITKTPWSWG*DPGPWT
Trigger: GGTCCAGGGGCCCGGATCCCAACCCCAACTCCAAGG...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CAA 72 bp CAGGGTTTGGAGTGTTCAGTGGTGAGCCACCAAGAGTaGGGGAGCATGACCAAGAATCTGTCCAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: QGLECSVVSHQE*GSMTKNLSKPS
Trigger: TGATGGCTTGGACAGATTCTTGGTCATGCTCCCCAACTCTTGGTGGCTCACCACTGAACACTCCAAACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCGTGGTCAGTCCTGGCTaGACTGTGTCACCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: QKEGNRRRATGSRKITKTVVSPG*TVSPGL
Trigger: GAGGCCCGGTGACACAGTTCAGCCAGGACTGACCAC...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp GCCTTGTTGCTTCTATTGGGCATAGAAAGGAACAGCTTCCTAGAGAGGCCGCAGACTTTTCCATTCCAGTaGCTAGCTGGAGGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: ALLLLLGIERNSFLERPQTFPFQ*LAGGKP
Trigger: GGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGT...CTGCGGCCTCTCTAGGAAGCTGTTCCTTTCTATGCCCAATAGAAGCAACAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp CTGGCTGAACTGTGTCACCGGGCCTCTGTCTTGGGAAGACTTACAGGCAGGAATTGGGTTTCCTGGCTATaGACAGGAACACACTTTTCC +
Preference number: 4 (lower is better)
Translates to: LAELCHRASVLGRLTGRNWVSWL*TGTHFS
Trigger: GGAAAAGTGTGTTCCTGTTCATAGCCAGGAAACCCA...ATTCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp TTTGGAGTGTTCAGTGGTGAGCCACCAAGAGTTGGGGAGCATGACCAAGAATCTTGGAGTGTTCAGTGGTaGGCCACCAAGAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: FGVFSGEPPRVGEHDQESWSVQW*ATKSWG
Trigger: TCCCCAACTCTTGGTGGCTCACCACTGAACACTCCA...AGATTCTTGGTCATGCTCCCCAACTCTTGGTGGCTCACCACTGAACACTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp TGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCCGCTTACCAGTGTGCTTGGAAGGGTGATGGGCATTaGCTTCTCTGCAAAGCAATT +
Preference number: 4 (lower is better)
Translates to: CLQACSEEMHGAAYQCAWKGDGH*LLCKAI
Trigger: AATTGCTTTGCAGAGAAGTCAATGCCCATCACCCTT...CCAAGCACACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp TGGATTCCAAGGCCTAGTGACAGTCACTTGTACCCAGGAACTGACAAAAAGCTTCCTAAGTCTCTCCTCTaGTGCCCCCATGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: WIPRPSDSHLYPGTDKKLPKSLL*CPHGWW
Trigger: CCACCAGCCATGGGGGCATCAGAGGAGAGACTTAGG...AAGCTTTTTGTCAGTTCCTGGGTACAAGTGACTGTCACTAGGCCTTGGAATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp GCCTTGTTGCTTCTATTGGGCATAGAAAGGAACAGCTTCCTAGAGAGGCCGCAGGTGTTAACAAACATCTaGGGGAAGCTCGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ALLLLLGIERNSFLERPQVLTNI*GKLGCS
Trigger: GGAGCAGCCGAGCTTCCCTCAGATGTTTGTTAACAC...CTGCGGCCTCTCTAGGAAGCTGTTCCTTTCTATGCCCAATAGAAGCAACAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp CTCTGCAAAGCAATTCAACCAGGACACCAACAGAACCTCTCTCTTCCCACTGGGTGGAGCTGTTCCTTCTaGAGGCTACGCTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LCKAIQPGHQQNLSLPTGWSCSF*RLRCFF
Trigger: GAAGAAGCAGCGTAGCCTGCAGAAGGAACAGCTCCA...CCCAGTGGGAAGAGAGAGGTTCTGTTGGTGTCCTGGTTGAATTGCTTTGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp CAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACAGATACAGGCAGACGTGGGGGCTaGTCAGTGTCCAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: QRTGHNITGNETDRRTDTGRRGG*SVSSWV
Trigger: TACCCAGCTGGACACTGAGCAGCCCCCACGTCTGCC...TGTATCTGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp TTTGCTGAGCTGGGTTTCCTGGCTATGAACAGGAACACACTTTTCCATTCCAGTGTCCAGGCAGGGCCATaGAGAGGGTGTGTAGGTGTG +
Preference number: 4 (lower is better)
Translates to: FAELGFLAMNRNTLFHSSVQAGP*RGCVGV
Trigger: CACACCTACACACCCTCTGCATGGCCCTGCCTGGAC...ACTGGAATGGAAAAGTGTGTTCCTGTTCATAGCCAGGAAACCCAGCTCAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp CAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACAGATACAGTGCCACCTCCTGCCTaGAGCTCCAGATCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: QRTGHNITGNETDRRTDTVPPPA*SSRSPE
Trigger: CTCTGGGGATCTGGAGCTGCAGGCAGGAGGTGGCAC...TGTATCTGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp GCTATATGCTTTGCACGCACCGTGCTCAGGAGCAGAGTTCAACCTTCATTCCTGAGTACACAGTGTCTTTaGCATGGGCTGGCACGACCT +
Preference number: 4 (lower is better)
Translates to: AICFARTVLRSRVQPSFLSTQCL*HGLARP
Trigger: AGGTCGTGCCAGCCCATGGCAAAGACACTGTGTACT...CAGGAATGAAGGTTGAACTCTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCGGGCCTCAGGCAGGTTaGTGCACATGGCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: QKEGNRRRATGSRKITKTGPQAG*CTWPAS
Trigger: AGAGGCTGGCCATGTGCACCAACCTGCCTGAGGCCC...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCGTCCAGCTGGGTATCTaGAGTGGGGGCCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: QKEGNRRRATGSRKITKTVQLGI*SGGLGL
Trigger: AAGGCCGAGGCCCCCACTCCAGATACCCAGCTGGAC...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp TGGATTCCAAGGCCTAGTGACAGTCACTTGTACCCAGGAACTGACAAAAAGCTTGATGGTCAGGCTGCCTaGGGAATCTGCCTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: WIPRPSDSHLYPGTDKKLDGQAA*GICLGA
Trigger: AGCCCCAAGGCAGATTCCCCAGGCAGCCTGACCATC...AAGCTTTTTGTCAGTTCCTGGGTACAAGTGACTGTCACTAGGCCTTGGAATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CACAGGTGTCCTCTCCTCTTGCTCTCCAGCTGCTTTCAGTACCCAAGGCTGGTGAGAGACCTGAGGATTTaGAAACCCTCAAATGCCTGT +
Preference number: 4 (lower is better)
Translates to: HRCPLLLLSSCFQYPRLVRDLRI*KPSNAC
Trigger: ACAGGCATTTGAGGGTTTCCAAATCCTCAGGTCTCT...CACCAGCCTTGGGTACTGAAAGCAGCTGGAGAGCAAGAGGAGAGGACACCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CTCTGCAAAGCAATTCAACCAGGACACCAACAGAACCTCTCTCTTCCCACTGGGACAGTGTCTTTGCCATaGGCTGGCACGACCTCTAAG +
Preference number: 4 (lower is better)
Translates to: LCKAIQPGHQQNLSLPTGTVSLP*AGTTSK
Trigger: CTTAGAGGTCGTGCCAGCCCATGGCAAAGACACTGT...CCCAGTGGGAAGAGAGAGGTTCTGTTGGTGTCCTGGTTGAATTGCTTTGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp AAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCAAATCCTCACGGTCCGGCTaGTCCTCGGGGGCTGACTCA +
Preference number: 4 (lower is better)
Translates to: KEGNRRRATGSRKITKTKSSRSG*SSGADS
Trigger: TGAGTCAGCCCCCGAGGATCAGCCGGACCGTGAGGA...TTTGGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp TTTGGAGTGTTCAGTGGTGAGCCACCAAGAGTTGGGGAGCATGACCAAGAATCTCCCCAGCAAGAGACCTaGGGATTTGGAAACCCTCAA +
Preference number: 4 (lower is better)
Translates to: FGVFSGEPPRVGEHDQESPQQET*GFGNPQ
Trigger: TTGAGGGTTTCCAAATCCTCAGGTCTCTTGCTGGGG...AGATTCTTGGTCATGCTCCCCAACTCTTGGTGGCTCACCACTGAACACTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp CTCTGCAAAGCAATTCAACCAGGACACCAACAGAACCTCTCTCTTCCCACTGGGATCCCAGAGGACAGTTaGTGGGCTATTGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: LCKAIQPGHQQNLSLPTGIPEDS*WAIGHK
Trigger: TTTGTGGCCAATAGCCCATCAACTGTCCTCTGGGAT...CCCAGTGGGAAGAGAGAGGTTCTGTTGGTGTCCTGGTTGAATTGCTTTGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCATGTGCTGGCGGAATTaGTCCTGCAGACGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: HFSIPVTSWREALTSIIGMCWRN*SCRRKR
Trigger: CCTCTTCCGTCTGCAGGAGCAATTCCGCCAGCACAT...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp TGCTCTCCAGCTGCTTTCAGTACCCAAGGCTGGTGCCCTAAACTTGAGAGCCCTTGCTGGCCATTCTACTaGCTTCCCAGATTAACTACT +
Preference number: 4 (lower is better)
Translates to: CSPAAFSTQGWCPKLESPCWPFY*LPRLTT
Trigger: AGTAGTTAATCTGGGAAGGCAGTAGAATGGCCAGCA...AGGGCTCTCAAGTTTAGGGCACCAGCCTTGGGTACTGAAAGCAGCTGGAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp GCCTTGTTGCTTCTATTGGGCATAGAAAGGAACAGCTTCCTAGAGAGGCCGCAGCCTGAGCCTATGTGCTaGTATATGCTTTGCACGCAC +
Preference number: 4 (lower is better)
Translates to: ALLLLLGIERNSFLERPQPEPMC*YMLCTH
Trigger: GTGCGTGCAAAGCATATAGCAGCACATAGGCTCAGG...CTGCGGCCTCTCTAGGAAGCTGTTCCTTTCTATGCCCAATAGAAGCAACAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp CACAAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGTCTGTGTTACAAGGTTaGGAGCAAATGCAGAATGTA +
Preference number: 4 (lower is better)
Translates to: HKKGSAVLLTSVLRGDARSVLQG*EQMQNV
Trigger: TACATTCTGCATTTGCTCGCAACCTTGTAACACAGA...CCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp TTTGCTGAGCTGGGTTTCCTGGCTATGAACAGGAACACACTTTTCCATTCCAGTGTCACTCCTGGAATCTaGCAACCTCCCACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: FAELGFLAMNRNTLFHSSVTPGI*QPPTAL
Trigger: CAGCGCTGTGGGAGGTTGGCAGATTCCAGGAGTGAC...ACTGGAATGGAAAAGTGTGTTCCTGTTCATAGCCAGGAAACCCAGCTCAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCTGCTGGGCTGCCTGCTaGTGCAGGTTGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: QKEGNRRRATGSRKITKTCWAAC*CRLYMA
Trigger: CGCCATGTACAACCTGCACCAGCAGGCAGCCCAGCA...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp GCTATATGCTTTGCACGCACCGTGCTCAGGAGCAGAGTTCAACCTTCATTCCTGGAGAAAGATCAAGGGTaGAGAATACAGAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AICFARTVLRSRVQPSFLEKDQG*RIQRLG
Trigger: GCCCAGCCTCTGTATTCTCCACCCTTGATCTTTCTC...CAGGAATGAAGGTTGAACTCTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp GTAAGACAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACACCCTGTGGTCAGTCCTaGCTGAACTGTGTCACCGGG +
Preference number: 4 (lower is better)
Translates to: VRQRTGHNITGNETDRRTPCGQS*LNCVTG
Trigger: CCCGGTGACACAGTTCAGCCAGGACTGACCACAGGG...TGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTGTCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp GCCTTGTTGCTTCTATTGGGCATAGAAAGGAACAGCTTCCTAGAGAGGCCGCAGAGTGACTCCAGAGGCTaGCACTGGAACTCAAGATCA +
Preference number: 4 (lower is better)
Translates to: ALLLLLGIERNSFLERPQSDSRG*HWNSRS
Trigger: TGATCTTGAGTTCCAGTGCCAGCCTCTGGAGTCACT...CTGCGGCCTCTCTAGGAAGCTGTTCCTTTCTATGCCCAATAGAAGCAACAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CAA 72 bp GAAACAGAACTTCCTGGGGCTAATCCCAGAGGACAGTaGATGGGCTATTGGCCACAAAATCCCTCCCAAACC +
Preference number: 4 (lower is better)
Translates to: ETELPGANPRGQ*MGYWPQNPSQT
Trigger: GGTTTGGGAGGGATTTTGTGGCCAATAGCCCATCAACTGTCCTCTGGGATTAGCCCCAGGAAGTTCTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCGTTCATGGCGTGCAGTaGGTAGCCGTTCACCCCGTA +
Preference number: 4 (lower is better)
Translates to: QKEGNRRRATGSRKITKTVHGVQ*VAVHPV
Trigger: TACGGGGTGAACGGCTACTCACTGCACGCCATGAAC...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp AAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCAAAGGCAGCAGCGGCTGCTaGCAGGGACTGGTAGTAGGA +
Preference number: 4 (lower is better)
Translates to: KEGNRRRATGSRKITKTKGSSGC*QGLVVG
Trigger: TCCTACTACCAGTCCCTGTCAGCAGCCGCTGCTGCC...TTTGGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp AAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCAAAGTGGTCAGTCCTGGCTaGACTGTGTCACCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: KEGNRRRATGSRKITKTKVVSPG*TVSPGL
Trigger: GAGGCCCGGTGACACAGTTCAGCCAGGACTGACCAC...TTTGGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp GCCTTGTTGCTTCTATTGGGCATAGAAAGGAACAGCTTCCTAGAGAGGCCGCAGTGGGTTTCCTGGCTATaGACAGGAACACACTTTTCC +
Preference number: 4 (lower is better)
Translates to: ALLLLLGIERNSFLERPQWVSWL*TGTHFS
Trigger: GGAAAAGTGTGTTCCTGTTCATAGCCAGGAAACCCA...CTGCGGCCTCTCTAGGAAGCTGTTCCTTTCTATGCCCAATAGAAGCAACAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp TGGATTCCAAGGCCTAGTGACAGTCACTTGTACCCAGGAACTGACAAAAAGCTTGGCTGCGACGTTGTTTaGGGTGCTGGGAACCATAAC +
Preference number: 4 (lower is better)
Translates to: WIPRPSDSHLYPGTDKKLGCDVV*GAGNHN
Trigger: GTTATGGTTCCCAGCACCGCAAACAACGTCGCAGCC...AAGCTTTTTGTCAGTTCCTGGGTACAAGTGACTGTCACTAGGCCTTGGAATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCAGTACCCAAGGCTGGTaGCCTAAACTTGAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: HFSIPVTSWREALTSIIGSTQGW*PKLESP
Trigger: AGGGCTCTCAAGTTTAGGGCACCAGCCTTGGGTACT...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp CTGGCACGACCTCTAAGCACAAATGGTCACAAAACAGCTGGTTTGGAAAGCAGTGGTGTCCTCTCCTCTTaGTCTCCAGCTGCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LARPLSTNGHKTAGLESSGVLSS*SPAAFS
Trigger: ACTGAAAGCAGCTGGAGAGCAAGAGGAGAGGACACC...ACTGCTTTCCAAACCAGCTGTTTTGTGACCATTTGTGCTTAGAGGTCGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCCGTGCTCAGAGGAGATaGACGGTGCCGCTTACCAGT +
Preference number: 4 (lower is better)
Translates to: QKEGNRRRATGSRKITKTRAQRR*TVPLTS
Trigger: ACTGGTAAGCGGCACCGTGCATCTCCTCTGAGCACG...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp AAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCAAACCTATTCGGCCTCCATaGGGTCCAGGCAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: KEGNRRRATGSRKITKTKPIRPP*GPGRAM
Trigger: CATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGG...TTTGGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp TGGATTCCAAGGCCTAGTGACAGTCACTTGTACCCAGGAACTGACAAAAAGCTTACCGGGCCTCTGTCTTaGGAAGACTTACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: WIPRPSDSHLYPGTDKKLTGPLS*EDLQAG
Trigger: TCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGT...AAGCTTTTTGTCAGTTCCTGGGTACAAGTGACTGTCACTAGGCCTTGGAATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCTGGAGGCTCAGCTTGTaGGAGAAGAGCACCAGCCCT +
Preference number: 4 (lower is better)
Translates to: QKEGNRRRATGSRKITKTWRLSL*EKSTSP
Trigger: AGGGCTGGTGCTCTTCTCCCACAAGCTGAGCCTCCA...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp CAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACAGATACACAGAGCTTGAGCCTCTaGCTTTCAGGCCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: QRTGHNITGNETDRRTDTQSLSL*LSGPGW
Trigger: CCAACCTGGGCCTGAAAGCCAGAGGCTCAAGCTCTG...TGTATCTGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CAA 72 bp CCTTCCCATGGTCTACTGAGTCTCATCTCTGCTGCTTaGTTCAAACACTTCTCCTGGCCTAGACTACCATCC +
Preference number: 4 (lower is better)
Translates to: PSHGLLSLISAA*FKHFSWPRLPS
Trigger: GGATGGTAGTCTAGGCCAGGAGAAGTGTTTGAACAAAGCAGCAGAGATGAGACTCAGTAGACCATGGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp CTGGAGGAGGTAGTGATATCTAAGGCTGTTGGATTCCAAGGCCTAGTGACAGTCAAGCCTACAGAAGCCTaGGCCTATGTGCTGCTATAT +
Preference number: 4 (lower is better)
Translates to: LEEVVISKAVGFQGLVTVKPTEA*AYVLLY
Trigger: ATATAGCAGCACATAGGCTCAGGCTTCTGTAGGCTT...GACTGTCACTAGGCCTTGGAATCCAACAGCCTTAGATATCACTACCTCCTCCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp AAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCAAATGGGCTGCCTGCTGGTaGAGGTTGTACATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: KEGNRRRATGSRKITKTKWAACW*RLYMAL
Trigger: CAGCGCCATGTACAACCTGCACCAGCAGGCAGCCCA...TTTGGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCGGCTGCGACGTTGTTTaGGGTGCTGGGAACCATAAC +
Preference number: 4 (lower is better)
Translates to: QKEGNRRRATGSRKITKTGCDVV*GAGNHN
Trigger: GTTATGGTTCCCAGCACCGCAAACAACGTCGCAGCC...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp CATTATGCCTATGGGGAAACTGAGGCAGTGTCTACAGTGAGGCTTGTGTGTACAATGATCTCGGCTCACTaGAACTTCCACCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: HYAYGETEAVSTVRLVCTMISAH*NFHLPD
Trigger: ATCTGGGAGGTGGAAGTTGCAGTGAGCCGAGATCAT...TGTACACACAAGCCTCACTGTAGACACTGCCTCAGTTTCCCCATAGGCATAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp CTGGCTGAACTGTGTCACCGGGCCTCTGTCTTGGGAAGACTTACAGGCAGGAATACTGAGTCTCATCTCTaGTGCTTTGTTCAAACACTT +
Preference number: 4 (lower is better)
Translates to: LAELCHRASVLGRLTGRNTESHL*CFVQTL
Trigger: AAGTGTTTGAACAAAGCAGCAGAGATGAGACTCAGT...ATTCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCCACATGTACCTTCCCTaGCTTCTCTGGCAGATTTGG +
Preference number: 4 (lower is better)
Translates to: HFSIPVTSWREALTSIIGHMYLP*LLWQIW
Trigger: CCAAATCTGCCAGAGAAGGCAGGGAAGGTACATGTG...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CTGGCACGACCTCTAAGCACAAATGGTCACAAAACAGCTGGTTTGGAAAGCAGTGAGAAAAGGCGCACTTaGTGGCAGCTGAGTTTGAAC +
Preference number: 4 (lower is better)
Translates to: LARPLSTNGHKTAGLESSEKRRT*WQLSLN
Trigger: GTTCAAACTCAGCTGCCACCAAGTGCGCCTTTTCTC...ACTGCTTTCCAAACCAGCTGTTTTGTGACCATTTGTGCTTAGAGGTCGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp TCCACTAACAGAATAAATAAATACAGTACACAGTGTCTTTGCCATGGGCTGGCAGTGGCCGCCATGTGCTaGCGGAATTGCTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: STNRINKYSTQCLCHGLAVAAMC*RNCSCR
Trigger: TCTGCAGGAGCAATTCCGCCAGCACATGGCGGCCAC...TGCCAGCCCATGGCAAAGACACTGTGTACTGTATTTATTTATTCTGTTAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp AAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCAAAAGTGCACCAGGTTGTTaGTGGCCGCCATGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KEGNRRRATGSRKITKTKSAPGC*WPPCAG
Trigger: GCCAGCACATGGCGGCCACCAACAACCTGGTGCACT...TTTGGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCAGCCAGACAGTCAGTTaGGCAGCGTATCGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: QKEGNRRRATGSRKITKTSQTVS*AAYRVP
Trigger: TGGGACTCGATACGCTGCCCAACTGACTGTCTGGCT...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCATTCCAGTGACTAGCTaGAGGGAAGCCCTTACTTCC +
Preference number: 4 (lower is better)
Translates to: HFSIPVTSWREALTSIIGIPVTS*REALTS
Trigger: GGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAAT...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp TTTGGAGTGTTCAGTGGTGAGCCACCAAGAGTTGGGGAGCATGACCAAGAATCTCAGTTGATGGGCTATTaGCCACAAAATCCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: FGVFSGEPPRVGEHDQESQLMGY*PQNPSQ
Trigger: TTGGGAGGGATTTTGTGGCCAATAGCCCATCAACTG...AGATTCTTGGTCATGCTCCCCAACTCTTGGTGGCTCACCACTGAACACTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CTGGCACGACCTCTAAGCACAAATGGTCACAAAACAGCTGGTTTGGAAAGCAGTTTCAGTACCCAAGGCTaGTGCCCTAAACTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: LARPLSTNGHKTAGLESSFSTQG*CPKLES
Trigger: GCTCTCAAGTTTAGGGCACCAGCCTTGGGTACTGAA...ACTGCTTTCCAAACCAGCTGTTTTGTGACCATTTGTGCTTAGAGGTCGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp TCCACTAACAGAATAAATAAATACAGTACACAGTGTCTTTGCCATGGGCTGGCATGGCGGAATTGCTCCTaGAGACGGAAGAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: STNRINKYSTQCLCHGLAWRNCS*RRKRLS
Trigger: GCTGAGCCTCTTCCGTCTGCAGGAGCAATTCCGCCA...TGCCAGCCCATGGCAAAGACACTGTGTACTGTATTTATTTATTCTGTTAGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCGCCGCAGGTTCTCGATaGTTGTGGTTTTACTGTTCA +
Preference number: 4 (lower is better)
Translates to: HFSIPVTSWREALTSIIGAAGSR*LWFYCS
Trigger: TGAACAGTAAAACCACAAGCATCGAGAACCTGCGGC...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp CATTATGCCTATGGGGAAACTGAGGCAGTGTCTACAGTGAGGCTTGTGTGTACATTGGAAACCCTCAAATaGCTGTCTTGGTGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: HYAYGETEAVSTVRLVCTLETLK*LSWCLP
Trigger: TGGCAAGCACCAAGACAGGCATTTGAGGGTTTCCAA...TGTACACACAAGCCTCACTGTAGACACTGCCTCAGTTTCCCCATAGGCATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CTGGCACGACCTCTAAGCACAAATGGTCACAAAACAGCTGGTTTGGAAAGCAGTACGCATCACCACATCTaGGTAGTGAGTCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LARPLSTNGHKTAGLESSTHHHI*VVSLLE
Trigger: TTCCAGAAGACTCACTACCCAGATGTGGTGATGCGT...ACTGCTTTCCAAACCAGCTGTTTTGTGACCATTTGTGCTTAGAGGTCGTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCACGCATCACCACATCTaGGTAGTGAGTCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: HFSIPVTSWREALTSIIGTHHHI*VVSLLE
Trigger: TTCCAGAAGACTCACTACCCAGATGTGGTGATGCGT...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp CATTATGCCTATGGGGAAACTGAGGCAGTGTCTACAGTGAGGCTTGTGTGTACATTCAAACACTTCTCCTaGCCTAGACTACCATCCTGC +
Preference number: 4 (lower is better)
Translates to: HYAYGETEAVSTVRLVCTFKHFS*PRLPSC
Trigger: GCAGGATGGTAGTCTAGGCCAGGAGAAGTGTTTGAA...TGTACACACAAGCCTCACTGTAGACACTGCCTCAGTTTCCCCATAGGCATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCAGAGAAAGTAATTCATaGCGCCTTCTAGATGCCAGC +
Preference number: 4 (lower is better)
Translates to: HFSIPVTSWREALTSIIGRESNS*RLLDAS
Trigger: GCTGGCATCTAGAAGGCGTCATGAATTACTTTCTCT...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp AAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCAAATTCTGCAGGCTACGCTaGTTCTTCCGGAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: KEGNRRRATGSRKITKTKFCRLR*FFRNLA
Trigger: GGCCAAGTTCCGGAAGAAGCAGCGTAGCCTGCAGAA...TTTGGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp TTTGGAGTGTTCAGTGGTGAGCCACCAAGAGTTGGGGAGCATGACCAAGAATCTTCCCAGATTAACTACTaGCTCCTCAATCTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: FGVFSGEPPRVGEHDQESSQINY*LLNLGN
Trigger: ATTCCCAAGATTGAGGAGGCAGTAGTTAATCTGGGA...AGATTCTTGGTCATGCTCCCCAACTCTTGGTGGCTCACCACTGAACACTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCTTCCATAATTGGCTCTaGGACAGGAAGCCTACAGAA +
Preference number: 4 (lower is better)
Translates to: HFSIPVTSWREALTSIIGFHNWL*DRKPTE
Trigger: TTCTGTAGGCTTCCTGTCCCAGAGCCAATTATGGAA...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR TCA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCAACGGGCCTCCAAGATaGTGTCTTGAAATGTACAGC +
Preference number: 4 (lower is better)
Translates to: QKEGNRRRATGSRKITKTNGPPR*CLEMYS
Trigger: GCTGTACATTTCAAGACATCATCTTGGAGGCCCGTT...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371956.8
CDS-3UTR GCA 90 bp AAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCAAATGCTGCTATATGCTTTaGACGCACCGTGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: KEGNRRRATGSRKITKTKCCYML*THRAQE
Trigger: CTCCTGAGCACGGTGCGTGCAAAGCATATAGCAGCA...TTTGGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp GTAAGACAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACATCCAGAGGCTGGCACTaGAACTCAAGATCAAATCCA +
Preference number: 4 (lower is better)
Translates to: VRQRTGHNITGNETDRRTSRGWH*NSRSNP
Trigger: TGGATTTGATCTTGAGTTCCAGTGCCAGCCTCTGGA...TGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTGTCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CCA 90 bp GTAAGACAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACACTCAAATGCCTGTCTTaGTGCTTGCCACATGTAGGT +
Preference number: 4 (lower is better)
Translates to: VRQRTGHNITGNETDRRTLKCLS*CLPHVG
Trigger: ACCTACATGTGGCAAGCACCAAGACAGGCATTTGAG...TGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTGTCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
3UTR CAA 72 bp GTACCTTCCCTGCCTTCTCTGGCAGATTTGGGTCAATaGAATGGGACAAGTGTTAACAAACATCTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: VPSLPSLADLGQ*NGTSVNKHLRE
Trigger: TTCCCTCAGATGTTTGTTAACACTTGTCCCATTCAATTGACCCAAATCTGCCAGAGAAGGCAGGGAAGGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR TCA 90 bp CAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACAGATACAGAGCCCCTGAGATCATaGAAAGGTATGAAAATGGAG +
Preference number: 4 (lower is better)
Translates to: QRTGHNITGNETDRRTDTEPLRS*KGMKME
Trigger: CTCCATTTTCATACCTTTTCATGATCTCAGGGGCTC...TGTATCTGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCTGCTGGCCATTCTACTaGCTTCCCAGATTAACTACT +
Preference number: 4 (lower is better)
Translates to: QKEGNRRRATGSRKITKTCWPFY*LPRLTT
Trigger: AGTAGTTAATCTGGGAAGGCAGTAGAATGGCCAGCA...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp AAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCAAAATGATCTCGGCTCACTaGAACTTCCACCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: KEGNRRRATGSRKITKTKMISAH*NFHLPD
Trigger: ATCTGGGAGGTGGAAGTTGCAGTGAGCCGAGATCAT...TTTGGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCTCCCAGATTAACTACTaGCTCCTCAATCTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: QKEGNRRRATGSRKITKTSQINY*LLNLGN
Trigger: ATTCCCAAGATTGAGGAGGCAGTAGTTAATCTGGGA...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR GCA 90 bp TCCACTAACAGAATAAATAAATACAGTACACAGTGTCTTTGCCATGGGCTGGCAACTTACAGGCAGGAATaGTGGCCATTCTACTGCCTT +
Preference number: 4 (lower is better)
Translates to: STNRINKYSTQCLCHGLATYRQE*WPFYCL
Trigger: AAGGCAGTAGAATGGCCAGCATTCCTGCCTGTAAGT...TGCCAGCCCATGGCAAAGACACTGTGTACTGTATTTATTTATTCTGTTAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR GCA 90 bp AAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCAAAACTTACAGGCAGGAATaGTGGCCATTCTACTGCCTT +
Preference number: 4 (lower is better)
Translates to: KEGNRRRATGSRKITKTKTYRQE*WPFYCL
Trigger: AAGGCAGTAGAATGGCCAGCATTCCTGCCTGTAAGT...TTTGGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CCA 90 bp AAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCAAAACCTCTAAGCACAAATaGTCACAAAACAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: KEGNRRRATGSRKITKTKTSKHK*SQNSWF
Trigger: AAACCAGCTGTTTTGTGACCATTTGTGCTTAGAGGT...TTTGGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGGCCTTGGAGTTGGGGTaGGGATCCGGGCCCCTGGAC +
Preference number: 5 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGALELG*GSGPLD
Trigger: GTCCAGGGGCCCGGATCCCAACCCCAACTCCAAGGC...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS CCA 90 bp GGGACACCTAAGACCCCTGGCTGGGTTGGAAGCCAGACAGTCAGTTaGGCAGCGTATCGAGTCCCAGGGAGGCCGCGTGCTGCTTGGCCC +
Preference number: 5 (lower is better)
Translates to: GTPKTPGWVGSQTVS*AAYRVPGRPRAAWP
Trigger: GGGCCAAGCAGCACGCGGCCTCCCTGGGACTCGATACGCTGCCCAACTGACTGTCTGGCTTCCAACCCAGCCAGGGGTCTTAGGTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS GCA 90 bp GCTGCTCAGTGTCCAGCTGGGTATCTGGAGTGGGGGCCTCGGCCTTaGCTTCCCCATGGGAGCCCTCAGCCTCCTTCTGCTTCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: AAQCPAGYLEWGPRP*LPHGSPQPPSASGA
Trigger: AGCTCCAGAAGCAGAAGGAGGCTGAGGGCTCCCATGGGGAAGGCAAGGCCGAGGCCCCCACTCCAGATACCCAGCTGGACACTGAGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS TCA 90 bp CAAGATGATGTCAGCCAGGCGCTCAGCCAATGTAAGCGCATGCACTaGAGGCCGGTAGTCGGGGGCATGCTGGGCCTGCTGGGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: QDDVSQALSQCKRMH*RPVVGGMLGLLGCL
Trigger: CAGGCAGCCCAGCAGGCCCAGCATGCCCCCGACTACCGGCCTTCAGTGCATGCGCTTACATTGGCTGAGCGCCTGGCTGACATCATCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS TCA 90 bp AAATGTACAGCCAGCCAGGCGCTCAGCCAATGTAAGCGCATGCACTaGAGGCCGGTAGTCGGGGGCATGCTGGGCCTGCTGGGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: KCTASQALSQCKRMH*RPVVGGMLGLLGCL
Trigger: CAGGCAGCCCAGCAGGCCCAGCATGCCCCCGACTACCGGCCTTCAGTGCATGCGCTTACATTGGCTGAGCGCCTGGCTGGCTGTACATTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371956.8
CDS-3UTR CAA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGCACCGGGCCTCTGTCTaGGGAAGACTTACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGHRASV*GRLTGR
Trigger: CCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTG...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CAA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGACGTGGAGGCTCAGCTaGTGGGAGAAGAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGTWRLS*WEKSTS
Trigger: GCTGGTGCTCTTCTCCCACAAGCTGAGCCTCCACGT...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS GCA 90 bp GACAGTCAGTTGGGCAGCGTATCGAGTCCCAGGGAGGCCGCGTGCTaGTTGGCCCGGAGCCGCAGGTTCTCGATGCTTGTGGTTTTACTG +
Preference number: 5 (lower is better)
Translates to: DSQLGSVSSPREAAC*LARSRRFSMLVVLL
Trigger: CAGTAAAACCACAAGCATCGAGAACCTGCGGCTCCGGGCCAAGCAGCACGCGGCCTCCCTGGGACTCGATACGCTGCCCAACTGACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS GCA 90 bp CCAGACAGTCAGTTGGGCAGCGTATCGAGTCCCAGGGAGGCCGCGTaGTGCTTGGCCCGGAGCCGCAGGTTCTCGATGCTTGTGGTTTTA +
Preference number: 5 (lower is better)
Translates to: PDSQLGSVSSPREAA*CLARSRRFSMLVVL
Trigger: TAAAACCACAAGCATCGAGAACCTGCGGCTCCGGGCCAAGCAGCACGCGGCCTCCCTGGGACTCGATACGCTGCCCAACTGACTGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS CCA 90 bp CCGGACCCCCTACTTCGAAGGACGAGTAGTGCACCAGGTTGTTGGTaGCCGCCATGTGCTGGCGGAATTGCTCCTGCAGACGGAAGAGGC +
Preference number: 5 (lower is better)
Translates to: PDPLLRRTSSAPGCW*PPCAGGIAPADGRG
Trigger: GCCTCTTCCGTCTGCAGGAGCAATTCCGCCAGCACATGGCGGCCACCAACAACCTGGTGCACTACTCGTCCTTCGAAGTAGGGGGTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS CCA 90 bp GGGCCGGACCCCCTACTTCGAAGGACGAGTAGTGCACCAGGTTGTTaGTGGCCGCCATGTGCTGGCGGAATTGCTCCTGCAGACGGAAGA +
Preference number: 5 (lower is better)
Translates to: GPDPLLRRTSSAPGC*WPPCAGGIAPADGR
Trigger: TCTTCCGTCTGCAGGAGCAATTCCGCCAGCACATGGCGGCCACCAACAACCTGGTGCACTACTCGTCCTTCGAAGTAGGGGGTCCGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CAA 90 bp TCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGCCTGCTGGTGCAGGTaGTACATGGCGCTGAGTGAG +
Preference number: 5 (lower is better)
Translates to: SLFGLHGVQAGPCRGCVGACWCR*YMALSE
Trigger: CTCACTCAGCGCCATGTACAACCTGCACCAGCAGGC...ACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CAA 90 bp ATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGTGGGGTGCTGCTATATGCTTaGCACGCACCGTGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: IRPPWGPGRAMQRVCRCGVLLYA*HAPCSG
Trigger: TCCTGAGCACGGTGCGTGCAAAGCATATAGCAGCAC...CCCACACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CAA 90 bp AAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCACGTGGAGGCTCAGCTaGTGGGAGAAGAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: KKGSAVLLTSVLRGDARCTWRLS*WEKSTS
Trigger: GCTGGTGCTCTTCTCCCACAAGCTGAGCCTCCACGT...GCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp TCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTGCCGGTCACACAGCTTaGAAAGGGAGTTTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SLFGLHGVQAGPCRGCVGAGHTA*KGSLLS
Trigger: GCTCAGCAAACTCCCTTTCAAAGCTGTGTGACCGGC...ACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CAA 90 bp CACAAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGCATGTGCTGGCGGAATaGCTCCTGCAGACGGAAGAG +
Preference number: 5 (lower is better)
Translates to: HKKGSAVLLTSVLRGDARHVLAE*LLQTEE
Trigger: CTCTTCCGTCTGCAGGAGCAATTCCGCCAGCACATG...CCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp AAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCAGACCCCTGGCTGGGTaGGAAGCCAGACAGTCAGTT +
Preference number: 5 (lower is better)
Translates to: KKGSAVLLTSVLRGDARCRPLAG*EARQSV
Trigger: AACTGACTGTCTGGCTTCCAACCCAGCCAGGGGTCT...GCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp GCTCTAGAGCCCTGTGGTCAGTCCTGGCTGAACTGTGTCACCGGGCCTCTGTCTCTTCCACCTCCCAGATaGCAGCAATCCTCCCAACTC +
Preference number: 5 (lower is better)
Translates to: ALEPCGQSWLNCVTGPLSLPPPR*QQSSQL
Trigger: GAGTTGGGAGGATTGCTGCAATCTGGGAGGTGGAAG...AGACAGAGGCCCGGTGACACAGTTCAGCCAGGACTGACCACAGGGCTCTAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CAA 90 bp TCTGCCAACCTCCCACAGCGCTGCCTAAGTCTCTCCTCTGATGCCCCCATGGCTTGCCTGTCTTGGTGCTaGCCACATGTAGGTGTGGTC +
Preference number: 5 (lower is better)
Translates to: SANLPQRCLSLSSDAPMACLSWC*PHVGVV
Trigger: GACCACACCTACATGTGGCAAGCACCAAGACAGGCA...AGCCATGGGGGCATCAGAGGAGAGACTTAGGCAGCGCTGTGGGAGGTTGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp CAGGTGTGGTGGGCCTGTACCCTCTGCCCACAAGAAGGGAAGCGCGGTGCTGCTACAGTTGATGGGCTATaGGCCACAAAATCCCTCCCA +
Preference number: 5 (lower is better)
Translates to: QVWWACTLCPQEGKRGAATVDGL*ATKSLP
Trigger: TGGGAGGGATTTTGTGGCCAATAGCCCATCAACTGT...AGCAGCACCGCGCTTCCCTTCTTGTGGGCAGAGGGTACAGGCCCACCACACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp TCCCTATTCGGCCTCCATGGGGTCCAGGCAGGGCCATGCAGAGGGTGTGTAGGTTCTCCAGCTAGGGCCTaGTTGCTTCTATTGGGCATA +
Preference number: 5 (lower is better)
Translates to: SLFGLHGVQAGPCRGCVGSPARA*LLLLGI
Trigger: TATGCCCAATAGAAGCAACAAGGCCCTAGCTGGAGA...ACCTACACACCCTCTGCATGGCCCTGCCTGGACCCCATGGAGGCCGAATAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CAA 90 bp AAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCCTTCCACCTCCCAGATaGCAGCAATCCTCCCAACTC +
Preference number: 5 (lower is better)
Translates to: KKGSAVLLTSVLRGDARCLPPPR*QQSSQL
Trigger: GAGTTGGGAGGATTGCTGCAATCTGGGAGGTGGAAG...GCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS CCA 90 bp CGTCTTCGAGGGCAGAGGCTGGCTGAGCGCCGAACCACCCTCAACTaGAAAATTCGTGCAGAATCGCAATCCAGAGAGAAAAGGCGCACT +
Preference number: 5 (lower is better)
Translates to: RLRGQRLAERRTTLN*KIRAESQSREKRRT
Trigger: AGTGCGCCTTTTCTCTCTGGATTGCGATTCTGCACGAATTTTCCAGTTGAGGGTGGTTCGGCGCTCAGCCAGCCTCTGCCCTCGAAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp CATTATGCCTATGGGGAAACTGAGGCAGTGTCTACAGTGAGGCTTGTGTGTACACGGGCCTCAGGCAGGTaGGTGCACATGGCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: HYAYGETEAVSTVRLVCTRASGR*VHMASL
Trigger: GAGGCTGGCCATGTGCACCAACCTGCCTGAGGCCCG...TGTACACACAAGCCTCACTGTAGACACTGCCTCAGTTTCCCCATAGGCATAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCCGGGCCTCAGGCAGGTaGGTGCACATGGCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: HFSIPVTSWREALTSIIGRASGR*VHMASL
Trigger: GAGGCTGGCCATGTGCACCAACCTGCCTGAGGCCCG...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CAA 90 bp CTGGCTGAACTGTGTCACCGGGCCTCTGTCTTGGGAAGACTTACAGGCAGGAATCATGTGCTGGCGGAATaGCTCCTGCAGACGGAAGAG +
Preference number: 5 (lower is better)
Translates to: LAELCHRASVLGRLTGRNHVLAE*LLQTEE
Trigger: CTCTTCCGTCTGCAGGAGCAATTCCGCCAGCACATG...ATTCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CAA 90 bp CTGGCTGAACTGTGTCACCGGGCCTCTGTCTTGGGAAGACTTACAGGCAGGAATAGACCCCTGGCTGGGTaGGAAGCCAGACAGTCAGTT +
Preference number: 5 (lower is better)
Translates to: LAELCHRASVLGRLTGRNRPLAG*EARQSV
Trigger: AACTGACTGTCTGGCTTCCAACCCAGCCAGGGGTCT...ATTCCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTGACACAGTTCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CAA 90 bp GCCTTGTTGCTTCTATTGGGCATAGAAAGGAACAGCTTCCTAGAGAGGCCGCAGGCTGGTGCCCTAAACTaGAGAGCCCTCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: ALLLLLGIERNSFLERPQAGALN*RALRGQ
Trigger: CTGCCCTCGGAGGGCTCTCAAGTTTAGGGCACCAGC...CTGCGGCCTCTCTAGGAAGCTGTTCCTTTCTATGCCCAATAGAAGCAACAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp CTGGCACGACCTCTAAGCACAAATGGTCACAAAACAGCTGGTTTGGAAAGCAGTCCACCAGCCTTGGAGTaGGGGTTGGGATCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: LARPLSTNGHKTAGLESSPPALE*GLGSGP
Trigger: GGGCCCGGATCCCAACCCCAACTCCAAGGCTGGTGG...ACTGCTTTCCAAACCAGCTGTTTTGTGACCATTTGTGCTTAGAGGTCGTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp TCTGCCAACCTCCCACAGCGCTGCCTAAGTCTCTCCTCTGATGCCCCCATGGCTTTCTTTAAGCAGGGTTaGGAGTGTTCAGTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: SANLPQRCLSLSSDAPMAFFKQG*ECSVVS
Trigger: GCTCACCACTGAACACTCCAAACCCTGCTTAAAGAA...AGCCATGGGGGCATCAGAGGAGAGACTTAGGCAGCGCTGTGGGAGGTTGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp TCTGCCAACCTCCCACAGCGCTGCCTAAGTCTCTCCTCTGATGCCCCCATGGCTAAGAGACCTGAGGATTaGGAAACCCTCAAATGCCTG +
Preference number: 5 (lower is better)
Translates to: SANLPQRCLSLSSDAPMAKRPED*ETLKCL
Trigger: CAGGCATTTGAGGGTTTCCAAATCCTCAGGTCTCTT...AGCCATGGGGGCATCAGAGGAGAGACTTAGGCAGCGCTGTGGGAGGTTGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp CACAGGTGTCCTCTCCTCTTGCTCTCCAGCTGCTTTCAGTACCCAAGGCTGGTGAGCCATGACAGAACATaGCCCCTTAGGAGTTCAGGG +
Preference number: 5 (lower is better)
Translates to: HRCPLLLLSSCFQYPRLVSHDRT*PLRSSG
Trigger: CCCTGAACTCCTAAGGGGCAATGTTCTGTCATGGCT...CACCAGCCTTGGGTACTGAAAGCAGCTGGAGAGCAAGAGGAGAGGACACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp TTTGGAGTGTTCAGTGGTGAGCCACCAAGAGTTGGGGAGCATGACCAAGAATCTGCCTGCTGGTGCAGGTaGTACATGGCGCTGAGTGAG +
Preference number: 5 (lower is better)
Translates to: FGVFSGEPPRVGEHDQESACWCR*YMALSE
Trigger: CTCACTCAGCGCCATGTACAACCTGCACCAGCAGGC...AGATTCTTGGTCATGCTCCCCAACTCTTGGTGGCTCACCACTGAACACTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp GCCTTGTTGCTTCTATTGGGCATAGAAAGGAACAGCTTCCTAGAGAGGCCGCAGAAGCCAGACAGTCAGTaGGGCAGCGTATCGAGTCCC +
Preference number: 5 (lower is better)
Translates to: ALLLLLGIERNSFLERPQKPDSQ*GSVSSP
Trigger: GGGACTCGATACGCTGCCCAACTGACTGTCTGGCTT...CTGCGGCCTCTCTAGGAAGCTGTTCCTTTCTATGCCCAATAGAAGCAACAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CAA 90 bp TGCTCTCCAGCTGCTTTCAGTACCCAAGGCTGGTGCCCTAAACTTGAGAGCCCTAATCCCAGAGGACAGTaGATGGGCTATTGGCCACAA +
Preference number: 5 (lower is better)
Translates to: CSPAAFSTQGWCPKLESPNPRGQ*MGYWPQ
Trigger: TTGTGGCCAATAGCCCATCAACTGTCCTCTGGGATT...AGGGCTCTCAAGTTTAGGGCACCAGCCTTGGGTACTGAAAGCAGCTGGAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCTGTGCGGCTGCGACGTaGTTTGCGGTGCTGGGAACC +
Preference number: 5 (lower is better)
Translates to: QKEGNRRRATGSRKITKTCAAAT*FAVLGT
Trigger: GGTTCCCAGCACCGCAAACAACGTCGCAGCCGCACA...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CAA 90 bp CTGGAGGAGGTAGTGATATCTAAGGCTGTTGGATTCCAAGGCCTAGTGACAGTCGTGCTGCTATATGCTTaGCACGCACCGTGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: LEEVVISKAVGFQGLVTVVLLYA*HAPCSG
Trigger: TCCTGAGCACGGTGCGTGCAAAGCATATAGCAGCAC...GACTGTCACTAGGCCTTGGAATCCAACAGCCTTAGATATCACTACCTCCTCCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp AAGAAGGGAAGCGCGGTGCTGCTTACAAGCGTGCTCAGAGGAGATGCACGGTGCTTCTGTGTTACAAGGTaGCGAGCAAATGCAGAATGT +
Preference number: 5 (lower is better)
Translates to: KKGSAVLLTSVLRGDARCFCVTR*RANAEC
Trigger: ACATTCTGCATTTGCTCGCAACCTTGTAACACAGAA...GCACCGTGCATCTCCTCTGAGCACGCTTGTAAGCAGCACCGCGCTTCCCTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp TTTGGAGTGTTCAGTGGTGAGCCACCAAGAGTTGGGGAGCATGACCAAGAATCTGTGAGCCACCAAGAGTaGGGGAGCATGACCAAGAAT +
Preference number: 5 (lower is better)
Translates to: FGVFSGEPPRVGEHDQESVSHQE*GSMTKN
Trigger: ATTCTTGGTCATGCTCCCCAACTCTTGGTGGCTCAC...AGATTCTTGGTCATGCTCCCCAACTCTTGGTGGCTCACCACTGAACACTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp TTTGGAGTGTTCAGTGGTGAGCCACCAAGAGTTGGGGAGCATGACCAAGAATCTCCTCAAATGCCTGTCTaGGTGCTTGCCACATGTAGG +
Preference number: 5 (lower is better)
Translates to: FGVFSGEPPRVGEHDQESPQMPV*VLATCR
Trigger: CCTACATGTGGCAAGCACCAAGACAGGCATTTGAGG...AGATTCTTGGTCATGCTCCCCAACTCTTGGTGGCTCACCACTGAACACTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp CAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACAGATACATGGTGGCAGCTGAGTTaGAACGGGATCTGGTCACCC +
Preference number: 5 (lower is better)
Translates to: QRTGHNITGNETDRRTDTWWQLS*NGIWSP
Trigger: GGGTGACCAGATCCCGTTCAAACTCAGCTGCCACCA...TGTATCTGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCAAGCCAGACAGTCAGTaGGGCAGCGTATCGAGTCCC +
Preference number: 5 (lower is better)
Translates to: QKEGNRRRATGSRKITKTKPDSQ*GSVSSP
Trigger: GGGACTCGATACGCTGCCCAACTGACTGTCTGGCTT...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CAA 90 bp GCCTTGTTGCTTCTATTGGGCATAGAAAGGAACAGCTTCCTAGAGAGGCCGCAGCTCATCTCTGCTGCTTaGTTCAAACACTTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ALLLLLGIERNSFLERPQLISAA*FKHFSW
Trigger: CCAGGAGAAGTGTTTGAACAAAGCAGCAGAGATGAG...CTGCGGCCTCTCTAGGAAGCTGTTCCTTTCTATGCCCAATAGAAGCAACAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp AAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCAAACACCGGGCCTCTGTCTaGGGAAGACTTACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: KEGNRRRATGSRKITKTKHRASV*GRLTGR
Trigger: CCTGCCTGTAAGTCTTCCCAAGACAGAGGCCCGGTG...TTTGGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CAA 90 bp CAGAAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCGCCGGTCACACAGCTTaGAAAGGGAGTTTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: QKEGNRRRATGSRKITKTAGHTA*KGSLLS
Trigger: GCTCAGCAAACTCCCTTTCAAAGCTGTGTGACCGGC...GGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS-3UTR CAA 90 bp TTTGCTGAGCTGGGTTTCCTGGCTATGAACAGGAACACACTTTTCCATTCCAGTAGAGAAAAGGCGCACTaGGTGGCAGCTGAGTTTGAA +
Preference number: 5 (lower is better)
Translates to: FAELGFLAMNRNTLFHSSREKAH*VAAEFE
Trigger: TTCAAACTCAGCTGCCACCAAGTGCGCCTTTTCTCT...ACTGGAATGGAAAAGTGTGTTCCTGTTCATAGCCAGGAAACCCAGCTCAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp CACTTTTCCATTCCAGTGACTAGCTGGAGGGAAGCCCTTACTTCCATAATTGGCTGTGTACAACACCCCTaGCTCCACAGAAAGGCAATA +
Preference number: 5 (lower is better)
Translates to: HFSIPVTSWREALTSIIGCVQHP*LHRKAI
Trigger: TATTGCCTTTCTGTGGAGCAAGGGGTGTTGTACACA...GCCAATTATGGAAGTAAGGGCTTCCCTCCAGCTAGTCACTGGAATGGAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp TTTGGAGTGTTCAGTGGTGAGCCACCAAGAGTTGGGGAGCATGACCAAGAATCTAAGATCAAATCCAGATaGCCTGAACTAGAAGGGACC +
Preference number: 5 (lower is better)
Translates to: FGVFSGEPPRVGEHDQESKIKSR*PELEGT
Trigger: GGTCCCTTCTAGTTCAGGCAATCTGGATTTGATCTT...AGATTCTTGGTCATGCTCCCCAACTCTTGGTGGCTCACCACTGAACACTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp GCTATATGCTTTGCACGCACCGTGCTCAGGAGCAGAGTTCAACCTTCATTCCTGGCAGATTTGGGTCAATaGAATGGGACAAGTGTTAAC +
Preference number: 5 (lower is better)
Translates to: AICFARTVLRSRVQPSFLADLGQ*NGTSVN
Trigger: GTTAACACTTGTCCCATTCAATTGACCCAAATCTGC...CAGGAATGAAGGTTGAACTCTGCTCCTGAGCACGGTGCGTGCAAAGCATATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp AAGGAAGGGAATAGAAGGAGAGCAACGGGAAGTCGCAAAATTACTAAAACCAAACAGTACACAGTGTCTTaGCCATGGGCTGGCACGACC +
Preference number: 5 (lower is better)
Translates to: KEGNRRRATGSRKITKTKQYTVS*PWAGTT
Trigger: GGTCGTGCCAGCCCATGGCAAAGACACTGTGTACTG...TTTGGTTTTAGTAATTTTGCGACTTCCCGTTGCTCTCCTTCTATTCCCTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp CAAAGAACAGGTCACAACATCACAGGGAATGAGACTGACAGAAGGACAGATACATCTCCAGCTAGGGCCTaGTTGCTTCTATTGGGCATA +
Preference number: 5 (lower is better)
Translates to: QRTGHNITGNETDRRTDTSPARA*LLLLGI
Trigger: TATGCCCAATAGAAGCAACAAGGCCCTAGCTGGAGA...TGTATCTGTCCTTCTGTCAGTCTCATTCCCTGTGATGTTGTGACCTGTTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp TCCACTAACAGAATAAATAAATACAGTACACAGTGTCTTTGCCATGGGCTGGCAAGAGAGGCTACAGGCTaGCCCAAGGTCACACAGCTT +
Preference number: 5 (lower is better)
Translates to: STNRINKYSTQCLCHGLAREATG*PKVTQL
Trigger: AAGCTGTGTGACCTTGGGCAAGCCTGTAGCCTCTCT...TGCCAGCCCATGGCAAAGACACTGTGTACTGTATTTATTTATTCTGTTAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp TTTGCTGAGCTGGGTTTCCTGGCTATGAACAGGAACACACTTTTCCATTCCAGTCCTAGTGACAGTCACTaGTACCCAGGAACTGACAAA +
Preference number: 5 (lower is better)
Translates to: FAELGFLAMNRNTLFHSSPSDSH*YPGTDK
Trigger: TTTGTCAGTTCCTGGGTACAAGTGACTGTCACTAGG...ACTGGAATGGAAAAGTGTGTTCCTGTTCATAGCCAGGAAACCCAGCTCAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS-3UTR CAA 90 bp TTTGCTGAGCTGGGTTTCCTGGCTATGAACAGGAACACACTTTTCCATTCCAGTCTCCAAGATGATGTCTaGAAATGTACAGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: FAELGFLAMNRNTLFHSSLQDDV*KCTASQ
Trigger: CTGGCTGGCTGTACATTTCAAGACATCATCTTGGAG...ACTGGAATGGAAAAGTGTGTTCCTGTTCATAGCCAGGAAACCCAGCTCAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371956.8
CDS TCA 72 bp AGGACTGGCAGTGCAGTGAGCCCAGCGGGGCCATGTTaGCGCCCAGGTAGGGCACAGCAGCAGCCGCCGCTG +
Preference number: 6 (lower is better)
Translates to: RTGSAVSPAGPC*RPGRAQQQPPL
Trigger: CAGCGGCGGCTGCTGCTGTGCCCTACCTGGGCGTCAACATGGCCCCGCTGGGCTCACTGCACTGCCAGTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS TCA 72 bp GCCAGCCAGGCGCTCAGCCAATGTAAGCGCATGCACTaGAGGCCGGTAGTCGGGGGCATGCTGGGCCTGCTG +
Preference number: 6 (lower is better)
Translates to: ASQALSQCKRMH*RPVVGGMLGLL
Trigger: CAGCAGGCCCAGCATGCCCCCGACTACCGGCCTTCAGTGCATGCGCTTACATTGGCTGAGCGCCTGGCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371956.8
CDS GCA 72 bp TTGGGCAGCGTATCGAGTCCCAGGGAGGCCGCGTGCTaGTTGGCCCGGAGCCGCAGGTTCTCGATGCTTGTG +
Preference number: 6 (lower is better)
Translates to: LGSVSSPREAAC*LARSRRFSMLV
Trigger: CACAAGCATCGAGAACCTGCGGCTCCGGGCCAAGCAGCACGCGGCCTCCCTGGGACTCGATACGCTGCCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS GCA 72 bp CAGTTGGGCAGCGTATCGAGTCCCAGGGAGGCCGCGTaGTGCTTGGCCCGGAGCCGCAGGTTCTCGATGCTT +
Preference number: 6 (lower is better)
Translates to: QLGSVSSPREAA*CLARSRRFSML
Trigger: AAGCATCGAGAACCTGCGGCTCCGGGCCAAGCAGCACGCGGCCTCCCTGGGACTCGATACGCTGCCCAACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS TCA 72 bp GTCAGCCAGGCGCTCAGCCAATGTAAGCGCATGCACTaGAGGCCGGTAGTCGGGGGCATGCTGGGCCTGCTG +
Preference number: 6 (lower is better)
Translates to: VSQALSQCKRMH*RPVVGGMLGLL
Trigger: CAGCAGGCCCAGCATGCCCCCGACTACCGGCCTTCAGTGCATGCGCTTACATTGGCTGAGCGCCTGGCTGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS CAA 72 bp TCCAGAGAGAAAAGGCGCACTTGGTGGCAGCTGAGTTaGAACGGGATCTGGTCACCCCGGCCCGCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: SREKRRTWWQLS*NGIWSPRPAPP
Trigger: CGGCGGCGCGGGCCGGGGTGACCAGATCCCGTTCAAACTCAGCTGCCACCAAGTGCGCCTTTTCTCTCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS CCA 72 bp AAGACCCCTGGCTGGGTTGGAAGCCAGACAGTCAGTTaGGCAGCGTATCGAGTCCCAGGGAGGCCGCGTGCT +
Preference number: 6 (lower is better)
Translates to: KTPGWVGSQTVS*AAYRVPGRPRA
Trigger: AGCACGCGGCCTCCCTGGGACTCGATACGCTGCCCAACTGACTGTCTGGCTTCCAACCCAGCCAGGGGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS CAA 90 bp CAGGGCCTCGAGCTGCTGAGCCGTGAACGCTGTGCGGCTGCGACGTaGTTTGCGGTGCTGGGAACCATAACGGGCCTCCAAGATGATGTC +
Preference number: 6 (lower is better)
Translates to: QGLELLSRERCAAAT*FAVLGTITGLQDDV
Trigger: GACATCATCTTGGAGGCCCGTTATGGTTCCCAGCACCGCAAACAACGTCGCAGCCGCACAGCGTTCACGGCTCAGCAGCTCGAGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS CCA 72 bp CCTCACGGTCCGGCTGATCCTCGGGGGCTGACTCACTaGCTGACTGCTCAGACAGACTCAGGTGAAGCTCAG +
Preference number: 6 (lower is better)
Translates to: PHGPADPRGLTH*LTAQTDSGEAQ
Trigger: CTGAGCTTCACCTGAGTCTGTCTGAGCAGTCAGCCAGTGAGTCAGCCCCCGAGGATCAGCCGGACCGTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS CAA 72 bp GAGCTGCTGAGCCGTGAACGCTGTGCGGCTGCGACGTaGTTTGCGGTGCTGGGAACCATAACGGGCCTCCAA +
Preference number: 6 (lower is better)
Translates to: ELLSRERCAAAT*FAVLGTITGLQ
Trigger: TTGGAGGCCCGTTATGGTTCCCAGCACCGCAAACAACGTCGCAGCCGCACAGCGTTCACGGCTCAGCAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS GCA 72 bp CCCTCAGCCTCCTTCTGCTTCTGGAGCTGTTCCTTCTaGAGGCTACGCTGCTTCTTCCGGAACTTGGCCCGG +
Preference number: 6 (lower is better)
Translates to: PSASFCFWSCSF*RLRCFFRNLAR
Trigger: CCGGGCCAAGTTCCGGAAGAAGCAGCGTAGCCTGCAGAAGGAACAGCTCCAGAAGCAGAAGGAGGCTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS CAA 72 bp AGGGCTAGGAGGGGACACCTAAGACCCCTGGCTGGGTaGGAAGCCAGACAGTCAGTTGGGCAGCGTATCGAG +
Preference number: 6 (lower is better)
Translates to: RARRGHLRPLAG*EARQSVGQRIE
Trigger: CTCGATACGCTGCCCAACTGACTGTCTGGCTTCCAACCCAGCCAGGGGTCTTAGGTGTCCCCTCCTAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS CAA 90 bp GATAACCACAGGGCTAGGAGGGGACACCTAAGACCCCTGGCTGGGTaGGAAGCCAGACAGTCAGTTGGGCAGCGTATCGAGTCCCAGGGA +
Preference number: 6 (lower is better)
Translates to: DNHRARRGHLRPLAG*EARQSVGQRIESQG
Trigger: TCCCTGGGACTCGATACGCTGCCCAACTGACTGTCTGGCTTCCAACCCAGCCAGGGGTCTTAGGTGTCCCCTCCTAGCCCTGTGGTTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS TCA 72 bp GCTGGGCTGCCTGCTGGTGCAGGTTGTACATGGCGCTaGGTGAGTTCATGGCGTGCAGTGAGTAGCCGTTCA +
Preference number: 6 (lower is better)
Translates to: AGLPAGAGCTWR*VSSWRAVSSRS
Trigger: TGAACGGCTACTCACTGCACGCCATGAACTCACTCAGCGCCATGTACAACCTGCACCAGCAGGCAGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS CCA 72 bp TTCCTAGACCAAGGCCGCGTCTTCGAGGGCAGAGGCTaGCTGAGCGCCGAACCACCCTCAACTGGAAAATTC +
Preference number: 6 (lower is better)
Translates to: FLDQGRVFEGRG*LSAEPPSTGKF
Trigger: GAATTTTCCAGTTGAGGGTGGTTCGGCGCTCAGCCAGCCTCTGCCCTCGAAGACGCGGCCTTGGTCTAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS CCA 72 bp CTACTTCGAAGGACGAGTAGTGCACCAGGTTGTTGGTaGCCGCCATGTGCTGGCGGAATTGCTCCTGCAGAC +
Preference number: 6 (lower is better)
Translates to: LLRRTSSAPGCW*PPCAGGIAPAD
Trigger: GTCTGCAGGAGCAATTCCGCCAGCACATGGCGGCCACCAACAACCTGGTGCACTACTCGTCCTTCGAAGTAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360032.4
ENST00000371956.8
CDS TCA 72 bp GTTTGCGGTGCTGGGAACCATAACGGGCCTCCAAGATaGTGTCTTGAAATGTACAGCCAGCCAGGCGCTCAG +
Preference number: 6 (lower is better)
Translates to: VCGAGNHNGPPR*CLEMYSQPGAQ
Trigger: CTGAGCGCCTGGCTGGCTGTACATTTCAAGACATCATCTTGGAGGCCCGTTATGGTTCCCAGCACCGCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371956.8
CDS CCA 72 bp CGTGCAGAATCGCAATCCAGAGAGAAAAGGCGCACTTaGTGGCAGCTGAGTTTGAACGGGATCTGGTCACCC +
Preference number: 6 (lower is better)
Translates to: RAESQSREKRRT*WQLSLNGIWSP
Trigger: GGGTGACCAGATCCCGTTCAAACTCAGCTGCCACCAAGTGCGCCTTTTCTCTCTGGATTGCGATTCTGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS CCA 72 bp GGGCAGAGGCTGGCTGAGCGCCGAACCACCCTCAACTaGAAAATTCGTGCAGAATCGCAATCCAGAGAGAAA +
Preference number: 6 (lower is better)
Translates to: GQRLAERRTTLN*KIRAESQSREK
Trigger: TTTCTCTCTGGATTGCGATTCTGCACGAATTTTCCAGTTGAGGGTGGTTCGGCGCTCAGCCAGCCTCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS CAA 72 bp TCGTGCAGAATCGCAATCCAGAGAGAAAAGGCGCACTaGGTGGCAGCTGAGTTTGAACGGGATCTGGTCACC +
Preference number: 6 (lower is better)
Translates to: SCRIAIQREKAH*VAAEFERDLVT
Trigger: GGTGACCAGATCCCGTTCAAACTCAGCTGCCACCAAGTGCGCCTTTTCTCTCTGGATTGCGATTCTGCACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360032.4
CDS CAA 72 bp GTGCTGGGAACCATAACGGGCCTCCAAGATGATGTCTaGAAATGTACAGCCAGCCAGGCGCTCAGCCAATGT +
Preference number: 6 (lower is better)
Translates to: VLGTITGLQDDV*KCTASQALSQC
Trigger: ACATTGGCTGAGCGCCTGGCTGGCTGTACATTTCAAGACATCATCTTGGAGGCCCGTTATGGTTCCCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371956.8