RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DMAC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000105341

Ensembl transcript IDs: ENST00000221943.14, ENST00000301183.15, ENST00000417807.7, ENST00000438807.7, ENST00000586786.1, ENST00000589102.1, ENST00000589503.1, ENST00000589970.5, ENST00000590641.6, ENST00000592922.6, ENST00000594339.1, ENST00000594660.5, ENST00000595407.1, ENST00000595425.5, ENST00000597457.5, ENST00000597608.1

Found 539 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGGGCATGTGGCCCAGCCTGAGCTGAGGTCTCACTGGAGGTGGTaGAGGCAGGCGAGGCCCCGTTCGGAGATGCGGGGGCAACCGGCC +
Preference number: 1 (lower is better)
Translates to: PGHVAQPELRSHWRW*RQARPRSEMRGQPA
Trigger: GGCCGGTTGCCCCCGCATCTCCGAACGGGGCCTCGCCTGCCTCCACCACCTCCAGTGAGACCTCAGCTCAGGCTGGGCCACATGCCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594339.1
3UTR CCA 90 bp GCGGGGGCAACCGGCCAGCGAGAGCTCCTGCAACGAGTCGGCCAGTaGGTAGAGGCGGCTGAGACACCAGTCGTCCACGTGGCAGCAGCG +
Preference number: 1 (lower is better)
Translates to: AGATGQRELLQRVGQ*VEAAETPVVHVAAA
Trigger: CGCTGCTGCCACGTGGACGACTGGTGTCTCAGCCGCCTCTACCCACTGGCCGACTCGTTGCAGGAGCTCTCGCTGGCCGGTTGCCCCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594339.1
3UTR CCA 90 bp GTGCCTGGGCATGTGGCCCAGCCTGAGCTGAGGTCTCACTGGAGGTaGTGGAGGCAGGCGAGGCCCCGTTCGGAGATGCGGGGGCAACCG +
Preference number: 1 (lower is better)
Translates to: VPGHVAQPELRSHWR*WRQARPRSEMRGQP
Trigger: CGGTTGCCCCCGCATCTCCGAACGGGGCCTCGCCTGCCTCCACCACCTCCAGTGAGACCTCAGCTCAGGCTGGGCCACATGCCCAGGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594339.1
3UTR CCA 90 bp GGAGAGGTGCCTGGGCATGTGGCCCAGCCTGAGCTGAGGTCTCACTaGAGGTGGTGGAGGCAGGCGAGGCCCCGTTCGGAGATGCGGGGG +
Preference number: 1 (lower is better)
Translates to: GEVPGHVAQPELRSH*RWWRQARPRSEMRG
Trigger: CCCCCGCATCTCCGAACGGGGCCTCGCCTGCCTCCACCACCTCCAGTGAGACCTCAGCTCAGGCTGGGCCACATGCCCAGGCACCTCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594339.1
3UTR CCA 90 bp GGAGGGTGCCAAGGGCAGCTGCTGACCGCCTGGTGCTTCAGGAGCTaGGTGCTGGGGAAGCCACATGCACTGCGGCGTCCAGAGGCAGAA +
Preference number: 1 (lower is better)
Translates to: GGCQGQLLTAWCFRS*VLGKPHALRRPEAE
Trigger: TTCTGCCTCTGGACGCCGCAGTGCATGTGGCTTCCCCAGCACCCAGCTCCTGAAGCACCAGGCGGTCAGCAGCTGCCCTTGGCACCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR CCA 90 bp CCTTTAGTGAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTaGGCACAGCGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTG +
Preference number: 1 (lower is better)
Translates to: PLVSGVGRRMLHVLQ*AQRPCTGENHPCKV
Trigger: CACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTCACTAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
3UTR TCA 90 bp ACTGGAGCTCCTTCAGGCGGAGGAGGTTATCCAGGCCCTCGTAGTTaGTGTCACAGTCACCGGCATCCACAGCTTCGACAGGCACTTCAC +
Preference number: 1 (lower is better)
Translates to: TGAPSGGGGYPGPRS*CHSHRHPQLRQALH
Trigger: GTGAAGTGCCTGTCGAAGCTGTGGATGCCGGTGACTGTGACATCAACTACGAGGGCCTGGATAACCTCCTCCGCCTGAAGGAGCTCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594339.1
3UTR TCA 90 bp CCCACCCTGACGTTGAGTGAAGACAAATGGAAGCCAGAAGTGTGGTaGGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAG +
Preference number: 1 (lower is better)
Translates to: PTLTLSEDKWKPEVW*ATRHSMQPAEKPRE
Trigger: CTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCTTCACTCAACGTCAGGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR GCA 90 bp AAGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATaGAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGGCTAAAGGC +
Preference number: 1 (lower is better)
Translates to: KTNGSQKCGELPDIP*SPLRSHVSGDRAKG
Trigger: GCCTTTAGCCCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
3UTR TCA 90 bp CTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCTGACGTTGAGTaGAGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTC +
Preference number: 1 (lower is better)
Translates to: LSCDWPAPLPHPDVE*RQMEARSVVSYQTF
Trigger: GAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCTTCACTCAACGTCAGGGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR GCA 90 bp AAAATCTTTATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTaGAAATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGA +
Preference number: 1 (lower is better)
Translates to: KIFIAVQAHEAHCVN*KYATPAPAVLQQRR
Trigger: TCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTATAAAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590641.6
ENST00000594339.1
ENST00000597457.5
3UTR-3UTR TCA 90 bp CTGGAGGTGGTGGAGGCAGGCGAGGCCCCGTTCGGAGATGCGGGGGCAACCGGCCCAGGCCCTCGTAGTTaGTGTCACAGTCACCGGCAT +
Preference number: 2 (lower is better)
Translates to: LEVVEAGEAPFGDAGATGPGPRS*CHSHRH
Trigger: ATGCCGGTGACTGTGACATCAACTACGAGGGCCTGG...GCCGGTTGCCCCCGCATCTCCGAACGGGGCCTCGCCTGCCTCCACCACCTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594339.1
3UTR-3UTR CCA 90 bp AGGGCAGCTGCTGACCGCCTGGTGCTTCAGGAGCTGGGTGCTGGGGAAGCCACAGGGCCTGGGGTGCGCTaGCCTTTAGTGAGTGGAGTG +
Preference number: 2 (lower is better)
Translates to: RAAADRLVLQELGAGEATGPGVR*PLVSGV
Trigger: CACTCCACTCACTAAAGGCCAGCGCACCCCAGGCCC...TGTGGCTTCCCCAGCACCCAGCTCCTGAAGCACCAGGCGGTCAGCAGCTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR GCA 90 bp CTTCTGAGGGCTGGAGGGTGCCAAGGGCAGCTGCTGACCGCCTGGTGCTTCAGGTGGGGCGAAGGATGCTaGATGTCCTGCAGTGGGCAC +
Preference number: 2 (lower is better)
Translates to: LLRAGGCQGQLLTAWCFRWGEGC*MSCSGH
Trigger: GTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCA...CCTGAAGCACCAGGCGGTCAGCAGCTGCCCTTGGCACCCTCCAGCCCTCAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR TCA 90 bp GAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGAGTCTCCTGACAAGGTaGGTGTGGCTCTCTGCGGCT +
Preference number: 2 (lower is better)
Translates to: EWSGAKDAACPAVGTAALSLLTR*VWLSAA
Trigger: AGCCGCAGAGAGCCACACTCACCTTGTCAGGAGACT...CAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR CCA 90 bp CCGCCTGGTGCTTCAGGAGCTGGGTGCTGGGGAAGCCACATGCACTGCGGCGTCCAATACTATGGGGCCTaGGGTGCGCTGGCCTTTAGT +
Preference number: 2 (lower is better)
Translates to: PPGASGAGCWGSHMHCGVQYYGA*GALAFS
Trigger: ACTAAAGGCCAGCGCACCCCAGGCCCCATAGTATTG...GACGCCGCAGTGCATGTGGCTTCCCCAGCACCCAGCTCCTGAAGCACCAGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR CCA 90 bp GAGGTGCCTCAGTGGAGGCGCTGTGTCTCCTACGCAACTTCTGAGGGCTGGAGGCAGCTGCTGACCGCCTaGTGCTTCAGGAGCTGGGTG +
Preference number: 2 (lower is better)
Translates to: EVPQWRRCVSYATSEGWRQLLTA*CFRSWV
Trigger: CACCCAGCTCCTGAAGCACCAGGCGGTCAGCAGCTG...CCTCCAGCCCTCAGAAGTTGCGTAGGAGACACAGCGCCTCCACTGAGGCACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR CCA 90 bp TACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCTGAGGCAGGGACAGGGCTaGCTGTGTCCCGAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: YWELTLSPVIGQHHSPTLRQGQG*LCPEAA
Trigger: AGCAGCCTCGGGACACAGCCAGCCCTGTCCCTGCCT...CAGGGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
3UTR-3UTR TCA 90 bp GAGGTGCCTCAGTGGAGGCGCTGTGTCTCCTACGCAACTTCTGAGGGCTGGAGGTCACGCTCTCTCCTGTaGTTGGCCAGCACCACTCCC +
Preference number: 2 (lower is better)
Translates to: EVPQWRRCVSYATSEGWRSRSLL*LASTTP
Trigger: GGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGA...CCTCCAGCCCTCAGAAGTTGCGTAGGAGACACAGCGCCTCCACTGAGGCACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR TCA 90 bp CCCAGAGAGGTGCCTCAGTGGAGGCGCTGTGTCTCCTACGCAACTTCTGAGGGCTCACGCTCTCTCCTGTaGTTGGCCAGCACCACTCCC +
Preference number: 2 (lower is better)
Translates to: PREVPQWRRCVSYATSEGSRSLL*LASTTP
Trigger: GGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGA...GCCCTCAGAAGTTGCGTAGGAGACACAGCGCCTCCACTGAGGCACCTCTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR CCA 90 bp GCCTGGTGCTTCAGGAGCTGGGTGCTGGGGAAGCCACATGCACTGCGGCGTCCACAATACTATGGGGCCTaGGGTGCGCTGGCCTTTAGT +
Preference number: 2 (lower is better)
Translates to: AWCFRSWVLGKPHALRRPQYYGA*GALAFS
Trigger: ACTAAAGGCCAGCGCACCCCAGGCCCCATAGTATTG...TGGACGCCGCAGTGCATGTGGCTTCCCCAGCACCCAGCTCCTGAAGCACCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR TCA 90 bp CCGCCTGGTGCTTCAGGAGCTGGGTGCTGGGGAAGCCACATGCACTGCGGCGTCCACCCTGACGTTGAGTaGAGACAAATGGAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: PPGASGAGCWGSHMHCGVHPDVE*RQMEAR
Trigger: TCTGGCTTCCATTTGTCTTCACTCAACGTCAGGGTG...GACGCCGCAGTGCATGTGGCTTCCCCAGCACCCAGCTCCTGAAGCACCAGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR TCA 90 bp GTCTCCTACGCAACTTCTGAGGGCTGGAGGGTGCCAAGGGCAGCTGCTGACCGCCACCCTGACGTTGAGTaGAGACAAATGGAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: VSYATSEGWRVPRAAADRHPDVE*RQMEAR
Trigger: TCTGGCTTCCATTTGTCTTCACTCAACGTCAGGGTG...GCGGTCAGCAGCTGCCCTTGGCACCCTCCAGCCCTCAGAAGTTGCGTAGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR GCA 90 bp CCCAGAGAGGTGCCTCAGTGGAGGCGCTGTGTCTCCTACGCAACTTCTGAGGGCGTCAGTCAGGGTCCCTaGAAGAAATGGCAGTGCACT +
Preference number: 2 (lower is better)
Translates to: PREVPQWRRCVSYATSEGVSQGP*KKWQCT
Trigger: AGTGCACTGCCATTTCTTGCAGGGACCCTGACTGAC...GCCCTCAGAAGTTGCGTAGGAGACACAGCGCCTCCACTGAGGCACCTCTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR TCA 90 bp GGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCAGTCAGGGTCTTACCTCCCCAGGCCTaGACAGGGGCATGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: GENHPCKVSVVAPVSVRVLPPQA*TGAWKG
Trigger: CCCTTTCCATGCCCCTGTTCAGGCCTGGGGAGGTAA...GACCCTGACTGACACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR TCA 90 bp GGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCAGTCAGGGTCCGGCTACTAACAGCCTaGGCCTTTACCTCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: GENHPCKVSVVAPVSVRVRLLTA*AFTSPG
Trigger: GCCTGGGGAGGTAAAGGCTCAGGCTGTTAGTAGCCG...GACCCTGACTGACACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR GCA 90 bp GTCAATAAATCCATAACCAGCAATACTATGGGGCCTGGGGTGCGCTGGCCTTTATGGGCACAGCGGCCCTaGACGGGGGAGAACCATCCC +
Preference number: 2 (lower is better)
Translates to: VNKSITSNTMGPGVRWPLWAQRP*TGENHP
Trigger: GGGATGGTTCTCCCCCGTGCAGGGCCGCTGTGCCCA...TAAAGGCCAGCGCACCCCAGGCCCCATAGTATTGCTGGTTATGGATTTATTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR TCA 90 bp TTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCCTCAGTGGAGGCGCTGTGAAGCCAGAAGTGTGGTaGGCTACCAGACATTCCATG +
Preference number: 2 (lower is better)
Translates to: LGCWGTLFPERCLSGGAVKPEVW*ATRHSM
Trigger: CATGGAATGTCTGGTAGCTCACCACACTTCTGGCTT...CACAGCGCCTCCACTGAGGCACCTCTCTGGGAATAACGTTCCCCAGCACCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR TCA 90 bp ACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCCTCAGTCACGCTCTCTCCTGTaGTTGGCCAGCACCACTCCC +
Preference number: 2 (lower is better)
Translates to: TGNPFGVLGNVIPREVPQSRSLL*LASTTP
Trigger: GGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGA...CTGAGGCACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR TCA 90 bp GGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCACGCTCTCTCCTGTaGTTGGCCAGCACCACTCCC +
Preference number: 2 (lower is better)
Translates to: GAVTFSQGQPGINTGNSRSRSLL*LASTTP
Trigger: GGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGA...GCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR-3UTR TCA 90 bp TTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCCTCAGTGGAGGCGCTGTGTTGAGAAGAGTCTCCTaGCAAGGTGAGTGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: LGCWGTLFPERCLSGGAVLRRVS*QGECGS
Trigger: AGAGCCACACTCACCTTGTCAGGAGACTCTTCTCAA...CACAGCGCCTCCACTGAGGCACCTCTCTGGGAATAACGTTCCCCAGCACCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR CCA 90 bp CCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATGCTCTCTCCTGTGATTaGCCAGCACCACTCCCCCAC +
Preference number: 2 (lower is better)
Translates to: PDRVTGAVTFSQGQPGINALSCD*PAPLPH
Trigger: GTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGC...ATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR-3UTR CCA 90 bp GTGTGTGTGTGTGCGTGCGTGCATGCGTGCATGTGTGTGTGTATAGGGAGGTACTGCATCTGGGTTAGGTaGGAGAGGTGCCTGGGCATG +
Preference number: 2 (lower is better)
Translates to: VCVCACVHACMCVCIGRYCIWVR*ERCLGM
Trigger: CATGCCCAGGCACCTCTCCCACCTAACCCAGATGCA...GTACCTCCCTATACACACACACATGCACGCATGCACGCACGCACACACACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
3UTR-3UTR TCA 90 bp ACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCCTCAGAGTCTCCTGACAAGGTaGGTGTGGCTCTCTGCGGCT +
Preference number: 2 (lower is better)
Translates to: TGNPFGVLGNVIPREVPQSLLTR*VWLSAA
Trigger: AGCCGCAGAGAGCCACACTCACCTTGTCAGGAGACT...CTGAGGCACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR TCA 90 bp GAGGTGCCTCAGTGGAGGCGCTGTGTCTCCTACGCAACTTCTGAGGGCTGGAGGCACATAAGGACAGTTTaGGAAGAGTCTCCTGACAAG +
Preference number: 2 (lower is better)
Translates to: EVPQWRRCVSYATSEGWRHIRTV*EESPDK
Trigger: CTTGTCAGGAGACTCTTCTCAAACTGTCCTTATGTG...CCTCCAGCCCTCAGAAGTTGCGTAGGAGACACAGCGCCTCCACTGAGGCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR GCA 90 bp TTGACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCCTGCTTCAGGAGCTGGGTaGTGGGGAAGCCACATGCAC +
Preference number: 2 (lower is better)
Translates to: LTGNPFGVLGNVIPREVPASGAG*WGSHMH
Trigger: GTGCATGTGGCTTCCCCAGCACCCAGCTCCTGAAGC...AGGCACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR CCA 90 bp TTGACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCCTGCTCTCTCCTGTGATTaGCCAGCACCACTCCCCCAC +
Preference number: 2 (lower is better)
Translates to: LTGNPFGVLGNVIPREVPALSCD*PAPLPH
Trigger: GTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGC...AGGCACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR TCA 90 bp GAATTGACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGTTACCTCCCCAGGCCTaGACAGGGGCATGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: ELTGNPFGVLGNVIPREVLPPQA*TGAWKG
Trigger: CCCTTTCCATGCCCCTGTTCAGGCCTGGGGAGGTAA...CACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGTCAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR TCA 90 bp ATTGACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCCAGTCTCCTGACAAGGTaGGTGTGGCTCTCTGCGGCT +
Preference number: 2 (lower is better)
Translates to: IDWKSIWGAGERYSQRGASLLTR*VWLSAA
Trigger: AGCCGCAGAGAGCCACACTCACCTTGTCAGGAGACT...GGCACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR GCA 90 bp GGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCCTACCAGACATTCCATaGAGCCCGCTGAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: GAVTFSQGQPGINTGNSRLPDIP*SPLRSH
Trigger: GTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAG...GCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR-3UTR TCA 90 bp GTCAATAAATCCATAACCAGCAATACTATGGGGCCTGGGGTGCGCTGGCCTTTAAGTCTCCTGACAAGGTaGGTGTGGCTCTCTGCGGCT +
Preference number: 2 (lower is better)
Translates to: VNKSITSNTMGPGVRWPLSLLTR*VWLSAA
Trigger: AGCCGCAGAGAGCCACACTCACCTTGTCAGGAGACT...TAAAGGCCAGCGCACCCCAGGCCCCATAGTATTGCTGGTTATGGATTTATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR CCA 90 bp AGGAGGCGCCTTTCCTCCTATAATGCCTGTTTGGTGCCCTCTACTGACAAAGCTCTGGCCTTTAGTGAGTaGAGTGGGGCGAAGGATGCT +
Preference number: 2 (lower is better)
Translates to: RRRLSSYNACLVPSTDKALAFSE*SGAKDA
Trigger: AGCATCCTTCGCCCCACTCCACTCACTAAAGGCCAG...AGCTTTGTCAGTAGAGGGCACCAAACAGGCATTATAGGAGGAAAGGCGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR CCA 90 bp AGGAGGCGCCTTTCCTCCTATAATGCCTGTTTGGTGCCCTCTACTGACAAAGCTCAATACTATGGGGCCTaGGGTGCGCTGGCCTTTAGT +
Preference number: 2 (lower is better)
Translates to: RRRLSSYNACLVPSTDKAQYYGA*GALAFS
Trigger: ACTAAAGGCCAGCGCACCCCAGGCCCCATAGTATTG...AGCTTTGTCAGTAGAGGGCACCAAACAGGCATTATAGGAGGAAAGGCGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR TCA 90 bp CCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATCACCCTGACGTTGAGTaGAGACAAATGGAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: PDRVTGAVTFSQGQPGINHPDVE*RQMEAR
Trigger: TCTGGCTTCCATTTGTCTTCACTCAACGTCAGGGTG...ATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR-3UTR GCA 90 bp AGGAGGCGCCTTTCCTCCTATAATGCCTGTTTGGTGCCCTCTACTGACAAAGCTGTCAGTCAGGGTCCCTaGAAGAAATGGCAGTGCACT +
Preference number: 2 (lower is better)
Translates to: RRRLSSYNACLVPSTDKAVSQGP*KKWQCT
Trigger: AGTGCACTGCCATTTCTTGCAGGGACCCTGACTGAC...AGCTTTGTCAGTAGAGGGCACCAAACAGGCATTATAGGAGGAAAGGCGCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR CCA 90 bp GTCAATAAATCCATAACCAGCAATACTATGGGGCCTGGGGTGCGCTGGCCTTTACTGGCCTTTAGTGAGTaGAGTGGGGCGAAGGATGCT +
Preference number: 2 (lower is better)
Translates to: VNKSITSNTMGPGVRWPLLAFSE*SGAKDA
Trigger: AGCATCCTTCGCCCCACTCCACTCACTAAAGGCCAG...TAAAGGCCAGCGCACCCCAGGCCCCATAGTATTGCTGGTTATGGATTTATTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR CCA 90 bp TTGCAAATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATCACACTGCATCTGGGTTAGGTaGGAGAGGTGCCTGGGCATG +
Preference number: 2 (lower is better)
Translates to: LQICNSSSCCSATASISHCIWVR*ERCLGM
Trigger: CATGCCCAGGCACCTCTCCCACCTAACCCAGATGCA...GTGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
3UTR-3UTR TCA 90 bp AGGAATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCAAGCCAGAAGTGTGGTaGGCTACCAGACATTCCATG +
Preference number: 2 (lower is better)
Translates to: RNKYWELTLSPVIGQHHSKPEVW*ATRHSM
Trigger: CATGGAATGTCTGGTAGCTCACCACACTTCTGGCTT...GGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR-3UTR TCA 90 bp GACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTAAGCCAGAAGTGTGGTaGGCTACCAGACATTCCATG +
Preference number: 2 (lower is better)
Translates to: DRVTGAVTFSQGQPGINTKPEVW*ATRHSM
Trigger: CATGGAATGTCTGGTAGCTCACCACACTTCTGGCTT...AGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR-3UTR TCA 90 bp GTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTCTCCACCCTGACGTTGAGTaGAGACAAATGGAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: VTFSQGQPGINTGNSRSLHPDVE*RQMEAR
Trigger: TCTGGCTTCCATTTGTCTTCACTCAACGTCAGGGTG...GAGAGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR-3UTR GCA 90 bp TCAGGGTCCCTGCAAGAAATGGCAGTGCACTCACATAAGGACAGTTTGAGAAGACTACCAGACATTCCATaGAGCCCGCTGAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: SGSLQEMAVHSHKDSLRRLPDIP*SPLRSH
Trigger: GTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAG...TCTTCTCAAACTGTCCTTATGTGAGTGCACTGCCATTTCTTGCAGGGACCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR-3UTR GCA 90 bp GCCTTTCCTCCTATAATGCCTGTTTGGTGCCCTCTACTGACAAAGCTTATCCCCGTCAGTCAGGGTCCCTaGAAGAAATGGCAGTGCACT +
Preference number: 2 (lower is better)
Translates to: AFPPIMPVWCPLLTKLIPVSQGP*KKWQCT
Trigger: AGTGCACTGCCATTTCTTGCAGGGACCCTGACTGAC...GGGGATAAGCTTTGTCAGTAGAGGGCACCAAACAGGCATTATAGGAGGAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR CCA 90 bp TTGCAAATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATCACACTTCCTCTCCTGCATCTaGGTTAGGTGGGAGAGGTGC +
Preference number: 2 (lower is better)
Translates to: LQICNSSSCCSATASISHFLSCI*VRWERC
Trigger: GCACCTCTCCCACCTAACCCAGATGCAGGAGAGGAA...GTGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
3UTR-3UTR TCA 90 bp GTGAAGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCAAGCCAGAAGTGTGGTaGGCTACCAGACATTCCATG +
Preference number: 2 (lower is better)
Translates to: VKTNGSQKCGELPDIPCSKPEVW*ATRHSM
Trigger: CATGGAATGTCTGGTAGCTCACCACACTTCTGGCTT...GCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR-3UTR TCA 90 bp ATTGACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCCTTTGGTGCCCTCTACTaGCAAAGCTTATCCCCTTTC +
Preference number: 2 (lower is better)
Translates to: IDWKSIWGAGERYSQRGAFGALY*QSLSPF
Trigger: GAAAGGGGATAAGCTTTGTCAGTAGAGGGCACCAAA...GGCACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR GCA 90 bp TCCTATAATGCCTGTTTGGTGCCCTCTACTGACAAAGCTTATCCCCTTTCAAAATGGGGCGAAGGATGCTaGATGTCCTGCAGTGGGCAC +
Preference number: 2 (lower is better)
Translates to: SYNACLVPSTDKAYPLSKWGEGC*MSCSGH
Trigger: GTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCA...TTTTGAAAGGGGATAAGCTTTGTCAGTAGAGGGCACCAAACAGGCATTATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR TCA 90 bp TCCCTGCAAGAAATGGCAGTGCACTCACATAAGGACAGTTTGAGAAGAGTCTCCAAGCCAGAAGTGTGGTaGGCTACCAGACATTCCATG +
Preference number: 2 (lower is better)
Translates to: SLQEMAVHSHKDSLRRVSKPEVW*ATRHSM
Trigger: CATGGAATGTCTGGTAGCTCACCACACTTCTGGCTT...GGAGACTCTTCTCAAACTGTCCTTATGTGAGTGCACTGCCATTTCTTGCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR-3UTR TCA 90 bp TCCCTGCAAGAAATGGCAGTGCACTCACATAAGGACAGTTTGAGAAGAGTCTCCTTGAGAAGAGTCTCCTaGCAAGGTGAGTGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: SLQEMAVHSHKDSLRRVSLRRVS*QGECGS
Trigger: AGAGCCACACTCACCTTGTCAGGAGACTCTTCTCAA...GGAGACTCTTCTCAAACTGTCCTTATGTGAGTGCACTGCCATTTCTTGCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR-3UTR TCA 90 bp AAATCCATAACCAGCAATACTATGGGGCCTGGGGTGCGCTGGCCTTTAGTGAGTCACATAAGGACAGTTTaGGAAGAGTCTCCTGACAAG +
Preference number: 2 (lower is better)
Translates to: KSITSNTMGPGVRWPLVSHIRTV*EESPDK
Trigger: CTTGTCAGGAGACTCTTCTCAAACTGTCCTTATGTG...ACTCACTAAAGGCCAGCGCACCCCAGGCCCCATAGTATTGCTGGTTATGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR TCA 90 bp GAATTGACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGTTTGGTGCCCTCTACTaGCAAAGCTTATCCCCTTTC +
Preference number: 2 (lower is better)
Translates to: ELTGNPFGVLGNVIPREVFGALY*QSLSPF
Trigger: GAAAGGGGATAAGCTTTGTCAGTAGAGGGCACCAAA...CACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGTCAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR TCA 90 bp TCCCTGCAAGAAATGGCAGTGCACTCACATAAGGACAGTTTGAGAAGAGTCTCCCACATAAGGACAGTTTaGGAAGAGTCTCCTGACAAG +
Preference number: 2 (lower is better)
Translates to: SLQEMAVHSHKDSLRRVSHIRTV*EESPDK
Trigger: CTTGTCAGGAGACTCTTCTCAAACTGTCCTTATGTG...GGAGACTCTTCTCAAACTGTCCTTATGTGAGTGCACTGCCATTTCTTGCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR-3UTR TCA 90 bp TGTGTTAATTGCAAATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGAAATACTCTAGGTTTGTaGTGGATGCAGGGGGATATG +
Preference number: 2 (lower is better)
Translates to: CVNCKYATPAPAVLQQRRNTLGL*WMQGDM
Trigger: CATATCCCCCTGCATCCATCACAAACCTAGAGTATT...TCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCAATTAACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
3UTR-3UTR TCA 90 bp ACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATCACACAGTTTTGACTAAATCCAGAGACTCACTGTaGCTGCTCATCTACCATAAA +
Preference number: 2 (lower is better)
Translates to: TPAPAVLQQRRYHTVLTKSRDSL*LLIYHK
Trigger: TTTATGGTAGATGAGCAGTCACAGTGAGTCTCTGGA...TTTAGTCAAAACTGTGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
3UTR CCA 72 bp CCTGGGCATGTGGCCCAGCCTGAGCTGAGGTCTCACTaGAGGTGGTGGAGGCAGGCGAGGCCCCGTTCGGAG +
Preference number: 3 (lower is better)
Translates to: PGHVAQPELRSH*RWWRQARPRSE
Trigger: CTCCGAACGGGGCCTCGCCTGCCTCCACCACCTCCAGTGAGACCTCAGCTCAGGCTGGGCCACATGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594339.1
3UTR CCA 72 bp CATGTGGCCCAGCCTGAGCTGAGGTCTCACTGGAGGTaGTGGAGGCAGGCGAGGCCCCGTTCGGAGATGCGG +
Preference number: 3 (lower is better)
Translates to: HVAQPELRSHWR*WRQARPRSEMR
Trigger: CCGCATCTCCGAACGGGGCCTCGCCTGCCTCCACCACCTCCAGTGAGACCTCAGCTCAGGCTGGGCCACATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594339.1
3UTR TCA 72 bp GCTCCTGCAACGAGTCGGCCAGTGGGTAGAGGCGGCTaGGACACCAGTCGTCCACGTGGCAGCAGCGCTGCA +
Preference number: 3 (lower is better)
Translates to: APATSRPVGRGG*DTSRPRGSSAA
Trigger: TGCAGCGCTGCTGCCACGTGGACGACTGGTGTCTCAGCCGCCTCTACCCACTGGCCGACTCGTTGCAGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594339.1
3UTR GCA 72 bp GCTGGAGGGTGCCAAGGGCAGCTGCTGACCGCCTGGTaGTTCAGGAGCTGGGTGCTGGGGAAGCCACATGCA +
Preference number: 3 (lower is better)
Translates to: AGGCQGQLLTAW*FRSWVLGKPHA
Trigger: TGCATGTGGCTTCCCCAGCACCCAGCTCCTGAAGCACCAGGCGGTCAGCAGCTGCCCTTGGCACCCTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR GCA 72 bp CGGCTGAGACACCAGTCGTCCACGTGGCAGCAGCGCTaGAGCGACAAGGACTGGAGCTCCTTCAGGCGGAGG +
Preference number: 3 (lower is better)
Translates to: RLRHQSSTWQQR*SDKDWSSFRRR
Trigger: CCTCCGCCTGAAGGAGCTCCAGTCCTTGTCGCTGCAGCGCTGCTGCCACGTGGACGACTGGTGTCTCAGCCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594339.1
3UTR CCA 72 bp AGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTaGGCACAGCGGCCCTGCACGGGGGAGAACCATCCC +
Preference number: 3 (lower is better)
Translates to: SGVGRRMLHVLQ*AQRPCTGENHP
Trigger: GGGATGGTTCTCCCCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
3UTR CCA 72 bp CAAGGGCAGCTGCTGACCGCCTGGTGCTTCAGGAGCTaGGTGCTGGGGAAGCCACATGCACTGCGGCGTCCA +
Preference number: 3 (lower is better)
Translates to: QGQLLTAWCFRS*VLGKPHALRRP
Trigger: TGGACGCCGCAGTGCATGTGGCTTCCCCAGCACCCAGCTCCTGAAGCACCAGGCGGTCAGCAGCTGCCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR CCA 72 bp ACCGGCCAGCGAGAGCTCCTGCAACGAGTCGGCCAGTaGGTAGAGGCGGCTGAGACACCAGTCGTCCACGTG +
Preference number: 3 (lower is better)
Translates to: TGQRELLQRVGQ*VEAAETPVVHV
Trigger: CACGTGGACGACTGGTGTCTCAGCCGCCTCTACCCACTGGCCGACTCGTTGCAGGAGCTCTCGCTGGCCGGT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594339.1
3UTR CCA 72 bp TGGAGGCGCTGTGTCTCCTACGCAACTTCTGAGGGCTaGAGGGTGCCAAGGGCAGCTGCTGACCGCCTGGTG +
Preference number: 3 (lower is better)
Translates to: WRRCVSYATSEG*RVPRAAADRLV
Trigger: CACCAGGCGGTCAGCAGCTGCCCTTGGCACCCTCCAGCCCTCAGAAGTTGCGTAGGAGACACAGCGCCTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR GCA 72 bp GCTGTGTCTCCTACGCAACTTCTGAGGGCTGGAGGGTaGCAAGGGCAGCTGCTGACCGCCTGGTGCTTCAGG +
Preference number: 3 (lower is better)
Translates to: AVSPTQLLRAGG*QGQLLTAWCFR
Trigger: CCTGAAGCACCAGGCGGTCAGCAGCTGCCCTTGGCACCCTCCAGCCCTCAGAAGTTGCGTAGGAGACACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR GCA 72 bp GGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATaGAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGG +
Preference number: 3 (lower is better)
Translates to: GSQKCGELPDIP*SPLRSHVSGDR
Trigger: CCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR GCA 72 bp GCTTCAGGAGCTGGGTGCTGGGGAAGCCACATGCACTaGGGCGTCCAGAGGCAGAAGCACAACCAACAAGAA +
Preference number: 3 (lower is better)
Translates to: ASGAGCWGSHMH*GVQRQKHNQQE
Trigger: TTCTTGTTGGTTGTGCTTCTGCCTCTGGACGCCGCAGTGCATGTGGCTTCCCCAGCACCCAGCTCCTGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR CAA 90 bp TGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCTGACGTCCCCCACCCTGACGTaGAGTGAAGACAAATGGAAG +
Preference number: 3 (lower is better)
Translates to: WELTLSPVIGQHHSPTLTSPTLT*SEDKWK
Trigger: CTTCCATTTGTCTTCACTCAACGTCAGGGTGGGGGA...CGTCAGGGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR TCA 72 bp CCTTCAGGCGGAGGAGGTTATCCAGGCCCTCGTAGTTaGTGTCACAGTCACCGGCATCCACAGCTTCGACAG +
Preference number: 3 (lower is better)
Translates to: PSGGGGYPGPRS*CHSHRHPQLRQ
Trigger: CTGTCGAAGCTGTGGATGCCGGTGACTGTGACATCAACTACGAGGGCCTGGATAACCTCCTCCGCCTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594339.1
3UTR GCA 72 bp TGTGCGTGCGTGTGTGTGTGTGCGTGCGTGCATGCGTaGATGTGTGTGTGTATAGGGAGGTACTGGCCCCAA +
Preference number: 3 (lower is better)
Translates to: CACVCVCACVHA*MCVCIGRYWPQ
Trigger: TTGGGGCCAGTACCTCCCTATACACACACACATGCACGCATGCACGCACGCACACACACACACGCACGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
3UTR GCA 72 bp TGTGTGTGCGTGCGTGTGTGTGTGTGCGTGCGTGCATaGGTGCATGTGTGTGTGTATAGGGAGGTACTGGCC +
Preference number: 3 (lower is better)
Translates to: CVCVRVCVCVRA*VHVCVYREVLA
Trigger: GGCCAGTACCTCCCTATACACACACACATGCACGCATGCACGCACGCACACACACACACGCACGCACACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
3UTR-3UTR CAA 90 bp TGGAAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGTCCCCCACCCTGACGTaGAGTGAAGACAAATGGAAG +
Preference number: 3 (lower is better)
Translates to: WKGLPDRVTGAVTFSQGQSPTLT*SEDKWK
Trigger: CTTCCATTTGTCTTCACTCAACGTCAGGGTGGGGGA...CTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR-3UTR CAA 90 bp TGGCTCTCTGCGGCTACTAACAGCCTGAGCCTTTACCTCCCCAGGCCTGAACAGTCCCCCACCCTGACGTaGAGTGAAGACAAATGGAAG +
Preference number: 3 (lower is better)
Translates to: WLSAATNSLSLYLPRPEQSPTLT*SEDKWK
Trigger: CTTCCATTTGTCTTCACTCAACGTCAGGGTGGGGGA...CTGTTCAGGCCTGGGGAGGTAAAGGCTCAGGCTGTTAGTAGCCGCAGAGAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR GCA 72 bp CATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTaGCTCAGTGGAGGCGCTGTGTCTCCTACGCAACTT +
Preference number: 3 (lower is better)
Translates to: HLGCWGTLFPER*LSGGAVSPTQL
Trigger: AAGTTGCGTAGGAGACACAGCGCCTCCACTGAGGCACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
3UTR-3UTR CAA 90 bp GTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTCTCTCCCCCACCCTGACGTaGAGTGAAGACAAATGGAAG +
Preference number: 3 (lower is better)
Translates to: VTFSQGQPGINTGNSRSLSPTLT*SEDKWK
Trigger: CTTCCATTTGTCTTCACTCAACGTCAGGGTGGGGGA...GAGAGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR TCA 72 bp ACGTTGAGTGAAGACAAATGGAAGCCAGAAGTGTGGTaGGCTACCAGACATTCCATGCAGCCCGCTGAGAAG +
Preference number: 3 (lower is better)
Translates to: TLSEDKWKPEVW*ATRHSMQPAEK
Trigger: CTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCTTCACTCAACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR GCA 72 bp AGTGTCAGTAGTAGCCCCTGTGTCAGTCAGGGTCCCTaGAAGAAATGGCAGTGCACTCACATAAGGACAGTT +
Preference number: 3 (lower is better)
Translates to: SVSSSPCVSQGP*KKWQCTHIRTV
Trigger: AACTGTCCTTATGTGAGTGCACTGCCATTTCTTGCAGGGACCCTGACTGACACAGGGGCTACTACTGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
3UTR TCA 72 bp TGCAAGAAATGGCAGTGCACTCACATAAGGACAGTTTaGGAAGAGTCTCCTGACAAGGTGAGTGTGGCTCTC +
Preference number: 3 (lower is better)
Translates to: CKKWQCTHIRTV*EESPDKVSVAL
Trigger: GAGAGCCACACTCACCTTGTCAGGAGACTCTTCTCAAACTGTCCTTATGTGAGTGCACTGCCATTTCTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
3UTR GCA 72 bp ATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTaGAAATATGCAACTCCAGCTCCTGCTGTTCTGCAA +
Preference number: 3 (lower is better)
Translates to: IAVQAHEAHCVN*KYATPAPAVLQ
Trigger: TTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590641.6
ENST00000594339.1
ENST00000597457.5
CDS-3UTR GCA 90 bp GGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGGGAGGCCAGCGAGAGCTCCTaGAACGAGTCGGCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: GRRMLHVLQWAQRPCTGEASESS*NESASG
Trigger: CCCACTGGCCGACTCGTTGCAGGAGCTCTCGCTGGC...CTCCCCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000592922.6
ENST00000594660.5
CDS-3UTR CCA 90 bp CCCCGTTCGGAGATGCGGGGGCAACCGGCCAGCGAGAGCTCCTGCAACGAGTCGTCTCACTGGAGGTGGTaGAGGCAGGCGAGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: PRSEMRGQPASESSCNESSHWRW*RQARPR
Trigger: ACGGGGCCTCGCCTGCCTCCACCACCTCCAGTGAGA...CGACTCGTTGCAGGAGCTCTCGCTGGCCGGTTGCCCCCGCATCTCCGAACGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594339.1
CDS-3UTR TCA 90 bp GTGAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCCTGCTCCTCCGGCCCTaGCTTCAGGCCCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: VSGVGRRMLHVLQWAQRPLLLRP*LQALSP
Trigger: TGGGCTGAGGGCCTGAAGTCAGGGCCGGAGGAGCAG...GGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp TGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGCCCTCTGGGGCCACTaGCGCACCCAGGCGATGGAT +
Preference number: 4 (lower is better)
Translates to: WSGAKDAACPAVGTAALHALWGH*RTQAMD
Trigger: ATCCATCGCCTGGGTGCGGCAGTGGCCCCAGAGGGC...GTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp GTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGGCTGCTGACCGCCTGGTaGTTCAGGAGCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VGRRMLHVLQWAQRPCTGLLTAW*FRSWVL
Trigger: CAGCACCCAGCTCCTGAAGCACCAGGCGGTCAGCAG...CCCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp AGGGCAGCTGCTGACCGCCTGGTGCTTCAGGAGCTGGGTGCTGGGGAAGCCACACGGAGGTTCTGGAGGTaGTGGAGGCAGGCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RAAADRLVLQELGAGEATRRFWR*WRQARP
Trigger: GGGCCTCGCCTGCCTCCACCACCTCCAGAACCTCCG...TGTGGCTTCCCCAGCACCCAGCTCCTGAAGCACCAGGCGGTCAGCAGCTGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221943.14
ENST00000592922.6
CDS-3UTR CCA 90 bp GTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGAGGTTCTGGAGGTaGTGGAGGCAGGCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: VEWGEGCCMSCSGHSGPARRFWR*WRQARP
Trigger: GGGCCTCGCCTGCCTCCACCACCTCCAGAACCTCCG...TGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000592922.6
ENST00000594660.5
CDS-3UTR GCA 90 bp AGTGAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCGCCCTCTGGGGCCACTaGCGCACCCAGGCGATGGAT +
Preference number: 4 (lower is better)
Translates to: SEWSGAKDAACPAVGTAAALWGH*RTQAMD
Trigger: ATCCATCGCCTGGGTGCGGCAGTGGCCCCAGAGGGC...GGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp GAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGGCTGTGTCCCGAGGCTaGTCCTCCGGCCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: EWSGAKDAACPAVGTAALAVSRG*SSGPDF
Trigger: GAAGTCAGGGCCGGAGGAGCAGCCTCGGGACACAGC...CAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp GGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGGGAGTGGGGCGAAGGATGCTaGATGTCCTGCAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GRRMLHVLQWAQRPCTGEWGEGC*MSCSGH
Trigger: GTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCA...CTCCCCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR GCA 90 bp TGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACCTGAGGGCTGGAGGGTaGCAAGGGCAGCTGCTGACC +
Preference number: 4 (lower is better)
Translates to: WSGAKDAACPAVGTAALHLRAGG*QGQLLT
Trigger: GGTCAGCAGCTGCCCTTGGCACCCTCCAGCCCTCAG...GTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp CCTGGTGCTTCAGGAGCTGGGTGCTGGGGAAGCCACATGCACTGCGGCGTCCAGTACGCCCATTCCACATaGGGGCGACCAGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGASGAGCWGSHMHCGVQYAHST*GRPGAG
Trigger: CCCTGCGCCTGGTCGCCCCCATGTGGAATGGGCGTA...CTGGACGCCGCAGTGCATGTGGCTTCCCCAGCACCCAGCTCCTGAAGCACCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGGGAGCAACGAGTCGGCCAGTaGGTAGAGGCGGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: GRRMLHVLQWAQRPCTGEQRVGQ*VEAAET
Trigger: TGTCTCAGCCGCCTCTACCCACTGGCCGACTCGTTG...CTCCCCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000592922.6
ENST00000594660.5
CDS-3UTR CCA 90 bp TGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACAGGCAGGGACAGGGCTaGCTGTGTCCCGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: WSGAKDAACPAVGTAALHRQGQG*LCPEAA
Trigger: AGCAGCCTCGGGACACAGCCAGCCCTGTCCCTGCCT...GTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp AGGGCAGCTGCTGACCGCCTGGTGCTTCAGGAGCTGGGTGCTGGGGAAGCCACAAGGCAGGGACAGGGCTaGCTGTGTCCCGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RAAADRLVLQELGAGEATRQGQG*LCPEAA
Trigger: AGCAGCCTCGGGACACAGCCAGCCCTGTCCCTGCCT...TGTGGCTTCCCCAGCACCCAGCTCCTGAAGCACCAGGCGGTCAGCAGCTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGGGAGCTCTCTCCTGTGATTaGCCAGCACCACTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: GAKDAACPAVGTAALHGGALSCD*PAPLPH
Trigger: GTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGC...TCCCCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GTGAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCCTGCATGTCCTGCAGTaGGCACAGCGGCCCTGCACG +
Preference number: 4 (lower is better)
Translates to: VSGVGRRMLHVLQWAQRPLHVLQ*AQRPCT
Trigger: CGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAG...GGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR TCA 90 bp GGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGGGAGCTCCCTGCTTCAGGATaGAAAAGGCACCTGCGCCGT +
Preference number: 4 (lower is better)
Translates to: GRRMLHVLQWAQRPCTGELPASG*KRHLRR
Trigger: ACGGCGCAGGTGCCTTTTTCATCCTGAAGCAGGGAG...CTCCCCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000594660.5
CDS-3UTR TCA 90 bp TGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGTGGGTAGAGGCGGCTaGGACACCAGTCGTCCACGT +
Preference number: 4 (lower is better)
Translates to: WSGAKDAACPAVGTAALHVGRGG*DTSRPR
Trigger: ACGTGGACGACTGGTGTCTCAGCCGCCTCTACCCAC...GTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000592922.6
ENST00000594660.5
CDS-3UTR TCA 90 bp AGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGTTACCTCCCCAGGCCTaGACAGGGGCATGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SGAKDAACPAVGTAALHGLPPQA*TGAWKG
Trigger: CCCTTTCCATGCCCCTGTTCAGGCCTGGGGAGGTAA...CCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp GTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCAACGTGGCAGCAGCGCTaGAGCGACAAGGACTGGAGC +
Preference number: 4 (lower is better)
Translates to: VEWGEGCCMSCSGHSGPATWQQR*SDKDWS
Trigger: GCTCCAGTCCTTGTCGCTGCAGCGCTGCTGCCACGT...TGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000592922.6
ENST00000594660.5
CDS-3UTR GCA 90 bp GTCTCCTACGCAACTTCTGAGGGCTGGAGGGTGCCAAGGGCAGCTGCTGACCGCGCTGTGTCCCGAGGCTaGTCCTCCGGCCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: VSYATSEGWRVPRAAADRAVSRG*SSGPDF
Trigger: GAAGTCAGGGCCGGAGGAGCAGCCTCGGGACACAGC...GCGGTCAGCAGCTGCCCTTGGCACCCTCCAGCCCTCAGAAGTTGCGTAGGAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp GTGAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCCTGCTGACCGCCTGGTaGTTCAGGAGCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VSGVGRRMLHVLQWAQRPLLTAW*FRSWVL
Trigger: CAGCACCCAGCTCCTGAAGCACCAGGCGGTCAGCAG...GGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp AGTGAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCGCCGCACCCAGGCGATaGATGCCCCTGATACGCCCA +
Preference number: 4 (lower is better)
Translates to: SEWSGAKDAACPAVGTAAAAPRR*MPLIRP
Trigger: TGGGCGTATCAGGGGCATCCATCGCCTGGGTGCGGC...GGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACTTCTGATTGCCCTCTaGGGCCACTGCCGCACCCAG +
Preference number: 4 (lower is better)
Translates to: VEWGEGCCMSCSGHSGPALLIAL*GHCRTQ
Trigger: CTGGGTGCGGCAGTGGCCCCAGAGGGCAATCAGAAG...TGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGGGGCCTGGGGTGCGCTaGCCTTTAGTGAGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: EWSGAKDAACPAVGTAALGPGVR*PLVSGV
Trigger: CACTCCACTCACTAAAGGCCAGCGCACCCCAGGCCC...CAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR CCA 90 bp CCGTTCGGAGATGCGGGGGCAACCGGCCAGCGAGAGCTCCTGCAACGAGTCGGCTGCATCTGGGTTAGGTaGGAGAGGTGCCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: PFGDAGATGQRELLQRVGCIWVR*ERCLGM
Trigger: CATGCCCAGGCACCTCTCCCACCTAACCCAGATGCA...GCCGACTCGTTGCAGGAGCTCTCGCTGGCCGGTTGCCCCCGCATCTCCGAACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594339.1
CDS-3UTR TCA 90 bp GAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGGGCGATGGATGCCCCTaGTACGCCCATTCCACATGG +
Preference number: 4 (lower is better)
Translates to: EWSGAKDAACPAVGTAALGDGCP*YAHSTW
Trigger: CCATGTGGAATGGGCGTATCAGGGGCATCCATCGCC...CAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp AGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGCCACCAATATCTGAGTaGGGCCAGGGTTGGACACGG +
Preference number: 4 (lower is better)
Translates to: SGAKDAACPAVGTAALHGPPISE*GQGWTR
Trigger: CCGTGTCCAACCCTGGCCTCACTCAGATATTGGTGG...CCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR TCA 90 bp GAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGCTGCTCCTCCGGCCCTaGCTTCAGGCCCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: ELPDIPCSPLRSHVSGDRLLLRP*LQALSP
Trigger: TGGGCTGAGGGCCTGAAGTCAGGGCCGGAGGAGCAG...CCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp GGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACCTGCTCCTCCGGCCCTaGCTTCAGGCCCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GELPDIPCSPLRSHVSGDLLLRP*LQALSP
Trigger: TGGGCTGAGGGCCTGAAGTCAGGGCCGGAGGAGCAG...GTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp GAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGTCACGCTCTCTCCTGTaGTTGGCCAGCACCACTCCC +
Preference number: 4 (lower is better)
Translates to: EWSGAKDAACPAVGTAALSRSLL*LASTTP
Trigger: GGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGA...CAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp GAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCTCCTACGCAACTTCTaGGGGCTGGAGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: EWSGAKDAACPAVGTAALLLRNF*GLEGAK
Trigger: CTTGGCACCCTCCAGCCCTCAGAAGTTGCGTAGGAG...CAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp GGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACGCCCTCTGGGGCCACTaGCGCACCCAGGCGATGGAT +
Preference number: 4 (lower is better)
Translates to: GELPDIPCSPLRSHVSGDALWGH*RTQAMD
Trigger: ATCCATCGCCTGGGTGCGGCAGTGGCCCCAGAGGGC...GTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR GCA 90 bp TACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCTGGCCCTCTGGGGCCACTaGCGCACCCAGGCGATGGAT +
Preference number: 4 (lower is better)
Translates to: YWELTLSPVIGQHHSPTLALWGH*RTQAMD
Trigger: ATCCATCGCCTGGGTGCGGCAGTGGCCCCAGAGGGC...CAGGGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR GCA 90 bp GAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCCGAGATGTCCAGCCTaGGGAGGTTCTGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: EWSGAKDAACPAVGTAALPRCPA*GGSGGG
Trigger: ACCACCTCCAGAACCTCCGCAGGCTGGACATCTCGG...CAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000592922.6
ENST00000594660.5
CDS-3UTR GCA 90 bp AGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCTGGGGCGAAGGATGCTaGATGTCCTGCAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SGVGRRMLHVLQWAQRPCWGEGC*MSCSGH
Trigger: GTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCA...GCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR GCA 90 bp GAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGTGGGGCGAAGGATGCTaGATGTCCTGCAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: EWSGAKDAACPAVGTAALWGEGC*MSCSGH
Trigger: GTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCA...CAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR GCA 90 bp CCTGGTGCTTCAGGAGCTGGGTGCTGGGGAAGCCACATGCACTGCGGCGTCCAGGGAAGCCACATGCACTaGGGCGTCCAGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGASGAGCWGSHMHCGVQGSHMH*GVQRQK
Trigger: CTTCTGCCTCTGGACGCCGCAGTGCATGTGGCTTCC...CTGGACGCCGCAGTGCATGTGGCTTCCCCAGCACCCAGCTCCTGAAGCACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp AGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCGCTTCAGGAGCTGGGTaGTGGGGAAGCCACATGCAC +
Preference number: 4 (lower is better)
Translates to: SGVGRRMLHVLQWAQRPCASGAG*WGSHMH
Trigger: GTGCATGTGGCTTCCCCAGCACCCAGCTCCTGAAGC...GCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp GGCCCCGTTCGGAGATGCGGGGGCAACCGGCCAGCGAGAGCTCCTGCAACGAGTGGGGGATATGAGAACTaGCTAACATTGCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GPVRRCGGNRPARAPATSGGYEN*LTLPLP
Trigger: GGGGAGGGGCAATGTTAGGCAGTTCTCATATCCCCC...ACTCGTTGCAGGAGCTCTCGCTGGCCGGTTGCCCCCGCATCTCCGAACGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000594339.1
CDS-3UTR CCA 90 bp GTCTCCTACGCAACTTCTGAGGGCTGGAGGGTGCCAAGGGCAGCTGCTGACCGCCTTCTGATTGCCCTCTaGGGCCACTGCCGCACCCAG +
Preference number: 4 (lower is better)
Translates to: VSYATSEGWRVPRAAADRLLIAL*GHCRTQ
Trigger: CTGGGTGCGGCAGTGGCCCCAGAGGGCAATCAGAAG...GCGGTCAGCAGCTGCCCTTGGCACCCTCCAGCCCTCAGAAGTTGCGTAGGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGCGGAGGTTCTGGAGGTaGTGGAGGCAGGCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: ELPDIPCSPLRSHVSGDRRRFWR*WRQARP
Trigger: GGGCCTCGCCTGCCTCCACCACCTCCAGAACCTCCG...CCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000417807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGGGAGCCACAACCTCGCAATTaGGCAGCATCTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: GRRMLHVLQWAQRPCTGEPQPRN*AASPPP
Trigger: TGGTGGAGGAGATGCTGCCCAATTGCGAGGTTGTGG...CTCCCCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp GTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACTCCCTGCTTCAGGATaGAAAAGGCACCTGCGCCGT +
Preference number: 4 (lower is better)
Translates to: VEWGEGCCMSCSGHSGPALPASG*KRHLRR
Trigger: ACGGCGCAGGTGCCTTTTTCATCCTGAAGCAGGGAG...TGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000594660.5
CDS-3UTR TCA 90 bp GAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCCAGGCCCTCGTAGTTaGTGTCACAGTCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: EWSGAKDAACPAVGTAALPGPRS*CHSHRH
Trigger: ATGCCGGTGACTGTGACATCAACTACGAGGGCCTGG...CAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR TCA 90 bp GGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACGCCAAGGGCAGCTGCTaGCCGCCTGGTGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: GELPDIPCSPLRSHVSGDAKGSC*PPGASG
Trigger: TCCTGAAGCACCAGGCGGTCAGCAGCTGCCCTTGGC...GTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp AGTGAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTCCTACGCAACTTCTaGGGGCTGGAGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SEWSGAKDAACPAVGTAALLRNF*GLEGAK
Trigger: CTTGGCACCCTCCAGCCCTCAGAAGTTGCGTAGGAG...GGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp CTCCCCACTTCCTCTCCTGCATCTGGGTTAGGTGGGAGAGGTGCCTGGGCATGTGCCAGCGAGAGCTCCTaGAACGAGTCGGCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LPTSSPASGLGGRGAWACASESS*NESASG
Trigger: CCCACTGGCCGACTCGTTGCAGGAGCTCTCGCTGGC...ACATGCCCAGGCACCTCTCCCACCTAACCCAGATGCAGGAGAGGAAGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR GCA 90 bp AGTGAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCCGAGATGTCCAGCCTaGGGAGGTTCTGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: SEWSGAKDAACPAVGTAAPRCPA*GGSGGG
Trigger: ACCACCTCCAGAACCTCCGCAGGCTGGACATCTCGG...GGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000592922.6
ENST00000594660.5
CDS-3UTR GCA 90 bp TACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCTGGCTGTGTCCCGAGGCTaGTCCTCCGGCCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: YWELTLSPVIGQHHSPTLAVSRG*SSGPDF
Trigger: GAAGTCAGGGCCGGAGGAGCAGCCTCGGGACACAGC...CAGGGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR GCA 90 bp GGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGGGAGTCAGTCAGGGTCCCTaGAAGAAATGGCAGTGCACT +
Preference number: 4 (lower is better)
Translates to: GAKDAACPAVGTAALHGGVSQGP*KKWQCT
Trigger: AGTGCACTGCCATTTCTTGCAGGGACCCTGACTGAC...TCCCCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp TGGGCACAGCGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTATGGGCACAGCGGCCCTaGACGGGGGAGAACCATCCC +
Preference number: 4 (lower is better)
Translates to: WAQRPCTGENHPCKVSVVWAQRP*TGENHP
Trigger: GGGATGGTTCTCCCCCGTGCAGGGCCGCTGTGCCCA...TACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCGCTGTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR CCA 90 bp CTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGGCTTACGCCCATTCCACATaGGGGCGACCAGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPDIPCSPLRSHVSGDRAYAHST*GRPGAG
Trigger: CCCTGCGCCTGGTCGCCCCCATGTGGAATGGGCGTA...AGCCCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp TGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCTGACGCTTCTGATTGCCCTCTaGGGCCACTGCCGCACCCAG +
Preference number: 4 (lower is better)
Translates to: WELTLSPVIGQHHSPTLTLLIAL*GHCRTQ
Trigger: CTGGGTGCGGCAGTGGCCCCAGAGGGCAATCAGAAG...CGTCAGGGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp AGTGAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCTGCAGCGACAAGGACTaGAGCTCCTTCAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: SEWSGAKDAACPAVGTAACSDKD*SSFRRR
Trigger: CCTCCGCCTGAAGGAGCTCCAGTCCTTGTCGCTGCA...GGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000592922.6
ENST00000594660.5
CDS-3UTR CCA 90 bp CTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGGCTAGGTTCTGGAGGTGGTaGAGGCAGGCGAGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: LPDIPCSPLRSHVSGDRARFWRW*RQARPR
Trigger: ACGGGGCCTCGCCTGCCTCCACCACCTCCAGAACCT...AGCCCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000417807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp CAGCGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTAGCCTGCGGAGGTTCTaGAGGTGGTGGAGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: QRPCTGENHPCKVSVVAPSLRRF*RWWRQA
Trigger: CGCCTGCCTCCACCACCTCCAGAACCTCCGCAGGCT...AGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000592922.6
ENST00000594660.5
CDS-3UTR CCA 90 bp CGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGAGCCTGCGGAGGTTCTaGAGGTGGTGGAGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: RPCTGENHPCKVSVVAPVSLRRF*RWWRQA
Trigger: CGCCTGCCTCCACCACCTCCAGAACCTCCGCAGGCT...CACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000592922.6
ENST00000594660.5
CDS-3UTR CCA 90 bp GGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGCAGGGACAGGGCTaGCTGTGTCCCGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GELPDIPCSPLRSHVSGDRQGQG*LCPEAA
Trigger: AGCAGCCTCGGGACACAGCCAGCCCTGTCCCTGCCT...GTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp GACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGGCTAAAGGCCTGCATGTCCTGCAGTaGGCACAGCGGCCCTGCACG +
Preference number: 4 (lower is better)
Translates to: DIPCSPLRSHVSGDRAKGLHVLQ*AQRPCT
Trigger: CGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAG...GCCTTTAGCCCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301183.15
ENST00000438807.7
CDS-3UTR CCA 90 bp CCCAGAGAGGTGCCTCAGTGGAGGCGCTGTGTCTCCTACGCAACTTCTGAGGGCGGGCCTGGGGTGCGCTaGCCTTTAGTGAGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: PREVPQWRRCVSYATSEGGPGVR*PLVSGV
Trigger: CACTCCACTCACTAAAGGCCAGCGCACCCCAGGCCC...GCCCTCAGAAGTTGCGTAGGAGACACAGCGCCTCCACTGAGGCACCTCTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGTGGTGCTTCAGGAGCTaGGTGCTGGGGAAGCCACAT +
Preference number: 4 (lower is better)
Translates to: EWSGAKDAACPAVGTAALWCFRS*VLGKPH
Trigger: ATGTGGCTTCCCCAGCACCCAGCTCCTGAAGCACCA...CAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGAGGGTCCCTCGCAATTaGGCAGCATCTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: EWSGAKDAACPAVGTAALRVPRN*AASPPP
Trigger: TGGTGGAGGAGATGCTGCCCAATTGCGAGGGACCCT...CAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594660.5
CDS-3UTR TCA 90 bp AGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGGTCCTTTTCTTCTTCTaGTTGCCCTCTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: SGAKDAACPAVGTAALHGVLFFF*LPSGAT
Trigger: AGTGGCCCCAGAGGGCAATCAGAAGAAGAAAAGGAC...CCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp CGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGGTGGGTAGAGGCGGCTaGGACACCAGTCGTCCACGT +
Preference number: 4 (lower is better)
Translates to: RPCTGENHPCKVSVVAPVVGRGG*DTSRPR
Trigger: ACGTGGACGACTGGTGTCTCAGCCGCCTCTACCCAC...CACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000592922.6
ENST00000594660.5
CDS-3UTR TCA 90 bp AGTGAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCCACCAATATCTGAGTaGGGCCAGGGTTGGACACGG +
Preference number: 4 (lower is better)
Translates to: SEWSGAKDAACPAVGTAAPPISE*GQGWTR
Trigger: CCGTGTCCAACCCTGGCCTCACTCAGATATTGGTGG...GGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR TCA 90 bp GGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGGGAAAGCCAGAAGTGTGGTaGGCTACCAGACATTCCATG +
Preference number: 4 (lower is better)
Translates to: GAKDAACPAVGTAALHGGKPEVW*ATRHSM
Trigger: CATGGAATGTCTGGTAGCTCACCACACTTCTGGCTT...TCCCCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp GGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGGGAGCACCCTGACGTTGAGTaGAGACAAATGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GRRMLHVLQWAQRPCTGEHPDVE*RQMEAR
Trigger: TCTGGCTTCCATTTGTCTTCACTCAACGTCAGGGTG...CTCCCCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp CCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCAGCCCTCTGGGGCCACTaGCGCACCCAGGCGATGGAT +
Preference number: 4 (lower is better)
Translates to: PCTGENHPCKVSVVAPVSALWGH*RTQAMD
Trigger: ATCCATCGCCTGGGTGCGGCAGTGGCCCCAGAGGGC...TGACACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp GTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGGTTGACTGCGCCTCCCTaGTTCAGGATGAAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: VGRRMLHVLQWAQRPCTGLTAPP*FRMKKA
Trigger: TGCCTTTTTCATCCTGAAGCAGGGAGGCGCAGTCAA...CCCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000594660.5
CDS-3UTR GCA 90 bp CGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGACGTGGCAGCAGCGCTaGAGCGACAAGGACTGGAGC +
Preference number: 4 (lower is better)
Translates to: RPCTGENHPCKVSVVAPVTWQQR*SDKDWS
Trigger: GCTCCAGTCCTTGTCGCTGCAGCGCTGCTGCCACGT...CACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000592922.6
ENST00000594660.5
CDS-3UTR GCA 90 bp CTTCTGAGGGCTGGAGGGTGCCAAGGGCAGCTGCTGACCGCCTGGTGCTTCAGGCTACCAGACATTCCATaGAGCCCGCTGAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LLRAGGCQGQLLTAWCFRLPDIP*SPLRSH
Trigger: GTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAG...CCTGAAGCACCAGGCGGTCAGCAGCTGCCCTTGGCACCCTCCAGCCCTCAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp AAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCTGGGCACAGCGGCCCTaGACGGGGGAGAACCATCCC +
Preference number: 4 (lower is better)
Translates to: KYWELTLSPVIGQHHSPTWAQRP*TGENHP
Trigger: GGGATGGTTCTCCCCCGTGCAGGGCCGCTGTGCCCA...GGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp CCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCATGGGCACAGCGGCCCTaGACGGGGGAGAACCATCCC +
Preference number: 4 (lower is better)
Translates to: PCTGENHPCKVSVVAPVSWAQRP*TGENHP
Trigger: GGGATGGTTCTCCCCCGTGCAGGGCCGCTGTGCCCA...TGACACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR CCA 90 bp TGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGTACGCCCATTCCACATaGGGGCGACCAGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: CGELPDIPCSPLRSHVSGYAHST*GRPGAG
Trigger: CCCTGCGCCTGGTCGCCCCCATGTGGAATGGGCGTA...CCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp AAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCATACGCCCATTCCACATaGGGGCGACCAGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: KGLPDRVTGAVTFSQGQPYAHST*GRPGAG
Trigger: CCCTGCGCCTGGTCGCCCCCATGTGGAATGGGCGTA...TGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp AAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGCCGCACCCAGGCGATaGATGCCCCTGATACGCCCA +
Preference number: 4 (lower is better)
Translates to: KGLPDRVTGAVTFSQGQPAAPRR*MPLIRP
Trigger: TGGGCGTATCAGGGGCATCCATCGCCTGGGTGCGGC...TGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp AGTGAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCGGCACCTGCGCCGTATaGACCATGTTGCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SEWSGAKDAACPAVGTAAGTCAV*TMLLLQ
Trigger: CTGGAGAAGCAACATGGTCCATACGGCGCAGGTGCC...GGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221943.14
ENST00000301183.15
CDS-3UTR CCA 90 bp TGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCTGACGTGCAGCGACAAGGACTaGAGCTCCTTCAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: WELTLSPVIGQHHSPTLTCSDKD*SSFRRR
Trigger: CCTCCGCCTGAAGGAGCTCCAGTCCTTGTCGCTGCA...CGTCAGGGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000417807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp AAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAAGCCTGCGGAGGTTCTaGAGGTGGTGGAGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: KGLPDRVTGAVTFSQGQPSLRRF*RWWRQA
Trigger: CGCCTGCCTCCACCACCTCCAGAACCTCCGCAGGCT...TGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000417807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp TGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACCTGGCCTTTAGTGAGTaGAGTGGGGCGAAGGATGCT +
Preference number: 4 (lower is better)
Translates to: WSGAKDAACPAVGTAALHLAFSE*SGAKDA
Trigger: AGCATCCTTCGCCCCACTCCACTCACTAAAGGCCAG...GTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR CCA 90 bp GAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCAATACTATGGGGCCTaGGGTGCGCTGGCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: EWSGAKDAACPAVGTAALQYYGA*GALAFS
Trigger: ACTAAAGGCCAGCGCACCCCAGGCCCCATAGTATTG...CAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp CCCAGAGAGGTGCCTCAGTGGAGGCGCTGTGTCTCCTACGCAACTTCTGAGGGCTCAGGAGCTGGGTGCTaGGGAAGCCACATGCACTGC +
Preference number: 4 (lower is better)
Translates to: PREVPQWRRCVSYATSEGSGAGC*GSHMHC
Trigger: GCAGTGCATGTGGCTTCCCCAGCACCCAGCTCCTGA...GCCCTCAGAAGTTGCGTAGGAGACACAGCGCCTCCACTGAGGCACCTCTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp GTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCAGTCCTTTTCTTCTTCTaGTTGCCCTCTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: VEWGEGCCMSCSGHSGPAVLFFF*LPSGAT
Trigger: AGTGGCCCCAGAGGGCAATCAGAAGAAGAAAAGGAC...TGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp AGTGAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCCTTGTCTCGAAACTTaGCTGCGCCTCCCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SEWSGAKDAACPAVGTAAPCLET*LRLPAS
Trigger: TGAAGCAGGGAGGCGCAGTCAAGTTTCGAGACAAGG...GGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000594660.5
CDS-3UTR TCA 90 bp AGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGAAGCCAGAAGTGTGGTaGGCTACCAGACATTCCATG +
Preference number: 4 (lower is better)
Translates to: SGAKDAACPAVGTAALHGKPEVW*ATRHSM
Trigger: CATGGAATGTCTGGTAGCTCACCACACTTCTGGCTT...CCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp GAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGTTACCTCCCCAGGCCTaGACAGGGGCATGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: ELPDIPCSPLRSHVSGDRLPPQA*TGAWKG
Trigger: CCCTTTCCATGCCCCTGTTCAGGCCTGGGGAGGTAA...CCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp CTGAGCCTTTACCTCCCCAGGCCTGAACAGGGGCATGGAAAGGGCTGCCTGACACGGCTACTAACAGCCTaGGCCTTTACCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LSLYLPRPEQGHGKGCLTRLLTA*AFTSPG
Trigger: GCCTGGGGAGGTAAAGGCTCAGGCTGTTAGTAGCCG...TGTCAGGCAGCCCTTTCCATGCCCCTGTTCAGGCCTGGGGAGGTAAAGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp GAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGCGGCTACTAACAGCCTaGGCCTTTACCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ELPDIPCSPLRSHVSGDRRLLTA*AFTSPG
Trigger: GCCTGGGGAGGTAAAGGCTCAGGCTGTTAGTAGCCG...CCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR GCA 90 bp GGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACCCGAGATGTCCAGCCTaGGGAGGTTCTGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GELPDIPCSPLRSHVSGDPRCPA*GGSGGG
Trigger: ACCACCTCCAGAACCTCCGCAGGCTGGACATCTCGG...GTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000417807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp GTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCAGTCAGTCAGGGTCCCTaGAAGAAATGGCAGTGCACT +
Preference number: 4 (lower is better)
Translates to: VEWGEGCCMSCSGHSGPAVSQGP*KKWQCT
Trigger: AGTGCACTGCCATTTCTTGCAGGGACCCTGACTGAC...TGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp AAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTTGGGCACAGCGGCCCTaGACGGGGGAGAACCATCCC +
Preference number: 4 (lower is better)
Translates to: KCGELPDIPCSPLRSHVSWAQRP*TGENHP
Trigger: GGGATGGTTCTCCCCCGTGCAGGGCCGCTGTGCCCA...ACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp GTGCTGGGGAACGTTATTCCCAGAGAGGTGCCTCAGTGGAGGCGCTGTGTCTCCGCTTCAGGAGCTGGGTaGTGGGGAAGCCACATGCAC +
Preference number: 4 (lower is better)
Translates to: VLGNVIPREVPQWRRCVSASGAG*WGSHMH
Trigger: GTGCATGTGGCTTCCCCAGCACCCAGCTCCTGAAGC...GGAGACACAGCGCCTCCACTGAGGCACCTCTCTGGGAATAACGTTCCCCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp AAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCACTTCTGATTGCCCTCTaGGGCCACTGCCGCACCCAG +
Preference number: 4 (lower is better)
Translates to: KGLPDRVTGAVTFSQGQPLLIAL*GHCRTQ
Trigger: CTGGGTGCGGCAGTGGCCCCAGAGGGCAATCAGAAG...TGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp GGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACTGCAGCGACAAGGACTaGAGCTCCTTCAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: GELPDIPCSPLRSHVSGDCSDKD*SSFRRR
Trigger: CCTCCGCCTGAAGGAGCTCCAGTCCTTGTCGCTGCA...GTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000417807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp TACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCTGCAACGAGTCGGCCAGTaGGTAGAGGCGGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: YWELTLSPVIGQHHSPTLQRVGQ*VEAAET
Trigger: TGTCTCAGCCGCCTCTACCCACTGGCCGACTCGTTG...CAGGGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000417807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp CTCCCCACTTCCTCTCCTGCATCTGGGTTAGGTGGGAGAGGTGCCTGGGCATGTCAACGAGTCGGCCAGTaGGTAGAGGCGGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: LPTSSPASGLGGRGAWACQRVGQ*VEAAET
Trigger: TGTCTCAGCCGCCTCTACCCACTGGCCGACTCGTTG...ACATGCCCAGGCACCTCTCCCACCTAACCCAGATGCAGGAGAGGAAGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR CCA 90 bp CCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCAAGGTTCTGGAGGTGGTaGAGGCAGGCGAGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: PCTGENHPCKVSVVAPVSRFWRW*RQARPR
Trigger: ACGGGGCCTCGCCTGCCTCCACCACCTCCAGAACCT...TGACACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000592922.6
ENST00000594660.5
CDS-3UTR CCA 90 bp CTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGGCTGCTCTCTCCTGTGATTaGCCAGCACCACTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LPDIPCSPLRSHVSGDRAALSCD*PAPLPH
Trigger: GTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGC...AGCCCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp CAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGCTGCATGTCCTGCAGTaGGCACAGCGGCCCTGCACG +
Preference number: 4 (lower is better)
Translates to: QKCGELPDIPCSPLRSHVLHVLQ*AQRPCT
Trigger: CGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAG...CACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp CCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCACTGCATGTCCTGCAGTaGGCACAGCGGCCCTGCACG +
Preference number: 4 (lower is better)
Translates to: PCTGENHPCKVSVVAPVSLHVLQ*AQRPCT
Trigger: CGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAG...TGACACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR CCA 90 bp TGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGGGCCTGGGGTGCGCTaGCCTTTAGTGAGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: CGELPDIPCSPLRSHVSGGPGVR*PLVSGV
Trigger: CACTCCACTCACTAAAGGCCAGCGCACCCCAGGCCC...CCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp TACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCTGGCAACTTCTGAGGGCTaGAGGGTGCCAAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: YWELTLSPVIGQHHSPTLATSEG*RVPRAA
Trigger: AGCTGCCCTTGGCACCCTCCAGCCCTCAGAAGTTGC...CAGGGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp TGGGCACAGCGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGGCGATGGATGCCCCTaGTACGCCCATTCCACATGG +
Preference number: 4 (lower is better)
Translates to: WAQRPCTGENHPCKVSVVGDGCP*YAHSTW
Trigger: CCATGTGGAATGGGCGTATCAGGGGCATCCATCGCC...TACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCGCTGTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp CTGAGCCTTTACCTCCCCAGGCCTGAACAGGGGCATGGAAAGGGCTGCCTGACACTCCCTGCTTCAGGATaGAAAAGGCACCTGCGCCGT +
Preference number: 4 (lower is better)
Translates to: LSLYLPRPEQGHGKGCLTLPASG*KRHLRR
Trigger: ACGGCGCAGGTGCCTTTTTCATCCTGAAGCAGGGAG...TGTCAGGCAGCCCTTTCCATGCCCCTGTTCAGGCCTGGGGAGGTAAAGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000589970.5
CDS-3UTR TCA 90 bp CTGAGCCTTTACCTCCCCAGGCCTGAACAGGGGCATGGAAAGGGCTGCCTGACACCAGGCCCTCGTAGTTaGTGTCACAGTCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: LSLYLPRPEQGHGKGCLTPGPRS*CHSHRH
Trigger: ATGCCGGTGACTGTGACATCAACTACGAGGGCCTGG...TGTCAGGCAGCCCTTTCCATGCCCCTGTTCAGGCCTGGGGAGGTAAAGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp TACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCTGCCAGGCCCTCGTAGTTaGTGTCACAGTCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: YWELTLSPVIGQHHSPTLPGPRS*CHSHRH
Trigger: ATGCCGGTGACTGTGACATCAACTACGAGGGCCTGG...CAGGGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp CCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCAGTGGGTAGAGGCGGCTaGGACACCAGTCGTCCACGT +
Preference number: 4 (lower is better)
Translates to: PCTGENHPCKVSVVAPVSVGRGG*DTSRPR
Trigger: ACGTGGACGACTGGTGTCTCAGCCGCCTCTACCCAC...TGACACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000592922.6
ENST00000594660.5
CDS-3UTR TCA 90 bp AATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCCTGCTCCTCCGGCCCTaGCTTCAGGCCCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: NKYWELTLSPVIGQHHSPLLLRP*LQALSP
Trigger: TGGGCTGAGGGCCTGAAGTCAGGGCCGGAGGAGCAG...GGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp GGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCCTGCTCCTCCGGCCCTaGCTTCAGGCCCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GAVTFSQGQPGINTGNSRLLLRP*LQALSP
Trigger: TGGGCTGAGGGCCTGAAGTCAGGGCCGGAGGAGCAG...GCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp TGGAAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGTCACGCTCTCTCCTGTaGTTGGCCAGCACCACTCCC +
Preference number: 4 (lower is better)
Translates to: WKGLPDRVTGAVTFSQGQSRSLL*LASTTP
Trigger: GGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGA...CTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp TGGGCACAGCGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTATCACGCTCTCTCCTGTaGTTGGCCAGCACCACTCCC +
Preference number: 4 (lower is better)
Translates to: WAQRPCTGENHPCKVSVVSRSLL*LASTTP
Trigger: GGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGA...TACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCGCTGTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp TGGAAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGTTACCTCCCCAGGCCTaGACAGGGGCATGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: WKGLPDRVTGAVTFSQGQLPPQA*TGAWKG
Trigger: CCCTTTCCATGCCCCTGTTCAGGCCTGGGGAGGTAA...CTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp CTGAGCCTTTACCTCCCCAGGCCTGAACAGGGGCATGGAAAGGGCTGCCTGACAAGTCTCCTGACAAGGTaGGTGTGGCTCTCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: LSLYLPRPEQGHGKGCLTSLLTR*VWLSAA
Trigger: AGCCGCAGAGAGCCACACTCACCTTGTCAGGAGACT...TGTCAGGCAGCCCTTTCCATGCCCCTGTTCAGGCCTGGGGAGGTAAAGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR GCA 90 bp AAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGCCAGCGAGAGCTCCTaGAACGAGTCGGCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KCGELPDIPCSPLRSHVSASESS*NESASG
Trigger: CCCACTGGCCGACTCGTTGCAGGAGCTCTCGCTGGC...ACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000417807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp TGGCTCTCTGCGGCTACTAACAGCCTGAGCCTTTACCTCCCCAGGCCTGAACAGTGGGGCGAAGGATGCTaGATGTCCTGCAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: WLSAATNSLSLYLPRPEQWGEGC*MSCSGH
Trigger: GTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCA...CTGTTCAGGCCTGGGGAGGTAAAGGCTCAGGCTGTTAGTAGCCGCAGAGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp AAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGAGTGGGGCGAAGGATaGTGCATGTCCTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KGLPDRVTGAVTFSQGQPEWGEG*CMSCSG
Trigger: CCCACTGCAGGACATGCAGCATCCTTCGCCCCACTC...TGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp TGGGCACAGCGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGAGTGGGGCGAAGGATaGTGCATGTCCTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: WAQRPCTGENHPCKVSVVEWGEG*CMSCSG
Trigger: CCCACTGCAGGACATGCAGCATCCTTCGCCCCACTC...TACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCGCTGTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR GCA 90 bp TGGAAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGGGAAGCCACATGCACTaGGGCGTCCAGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: WKGLPDRVTGAVTFSQGQGSHMH*GVQRQK
Trigger: CTTCTGCCTCTGGACGCCGCAGTGCATGTGGCTTCC...CTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp CCCAGAGAGGTGCCTCAGTGGAGGCGCTGTGTCTCCTACGCAACTTCTGAGGGCTTATTCCCAGAGAGGTaGCTCAGTGGAGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: PREVPQWRRCVSYATSEGLFPER*LSGGAV
Trigger: CACAGCGCCTCCACTGAGGCACCTCTCTGGGAATAA...GCCCTCAGAAGTTGCGTAGGAGACACAGCGCCTCCACTGAGGCACCTCTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp TGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGTGCAGCGACAAGGACTaGAGCTCCTTCAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: CGELPDIPCSPLRSHVSGCSDKD*SSFRRR
Trigger: CCTCCGCCTGAAGGAGCTCCAGTCCTTGTCGCTGCA...CCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000417807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp TGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCTGACGCCACAACCTCGCAATTaGGCAGCATCTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: WELTLSPVIGQHHSPTLTPQPRN*AASPPP
Trigger: TGGTGGAGGAGATGCTGCCCAATTGCGAGGTTGTGG...CGTCAGGGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp TGGCTCTCTGCGGCTACTAACAGCCTGAGCCTTTACCTCCCCAGGCCTGAACAGGCTCTCTCCTGTGATTaGCCAGCACCACTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: WLSAATNSLSLYLPRPEQALSCD*PAPLPH
Trigger: GTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGC...CTGTTCAGGCCTGGGGAGGTAAAGGCTCAGGCTGTTAGTAGCCGCAGAGAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp AAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCAGCTGCTGACCGCCTaGTGCTTCAGGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KYWELTLSPVIGQHHSPTQLLTA*CFRSWV
Trigger: CACCCAGCTCCTGAAGCACCAGGCGGTCAGCAGCTG...GGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp AAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCACTCCCTGCTTCAGGATaGAAAAGGCACCTGCGCCGT +
Preference number: 4 (lower is better)
Translates to: KGLPDRVTGAVTFSQGQPLPASG*KRHLRR
Trigger: ACGGCGCAGGTGCCTTTTTCATCCTGAAGCAGGGAG...TGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR TCA 90 bp CTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGGCTCCTTGTCTCGAAACTTaGCTGCGCCTCCCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: LPDIPCSPLRSHVSGDRAPCLET*LRLPAS
Trigger: TGAAGCAGGGAGGCGCAGTCAAGTTTCGAGACAAGG...AGCCCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR TCA 90 bp TGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACCATACTTATCTGGCCTaGTCCACTCCTTGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: WSGAKDAACPAVGTAALHHTYLA*STPCLE
Trigger: TTCGAGACAAGGAGTGGATCAGGCCAGATAAGTATG...GTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR TCA 90 bp TGGAAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGCCCTCGTAGTTaGTGTCACAGTCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: WKGLPDRVTGAVTFSQGQPGPRS*CHSHRH
Trigger: ATGCCGGTGACTGTGACATCAACTACGAGGGCCTGG...CTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp AAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCACCAGGCCCTCGTAGTTaGTGTCACAGTCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: KGLPDRVTGAVTFSQGQPPGPRS*CHSHRH
Trigger: ATGCCGGTGACTGTGACATCAACTACGAGGGCCTGG...TGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp AGGAGGCGCCTTTCCTCCTATAATGCCTGTTTGGTGCCCTCTACTGACAAAGCTCTGCTCCTCCGGCCCTaGCTTCAGGCCCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RRRLSSYNACLVPSTDKALLLRP*LQALSP
Trigger: TGGGCTGAGGGCCTGAAGTCAGGGCCGGAGGAGCAG...AGCTTTGTCAGTAGAGGGCACCAAACAGGCATTATAGGAGGAAAGGCGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp TGGGCACAGCGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAAGTCTCCTGACAAGGTaGGTGTGGCTCTCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: WAQRPCTGENHPCKVSVVSLLTR*VWLSAA
Trigger: AGCCGCAGAGAGCCACACTCACCTTGTCAGGAGACT...TACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCGCTGTGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp TGGCTCTCTGCGGCTACTAACAGCCTGAGCCTTTACCTCCCCAGGCCTGAACAGAGTCTCCTGACAAGGTaGGTGTGGCTCTCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: WLSAATNSLSLYLPRPEQSLLTR*VWLSAA
Trigger: AGCCGCAGAGAGCCACACTCACCTTGTCAGGAGACT...CTGTTCAGGCCTGGGGAGGTAAAGGCTCAGGCTGTTAGTAGCCGCAGAGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp AAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAAGTCTCCTGACAAGGTaGGTGTGGCTCTCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: KGLPDRVTGAVTFSQGQPSLLTR*VWLSAA
Trigger: AGCCGCAGAGAGCCACACTCACCTTGTCAGGAGACT...TGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp CCTGGTGCTTCAGGAGCTGGGTGCTGGGGAAGCCACATGCACTGCGGCGTCCAGTTTGGTGCCCTCTACTaGCAAAGCTTATCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: PGASGAGCWGSHMHCGVQFGALY*QSLSPF
Trigger: GAAAGGGGATAAGCTTTGTCAGTAGAGGGCACCAAA...CTGGACGCCGCAGTGCATGTGGCTTCCCCAGCACCCAGCTCCTGAAGCACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp AGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCGCCAAGGGCAGCTGCTaGCCGCCTGGTGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RQMEARSVVSYQTFHAARAKGSC*PPGASG
Trigger: TCCTGAAGCACCAGGCGGTCAGCAGCTGCCCTTGGC...GCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp CATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCAGTCAGGGTCCCTGCAAGAGCCAAGGGCAGCTGCTaGCCGCCTGGTGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: HPCKVSVVAPVSVRVPARAKGSC*PPGASG
Trigger: TCCTGAAGCACCAGGCGGTCAGCAGCTGCCCTTGGC...TCTTGCAGGGACCCTGACTGACACAGGGGCTACTACTGACACTTTACAGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp CGTGTGTGTGTGTGCGTGCGTGCATGCGTGCATGTGTGTGTGTATAGGGAGGTAACGTGGCAGCAGCGCTaGAGCGACAAGGACTGGAGC +
Preference number: 4 (lower is better)
Translates to: RVCVCVRACVHVCVYREVTWQQR*SDKDWS
Trigger: GCTCCAGTCCTTGTCGCTGCAGCGCTGCTGCCACGT...TACCTCCCTATACACACACACATGCACGCATGCACGCACGCACACACACACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR GCA 90 bp GGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACCTACCAGACATTCCATaGAGCCCGCTGAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GELPDIPCSPLRSHVSGDLPDIP*SPLRSH
Trigger: GTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAG...GTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR GCA 90 bp CAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGGAGTGGGGCGAAGGATaGTGCATGTCCTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: QKCGELPDIPCSPLRSHVEWGEG*CMSCSG
Trigger: CCCACTGCAGGACATGCAGCATCCTTCGCCCCACTC...CACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp CCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCAGAGTGGGGCGAAGGATaGTGCATGTCCTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PCTGENHPCKVSVVAPVSEWGEG*CMSCSG
Trigger: CCCACTGCAGGACATGCAGCATCCTTCGCCCCACTC...TGACACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR GCA 90 bp CCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCAGCTTCAGGAGCTGGGTaGTGGGGAAGCCACATGCAC +
Preference number: 4 (lower is better)
Translates to: PCTGENHPCKVSVVAPVSASGAG*WGSHMH
Trigger: GTGCATGTGGCTTCCCCAGCACCCAGCTCCTGAAGC...TGACACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp AATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCCTGAGGGCTGGAGGGTaGCAAGGGCAGCTGCTGACC +
Preference number: 4 (lower is better)
Translates to: NKYWELTLSPVIGQHHSPLRAGG*QGQLLT
Trigger: GGTCAGCAGCTGCCCTTGGCACCCTCCAGCCCTCAG...GGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp TACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCTGTTATTCCCAGAGAGGTaGCTCAGTGGAGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: YWELTLSPVIGQHHSPTLLFPER*LSGGAV
Trigger: CACAGCGCCTCCACTGAGGCACCTCTCTGGGAATAA...CAGGGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp TGGAAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCGAGATGTCCAGCCTaGGGAGGTTCGGAGGTTATC +
Preference number: 4 (lower is better)
Translates to: WKGLPDRVTGAVTFSQGQPRCPA*GGSEVI
Trigger: GATAACCTCCGAACCTCCGCAGGCTGGACATCTCGG...CTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
CDS-3UTR GCA 90 bp CTCCCCACTTCCTCTCCTGCATCTGGGTTAGGTGGGAGAGGTGCCTGGGCATGTTGCAACTCCAGCTCCTaGTGTTCTGCAACAGCGTCG +
Preference number: 4 (lower is better)
Translates to: LPTSSPASGLGGRGAWACCNSSS*CSATAS
Trigger: CGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCA...ACATGCCCAGGCACCTCTCCCACCTAACCCAGATGCAGGAGAGGAAGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR GCA 90 bp GGCCCCGTTCGGAGATGCGGGGGCAACCGGCCAGCGAGAGCTCCTGCAACGAGTGCCCACTGTGTTAATTaGAAATATGCAACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GPVRRCGGNRPARAPATSAHCVN*KYATPA
Trigger: AGCTGGAGTTGCATATTTGCAATTAACACAGTGGGC...ACTCGTTGCAGGAGCTCTCGCTGGCCGGTTGCCCCCGCATCTCCGAACGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594339.1
CDS-3UTR CCA 90 bp CATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCAGTCAGGGTCCCTGCAAGAGCCGCACCCAGGCGATaGATGCCCCTGATACGCCCA +
Preference number: 4 (lower is better)
Translates to: HPCKVSVVAPVSVRVPARAAPRR*MPLIRP
Trigger: TGGGCGTATCAGGGGCATCCATCGCCTGGGTGCGGC...TCTTGCAGGGACCCTGACTGACACAGGGGCTACTACTGACACTTTACAGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp CCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATGCCGCACCCAGGCGATaGATGCCCCTGATACGCCCA +
Preference number: 4 (lower is better)
Translates to: PDRVTGAVTFSQGQPGINAAPRR*MPLIRP
Trigger: TGGGCGTATCAGGGGCATCCATCGCCTGGGTGCGGC...ATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp CTGAGCCTTTACCTCCCCAGGCCTGAACAGGGGCATGGAAAGGGCTGCCTGACACTGGCCTTTAGTGAGTaGAGTGGGGCGAAGGATGCT +
Preference number: 4 (lower is better)
Translates to: LSLYLPRPEQGHGKGCLTLAFSE*SGAKDA
Trigger: AGCATCCTTCGCCCCACTCCACTCACTAAAGGCCAG...TGTCAGGCAGCCCTTTCCATGCCCCTGTTCAGGCCTGGGGAGGTAAAGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGCAATACTATGGGGCCTaGGGTGCGCTGGCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: ELPDIPCSPLRSHVSGDRQYYGA*GALAFS
Trigger: ACTAAAGGCCAGCGCACCCCAGGCCCCATAGTATTG...CCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp CAGCGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTCAATACTATGGGGCCTaGGGTGCGCTGGCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: QRPCTGENHPCKVSVVAPQYYGA*GALAFS
Trigger: ACTAAAGGCCAGCGCACCCCAGGCCCCATAGTATTG...AGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp TGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGTGGTGCTTCAGGAGCTaGGTGCTGGGGAAGCCACAT +
Preference number: 4 (lower is better)
Translates to: CGELPDIPCSPLRSHVSGWCFRS*VLGKPH
Trigger: ATGTGGCTTCCCCAGCACCCAGCTCCTGAAGCACCA...CCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCAGTCAGGGTCCAGCTGCTGACCGCCTaGTGCTTCAGGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GENHPCKVSVVAPVSVRVQLLTA*CFRSWV
Trigger: CACCCAGCTCCTGAAGCACCAGGCGGTCAGCAGCTG...GACCCTGACTGACACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp GGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCAGTCAGGGTCGGCGATGGATGCCCCTaGTACGCCCATTCCACATGG +
Preference number: 4 (lower is better)
Translates to: GENHPCKVSVVAPVSVRVGDGCP*YAHSTW
Trigger: CCATGTGGAATGGGCGTATCAGGGGCATCCATCGCC...GACCCTGACTGACACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp GGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACGTCCTTTTCTTCTTCTaGTTGCCCTCTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: GELPDIPCSPLRSHVSGDVLFFF*LPSGAT
Trigger: AGTGGCCCCAGAGGGCAATCAGAAGAAGAAAAGGAC...GTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp TGGGCACAGCGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTACCTTGTCTCGAAACTTaGCTGCGCCTCCCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: WAQRPCTGENHPCKVSVVPCLET*LRLPAS
Trigger: TGAAGCAGGGAGGCGCAGTCAAGTTTCGAGACAAGG...TACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCGCTGTGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000594660.5
CDS-3UTR TCA 90 bp AATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCGTGGGTAGAGGCGGCTaGGACACCAGTCGTCCACGT +
Preference number: 4 (lower is better)
Translates to: NKYWELTLSPVIGQHHSPVGRGG*DTSRPR
Trigger: ACGTGGACGACTGGTGTCTCAGCCGCCTCTACCCAC...GGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000417807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp CCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCACCACCAATATCTGAGTaGGGCCAGGGTTGGACACGG +
Preference number: 4 (lower is better)
Translates to: PCTGENHPCKVSVVAPVSPPISE*GQGWTR
Trigger: CCGTGTCCAACCCTGGCCTCACTCAGATATTGGTGG...TGACACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR GCA 90 bp ATTGACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCCGCCAGCGAGAGCTCCTaGAACGAGTCGGCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: IDWKSIWGAGERYSQRGAASESS*NESASG
Trigger: CCCACTGGCCGACTCGTTGCAGGAGCTCTCGCTGGC...GGCACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221943.14
ENST00000592922.6
CDS-3UTR GCA 90 bp GACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGCCAGCGAGAGCTCCTaGAACGAGTCGGCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: DRVTGAVTFSQGQPGINTASESS*NESASG
Trigger: CCCACTGGCCGACTCGTTGCAGGAGCTCTCGCTGGC...AGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000417807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp GACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGGCTAAAGGCGTCAGTCAGGGTCCCTaGAAGAAATGGCAGTGCACT +
Preference number: 4 (lower is better)
Translates to: DIPCSPLRSHVSGDRAKGVSQGP*KKWQCT
Trigger: AGTGCACTGCCATTTCTTGCAGGGACCCTGACTGAC...GCCTTTAGCCCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
CDS-3UTR GCA 90 bp CAGCGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTCAGTCAGGGTCCCTaGAAGAAATGGCAGTGCACT +
Preference number: 4 (lower is better)
Translates to: QRPCTGENHPCKVSVVAPVSQGP*KKWQCT
Trigger: AGTGCACTGCCATTTCTTGCAGGGACCCTGACTGAC...AGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp AAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCCGAGATGTCCAGCCTaGGGAGGTTCGGAGGTTATC +
Preference number: 4 (lower is better)
Translates to: KYWELTLSPVIGQHHSPTPRCPA*GGSEVI
Trigger: GATAACCTCCGAACCTCCGCAGGCTGGACATCTCGG...GGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
CDS-3UTR CCA 90 bp AGGAATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCTACGCCCATTCCACATaGGGGCGACCAGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: RNKYWELTLSPVIGQHHSYAHST*GRPGAG
Trigger: CCCTGCGCCTGGTCGCCCCCATGTGGAATGGGCGTA...GGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp CAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGGGCACCTGCGCCGTATaGACCATGTTGCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QKCGELPDIPCSPLRSHVGTCAV*TMLLLQ
Trigger: CTGGAGAAGCAACATGGTCCATACGGCGCAGGTGCC...CACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR CCA 90 bp AGGAATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCAGGTTCTGGAGGTGGTaGAGGCAGGCGAGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: RNKYWELTLSPVIGQHHSRFWRW*RQARPR
Trigger: ACGGGGCCTCGCCTGCCTCCACCACCTCCAGAACCT...GGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000417807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTAGGTTCTGGAGGTGGTaGAGGCAGGCGAGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: AVTFSQGQPGINTGNSRSRFWRW*RQARPR
Trigger: ACGGGGCCTCGCCTGCCTCCACCACCTCCAGAACCT...AGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000417807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp TGGGCACAGCGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTACCACAACCTCGCAATTaGGCAGCATCTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: WAQRPCTGENHPCKVSVVPQPRN*AASPPP
Trigger: TGGTGGAGGAGATGCTGCCCAATTGCGAGGTTGTGG...TACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCGCTGTGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTAGGCAGGGACAGGGCTaGCTGTGTCCCGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: AVTFSQGQPGINTGNSRSRQGQG*LCPEAA
Trigger: AGCAGCCTCGGGACACAGCCAGCCCTGTCCCTGCCT...AGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp AGGAATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCAGGCAGGGACAGGGCTaGCTGTGTCCCGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RNKYWELTLSPVIGQHHSRQGQG*LCPEAA
Trigger: AGCAGCCTCGGGACACAGCCAGCCCTGTCCCTGCCT...GGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp GGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGGGAGCTTTAACAGTGAACTaGAATAATGAGGGCTTCACT +
Preference number: 4 (lower is better)
Translates to: GAKDAACPAVGTAALHGGALTVN*NNEGFT
Trigger: AGTGAAGCCCTCATTATTCCAGTTCACTGTTAAAGC...TCCCCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp AAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTCCAGGCCCTCGTAGTTaGTGTCACAGTCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: KCGELPDIPCSPLRSHVSPGPRS*CHSHRH
Trigger: ATGCCGGTGACTGTGACATCAACTACGAGGGCCTGG...ACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGCGTGCGTGCATGCGTGCATGTGTGTGTGTATAGGGAGGTACCCAGGCCCTCGTAGTTaGTGTCACAGTCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: VCVCACVHACMCVCIGRYPGPRS*CHSHRH
Trigger: ATGCCGGTGACTGTGACATCAACTACGAGGGCCTGG...GTACCTCCCTATACACACACACATGCACGCATGCACGCACGCACACACACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR TCA 90 bp GAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGCACCCTGACGTTGAGTaGAGACAAATGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: ELPDIPCSPLRSHVSGDRHPDVE*RQMEAR
Trigger: TCTGGCTTCCATTTGTCTTCACTCAACGTCAGGGTG...CCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp CCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATTCACGCTCTCTCCTGTaGTTGGCCAGCACCACTCCC +
Preference number: 4 (lower is better)
Translates to: PDRVTGAVTFSQGQPGINSRSLL*LASTTP
Trigger: GGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGA...ATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp CATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCAGTCAGGGTCCCTGCAAGATTACCTCCCCAGGCCTaGACAGGGGCATGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: HPCKVSVVAPVSVRVPARLPPQA*TGAWKG
Trigger: CCCTTTCCATGCCCCTGTTCAGGCCTGGGGAGGTAA...TCTTGCAGGGACCCTGACTGACACAGGGGCTACTACTGACACTTTACAGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp CTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGGCTTTGAGAAGAGTCTCCTaGCAAGGTGAGTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LPDIPCSPLRSHVSGDRALRRVS*QGECGS
Trigger: AGAGCCACACTCACCTTGTCAGGAGACTCTTCTCAA...AGCCCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR GCA 90 bp CGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGGATGAAAAAGGCACCTaGGCCGTATGGACCATGTTG +
Preference number: 4 (lower is better)
Translates to: RPCTGENHPCKVSVVAPVDEKGT*AVWTML
Trigger: CAACATGGTCCATACGGCGCAGGTGCCTTTTTCATC...CACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000221943.14
ENST00000301183.15
CDS-3UTR GCA 90 bp GGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACGATGAAAAAGGCACCTaGGCCGTATGGACCATGTTG +
Preference number: 4 (lower is better)
Translates to: GELPDIPCSPLRSHVSGDDEKGT*AVWTML
Trigger: CAACATGGTCCATACGGCGCAGGTGCCTTTTTCATC...GTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR GCA 90 bp TACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCTGGATGAAAAAGGCACCTaGGCCGTATGGACCATGTTG +
Preference number: 4 (lower is better)
Translates to: YWELTLSPVIGQHHSPTLDEKGT*AVWTML
Trigger: CAACATGGTCCATACGGCGCAGGTGCCTTTTTCATC...CAGGGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR GCA 90 bp TGGCTCTCTGCGGCTACTAACAGCCTGAGCCTTTACCTCCCCAGGCCTGAACAGGTCTCGAAACTTGACTaGGCCTCCCTGCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: WLSAATNSLSLYLPRPEQVSKLD*ASLLQD
Trigger: ATCCTGAAGCAGGGAGGCGCAGTCAAGTTTCGAGAC...CTGTTCAGGCCTGGGGAGGTAAAGGCTCAGGCTGTTAGTAGCCGCAGAGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000589970.5
CDS-3UTR GCA 90 bp TGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGTCTCGAAACTTGACTaGGCCTCCCTGCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: CGELPDIPCSPLRSHVSGVSKLD*ASLLQD
Trigger: ATCCTGAAGCAGGGAGGCGCAGTCAAGTTTCGAGAC...CCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR GCA 90 bp TGGGCACAGCGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGTCTCGAAACTTGACTaGGCCTCCCTGCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: WAQRPCTGENHPCKVSVVVSKLD*ASLLQD
Trigger: ATCCTGAAGCAGGGAGGCGCAGTCAAGTTTCGAGAC...TACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCGCTGTGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000594660.5
CDS-3UTR GCA 90 bp GCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTACGTGGCAGCAGCGCTaGAGCGACAAGGACTGGAGC +
Preference number: 4 (lower is better)
Translates to: AVTFSQGQPGINTGNSRSTWQQR*SDKDWS
Trigger: GCTCCAGTCCTTGTCGCTGCAGCGCTGCTGCCACGT...AGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000417807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp GTGAAGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCGCTGTGTCCCGAGGCTaGTCCTCCGGCCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: VKTNGSQKCGELPDIPCSAVSRG*SSGPDF
Trigger: GAAGTCAGGGCCGGAGGAGCAGCCTCGGGACACAGC...GCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR GCA 90 bp CAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGCTACCAGACATTCCATaGAGCCCGCTGAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: QKCGELPDIPCSPLRSHVLPDIP*SPLRSH
Trigger: GTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAG...CACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR GCA 90 bp GGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCGGAAGCCACATGCACTaGGGCGTCCAGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GAVTFSQGQPGINTGNSRGSHMH*GVQRQK
Trigger: CTTCTGCCTCTGGACGCCGCAGTGCATGTGGCTTCC...GCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp AGGAATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCTGCTGACCGCCTGGTaGTTCAGGAGCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RNKYWELTLSPVIGQHHSLLTAW*FRSWVL
Trigger: CAGCACCCAGCTCCTGAAGCACCAGGCGGTCAGCAG...GGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp GCCTTTCCTCCTATAATGCCTGTTTGGTGCCCTCTACTGACAAAGCTTATCCCCCTGAGGGCTGGAGGGTaGCAAGGGCAGCTGCTGACC +
Preference number: 4 (lower is better)
Translates to: AFPPIMPVWCPLLTKLIPLRAGG*QGQLLT
Trigger: GGTCAGCAGCTGCCCTTGGCACCCTCCAGCCCTCAG...GGGGATAAGCTTTGTCAGTAGAGGGCACCAAACAGGCATTATAGGAGGAAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp TTGACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCCTCTTCTGATTGCCCTCTaGGGCCACTGCCGCACCCAG +
Preference number: 4 (lower is better)
Translates to: LTGNPFGVLGNVIPREVPLLIAL*GHCRTQ
Trigger: CTGGGTGCGGCAGTGGCCCCAGAGGGCAATCAGAAG...AGGCACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp CCCAGAGAGGTGCCTCAGTGGAGGCGCTGTGTCTCCTACGCAACTTCTGAGGGCATGGCCATACTTATCTaGCCTGATCCACTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: PREVPQWRRCVSYATSEGMAILI*PDPLLV
Trigger: GACAAGGAGTGGATCAGGCCAGATAAGTATGGCCAT...GCCCTCAGAAGTTGCGTAGGAGACACAGCGCCTCCACTGAGGCACCTCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp TGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCTGACGATGGCCATACTTATCTaGCCTGATCCACTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: WELTLSPVIGQHHSPTLTMAILI*PDPLLV
Trigger: GACAAGGAGTGGATCAGGCCAGATAAGTATGGCCAT...CGTCAGGGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp AATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCCAACGAGTCGGCCAGTaGGTAGAGGCGGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: NKYWELTLSPVIGQHHSPQRVGQ*VEAAET
Trigger: TGTCTCAGCCGCCTCTACCCACTGGCCGACTCGTTG...GGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000417807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp AATAAATCCATAACCAGCAATACTATGGGGCCTGGGGTGCGCTGGCCTTTAGTGAGCCTGCGGAGGTTCTaGAGGTGGTGGAGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: NKSITSNTMGPGVRWPLVSLRRF*RWWRQA
Trigger: CGCCTGCCTCCACCACCTCCAGAACCTCCGCAGGCT...CACTAAAGGCCAGCGCACCCCAGGCCCCATAGTATTGCTGGTTATGGATTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221943.14
ENST00000592922.6
CDS-3UTR CCA 90 bp CCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCACCACAACCTCGCAATTaGGCAGCATCTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: PCTGENHPCKVSVVAPVSPQPRN*AASPPP
Trigger: TGGTGGAGGAGATGCTGCCCAATTGCGAGGTTGTGG...TGACACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GTCAATAAATCCATAACCAGCAATACTATGGGGCCTGGGGTGCGCTGGCCTTTAAGGCAGGGACAGGGCTaGCTGTGTCCCGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VNKSITSNTMGPGVRWPLRQGQG*LCPEAA
Trigger: AGCAGCCTCGGGACACAGCCAGCCCTGTCCCTGCCT...TAAAGGCCAGCGCACCCCAGGCCCCATAGTATTGCTGGTTATGGATTTATTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp ACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCCTCAGGCTCTCTCCTGTGATTaGCCAGCACCACTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: TGNPFGVLGNVIPREVPQALSCD*PAPLPH
Trigger: GTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGC...CTGAGGCACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GTGAAGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCTGCATGTCCTGCAGTaGGCACAGCGGCCCTGCACG +
Preference number: 4 (lower is better)
Translates to: VKTNGSQKCGELPDIPCSLHVLQ*AQRPCT
Trigger: CGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAG...GCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp AATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCTCAGGAGCTGGGTGCTaGGGAAGCCACATGCACTGC +
Preference number: 4 (lower is better)
Translates to: NKYWELTLSPVIGQHHSPSGAGC*GSHMHC
Trigger: GCAGTGCATGTGGCTTCCCCAGCACCCAGCTCCTGA...GGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTCAGCTGCTGACCGCCTaGTGCTTCAGGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: DRVTGAVTFSQGQPGINTQLLTA*CFRSWV
Trigger: CACCCAGCTCCTGAAGCACCAGGCGGTCAGCAGCTG...AGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp GTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTCTCGGCGATGGATGCCCCTaGTACGCCCATTCCACATGG +
Preference number: 4 (lower is better)
Translates to: VTFSQGQPGINTGNSRSLGDGCP*YAHSTW
Trigger: CCATGTGGAATGGGCGTATCAGGGGCATCCATCGCC...GAGAGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp CAGCGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTCATACTTATCTGGCCTaGTCCACTCCTTGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: QRPCTGENHPCKVSVVAPHTYLA*STPCLE
Trigger: TTCGAGACAAGGAGTGGATCAGGCCAGATAAGTATG...AGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR TCA 90 bp CTCCCCACTTCCTCTCCTGCATCTGGGTTAGGTGGGAGAGGTGCCTGGGCATGTCATACTTATCTGGCCTaGTCCACTCCTTGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: LPTSSPASGLGGRGAWACHTYLA*STPCLE
Trigger: TTCGAGACAAGGAGTGGATCAGGCCAGATAAGTATG...ACATGCCCAGGCACCTCTCCCACCTAACCCAGATGCAGGAGAGGAAGTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR TCA 90 bp GTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCAAAATTCCAGAACTCCTaGGAGAAATGGCCATACTTA +
Preference number: 4 (lower is better)
Translates to: VEWGEGCCMSCSGHSGPAKFQNS*EKWPYL
Trigger: TAAGTATGGCCATTTCTCTCAGGAGTTCTGGAATTT...TGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR TCA 90 bp AATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCCCACCAATATCTGAGTaGGGCCAGGGTTGGACACGG +
Preference number: 4 (lower is better)
Translates to: NKYWELTLSPVIGQHHSPPPISE*GQGWTR
Trigger: CCGTGTCCAACCCTGGCCTCACTCAGATATTGGTGG...GGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp TGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGAAGCCAGAAGTGTGGTaGGCTACCAGACATTCCATG +
Preference number: 4 (lower is better)
Translates to: CGELPDIPCSPLRSHVSGKPEVW*ATRHSM
Trigger: CATGGAATGTCTGGTAGCTCACCACACTTCTGGCTT...CCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp ATTGACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCCTCACGCTCTCTCCTGTaGTTGGCCAGCACCACTCCC +
Preference number: 4 (lower is better)
Translates to: IDWKSIWGAGERYSQRGASRSLL*LASTTP
Trigger: GGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGA...GGCACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp AGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCAGTCTCCTGACAAGGTaGGTGTGGCTCTCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: RQMEARSVVSYQTFHAARSLLTR*VWLSAA
Trigger: AGCCGCAGAGAGCCACACTCACCTTGTCAGGAGACT...GCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp CTTCTGAGGGCTGGAGGGTGCCAAGGGCAGCTGCTGACCGCCTGGTGCTTCAGGAAAATGCTTCTGAATTaGCTGGAAATCCATTTGGGG +
Preference number: 4 (lower is better)
Translates to: LLRAGGCQGQLLTAWCFRKMLLN*LEIHLG
Trigger: CCCCAAATGGATTTCCAGTCAATTCAGAAGCATTTT...CCTGAAGCACCAGGCGGTCAGCAGCTGCCCTTGGCACCCTCCAGCCCTCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp AAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCTTTTCTTCTTCTGATTaGCCTCTGGGGCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: KYWELTLSPVIGQHHSPTFSSSD*PLGPLP
Trigger: CGGCAGTGGCCCCAGAGGGCAATCAGAAGAAGAAAA...GGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR GCA 90 bp CAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGGTCTCGAAACTTGACTaGGCCTCCCTGCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: QKCGELPDIPCSPLRSHVVSKLD*ASLLQD
Trigger: ATCCTGAAGCAGGGAGGCGCAGTCAAGTTTCGAGAC...CACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR GCA 90 bp GTGAAGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCACGTGGCAGCAGCGCTaGAGCGACAAGGACTGGAGC +
Preference number: 4 (lower is better)
Translates to: VKTNGSQKCGELPDIPCSTWQQR*SDKDWS
Trigger: GCTCCAGTCCTTGTCGCTGCAGCGCTGCTGCCACGT...GCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000417807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp AAGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCCGAGATGTCCAGCCTaGGGAGGTTCTGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: KTNGSQKCGELPDIPCSPPRCPA*GGSGGG
Trigger: ACCACCTCCAGAACCTCCGCAGGCTGGACATCTCGG...CGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000417807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp TCTAGGTTTGTGATGGATGCAGGGGGATATGAGAACTGCCTAACATTGCCCCTCGTTAGGTGGGAGAGGTaGCTGGGCATGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SRFVMDAGGYENCLTLPLVRWER*LGMWPS
Trigger: GCTGGGCCACATGCCCAGGCACCTCTCCCACCTAAC...GAGGGGCAATGTTAGGCAGTTCTCATATCCCCCTGCATCCATCACAAACCTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR GCA 90 bp CAGGCGGAGGAGGTTATCCAGGCCCTCGTAGTTGATGTCACAGTCACCGGCATCCAGCTCCTGCTGTTCTaGAACAGCGTCGATATCACA +
Preference number: 4 (lower is better)
Translates to: QAEEVIQALVVDVTVTGIQLLLF*NSVDIT
Trigger: TGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTG...GATGCCGGTGACTGTGACATCAACTACGAGGGCCTGGATAACCTCCTCCGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594339.1
CDS-3UTR CCA 90 bp TGCAAATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATCACACAGCCGCACCCAGGCGATaGATGCCCCTGATACGCCCA +
Preference number: 4 (lower is better)
Translates to: CKYATPAPAVLQQRRYHTAAPRR*MPLIRP
Trigger: TGGGCGTATCAGGGGCATCCATCGCCTGGGTGCGGC...TGTGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590641.6
CDS-3UTR CCA 90 bp TGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATCACACAGTTTTGACCTTCTGATTGCCCTCTaGGGCCACTGCCGCACCCAG +
Preference number: 4 (lower is better)
Translates to: CNSSSCCSATASISHSFDLLIAL*GHCRTQ
Trigger: CTGGGTGCGGCAGTGGCCCCAGAGGGCAATCAGAAG...GTCAAAACTGTGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590641.6
CDS-3UTR CCA 90 bp ACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCCTCAGGGCACCTGCGCCGTATaGACCATGTTGCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TGNPFGVLGNVIPREVPQGTCAV*TMLLLQ
Trigger: CTGGAGAAGCAACATGGTCCATACGGCGCAGGTGCC...CTGAGGCACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221943.14
CDS-3UTR CCA 90 bp CAGCGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTATGGCCATACTTATCTaGCCTGATCCACTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: QRPCTGENHPCKVSVVAPMAILI*PDPLLV
Trigger: GACAAGGAGTGGATCAGGCCAGATAAGTATGGCCAT...AGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR CCA 90 bp CGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGATGGCCATACTTATCTaGCCTGATCCACTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: RPCTGENHPCKVSVVAPVMAILI*PDPLLV
Trigger: GACAAGGAGTGGATCAGGCCAGATAAGTATGGCCAT...CACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR CCA 90 bp AAATCCATAACCAGCAATACTATGGGGCCTGGGGTGCGCTGGCCTTTAGTGAGTGCTCTCTCCTGTGATTaGCCAGCACCACTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: KSITSNTMGPGVRWPLVSALSCD*PAPLPH
Trigger: GTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGC...ACTCACTAAAGGCCAGCGCACCCCAGGCCCCATAGTATTGCTGGTTATGGATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGCTCTCTCCTGTGATTaGCCAGCACCACTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: DRVTGAVTFSQGQPGINTALSCD*PAPLPH
Trigger: GTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGC...AGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp TTGACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCCTTCAGGAGCTGGGTGCTaGGGAAGCCACATGCACTGC +
Preference number: 4 (lower is better)
Translates to: LTGNPFGVLGNVIPREVPSGAGC*GSHMHC
Trigger: GCAGTGCATGTGGCTTCCCCAGCACCCAGCTCCTGA...AGGCACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp AGGAATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCGCAACTTCTGAGGGCTaGAGGGTGCCAAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RNKYWELTLSPVIGQHHSATSEG*RVPRAA
Trigger: AGCTGCCCTTGGCACCCTCCAGCCCTCAGAAGTTGC...GGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTCTCGCAACTTCTGAGGGCTaGAGGGTGCCAAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: VTFSQGQPGINTGNSRSLATSEG*RVPRAA
Trigger: AGCTGCCCTTGGCACCCTCCAGCCCTCAGAAGTTGC...GAGAGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp AAATCCATAACCAGCAATACTATGGGGCCTGGGGTGCGCTGGCCTTTAGTGAGTCTCCCTGCTTCAGGATaGAAAAGGCACCTGCGCCGT +
Preference number: 4 (lower is better)
Translates to: KSITSNTMGPGVRWPLVSLPASG*KRHLRR
Trigger: ACGGCGCAGGTGCCTTTTTCATCCTGAAGCAGGGAG...ACTCACTAAAGGCCAGCGCACCCCAGGCCCCATAGTATTGCTGGTTATGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000221943.14
CDS-3UTR TCA 90 bp AGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCCCTTGTCTCGAAACTTaGCTGCGCCTCCCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RQMEARSVVSYQTFHAARPCLET*LRLPAS
Trigger: TGAAGCAGGGAGGCGCAGTCAAGTTTCGAGACAAGG...GCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR TCA 90 bp TGGAAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCATACTTATCTGGCCTaGTCCACTCCTTGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: WKGLPDRVTGAVTFSQGQHTYLA*STPCLE
Trigger: TTCGAGACAAGGAGTGGATCAGGCCAGATAAGTATG...CTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp AAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCACATACTTATCTGGCCTaGTCCACTCCTTGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: KGLPDRVTGAVTFSQGQPHTYLA*STPCLE
Trigger: TTCGAGACAAGGAGTGGATCAGGCCAGATAAGTATG...TGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp GTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTCTCCCAGGCCCTCGTAGTTaGTGTCACAGTCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: VTFSQGQPGINTGNSRSLPGPRS*CHSHRH
Trigger: ATGCCGGTGACTGTGACATCAACTACGAGGGCCTGG...GAGAGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp TTGCAAATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATCACACGTGGGTAGAGGCGGCTaGGACACCAGTCGTCCACGT +
Preference number: 4 (lower is better)
Translates to: LQICNSSSCCSATASISHVGRGG*DTSRPR
Trigger: ACGTGGACGACTGGTGTCTCAGCCGCCTCTACCCAC...GTGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR TCA 90 bp GACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTCCACCAATATCTGAGTaGGGCCAGGGTTGGACACGG +
Preference number: 4 (lower is better)
Translates to: DRVTGAVTFSQGQPGINTPPISE*GQGWTR
Trigger: CCGTGTCCAACCCTGGCCTCACTCAGATATTGGTGG...AGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp AAGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCCACCAATATCTGAGTaGGGCCAGGGTTGGACACGG +
Preference number: 4 (lower is better)
Translates to: KTNGSQKCGELPDIPCSPPPISE*GQGWTR
Trigger: CCGTGTCCAACCCTGGCCTCACTCAGATATTGGTGG...CGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp GAATTGACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCGGCTACTAACAGCCTaGGCCTTTACCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ELTGNPFGVLGNVIPREVRLLTA*AFTSPG
Trigger: GCCTGGGGAGGTAAAGGCTCAGGCTGTTAGTAGCCG...CACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGTCAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp AATAAATCCATAACCAGCAATACTATGGGGCCTGGGGTGCGCTGGCCTTTAGTGCTCCTACGCAACTTCTaGGGGCTGGAGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: NKSITSNTMGPGVRWPLVLLRNF*GLEGAK
Trigger: CTTGGCACCCTCCAGCCCTCAGAAGTTGCGTAGGAG...CACTAAAGGCCAGCGCACCCCAGGCCCCATAGTATTGCTGGTTATGGATTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp AAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTTTTTCTTCTTCTGATTaGCCTCTGGGGCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: KCGELPDIPCSPLRSHVSFSSSD*PLGPLP
Trigger: CGGCAGTGGCCCCAGAGGGCAATCAGAAGAAGAAAA...ACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR GCA 90 bp CCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCATTGACTGCGCCTCCCTaGTTCAGGATGAAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: PCTGENHPCKVSVVAPVSLTAPP*FRMKKA
Trigger: TGCCTTTTTCATCCTGAAGCAGGGAGGCGCAGTCAA...TGACACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000594660.5
CDS-3UTR GCA 90 bp CAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGTTGACTGCGCCTCCCTaGTTCAGGATGAAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: QKCGELPDIPCSPLRSHVLTAPP*FRMKKA
Trigger: TGCCTTTTTCATCCTGAAGCAGGGAGGCGCAGTCAA...CACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR GCA 90 bp AATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCCTACCAGACATTCCATaGAGCCCGCTGAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: NKYWELTLSPVIGQHHSPLPDIP*SPLRSH
Trigger: GTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAG...GGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp GTGTTAATTGCAAATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATGCCGCACCCAGGCGATaGATGCCCCTGATACGCCCA +
Preference number: 4 (lower is better)
Translates to: VLIANMQLQLLLFCNSVDAAPRR*MPLIRP
Trigger: TGGGCGTATCAGGGGCATCCATCGCCTGGGTGCGGC...ATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCAATTAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000597457.5
CDS-3UTR CCA 90 bp TCCCTGCAAGAAATGGCAGTGCACTCACATAAGGACAGTTTGAGAAGAGTCTCCCTTCTGATTGCCCTCTaGGGCCACTGCCGCACCCAG +
Preference number: 4 (lower is better)
Translates to: SLQEMAVHSHKDSLRRVSLLIAL*GHCRTQ
Trigger: CTGGGTGCGGCAGTGGCCCCAGAGGGCAATCAGAAG...GGAGACTCTTCTCAAACTGTCCTTATGTGAGTGCACTGCCATTTCTTGCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp TGGGCACAGCGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAATGGCCATACTTATCTaGCCTGATCCACTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: WAQRPCTGENHPCKVSVVMAILI*PDPLLV
Trigger: GACAAGGAGTGGATCAGGCCAGATAAGTATGGCCAT...TACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCGCTGTGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
ENST00000594660.5
CDS-3UTR CCA 90 bp GTGAAGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCAACGAGTCGGCCAGTaGGTAGAGGCGGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: VKTNGSQKCGELPDIPCSQRVGQ*VEAAET
Trigger: TGTCTCAGCCGCCTCTACCCACTGGCCGACTCGTTG...GCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000417807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp AGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCCCACAACCTCGCAATTaGGCAGCATCTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RQMEARSVVSYQTFHAARPQPRN*AASPPP
Trigger: TGGTGGAGGAGATGCTGCCCAATTGCGAGGTTGTGG...GCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp AGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCCTGGCCTTTAGTGAGTaGAGTGGGGCGAAGGATGCT +
Preference number: 4 (lower is better)
Translates to: RQMEARSVVSYQTFHAARLAFSE*SGAKDA
Trigger: AGCATCCTTCGCCCCACTCCACTCACTAAAGGCCAG...GCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp TCAGGGTCCCTGCAAGAAATGGCAGTGCACTCACATAAGGACAGTTTGAGAAGAGGCGATGGATGCCCCTaGTACGCCCATTCCACATGG +
Preference number: 4 (lower is better)
Translates to: SGSLQEMAVHSHKDSLRRGDGCP*YAHSTW
Trigger: CCATGTGGAATGGGCGTATCAGGGGCATCCATCGCC...TCTTCTCAAACTGTCCTTATGTGAGTGCACTGCCATTTCTTGCAGGGACCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp AAGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCCTTGTCTCGAAACTTaGCTGCGCCTCCCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: KTNGSQKCGELPDIPCSPPCLET*LRLPAS
Trigger: TGAAGCAGGGAGGCGCAGTCAAGTTTCGAGACAAGG...CGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR TCA 90 bp GGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCAGTCAGGGTCCACCCTGACGTTGAGTaGAGACAAATGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GENHPCKVSVVAPVSVRVHPDVE*RQMEAR
Trigger: TCTGGCTTCCATTTGTCTTCACTCAACGTCAGGGTG...GACCCTGACTGACACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp TCAGGGTCCCTGCAAGAAATGGCAGTGCACTCACATAAGGACAGTTTGAGAAGATCACGCTCTCTCCTGTaGTTGGCCAGCACCACTCCC +
Preference number: 4 (lower is better)
Translates to: SGSLQEMAVHSHKDSLRRSRSLL*LASTTP
Trigger: GGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGA...TCTTCTCAAACTGTCCTTATGTGAGTGCACTGCCATTTCTTGCAGGGACCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp TCCCTGCAAGAAATGGCAGTGCACTCACATAAGGACAGTTTGAGAAGAGTCTCCTTACCTCCCCAGGCCTaGACAGGGGCATGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SLQEMAVHSHKDSLRRVSLPPQA*TGAWKG
Trigger: CCCTTTCCATGCCCCTGTTCAGGCCTGGGGAGGTAA...GGAGACTCTTCTCAAACTGTCCTTATGTGAGTGCACTGCCATTTCTTGCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp CAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGTTTGGTGCCCTCTACTaGCAAAGCTTATCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: QKCGELPDIPCSPLRSHVFGALY*QSLSPF
Trigger: GAAAGGGGATAAGCTTTGTCAGTAGAGGGCACCAAA...CACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp GGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTTTTCTTCTTCTGATTaGCCTCTGGGGCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: GAVTFSQGQPGINTGNSRFSSSD*PLGPLP
Trigger: CGGCAGTGGCCCCAGAGGGCAATCAGAAGAAGAAAA...GCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR GCA 90 bp ATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATCACACAGTTTTACGTGGCAGCAGCGCTaGAGCGACAAGGACTGGAGC +
Preference number: 4 (lower is better)
Translates to: ICNSSSCCSATASISHSFTWQQR*SDKDWS
Trigger: GCTCCAGTCCTTGTCGCTGCAGCGCTGCTGCCACGT...AAAACTGTGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR GCA 90 bp GACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTCTACCAGACATTCCATaGAGCCCGCTGAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: DRVTGAVTFSQGQPGINTLPDIP*SPLRSH
Trigger: GTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAG...AGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR GCA 90 bp TCCCTGCAAGAAATGGCAGTGCACTCACATAAGGACAGTTTGAGAAGAGTCTCCTGGGGCGAAGGATGCTaGATGTCCTGCAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SLQEMAVHSHKDSLRRVSWGEGC*MSCSGH
Trigger: GTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCA...GGAGACTCTTCTCAAACTGTCCTTATGTGAGTGCACTGCCATTTCTTGCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp GAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGATAATGCCTGTTTGGTaGCCTCTACTGACAAAGCTT +
Preference number: 4 (lower is better)
Translates to: ELPDIPCSPLRSHVSGDRIMPVW*PLLTKL
Trigger: AAGCTTTGTCAGTAGAGGGCACCAAACAGGCATTAT...CCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp CCCAGAGAGGTGCCTCAGTGGAGGCGCTGTGTCTCCTACGCAACTTCTGAGGGCAACCGATTTTTCTCATaGACCTTGTACATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PREVPQWRRCVSYATSEGNRFFS*TLYISL
Trigger: AAGGGAGATGTACAAGGTGCATGAGAAAAATCGGTT...GCCCTCAGAAGTTGCGTAGGAGACACAGCGCCTCCACTGAGGCACCTCTCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp GGAGGCGCCTTTCCTCCTATAATGCCTGTTTGGTGCCCTCTACTGACAAAGCTTCCACAACCTCGCAATTaGGCAGCATCTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: GGAFPPIMPVWCPLLTKLPQPRN*AASPPP
Trigger: TGGTGGAGGAGATGCTGCCCAATTGCGAGGTTGTGG...AAGCTTTGTCAGTAGAGGGCACCAAACAGGCATTATAGGAGGAAAGGCGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp GCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTGTCCTTTTCTTCTTCTaGTTGCCCTCTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: AVTFSQGQPGINTGNSRSVLFFF*LPSGAT
Trigger: AGTGGCCCCAGAGGGCAATCAGAAGAAGAAAAGGAC...AGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp ATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTGCAAATATGCAACTCCAGTGGGTAGAGGCGGCTaGGACACCAGTCGTCCACGT +
Preference number: 4 (lower is better)
Translates to: IAVQAHEAHCVNCKYATPVGRGG*DTSRPR
Trigger: ACGTGGACGACTGGTGTCTCAGCCGCCTCTACCCAC...TGGAGTTGCATATTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR TCA 90 bp AGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCCACCCTGACGTTGAGTaGAGACAAATGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RQMEARSVVSYQTFHAARHPDVE*RQMEAR
Trigger: TCTGGCTTCCATTTGTCTTCACTCAACGTCAGGGTG...GCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp GACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGGCTAAAGGCAAAATGCTTCTGAATTaGCTGGAAATCCATTTGGGG +
Preference number: 4 (lower is better)
Translates to: DIPCSPLRSHVSGDRAKGKMLLN*LEIHLG
Trigger: CCCCAAATGGATTTCCAGTCAATTCAGAAGCATTTT...GCCTTTAGCCCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438807.7
CDS-3UTR GCA 90 bp AGGAATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCTTTTCTTCTTCTGATTaGCCTCTGGGGCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: RNKYWELTLSPVIGQHHSFSSSD*PLGPLP
Trigger: CGGCAGTGGCCCCAGAGGGCAATCAGAAGAAGAAAA...GGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR GCA 90 bp GCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTTTTTCTTCTTCTGATTaGCCTCTGGGGCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: AVTFSQGQPGINTGNSRSFSSSD*PLGPLP
Trigger: CGGCAGTGGCCCCAGAGGGCAATCAGAAGAAGAAAA...AGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR GCA 90 bp GGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTTGACTGCGCCTCCCTaGTTCAGGATGAAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: GAVTFSQGQPGINTGNSRLTAPP*FRMKKA
Trigger: TGCCTTTTTCATCCTGAAGCAGGGAGGCGCAGTCAA...GCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR GCA 90 bp GTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTCTCGTCTCGAAACTTGACTaGGCCTCCCTGCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: VTFSQGQPGINTGNSRSLVSKLD*ASLLQD
Trigger: ATCCTGAAGCAGGGAGGCGCAGTCAAGTTTCGAGAC...GAGAGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR GCA 90 bp AAAACCAGGAGTCATTTAATTCTTCCAGAGACTCACTGTGACTGCTCATCTACCGCCAGCGAGAGCTCCTaGAACGAGTCGGCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KTRSHLILPETHCDCSSTASESS*NESASG
Trigger: CCCACTGGCCGACTCGTTGCAGGAGCTCTCGCTGGC...GGTAGATGAGCAGTCACAGTGAGTCTCTGGAAGAATTAAATGACTCCTGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR GCA 90 bp GCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTGTCAGTCAGGGTCCCTaGAAGAAATGGCAGTGCACT +
Preference number: 4 (lower is better)
Translates to: AVTFSQGQPGINTGNSRSVSQGP*KKWQCT
Trigger: AGTGCACTGCCATTTCTTGCAGGGACCCTGACTGAC...AGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR GCA 90 bp TCAGGGTCCCTGCAAGAAATGGCAGTGCACTCACATAAGGACAGTTTGAGAAGACCGAGATGTCCAGCCTaGGGAGGTTCGGAGGTTATC +
Preference number: 4 (lower is better)
Translates to: SGSLQEMAVHSHKDSLRRPRCPA*GGSEVI
Trigger: GATAACCTCCGAACCTCCGCAGGCTGGACATCTCGG...TCTTCTCAAACTGTCCTTATGTGAGTGCACTGCCATTTCTTGCAGGGACCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
CDS-3UTR GCA 90 bp CTCCCCACTTCCTCTCCTGCATCTGGGTTAGGTGGGAGAGGTGCCTGGGCATGTGAGACTCACTGTGACTaGTCATCTACCATAAATACT +
Preference number: 4 (lower is better)
Translates to: LPTSSPASGLGGRGAWACETHCD*SSTINT
Trigger: AGTATTTATGGTAGATGAGCAGTCACAGTGAGTCTC...ACATGCCCAGGCACCTCTCCCACCTAACCCAGATGCAGGAGAGGAAGTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR CCA 90 bp TCCCTGCAAGAAATGGCAGTGCACTCACATAAGGACAGTTTGAGAAGAGTCTCCGGCACCTGCGCCGTATaGACCATGTTGCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLQEMAVHSHKDSLRRVSGTCAV*TMLLLQ
Trigger: CTGGAGAAGCAACATGGTCCATACGGCGCAGGTGCC...GGAGACTCTTCTCAAACTGTCCTTATGTGAGTGCACTGCCATTTCTTGCAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000589970.5
CDS-3UTR CCA 90 bp ATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATCACACAGTTTTTGCAGCGACAAGGACTaGAGCTCCTTCAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: ICNSSSCCSATASISHSFCSDKD*SSFRRR
Trigger: CCTCCGCCTGAAGGAGCTCCAGTCCTTGTCGCTGCA...AAAACTGTGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR CCA 90 bp ACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATCACACAGTTTTGACTAAACAACGAGTCGGCCAGTaGGTAGAGGCGGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: TPAPAVLQQRRYHTVLTKQRVGQ*VEAAET
Trigger: TGTCTCAGCCGCCTCTACCCACTGGCCGACTCGTTG...TTTAGTCAAAACTGTGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR CCA 90 bp CGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGGCTTTAACAGTGAACTaGAATAATGAGGGCTTCACT +
Preference number: 4 (lower is better)
Translates to: RPCTGENHPCKVSVVAPVALTVN*NNEGFT
Trigger: AGTGAAGCCCTCATTATTCCAGTTCACTGTTAAAGC...CACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp AATAAATCCATAACCAGCAATACTATGGGGCCTGGGGTGCGCTGGCCTTTAGTGGTCCTTTTCTTCTTCTaGTTGCCCTCTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: NKSITSNTMGPGVRWPLVVLFFF*LPSGAT
Trigger: AGTGGCCCCAGAGGGCAATCAGAAGAAGAAAAGGAC...CACTAAAGGCCAGCGCACCCCAGGCCCCATAGTATTGCTGGTTATGGATTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp TGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGAAATTCCAGAACTCCTaGGAGAAATGGCCATACTTA +
Preference number: 4 (lower is better)
Translates to: CGELPDIPCSPLRSHVSGKFQNS*EKWPYL
Trigger: TAAGTATGGCCATTTCTCTCAGGAGTTCTGGAATTT...CCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp TGGAAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGAAATTCCAGAACTCCTaGGAGAAATGGCCATACTTA +
Preference number: 4 (lower is better)
Translates to: WKGLPDRVTGAVTFSQGQKFQNS*EKWPYL
Trigger: TAAGTATGGCCATTTCTCTCAGGAGTTCTGGAATTT...CTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp TGTGTTAATTGCAAATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGACCAGGCCCTCGTAGTTaGTGTCACAGTCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: CVNCKYATPAPAVLQQRRPGPRS*CHSHRH
Trigger: ATGCCGGTGACTGTGACATCAACTACGAGGGCCTGG...TCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCAATTAACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590641.6
ENST00000594339.1
ENST00000597457.5
CDS-3UTR TCA 90 bp GCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTAAGCCAGAAGTGTGGTaGGCTACCAGACATTCCATG +
Preference number: 4 (lower is better)
Translates to: AVTFSQGQPGINTGNSRSKPEVW*ATRHSM
Trigger: CATGGAATGTCTGGTAGCTCACCACACTTCTGGCTT...AGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp GTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTCTCAAGCCAGAAGTGTGGTaGGCTACCAGACATTCCATG +
Preference number: 4 (lower is better)
Translates to: VTFSQGQPGINTGNSRSLKPEVW*ATRHSM
Trigger: CATGGAATGTCTGGTAGCTCACCACACTTCTGGCTT...GAGAGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp GGAGGCGCCTTTCCTCCTATAATGCCTGTTTGGTGCCCTCTACTGACAAAGCTTTTGAGAAGAGTCTCCTaGCAAGGTGAGTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GGAFPPIMPVWCPLLTKLLRRVS*QGECGS
Trigger: AGAGCCACACTCACCTTGTCAGGAGACTCTTCTCAA...AAGCTTTGTCAGTAGAGGGCACCAAACAGGCATTATAGGAGGAAAGGCGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp AGGAATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCTTGAGAAGAGTCTCCTaGCAAGGTGAGTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RNKYWELTLSPVIGQHHSLRRVS*QGECGS
Trigger: AGAGCCACACTCACCTTGTCAGGAGACTCTTCTCAA...GGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp GCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTTTGAGAAGAGTCTCCTaGCAAGGTGAGTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: AVTFSQGQPGINTGNSRSLRRVS*QGECGS
Trigger: AGAGCCACACTCACCTTGTCAGGAGACTCTTCTCAA...AGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp GGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCAGTCAGGGTCCACATAAGGACAGTTTaGGAAGAGTCTCCTGACAAG +
Preference number: 4 (lower is better)
Translates to: GENHPCKVSVVAPVSVRVHIRTV*EESPDK
Trigger: CTTGTCAGGAGACTCTTCTCAAACTGTCCTTATGTG...GACCCTGACTGACACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp AAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGATCGATTTTTCTCATaGACCTTGTACATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: KGLPDRVTGAVTFSQGQPDRFFS*TLYISL
Trigger: AAGGGAGATGTACAAGGTGCATGAGAAAAATCGATC...TGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR GCA 90 bp GCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTTTGACTGCGCCTCCCTaGTTCAGGATGAAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: AVTFSQGQPGINTGNSRSLTAPP*FRMKKA
Trigger: TGCCTTTTTCATCCTGAAGCAGGGAGGCGCAGTCAA...AGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR GCA 90 bp TTGCAAATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATCACACTGCAACTCCAGCTCCTaGTGTTCTGCAACAGCGTCG +
Preference number: 4 (lower is better)
Translates to: LQICNSSSCCSATASISHCNSSS*CSATAS
Trigger: CGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCA...GTGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR CCA 90 bp AAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGCTTTAACAGTGAACTaGAATAATGAGGGCTTCACT +
Preference number: 4 (lower is better)
Translates to: KGLPDRVTGAVTFSQGQPALTVN*NNEGFT
Trigger: AGTGAAGCCCTCATTATTCCAGTTCACTGTTAAAGC...TGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CCA 90 bp ATCTTTATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTGCAAATATGCATCTCACTGGAGGTGGTaGAGGCAGGCGAGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: IFIAVQAHEAHCVNCKYASHWRW*RQARPR
Trigger: ACGGGGCCTCGCCTGCCTCCACCACCTCCAGTGAGA...TGCATATTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTATAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR CCA 90 bp ATTGCAAATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATCACATGCATCTGGGTTAGGTaGGAGAGGTGCCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: IANMQLQLLLFCNSVDITCIWVR*ERCLGM
Trigger: CATGCCCAGGCACCTCTCCCACCTAACCCAGATGCA...TGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR TCA 90 bp TCAGGGTCCCTGCAAGAAATGGCAGTGCACTCACATAAGGACAGTTTGAGAAGAGTCCTTTTCTTCTTCTaGTTGCCCTCTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: SGSLQEMAVHSHKDSLRRVLFFF*LPSGAT
Trigger: AGTGGCCCCAGAGGGCAATCAGAAGAAGAAAAGGAC...TCTTCTCAAACTGTCCTTATGTGAGTGCACTGCCATTTCTTGCAGGGACCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp GTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTCTCCATACTTATCTGGCCTaGTCCACTCCTTGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: VTFSQGQPGINTGNSRSLHTYLA*STPCLE
Trigger: TTCGAGACAAGGAGTGGATCAGGCCAGATAAGTATG...GAGAGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp TTGACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCCTCATACTTATCTGGCCTaGTCCACTCCTTGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: LTGNPFGVLGNVIPREVPHTYLA*STPCLE
Trigger: TTCGAGACAAGGAGTGGATCAGGCCAGATAAGTATG...AGGCACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp ACCGGCATCCACAGCTTCGACAGGCACTTCACAGAAATTCCAGAACTCCTGAGACATACTTATCTGGCCTaGTCCACTCCTTGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: TGIHSFDRHFTEIPELLRHTYLA*STPCLE
Trigger: TTCGAGACAAGGAGTGGATCAGGCCAGATAAGTATG...TCTCAGGAGTTCTGGAATTTCTGTGAAGTGCCTGTCGAAGCTGTGGATGCCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594339.1
CDS-3UTR TCA 90 bp TCCTATAATGCCTGTTTGGTGCCCTCTACTGACAAAGCTTATCCCCTTTCAAAACGGCTACTAACAGCCTaGGCCTTTACCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SYNACLVPSTDKAYPLSKRLLTA*AFTSPG
Trigger: GCCTGGGGAGGTAAAGGCTCAGGCTGTTAGTAGCCG...TTTTGAAAGGGGATAAGCTTTGTCAGTAGAGGGCACCAAACAGGCATTATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp GGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCCACATAAGGACAGTTTaGGAAGAGTCTCCTGACAAG +
Preference number: 4 (lower is better)
Translates to: GAVTFSQGQPGINTGNSRHIRTV*EESPDK
Trigger: CTTGTCAGGAGACTCTTCTCAAACTGTCCTTATGTG...GCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp ATCTTTATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTGCAAATATGCACTTCTGATTGCCCTCTaGGGCCACTGCCGCACCCAG +
Preference number: 4 (lower is better)
Translates to: IFIAVQAHEAHCVNCKYALLIAL*GHCRTQ
Trigger: CTGGGTGCGGCAGTGGCCCCAGAGGGCAATCAGAAG...TGCATATTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTATAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000597457.5
CDS-3UTR CCA 90 bp GTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTCTCATGGCCATACTTATCTaGCCTGATCCACTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: VTFSQGQPGINTGNSRSLMAILI*PDPLLV
Trigger: GACAAGGAGTGGATCAGGCCAGATAAGTATGGCCAT...GAGAGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp AAGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGATGGCCATACTTATCTaGCCTGATCCACTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: KTNGSQKCGELPDIPCSPMAILI*PDPLLV
Trigger: GACAAGGAGTGGATCAGGCCAGATAAGTATGGCCAT...CGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CCA 90 bp ACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATCACACAGTTTTGACTAAATTCCTCTCCTGCATCTaGGTTAGGTGGGAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: TPAPAVLQQRRYHTVLTKFLSCI*VRWERC
Trigger: GCACCTCTCCCACCTAACCCAGATGCAGGAGAGGAA...TTTAGTCAAAACTGTGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR TCA 90 bp GTGAAGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCATACTTATCTGGCCTaGTCCACTCCTTGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: VKTNGSQKCGELPDIPCSHTYLA*STPCLE
Trigger: TTCGAGACAAGGAGTGGATCAGGCCAGATAAGTATG...GCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGCGTGCGTGCATGCGTGCATGTGTGTGTGTATAGGGAGGTACAAATTCCAGAACTCCTaGGAGAAATGGCCATACTTA +
Preference number: 4 (lower is better)
Translates to: VCVCACVHACMCVCIGRYKFQNS*EKWPYL
Trigger: TAAGTATGGCCATTTCTCTCAGGAGTTCTGGAATTT...GTACCTCCCTATACACACACACATGCACGCATGCACGCACGCACACACACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR TCA 90 bp TCCTATAATGCCTGTTTGGTGCCCTCTACTGACAAAGCTTATCCCCTTTCAAAACCACCAATATCTGAGTaGGGCCAGGGTTGGACACGG +
Preference number: 4 (lower is better)
Translates to: SYNACLVPSTDKAYPLSKPPISE*GQGWTR
Trigger: CCGTGTCCAACCCTGGCCTCACTCAGATATTGGTGG...TTTTGAAAGGGGATAAGCTTTGTCAGTAGAGGGCACCAAACAGGCATTATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp GTGAAGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCTTTGGTGCCCTCTACTaGCAAAGCTTATCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: VKTNGSQKCGELPDIPCSFGALY*QSLSPF
Trigger: GAAAGGGGATAAGCTTTGTCAGTAGAGGGCACCAAA...GCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp AAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTAAAATGCTTCTGAATTaGCTGGAAATCCATTTGGGG +
Preference number: 4 (lower is better)
Translates to: KCGELPDIPCSPLRSHVSKMLLN*LEIHLG
Trigger: CCCCAAATGGATTTCCAGTCAATTCAGAAGCATTTT...ACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTCACCACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp TCACAGTCACCGGCATCCACAGCTTCGACAGGCACTTCACAGAAATTCCAGAACTCCAGAGACTCACTGTaGCTGCTCATCTACCATAAA +
Preference number: 4 (lower is better)
Translates to: SQSPASTASTGTSQKFQNSRDSL*LLIYHK
Trigger: TTTATGGTAGATGAGCAGTCACAGTGAGTCTCTGGA...GTTCTGGAATTTCTGTGAAGTGCCTGTCGAAGCTGTGGATGCCGGTGACTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594339.1
CDS-3UTR GCA 90 bp GTGTTAATTGCAAATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATTTTTCTTCTTCTGATTaGCCTCTGGGGCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: VLIANMQLQLLLFCNSVDFSSSD*PLGPLP
Trigger: CGGCAGTGGCCCCAGAGGGCAATCAGAAGAAGAAAA...ATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCAATTAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000597457.5
CDS-3UTR GCA 90 bp TCCCTGCAAGAAATGGCAGTGCACTCACATAAGGACAGTTTGAGAAGAGTCTCCGATGAAAAAGGCACCTaGGCCGTATGGACCATGTTG +
Preference number: 4 (lower is better)
Translates to: SLQEMAVHSHKDSLRRVSDEKGT*AVWTML
Trigger: CAACATGGTCCATACGGCGCAGGTGCCTTTTTCATC...GGAGACTCTTCTCAAACTGTCCTTATGTGAGTGCACTGCCATTTCTTGCAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000589970.5
CDS-3UTR CCA 90 bp TGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATCACACAGTTTTGACATGGCCATACTTATCTaGCCTGATCCACTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: CNSSSCCSATASISHSFDMAILI*PDPLLV
Trigger: GACAAGGAGTGGATCAGGCCAGATAAGTATGGCCAT...GTCAAAACTGTGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR CCA 90 bp ATTCTTCCAGAGACTCACTGTGACTGCTCATCTACCATAAATACTCTAGGTTTGTGCAGCGACAAGGACTaGAGCTCCTTCAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: ILPETHCDCSSTINTLGLCSDKD*SSFRRR
Trigger: CCTCCGCCTGAAGGAGCTCCAGTCCTTGTCGCTGCA...CAAACCTAGAGTATTTATGGTAGATGAGCAGTCACAGTGAGTCTCTGGAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR CCA 90 bp TCCTATAATGCCTGTTTGGTGCCCTCTACTGACAAAGCTTATCCCCTTTCAAAATGGTGCTTCAGGAGCTaGGTGCTGGGGAAGCCACAT +
Preference number: 4 (lower is better)
Translates to: SYNACLVPSTDKAYPLSKWCFRS*VLGKPH
Trigger: ATGTGGCTTCCCCAGCACCCAGCTCCTGAAGCACCA...TTTTGAAAGGGGATAAGCTTTGTCAGTAGAGGGCACCAAACAGGCATTATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp CATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCAGTCAGGGTCCCTGCAAGAAAATTCCAGAACTCCTaGGAGAAATGGCCATACTTA +
Preference number: 4 (lower is better)
Translates to: HPCKVSVVAPVSVRVPARKFQNS*EKWPYL
Trigger: TAAGTATGGCCATTTCTCTCAGGAGTTCTGGAATTT...TCTTGCAGGGACCCTGACTGACACAGGGGCTACTACTGACACTTTACAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp CCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATAAATTCCAGAACTCCTaGGAGAAATGGCCATACTTA +
Preference number: 4 (lower is better)
Translates to: PDRVTGAVTFSQGQPGINKFQNS*EKWPYL
Trigger: TAAGTATGGCCATTTCTCTCAGGAGTTCTGGAATTT...ATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp GAATTGACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCACATAAGGACAGTTTaGGAAGAGTCTCCTGACAAG +
Preference number: 4 (lower is better)
Translates to: ELTGNPFGVLGNVIPREVHIRTV*EESPDK
Trigger: CTTGTCAGGAGACTCTTCTCAAACTGTCCTTATGTG...CACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGTCAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp GTGAAGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCACATAAGGACAGTTTaGGAAGAGTCTCCTGACAAG +
Preference number: 4 (lower is better)
Translates to: VKTNGSQKCGELPDIPCSHIRTV*EESPDK
Trigger: CTTGTCAGGAGACTCTTCTCAAACTGTCCTTATGTG...GCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp GCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATCACACAGTTTTGACTAATACTCTAGGTTTGTaGTGGATGCAGGGGGATATG +
Preference number: 4 (lower is better)
Translates to: ATPAPAVLQQRRYHTVLTNTLGL*WMQGDM
Trigger: CATATCCCCCTGCATCCATCACAAACCTAGAGTATT...AGTCAAAACTGTGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR GCA 90 bp ATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTGCAAATATGCAACTCCATTTTCTTCTTCTGATTaGCCTCTGGGGCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: IAVQAHEAHCVNCKYATPFSSSD*PLGPLP
Trigger: CGGCAGTGGCCCCAGAGGGCAATCAGAAGAAGAAAA...TGGAGTTGCATATTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000597457.5
CDS-3UTR GCA 90 bp CATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGTCAGTCAGGGTCCCTGCAAGAGATCGATTTTTCTCATaGACCTTGTACATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: HPCKVSVVAPVSVRVPARDRFFS*TLYISL
Trigger: AAGGGAGATGTACAAGGTGCATGAGAAAAATCGATC...TCTTGCAGGGACCCTGACTGACACAGGGGCTACTACTGACACTTTACAGGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221943.14
ENST00000301183.15
CDS-3UTR GCA 90 bp ATTGACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCCATAATGCCTGTTTGGTaGCCTCTACTGACAAAGCTT +
Preference number: 4 (lower is better)
Translates to: IDWKSIWGAGERYSQRGAIMPVW*PLLTKL
Trigger: AAGCTTTGTCAGTAGAGGGCACCAAACAGGCATTAT...GGCACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp AATAAAATCTTTATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTGCAAAGTTAGGTGGGAGAGGTaGCTGGGCATGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: NKIFIAVQAHEAHCVNCKVRWER*LGMWPS
Trigger: GCTGGGCCACATGCCCAGGCACCTCTCCCACCTAAC...TTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTATAAAGATTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR GCA 90 bp GTGTTAATTGCAAATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATCAGCTCCTGCTGTTCTaGAACAGCGTCGATATCACA +
Preference number: 4 (lower is better)
Translates to: VLIANMQLQLLLFCNSVDQLLLF*NSVDIT
Trigger: TGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTG...ATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCAATTAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590641.6
ENST00000594339.1
ENST00000597457.5
CDS-3UTR TCA 90 bp GTGTTAATTGCAAATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATCATACTTATCTGGCCTaGTCCACTCCTTGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: VLIANMQLQLLLFCNSVDHTYLA*STPCLE
Trigger: TTCGAGACAAGGAGTGGATCAGGCCAGATAAGTATG...ATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCAATTAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590641.6
ENST00000594339.1
ENST00000597457.5
CDS-3UTR TCA 90 bp AAATCCATAACCAGCAATACTATGGGGCCTGGGGTGCGCTGGCCTTTAGTGAGTAAATTCCAGAACTCCTaGGAGAAATGGCCATACTTA +
Preference number: 4 (lower is better)
Translates to: KSITSNTMGPGVRWPLVSKFQNS*EKWPYL
Trigger: TAAGTATGGCCATTTCTCTCAGGAGTTCTGGAATTT...ACTCACTAAAGGCCAGCGCACCCCAGGCCCCATAGTATTGCTGGTTATGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR TCA 90 bp TCAGGGTCCCTGCAAGAAATGGCAGTGCACTCACATAAGGACAGTTTGAGAAGACACATAAGGACAGTTTaGGAAGAGTCTCCTGACAAG +
Preference number: 4 (lower is better)
Translates to: SGSLQEMAVHSHKDSLRRHIRTV*EESPDK
Trigger: CTTGTCAGGAGACTCTTCTCAAACTGTCCTTATGTG...TCTTCTCAAACTGTCCTTATGTGAGTGCACTGCCATTTCTTGCAGGGACCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR TCA 90 bp TGCAAATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATCACACAAATACTCTAGGTTTGTaGTGGATGCAGGGGGATATG +
Preference number: 4 (lower is better)
Translates to: CKYATPAPAVLQQRRYHTNTLGL*WMQGDM
Trigger: CATATCCCCCTGCATCCATCACAAACCTAGAGTATT...TGTGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR GCA 90 bp AAGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCCCGGATCGATTTTTCTCATaGACCTTGTACATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: KTNGSQKCGELPDIPCSPDRFFS*TLYISL
Trigger: AAGGGAGATGTACAAGGTGCATGAGAAAAATCGATC...CGGGCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR GCA 90 bp AGGAATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCGATCGATTTTTCTCATaGACCTTGTACATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: RNKYWELTLSPVIGQHHSDRFFS*TLYISL
Trigger: AAGGGAGATGTACAAGGTGCATGAGAAAAATCGATC...GGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR GCA 90 bp AAATCCATAACCAGCAATACTATGGGGCCTGGGGTGCGCTGGCCTTTAGTGAGTAACCGATTTTTCTCATaGACCTTGTACATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: KSITSNTMGPGVRWPLVSNRFFS*TLYISL
Trigger: AAGGGAGATGTACAAGGTGCATGAGAAAAATCGGTT...ACTCACTAAAGGCCAGCGCACCCCAGGCCCCATAGTATTGCTGGTTATGGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp TTTATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTGCAAATATGCAACTGGGGGATATGAGAACTaGCTAACATTGCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: FIAVQAHEAHCVNCKYATGGYEN*LTLPLP
Trigger: GGGGAGGGGCAATGTTAGGCAGTTCTCATATCCCCC...AGTTGCATATTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR GCA 90 bp ATCTTTATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTGCAAATATGCATGCAACTCCAGCTCCTaGTGTTCTGCAACAGCGTCG +
Preference number: 4 (lower is better)
Translates to: IFIAVQAHEAHCVNCKYACNSSS*CSATAS
Trigger: CGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCA...TGCATATTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTATAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590641.6
ENST00000594339.1
ENST00000597457.5
CDS-3UTR CCA 90 bp GTGTTAATTGCAAATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATGGCCATACTTATCTaGCCTGATCCACTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: VLIANMQLQLLLFCNSVDMAILI*PDPLLV
Trigger: GACAAGGAGTGGATCAGGCCAGATAAGTATGGCCAT...ATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCAATTAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590641.6
ENST00000594339.1
ENST00000597457.5
CDS-3UTR CCA 90 bp ATCTTTATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTGCAAATATGCATTCCTCTCCTGCATCTaGGTTAGGTGGGAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: IFIAVQAHEAHCVNCKYAFLSCI*VRWERC
Trigger: GCACCTCTCCCACCTAACCCAGATGCAGGAGAGGAA...TGCATATTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTATAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR TCA 90 bp ATCTTTATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTGCAAATATGCAGTCCTTTTCTTCTTCTaGTTGCCCTCTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: IFIAVQAHEAHCVNCKYAVLFFF*LPSGAT
Trigger: AGTGGCCCCAGAGGGCAATCAGAAGAAGAAAAGGAC...TGCATATTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTATAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000597457.5
CDS-3UTR TCA 90 bp GCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATCACACAGTTTTGACTAAATTCCAGAACTCCTaGGAGAAATGGCCATACTTA +
Preference number: 4 (lower is better)
Translates to: ATPAPAVLQQRRYHTVLTKFQNS*EKWPYL
Trigger: TAAGTATGGCCATTTCTCTCAGGAGTTCTGGAATTT...AGTCAAAACTGTGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR TCA 90 bp AATAAAATCTTTATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTGCAAACCAGGCCCTCGTAGTTaGTGTCACAGTCACCGGCAT +
Preference number: 4 (lower is better)
Translates to: NKIFIAVQAHEAHCVNCKPGPRS*CHSHRH
Trigger: ATGCCGGTGACTGTGACATCAACTACGAGGGCCTGG...TTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTATAAAGATTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590641.6
ENST00000594339.1
ENST00000597457.5
CDS-3UTR GCA 90 bp TCCCTGCAAGAAATGGCAGTGCACTCACATAAGGACAGTTTGAGAAGAGTCTCCATAATGCCTGTTTGGTaGCCTCTACTGACAAAGCTT +
Preference number: 4 (lower is better)
Translates to: SLQEMAVHSHKDSLRRVSIMPVW*PLLTKL
Trigger: AAGCTTTGTCAGTAGAGGGCACCAAACAGGCATTAT...GGAGACTCTTCTCAAACTGTCCTTATGTGAGTGCACTGCCATTTCTTGCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp TGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATCACACAGTTTTGACGAGACTCACTGTGACTaGTCATCTACCATAAATACT +
Preference number: 4 (lower is better)
Translates to: CNSSSCCSATASISHSFDETHCD*SSTINT
Trigger: AGTATTTATGGTAGATGAGCAGTCACAGTGAGTCTC...GTCAAAACTGTGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR GCA 90 bp ATCTTTATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTGCAAATATGCACAGCTCCTGCTGTTCTaGAACAGCGTCGATATCACA +
Preference number: 4 (lower is better)
Translates to: IFIAVQAHEAHCVNCKYAQLLLF*NSVDIT
Trigger: TGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTG...TGCATATTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTATAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590641.6
ENST00000594339.1
ENST00000597457.5
CDS-3UTR TCA 90 bp AATAAAATCTTTATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTGCAAAGTCCTTTTCTTCTTCTaGTTGCCCTCTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: NKIFIAVQAHEAHCVNCKVLFFF*LPSGAT
Trigger: AGTGGCCCCAGAGGGCAATCAGAAGAAGAAAAGGAC...TTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTATAAAGATTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000597457.5
CDS-3UTR GCA 90 bp TGTGTTAATTGCAAATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGAAACCGATTTTTCTCATaGACCTTGTACATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: CVNCKYATPAPAVLQQRRNRFFS*TLYISL
Trigger: AAGGGAGATGTACAAGGTGCATGAGAAAAATCGGTT...TCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCAATTAACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000597457.5
CDS-3UTR GCA 90 bp AAAACCAGGAGTCATTTAATTCTTCCAGAGACTCACTGTGACTGCTCATCTACCGCCCACTGTGTTAATTaGAAATATGCAACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KTRSHLILPETHCDCSSTAHCVN*KYATPA
Trigger: AGCTGGAGTTGCATATTTGCAATTAACACAGTGGGC...GGTAGATGAGCAGTCACAGTGAGTCTCTGGAAGAATTAAATGACTCCTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000594339.1
CDS-3UTR TCA 90 bp TCCTATAATGCCTGTTTGGTGCCCTCTACTGACAAAGCTTATCCCCTTTCAAAAAAATTCCAGAACTCCTaGGAGAAATGGCCATACTTA +
Preference number: 4 (lower is better)
Translates to: SYNACLVPSTDKAYPLSKKFQNS*EKWPYL
Trigger: TAAGTATGGCCATTTCTCTCAGGAGTTCTGGAATTT...TTTTGAAAGGGGATAAGCTTTGTCAGTAGAGGGCACCAAACAGGCATTATAGGA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR GCA 90 bp TTTATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTGCAAATATGCAACTGCCCACTGTGTTAATTaGAAATATGCAACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FIAVQAHEAHCVNCKYATAHCVN*KYATPA
Trigger: AGCTGGAGTTGCATATTTGCAATTAACACAGTGGGC...AGTTGCATATTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590641.6
ENST00000594339.1
ENST00000597457.5
CDS-3UTR CCA 90 bp AAAATCTTTATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTGCAAATATATGGCCATACTTATCTaGCCTGATCCACTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: KIFIAVQAHEAHCVNCKYMAILI*PDPLLV
Trigger: GACAAGGAGTGGATCAGGCCAGATAAGTATGGCCAT...ATATTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTATAAAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590641.6
ENST00000594339.1
ENST00000597457.5
CDS-3UTR TCA 90 bp ATCTTTATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTGCAAATATGCAAAATTCCAGAACTCCTaGGAGAAATGGCCATACTTA +
Preference number: 4 (lower is better)
Translates to: IFIAVQAHEAHCVNCKYAKFQNS*EKWPYL
Trigger: TAAGTATGGCCATTTCTCTCAGGAGTTCTGGAATTT...TGCATATTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTATAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590641.6
ENST00000594339.1
ENST00000597457.5
CDS-3UTR GCA 90 bp AATAAAATCTTTATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTGCAAAAACCGATTTTTCTCATaGACCTTGTACATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: NKIFIAVQAHEAHCVNCKNRFFS*TLYISL
Trigger: AAGGGAGATGTACAAGGTGCATGAGAAAAATCGGTT...TTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTATAAAGATTTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000597457.5
CDS-3UTR CAA 90 bp GGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGGGAGCCCACAACCTCGCAATaGGGCAGCATCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: GRRMLHVLQWAQRPCTGEPTTSQ*GSISST
Trigger: GGTGGAGGAGATGCTGCCCAATTGCGAGGTTGTGGG...CTCCCCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS GCA 90 bp AGCCACAGGTTTGCACTCCCAGTACGGGGCTTGCCAGGCTTAGCCTaGTGCCTCACGGCTTTCTGCTCTCGTGGCCGCCAACAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: SHRFALPVRGLPGLA*CLTAFCSRGRQQRP
Trigger: GGGCCTCTGTTGGCGGCCACGAGAGCAGAAAGCCGTGAGGCAGCAGGCTAAGCCTGGCAAGCCCCGTACTGGGAGTGCAAACCTGTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS CCA 90 bp GGGCTTGCCAGGCTTAGCCTGCTGCCTCACGGCTTTCTGCTCTCGTaGCCGCCAACAGAGGCCCTGAATGCGGAGGCTGTAGAGCGGACT +
Preference number: 5 (lower is better)
Translates to: GLARLSLLPHGFLLS*PPTEALNAEAVERT
Trigger: AGTCCGCTCTACAGCCTCCGCATTCAGGGCCTCTGTTGGCGGCCACGAGAGCAGAAAGCCGTGAGGCAGCAGGCTAAGCCTGGCAAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS-3UTR CAA 90 bp GTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGGGCCGTATGGACCATGTaGCTTCTCCAGCCAGGTGTA +
Preference number: 5 (lower is better)
Translates to: VGRRMLHVLQWAQRPCTGAVWTM*LLQPGV
Trigger: TACACCTGGCTGGAGAAGCAACATGGTCCATACGGC...CCCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221943.14
ENST00000301183.15
CDS-3UTR CAA 90 bp GCCTGGTGCTTCAGGAGCTGGGTGCTGGGGAAGCCACATGCACTGCGGCGTCCACCCACAACCTCGCAATaGGGCAGCATCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: AWCFRSWVLGKPHALRRPPTTSQ*GSISST
Trigger: GGTGGAGGAGATGCTGCCCAATTGCGAGGTTGTGGG...TGGACGCCGCAGTGCATGTGGCTTCCCCAGCACCCAGCTCCTGAAGCACCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CAA 90 bp AGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCCCCACAACCTCGCAATaGGGCAGCATCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: SGVGRRMLHVLQWAQRPCPTTSQ*GSISST
Trigger: GGTGGAGGAGATGCTGCCCAATTGCGAGGTTGTGGG...GCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS GCA 90 bp GGCAGCCACTCCCTCATCCCCATTGGATACTCTCAGCCAAGTCCCTaGCTCCTCTCGCTCGCTAAAGCGTCTCCTCCGCCTGCGACCCTC +
Preference number: 5 (lower is better)
Translates to: GSHSLIPIGYSQPSP*LLSLAKASPPPATL
Trigger: GAGGGTCGCAGGCGGAGGAGACGCTTTAGCGAGCGAGAGGAGGCAGGGACTTGGCTGAGAGTATCCAATGGGGATGAGGGAGTGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS CCA 90 bp CTCGCTAAAGCGTCTCCTCCGCCTGCGACCCTCACAGATCCTTCCTaGCCCCCACTAGCCACAGGTTTGCACTCCCAGTACGGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: LAKASPPPATLTDPS*PPLATGLHSQYGAC
Trigger: GCAAGCCCCGTACTGGGAGTGCAAACCTGTGGCTAGTGGGGGCCAGGAAGGATCTGTGAGGGTCGCAGGCGGAGGAGACGCTTTAGCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS-3UTR CAA 90 bp GAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGGGCCTGATCCACTCCTaGTCTCGAAACTTGACTGCG +
Preference number: 5 (lower is better)
Translates to: EWSGAKDAACPAVGTAALGLIHS*SRNLTA
Trigger: CGCAGTCAAGTTTCGAGACAAGGAGTGGATCAGGCC...CAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000594660.5
CDS-3UTR CAA 90 bp CGGCCCTGCACGGGGGAGAACCATCCCTGTAAAGTGTCAGTAGTAGCCCCTGTGCAGGGTCCCTCGCAATaGGGCAGCATCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: RPCTGENHPCKVSVVAPVQGPSQ*GSISST
Trigger: GGTGGAGGAGATGCTGCCCAATTGCGAGGGACCCTG...CACAGGGGCTACTACTGACACTTTACAGGGATGGTTCTCCCCCGTGCAGGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594660.5
CDS TCA 90 bp AGGGTCCCTCGCAATTGGGCAGCATCTCCTCCACCAATATCTGAGTaGGGCCAGGGTTGGACACGGCAGGGAGGTCCGAGATGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: RVPRNWAASPPPISE*GQGWTRQGGPRCPA
Trigger: GGCTGGACATCTCGGACCTCCCTGCCGTGTCCAACCCTGGCCTCACTCAGATATTGGTGGAGGAGATGCTGCCCAATTGCGAGGGACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594660.5
CDS-3UTR CAA 90 bp AGTGAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCTCCTTGTCTCGAAACTaGACTGCGCCTCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SEWSGAKDAACPAVGTAASLSRN*TAPPCF
Trigger: GAAGCAGGGAGGCGCAGTCAAGTTTCGAGACAAGGA...GGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000594660.5
CDS-3UTR CAA 90 bp AGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCTCCCCCACCCTGACGTaGAGTGAAGACAAATGGAAG +
Preference number: 5 (lower is better)
Translates to: SGVGRRMLHVLQWAQRPCSPTLT*SEDKWK
Trigger: CTTCCATTTGTCTTCACTCAACGTCAGGGTGGGGGA...GCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CAA 90 bp GCCTGGTGCTTCAGGAGCTGGGTGCTGGGGAAGCCACATGCACTGCGGCGTCCATCCCCCACCCTGACGTaGAGTGAAGACAAATGGAAG +
Preference number: 5 (lower is better)
Translates to: AWCFRSWVLGKPHALRRPSPTLT*SEDKWK
Trigger: CTTCCATTTGTCTTCACTCAACGTCAGGGTGGGGGA...TGGACGCCGCAGTGCATGTGGCTTCCCCAGCACCCAGCTCCTGAAGCACCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CAA 90 bp GAGGTGCCTCAGTGGAGGCGCTGTGTCTCCTACGCAACTTCTGAGGGCTGGAGGCAGGGAGCCGCCATCTaGCTAAGGTTTCGTAACCGG +
Preference number: 5 (lower is better)
Translates to: EVPQWRRCVSYATSEGWRQGAAI*LRFRNR
Trigger: CCGGTTACGAAACCTTAGCAAGATGGCGGCTCCCTG...CCTCCAGCCCTCAGAAGTTGCGTAGGAGACACAGCGCCTCCACTGAGGCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592922.6
CDS TCA 90 bp CCACAACCTCGCAATTGGGCAGCATCTCCTCCACCAATATCTGAGTaGGGCCAGGGTTGGACACGGCAGGGAGGTCCGAGATGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: PQPRNWAASPPPISE*GQGWTRQGGPRCPA
Trigger: GGCTGGACATCTCGGACCTCCCTGCCGTGTCCAACCCTGGCCTCACTCAGATATTGGTGGAGGAGATGCTGCCCAATTGCGAGGTTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589503.1
ENST00000589970.5
ENST00000592922.6
CDS TCA 90 bp CCCCACCCTTGCCTGTCCATTAGCTCCTTGTGTCATCCCTCCCTCTaGTTGGTTAGTCGCGTCGCTCTTCGGCAGCCACTCCCTCATCCC +
Preference number: 5 (lower is better)
Translates to: PHPCLSISSLCHPSL*LVSRVALRQPLPHP
Trigger: GGGATGAGGGAGTGGCTGCCGAAGAGCGACGCGACTAACCAATCAGAGGGAGGGATGACACAAGGAGCTAATGGACAGGCAAGGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS TCA 90 bp AGTCAGGGTCCCTCGCAATTGGGCAGCATCTCCTCCACCAATATCTaGGTGAGGCCAGGGTTGGACACGGCAGGGAGGTCCGAGATGTCC +
Preference number: 5 (lower is better)
Translates to: SQGPSQLGSISSTNI*VRPGLDTAGRSEMS
Trigger: GGACATCTCGGACCTCCCTGCCGTGTCCAACCCTGGCCTCACTCAGATATTGGTGGAGGAGATGCTGCCCAATTGCGAGGGACCCTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594660.5
CDS-3UTR CAA 90 bp GTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCCTGCACGGGGTTTTTCTCATGCACCTaGTACATCTCCCTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: VGRRMLHVLQWAQRPCTGFFSCT*YISLWS
Trigger: GCTCCAAAGGGAGATGTACAAGGTGCATGAGAAAAA...CCCCGTGCAGGGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CAA 90 bp CCCAGAGAGGTGCCTCAGTGGAGGCGCTGTGTCTCCTACGCAACTTCTGAGGGCGCCGTATGGACCATGTaGCTTCTCCAGCCAGGTGTA +
Preference number: 5 (lower is better)
Translates to: PREVPQWRRCVSYATSEGAVWTM*LLQPGV
Trigger: TACACCTGGCTGGAGAAGCAACATGGTCCATACGGC...GCCCTCAGAAGTTGCGTAGGAGACACAGCGCCTCCACTGAGGCACCTCTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221943.14
CDS-3UTR CAA 90 bp TGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCTGACGGCCGTATGGACCATGTaGCTTCTCCAGCCAGGTGTA +
Preference number: 5 (lower is better)
Translates to: WELTLSPVIGQHHSPTLTAVWTM*LLQPGV
Trigger: TACACCTGGCTGGAGAAGCAACATGGTCCATACGGC...CGTCAGGGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR CAA 90 bp TGGCTCTCTGCGGCTACTAACAGCCTGAGCCTTTACCTCCCCAGGCCTGAACAGCCCACAACCTCGCAATaGGGCAGCATCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: WLSAATNSLSLYLPRPEQPTTSQ*GSISST
Trigger: GGTGGAGGAGATGCTGCCCAATTGCGAGGTTGTGGG...CTGTTCAGGCCTGGGGAGGTAAAGGCTCAGGCTGTTAGTAGCCGCAGAGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS TCA 90 bp ACTCCCACAACCTCGCAATTGGGCAGCATCTCCTCCACCAATATCTaGGTGAGGCCAGGGTTGGACACGGCAGGGAGGTCCGAGATGTCC +
Preference number: 5 (lower is better)
Translates to: TPTTSQLGSISSTNI*VRPGLDTAGRSEMS
Trigger: GGACATCTCGGACCTCCCTGCCGTGTCCAACCCTGGCCTCACTCAGATATTGGTGGAGGAGATGCTGCCCAATTGCGAGGTTGTGGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589503.1
ENST00000589970.5
ENST00000592922.6
CDS TCA 90 bp TGGACACGGCAGGGAGGTCCGAGATGTCCAGCCTGCGGAGGTTCCTaGAAAGGGGTGAGAAGGACAGGAAGCCAGTGTAAGGACAGCATG +
Preference number: 5 (lower is better)
Translates to: WTRQGGPRCPACGGS*KGVRRTGSQCKDSM
Trigger: CATGCTGTCCTTACACTGGCTTCCTGTCCTTCTCACCCCTTTTCAGGAACCTCCGCAGGCTGGACATCTCGGACCTCCCTGCCGTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589503.1
CDS TCA 90 bp TCTCCACCCCACCGCACTCACGGAGGTTATCCAGGCCCTCGTAGTTaGTGTCACAGTCACCGGCATCCACAGCTTCGACAGGCACTTCAC +
Preference number: 5 (lower is better)
Translates to: SPPHRTHGGYPGPRS*CHSHRHPQLRQALH
Trigger: GTGAAGTGCCTGTCGAAGCTGTGGATGCCGGTGACTGTGACATCAACTACGAGGGCCTGGATAACCTCCGTGAGTGCGGTGGGGTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595407.1
CDS GCA 90 bp GCCTCACGGCTTTCTGCTCTCGTGGCCGCCAACAGAGGCCCTGAATaGGGAGGCTGTAGAGCGGACTTCAAATTTGGGGCTCTAGGAACT +
Preference number: 5 (lower is better)
Translates to: ASRLSALVAANRGPE*GGCRADFKFGALGT
Trigger: AGTTCCTAGAGCCCCAAATTTGAAGTCCGCTCTACAGCCTCCGCATTCAGGGCCTCTGTTGGCGGCCACGAGAGCAGAAAGCCGTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS CCA 90 bp GGTCAGGAACTGGAGTATTGTCCTTTTCTTCTTCTGATTGCCCTCTaGGGCCACTGCCGCACCCAGGCGATGGATGCCCCTGATACGCCC +
Preference number: 5 (lower is better)
Translates to: GQELEYCPFLLLIAL*GHCRTQAMDAPDTP
Trigger: GGGCGTATCAGGGGCATCCATCGCCTGGGTGCGGCAGTGGCCCCAGAGGGCAATCAGAAGAAGAAAAGGACAATACTCCAGTTCCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000586786.1
ENST00000589102.1
ENST00000589970.5
ENST00000590641.6
ENST00000592922.6
ENST00000595407.1
ENST00000595425.5
ENST00000597457.5
CDS-3UTR CAA 90 bp TACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCTGTCCTTGTCTCGAAACTaGACTGCGCCTCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: YWELTLSPVIGQHHSPTLSLSRN*TAPPCF
Trigger: GAAGCAGGGAGGCGCAGTCAAGTTTCGAGACAAGGA...CAGGGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR CAA 90 bp CTGAGCCTTTACCTCCCCAGGCCTGAACAGGGGCATGGAAAGGGCTGCCTGACAGGCCTGATCCACTCCTaGTCTCGAAACTTGACTGCG +
Preference number: 5 (lower is better)
Translates to: LSLYLPRPEQGHGKGCLTGLIHS*SRNLTA
Trigger: CGCAGTCAAGTTTCGAGACAAGGAGTGGATCAGGCC...TGTCAGGCAGCCCTTTCCATGCCCCTGTTCAGGCCTGGGGAGGTAAAGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000589970.5
CDS-3UTR CAA 90 bp AGTGAGTGGAGTGGGGCGAAGGATGCTGCATGTCCTGCAGTGGGCACAGCGGCCGGCCTGATCCACTCCTaGTCTCGAAACCGATTTTTC +
Preference number: 5 (lower is better)
Translates to: SEWSGAKDAACPAVGTAAGLIHS*SRNRFF
Trigger: GAAAAATCGGTTTCGAGACAAGGAGTGGATCAGGCC...GGCCGCTGTGCCCACTGCAGGACATGCAGCATCCTTCGCCCCACTCCACTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438807.7
ENST00000592922.6
CDS TCA 90 bp ATGTCCAGCCTGCGGAGGTTCGGAGGTTATCCAGGCCCTCGTAGTTaGTGTCACAGTCACCGGCATCCACAGCTTCGACAGGCACTTCAC +
Preference number: 5 (lower is better)
Translates to: MSSLRRFGGYPGPRS*CHSHRHPQLRQALH
Trigger: GTGAAGTGCCTGTCGAAGCTGTGGATGCCGGTGACTGTGACATCAACTACGAGGGCCTGGATAACCTCCGAACCTCCGCAGGCTGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
CDS TCA 90 bp CTCCCTGAGCTTCAAAACGAGACACAGGTCGGGCTCACGCACCTGTaGACCCAGCACTTTGTGGAGGCCGAGGCGAAAGCATCGCTTGAA +
Preference number: 5 (lower is better)
Translates to: LPELQNETQVGLTHL*TQHFVEAEAKASLE
Trigger: TTCAAGCGATGCTTTCGCCTCGGCCTCCACAAAGTGCTGGGTTCACAGGTGCGTGAGCCCGACCTGTGTCTCGTTTTGAAGCTCAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS CCA 90 bp CGGTCTTATCCCACGCTCCTGGTTCAGCGCGAACTTATTCTCCTGTaGCCACGCCCCGCGTTTTCTAACCGTCCTCTTAAAGGTGCACGC +
Preference number: 5 (lower is better)
Translates to: RSYPTLLVQRELILL*PRPAFSNRPLKGAR
Trigger: GCGTGCACCTTTAAGAGGACGGTTAGAAAACGCGGGGCGTGGCCACAGGAGAATAAGTTCGCGCTGAACCAGGAGCGTGGGATAAGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS-3UTR CAA 90 bp TGGAAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGTCCTTGTCTCGAAACTaGACTGCGCCTCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: WKGLPDRVTGAVTFSQGQSLSRN*TAPPCF
Trigger: GAAGCAGGGAGGCGCAGTCAAGTTTCGAGACAAGGA...CTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR CAA 90 bp AAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGCCTGATCCACTCCTaGTCTCGAAACTTGACTGCG +
Preference number: 5 (lower is better)
Translates to: KGLPDRVTGAVTFSQGQPGLIHS*SRNLTA
Trigger: CGCAGTCAAGTTTCGAGACAAGGAGTGGATCAGGCC...TGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR CAA 90 bp GACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGGCTAAAGGCTCCCCCACCCTGACGTaGAGTGAAGACAAATGGAAG +
Preference number: 5 (lower is better)
Translates to: DIPCSPLRSHVSGDRAKGSPTLT*SEDKWK
Trigger: CTTCCATTTGTCTTCACTCAACGTCAGGGTGGGGGA...GCCTTTAGCCCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
CDS-3UTR CAA 90 bp GAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGTCCCCCACCCTGACGTaGAGTGAAGACAAATGGAAG +
Preference number: 5 (lower is better)
Translates to: ELPDIPCSPLRSHVSGDRSPTLT*SEDKWK
Trigger: CTTCCATTTGTCTTCACTCAACGTCAGGGTGGGGGA...CCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS GCA 90 bp TCAACCTTACAGGACAGTGTGTGTGCGTGCGTGTGTGTGTGTGCGTaGGTGCATGCGTGCATGTGTGTGTGTATAGGGAGGTACTGGCCC +
Preference number: 5 (lower is better)
Translates to: STLQDSVCACVCVCA*VHACMCVCIGRYWP
Trigger: GGGCCAGTACCTCCCTATACACACACACATGCACGCATGCACGCACGCACACACACACACGCACGCACACACACTGTCCTGTAAGGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589503.1
CDS CCA 90 bp ACCCTTGCCTGTCCATTAGCTCCTTGTGTCATCCCTCCCTCTGATTaGTTAGTCGCGTCGCTCTTCGGCAGCCACTCCCTCATCCCCATT +
Preference number: 5 (lower is better)
Translates to: TLACPLAPCVIPPSD*LVASLFGSHSLIPI
Trigger: AATGGGGATGAGGGAGTGGCTGCCGAAGAGCGACGCGACTAACCAATCAGAGGGAGGGATGACACAAGGAGCTAATGGACAGGCAAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS-3UTR CAA 90 bp AAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCTCCTTGTCTCGAAACTaGACTGCGCCTCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: KYWELTLSPVIGQHHSPTSLSRN*TAPPCF
Trigger: GAAGCAGGGAGGCGCAGTCAAGTTTCGAGACAAGGA...GGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR CAA 90 bp AAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCATCCCCCACCCTGACGTaGAGTGAAGACAAATGGAAG +
Preference number: 5 (lower is better)
Translates to: KGLPDRVTGAVTFSQGQPSPTLT*SEDKWK
Trigger: CTTCCATTTGTCTTCACTCAACGTCAGGGTGGGGGA...TGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CAA 90 bp TACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCACCCTGCTTGTACATCTCCCTTaGGAGCAAGTAATCCCTCAG +
Preference number: 5 (lower is better)
Translates to: YWELTLSPVIGQHHSPTLLVHLP*EQVIPQ
Trigger: CTGAGGGATTACTTGCTCCAAAGGGAGATGTACAAG...CAGGGTGGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CAA 90 bp GACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGGCTAAAGGCCTTGTACATCTCCCTTaGGAGCAAGTAATCCCTCAG +
Preference number: 5 (lower is better)
Translates to: DIPCSPLRSHVSGDRAKGLVHLP*EQVIPQ
Trigger: CTGAGGGATTACTTGCTCCAAAGGGAGATGTACAAG...GCCTTTAGCCCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
CDS-3UTR CAA 90 bp GTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTGGGAACTCACGCTCTCTCCCCACAACCTCGCAATaGGGCAGCATCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: VTFSQGQPGINTGNSRSLPTTSQ*GSISST
Trigger: GGTGGAGGAGATGCTGCCCAATTGCGAGGTTGTGGG...GAGAGAGCGTGAGTTCCCAGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CAA 90 bp GACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATACTCCCACAACCTCGCAATaGGGCAGCATCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: DRVTGAVTFSQGQPGINTPTTSQ*GSISST
Trigger: GGTGGAGGAGATGCTGCCCAATTGCGAGGTTGTGGG...AGTATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS GCA 90 bp TCGAAACTTGACTGCGCCTCCCTGCTTCAGGATGAAAAAGGCACCTaGGCCGTATGGACCATGTTGCTTCTCCAGCCAGGTGTAAGATCG +
Preference number: 5 (lower is better)
Translates to: SKLDCASLLQDEKGT*AVWTMLLLQPGVRS
Trigger: CGATCTTACACCTGGCTGGAGAAGCAACATGGTCCATACGGCGCAGGTGCCTTTTTCATCCTGAAGCAGGGAGGCGCAGTCAAGTTTCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000586786.1
ENST00000589970.5
ENST00000595407.1
CDS-3UTR CAA 90 bp AAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCACTTGTACATCTCCCTTaGGAGCAAGTAATCCCTCAG +
Preference number: 5 (lower is better)
Translates to: KGLPDRVTGAVTFSQGQPLVHLP*EQVIPQ
Trigger: CTGAGGGATTACTTGCTCCAAAGGGAGATGTACAAG...TGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CAA 90 bp GAGCTACCAGACATTCCATGCAGCCCGCTGAGAAGCCACGTGAGTGGGGACAGGTTTTTCTCATGCACCTaGTACATCTCCCTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: ELPDIPCSPLRSHVSGDRFFSCT*YISLWS
Trigger: GCTCCAAAGGGAGATGTACAAGGTGCATGAGAAAAA...CCTGTCCCCACTCACGTGGCTTCTCAGCGGGCTGCATGGAATGTCTGGTAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS CCA 90 bp GACTGCGCCTCCCTGCTTCAGGATGAAAAAGGCACCTGCGCCGTATaGACCATGTTGCTTCTCCAGCCAGGTGTAAGATCGATTTTTCTC +
Preference number: 5 (lower is better)
Translates to: DCASLLQDEKGTCAV*TMLLLQPGVRSIFL
Trigger: GAGAAAAATCGATCTTACACCTGGCTGGAGAAGCAACATGGTCCATACGGCGCAGGTGCCTTTTTCATCCTGAAGCAGGGAGGCGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000586786.1
ENST00000589970.5
ENST00000595407.1
CDS-3UTR CAA 90 bp TGGAAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGTTTTTCTCATGCACCTaGTACATCTCCCTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: WKGLPDRVTGAVTFSQGQFFSCT*YISLWS
Trigger: GCTCCAAAGGGAGATGTACAAGGTGCATGAGAAAAA...CTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CAA 90 bp AAAGGGCTGCCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCATTTTTCTCATGCACCTaGTACATCTCCCTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: KGLPDRVTGAVTFSQGQPFFSCT*YISLWS
Trigger: GCTCCAAAGGGAGATGTACAAGGTGCATGAGAAAAA...TGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGGCAGCCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CAA 90 bp AGGAATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCGCCGTATGGACCATGTaGCTTCTCCAGCCAGGTGTA +
Preference number: 5 (lower is better)
Translates to: RNKYWELTLSPVIGQHHSAVWTM*LLQPGV
Trigger: TACACCTGGCTGGAGAAGCAACATGGTCCATACGGC...GGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000589970.5
CDS-3UTR CAA 90 bp TTGACTGGAAATCCATTTGGGGTGCTGGGGAACGTTATTCCCAGAGAGGTGCCTGGCCTGATCCACTCCTaGTCTCGAAACTTGACTGCG +
Preference number: 5 (lower is better)
Translates to: LTGNPFGVLGNVIPREVPGLIHS*SRNLTA
Trigger: CGCAGTCAAGTTTCGAGACAAGGAGTGGATCAGGCC...AGGCACCTCTCTGGGAATAACGTTCCCCAGCACCCCAAATGGATTTCCAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221943.14
CDS GCA 90 bp AATTTCAACCTTACAGGACAGTGTGTGTGCGTGCGTGTGTGTGTGTaGGTGCGTGCATGCGTGCATGTGTGTGTGTATAGGGAGGTACTG +
Preference number: 5 (lower is better)
Translates to: NFNLTGQCVCVRVCV*VRACVHVCVYREVL
Trigger: CAGTACCTCCCTATACACACACACATGCACGCATGCACGCACGCACACACACACACGCACGCACACACACTGTCCTGTAAGGTTGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589503.1
CDS-3UTR CAA 90 bp AATAAATCCATAACCAGCAATACTATGGGGCCTGGGGTGCGCTGGCCTTTAGTGTCCTTGTCTCGAAACTaGACTGCGCCTCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: NKSITSNTMGPGVRWPLVSLSRN*TAPPCF
Trigger: GAAGCAGGGAGGCGCAGTCAAGTTTCGAGACAAGGA...CACTAAAGGCCAGCGCACCCCAGGCCCCATAGTATTGCTGGTTATGGATTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221943.14
CDS-3UTR CAA 90 bp AATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCCCCTTGTACATCTCCCTTaGGAGCAAGTAATCCCTCAG +
Preference number: 5 (lower is better)
Translates to: NKYWELTLSPVIGQHHSPLVHLP*EQVIPQ
Trigger: CTGAGGGATTACTTGCTCCAAAGGGAGATGTACAAG...GGGGGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CAA 90 bp AGGAATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCGGCCTGATCCACTCCTaGTCTCGAAACCGATTTTTC +
Preference number: 5 (lower is better)
Translates to: RNKYWELTLSPVIGQHHSGLIHS*SRNRFF
Trigger: GAAAAATCGGTTTCGAGACAAGGAGTGGATCAGGCC...GGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438807.7
ENST00000592922.6
CDS-3UTR CAA 90 bp AGGAATAAATACTGGGAACTCACGCTCTCTCCTGTGATTGGCCAGCACCACTCCCTTGTACATCTCCCTTaGGAGCAAGTAATCCCTCAG +
Preference number: 5 (lower is better)
Translates to: RNKYWELTLSPVIGQHHSLVHLP*EQVIPQ
Trigger: CTGAGGGATTACTTGCTCCAAAGGGAGATGTACAAG...GGAGTGGTGCTGGCCAATCACAGGAGAGAGCGTGAGTTCCCAGTATTTATTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CAA 90 bp CCTGACAGGGTGACAGGAGCTGTGACCTTTAGCCAAGGGCAGCCAGGAATAAATTTTTTCTCATGCACCTaGTACATCTCCCTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: PDRVTGAVTFSQGQPGINFFSCT*YISLWS
Trigger: GCTCCAAAGGGAGATGTACAAGGTGCATGAGAAAAA...ATTTATTCCTGGCTGCCCTTGGCTAAAGGTCACAGCTCCTGTCACCCTGTCAGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS TCA 90 bp GCATCCACAGCTTCGACAGGCACTTCACAGAAATTCCAGAACTCCTaGGAGAAATGGCCATACTTATCTGGCCTGATCCACTCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: ASTASTGTSQKFQNS*EKWPYLSGLIHSLS
Trigger: AGACAAGGAGTGGATCAGGCCAGATAAGTATGGCCATTTCTCTCAGGAGTTCTGGAATTTCTGTGAAGTGCCTGTCGAAGCTGTGGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589102.1
ENST00000589503.1
ENST00000589970.5
ENST00000590641.6
ENST00000592922.6
ENST00000594339.1
ENST00000594660.5
ENST00000595407.1
ENST00000595425.5
ENST00000597457.5
CDS GCA 90 bp TGGGGTGTTCTTCCCGGCAGAGTACCTTTCTTTCCTGACTGCAATTaGAGTCTCCCCAAGCTTTCTTATTCTTCCAGCTTCCACTCACTA +
Preference number: 5 (lower is better)
Translates to: WGVLPGRVPFFPDCN*SLPKLSYSSSFHSL
Trigger: TAGTGAGTGGAAGCTGGAAGAATAAGAAAGCTTGGGGAGACTGCAATTGCAGTCAGGAAAGAAAGGTACTCTGCCGGGAAGAACACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS GCA 90 bp AGAAGATGGGGTGTTCTTCCCGGCAGAGTACCTTTCTTTCCTGACTaGAATTGCAGTCTCCCCAAGCTTTCTTATTCTTCCAGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: RRWGVLPGRVPFFPD*NCSLPKLSYSSSFH
Trigger: GTGGAAGCTGGAAGAATAAGAAAGCTTGGGGAGACTGCAATTGCAGTCAGGAAAGAAAGGTACTCTGCCGGGAAGAACACCCCATCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS GCA 90 bp CTCTTAAAGGTGCACGCACTTTTTACTCTTAAAGGGTTTAGGGATTaGTCACAGCGCCCTCTCCCTGAGCTTCAAAACGAGACACAGGTC +
Preference number: 5 (lower is better)
Translates to: LLKVHALFTLKGFRD*SQRPLPELQNETQV
Trigger: GACCTGTGTCTCGTTTTGAAGCTCAGGGAGAGGGCGCTGTGAGCAATCCCTAAACCCTTTAAGAGTAAAAAGTGCGTGCACCTTTAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS-3UTR CAA 90 bp TTGCAAATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATATCACACGGCCTGATCCACTCCTaGTCTCGAAACATTCATCCT +
Preference number: 5 (lower is better)
Translates to: LQICNSSSCCSATASISHGLIHS*SRNIHP
Trigger: AGGATGAATGTTTCGAGACAAGGAGTGGATCAGGCC...GTGTGATATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594339.1
CDS CCA 90 bp AACAAAACAAACCCCAGGACTCCACAATCTTTCCCTAGGAGAAGATaGGGTGTTCTTCCCGGCAGAGTACCTTTCTTTCCTGACTGCAAT +
Preference number: 5 (lower is better)
Translates to: NKTNPRTPQSFPRRR*GVLPGRVPFFPDCN
Trigger: ATTGCAGTCAGGAAAGAAAGGTACTCTGCCGGGAAGAACACCCCATCTTCTCCTAGGGAAAGATTGTGGAGTCCTGGGGTTTGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS-3UTR CAA 90 bp GTGAAGACAAATGGAAGCCAGAAGTGTGGTGAGCTACCAGACATTCCATGCAGCTTTTTCTCATGCACCTaGTACATCTCCCTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: VKTNGSQKCGELPDIPCSFFSCT*YISLWS
Trigger: GCTCCAAAGGGAGATGTACAAGGTGCATGAGAAAAA...GCTGCATGGAATGTCTGGTAGCTCACCACACTTCTGGCTTCCATTTGTCTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589970.5
ENST00000592922.6
CDS-3UTR CAA 90 bp GTGTTAATTGCAAATATGCAACTCCAGCTCCTGCTGTTCTGCAACAGCGTCGATTTTTTCTCATGCACCTaGTACATCTCCCTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: VLIANMQLQLLLFCNSVDFFSCT*YISLWS
Trigger: GCTCCAAAGGGAGATGTACAAGGTGCATGAGAAAAA...ATCGACGCTGTTGCAGAACAGCAGGAGCTGGAGTTGCATATTTGCAATTAACAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000597457.5
CDS-3UTR CAA 90 bp AAAACCAGGAGTCATTTAATTCTTCCAGAGACTCACTGTGACTGCTCATCTACCGGCCTGATCCACTCCTaGTCTCGAAACCGATTTTTC +
Preference number: 5 (lower is better)
Translates to: KTRSHLILPETHCDCSSTGLIHS*SRNRFF
Trigger: GAAAAATCGGTTTCGAGACAAGGAGTGGATCAGGCC...GGTAGATGAGCAGTCACAGTGAGTCTCTGGAAGAATTAAATGACTCCTGGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590641.6
CDS CCA 90 bp TTTGGAGCAAGTAATCCCTCAGAGCCTCCACATCGTAGAAATAGTTaGTCAGGAACTGGAGTATTGTCCTTTTCTTCTTCTGATTGCCCT +
Preference number: 5 (lower is better)
Translates to: FGASNPSEPPHRRNS*SGTGVLSFSSSDCP
Trigger: AGGGCAATCAGAAGAAGAAAAGGACAATACTCCAGTTCCTGACCAACTATTTCTACGATGTGGAGGCTCTGAGGGATTACTTGCTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000586786.1
ENST00000589102.1
ENST00000589970.5
ENST00000590641.6
ENST00000592922.6
ENST00000595407.1
ENST00000595425.5
ENST00000597457.5
CDS-3UTR CAA 90 bp ATCTTTATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTGCAAATATGCAGGCCTGATCCACTCCTaGTCTCGAAACCGATTTTTC +
Preference number: 5 (lower is better)
Translates to: IFIAVQAHEAHCVNCKYAGLIHS*SRNRFF
Trigger: GAAAAATCGGTTTCGAGACAAGGAGTGGATCAGGCC...TGCATATTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTATAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590641.6
ENST00000597457.5
CDS-3UTR CAA 90 bp ATCTTTATAGCTGTCCAGGCACATGAAGCCCACTGTGTTAATTGCAAATATGCACGATATCACACAGTTTaGAGGAGGTTATCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: IFIAVQAHEAHCVNCKYARYHTV*RRLSRP
Trigger: GGGCCTGGATAACCTCCTCAAAACTGTGTGATATCG...TGCATATTTGCAATTAACACAGTGGGCTTCATGTGCCTGGACAGCTATAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597457.5
CDS-3UTR CAA 90 bp AAAACCAGGAGTCATTTAATTCTTCCAGAGACTCACTGTGACTGCTCATCTACCTTTTTCTCATGCACCTaGTACATCTCCCTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: KTRSHLILPETHCDCSSTFFSCT*YISLWS
Trigger: GCTCCAAAGGGAGATGTACAAGGTGCATGAGAAAAA...GGTAGATGAGCAGTCACAGTGAGTCTCTGGAAGAATTAAATGACTCCTGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590641.6
CDS CAA 72 bp GCGACCAGGCGCAGGGACGCCCAGGGAGCCGCCATCTaGCTAAGGTTTCGTAACCGGAAGGGGCCGGTCTTA +
Preference number: 6 (lower is better)
Translates to: ATRRRDAQGAAI*LRFRNRKGPVL
Trigger: TAAGACCGGCCCCTTCCGGTTACGAAACCTTAGCAAGATGGCGGCTCCCTGGGCGTCCCTGCGCCTGGTCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592922.6
CDS CCA 72 bp GCGTCTCCTCCGCCTGCGACCCTCACAGATCCTTCCTaGCCCCCACTAGCCACAGGTTTGCACTCCCAGTAC +
Preference number: 6 (lower is better)
Translates to: ASPPPATLTDPS*PPLATGLHSQY
Trigger: GTACTGGGAGTGCAAACCTGTGGCTAGTGGGGGCCAGGAAGGATCTGTGAGGGTCGCAGGCGGAGGAGACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS CAA 90 bp TTCCTGGCCCCCACTAGCCACAGGTTTGCACTCCCAGTACGGGGCTaGCCAGGCTTAGCCTGCTGCCTCACGGCTTTCTGCTCTCGTGGC +
Preference number: 6 (lower is better)
Translates to: FLAPTSHRFALPVRG*PGLACCLTAFCSRG
Trigger: GCCACGAGAGCAGAAAGCCGTGAGGCAGCAGGCTAAGCCTGGCAAGCCCCGTACTGGGAGTGCAAACCTGTGGCTAGTGGGGGCCAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS CCA 72 bp AGGCTTAGCCTGCTGCCTCACGGCTTTCTGCTCTCGTaGCCGCCAACAGAGGCCCTGAATGCGGAGGCTGTA +
Preference number: 6 (lower is better)
Translates to: RLSLLPHGFLLS*PPTEALNAEAV
Trigger: TACAGCCTCCGCATTCAGGGCCTCTGTTGGCGGCCACGAGAGCAGAAAGCCGTGAGGCAGCAGGCTAAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS CCA 72 bp CGCGTCGCTCTTCGGCAGCCACTCCCTCATCCCCATTaGATACTCTCAGCCAAGTCCCTGCCTCCTCTCGCT +
Preference number: 6 (lower is better)
Translates to: RVALRQPLPHPH*ILSAKSLPPLA
Trigger: AGCGAGAGGAGGCAGGGACTTGGCTGAGAGTATCCAATGGGGATGAGGGAGTGGCTGCCGAAGAGCGACGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS CAA 72 bp CCCACTAGCCACAGGTTTGCACTCCCAGTACGGGGCTaGCCAGGCTTAGCCTGCTGCCTCACGGCTTTCTGC +
Preference number: 6 (lower is better)
Translates to: PTSHRFALPVRG*PGLACCLTAFC
Trigger: GCAGAAAGCCGTGAGGCAGCAGGCTAAGCCTGGCAAGCCCCGTACTGGGAGTGCAAACCTGTGGCTAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS CAA 72 bp TCGCGTCGCTCTTCGGCAGCCACTCCCTCATCCCCATaGGATACTCTCAGCCAAGTCCCTGCCTCCTCTCGC +
Preference number: 6 (lower is better)
Translates to: SRRSSAATPSSP*DTLSQVPASSR
Trigger: GCGAGAGGAGGCAGGGACTTGGCTGAGAGTATCCAATGGGGATGAGGGAGTGGCTGCCGAAGAGCGACGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS TCA 72 bp CCCTCGCAATTGGGCAGCATCTCCTCCACCAATATCTaGGTGAGGCCAGGGTTGGACACGGCAGGGAGGTCC +
Preference number: 6 (lower is better)
Translates to: PSQLGSISSTNI*VRPGLDTAGRS
Trigger: GGACCTCCCTGCCGTGTCCAACCCTGGCCTCACTCAGATATTGGTGGAGGAGATGCTGCCCAATTGCGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594660.5
CDS TCA 72 bp CGCAATTGGGCAGCATCTCCTCCACCAATATCTGAGTaGGGCCAGGGTTGGACACGGCAGGGAGGTCCGAGA +
Preference number: 6 (lower is better)
Translates to: RNWAASPPPISE*GQGWTRQGGPR
Trigger: TCTCGGACCTCCCTGCCGTGTCCAACCCTGGCCTCACTCAGATATTGGTGGAGGAGATGCTGCCCAATTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589503.1
ENST00000589970.5
ENST00000592922.6
ENST00000594660.5
CDS TCA 72 bp ACCTCGCAATTGGGCAGCATCTCCTCCACCAATATCTaGGTGAGGCCAGGGTTGGACACGGCAGGGAGGTCC +
Preference number: 6 (lower is better)
Translates to: TSQLGSISSTNI*VRPGLDTAGRS
Trigger: GGACCTCCCTGCCGTGTCCAACCCTGGCCTCACTCAGATATTGGTGGAGGAGATGCTGCCCAATTGCGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000438807.7
ENST00000589503.1
ENST00000589970.5
ENST00000592922.6
CDS GCA 72 bp TCCCTCATCCCCATTGGATACTCTCAGCCAAGTCCCTaGCTCCTCTCGCTCGCTAAAGCGTCTCCTCCGCCT +
Preference number: 6 (lower is better)
Translates to: SLIPIGYSQPSP*LLSLAKASPPP
Trigger: AGGCGGAGGAGACGCTTTAGCGAGCGAGAGGAGGCAGGGACTTGGCTGAGAGTATCCAATGGGGATGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS CAA 72 bp GAACTCCGGTCACTTACCGCCCAGGGAGCCGCCATCTaGCTAAGGTTTCGTAACCGGAAGGGGCCGGTCTTA +
Preference number: 6 (lower is better)
Translates to: ELRSLTAQGAAI*LRFRNRKGPVL
Trigger: TAAGACCGGCCCCTTCCGGTTACGAAACCTTAGCAAGATGGCGGCTCCCTGGGCGGTAAGTGACCGGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS TCA 72 bp CTGCGGAGGTTCGGAGGTTATCCAGGCCCTCGTAGTTaGTGTCACAGTCACCGGCATCCACAGCTTCGACAG +
Preference number: 6 (lower is better)
Translates to: LRRFGGYPGPRS*CHSHRHPQLRQ
Trigger: CTGTCGAAGCTGTGGATGCCGGTGACTGTGACATCAACTACGAGGGCCTGGATAACCTCCGAACCTCCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301183.15
ENST00000438807.7
ENST00000589970.5
CDS TCA 72 bp CAGGGAGGTCCGAGATGTCCAGCCTGCGGAGGTTCCTaGAAAGGGGTGAGAAGGACAGGAAGCCAGTGTAAG +
Preference number: 6 (lower is better)
Translates to: QGGPRCPACGGS*KGVRRTGSQCK
Trigger: CTTACACTGGCTTCCTGTCCTTCTCACCCCTTTTCAGGAACCTCCGCAGGCTGGACATCTCGGACCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589503.1
CDS TCA 72 bp CACCGCACTCACGGAGGTTATCCAGGCCCTCGTAGTTaGTGTCACAGTCACCGGCATCCACAGCTTCGACAG +
Preference number: 6 (lower is better)
Translates to: HRTHGGYPGPRS*CHSHRHPQLRQ
Trigger: CTGTCGAAGCTGTGGATGCCGGTGACTGTGACATCAACTACGAGGGCCTGGATAACCTCCGTGAGTGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595407.1
CDS GCA 72 bp GACTGCGCCTCCCTGCTTCAGGATGAAAAAGGCACCTaGGCCGTATGGACCATGTTGCTTCTCCAGCCAGGT +
Preference number: 6 (lower is better)
Translates to: DCASLLQDEKGT*AVWTMLLLQPG
Trigger: ACCTGGCTGGAGAAGCAACATGGTCCATACGGCGCAGGTGCCTTTTTCATCCTGAAGCAGGGAGGCGCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000586786.1
ENST00000589970.5
ENST00000595407.1
CDS GCA 72 bp CTTTCTGCTCTCGTGGCCGCCAACAGAGGCCCTGAATaGGGAGGCTGTAGAGCGGACTTCAAATTTGGGGCT +
Preference number: 6 (lower is better)
Translates to: LSALVAANRGPE*GGCRADFKFGA
Trigger: AGCCCCAAATTTGAAGTCCGCTCTACAGCCTCCGCATTCAGGGCCTCTGTTGGCGGCCACGAGAGCAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS TCA 72 bp TGCCTGTCCATTAGCTCCTTGTGTCATCCCTCCCTCTaGTTGGTTAGTCGCGTCGCTCTTCGGCAGCCACTC +
Preference number: 6 (lower is better)
Translates to: CLSISSLCHPSL*LVSRVALRQPL
Trigger: GAGTGGCTGCCGAAGAGCGACGCGACTAACCAATCAGAGGGAGGGATGACACAAGGAGCTAATGGACAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS GCA 72 bp CTGGCCCCAAATTTCAACCTTACAGGACAGTGTGTGTaGGTGCGTGTGTGTGTGTGCGTGCGTGCATGCGTG +
Preference number: 6 (lower is better)
Translates to: LAPNFNLTGQCV*VRVCVCVRACV
Trigger: CACGCATGCACGCACGCACACACACACACGCACGCACACACACTGTCCTGTAAGGTTGAAATTTGGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589503.1
CDS CCA 72 bp CCCACGCTCCTGGTTCAGCGCGAACTTATTCTCCTGTaGCCACGCCCCGCGTTTTCTAACCGTCCTCTTAAA +
Preference number: 6 (lower is better)
Translates to: PTLLVQRELILL*PRPAFSNRPLK
Trigger: TTTAAGAGGACGGTTAGAAAACGCGGGGCGTGGCCACAGGAGAATAAGTTCGCGCTGAACCAGGAGCGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS CCA 72 bp TGTCCATTAGCTCCTTGTGTCATCCCTCCCTCTGATTaGTTAGTCGCGTCGCTCTTCGGCAGCCACTCCCTC +
Preference number: 6 (lower is better)
Translates to: CPLAPCVIPPSD*LVASLFGSHSL
Trigger: GAGGGAGTGGCTGCCGAAGAGCGACGCGACTAACCAATCAGAGGGAGGGATGACACAAGGAGCTAATGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS GCA 72 bp CCCCAAATTTCAACCTTACAGGACAGTGTGTGTGCGTaGGTGTGTGTGTGTGCGTGCGTGCATGCGTGCATG +
Preference number: 6 (lower is better)
Translates to: PQISTLQDSVCA*VCVCACVHACM
Trigger: CATGCACGCATGCACGCACGCACACACACACACGCACGCACACACACTGTCCTGTAAGGTTGAAATTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589503.1
CDS GCA 72 bp ATCCACTCCTTGTCTCGAAACTTGACTGCGCCTCCCTaGTTCAGGATGAAAAAGGCACCTGCGCCGTATGGA +
Preference number: 6 (lower is better)
Translates to: IHSLSRNLTAPP*FRMKKAPAPYG
Trigger: TCCATACGGCGCAGGTGCCTTTTTCATCCTGAAGCAGGGAGGCGCAGTCAAGTTTCGAGACAAGGAGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000586786.1
ENST00000589970.5
ENST00000595407.1
CDS GCA 72 bp TGGGGGCGACCAGGCGCAGGGACTTTCTTTCCTGACTaGAATTGCAGTCTCCCCAAGCTTTCTTATTCTTCC +
Preference number: 6 (lower is better)
Translates to: WGRPGAGTFFPD*NCSLPKLSYSS
Trigger: GGAAGAATAAGAAAGCTTGGGGAGACTGCAATTGCAGTCAGGAAAGAAAGTCCCTGCGCCTGGTCGCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586786.1
CDS CCA 72 bp TCCCTGCTTCAGGATGAAAAAGGCACCTGCGCCGTATaGACCATGTTGCTTCTCCAGCCAGGTGTAAGATCG +
Preference number: 6 (lower is better)
Translates to: SLLQDEKGTCAV*TMLLLQPGVRS
Trigger: CGATCTTACACCTGGCTGGAGAAGCAACATGGTCCATACGGCGCAGGTGCCTTTTTCATCCTGAAGCAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000586786.1
ENST00000589970.5
ENST00000595407.1
CDS CCA 72 bp GTGTGGCCCAAGACAATTCTTCTTCTTCGAACAGCGTaGCCCAGGGAAGCCAAAAGATTGGACACCCCTGAA +
Preference number: 6 (lower is better)
Translates to: VWPKTILLLRTA*PREAKRLDTPE
Trigger: TTCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACGCTGTTCGAAGAAGAAGAATTGTCTTGGGCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS CCA 72 bp AACCCCAGGACTCCACAATCTTTCCCTAGGAGAAGATaGGGTGTTCTTCCCGGCAGAGTACCTTTCTTTCCT +
Preference number: 6 (lower is better)
Translates to: NPRTPQSFPRRR*GVLPGRVPFFP
Trigger: AGGAAAGAAAGGTACTCTGCCGGGAAGAACACCCCATCTTCTCCTAGGGAAAGATTGTGGAGTCCTGGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS GCA 72 bp GTGCACGCACTTTTTACTCTTAAAGGGTTTAGGGATTaGTCACAGCGCCCTCTCCCTGAGCTTCAAAACGAG +
Preference number: 6 (lower is better)
Translates to: VHALFTLKGFRD*SQRPLPELQNE
Trigger: CTCGTTTTGAAGCTCAGGGAGAGGGCGCTGTGAGCAATCCCTAAACCCTTTAAGAGTAAAAAGTGCGTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS TCA 72 bp ATGGGGTGTTCTTCCCGGCAGAGTACCTTTCTTTCCTaGCTGCAATTGCAGTCTCCCCAAGCTTTCTTATTC +
Preference number: 6 (lower is better)
Translates to: MGCSSRQSTFLS*LQLQSPQAFLF
Trigger: GAATAAGAAAGCTTGGGGAGACTGCAATTGCAGTCAGGAAAGAAAGGTACTCTGCCGGGAAGAACACCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS GCA 72 bp CTTCCCGGCAGAGTACCTTTCTTTCCTGACTGCAATTaGAGTCTCCCCAAGCTTTCTTATTCTTCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: LPGRVPFFPDCN*SLPKLSYSSSF
Trigger: GAAGCTGGAAGAATAAGAAAGCTTGGGGAGACTGCAATTGCAGTCAGGAAAGAAAGGTACTCTGCCGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS GCA 72 bp GGTGTTCTTCCCGGCAGAGTACCTTTCTTTCCTGACTaGAATTGCAGTCTCCCCAAGCTTTCTTATTCTTCC +
Preference number: 6 (lower is better)
Translates to: GVLPGRVPFFPD*NCSLPKLSYSS
Trigger: GGAAGAATAAGAAAGCTTGGGGAGACTGCAATTGCAGTCAGGAAAGAAAGGTACTCTGCCGGGAAGAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597608.1
CDS CAA 90 bp CCAGGTGTAAGATCGATTTTTCTCATGCACCTTGTACATCTCCCTTaGGAGCAAGTAATCCCTCAGAGCCTCCACATCGTAGAAATAGTT +
Preference number: 6 (lower is better)
Translates to: PGVRSIFLMHLVHLP*EQVIPQSLHIVEIV
Trigger: AACTATTTCTACGATGTGGAGGCTCTGAGGGATTACTTGCTCCAAAGGGAGATGTACAAGGTGCATGAGAAAAATCGATCTTACACCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221943.14
ENST00000301183.15
ENST00000417807.7
ENST00000586786.1
ENST00000589970.5
ENST00000595407.1
CDS CAA 90 bp CTTGTCTCGAAACCGATTTTTCTCATGCACCTTGTACATCTCCCTTaGGAGCAAGTAATCCCTCAGAGCCTCCACATCGTAGAAATAGTT +
Preference number: 6 (lower is better)
Translates to: LVSKPIFLMHLVHLP*EQVIPQSLHIVEIV
Trigger: AACTATTTCTACGATGTGGAGGCTCTGAGGGATTACTTGCTCCAAAGGGAGATGTACAAGGTGCATGAGAAAAATCGGTTTCGAGACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000438807.7
ENST00000590641.6
ENST00000592922.6
ENST00000595425.5
ENST00000597457.5