RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DLX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000144355

Ensembl transcript IDs: ENST00000341900.6, ENST00000361609.4, ENST00000361725.5, ENST00000409492.1, ENST00000469444.6, ENST00000475989.2, ENST00000550686.1

Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTCTaGTGCCACTGCTCGGCCCAGGCCAGGGTTCAGGCTAGAGCGCGG +
Preference number: 1 (lower is better)
Translates to: LGCLRWQWLPSEATL*CHCSAQARVQARAR
Trigger: CCGCGCTCTAGCCTGAACCCTGGCCTGGGCCGAGCAGTGGCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CCA 90 bp ATGCCGGGAAGTTGCTGGGCCGGACCTCGCGGGGCTCCGAGGAGATaGAGGGCGTCCCGCCTCCACTGTTCCTTCTTCCCTCTGGGTCCT +
Preference number: 1 (lower is better)
Translates to: MPGSCWAGPRGAPRR*RASRLHCSFFPLGP
Trigger: AGGACCCAGAGGGAAGAAGGAACAGTGGAGGCGGGACGCCCTCCATCTCCTCGGAGCCCCGCGAGGTCCGGCCCAGCAACTTCCCGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR GCA 90 bp CCCACAAAGCTGAAGGTCGGCGGGTCGGGTGGAGCGGGTTTATCTTaGTGCTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCC +
Preference number: 1 (lower is better)
Translates to: PTKLKVGGSGGAGLS*CLGCLRWQWLPSEA
Trigger: GGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCCACCCGACCCGCCGACCTTCAGCTTTGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CCA 90 bp GGTGGAGCGGGTTTATCTTGCTGCTTGGGCTGTCTCAGGTGGCAGTaGCTTCCCTCCGAGGCCACTCTCTGCTGCCACTGCTCGGCCCAG +
Preference number: 1 (lower is better)
Translates to: GGAGLSCCLGCLRWQ*LPSEATLCCHCSAQ
Trigger: CTGGGCCGAGCAGTGGCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CCA 90 bp GGGTCGGGTGGAGCGGGTTTATCTTGCTGCTTGGGCTGTCTCAGGTaGCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCCACTGCTCG +
Preference number: 1 (lower is better)
Translates to: GSGGAGLSCCLGCLR*QWLPSEATLCCHCS
Trigger: CGAGCAGTGGCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCCACCCGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CCA 90 bp CCCCCTCCCTCCAATGCCCCCAGATTCCCACACCAGCTACACAGATaGTCAGGCAGAGTGTCCCAGGATCCGGAGATGGTCAGCCCGGCA +
Preference number: 1 (lower is better)
Translates to: PPPSNAPRFPHQLHR*SGRVSQDPEMVSPA
Trigger: TGCCGGGCTGACCATCTCCGGATCCTGGGACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGGGGGCATTGGAGGGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR GCA 90 bp ACAAAGCTGAAGGTCGGCGGGTCGGGTGGAGCGGGTTTATCTTGCTaGTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACT +
Preference number: 1 (lower is better)
Translates to: TKLKVGGSGGAGLSC*LGCLRWQWLPSEAT
Trigger: AGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCCACCCGACCCGCCGACCTTCAGCTTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CCA 90 bp ACCAGCTACACAGATGGTCAGGCAGAGTGTCCCAGGATCCGGAGATaGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCTTTT +
Preference number: 1 (lower is better)
Translates to: TSYTDGQAECPRIRR*SARQDPGRSDLVAF
Trigger: AAAAGCCACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCGGATCCTGGGACACTCTGCCTGACCATCTGTGTAGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR TCA 90 bp ACCCGGGCCGCTCAGACCTTGTGGCTTTTTGCTGAGGCCGCAGAATaGGGACAGCGGACGGATGAGGACCTGGACTTTACCAGCGCACAG +
Preference number: 1 (lower is better)
Translates to: TRAAQTLWLFAEAAE*GQRTDEDLDFTSAQ
Trigger: CTGTGCGCTGGTAAAGTCCAGGTCCTCATCCGTCCGCTGTCCTCATTCTGCGGCCTCAGCAAAAAGCCACAAGGTCTGAGCGGCCCGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR TCA 90 bp GCAACCTCACATAAGTTGGGGTTGCTGCATAGCTTCTTGGTGCGCTaGAGGGTACCACGATGTGTAGCTGGGGATATAGGAGCCCGCGTT +
Preference number: 1 (lower is better)
Translates to: ATSHKLGLLHSFLVR*RVPRCVAGDIGARV
Trigger: AACGCGGGCTCCTATATCCCCAGCTACACATCGTGGTACCCTTCAGCGCACCAAGAAGCTATGCAGCAACCCCAACTTATGTGAGGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341900.6
3UTR GCA 90 bp CCCCGTGCGCTTAAAGTAAACAGTGCGTTTGAACAGTGCGTTCCTTaGGCCCAGCAGAACCCTGAATTGGCAAACAGCCTCAGGCGAAGT +
Preference number: 1 (lower is better)
Translates to: PRALKVNSAFEQCVP*AQQNPELANSLRRS
Trigger: ACTTCGCCTGAGGCTGTTTGCCAATTCAGGGTTCTGCTGGGCGCAAGGAACGCACTGTTCAAACGCACTGTTTACTTTAAGCGCACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CCA 90 bp TTTTTGCTGAGGCCGCAGAATGAGGACAGCGGACGGATGAGGACCTaGACTTTACCAGCGCACAGACAGAGCAAAAGGAGACAGGAGACT +
Preference number: 1 (lower is better)
Translates to: FLLRPQNEDSGRMRT*TLPAHRQSKRRQET
Trigger: AGTCTCCTGTCTCCTTTTGCTCTGTCTGTGCGCTGGTAAAGTCCAGGTCCTCATCCGTCCGCTGTCCTCATTCTGCGGCCTCAGCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR GCA 90 bp TTCGTTTCTCCCCGTGCGCTTAAAGTAAACAGTGCGTTTGAACAGTaGGTTCCTTGCGCCCAGCAGAACCCTGAATTGGCAAACAGCCTC +
Preference number: 1 (lower is better)
Translates to: FVSPRALKVNSAFEQ*VPCAQQNPELANSL
Trigger: GAGGCTGTTTGCCAATTCAGGGTTCTGCTGGGCGCAAGGAACGCACTGTTCAAACGCACTGTTTACTTTAAGCGCACGGGGAGAAACGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CCA 90 bp GTGCGTTTGAACAGTGCGTTCCTTGCGCCCAGCAGAACCCTGAATTaGCAAACAGCCTCAGGCGAAGTCCATTTCTCAATAAATAAAACC +
Preference number: 1 (lower is better)
Translates to: VRLNSAFLAPSRTLN*QTASGEVHFSINKT
Trigger: GGTTTTATTTATTGAGAAATGGACTTCGCCTGAGGCTGTTTGCCAATTCAGGGTTCTGCTGGGCGCAAGGAACGCACTGTTCAAACGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR TCA 90 bp GTACAGTCATTAGATCCTGCACTGGAGATTGTGCGTTCAGGGTGGTaGCTGGCATTATTCTGTGGTCGAGCCTCTAGGGATTGTTGTAAA +
Preference number: 1 (lower is better)
Translates to: VQSLDPALEIVRSGW*LALFCGRASRDCCK
Trigger: TTTACAACAATCCCTAGAGGCTCGACCACAGAATAATGCCAGTCACCACCCTGAACGCACAATCTCCAGTGCAGGATCTAATGACTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR GCA 90 bp ATAACAATAATAATAATAACAATAATATGTACAGTCATTAGATCCTaGACTGGAGATTGTGCGTTCAGGGTGGTGACTGGCATTATTCTG +
Preference number: 1 (lower is better)
Translates to: ITIIIITIICTVIRS*TGDCAFRVVTGIIL
Trigger: CAGAATAATGCCAGTCACCACCCTGAACGCACAATCTCCAGTGCAGGATCTAATGACTGTACATATTATTGTTATTATTATTATTGTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CCA 90 bp CCCAGGATCCGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGGGGCTCCGAGGAGATaGAGGGCGTCCCGCCTCCAC +
Preference number: 2 (lower is better)
Translates to: PRIRRWSARQDPGRSDLVGAPRR*RASRLH
Trigger: GTGGAGGCGGGACGCCCTCCATCTCCTCGGAGCCCC...CACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCGGATCCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR GCA 90 bp CAGGATCCGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCGAGGCCACTCTCTGCTaGCACTGCTCGGCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: QDPEMVSPAGPGPLRPCGEATLC*HCSAQA
Trigger: GGCCTGGGCCGAGCAGTGGCAGCAGAGAGTGGCCTC...GCCACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCGGATCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CCA 90 bp CAGGATCCGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCGAGGCGGGAGGGACCTaGGCCGGGGAGACAAGAAGG +
Preference number: 2 (lower is better)
Translates to: QDPEMVSPAGPGPLRPCGEAGGT*AGETRR
Trigger: CCTTCTTGTCTCCCCGGCCCAGGTCCCTCCCGCCTC...GCCACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCGGATCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR GCA 90 bp GAGTGTCCCAGGATCCGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACTCCGAGGCCACTCTCTaGTGCCACTGCTCGGCCCAG +
Preference number: 2 (lower is better)
Translates to: ECPRIRRWSARQDPGRSDSEATL*CHCSAQ
Trigger: CTGGGCCGAGCAGTGGCAGCAGAGAGTGGCCTCGGA...GTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCGGATCCTGGGACACTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CCA 90 bp CTCGCGGGGCTCCGAGGAGATGGAGGGCGTCCCGCCTCCACTGTTCCTTCTTCCCGGGATGGATGGACCTaGAGGCGGGAGGGACCTGGG +
Preference number: 2 (lower is better)
Translates to: LAGLRGDGGRPASTVPSSRDGWT*RREGPG
Trigger: CCCAGGTCCCTCCCGCCTCCAGGTCCATCCATCCCG...GGAAGAAGGAACAGTGGAGGCGGGACGCCCTCCATCTCCTCGGAGCCCCGCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR GCA 90 bp CGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCTTTTTGCAGGCTAGAGCGCGGATaGCGGGAAGTTGCTGGGCCG +
Preference number: 2 (lower is better)
Translates to: RRWSARQDPGRSDLVAFCRLERG*REVAGP
Trigger: CGGCCCAGCAACTTCCCGGCATCCGCGCTCTAGCCT...GCAAAAAGCCACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CCA 90 bp CAGGATCCGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCCTTTTCCGGACGGGATaGATGGACCTGGAGGCGGGA +
Preference number: 2 (lower is better)
Translates to: QDPEMVSPAGPGPLRPCGLFRTG*MDLEAG
Trigger: TCCCGCCTCCAGGTCCATCCATCCCGTCCGGAAAAG...GCCACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCGGATCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CAA 90 bp ATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCTTTTaGCTGAGGCCGCAGAATGAGGACAGCGGACGGATGAGGACCTGG +
Preference number: 2 (lower is better)
Translates to: MVSPAGPGPLRPCGF*LRPQNEDSGRMRTW
Trigger: CCAGGTCCTCATCCGTCCGCTGTCCTCATTCTGCGGCCTCAGCAAAAAGCCACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CAA 90 bp AAGCTGAAGGTCGGCGGGTCGGGTGGAGCGGGTTTATCTTGCTGCTaGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTC +
Preference number: 2 (lower is better)
Translates to: KLKVGGSGGAGLSCC*GCLRWQWLPSEATL
Trigger: GAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCCACCCGACCCGCCGACCTTCAGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CCA 90 bp TGCTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCCTTTTCCGGACGGGATaGATGGACCTGGAGGCGGGA +
Preference number: 2 (lower is better)
Translates to: CLGCLRWQWLPSEATLCCLFRTG*MDLEAG
Trigger: TCCCGCCTCCAGGTCCATCCATCCCGTCCGGAAAAG...GCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR GCA 90 bp AGCGGACGGATGAGGACCTGGACTTTACCAGCGCACAGACAGAGCAAAAGGAGACGGATGCCGGGAAGTTaGTGGGCCGGACCTCGCGGG +
Preference number: 2 (lower is better)
Translates to: SGRMRTWTLPAHRQSKRRRMPGS*WAGPRG
Trigger: CCCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCG...TCTCCTTTTGCTCTGTCTGTGCGCTGGTAAAGTCCAGGTCCTCATCCGTCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CCA 90 bp TACACAGATGGTCAGGCAGAGTGTCCCAGGATCCGGAGATGGTCAGCCCGGCAGGGTCGGCGGGTCGGGTaGAGCGGGTTTATCTTGCTG +
Preference number: 2 (lower is better)
Translates to: YTDGQAECPRIRRWSARQGRRVG*SGFILL
Trigger: CAGCAAGATAAACCCGCTCCACCCGACCCGCCGACC...CTGCCGGGCTGACCATCTCCGGATCCTGGGACACTCTGCCTGACCATCTGTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR TCA 90 bp AGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTCCCAGGATCCGGAGGCTGAGGCCGCAGAATaGGGACAGCGGACGGATGAG +
Preference number: 2 (lower is better)
Translates to: RFPHQLHRWSGRVSQDPEAEAAE*GQRTDE
Trigger: CTCATCCGTCCGCTGTCCTCATTCTGCGGCCTCAGC...CTCCGGATCCTGGGACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR GCA 90 bp CAGCGGACGGATGAGGACCTGGACTTTACCAGCGCACAGACAGAGCAAAAGGAGACTCTCTGCTGCCACTaGTCGGCCCAGGCCAGGGTT +
Preference number: 2 (lower is better)
Translates to: QRTDEDLDFTSAQTEQKETLCCH*SAQARV
Trigger: AACCCTGGCCTGGGCCGAGCAGTGGCAGCAGAGAGT...CTCCTTTTGCTCTGTCTGTGCGCTGGTAAAGTCCAGGTCCTCATCCGTCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CCA 90 bp CTCCAATGCCCCCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTCGGTCGGCGGGTCGGGTaGAGCGGGTTTATCTTGCTG +
Preference number: 2 (lower is better)
Translates to: LQCPQIPTPATQMVRQSVGRRVG*SGFILL
Trigger: CAGCAAGATAAACCCGCTCCACCCGACCCGCCGACC...GACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGGGGGCATTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR GCA 90 bp GATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCTTTTTGCTGAGTGCATAGCTTCTTGGTaGGCTGAAGGGTACCACGAT +
Preference number: 2 (lower is better)
Translates to: DGQPGRTRAAQTLWLFAECIASW*AEGYHD
Trigger: ATCGTGGTACCCTTCAGCGCACCAAGAAGCTATGCA...CTCAGCAAAAAGCCACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341900.6
3UTR-3UTR GCA 90 bp TCCAATGCCCCCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTCCGCGGGTTTATCTTGCTaGTTGGGCTGTCTCAGGTGG +
Preference number: 2 (lower is better)
Translates to: SNAPRFPHQLHRWSGRVSAGLSC*LGCLRW
Trigger: CCACCTGAGACAGCCCAAGCAGCAAGATAAACCCGC...GGACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGGGGGCATTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR GCA 90 bp TCCAATGCCCCCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTCCGGAGCGGGTTTATCTTaGTGCTTGGGCTGTCTCAGG +
Preference number: 2 (lower is better)
Translates to: SNAPRFPHQLHRWSGRVSGAGLS*CLGCLR
Trigger: CCTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCC...GGACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGGGGGCATTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CCA 90 bp TCCCTCCAATGCCCCCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGGACGGATGAGGACCTaGACTTTACCAGCGCACAGA +
Preference number: 2 (lower is better)
Translates to: SLQCPQIPTPATQMVRQSGRMRT*TLPAHR
Trigger: TCTGTGCGCTGGTAAAGTCCAGGTCCTCATCCGTCC...ACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGGGGGCATTGGAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR TCA 90 bp CGGATGAGGACCTGGACTTTACCAGCGCACAGACAGAGCAAAAGGAGACAGGAGAGCTTCTTGGTGCGCTaGAGGGTACCACGATGTGTA +
Preference number: 2 (lower is better)
Translates to: RMRTWTLPAHRQSKRRQESFLVR*RVPRCV
Trigger: TACACATCGTGGTACCCTTCAGCGCACCAAGAAGCT...CTCCTGTCTCCTTTTGCTCTGTCTGTGCGCTGGTAAAGTCCAGGTCCTCATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341900.6
3UTR-3UTR GCA 90 bp ATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGACTCTCTGCTGCCACTaGTCGGCCCAGGCCAGGGTT +
Preference number: 2 (lower is better)
Translates to: ISIFLLVQAKQQSSSRNETLCCH*SAQARV
Trigger: AACCCTGGCCTGGGCCGAGCAGTGGCAGCAGAGAGT...CTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CCA 90 bp CCTTGCGCCCAGCAGAACCCTGAATTGGCAAACAGCCTCAGGCGAAGTCCATTTTGCTGCATAGCTTCTTaGTGCGCTGAAGGGTACCAC +
Preference number: 2 (lower is better)
Translates to: PCAQQNPELANSLRRSPFCCIAS*CAEGYH
Trigger: GTGGTACCCTTCAGCGCACCAAGAAGCTATGCAGCA...AAATGGACTTCGCCTGAGGCTGTTTGCCAATTCAGGGTTCTGCTGGGCGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341900.6
3UTR-3UTR TCA 90 bp CCCACTGGAATTAGAGTGCTTGTTCTCGCCTGTTTTCTCTCTACTCCCCATTTGATAGTCCCACAAAGCTaGAGGTCGGCGGGTCGGGTG +
Preference number: 2 (lower is better)
Translates to: PTGIRVLVLACFLSTPHLIVPQS*RSAGRV
Trigger: CACCCGACCCGCCGACCTTCAGCTTTGTGGGACTAT...CAAATGGGGAGTAGAGAGAAAACAGGCGAGAACAAGCACTCTAATTCCAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR TCA 90 bp AAGCCCACTGGAATTAGAGTGCTTGTTCTCGCCTGTTTTCTCTCTACTCCCCATAGGACAGCGGACGGATaGGGACCTGGACTTTACCAG +
Preference number: 2 (lower is better)
Translates to: KPTGIRVLVLACFLSTPHRTADG*GPGLYQ
Trigger: CTGGTAAAGTCCAGGTCCTCATCCGTCCGCTGTCCT...ATGGGGAGTAGAGAGAAAACAGGCGAGAACAAGCACTCTAATTCCAGTGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CCA 90 bp TTTCTACCCAAGGAGGAAATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGTGTCTCAGGTGGCAGTaGCTTCCCTCCGAGGCCACT +
Preference number: 2 (lower is better)
Translates to: FLPKEEISIFLLVQAKQQCLRWQ*LPSEAT
Trigger: AGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACA...CTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGATTTCCTCCTTGGGTAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CCA 90 bp TATAAATTAAAAATCACCACGTCCTCCTTATTCGTTTCTCCCCGTGCGCTTAAAGAGGCGGGAGGGACCTaGGCCGGGGAGACAAGAAGG +
Preference number: 2 (lower is better)
Translates to: YKLKITTSSLFVSPRALKEAGGT*AGETRR
Trigger: CCTTCTTGTCTCCCCGGCCCAGGTCCCTCCCGCCTC...TTTAAGCGCACGGGGAGAAACGAATAAGGAGGACGTGGTGATTTTTAATTTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CCA 90 bp TTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAAAATCATGTTGGCACCAGCTACACAGATaGTCAGGCAGAGTGTCCCAG +
Preference number: 2 (lower is better)
Translates to: FLSRRSNRVPPEMRKSCWHQLHR*SGRVSQ
Trigger: CTGGGACACTCTGCCTGACCATCTGTGTAGCTGGTG...CCAACATGATTTTCTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR TCA 90 bp TGTCAAGATTCTCATTTCACAAAGCATGGGGTTTTACAGCCACACACAACAGAAATAGTCCCACAAAGCTaGAGGTCGGCGGGTCGGGTG +
Preference number: 2 (lower is better)
Translates to: CQDSHFTKHGVLQPHTTEIVPQS*RSAGRV
Trigger: CACCCGACCCGCCGACCTTCAGCTTTGTGGGACTAT...TTCTGTTGTGTGTGGCTGTAAAACCCCATGCTTTGTGAAATGAGAATCTTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR TCA 90 bp ATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAGTAAACAGTGCGTTTaGACAGTGCGTTCCTTGCGC +
Preference number: 2 (lower is better)
Translates to: ISIFLLVQAKQQSSSRNESKQCV*TVRSLR
Trigger: GCGCAAGGAACGCACTGTTCAAACGCACTGTTTACT...CTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CAA 90 bp CTCGCTCCCTCTTTCTACCCAAGGAGGAAATCAGCATTTTCCTTCTaGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAAAATCA +
Preference number: 2 (lower is better)
Translates to: LAPSFYPRRKSAFSF*SRRSNRVPPEMRKS
Trigger: TGATTTTCTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGATTTCCTCCTTGGGTAGAAAGAGGGAGCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CAA 90 bp GGAATTAGAGTGCTTGTTCTCGCCTGTTTTCTCTCTACTCCCCATTaGCCCTCGCTCCCTCTTTCTACCCAAGGAGGAAATCAGCATTTT +
Preference number: 2 (lower is better)
Translates to: GIRVLVLACFLSTPH*PSLPLSTQGGNQHF
Trigger: AAAATGCTGATTTCCTCCTTGGGTAGAAAGAGGGAGCGAGGGCAAATGGGGAGTAGAGAGAAAACAGGCGAGAACAAGCACTCTAATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR GCA 90 bp CCCACTGGAATTAGAGTGCTTGTTCTCGCCTGTTTTCTCTCTACTCCCCATTTGATAAGTTGGGGTTGCTaGATAGCTTCTTGGTGCGCT +
Preference number: 2 (lower is better)
Translates to: PTGIRVLVLACFLSTPHLISWGC*IASWCA
Trigger: AGCGCACCAAGAAGCTATGCAGCAACCCCAACTTAT...CAAATGGGGAGTAGAGAGAAAACAGGCGAGAACAAGCACTCTAATTCCAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341900.6
3UTR-3UTR GCA 90 bp GTCAAGATTCTCATTTCACAAAGCATGGGGTTTTACAGCCACACACAACAGAACGAACAGTGCGTTCCTTaGGCCCAGCAGAACCCTGAA +
Preference number: 2 (lower is better)
Translates to: VKILISQSMGFYSHTQQNEQCVP*AQQNPE
Trigger: TTCAGGGTTCTGCTGGGCGCAAGGAACGCACTGTTC...GTTCTGTTGTGTGTGGCTGTAAAACCCCATGCTTTGTGAAATGAGAATCTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR GCA 90 bp TTTCTACCCAAGGAGGAAATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGCACATAAGTTGGGGTTaGTGCATAGCTTCTTGGTGC +
Preference number: 2 (lower is better)
Translates to: FLPKEEISIFLLVQAKQQHISWG*CIASWC
Trigger: GCACCAAGAAGCTATGCAGCAACCCCAACTTATGTG...CTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGATTTCCTCCTTGGGTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341900.6
3UTR-3UTR TCA 90 bp TGTCAAGATTCTCATTTCACAAAGCATGGGGTTTTACAGCCACACACAACAGAACTTGTGGCTTTTTGCTaGGGCCGCAGAATGAGGACA +
Preference number: 2 (lower is better)
Translates to: CQDSHFTKHGVLQPHTTELVAFC*GRRMRT
Trigger: TGTCCTCATTCTGCGGCCTCAGCAAAAAGCCACAAG...TTCTGTTGTGTGTGGCTGTAAAACCCCATGCTTTGTGAAATGAGAATCTTGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CCA 90 bp CATTATTCTGTGGTCGAGCCTCTAGGGATTGTTGTAAAGCTGATTTTGTCTTATACCACGATGTGTAGCTaGGGATATAGGAGCCCGCGT +
Preference number: 2 (lower is better)
Translates to: HYSVVEPLGIVVKLILSYTTMCS*GYRSPR
Trigger: ACGCGGGCTCCTATATCCCCAGCTACACATCGTGGT...ATAAGACAAAATCAGCTTTACAACAATCCCTAGAGGCTCGACCACAGAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341900.6
3UTR-3UTR CCA 90 bp GTCAAGATTCTCATTTCACAAAGCATGGGGTTTTACAGCCACACACAACAGAACGTTTATCTTGCTGCTTaGGCTGTCTCAGGTGGCAGT +
Preference number: 2 (lower is better)
Translates to: VKILISQSMGFYSHTQQNVYLAA*AVSGGS
Trigger: ACTGCCACCTGAGACAGCCCAAGCAGCAAGATAAAC...GTTCTGTTGTGTGTGGCTGTAAAACCCCATGCTTTGTGAAATGAGAATCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CCA 90 bp TATAAATTAAAAATCACCACGTCCTCCTTATTCGTTTCTCCCCGTGCGCTTAAAGTTTATCTTGCTGCTTaGGCTGTCTCAGGTGGCAGT +
Preference number: 2 (lower is better)
Translates to: YKLKITTSSLFVSPRALKVYLAA*AVSGGS
Trigger: ACTGCCACCTGAGACAGCCCAAGCAGCAAGATAAAC...TTTAAGCGCACGGGGAGAAACGAATAAGGAGGACGTGGTGATTTTTAATTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CCA 72 bp AGGGTTCAGGCTAGAGCGCGGATGCCGGGAAGTTGCTaGGCCGGACCTCGCGGGGCTCCGAGGAGATGGAGG +
Preference number: 3 (lower is better)
Translates to: RVQARARMPGSC*AGPRGAPRRWR
Trigger: CCTCCATCTCCTCGGAGCCCCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCGCGCTCTAGCCTGAACCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CCA 72 bp AGTTGCTGGGCCGGACCTCGCGGGGCTCCGAGGAGATaGAGGGCGTCCCGCCTCCACTGTTCCTTCTTCCCT +
Preference number: 3 (lower is better)
Translates to: SCWAGPRGAPRR*RASRLHCSFFP
Trigger: AGGGAAGAAGGAACAGTGGAGGCGGGACGCCCTCCATCTCCTCGGAGCCCCGCGAGGTCCGGCCCAGCAACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR GCA 72 bp AGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTaGCACTGCTCGGCCCAGGCCAGGGTTCAGGCTAGA +
Preference number: 3 (lower is better)
Translates to: RWQWLPSEATLC*HCSAQARVQAR
Trigger: TCTAGCCTGAACCCTGGCCTGGGCCGAGCAGTGGCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CAA 90 bp CCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTCCCAGGATCCGGGCGGATGCCGGGAAGTaGCTGGGCCGGACCTCGCGG +
Preference number: 3 (lower is better)
Translates to: PDSHTSYTDGQAECPRIRADAGK*LGRTSR
Trigger: CCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCGC...CCGGATCCTGGGACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CCA 72 bp ACAGATGGTCAGGCAGAGTGTCCCAGGATCCGGAGATaGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTT +
Preference number: 3 (lower is better)
Translates to: TDGQAECPRIRR*SARQDPGRSDL
Trigger: AAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCGGATCCTGGGACACTCTGCCTGACCATCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR GCA 72 bp CTGAAGGTCGGCGGGTCGGGTGGAGCGGGTTTATCTTaGTGCTTGGGCTGTCTCAGGTGGCAGTGGCTTCCC +
Preference number: 3 (lower is better)
Translates to: LKVGGSGGAGLS*CLGCLRWQWLP
Trigger: GGGAAGCCACTGCCACCTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCCACCCGACCCGCCGACCTTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CAA 90 bp AGCGGACGGATGAGGACCTGGACTTTACCAGCGCACAGACAGAGCAAAAGGAGAGCGGATGCCGGGAAGTaGCTGGGCCGGACCTCGCGG +
Preference number: 3 (lower is better)
Translates to: SGRMRTWTLPAHRQSKRRADAGK*LGRTSR
Trigger: CCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCGC...TCTCCTTTTGCTCTGTCTGTGCGCTGGTAAAGTCCAGGTCCTCATCCGTCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CCA 72 bp GGTTTATCTTGCTGCTTGGGCTGTCTCAGGTGGCAGTaGCTTCCCTCCGAGGCCACTCTCTGCTGCCACTGC +
Preference number: 3 (lower is better)
Translates to: GLSCCLGCLRWQ*LPSEATLCCHC
Trigger: GCAGTGGCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCAGCAAGATAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CCA 72 bp CTTCTTGGTGCGCTGAAGGGTACCACGATGTGTAGCTaGGGATATAGGAGCCCGCGTTTCCTCCTGAGCCCT +
Preference number: 3 (lower is better)
Translates to: LLGALKGTTMCS*GYRSPRFLLSP
Trigger: AGGGCTCAGGAGGAAACGCGGGCTCCTATATCCCCAGCTACACATCGTGGTACCCTTCAGCGCACCAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341900.6
3UTR-3UTR CAA 90 bp AAAGCTGAAGGTCGGCGGGTCGGGTGGAGCGGGTTTATCTTGCTGCTTGGGCTGGCAACCTCACATAAGTaGGGGTTGCTGCATAGCTTC +
Preference number: 3 (lower is better)
Translates to: KAEGRRVGWSGFILLLGLATSHK*GLLHSF
Trigger: GAAGCTATGCAGCAACCCCAACTTATGTGAGGTTGC...CAGCCCAAGCAGCAAGATAAACCCGCTCCACCCGACCCGCCGACCTTCAGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341900.6
3UTR-3UTR CAA 90 bp CAGCGGACGGATGAGGACCTGGACTTTACCAGCGCACAGACAGAGCAAAAGGAGTGGAGCGGGTTTATCTaGCTGCTTGGGCTGTCTCAG +
Preference number: 3 (lower is better)
Translates to: QRTDEDLDFTSAQTEQKEWSGFI*LLGLSQ
Trigger: CTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCCA...CTCCTTTTGCTCTGTCTGTGCGCTGGTAAAGTCCAGGTCCTCATCCGTCCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CAA 90 bp AGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTCCCAGGATCCGGAGTGGAGCGGGTTTATCTaGCTGCTTGGGCTGTCTCAG +
Preference number: 3 (lower is better)
Translates to: RFPHQLHRWSGRVSQDPEWSGFI*LLGLSQ
Trigger: CTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCCA...CTCCGGATCCTGGGACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CAA 90 bp GCCCAGCAGAACCCTGAATTGGCAAACAGCCTCAGGCGAAGTCCATTTCTCAATCGGGCCGCTCAGACCTaGTGGCTTTTTGCTGAGGCC +
Preference number: 3 (lower is better)
Translates to: AQQNPELANSLRRSPFLNRAAQT*WLFAEA
Trigger: GGCCTCAGCAAAAAGCCACAAGGTCTGAGCGGCCCG...ATTGAGAAATGGACTTCGCCTGAGGCTGTTTGCCAATTCAGGGTTCTGCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR TCA 72 bp GCTCAGACCTTGTGGCTTTTTGCTGAGGCCGCAGAATaGGGACAGCGGACGGATGAGGACCTGGACTTTACC +
Preference number: 3 (lower is better)
Translates to: AQTLWLFAEAAE*GQRTDEDLDFT
Trigger: GGTAAAGTCCAGGTCCTCATCCGTCCGCTGTCCTCATTCTGCGGCCTCAGCAAAAAGCCACAAGGTCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR GCA 72 bp GAGACGGGCGGGCAACCTCACATAAGTTGGGGTTGCTaGATAGCTTCTTGGTGCGCTGAAGGGTACCACGAT +
Preference number: 3 (lower is better)
Translates to: ETGGQPHISWGC*IASWCAEGYHD
Trigger: ATCGTGGTACCCTTCAGCGCACCAAGAAGCTATGCAGCAACCCCAACTTATGTGAGGTTGCCCGCCCGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341900.6
3UTR CCA 72 bp AGGCCGCAGAATGAGGACAGCGGACGGATGAGGACCTaGACTTTACCAGCGCACAGACAGAGCAAAAGGAGA +
Preference number: 3 (lower is better)
Translates to: RPQNEDSGRMRT*TLPAHRQSKRR
Trigger: TCTCCTTTTGCTCTGTCTGTGCGCTGGTAAAGTCCAGGTCCTCATCCGTCCGCTGTCCTCATTCTGCGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CAA 90 bp CTCCAATGCCCCCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTCAGACCTTGTGGCTTTTaGCTGAGGCCGCAGAATGAG +
Preference number: 3 (lower is better)
Translates to: LQCPQIPTPATQMVRQSVRPCGF*LRPQNE
Trigger: CTCATTCTGCGGCCTCAGCAAAAAGCCACAAGGTCT...GACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGGGGGCATTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR GCA 72 bp CCCCGTGCGCTTAAAGTAAACAGTGCGTTTGAACAGTaGGTTCCTTGCGCCCAGCAGAACCCTGAATTGGCA +
Preference number: 3 (lower is better)
Translates to: PRALKVNSAFEQ*VPCAQQNPELA
Trigger: TGCCAATTCAGGGTTCTGCTGGGCGCAAGGAACGCACTGTTCAAACGCACTGTTTACTTTAAGCGCACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CAA 90 bp GCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAAAACGGGCCGCTCAGACCTaGTGGCTTTTTGCTGAGGCC +
Preference number: 3 (lower is better)
Translates to: AFSFLSRRSNRVPPEMRKRAAQT*WLFAEA
Trigger: GGCCTCAGCAAAAAGCCACAAGGTCTGAGCGGCCCG...TTTTCTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CAA 90 bp GAGGAAATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAGGTTTATCTTGCTGCTaGGGCTGTCTCAGGTGGCAG +
Preference number: 3 (lower is better)
Translates to: EEISIFLLVQAKQQSSSRGLSCC*GCLRWQ
Trigger: CTGCCACCTGAGACAGCCCAAGCAGCAAGATAAACC...TCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGATTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CAA 90 bp GAGGAAATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGACAGCAGAACCCTGAATaGGCAAACAGCCTCAGGCGA +
Preference number: 3 (lower is better)
Translates to: EEISIFLLVQAKQQSSSRQQNPE*ANSLRR
Trigger: TCGCCTGAGGCTGTTTGCCAATTCAGGGTTCTGCTG...TCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGATTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR TCA 72 bp TTAGATCCTGCACTGGAGATTGTGCGTTCAGGGTGGTaGCTGGCATTATTCTGTGGTCGAGCCTCTAGGGAT +
Preference number: 3 (lower is better)
Translates to: LDPALEIVRSGW*LALFCGRASRD
Trigger: ATCCCTAGAGGCTCGACCACAGAATAATGCCAGTCACCACCCTGAACGCACAATCTCCAGTGCAGGATCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CCA 72 bp AACAGTGCGTTCCTTGCGCCCAGCAGAACCCTGAATTaGCAAACAGCCTCAGGCGAAGTCCATTTCTCAATA +
Preference number: 3 (lower is better)
Translates to: NSAFLAPSRTLN*QTASGEVHFSI
Trigger: TATTGAGAAATGGACTTCGCCTGAGGCTGTTTGCCAATTCAGGGTTCTGCTGGGCGCAAGGAACGCACTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CCA 72 bp ATCCTGCACTGGAGATTGTGCGTTCAGGGTGGTGACTaGCATTATTCTGTGGTCGAGCCTCTAGGGATTGTT +
Preference number: 3 (lower is better)
Translates to: ILHWRLCVQGGD*HYSVVEPLGIV
Trigger: AACAATCCCTAGAGGCTCGACCACAGAATAATGCCAGTCACCACCCTGAACGCACAATCTCCAGTGCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CAA 90 bp CCCACTGGAATTAGAGTGCTTGTTCTCGCCTGTTTTCTCTCTACTCCCCATTTGAGACCTTGTGGCTTTTaGCTGAGGCCGCAGAATGAG +
Preference number: 3 (lower is better)
Translates to: PTGIRVLVLACFLSTPHLRPCGF*LRPQNE
Trigger: CTCATTCTGCGGCCTCAGCAAAAAGCCACAAGGTCT...CAAATGGGGAGTAGAGAGAAAACAGGCGAGAACAAGCACTCTAATTCCAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR GCA 72 bp CTTAAAGTAAACAGTGCGTTTGAACAGTGCGTTCCTTaGGCCCAGCAGAACCCTGAATTGGCAAACAGCCTC +
Preference number: 3 (lower is better)
Translates to: LKVNSAFEQCVP*AQQNPELANSL
Trigger: GAGGCTGTTTGCCAATTCAGGGTTCTGCTGGGCGCAAGGAACGCACTGTTCAAACGCACTGTTTACTTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CAA 90 bp CCCACTGGAATTAGAGTGCTTGTTCTCGCCTGTTTTCTCTCTACTCCCCATTTGTCAGCATTTTCCTTCTaGTCCAGGCGAAGCAACAGA +
Preference number: 3 (lower is better)
Translates to: PTGIRVLVLACFLSTPHLSAFSF*SRRSNR
Trigger: TCTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGA...CAAATGGGGAGTAGAGAGAAAACAGGCGAGAACAAGCACTCTAATTCCAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR-3UTR CAA 90 bp GTCAAGATTCTCATTTCACAAAGCATGGGGTTTTACAGCCACACACAACAGAACTCACATAAGTTGGGGTaGCTGCATAGCTTCTTGGTG +
Preference number: 3 (lower is better)
Translates to: VKILISQSMGFYSHTQQNSHKLG*LHSFLV
Trigger: CACCAAGAAGCTATGCAGCAACCCCAACTTATGTGA...GTTCTGTTGTGTGTGGCTGTAAAACCCCATGCTTTGTGAAATGAGAATCTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341900.6
3UTR GCA 72 bp ATAATAATAACAATAATATGTACAGTCATTAGATCCTaGACTGGAGATTGTGCGTTCAGGGTGGTGACTGGC +
Preference number: 3 (lower is better)
Translates to: IIITIICTVIRS*TGDCAFRVVTG
Trigger: GCCAGTCACCACCCTGAACGCACAATCTCCAGTGCAGGATCTAATGACTGTACATATTATTGTTATTATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp GAGTGTCCCAGGATCCGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTCCGAGTCCGCCCCTaGGTCCTCCAGGCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ECPRIRRWSARQDPGRSDLRVRP*VLQAAL
Trigger: CAGAGCCGCCTGGAGGACCCAGGGGCGGACTCGGAG...GTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCGGATCCTGGGACACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361725.5
CDS-3UTR GCA 90 bp CCCAGGATCCGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGAGGCCACTCTCTGCTaGCACTGCTCGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PRIRRWSARQDPGRSDLVEATLC*HCSAQA
Trigger: GGCCTGGGCCGAGCAGTGGCAGCAGAGAGTGGCCTC...CACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCGGATCCTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp GATGCCGGGAAGTTGCTGGGCCGGACCTCGCGGGGCTCCGAGGAGATGGAGGGCTCCGAGGCCACTCTCTaGTGCCACTGCTCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: DAGKLLGRTSRGSEEMEGSEATL*CHCSAQ
Trigger: CTGGGCCGAGCAGTGGCAGCAGAGAGTGGCCTCGGA...GCCCTCCATCTCCTCGGAGCCCCGCGAGGTCCGGCCCAGCAACTTCCCGGCATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp GCCGGACCTCGCGGGGCTCCGAGGAGATGGAGGGCGTCCCGCCTCCACTGTTCCACAGGGCCCGACCGTTaGCCAACGCACTACCCTCCA +
Preference number: 4 (lower is better)
Translates to: AGPRGAPRRWRASRLHCSTGPDR*PTHYPP
Trigger: TGGAGGGTAGTGCGTTGGCCAACGGTCGGGCCCTGT...GGAACAGTGGAGGCGGGACGCCCTCCATCTCCTCGGAGCCCCGCGAGGTCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp GCCGGACCTCGCGGGGCTCCGAGGAGATGGAGGGCGTCCCGCCTCCACTGTTCCATAGTCCCACAAAGCTaGAGGTCGGCGGGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: AGPRGAPRRWRASRLHCSIVPQS*RSAGRV
Trigger: CACCCGACCCGCCGACCTTCAGCTTTGTGGGACTAT...GGAACAGTGGAGGCGGGACGCCCTCCATCTCCTCGGAGCCCCGCGAGGTCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp GCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCCACTGCTCGGCCCAGGCCAGTCCGAGGCCACTCTCTaGTGCCACTGCTCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: AVASLRGHSLLPLLGPGQSEATL*CHCSAQ
Trigger: CTGGGCCGAGCAGTGGCAGCAGAGAGTGGCCTCGGA...CTGGCCTGGGCCGAGCAGTGGCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TTCTTTTCCGGACGGGATGGATGGACCTGGAGGCGGGAGGGACCTGGGCCGGGGCCCAGGATCCGGAGATaGTCAGCCCGGCAGGACCCG +
Preference number: 4 (lower is better)
Translates to: FFSGRDGWTWRREGPGPGPRIRR*SARQDP
Trigger: CGGGTCCTGCCGGGCTGACCATCTCCGGATCCTGGG...CCCCGGCCCAGGTCCCTCCCGCCTCCAGGTCCATCCATCCCGTCCGGAAAAGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp CAGGATCCGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCCCGTCGGGCTGCGAATaGCCCGCCGAGTGTAAACAG +
Preference number: 4 (lower is better)
Translates to: QDPEMVSPAGPGPLRPCGPSGCE*PAECKQ
Trigger: CTGTTTACACTCGGCGGGCCATTCGCAGCCCGACGG...GCCACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCGGATCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp GCCGGACCTCGCGGGGCTCCGAGGAGATGGAGGGCGTCCCGCCTCCACTGTTCCGCCGCTCAGACCTTGTaGCTTTTTGCTGAGGCCGCA +
Preference number: 4 (lower is better)
Translates to: AGPRGAPRRWRASRLHCSAAQTL*LFAEAA
Trigger: TGCGGCCTCAGCAAAAAGCCACAAGGTCTGAGCGGC...GGAACAGTGGAGGCGGGACGCCCTCCATCTCCTCGGAGCCCCGCGAGGTCCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp CGGGGCTCCGAGGAGATGGAGGGCGTCCCGCCTCCACTGTTCCTTCTTCCCTCTAGGCTAGAGCGCGGATaGCGGGAAGTTGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: RGSEEMEGVPPPLFLLPSRLERG*REVAGP
Trigger: CGGCCCAGCAACTTCCCGGCATCCGCGCTCTAGCCT...AGAGGGAAGAAGGAACAGTGGAGGCGGGACGCCCTCCATCTCCTCGGAGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp GATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCTTTTTGCTGAGGAGGCCACTCTCTGCTaGCACTGCTCGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: DGQPGRTRAAQTLWLFAEEATLC*HCSAQA
Trigger: GGCCTGGGCCGAGCAGTGGCAGCAGAGAGTGGCCTC...CTCAGCAAAAAGCCACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp GCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCCACTGCTCGGCCCAGGCCAGACCCCCTCCCTCCAATaGCCCCAGATTCCCACACCA +
Preference number: 4 (lower is better)
Translates to: AVASLRGHSLLPLLGPGQTPSLQ*PQIPTP
Trigger: TGGTGTGGGAATCTGGGGGCATTGGAGGGAGGGGGT...CTGGCCTGGGCCGAGCAGTGGCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp GAGTGTCCCAGGATCCGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCGCGGGGTCTGGGTGTaGGACTTTCTCTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ECPRIRRWSARQDPGRSDRGVWV*DFLSSA
Trigger: AGCAGAGGAGAGAAAGTCCCACACCCAGACCCCGCG...GTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCGGATCCTGGGACACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp GATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCTTTTTGCTGAGGAGGCGGGAGGGACCTaGGCCGGGGAGACAAGAAGG +
Preference number: 4 (lower is better)
Translates to: DGQPGRTRAAQTLWLFAEEAGGT*AGETRR
Trigger: CCTTCTTGTCTCCCCGGCCCAGGTCCCTCCCGCCTC...CTCAGCAAAAAGCCACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TGCTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCCGGGATGGATGGACCTaGAGGCGGGAGGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: CLGCLRWQWLPSEATLCCRDGWT*RREGPG
Trigger: CCCAGGTCCCTCCCGCCTCCAGGTCCATCCATCCCG...GCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp AGGCTAGAGCGCGGATGCCGGGAAGTTGCTGGGCCGGACCTCGCGGGGCTCCGACTGCACTGGAGATTGTaGGTTCAGGGTGGTGACTGG +
Preference number: 4 (lower is better)
Translates to: RLERGCREVAGPDLAGLRLHWRL*VQGGDW
Trigger: CCAGTCACCACCCTGAACGCACAATCTCCAGTGCAG...TCGGAGCCCCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCGCGCTCTAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TGGGTCCTTCTTTTCCGGACGGGATGGATGGACCTGGAGGCGGGAGGGACCTGGTCCGGACGGGATGGATaGACCTGGAGGCGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: WVLLFRTGWMDLEAGGTWSGRDG*TWRREG
Trigger: TCCCTCCCGCCTCCAGGTCCATCCATCCCGTCCGGA...CCAGGTCCCTCCCGCCTCCAGGTCCATCCATCCCGTCCGGAAAAGAAGGACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp AGGCTAGAGCGCGGATGCCGGGAAGTTGCTGGGCCGGACCTCGCGGGGCTCCGAGGACGGATGAGGACCTaGACTTTACCAGCGCACAGA +
Preference number: 4 (lower is better)
Translates to: RLERGCREVAGPDLAGLRGRMRT*TLPAHR
Trigger: TCTGTGCGCTGGTAAAGTCCAGGTCCTCATCCGTCC...TCGGAGCCCCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCGCGCTCTAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp GCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCCACTGCTCGGCCCAGGCCAGGCCGCTCAGACCTTGTaGCTTTTTGCTGAGGCCGCA +
Preference number: 4 (lower is better)
Translates to: AVASLRGHSLLPLLGPGQAAQTL*LFAEAA
Trigger: TGCGGCCTCAGCAAAAAGCCACAAGGTCTGAGCGGC...CTGGCCTGGGCCGAGCAGTGGCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CAA 72 bp CCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCTTTTaGCTGAGGCCGCAGAATGAGGACAGCGGACGGATG +
Preference number: 4 (lower is better)
Translates to: PAGPGPLRPCGF*LRPQNEDSGRM
Trigger: CATCCGTCCGCTGTCCTCATTCTGCGGCCTCAGCAAAAAGCCACAAGGTCTGAGCGGCCCGGGTCCTGCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp GCCGGACCTCGCGGGGCTCCGAGGAGATGGAGGGCGTCCCGCCTCCACTGTTCCAGTAAACAGTGCGTTTaGACAGTGCGTTCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: AGPRGAPRRWRASRLHCSSKQCV*TVRSLR
Trigger: GCGCAAGGAACGCACTGTTCAAACGCACTGTTTACT...GGAACAGTGGAGGCGGGACGCCCTCCATCTCCTCGGAGCCCCGCGAGGTCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp CTCGCGGGGCTCCGAGGAGATGGAGGGCGTCCCGCCTCCACTGTTCCTTCTTCCGGCAGAGCTAGGTACTaGGTTTGCTGGAACCTCCGG +
Preference number: 4 (lower is better)
Translates to: LAGLRGDGGRPASTVPSSGRARY*VCWNLR
Trigger: CCGGAGGTTCCAGCAAACTCAGTACCTAGCTCTGCC...GGAAGAAGGAACAGTGGAGGCGGGACGCCCTCCATCTCCTCGGAGCCCCGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361725.5
CDS-3UTR GCA 90 bp CTCGCGGGGCTCCGAGGAGATGGAGGGCGTCCCGCCTCCACTGTTCCTTCTTCCGATGTAGGGGCTGGATaGGTGGCTGCTGACCGAGTT +
Preference number: 4 (lower is better)
Translates to: LAGLRGDGGRPASTVPSSDVGAG*VAADRV
Trigger: AACTCGGTCAGCAGCCACGCATCCAGCCCCTACATC...GGAAGAAGGAACAGTGGAGGCGGGACGCCCTCCATCTCCTCGGAGCCCCGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp AGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTCCCAGGATCCGGAGGGGCGAGGCTGGCGCTaGCCGGGTAGGACTGCACCG +
Preference number: 4 (lower is better)
Translates to: RFPHQLHRWSGRVSQDPEGRGWR*PGRTAP
Trigger: CGGTGCAGTCCTACCCGGGCAGCGCCAGCCTCGCCC...CTCCGGATCCTGGGACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp CCCAGGATCCGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCGGGTTTATCTTGCTaGTTGGGCTGTCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PRIRRWSARQDPGRSDLVAGLSC*LGCLRW
Trigger: CCACCTGAGACAGCCCAAGCAGCAAGATAAACCCGC...CACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCGGATCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp AGGGTTCAGGCTAGAGCGCGGATGCCGGGAAGTTGCTGGGCCGGACCTCGCGGGGGAGCGGGTTTATCTTaGTGCTTGGGCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RVQARARMPGSCWAGPRGGAGLS*CLGCLR
Trigger: CCTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCC...CCCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCGCGCTCTAGCCTGAACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp CCCAGGATCCGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGAACAGTGCGTTCCTTaGGCCCAGCAGAACCCTGAA +
Preference number: 4 (lower is better)
Translates to: PRIRRWSARQDPGRSDLVEQCVP*AQQNPE
Trigger: TTCAGGGTTCTGCTGGGCGCAAGGAACGCACTGTTC...CACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCGGATCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp AGGGTTCAGGCTAGAGCGCGGATGCCGGGAAGTTGCTGGGCCGGACCTCGCGGGGAACAGTGCGTTCCTTaGGCCCAGCAGAACCCTGAA +
Preference number: 4 (lower is better)
Translates to: RVQARARMPGSCWAGPRGEQCVP*AQQNPE
Trigger: TTCAGGGTTCTGCTGGGCGCAAGGAACGCACTGTTC...CCCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCGCGCTCTAGCCTGAACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp GCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCCACTGCTCGGCCCAGGCCAGGAAGGAGACATTTGCTaGTTGGGCGGCCCAAACTCC +
Preference number: 4 (lower is better)
Translates to: AVASLRGHSLLPLLGPGQEGDIC*LGGPNS
Trigger: GGAGTTTGGGCCGCCCAACCAGCAAATGTCTCCTTC...CTGGCCTGGGCCGAGCAGTGGCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp CGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCTTTTTGCTGTCTCAGGTGGCAGTaGCTTCCCTCCGAGGCCACT +
Preference number: 4 (lower is better)
Translates to: RRWSARQDPGRSDLVAFCCLRWQ*LPSEAT
Trigger: AGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACA...GCAAAAAGCCACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp CCCAGGATCCGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGGACGGATGAGGACCTaGACTTTACCAGCGCACAGA +
Preference number: 4 (lower is better)
Translates to: PRIRRWSARQDPGRSDLVGRMRT*TLPAHR
Trigger: TCTGTGCGCTGGTAAAGTCCAGGTCCTCATCCGTCC...CACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCGGATCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp CAGGATCCGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCCACCAGCTACACAGATaGTCAGGCAGAGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: QDPEMVSPAGPGPLRPCGHQLHR*SGRVSQ
Trigger: CTGGGACACTCTGCCTGACCATCTGTGTAGCTGGTG...GCCACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCGGATCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CAA 72 bp GCTGAAGGTCGGCGGGTCGGGTGGAGCGGGTTTATCTaGCTGCTTGGGCTGTCTCAGGTGGCAGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: AEGRRVGWSGFI*LLGLSQVAVAS
Trigger: GGAAGCCACTGCCACCTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCCACCCGACCCGCCGACCTTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp TCGGCGGGTCGGGTGGAGCGGGTTTATCTTGCTGCTTGGGCTGTCTCAGGTGGCATAGTCCCACAAAGCTaGAGGTCGGCGGGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: SAGRVERVYLAAWAVSGGIVPQS*RSAGRV
Trigger: CACCCGACCCGCCGACCTTCAGCTTTGTGGGACTAT...GCCACCTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCCACCCGACCCGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp CGGGGCTCCGAGGAGATGGAGGGCGTCCCGCCTCCACTGTTCCTTCTTCCCTCTAGGACAGCGGACGGATaGGGACCTGGACTTTACCAG +
Preference number: 4 (lower is better)
Translates to: RGSEEMEGVPPPLFLLPSRTADG*GPGLYQ
Trigger: CTGGTAAAGTCCAGGTCCTCATCCGTCCGCTGTCCT...AGAGGGAAGAAGGAACAGTGGAGGCGGGACGCCCTCCATCTCCTCGGAGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp AGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTCCCAGGATCCGGAGCGGATGCCGGGAAGTTaGTGGGCCGGACCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: RFPHQLHRWSGRVSQDPERMPGS*WAGPRG
Trigger: CCCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCG...CTCCGGATCCTGGGACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCCACTCGCGGGGTCTGGGTGTaGGACTTTCTCTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: WAVSGGSGFPPRPLSAATRGVWV*DFLSSA
Trigger: AGCAGAGGAGAGAAAGTCCCACACCCAGACCCCGCG...AGTGGCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp AGGCTAGAGCGCGGATGCCGGGAAGTTGCTGGGCCGGACCTCGCGGGGCTCCGAAGTGTAAACAGTGCATaGAGTAGTGCCCGTGGGACA +
Preference number: 4 (lower is better)
Translates to: RLERGCREVAGPDLAGLRSVNSA*SSARGT
Trigger: TGTCCCACGGGCACTACTCCATGCACTGTTTACACT...TCGGAGCCCCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCGCGCTCTAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp CGGATGAGGACCTGGACTTTACCAGCGCACAGACAGAGCAAAAGGAGACAGGAGTCCTCCAGGCGGCTCTaGGCGAGGCTGGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RMRTWTLPAHRQSKRRQESSRRL*ARLALP
Trigger: GGGCAGCGCCAGCCTCGCCCAGAGCCGCCTGGAGGA...CTCCTGTCTCCTTTTGCTCTGTCTGTGCGCTGGTAAAGTCCAGGTCCTCATCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TCGGCGGGTCGGGTGGAGCGGGTTTATCTTGCTGCTTGGGCTGTCTCAGGTGGCCTTTTCCGGACGGGATaGATGGACCTGGAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SAGRVERVYLAAWAVSGGLFRTG*MDLEAG
Trigger: TCCCGCCTCCAGGTCCATCCATCCCGTCCGGAAAAG...GCCACCTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCCACCCGACCCGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp CAGCGGACGGATGAGGACCTGGACTTTACCAGCGCACAGACAGAGCAAAAGGAGGGAGAAGGACGAGGCTaGGCTGTAGGCGCCGTCGGG +
Preference number: 4 (lower is better)
Translates to: QRTDEDLDFTSAQTEQKEGEGRG*AVGAVG
Trigger: CCCGACGGCGCCTACAGCTCAGCCTCGTCCTTCTCC...CTCCTTTTGCTCTGTCTGTGCGCTGGTAAAGTCCAGGTCCTCATCCGTCCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp CGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCTTTTTGCGGAGCGGGTTTATCTTaGTGCTTGGGCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RRWSARQDPGRSDLVAFCGAGLS*CLGCLR
Trigger: CCTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCC...GCAAAAAGCCACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TCGGCGGGTCGGGTGGAGCGGGTTTATCTTGCTGCTTGGGCTGTCTCAGGTGGCTCTTCTCGCGGGGTCTaGGTGTGGGACTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SAGRVERVYLAAWAVSGGSSRGV*VWDFLS
Trigger: GGAGAGAAAGTCCCACACCCAGACCCCGCGAGAAGA...GCCACCTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCCACCCGACCCGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TCGGCGGGTCGGGTGGAGCGGGTTTATCTTGCTGCTTGGGCTGTCTCAGGTGGCCTGGCATGGTGGTCATaGTCATCTCTTCTCGCGGGG +
Preference number: 4 (lower is better)
Translates to: SAGRVERVYLAAWAVSGGLAWWS*SSLLAG
Trigger: CCCCGCGAGAAGAGATGACCATGACCACCATGCCAG...GCCACCTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCCACCCGACCCGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TCCCTCCAATGCCCCCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTATGCCGGGAAGTTGCTaGGCCGGACCTCGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: SLQCPQIPTPATQMVRQSMPGSC*AGPRGA
Trigger: AGCCCCGCGAGGTCCGGCCCAGCAACTTCCCGGCAT...ACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGGGGGCATTGGAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp CGGGGCTCCGAGGAGATGGAGGGCGTCCCGCCTCCACTGTTCCTTCTTCCCTCTCTTGTGGCTTTTTGCTaGGGCCGCAGAATGAGGACA +
Preference number: 4 (lower is better)
Translates to: RGSEEMEGVPPPLFLLPSLVAFC*GRRMRT
Trigger: TGTCCTCATTCTGCGGCCTCAGCAAAAAGCCACAAG...AGAGGGAAGAAGGAACAGTGGAGGCGGGACGCCCTCCATCTCCTCGGAGCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp GATGAAGAGTTAGGGTTCCAGCCGGGCGGCACGGGTGGGGAGCCAGCAGACAGGGGACTTTCTCTCCTCTaGTTCCCTTTTGGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: DEELGFQPGGTGGEPADRGLSLL*FPFGGL
Trigger: GAGACCCCCAAAAGGGAAGCAGAGGAGAGAAAGTCC...CCTGTCTGCTGGCTCCCCACCCGTGCCGCCCGGCTGGAACCCTAACTCTTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000341900.6
CDS-3UTR GCA 90 bp CTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCCAAGAGCCGCCCCACCCTaGTTCATCAGCTTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: LGLSQVAVASLRGHSLLPRAAPP*FISFLN
Trigger: GTTCAAGAAGCTGATGAAGCAGGGTGGGGCGGCTCT...TGGCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp TCCTGCACTGGAGATTGTGCGTTCAGGGTGGTGACTGGCATTATTCTGTGGTCGCGGATGCCGGGAAGTTaGTGGGCCGGACCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: SCTGDCAFRVVTGIILWSRMPGS*WAGPRG
Trigger: CCCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCG...CGACCACAGAATAATGCCAGTCACCACCCTGAACGCACAATCTCCAGTGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp TCCCTCCAATGCCCCCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTAGGCTAGAGCGCGGATaGCGGGAAGTTGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: SLQCPQIPTPATQMVRQSRLERG*REVAGP
Trigger: CGGCCCAGCAACTTCCCGGCATCCGCGCTCTAGCCT...ACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGGGGGCATTGGAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp CTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCCACTGCTCAGTGCGTTTGAACAGTaGGTTCCTTGCGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LSQVAVASLRGHSLLPLLSAFEQ*VPCAQQ
Trigger: CTGCTGGGCGCAAGGAACGCACTGTTCAAACGCACT...GAGCAGTGGCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp CGCGGATGCCGGGAAGTTGCTGGGCCGGACCTCGCGGGGCTCCGAGGAGATGGAACAGTCATTAGATCCTaGACTGGAGATTGTGCGTTC +
Preference number: 4 (lower is better)
Translates to: RGCREVAGPDLAGLRGDGTVIRS*TGDCAF
Trigger: GAACGCACAATCTCCAGTGCAGGATCTAATGACTGT...TCCATCTCCTCGGAGCCCCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TTTCCTGATAGTCCCACAAAGCTGAAGGTCGGCGGGTCGGGTGGAGCGGGTTTATCCGGACGGGATGGATaGACCTGGAGGCGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: FPDSPTKLKVGGSGGAGLSGRDG*TWRREG
Trigger: TCCCTCCCGCCTCCAGGTCCATCCATCCCGTCCGGA...TAAACCCGCTCCACCCGACCCGCCGACCTTCAGCTTTGTGGGACTATCAGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TCCTGCACTGGAGATTGTGCGTTCAGGGTGGTGACTGGCATTATTCTGTGGTCGGGGGCTCCGAGGAGATaGAGGGCGTCCCGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SCTGDCAFRVVTGIILWSGAPRR*RASRLH
Trigger: GTGGAGGCGGGACGCCCTCCATCTCCTCGGAGCCCC...CGACCACAGAATAATGCCAGTCACCACCCTGAACGCACAATCTCCAGTGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp CGGGTTTATCTTGCTGCTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGTTTGGAACCAGATCTTaGCCTGGGTCCTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RVYLAAWAVSGGSGFPPRFGTRS*PGSSRR
Trigger: CCGCCTGGAGGACCCAGGTCAAGATCTGGTTCCAAA...CCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCAGCAAGATAAACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341900.6
CDS-3UTR TCA 90 bp CGGGTTTATCTTGCTGCTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCGCCCAGCAGAACCCTaGATTGGCAAACAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RVYLAAWAVSGGSGFPPRRPAEP*IGKQPQ
Trigger: CTGAGGCTGTTTGCCAATTCAGGGTTCTGCTGGGCG...CCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCAGCAAGATAAACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp GGACCTGGGCCGGGGAGACAAGAAGGAGACGGGCGGGCAACCTCACATAAGTTGAGAGCCGCCCCACCCTaGTTCATCAGCTTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: GPGPGRQEGDGRATSHKLRAAPP*FISFLN
Trigger: GTTCAAGAAGCTGATGAAGCAGGGTGGGGCGGCTCT...CAACTTATGTGAGGTTGCCCGCCCGTCTCCTTCTTGTCTCCCCGGCCCAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341900.6
CDS-3UTR CCA 90 bp ATCTTGCTGCTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTTCTTCTCGCGGGGTCTaGGTGTGGGACTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ILLLGLSQVAVASLRGHSSSRGV*VWDFLS
Trigger: GGAGAGAAAGTCCCACACCCAGACCCCGCGAGAAGA...AGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCAGCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TTCTTTTCCGGACGGGATGGATGGACCTGGAGGCGGGAGGGACCTGGGCCGGGGGACTTTCTGGCATGGTaGTCATGGTCATCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: FFSGRDGWTWRREGPGPGDFLAW*SWSSLL
Trigger: GAGAAGAGATGACCATGACCACCATGCCAGAAAGTC...CCCCGGCCCAGGTCCCTCCCGCCTCCAGGTCCATCCATCCCGTCCGGAAAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp CAGGGTGGTGACTGGCATTATTCTGTGGTCGAGCCTCTAGGGATTGTTGTAAAGTCCTCCAGGCGGCTCTaGGCGAGGCTGGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QGGDWHYSVVEPLGIVVKSSRRL*ARLALP
Trigger: GGGCAGCGCCAGCCTCGCCCAGAGCCGCCTGGAGGA...CTTTACAACAATCCCTAGAGGCTCGACCACAGAATAATGCCAGTCACCACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp CGCGGATGCCGGGAAGTTGCTGGGCCGGACCTCGCGGGGCTCCGAGGAGATGGATCATTTCACAAAGCATaGGGTTTTACAGCCACACAC +
Preference number: 4 (lower is better)
Translates to: RGCREVAGPDLAGLRGDGSFHKA*GFTATH
Trigger: GTGTGTGGCTGTAAAACCCCATGCTTTGTGAAATGA...TCCATCTCCTCGGAGCCCCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp GTTCCTTGCGCCCAGCAGAACCCTGAATTGGCAAACAGCCTCAGGCGAAGTCCACCGACACGGGGCTGTTaGGACTTTCTGGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: VPCAQQNPELANSLRRSPPTRGC*DFLAWW
Trigger: CCACCATGCCAGAAAGTCTCAACAGCCCCGTGTCGG...TGGACTTCGCCTGAGGCTGTTTGCCAATTCAGGGTTCTGCTGGGCGCAAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp CGGATGAGGACCTGGACTTTACCAGCGCACAGACAGAGCAAAAGGAGACAGGAGGCTGAGGCCGCAGAATaGGGACAGCGGACGGATGAG +
Preference number: 4 (lower is better)
Translates to: RMRTWTLPAHRQSKRRQEAEAAE*GQRTDE
Trigger: CTCATCCGTCCGCTGTCCTCATTCTGCGGCCTCAGC...CTCCTGTCTCCTTTTGCTCTGTCTGTGCGCTGGTAAAGTCCAGGTCCTCATCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp CCTTGCGCCCAGCAGAACCCTGAATTGGCAAACAGCCTCAGGCGAAGTCCATTTACTCTCTGCTGCCACTaGTCGGCCCAGGCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: PCAQQNPELANSLRRSPFTLCCH*SAQARV
Trigger: AACCCTGGCCTGGGCCGAGCAGTGGCAGCAGAGAGT...AAATGGACTTCGCCTGAGGCTGTTTGCCAATTCAGGGTTCTGCTGGGCGCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp CAGCGGACGGATGAGGACCTGGACTTTACCAGCGCACAGACAGAGCAAAAGGAGACCCCCTCCCTCCAATaGCCCCAGATTCCCACACCA +
Preference number: 4 (lower is better)
Translates to: QRTDEDLDFTSAQTEQKETPSLQ*PQIPTP
Trigger: TGGTGTGGGAATCTGGGGGCATTGGAGGGAGGGGGT...CTCCTTTTGCTCTGTCTGTGCGCTGGTAAAGTCCAGGTCCTCATCCGTCCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp CCTTGCGCCCAGCAGAACCCTGAATTGGCAAACAGCCTCAGGCGAAGTCCATTTCCGTCGGGCTGCGAATaGCCCGCCGAGTGTAAACAG +
Preference number: 4 (lower is better)
Translates to: PCAQQNPELANSLRRSPFPSGCE*PAECKQ
Trigger: CTGTTTACACTCGGCGGGCCATTCGCAGCCCGACGG...AAATGGACTTCGCCTGAGGCTGTTTGCCAATTCAGGGTTCTGCTGGGCGCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp ATCTTGCTGCTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTACCACGATGTGTAGCTaGGGATATAGGAGCCCGCGT +
Preference number: 4 (lower is better)
Translates to: ILLLGLSQVAVASLRGHSTTMCS*GYRSPR
Trigger: ACGCGGGCTCCTATATCCCCAGCTACACATCGTGGT...AGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCAGCAAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp TCCCTCCAATGCCCCCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTAGGACAGCGGACGGATaGGGACCTGGACTTTACCAG +
Preference number: 4 (lower is better)
Translates to: SLQCPQIPTPATQMVRQSRTADG*GPGLYQ
Trigger: CTGGTAAAGTCCAGGTCCTCATCCGTCCGCTGTCCT...ACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGGGGGCATTGGAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp TTTCCTGATAGTCCCACAAAGCTGAAGGTCGGCGGGTCGGGTGGAGCGGGTTTACGCCCAGCAGAACCCTaGATTGGCAAACAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: FPDSPTKLKVGGSGGAGLRPAEP*IGKQPQ
Trigger: CTGAGGCTGTTTGCCAATTCAGGGTTCTGCTGGGCG...TAAACCCGCTCCACCCGACCCGCCGACCTTCAGCTTTGTGGGACTATCAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp CTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCCACTGCTCAACCAGATCTTGACCTaGGTCTGTGTGAGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LSQVAVASLRGHSLLPLLNQILT*VCVSPK
Trigger: TTTGGGACTCACACAGACTCAGGTCAAGATCTGGTT...GAGCAGTGGCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361725.5
CDS-3UTR GCA 90 bp TTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAAAATCATGTTGGGGGCGAGGCTGGCGCTaGCCGGGTAGGACTGCACCG +
Preference number: 4 (lower is better)
Translates to: FLSRRSNRVPPEMRKSCWGRGWR*PGRTAP
Trigger: CGGTGCAGTCCTACCCGGGCAGCGCCAGCCTCGCCC...CCAACATGATTTTCTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp TGCTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCATAAGTTGGGGTTGCTaGATAGCTTCTTGGTGCGCT +
Preference number: 4 (lower is better)
Translates to: CLGCLRWQWLPSEATLCCISWGC*IASWCA
Trigger: AGCGCACCAAGAAGCTATGCAGCAACCCCAACTTAT...GCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp TGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCCACTCACATAAGTTGGGGTTaGTGCATAGCTTCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: WAVSGGSGFPPRPLSAATHISWG*CIASWC
Trigger: GCACCAAGAAGCTATGCAGCAACCCCAACTTATGTG...AGTGGCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp CTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCCAGCTGTTGAGACTTTCTaGCATGGTGGTCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: LGLSQVAVASLRGHSLLPAVETF*HGGHGH
Trigger: ATGACCATGACCACCATGCCAGAAAGTCTCAACAGC...TGGCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp ATCTTGCTGCTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTAGTGCCCGTGGGACATaGGAGAAGGAGACATTTGCT +
Preference number: 4 (lower is better)
Translates to: ILLLGLSQVAVASLRGHSSARGT*EKETFA
Trigger: AGCAAATGTCTCCTTCTCCCATGTCCCACGGGCACT...AGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCAGCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TACACAGATGGTCAGGCAGAGTGTCCCAGGATCCGGAGATGGTCAGCCCGGCAGTGCTGCATAGCTTCTTaGTGCGCTGAAGGGTACCAC +
Preference number: 4 (lower is better)
Translates to: YTDGQAECPRIRRWSARQCCIAS*CAEGYH
Trigger: GTGGTACCCTTCAGCGCACCAAGAAGCTATGCAGCA...CTGCCGGGCTGACCATCTCCGGATCCTGGGACACTCTGCCTGACCATCTGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp TGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCCACTGAGTTCCTCCCGAAATaGGAAAATCATGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: WAVSGGSGFPPRPLSAATEFLPK*ENHVGF
Trigger: GAAGCCAACATGATTTTCTCATTTCGGGAGGAACTC...AGTGGCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp CCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTCCCAGGATCCGGGTGCGTTCAGGGTGGTaGCTGGCATTATTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PDSHTSYTDGQAECPRIRVRSGW*LALFCG
Trigger: ACCACAGAATAATGCCAGTCACCACCCTGAACGCAC...CCGGATCCTGGGACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp AGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTCCCAGGATCCGGAGGCGGGTTTATCTTGCTaGTTGGGCTGTCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RFPHQLHRWSGRVSQDPEAGLSC*LGCLRW
Trigger: CCACCTGAGACAGCCCAAGCAGCAAGATAAACCCGC...CTCCGGATCCTGGGACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp TTTCCTGATAGTCCCACAAAGCTGAAGGTCGGCGGGTCGGGTGGAGCGGGTTTACTGCACTGGAGATTGTaGGTTCAGGGTGGTGACTGG +
Preference number: 4 (lower is better)
Translates to: FPDSPTKLKVGGSGGAGLLHWRL*VQGGDW
Trigger: CCAGTCACCACCCTGAACGCACAATCTCCAGTGCAG...TAAACCCGCTCCACCCGACCCGCCGACCTTCAGCTTTGTGGGACTATCAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp ATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGATGCCGGGAAGTTGCTaGGCCGGACCTCGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: ISIFLLVQAKQQSSSRNEMPGSC*AGPRGA
Trigger: AGCCCCGCGAGGTCCGGCCCAGCAACTTCCCGGCAT...CTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TACACAGATGGTCAGGCAGAGTGTCCCAGGATCCGGAGATGGTCAGCCCGGCAGAGCAGAACCCTGAATTaGCAAACAGCCTCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: YTDGQAECPRIRRWSARQSRTLN*QTASGE
Trigger: TTCGCCTGAGGCTGTTTGCCAATTCAGGGTTCTGCT...CTGCCGGGCTGACCATCTCCGGATCCTGGGACACTCTGCCTGACCATCTGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TTTCCTGATAGTCCCACAAAGCTGAAGGTCGGCGGGTCGGGTGGAGCGGGTTTAAGTGCCCGTGGGACATaGGAGAAGGAGACATTTGCT +
Preference number: 4 (lower is better)
Translates to: FPDSPTKLKVGGSGGAGLSARGT*EKETFA
Trigger: AGCAAATGTCTCCTTCTCCCATGTCCCACGGGCACT...TAAACCCGCTCCACCCGACCCGCCGACCTTCAGCTTTGTGGGACTATCAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp CCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTCCCAGGATCCGGAGTGTAAACAGTGCATaGAGTAGTGCCCGTGGGACA +
Preference number: 4 (lower is better)
Translates to: PDSHTSYTDGQAECPRIRSVNSA*SSARGT
Trigger: TGTCCCACGGGCACTACTCCATGCACTGTTTACACT...CCGGATCCTGGGACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TCCTGCACTGGAGATTGTGCGTTCAGGGTGGTGACTGGCATTATTCTGTGGTCGAACCAGATCTTGACCTaGGTCCTCCAGGCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SCTGDCAFRVVTGIILWSNQILT*VLQAAL
Trigger: CAGAGCCGCCTGGAGGACCCAGGTCAAGATCTGGTT...CGACCACAGAATAATGCCAGTCACCACCCTGAACGCACAATCTCCAGTGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341900.6
CDS-3UTR CCA 90 bp GAGGAAATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAACAGGGCCCGACCGTTaGCCAACGCACTACCCTCCA +
Preference number: 4 (lower is better)
Translates to: EEISIFLLVQAKQQSSSRTGPDR*PTHYPP
Trigger: TGGAGGGTAGTGCGTTGGCCAACGGTCGGGCCCTGT...TCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGATTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp CAGCGGACGGATGAGGACCTGGACTTTACCAGCGCACAGACAGAGCAAAAGGAGTGCTGCATAGCTTCTTaGTGCGCTGAAGGGTACCAC +
Preference number: 4 (lower is better)
Translates to: QRTDEDLDFTSAQTEQKECCIAS*CAEGYH
Trigger: GTGGTACCCTTCAGCGCACCAAGAAGCTATGCAGCA...CTCCTTTTGCTCTGTCTGTGCGCTGGTAAAGTCCAGGTCCTCATCCGTCCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp GCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAAAAGAGGCGGGAGGGACCTaGGCCGGGGAGACAAGAAGG +
Preference number: 4 (lower is better)
Translates to: AFSFLSRRSNRVPPEMRKEAGGT*AGETRR
Trigger: CCTTCTTGTCTCCCCGGCCCAGGTCCCTCCCGCCTC...TTTTCTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TTTCTACCCAAGGAGGAAATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGCGGGATGGATGGACCTaGAGGCGGGAGGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: FLPKEEISIFLLVQAKQQRDGWT*RREGPG
Trigger: CCCAGGTCCCTCCCGCCTCCAGGTCCATCCATCCCG...CTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGATTTCCTCCTTGGGTAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp GCCCAGCAGAACCCTGAATTGGCAAACAGCCTCAGGCGAAGTCCATTTCTCAATCTTTTCCGGACGGGATaGATGGACCTGGAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: AQQNPELANSLRRSPFLNLFRTG*MDLEAG
Trigger: TCCCGCCTCCAGGTCCATCCATCCCGTCCGGAAAAG...ATTGAGAAATGGACTTCGCCTGAGGCTGTTTGCCAATTCAGGGTTCTGCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp CAGGGTGGTGACTGGCATTATTCTGTGGTCGAGCCTCTAGGGATTGTTGTAAAGGGTCGGCGGGTCGGGTaGAGCGGGTTTATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: QGGDWHYSVVEPLGIVVKGRRVG*SGFILL
Trigger: CAGCAAGATAAACCCGCTCCACCCGACCCGCCGACC...CTTTACAACAATCCCTAGAGGCTCGACCACAGAATAATGCCAGTCACCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp AGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTCCCAGGATCCGGAGTGCATAGCTTCTTGGTaGGCTGAAGGGTACCACGAT +
Preference number: 4 (lower is better)
Translates to: RFPHQLHRWSGRVSQDPECIASW*AEGYHD
Trigger: ATCGTGGTACCCTTCAGCGCACCAAGAAGCTATGCA...CTCCGGATCCTGGGACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp CCAAGGAGGAAATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTACTCTCTGCTGCCACTaGTCGGCCCAGGCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: PRRKSAFSFLSRRSNRVPTLCCH*SAQARV
Trigger: AACCCTGGCCTGGGCCGAGCAGTGGCAGCAGAGAGT...AGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGATTTCCTCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp GTCAAGATTCTCATTTCACAAAGCATGGGGTTTTACAGCCACACACAACAGAACGGGGCTCCGAGGAGATaGAGGGCGTCCCGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VKILISQSMGFYSHTQQNGAPRR*RASRLH
Trigger: GTGGAGGCGGGACGCCCTCCATCTCCTCGGAGCCCC...GTTCTGTTGTGTGTGGCTGTAAAACCCCATGCTTTGTGAAATGAGAATCTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TCCCTCCAATGCCCCCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTTTATCTTGCTGCTTaGGCTGTCTCAGGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: SLQCPQIPTPATQMVRQSVYLAA*AVSGGS
Trigger: ACTGCCACCTGAGACAGCCCAAGCAGCAAGATAAAC...ACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGGGGGCATTGGAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp TTTCTACCCAAGGAGGAAATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGGCTGAGGCCGCAGAATaGGGACAGCGGACGGATGAG +
Preference number: 4 (lower is better)
Translates to: FLPKEEISIFLLVQAKQQAEAAE*GQRTDE
Trigger: CTCATCCGTCCGCTGTCCTCATTCTGCGGCCTCAGC...CTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGATTTCCTCCTTGGGTAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp CGGATGAGGACCTGGACTTTACCAGCGCACAGACAGAGCAAAAGGAGACAGGAGTTTTTCCCTTGCCATTaGAGCGCACTTCACCGCCTT +
Preference number: 4 (lower is better)
Translates to: RMRTWTLPAHRQSKRRQEFFPCH*SALHRL
Trigger: AAGGCGGTGAAGTGCGCTTCAATGGCAAGGGAAAAA...CTCCTGTCTCCTTTTGCTCTGTCTGTGCGCTGGTAAAGTCCAGGTCCTCATCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361725.5
CDS-3UTR GCA 90 bp CAGCGGACGGATGAGGACCTGGACTTTACCAGCGCACAGACAGAGCAAAAGGAGCACATAAGTTGGGGTTaGTGCATAGCTTCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: QRTDEDLDFTSAQTEQKEHISWG*CIASWC
Trigger: GCACCAAGAAGCTATGCAGCAACCCCAACTTATGTG...CTCCTTTTGCTCTGTCTGTGCGCTGGTAAAGTCCAGGTCCTCATCCGTCCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TCCCTCCAATGCCCCCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGCTGTTGAGACTTTCTaGCATGGTGGTCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: SLQCPQIPTPATQMVRQSAVETF*HGGHGH
Trigger: ATGACCATGACCACCATGCCAGAAAGTCTCAACAGC...ACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGGGGGCATTGGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TGTCAAGATTCTCATTTCACAAAGCATGGGGTTTTACAGCCACACACAACAGAAGGCTCTGGGCGAGGCTaGCGCTGCCCGGGTAGGACT +
Preference number: 4 (lower is better)
Translates to: CQDSHFTKHGVLQPHTTEGSGRG*RCPGRT
Trigger: AGTCCTACCCGGGCAGCGCCAGCCTCGCCCAGAGCC...TTCTGTTGTGTGTGGCTGTAAAACCCCATGCTTTGTGAAATGAGAATCTTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp CCAAGGAGGAAATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTTGTCTCAGGTGGCAGTaGCTTCCCTCCGAGGCCACT +
Preference number: 4 (lower is better)
Translates to: PRRKSAFSFLSRRSNRVPCLRWQ*LPSEAT
Trigger: AGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACA...AGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGATTTCCTCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp AGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAAAATCATGTTGGCTTCATTTACCCAGGATCCGGAGATaGTCAGCCCGGCAGGACCCG +
Preference number: 4 (lower is better)
Translates to: RRSNRVPPEMRKSCWLHLPRIRR*SARQDP
Trigger: CGGGTCCTGCCGGGCTGACCATCTCCGGATCCTGGG...TAAATGAAGCCAACATGATTTTCTCATTTCGGGAGGAACTCTGTTGCTTCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
3UTR CAA 72 bp GAACAGTGCGTTCCTTGCGCCCAGCAGAACCCTGAATaGGCAAACAGCCTCAGGCGAAGTCCATTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: EQCVPCAQQNPE*ANSLRRSPFLN
Trigger: ATTGAGAAATGGACTTCGCCTGAGGCTGTTTGCCAATTCAGGGTTCTGCTGGGCGCAAGGAACGCACTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp TGTCAAGATTCTCATTTCACAAAGCATGGGGTTTTACAGCCACACACAACAGAAGGAGAAGGACGAGGCTaGGCTGTAGGCGCCGTCGGG +
Preference number: 4 (lower is better)
Translates to: CQDSHFTKHGVLQPHTTEGEGRG*AVGAVG
Trigger: CCCGACGGCGCCTACAGCTCAGCCTCGTCCTTCTCC...TTCTGTTGTGTGTGGCTGTAAAACCCCATGCTTTGTGAAATGAGAATCTTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp ATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAGGACTGCACCGAACTaGTGTAGGGGCTGGATGCGT +
Preference number: 4 (lower is better)
Translates to: ISIFLLVQAKQQSSSRNERTAPN*CRGWMR
Trigger: ACGCATCCAGCCCCTACATCAGTTCGGTGCAGTCCT...CTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TATAAATTAAAAATCACCACGTCCTCCTTATTCGTTTCTCCCCGTGCGCTTAAAGGCTCTGGGCGAGGCTaGCGCTGCCCGGGTAGGACT +
Preference number: 4 (lower is better)
Translates to: YKLKITTSSLFVSPRALKGSGRG*RCPGRT
Trigger: AGTCCTACCCGGGCAGCGCCAGCCTCGCCCAGAGCC...TTTAAGCGCACGGGGAGAAACGAATAAGGAGGACGTGGTGATTTTTAATTTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp CAGGGTGGTGACTGGCATTATTCTGTGGTCGAGCCTCTAGGGATTGTTGTAAAGACCACGATGTGTAGCTaGGGATATAGGAGCCCGCGT +
Preference number: 4 (lower is better)
Translates to: QGGDWHYSVVEPLGIVVKTTMCS*GYRSPR
Trigger: ACGCGGGCTCCTATATCCCCAGCTACACATCGTGGT...CTTTACAACAATCCCTAGAGGCTCGACCACAGAATAATGCCAGTCACCACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp AGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTCCCAGGATCCGGAGGCTTCATCAGCTTCTTaGACTTGGATCGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: RFPHQLHRWSGRVSQDPEASSAS*TWIACF
Trigger: AAAACAAGCGATCCAAGTTCAAGAAGCTGATGAAGC...CTCCGGATCCTGGGACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp TCCAATGCCCCCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTCCGCTTCATCAGCTTCTTaGACTTGGATCGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SNAPRFPHQLHRWSGRVSASSAS*TWIACF
Trigger: AAAACAAGCGATCCAAGTTCAAGAAGCTGATGAAGC...GGACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGGGGGCATTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp CGGATGAGGACCTGGACTTTACCAGCGCACAGACAGAGCAAAAGGAGACAGGAGCCACTGGAATTAGAGTaGTTGTTCTCGCCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: RMRTWTLPAHRQSKRRQEPLELE*LFSPVF
Trigger: GAAAACAGGCGAGAACAAGCACTCTAATTCCAGTGG...CTCCTGTCTCCTTTTGCTCTGTCTGTGCGCTGGTAAAGTCCAGGTCCTCATCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp CCAAGGAGGAAATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTCACCAGCTACACAGATaGTCAGGCAGAGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PRRKSAFSFLSRRSNRVPHQLHR*SGRVSQ
Trigger: CTGGGACACTCTGCCTGACCATCTGTGTAGCTGGTG...AGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGATTTCCTCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp GCCCAGCAGAACCCTGAATTGGCAAACAGCCTCAGGCGAAGTCCATTTCTCAATGTTCAGGGTGGTGACTaGCATTATTCTGTGGTCGAG +
Preference number: 4 (lower is better)
Translates to: AQQNPELANSLRRSPFLNVQGGD*HYSVVE
Trigger: CTCGACCACAGAATAATGCCAGTCACCACCCTGAAC...ATTGAGAAATGGACTTCGCCTGAGGCTGTTTGCCAATTCAGGGTTCTGCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TCCAATGCCCCCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTCCTCATTTCACAAAGCATaGGGTTTTACAGCCACACAC +
Preference number: 4 (lower is better)
Translates to: SNAPRFPHQLHRWSGRVSSFHKA*GFTATH
Trigger: GTGTGTGGCTGTAAAACCCCATGCTTTGTGAAATGA...GGACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGGGGGCATTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp ATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAGCTTCTTGGTGCGCTaGAGGGTACCACGATGTGTA +
Preference number: 4 (lower is better)
Translates to: ISIFLLVQAKQQSSSRNESFLVR*RVPRCV
Trigger: TACACATCGTGGTACCCTTCAGCGCACCAAGAAGCT...CTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp CAGGGTGGTGACTGGCATTATTCTGTGGTCGAGCCTCTAGGGATTGTTGTAAAGAGTAAACAGTGCGTTTaGACAGTGCGTTCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: QGGDWHYSVVEPLGIVVKSKQCV*TVRSLR
Trigger: GCGCAAGGAACGCACTGTTCAAACGCACTGTTTACT...CTTTACAACAATCCCTAGAGGCTCGACCACAGAATAATGCCAGTCACCACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp TATAAATTAAAAATCACCACGTCCTCCTTATTCGTTTCTCCCCGTGCGCTTAAACGCCTTCCACCACCGTaGTCTTCTCCGAGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: YKLKITTSSLFVSPRALKRLPPP*SSPSPP
Trigger: GGGCGGACTCGGAGAAGAGCACGGTGGTGGAAGGCG...TTTAAGCGCACGGGGAGAAACGAATAAGGAGGACGTGGTGATTTTTAATTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361725.5
CDS-3UTR CCA 90 bp AAAGTAAACAGTGCGTTTGAACAGTGCGTTCCTTGCGCCCAGCAGAACCCTGAAGTTTATCTTGCTGCTTaGGCTGTCTCAGGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: KVNSAFEQCVPCAQQNPEVYLAA*AVSGGS
Trigger: ACTGCCACCTGAGACAGCCCAAGCAGCAAGATAAAC...TTCAGGGTTCTGCTGGGCGCAAGGAACGCACTGTTCAAACGCACTGTTTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp GAGGAAATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAGTTCAGGGTGGTGACTaGCATTATTCTGTGGTCGAG +
Preference number: 4 (lower is better)
Translates to: EEISIFLLVQAKQQSSSRVQGGD*HYSVVE
Trigger: CTCGACCACAGAATAATGCCAGTCACCACCCTGAAC...TCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGATTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp TGTCAAGATTCTCATTTCACAAAGCATGGGGTTTTACAGCCACACACAACAGAACCGACACGGGGCTGTTaGGACTTTCTGGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: CQDSHFTKHGVLQPHTTEPTRGC*DFLAWW
Trigger: CCACCATGCCAGAAAGTCTCAACAGCCCCGTGTCGG...TTCTGTTGTGTGTGGCTGTAAAACCCCATGCTTTGTGAAATGAGAATCTTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp TTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAAAATCATGTTGGCTTGTGGCTTTTTGCTaGGGCCGCAGAATGAGGACA +
Preference number: 4 (lower is better)
Translates to: FLSRRSNRVPPEMRKSCWLVAFC*GRRMRT
Trigger: TGTCCTCATTCTGCGGCCTCAGCAAAAAGCCACAAG...CCAACATGATTTTCTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp GCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAAAAGTGCGTTCAGGGTGGTaGCTGGCATTATTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: AFSFLSRRSNRVPPEMRKVRSGW*LALFCG
Trigger: ACCACAGAATAATGCCAGTCACCACCCTGAACGCAC...TTTTCTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp GAGGAAATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAATAAGTTGGGGTTGCTaGATAGCTTCTTGGTGCGCT +
Preference number: 4 (lower is better)
Translates to: EEISIFLLVQAKQQSSSRISWGC*IASWCA
Trigger: AGCGCACCAAGAAGCTATGCAGCAACCCCAACTTAT...TCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGATTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp GTCAAGATTCTCATTTCACAAAGCATGGGGTTTTACAGCCACACACAACAGAACGGAGAAGGAGACATTTaGTGGTTGGGCGGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: VKILISQSMGFYSHTQQNGEGDI*WLGGPN
Trigger: GTTTGGGCCGCCCAACCAGCAAATGTCTCCTTCTCC...GTTCTGTTGTGTGTGGCTGTAAAACCCCATGCTTTGTGAAATGAGAATCTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp AGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAAAATCATGTTGGCTTCATTTAGGAGAAGGAGACATTTaGTGGTTGGGCGGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: RRSNRVPPEMRKSCWLHLGEGDI*WLGGPN
Trigger: GTTTGGGCCGCCCAACCAGCAAATGTCTCCTTCTCC...TAAATGAAGCCAACATGATTTTCTCATTTCGGGAGGAACTCTGTTGCTTCGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp GTCAAGATTCTCATTTCACAAAGCATGGGGTTTTACAGCCACACACAACAGAACAGTGCGTTTGAACAGTaGGTTCCTTGCGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VKILISQSMGFYSHTQQNSAFEQ*VPCAQQ
Trigger: CTGCTGGGCGCAAGGAACGCACTGTTCAAACGCACT...GTTCTGTTGTGTGTGGCTGTAAAACCCCATGCTTTGTGAAATGAGAATCTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp GCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAAAAAGCAGAACCCTGAATTaGCAAACAGCCTCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: AFSFLSRRSNRVPPEMRKSRTLN*QTASGE
Trigger: TTCGCCTGAGGCTGTTTGCCAATTCAGGGTTCTGCT...TTTTCTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp GTCAAGATTCTCATTTCACAAAGCATGGGGTTTTACAGCCACACACAACAGAACTGCATAGCTTCTTGGTaGGCTGAAGGGTACCACGAT +
Preference number: 4 (lower is better)
Translates to: VKILISQSMGFYSHTQQNCIASW*AEGYHD
Trigger: ATCGTGGTACCCTTCAGCGCACCAAGAAGCTATGCA...GTTCTGTTGTGTGTGGCTGTAAAACCCCATGCTTTGTGAAATGAGAATCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp GCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAAAACCACTGGAATTAGAGTaGTTGTTCTCGCCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: AFSFLSRRSNRVPPEMRKPLELE*LFSPVF
Trigger: GAAAACAGGCGAGAACAAGCACTCTAATTCCAGTGG...TTTTCTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp TATAAATTAAAAATCACCACGTCCTCCTTATTCGTTTCTCCCCGTGCGCTTAAAGAAGGAGACATTTGCTaGTTGGGCGGCCCAAACTCC +
Preference number: 4 (lower is better)
Translates to: YKLKITTSSLFVSPRALKEGDIC*LGGPNS
Trigger: GGAGTTTGGGCCGCCCAACCAGCAAATGTCTCCTTC...TTTAAGCGCACGGGGAGAAACGAATAAGGAGGACGTGGTGATTTTTAATTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp CATTATTCTGTGGTCGAGCCTCTAGGGATTGTTGTAAAGCTGATTTTGTCTTATGGACTTTCTCTCCTCTaGTTCCCTTTTGGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: HYSVVEPLGIVVKLILSYGLSLL*FPFGGL
Trigger: GAGACCCCCAAAAGGGAAGCAGAGGAGAGAAAGTCC...ATAAGACAAAATCAGCTTTACAACAATCCCTAGAGGCTCGACCACAGAATAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CCA 90 bp AGATTCTCATTTCACAAAGCATGGGGTTTTACAGCCACACACAACAGAACGCAAGACTTTCTGGCATGGTaGTCATGGTCATCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: RFSFHKAWGFTATHNRTQDFLAW*SWSSLL
Trigger: GAGAAGAGATGACCATGACCACCATGCCAGAAAGTC...TTGCGTTCTGTTGTGTGTGGCTGTAAAACCCCATGCTTTGTGAAATGAGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR TCA 90 bp AGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAAAATCATGTTGGCTTCATTTAGAGTTCCTCCCGAAATaGGAAAATCATGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RRSNRVPPEMRKSCWLHLEFLPK*ENHVGF
Trigger: GAAGCCAACATGATTTTCTCATTTCGGGAGGAACTC...TAAATGAAGCCAACATGATTTTCTCATTTCGGGAGGAACTCTGTTGCTTCGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp AGATTCTCATTTCACAAAGCATGGGGTTTTACAGCCACACACAACAGAACGCAAACAGTCATTAGATCCTaGACTGGAGATTGTGCGTTC +
Preference number: 4 (lower is better)
Translates to: RFSFHKAWGFTATHNRTQTVIRS*TGDCAF
Trigger: GAACGCACAATCTCCAGTGCAGGATCTAATGACTGT...TTGCGTTCTGTTGTGTGTGGCTGTAAAACCCCATGCTTTGTGAAATGAGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp TTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAAAATCATGTTGGAAAAGGCTAAGCTTGTaGAACATGTTTACAGAACAA +
Preference number: 4 (lower is better)
Translates to: FLSRRSNRVPPEMRKSCWKRLSL*NMFTEQ
Trigger: TTGTTCTGTAAACATGTTGCACAAGCTTAGCCTTTT...CCAACATGATTTTCTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR GCA 90 bp AGATTCTCATTTCACAAAGCATGGGGTTTTACAGCCACACACAACAGAACGCAAAAAAGGCTAAGCTTGTaGAACATGTTTACAGAACAA +
Preference number: 4 (lower is better)
Translates to: RFSFHKAWGFTATHNRTQKRLSL*NMFTEQ
Trigger: TTGTTCTGTAAACATGTTGCACAAGCTTAGCCTTTT...TTGCGTTCTGTTGTGTGTGGCTGTAAAACCCCATGCTTTGTGAAATGAGAATCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS GCA 90 bp GCCGCTGCGCCAACGCCGCTGTCGCTCCCTGGGGCCCGCTCGCATTaGTCCAGGCCCAGCTGGCCACTCCAGCTCGAGGCTGCACGGGTC +
Preference number: 5 (lower is better)
Translates to: AAAPTPLSLPGARSH*SRPSWPLQLEAARV
Trigger: GACCCGTGCAGCCTCGAGCTGGAGTGGCCAGCTGGGCCTGGAGCAATGCGAGCGGGCCCCAGGGAGCGACAGCGGCGTTGGCGCAGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361609.4
ENST00000469444.6
CDS-3UTR CAA 90 bp CGCGGATGCCGGGAAGTTGCTGGGCCGGACCTCGCGGGGCTCCGAGGAGATGGAGCGGATGCCGGGAAGTaGCTGGGCCGGACCTCGCGG +
Preference number: 5 (lower is better)
Translates to: RGCREVAGPDLAGLRGDGADAGK*LGRTSR
Trigger: CCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCGC...TCCATCTCCTCGGAGCCCCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp AGGGTTCAGGCTAGAGCGCGGATGCCGGGAAGTTGCTGGGCCGGACCTCGCGGGGCGGATGCCGGGAAGTaGCTGGGCCGGACCTCGCGG +
Preference number: 5 (lower is better)
Translates to: RVQARARMPGSCWAGPRGADAGK*LGRTSR
Trigger: CCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCGC...CCCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCGCGCTCTAGCCTGAACCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS CCA 90 bp AGCCGGGCGGCACGGGTGGGGAGCCAGCAGACAGGGCCCGACCGTTaGCCAACGCACTACCCTCCAGAGCCGCCCCACCCTGCTTCATCA +
Preference number: 5 (lower is better)
Translates to: SRAARVGSQQTGPDR*PTHYPPEPPHPASS
Trigger: TGATGAAGCAGGGTGGGGCGGCTCTGGAGGGTAGTGCGTTGGCCAACGGTCGGGCCCTGTCTGCTGGCTCCCCACCCGTGCCGCCCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341900.6
ENST00000361725.5
ENST00000475989.2
ENST00000550686.1
CDS GCA 90 bp CGAGCAACAAATGAAGACCCGGGCGCAGGCCGGCCGCGGAAAGCCTaGGTGGCAGAACGGAGCGGCAGCGGCGAGGTACCTGAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: RATNEDPGAGRPRKA*VAERSGSGEVPESV
Trigger: CACAGACTCAGGTACCTCGCCGCTGCCGCTCCGTTCTGCCACGCAGGCTTTCCGCGGCCGGCCTGCGCCCGGGTCTTCATTTGTTGCTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409492.1
CDS GCA 90 bp GGCGCTGCCCGGGTAGGACTGCACCGAACTGATGTAGGGGCTGGATaGGTGGCTGCTGACCGAGTTGACGTAGGGGTAGCCCAGCGGTCG +
Preference number: 5 (lower is better)
Translates to: GAARVGLHRTDVGAG*VAADRVDVGVAQRS
Trigger: CGACCGCTGGGCTACCCCTACGTCAACTCGGTCAGCAGCCACGCATCCAGCCCCTACATCAGTTCGGTGCAGTCCTACCCGGGCAGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341900.6
ENST00000361609.4
ENST00000361725.5
ENST00000409492.1
ENST00000469444.6
CDS CCA 90 bp TCTTGCATAATCACTGGGGATTGGTCCGAGGCGCTCGGGCTCCGCTaGACTAGAGCGGGCGAGGCGGCCCGGCCTCGGGTAAGACGCATC +
Preference number: 5 (lower is better)
Translates to: SCIITGDWSEALGLR*TRAGEAARPRVRRI
Trigger: GATGCGTCTTACCCGAGGCCGGGCCGCCTCGCCCGCTCTAGTCCAGCGGAGCCCGAGCGCCTCGGACCAATCCCCAGTGATTATGCAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361609.4
CDS CCA 90 bp CAACAAATGAAGACCCGGGCGCAGGCCGGCCGCGGAAAGCCTGCGTaGCAGAACGGAGCGGCAGCGGCGAGGTACCTGAGTCTGTGTGAG +
Preference number: 5 (lower is better)
Translates to: QQMKTRAQAGRGKPA*QNGAAAARYLSLCE
Trigger: CTCACACAGACTCAGGTACCTCGCCGCTGCCGCTCCGTTCTGCCACGCAGGCTTTCCGCGGCCGGCCTGCGCCCGGGTCTTCATTTGTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409492.1
CDS GCA 90 bp CCGCTCGCATTGCTCCAGGCCCAGCTGGCCACTCCAGCTCGAGGCTaGACGGGTCTGATTAAAGCAGTGCGCGTGGAGAGCCAGGAACCC +
Preference number: 5 (lower is better)
Translates to: PLALLQAQLATPARG*TGLIKAVRVESQEP
Trigger: GGGTTCCTGGCTCTCCACGCGCACTGCTTTAATCAGACCCGTGCAGCCTCGAGCTGGAGTGGCCAGCTGGGCCTGGAGCAATGCGAGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361609.4
ENST00000469444.6
CDS GCA 90 bp GCCAGGGAAGGGTCCCCCAAAATCCGAGGGCCTGTCCCGGGACGCTaGAGGAGGGATAGAGCCGTTCCCAGGAGCTCAGCTCCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: AREGSPKIRGPVPGR*RRDRAVPRSSAPAF
Trigger: AAAGGCAGGAGCTGAGCTCCTGGGAACGGCTCTATCCCTCCTGCAGCGTCCCGGGACAGGCCCTCGGATTTTGGGGGACCCTTCCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475989.2
CDS CCA 90 bp CTGGCGGAGCTGATTGGTCCGCTGTCTTGCATAATCACTGGGGATTaGTCCGAGGCGCTCGGGCTCCGCTGGACTAGAGCGGGCGAGGCG +
Preference number: 5 (lower is better)
Translates to: LAELIGPLSCIITGD*SEALGLRWTRAGEA
Trigger: CGCCTCGCCCGCTCTAGTCCAGCGGAGCCCGAGCGCCTCGGACCAATCCCCAGTGATTATGCAAGACAGCGGACCAATCAGCTCCGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361609.4
CDS-3UTR CAA 90 bp AGGCTAGAGCGCGGATGCCGGGAAGTTGCTGGGCCGGACCTCGCGGGGCTCCGACAGCAGAACCCTGAATaGGCAAACAGCCTCAGGCGA +
Preference number: 5 (lower is better)
Translates to: RLERGCREVAGPDLAGLRQQNPE*ANSLRR
Trigger: TCGCCTGAGGCTGTTTGCCAATTCAGGGTTCTGCTG...TCGGAGCCCCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCGCGCTCTAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp CGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCTTTTTGCTCCATAAACACCGCCTaGCCCGACACGGGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: RRWSARQDPGRSDLVAFCSINTA*PDTGLL
Trigger: CAACAGCCCCGTGTCGGGCAAGGCGGTGTTTATGGA...GCAAAAAGCCACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp CGGGTTTATCTTGCTGCTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGGACAGGGCCCGACCGTaGGCCAACGCACTACCCTCC +
Preference number: 5 (lower is better)
Translates to: RVYLAAWAVSGGSGFPPRDRARP*ANALPS
Trigger: GGAGGGTAGTGCGTTGGCCAACGGTCGGGCCCTGTC...CCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCAGCAAGATAAACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp GATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCTTTTTGCTGAGCCCGACACGGGGCTGTaGAGACTTTCTGGCATGGTG +
Preference number: 5 (lower is better)
Translates to: DGQPGRTRAAQTLWLFAEPDTGL*RLSGMV
Trigger: CACCATGCCAGAAAGTCTCAACAGCCCCGTGTCGGG...CTCAGCAAAAAGCCACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp TGCTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCTCCATAAACACCGCCTaGCCCGACACGGGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: CLGCLRWQWLPSEATLCCSINTA*PDTGLL
Trigger: CAACAGCCCCGTGTCGGGCAAGGCGGTGTTTATGGA...GCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp GGACCTGGGCCGGGGAGACAAGAAGGAGACGGGCGGGCAACCTCACATAAGTTGCGGGCCGCTCAGACCTaGTGGCTTTTTGCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: GPGPGRQEGDGRATSHKLRAAQT*WLFAEA
Trigger: GGCCTCAGCAAAAAGCCACAAGGTCTGAGCGGCCCG...CAACTTATGTGAGGTTGCCCGCCCGTCTCCTTCTTGTCTCCCCGGCCCAGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341900.6
CDS-3UTR CAA 90 bp CGCGGATGCCGGGAAGTTGCTGGGCCGGACCTCGCGGGGCTCCGAGGAGATGGATCACATAAGTTGGGGTaGCTGCATAGCTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: RGCREVAGPDLAGLRGDGSHKLG*LHSFLV
Trigger: CACCAAGAAGCTATGCAGCAACCCCAACTTATGTGA...TCCATCTCCTCGGAGCCCCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp CTCGCGGGGCTCCGAGGAGATGGAGGGCGTCCCGCCTCCACTGTTCCTTCTTCCAGACCTTGTGGCTTTTaGCTGAGGCCGCAGAATGAG +
Preference number: 5 (lower is better)
Translates to: LAGLRGDGGRPASTVPSSRPCGF*LRPQNE
Trigger: CTCATTCTGCGGCCTCAGCAAAAAGCCACAAGGTCT...GGAAGAAGGAACAGTGGAGGCGGGACGCCCTCCATCTCCTCGGAGCCCCGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp CGGGGCTCCGAGGAGATGGAGGGCGTCCCGCCTCCACTGTTCCTTCTTCCCTCTCTCTCTACTCCCCATTaGCCCTCGCTCCCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: RGSEEMEGVPPPLFLLPSLSTPH*PSLPLS
Trigger: AGAAAGAGGGAGCGAGGGCAAATGGGGAGTAGAGAG...AGAGGGAAGAAGGAACAGTGGAGGCGGGACGCCCTCCATCTCCTCGGAGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS CCA 90 bp AGGCGCCGTCGGGCTGCGAATGGCCCGCCGAGTGTAAACAGTGCATaGAGTAGTGCCCGTGGGACATGGGAGAAGGAGACATTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: RRRRAANGPPSVNSA*SSARGTWEKETFAG
Trigger: ACCAGCAAATGTCTCCTTCTCCCATGTCCCACGGGCACTACTCCATGCACTGTTTACACTCGGCGGGCCATTCGCAGCCCGACGGCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341900.6
ENST00000361609.4
ENST00000361725.5
ENST00000409492.1
ENST00000469444.6
CDS-3UTR CAA 90 bp TCGGCGGGTCGGGTGGAGCGGGTTTATCTTGCTGCTTGGGCTGTCTCAGGTGGCGGTTTATCTTGCTGCTaGGGCTGTCTCAGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: SAGRVERVYLAAWAVSGGGLSCC*GCLRWQ
Trigger: CTGCCACCTGAGACAGCCCAAGCAGCAAGATAAACC...GCCACCTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCCACCCGACCCGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp TGGGTCCTTCTTTTCCGGACGGGATGGATGGACCTGGAGGCGGGAGGGACCTGGTGGAGCGGGTTTATCTaGCTGCTTGGGCTGTCTCAG +
Preference number: 5 (lower is better)
Translates to: WVLLFRTGWMDLEAGGTWWSGFI*LLGLSQ
Trigger: CTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCCA...CCAGGTCCCTCCCGCCTCCAGGTCCATCCATCCCGTCCGGAAAAGAAGGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp TGCTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCATCCTGCACTGGAGATaGTGCGTTCAGGGTGGTGAC +
Preference number: 5 (lower is better)
Translates to: CLGCLRWQWLPSEATLCCILHWR*CVQGGD
Trigger: GTCACCACCCTGAACGCACAATCTCCAGTGCAGGAT...GCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS TCA 90 bp CCCAAAGAGGCCGCGAGCTCCGCCCTCTCCGGCAGAGCTAGGTACTaGGTTTGCTGGAACCTCCGGTTCAAAGCCTGCAACTGCAAACTG +
Preference number: 5 (lower is better)
Translates to: PKEAASSALSGRARY*VCWNLRFKACNCKL
Trigger: CAGTTTGCAGTTGCAGGCTTTGAACCGGAGGTTCCAGCAAACTCAGTACCTAGCTCTGCCGGAGAGGGCGGAGCTCGCGGCCTCTTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361609.4
ENST00000361725.5
ENST00000409492.1
ENST00000469444.6
ENST00000475989.2
CDS-3UTR CAA 90 bp GGACCTGGGCCGGGGAGACAAGAAGGAGACGGGCGGGCAACCTCACATAAGTTGTGGAGCGGGTTTATCTaGCTGCTTGGGCTGTCTCAG +
Preference number: 5 (lower is better)
Translates to: GPGPGRQEGDGRATSHKLWSGFI*LLGLSQ
Trigger: CTGAGACAGCCCAAGCAGCAAGATAAACCCGCTCCA...CAACTTATGTGAGGTTGCCCGCCCGTCTCCTTCTTGTCTCCCCGGCCCAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341900.6
CDS-3UTR CAA 90 bp CAGGATCCGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCCTGGAATTAGAGTGCTaGTTCTCGCCTGTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: QDPEMVSPAGPGPLRPCGLELEC*FSPVFS
Trigger: AGAGAAAACAGGCGAGAACAAGCACTCTAATTCCAG...GCCACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCGGATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS CCA 90 bp CTCCATAAACACCGCCTTGCCCGACACGGGGCTGTTGAGACTTTCTaGCATGGTGGTCATGGTCATCTCTTCTCGCGGGGTCTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: LHKHRLARHGAVETF*HGGHGHLFSRGLGV
Trigger: CACACCCAGACCCCGCGAGAAGAGATGACCATGACCACCATGCCAGAAAGTCTCAACAGCCCCGTGTCGGGCAAGGCGGTGTTTATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341900.6
ENST00000361609.4
ENST00000361725.5
ENST00000409492.1
ENST00000469444.6
CDS-3UTR CAA 90 bp CTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCCAGCAACCTCACATAAGTaGGGGTTGCTGCATAGCTTC +
Preference number: 5 (lower is better)
Translates to: LGLSQVAVASLRGHSLLPATSHK*GLLHSF
Trigger: GAAGCTATGCAGCAACCCCAACTTATGTGAGGTTGC...TGGCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS GCA 90 bp TTCAAAACCATTCTTGCACTAGTGTCTGTTTGCTTTCTCCAGCTCTaGTCCAAATCCCGGACCGGACGTCGGAAACCCGCGCCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: FKTILALVSVCFLQL*SKSRTGRRKPAPAA
Trigger: GGCGGCGGGCGCGGGTTTCCGACGTCCGGTCCGGGATTTGGAGCAGAGCTGGAGAAAGCAAACAGACACTAGTGCAAGAATGGTTTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550686.1
CDS-3UTR CAA 90 bp CCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTCCCAGGATCCGGGGAGACATTTGCTGGTaGGGCGGCCCAAACTCCATA +
Preference number: 5 (lower is better)
Translates to: PDSHTSYTDGQAECPRIRGDICW*GGPNSI
Trigger: TATGGAGTTTGGGCCGCCCAACCAGCAAATGTCTCC...CCGGATCCTGGGACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp CGGGTTTATCTTGCTGCTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGAGACCTTGTGGCTTTTaGCTGAGGCCGCAGAATGAG +
Preference number: 5 (lower is better)
Translates to: RVYLAAWAVSGGSGFPPRRPCGF*LRPQNE
Trigger: CTCATTCTGCGGCCTCAGCAAAAAGCCACAAGGTCT...CCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCAGCAAGATAAACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp CAGGATCCGGAGATGGTCAGCCCGGCAGGACCCGGGCCGCTCAGACCTTGTGGCGCAAAAAGGCTAAGCTaGTGCAACATGTTTACAGAA +
Preference number: 5 (lower is better)
Translates to: QDPEMVSPAGPGPLRPCGAKRLS*CNMFTE
Trigger: TTCTGTAAACATGTTGCACAAGCTTAGCCTTTTTGC...GCCACAAGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCGGATCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp CGCGGATGCCGGGAAGTTGCTGGGCCGGACCTCGCGGGGCTCCGAGGAGATGGAATGGAGTTTGTCTCTTaGAAAAGTCTAAGCATGATG +
Preference number: 5 (lower is better)
Translates to: RGCREVAGPDLAGLRGDGMEFVS*KSLSMM
Trigger: CATCATGCTTAGACTTTTCAAAGAGACAAACTCCAT...TCCATCTCCTCGGAGCCCCGCGAGGTCCGGCCCAGCAACTTCCCGGCATCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361725.5
CDS GCA 90 bp GTCATAAATATTCATGAGCTGGCGGAGCTGATTGGTCCGCTGTCTTaGATAATCACTGGGGATTGGTCCGAGGCGCTCGGGCTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: VINIHELAELIGPLS*IITGDWSEALGLRW
Trigger: CCAGCGGAGCCCGAGCGCCTCGGACCAATCCCCAGTGATTATGCAAGACAGCGGACCAATCAGCTCCGCCAGCTCATGAATATTTATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361609.4
CDS-3UTR CAA 90 bp ATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGGACAGGGCCCGACCGTaGGCCAACGCACTACCCTCC +
Preference number: 5 (lower is better)
Translates to: ISIFLLVQAKQQSSSRNEDRARP*ANALPS
Trigger: GGAGGGTAGTGCGTTGGCCAACGGTCGGGCCCTGTC...CTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp TCCCTCCAATGCCCCCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTCAGCAGAACCCTGAATaGGCAAACAGCCTCAGGCGA +
Preference number: 5 (lower is better)
Translates to: SLQCPQIPTPATQMVRQSQQNPE*ANSLRR
Trigger: TCGCCTGAGGCTGTTTGCCAATTCAGGGTTCTGCTG...ACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGGGGGCATTGGAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp GTTCCTTGCGCCCAGCAGAACCCTGAATTGGCAAACAGCCTCAGGCGAAGTCCACTCTCTACTCCCCATTaGCCCTCGCTCCCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: VPCAQQNPELANSLRRSPLSTPH*PSLPLS
Trigger: AGAAAGAGGGAGCGAGGGCAAATGGGGAGTAGAGAG...TGGACTTCGCCTGAGGCTGTTTGCCAATTCAGGGTTCTGCTGGGCGCAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp TCCCTCCAATGCCCCCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTATCCTGCACTGGAGATaGTGCGTTCAGGGTGGTGAC +
Preference number: 5 (lower is better)
Translates to: SLQCPQIPTPATQMVRQSILHWR*CVQGGD
Trigger: GTCACCACCCTGAACGCACAATCTCCAGTGCAGGAT...ACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGGGGGCATTGGAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp TGCTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCTGCTTCATCAGCTTCTaGAACTTGGATCGCTTGTTT +
Preference number: 5 (lower is better)
Translates to: CLGCLRWQWLPSEATLCCCFISF*NLDRLF
Trigger: AAACAAGCGATCCAAGTTCAAGAAGCTGATGAAGCA...GCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp TGCTTGGGCTGTCTCAGGTGGCAGTGGCTTCCCTCCGAGGCCACTCTCTGCTGCGCAAAAAGGCTAAGCTaGTGCAACATGTTTACAGAA +
Preference number: 5 (lower is better)
Translates to: CLGCLRWQWLPSEATLCCAKRLS*CNMFTE
Trigger: TTCTGTAAACATGTTGCACAAGCTTAGCCTTTTTGC...GCAGCAGAGAGTGGCCTCGGAGGGAAGCCACTGCCACCTGAGACAGCCCAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp TTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAAAATCATGTTGGCCCGACACGGGGCTGTaGAGACTTTCTGGCATGGTG +
Preference number: 5 (lower is better)
Translates to: FLSRRSNRVPPEMRKSCWPDTGL*RLSGMV
Trigger: CACCATGCCAGAAAGTCTCAACAGCCCCGTGTCGGG...CCAACATGATTTTCTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp CCAAGGAGGAAATCAGCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTGGGAGAAGGAGACATTaGCTGGTTGGGCGGCCCAAA +
Preference number: 5 (lower is better)
Translates to: PRRKSAFSFLSRRSNRVPGRRRH*LVGRPK
Trigger: TTTGGGCCGCCCAACCAGCAAATGTCTCCTTCTCCC...AGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGATTTCCTCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp CCCACTGGAATTAGAGTGCTTGTTCTCGCCTGTTTTCTCTCTACTCCCCATTTGGGGAGAAGGAGACATTaGCTGGTTGGGCGGCCCAAA +
Preference number: 5 (lower is better)
Translates to: PTGIRVLVLACFLSTPHLGRRRH*LVGRPK
Trigger: TTTGGGCCGCCCAACCAGCAAATGTCTCCTTCTCCC...CAAATGGGGAGTAGAGAGAAAACAGGCGAGAACAAGCACTCTAATTCCAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp GTTCCTTGCGCCCAGCAGAACCCTGAATTGGCAAACAGCCTCAGGCGAAGTCCAATCAGCTTCTTGAACTaGGATCGCTTGTTTTGGAAC +
Preference number: 5 (lower is better)
Translates to: VPCAQQNPELANSLRRSPISFLN*DRLFWN
Trigger: GTTCCAAAACAAGCGATCCAAGTTCAAGAAGCTGAT...TGGACTTCGCCTGAGGCTGTTTGCCAATTCAGGGTTCTGCTGGGCGCAAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp TCCAATGCCCCCAGATTCCCACACCAGCTACACAGATGGTCAGGCAGAGTGTCCTGCTTCATCAGCTTCTaGAACTTGGATCGCTTGTTT +
Preference number: 5 (lower is better)
Translates to: SNAPRFPHQLHRWSGRVSCFISF*NLDRLF
Trigger: AAACAAGCGATCCAAGTTCAAGAAGCTGATGAAGCA...GGACACTCTGCCTGACCATCTGTGTAGCTGGTGTGGGAATCTGGGGGCATTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp GCATTTTCCTTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAAAATTTTGGAACCAGATCTaGACCTGGGTCCTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: AFSFLSRRSNRVPPEMRKFWNQI*TWVLQA
Trigger: CGCCTGGAGGACCCAGGTCAAGATCTGGTTCCAAAA...TTTTCTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAAGGAAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341900.6
CDS GCA 90 bp GAACTTCTCTTTGGATTCAAAACCATTCTTGCACTAGTGTCTGTTTaGTTTCTCCAGCTCTGCTCCAAATCCCGGACCGGACGTCGGAAA +
Preference number: 5 (lower is better)
Translates to: ELLFGFKTILALVSV*FLQLCSKSRTGRRK
Trigger: TTTCCGACGTCCGGTCCGGGATTTGGAGCAGAGCTGGAGAAAGCAAACAGACACTAGTGCAAGAATGGTTTTGAATCCAAAGAGAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550686.1
CDS-3UTR CAA 90 bp AGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAAAATCATGTTGGCTTCATTTAGGTTTATCTTGCTGCTaGGGCTGTCTCAGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: RRSNRVPPEMRKSCWLHLGLSCC*GCLRWQ
Trigger: CTGCCACCTGAGACAGCCCAAGCAGCAAGATAAACC...TAAATGAAGCCAACATGATTTTCTCATTTCGGGAGGAACTCTGTTGCTTCGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp AAAGTAAACAGTGCGTTTGAACAGTGCGTTCCTTGCGCCCAGCAGAACCCTGAAATCAGCTTCTTGAACTaGGATCGCTTGTTTTGGAAC +
Preference number: 5 (lower is better)
Translates to: KVNSAFEQCVPCAQQNPEISFLN*DRLFWN
Trigger: GTTCCAAAACAAGCGATCCAAGTTCAAGAAGCTGAT...TTCAGGGTTCTGCTGGGCGCAAGGAACGCACTGTTCAAACGCACTGTTTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp TTCTTGTCCAGGCGAAGCAACAGAGTTCCTCCCGAAATGAGAAAATCATGTTGGTCAGCATTTTCCTTCTaGTCCAGGCGAAGCAACAGA +
Preference number: 5 (lower is better)
Translates to: FLSRRSNRVPPEMRKSCWSAFSF*SRRSNR
Trigger: TCTGTTGCTTCGCCTGGACAAGAAGGAAAATGCTGA...CCAACATGATTTTCTCATTTCGGGAGGAACTCTGTTGCTTCGCCTGGACAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp TGTCAAGATTCTCATTTCACAAAGCATGGGGTTTTACAGCCACACACAACAGAAGCAACCTCACATAAGTaGGGGTTGCTGCATAGCTTC +
Preference number: 5 (lower is better)
Translates to: CQDSHFTKHGVLQPHTTEATSHK*GLLHSF
Trigger: GAAGCTATGCAGCAACCCCAACTTATGTGAGGTTGC...TTCTGTTGTGTGTGGCTGTAAAACCCCATGCTTTGTGAAATGAGAATCTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp TATAAATTAAAAATCACCACGTCCTCCTTATTCGTTTCTCCCCGTGCGCTTAAATCACATAAGTTGGGGTaGCTGCATAGCTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: YKLKITTSSLFVSPRALKSHKLG*LHSFLV
Trigger: CACCAAGAAGCTATGCAGCAACCCCAACTTATGTGA...TTTAAGCGCACGGGGAGAAACGAATAAGGAGGACGTGGTGATTTTTAATTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS-3UTR CAA 90 bp TATAAATTAAAAATCACCACGTCCTCCTTATTCGTTTCTCCCCGTGCGCTTAAACTGGAATTAGAGTGCTaGTTCTCGCCTGTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: YKLKITTSSLFVSPRALKLELEC*FSPVFS
Trigger: AGAGAAAACAGGCGAGAACAAGCACTCTAATTCCAG...TTTAAGCGCACGGGGAGAAACGAATAAGGAGGACGTGGTGATTTTTAATTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341900.6
ENST00000361725.5
CDS CCA 72 bp TCCTTCGGCCGCTGCGCCAACGCCGCTGTCGCTCCCTaGGGCCCGCTCGCATTGCTCCAGGCCCAGCTGGCC +
Preference number: 6 (lower is better)
Translates to: SFGRCANAAVAP*GPLALLQAQLA
Trigger: GGCCAGCTGGGCCTGGAGCAATGCGAGCGGGCCCCAGGGAGCGACAGCGGCGTTGGCGCAGCGGCCGAAGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361609.4
CDS CCA 72 bp GTTTTCGGCCGCTGCGCCAACGCCGCTGTCGCTCCCTaGGGCCCGCTCGCATTGCTCCAGGCCCAGCTGGCC +
Preference number: 6 (lower is better)
Translates to: VFGRCANAAVAP*GPLALLQAQLA
Trigger: GGCCAGCTGGGCCTGGAGCAATGCGAGCGGGCCCCAGGGAGCGACAGCGGCGTTGGCGCAGCGGCCGAAAAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469444.6
CDS CAA 90 bp CAGCCGGGCGGCACGGGTGGGGAGCCAGCAGACAGGGCCCGACCGTaGGCCAACGCACTACCCTCCAGAGCCGCCCCACCCTGCTTCATC +
Preference number: 6 (lower is better)
Translates to: QPGGTGGEPADRARP*ANALPSRAAPPCFI
Trigger: GATGAAGCAGGGTGGGGCGGCTCTGGAGGGTAGTGCGTTGGCCAACGGTCGGGCCCTGTCTGCTGGCTCCCCACCCGTGCCGCCCGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341900.6
ENST00000361725.5
ENST00000475989.2
ENST00000550686.1
CDS CCA 72 bp GCACGGGTGGGGAGCCAGCAGACAGGGCCCGACCGTTaGCCAACGCACTACCCTCCAGAGCCGCCCCACCCT +
Preference number: 6 (lower is better)
Translates to: ARVGSQQTGPDR*PTHYPPEPPHP
Trigger: AGGGTGGGGCGGCTCTGGAGGGTAGTGCGTTGGCCAACGGTCGGGCCCTGTCTGCTGGCTCCCCACCCGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341900.6
ENST00000361725.5
ENST00000475989.2
ENST00000550686.1
CDS CCA 72 bp ATCACTGGGGATTGGTCCGAGGCGCTCGGGCTCCGCTaGACTAGAGCGGGCGAGGCGGCCCGGCCTCGGGTA +
Preference number: 6 (lower is better)
Translates to: ITGDWSEALGLR*TRAGEAARPRV
Trigger: TACCCGAGGCCGGGCCGCCTCGCCCGCTCTAGTCCAGCGGAGCCCGAGCGCCTCGGACCAATCCCCAGTGAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361609.4
CDS CCA 72 bp AAGACCCGGGCGCAGGCCGGCCGCGGAAAGCCTGCGTaGCAGAACGGAGCGGCAGCGGCGAGGTACCTGAGT +
Preference number: 6 (lower is better)
Translates to: KTRAQAGRGKPA*QNGAAAARYLS
Trigger: ACTCAGGTACCTCGCCGCTGCCGCTCCGTTCTGCCACGCAGGCTTTCCGCGGCCGGCCTGCGCCCGGGTCTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409492.1
CDS TCA 72 bp GTAGGGGTAGCCCAGCGGTCGGGAGAAGGACGAGGCTaGGCTGTAGGCGCCGTCGGGCTGCGAATGGCCCGC +
Preference number: 6 (lower is better)
Translates to: VGVAQRSGEGRG*AVGAVGLRMAR
Trigger: GCGGGCCATTCGCAGCCCGACGGCGCCTACAGCTCAGCCTCGTCCTTCTCCCGACCGCTGGGCTACCCCTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341900.6
ENST00000361609.4
ENST00000361725.5
ENST00000409492.1
ENST00000469444.6
CDS GCA 72 bp AATGAAGACCCGGGCGCAGGCCGGCCGCGGAAAGCCTaGGTGGCAGAACGGAGCGGCAGCGGCGAGGTACCT +
Preference number: 6 (lower is better)
Translates to: NEDPGAGRPRKA*VAERSGSGEVP
Trigger: AGGTACCTCGCCGCTGCCGCTCCGTTCTGCCACGCAGGCTTTCCGCGGCCGGCCTGCGCCCGGGTCTTCATT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409492.1
CDS CCA 72 bp GAGGGGCCGCCTTTAGTGCGAACAGCCGAGAGCGAGTaGCTACCGAAGGGTGGCGGAGGCAGCACCAGGGAG +
Preference number: 6 (lower is better)
Translates to: EGPPLVRTAESE*LPKGGGGSTRE
Trigger: CTCCCTGGTGCTGCCTCCGCCACCCTTCGGTAGCCACTCGCTCTCGGCTGTTCGCACTAAAGGCGGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475989.2
CDS GCA 72 bp TTGCTCCAGGCCCAGCTGGCCACTCCAGCTCGAGGCTaGACGGGTCTGATTAAAGCAGTGCGCGTGGAGAGC +
Preference number: 6 (lower is better)
Translates to: LLQAQLATPARG*TGLIKAVRVES
Trigger: GCTCTCCACGCGCACTGCTTTAATCAGACCCGTGCAGCCTCGAGCTGGAGTGGCCAGCTGGGCCTGGAGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361609.4
ENST00000469444.6
CDS CCA 72 bp GGCGGAGCTGATTGGTCCGCTGTCTTGCATAATCACTaGGGATTGGTCCGAGGCGCTCGGGCTCCGCTGGAC +
Preference number: 6 (lower is better)
Translates to: GGADWSAVLHNH*GLVRGARAPLD
Trigger: GTCCAGCGGAGCCCGAGCGCCTCGGACCAATCCCCAGTGATTATGCAAGACAGCGGACCAATCAGCTCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361609.4
CDS TCA 72 bp GCCGCGAGCTCCGCCCTCTCCGGCAGAGCTAGGTACTaGGTTTGCTGGAACCTCCGGTTCAAAGCCTGCAAC +
Preference number: 6 (lower is better)
Translates to: AASSALSGRARY*VCWNLRFKACN
Trigger: GTTGCAGGCTTTGAACCGGAGGTTCCAGCAAACTCAGTACCTAGCTCTGCCGGAGAGGGCGGAGCTCGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361609.4
ENST00000361725.5
ENST00000409492.1
ENST00000469444.6
ENST00000475989.2
CDS GCA 72 bp CGGGTAGGACTGCACCGAACTGATGTAGGGGCTGGATaGGTGGCTGCTGACCGAGTTGACGTAGGGGTAGCC +
Preference number: 6 (lower is better)
Translates to: RVGLHRTDVGAG*VAADRVDVGVA
Trigger: GGCTACCCCTACGTCAACTCGGTCAGCAGCCACGCATCCAGCCCCTACATCAGTTCGGTGCAGTCCTACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341900.6
ENST00000361609.4
ENST00000361725.5
ENST00000409492.1
ENST00000469444.6
CDS CCA 72 bp CACCGCCTTGCCCGACACGGGGCTGTTGAGACTTTCTaGCATGGTGGTCATGGTCATCTCTTCTCGCGGGGT +
Preference number: 6 (lower is better)
Translates to: HRLARHGAVETF*HGGHGHLFSRG
Trigger: ACCCCGCGAGAAGAGATGACCATGACCACCATGCCAGAAAGTCTCAACAGCCCCGTGTCGGGCAAGGCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341900.6
ENST00000361609.4
ENST00000361725.5
ENST00000409492.1
ENST00000469444.6
CDS CCA 72 bp CTGATTGGTCCGCTGTCTTGCATAATCACTGGGGATTaGTCCGAGGCGCTCGGGCTCCGCTGGACTAGAGCG +
Preference number: 6 (lower is better)
Translates to: LIGPLSCIITGD*SEALGLRWTRA
Trigger: CGCTCTAGTCCAGCGGAGCCCGAGCGCCTCGGACCAATCCCCAGTGATTATGCAAGACAGCGGACCAATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361609.4
CDS CCA 72 bp AGTGCGAACAGCCGAGAGCGAGTGGCTACCGAAGGGTaGCGGAGGCAGCACCAGGGAGAGAACGTTCAAGAA +
Preference number: 6 (lower is better)
Translates to: SANSRERVATEG*RRQHQGENVQE
Trigger: TTCTTGAACGTTCTCTCCCTGGTGCTGCCTCCGCCACCCTTCGGTAGCCACTCGCTCTCGGCTGTTCGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475989.2
CDS CAA 72 bp ATCGTCTGGGGAAATCCTTCCTGCGCCCTAATCAGATaGTCCAGGGACAGAGGGCCGGACGGCAGGCAGCTC +
Preference number: 6 (lower is better)
Translates to: IVWGNPSCALIR*SRDRGPDGRQL
Trigger: GAGCTGCCTGCCGTCCGGCCCTCTGTCCCTGGACAATCTGATTAGGGCGCAGGAAGGATTTCCCCAGACGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409492.1
CDS CAA 90 bp GGCGGCCCAAACTCCATAAACACCGCCTTGCCCGACACGGGGCTGTaGAGACTTTCTGGCATGGTGGTCATGGTCATCTCTTCTCGCGGG +
Preference number: 6 (lower is better)
Translates to: GGPNSINTALPDTGL*RLSGMVVMVISSRG
Trigger: CCCGCGAGAAGAGATGACCATGACCACCATGCCAGAAAGTCTCAACAGCCCCGTGTCGGGCAAGGCGGTGTTTATGGAGTTTGGGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341900.6
ENST00000361609.4
ENST00000361725.5
ENST00000409492.1
ENST00000469444.6
CDS CAA 90 bp CCCAAACAAATCGTCTGGGGAAATCCTTCCTGCGCCCTAATCAGATaGTCCAGGGACAGAGGGCCGGACGGCAGGCAGCTCGGGATACCG +
Preference number: 6 (lower is better)
Translates to: PKQIVWGNPSCALIR*SRDRGPDGRQLGIP
Trigger: CGGTATCCCGAGCTGCCTGCCGTCCGGCCCTCTGTCCCTGGACAATCTGATTAGGGCGCAGGAAGGATTTCCCCAGACGATTTGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409492.1
CDS CAA 72 bp TGCTGGTTGGGCGGCCCAAACTCCATAAACACCGCCTaGCCCGACACGGGGCTGTTGAGACTTTCTGGCATG +
Preference number: 6 (lower is better)
Translates to: CWLGGPNSINTA*PDTGLLRLSGM
Trigger: CATGCCAGAAAGTCTCAACAGCCCCGTGTCGGGCAAGGCGGTGTTTATGGAGTTTGGGCCGCCCAACCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341900.6
ENST00000361609.4
ENST00000361725.5
ENST00000409492.1
ENST00000469444.6
CDS CAA 72 bp TGCCCGTGGGACATGGGAGAAGGAGACATTTGCTGGTaGGGCGGCCCAAACTCCATAAACACCGCCTTGCCC +
Preference number: 6 (lower is better)
Translates to: CPWDMGEGDICW*GGPNSINTALP
Trigger: GGGCAAGGCGGTGTTTATGGAGTTTGGGCCGCCCAACCAGCAAATGTCTCCTTCTCCCATGTCCCACGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341900.6
ENST00000361609.4
ENST00000361725.5
ENST00000409492.1
ENST00000469444.6
CDS CAA 90 bp GGAGACATTTGCTGGTTGGGCGGCCCAAACTCCATAAACACCGCCTaGCCCGACACGGGGCTGTTGAGACTTTCTGGCATGGTGGTCATG +
Preference number: 6 (lower is better)
Translates to: GDICWLGGPNSINTA*PDTGLLRLSGMVVM
Trigger: CATGACCACCATGCCAGAAAGTCTCAACAGCCCCGTGTCGGGCAAGGCGGTGTTTATGGAGTTTGGGCCGCCCAACCAGCAAATGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341900.6
ENST00000361609.4
ENST00000361725.5
ENST00000409492.1
ENST00000469444.6
CDS GCA 72 bp ATTCATGAGCTGGCGGAGCTGATTGGTCCGCTGTCTTaGATAATCACTGGGGATTGGTCCGAGGCGCTCGGG +
Preference number: 6 (lower is better)
Translates to: IHELAELIGPLS*IITGDWSEALG
Trigger: CCCGAGCGCCTCGGACCAATCCCCAGTGATTATGCAAGACAGCGGACCAATCAGCTCCGCCAGCTCATGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361609.4
CDS GCA 72 bp TTGGCCAACGCACTACCCTCCAGAGCCGCCCCACCCTaGTTCATCAGCTTCTTGAACTTGGATCGCTTGTTT +
Preference number: 6 (lower is better)
Translates to: LANALPSRAAPP*FISFLNLDRLF
Trigger: AAACAAGCGATCCAAGTTCAAGAAGCTGATGAAGCAGGGTGGGGCGGCTCTGGAGGGTAGTGCGTTGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341900.6
ENST00000361725.5
ENST00000475989.2
ENST00000550686.1
CDS GCA 72 bp ATTCTTGCACTAGTGTCTGTTTGCTTTCTCCAGCTCTaGTCCAAATCCCGGACCGGACGTCGGAAACCCGCG +
Preference number: 6 (lower is better)
Translates to: ILALVSVCFLQL*SKSRTGRRKPA
Trigger: CGCGGGTTTCCGACGTCCGGTCCGGGATTTGGAGCAGAGCTGGAGAAAGCAAACAGACACTAGTGCAAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550686.1
CDS CCA 72 bp AGTGTAAACAGTGCATGGAGTAGTGCCCGTGGGACATaGGAGAAGGAGACATTTGCTGGTTGGGCGGCCCAA +
Preference number: 6 (lower is better)
Translates to: SVNSAWSSARGT*EKETFAGWAAQ
Trigger: TTGGGCCGCCCAACCAGCAAATGTCTCCTTCTCCCATGTCCCACGGGCACTACTCCATGCACTGTTTACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341900.6
ENST00000361609.4
ENST00000361725.5
ENST00000409492.1
ENST00000469444.6
CDS CAA 72 bp AACTCCATAAACACCGCCTTGCCCGACACGGGGCTGTaGAGACTTTCTGGCATGGTGGTCATGGTCATCTCT +
Preference number: 6 (lower is better)
Translates to: NSINTALPDTGL*RLSGMVVMVIS
Trigger: AGAGATGACCATGACCACCATGCCAGAAAGTCTCAACAGCCCCGTGTCGGGCAAGGCGGTGTTTATGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341900.6
ENST00000361609.4
ENST00000361725.5
ENST00000409492.1
ENST00000469444.6
CDS CAA 72 bp CTTTGGATTCAAAACCATTCTTGCACTAGTGTCTGTTaGCTTTCTCCAGCTCTGCTCCAAATCCCGGACCGG +
Preference number: 6 (lower is better)
Translates to: LWIQNHSCTSVC*LSPALLQIPDR
Trigger: CCGGTCCGGGATTTGGAGCAGAGCTGGAGAAAGCAAACAGACACTAGTGCAAGAATGGTTTTGAATCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550686.1
CDS GCA 72 bp TTTGGATTCAAAACCATTCTTGCACTAGTGTCTGTTTaGTTTCTCCAGCTCTGCTCCAAATCCCGGACCGGA +
Preference number: 6 (lower is better)
Translates to: FGFKTILALVSV*FLQLCSKSRTG
Trigger: TCCGGTCCGGGATTTGGAGCAGAGCTGGAGAAAGCAAACAGACACTAGTGCAAGAATGGTTTTGAATCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550686.1