Pregenerated sensors for DLST (Homo sapiens)
Ensembl gene IDs: ENSG00000119689Ensembl transcript IDs: ENST00000555071.5, ENST00000555459.5, ENST00000555988.1, ENST00000556190.5, ENST00000556582.5
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | CAGGAGCAGCTTGACCACCAGGAGAACTTCTTTACCACCAGTTTTCCTGAGTGTACCTGCACAGATGTCTaGTCAGTTTCAATCTCACAA | + |
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Preference number: 3 (lower is better) Translates to: QEQLDHQENFFTTSFPECTCTDV*SVSISQ Trigger: TTGTGAGATTGAAACTGACAAGACATCTGTGCAGGT...ACACTCAGGAAAACTGGTGGTAAAGAAGTTCTCCTGGTGGTCAAGCTGCTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555988.1 |
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| CDS-3UTR CCA 90 bp | CAGGAGCAGCTTGACCACCAGGAGAACTTCTTTACCACCAGTTTTCCTGAGTGTGCATCTGAGTGGGTATaGGTGCTGCAGGGGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QEQLDHQENFFTTSFPECASEWV*VLQGEE Trigger: TTCCTCCCCCTGCAGCACCCATACCCACTCAGATGC...ACACTCAGGAAAACTGGTGGTAAAGAAGTTCTCCTGGTGGTCAAGCTGCTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555988.1 |
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| CDS-3UTR TCA 90 bp | CAGGAGCAGCTTGACCACCAGGAGAACTTCTTTACCACCAGTTTTCCTGAGTGTTTAGCAGGAGCAGCTTaGCCACCAGGAGAACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QEQLDHQENFFTTSFPECLAGAA*PPGELL Trigger: AAGAAGTTCTCCTGGTGGTCAAGCTGCTCCTGCTAA...ACACTCAGGAAAACTGGTGGTAAAGAAGTTCTCCTGGTGGTCAAGCTGCTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555988.1 |
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| CDS-3UTR GCA 90 bp | CAGGAGCAGCTTGACCACCAGGAGAACTTCTTTACCACCAGTTTTCCTGAGTGTAACAGTGGGTTTTACTaGAGACACAGGTTTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QEQLDHQENFFTTSFPECNSGFY*RHRFAR Trigger: TCTGGCAAACCTGTGTCTGCAGTAAAACCCACTGTT...ACACTCAGGAAAACTGGTGGTAAAGAAGTTCTCCTGGTGGTCAAGCTGCTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555988.1 |
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| CDS-3UTR TCA 90 bp | CAGGAGCAGCTTGACCACCAGGAGAACTTCTTTACCACCAGTTTTCCTGAGTGTTGTGTCTCCAACAGCTaGAAAGACAATCAAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QEQLDHQENFFTTSFPECCVSNS*KDNQRL Trigger: AAGCCTTTGATTGTCTTTTCAGCTGTTGGAGACACA...ACACTCAGGAAAACTGGTGGTAAAGAAGTTCTCCTGGTGGTCAAGCTGCTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555988.1 |
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| CDS-3UTR CAA 90 bp | CAGGAGCAGCTTGACCACCAGGAGAACTTCTTTACCACCAGTTTTCCTGAGTGTCTTAGCAGGAGCAGCTaGACCACCAGGAGAACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QEQLDHQENFFTTSFPECLSRSS*TTRRTS Trigger: AGAAGTTCTCCTGGTGGTCAAGCTGCTCCTGCTAAG...ACACTCAGGAAAACTGGTGGTAAAGAAGTTCTCCTGGTGGTCAAGCTGCTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555988.1 |
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| CDS-3UTR CAA 90 bp | CAGGAGCAGCTTGACCACCAGGAGAACTTCTTTACCACCAGTTTTCCTGAGTGTGTAACCAAGTCATCCTaGCATACAGCTGTAGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QEQLDHQENFFTTSFPECVTKSS*HTAVVL Trigger: CAGAACTACAGCTGTATGCAAGGATGACTTGGTTAC...ACACTCAGGAAAACTGGTGGTAAAGAAGTTCTCCTGGTGGTCAAGCTGCTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555988.1 |
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| CDS TCA 90 bp | CCCCTTATTCCCTCAACTAAGGGCAGCTGGAATGACAAGAGTCTTTaGCATATCGGGGAATTAGCACATTATGCTCAGTCCCAATCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PLIPSTKGSWNDKSL*HIGELAHYAQSQSQ Trigger: TTGGGATTGGGACTGAGCATAATGTGCTAATTCCCCGATATGTCAAAGACTCTTGTCATTCCAGCTGCCCTTAGTTGAGGGAATAAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000555071.5 ENST00000555459.5 |
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| CDS CCA 90 bp | TTATTTCCCAGCCTTCTACCATACATGTTTTCTACTCTGAGCTTCTaGTCTTGCCTGACTAACCTCAATCATGCGGTCTATCTGCCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: LFPSLLPYMFSTLSF*SCLTNLNHAVYLPY Trigger: ATAAGGCAGATAGACCGCATGATTGAGGTTAGTCAGGCAAGACCAGAAGCTCAGAGTAGAAAACATGTATGGTAGAAGGCTGGGAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555071.5 |
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| CDS GCA 90 bp | GATGCTCTCAATCTCCACAATAAATGTAACCTCGAGCCTTTCAGCTaGACTTACATCCAAACAGAATATCTAGGAGCACCCTTCTATATC | + |
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Preference number: 5 (lower is better) Translates to: DALNLHNKCNLEPFS*TYIQTEYLGAPFYI Trigger: GATATAGAAGGGTGCTCCTAGATATTCTGTTTGGATGTAAGTGCAGCTGAAAGGCTCGAGGTTACATTTATTGTGGAGATTGAGAGCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556190.5 |
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| CDS CAA 72 bp | GCTCAGTCCCAATCCCAAGAGGGAACACTGGAGACCTaGACCACCAGGAGAACTTCTTTACCACCAGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: AQSQSQEGTLET*TTRRTSLPPVF Trigger: GAAAACTGGTGGTAAAGAAGTTCTCCTGGTGGTCAAGGTCTCCAGTGTTCCCTCTTGGGATTGGGACTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000555071.5 ENST00000555459.5 ENST00000556582.5 |
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| CDS CAA 90 bp | GCACATTATGCTCAGTCCCAATCCCAAGAGGGAACACTGGAGACCTaGACCACCAGGAGAACTTCTTTACCACCAGTTTTCCTGAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AHYAQSQSQEGTLET*TTRRTSLPPVFLSV Trigger: CACACTCAGGAAAACTGGTGGTAAAGAAGTTCTCCTGGTGGTCAAGGTCTCCAGTGTTCCCTCTTGGGATTGGGACTGAGCATAATGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000555071.5 ENST00000555459.5 ENST00000556582.5 |
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| CDS TCA 72 bp | CCCTCAACTAAGGGCAGCTGGAATGACAAGAGTCTTTaGCATATCGGGGAATTAGCACATTATGCTCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: PSTKGSWNDKSL*HIGELAHYAQS Trigger: GGACTGAGCATAATGTGCTAATTCCCCGATATGTCAAAGACTCTTGTCATTCCAGCTGCCCTTAGTTGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555071.5 ENST00000555459.5 |
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| CDS GCA 72 bp | CTACCATACATGTTTTCTACTCTGAGCTTCTGGTCTTaGCTGACTAACCTCAATCATGCGGTCTATCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LPYMFSTLSFWS*LTNLNHAVYLP Trigger: AGGCAGATAGACCGCATGATTGAGGTTAGTCAGGCAAGACCAGAAGCTCAGAGTAGAAAACATGTATGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555071.5 |
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| CDS GCA 72 bp | AATCTCCACAATAAATGTAACCTCGAGCCTTTCAGCTaGACTTACATCCAAACAGAATATCTAGGAGCACCC | + |
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Preference number: 6 (lower is better) Translates to: NLHNKCNLEPFS*TYIQTEYLGAP Trigger: GGGTGCTCCTAGATATTCTGTTTGGATGTAAGTGCAGCTGAAAGGCTCGAGGTTACATTTATTGTGGAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556190.5 |
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| CDS GCA 72 bp | GACATTATATCCAGGGTTAGTGCTAAGACAAACTTCTaGAACAGGAGGACTACCTTATTTCCCAGCCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: DIISRVSAKTNF*NRRTTLFPSLL Trigger: TAGAAGGCTGGGAAATAAGGTAGTCCTCCTGTTGCAGAAGTTTGTCTTAGCACTAACCCTGGATATAATGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555071.5 |
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