RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DLL4 (Homo sapiens)

Ensembl gene IDs: ENSG00000128917

Ensembl transcript IDs: ENST00000249749.7, ENST00000557876.1, ENST00000559440.1

Found 271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACACTGCCCTGAGTGCCCCAGTTAGGCCTGGCACCCTTGGCTGGTaGGAGGGGCAGGCCCTCTGCCTGTCTGCTTACAGAAGCCCAGGG +
Preference number: 1 (lower is better)
Translates to: HTALSAPVRPGTLGW*EGQALCLSAYRSPG
Trigger: CCCTGGGCTTCTGTAAGCAGACAGGCAGAGGGCCTGCCCCTCCCACCAGCCAAGGGTGCCAGGCCTAACTGGGGCACTCAGGGCAGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR TCA 90 bp GCAGTAGTGGACCAGAGCCCAGGCTCGAGGTTGTGGAGATGGGCTTaGGGGAGGAAAGGGCCCAGGCGGCCGCAGCACCTGATTTCCCCC +
Preference number: 1 (lower is better)
Translates to: AVVDQSPGSRLWRWA*GRKGPRRPQHLISP
Trigger: GGGGGAAATCAGGTGCTGCGGCCGCCTGGGCCCTTTCCTCCCTCAAGCCCATCTCCACAACCTCGAGCCTGGGCTCTGGTCCACTACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CCA 90 bp CAACACACTGCCCTGAGTGCCCCAGTTAGGCCTGGCACCCTTGGCTaGTGGGAGGGGCAGGCCCTCTGCCTGTCTGCTTACAGAAGCCCA +
Preference number: 1 (lower is better)
Translates to: QHTALSAPVRPGTLG*WEGQALCLSAYRSP
Trigger: TGGGCTTCTGTAAGCAGACAGGCAGAGGGCCTGCCCCTCCCACCAGCCAAGGGTGCCAGGCCTAACTGGGGCACTCAGGGCAGTGTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CCA 90 bp ATTTGGGCCCAACTGTCGCCGTGGAGCCTGGGCCAAAGGCACTTTTaGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCA +
Preference number: 1 (lower is better)
Translates to: IWAQLSPWSLGQRHF*KHGCQWRPQQLRAP
Trigger: TGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCCTTTGGCCCAGGCTCCACGGCGACAGTTGGGCCCAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CCA 90 bp CACAGGAGGCCCTGCCCTCATTGGCCCCCTCTCTCCTTTCTGATTTaGGCCCAACTGTCGCCGTGGAGCCTGGGCCAAAGGCACTTTTGG +
Preference number: 1 (lower is better)
Translates to: HRRPCPHWPPLSFLI*AQLSPWSLGQRHFW
Trigger: CCAAAAGTGCCTTTGGCCCAGGCTCCACGGCGACAGTTGGGCCCAAATCAGAAAGGAGAGAGGGGGCCAATGAGGGCAGGGCCTCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CCA 90 bp GGCCCTCTGCCTGTCTGCTTACAGAAGCCCAGGGCCAGAGGGTGGTaGAAGCCGGGTAGACGGACATTCTTGCCCAAAGGGCCTAGACCA +
Preference number: 1 (lower is better)
Translates to: GPLPVCLQKPRARGW*KPGRRTFLPKGPRP
Trigger: TGGTCTAGGCCCTTTGGGCAAGAATGTCCGTCTACCCGGCTTCCACCACCCTCTGGCCCTGGGCTTCTGTAAGCAGACAGGCAGAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CCA 90 bp GCAGGCCCTCTGCCTGTCTGCTTACAGAAGCCCAGGGCCAGAGGGTaGTGGAAGCCGGGTAGACGGACATTCTTGCCCAAAGGGCCTAGA +
Preference number: 1 (lower is better)
Translates to: AGPLPVCLQKPRARG*WKPGRRTFLPKGPR
Trigger: TCTAGGCCCTTTGGGCAAGAATGTCCGTCTACCCGGCTTCCACCACCCTCTGGCCCTGGGCTTCTGTAAGCAGACAGGCAGAGGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CCA 90 bp CATTGGCCCCCTCTCTCCTTTCTGATTTGGGCCCAACTGTCGCCGTaGAGCCTGGGCCAAAGGCACTTTTGGAAACACGGATGCCAGTGG +
Preference number: 1 (lower is better)
Translates to: HWPPLSFLIWAQLSP*SLGQRHFWKHGCQW
Trigger: CCACTGGCATCCGTGTTTCCAAAAGTGCCTTTGGCCCAGGCTCCACGGCGACAGTTGGGCCCAAATCAGAAAGGAGAGAGGGGGCCAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CCA 90 bp AGGGCAGTGCCCAGTGGCATCTCTCTTCTCTTCTGTTCCTCTGGTTaGTGCAGCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTG +
Preference number: 1 (lower is better)
Translates to: RAVPSGISLLFCSSG*CSCQSDARQTPKGV
Trigger: CACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCACCAACCAGAGGAACAGAAGAGAAGAGAGATGCCACTGGGCACTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR GCA 90 bp GCAGTGCCCAGTGGCATCTCTCTTCTCTTCTGTTCCTCTGGTTGGTaGAGCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTGGAA +
Preference number: 1 (lower is better)
Translates to: AVPSGISLLFCSSGW*SCQSDARQTPKGVE
Trigger: TTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCACCAACCAGAGGAACAGAAGAGAAGAGAGATGCCACTGGGCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CCA 90 bp GATGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTGCATCTCTTaGCAAGTTCACAGTCTGTCCGGTTCCTGCCATTCCCTCCTCCTC +
Preference number: 1 (lower is better)
Translates to: DARQTPKGVEGYCIS*QVHSLSGSCHSLLL
Trigger: GAGGAGGAGGGAATGGCAGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR GCA 90 bp CCCAGTGGCATCTCTCTTCTCTTCTGTTCCTCTGGTTGGTGCAGCTaGCAATCTGATGCCAGACAGACACCCAAAGGTGTGGAAGGGTAT +
Preference number: 1 (lower is better)
Translates to: PSGISLLFCSSGWCS*QSDARQTPKGVEGY
Trigger: ATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCACCAACCAGAGGAACAGAAGAGAAGAGAGATGCCACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR GCA 90 bp TGCCAATCTGATGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTaGATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCCTGCCATTCC +
Preference number: 1 (lower is better)
Translates to: CQSDARQTPKGVEGY*ISWQVHSLSGSCHS
Trigger: GGAATGGCAGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CCA 90 bp GTTGGTGCAGCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTaGAAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTT +
Preference number: 1 (lower is better)
Translates to: VGAAANLMPDRHPKV*KGIASLGKFTVCPV
Trigger: AACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCACCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR TCA 90 bp CATCTCTCTTCTCTTCTGTTCCTCTGGTTGGTGCAGCTGCCAATCTaGTGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTGCATCTC +
Preference number: 1 (lower is better)
Translates to: HLSSLLFLWLVQLPI*CQTDTQRCGRVLHL
Trigger: GAGATGCAATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCACCAACCAGAGGAACAGAAGAGAAGAGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR TCA 90 bp GGTTCCTGCCATTCCCTCCTCCTCCTGAGAGCAGCACGTTGCATATaGAAAACGTCCCATCCAGGATGCAATGTAAACAATGCAGAAGGA +
Preference number: 1 (lower is better)
Translates to: GSCHSLLLLRAARCI*KTSHPGCNVNNAEG
Trigger: TCCTTCTGCATTGTTTACATTGCATCCTGGATGGGACGTTTTTCATATGCAACGTGCTGCTCTCAGGAGGAGGAGGGAATGGCAGGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR-3UTR TCA 90 bp TTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTACCGGAAGGAGCCCCCTaGAGGCCACTACTGGCAGGG +
Preference number: 2 (lower is better)
Translates to: LETRMPVEATAAPGPMGLPEGAP*RPLLAG
Trigger: CCCTGCCAGTAGTGGCCTTCAGGGGGCTCCTTCCGG...TAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CAA 90 bp GATTTGGGCCCAACTGTCGCCGTGGAGCCTGGGCCAAAGGCACTTTaGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCC +
Preference number: 2 (lower is better)
Translates to: DLGPTVAVEPGPKAL*ETRMPVEATAAPGP
Trigger: GGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCCTTTGGCCCAGGCTCCACGGCGACAGTTGGGCCCAAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR-3UTR GCA 90 bp CCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTACTGCCACTCTCTCTGAGTCTGTCCGGTTCCTaGCATTCCCTCCTCCTCCTG +
Preference number: 2 (lower is better)
Translates to: PVEATAAPGPMGLLPLSLSLSGS*HSLLLL
Trigger: CAGGAGGAGGAGGGAATGGCAGGAACCGGACAGACT...CAGAGAGAGTGGCAGTAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR-3UTR TCA 90 bp CCGGAGCCCCGGAAGGAGCCCCCTGAAGGCCACTACTGGCAGGGCAGTGCCCAGGCAGCACGTTGCATATaGAAAACGTCCCATCCAGGA +
Preference number: 2 (lower is better)
Translates to: PEPRKEPPEGHYWQGSAQAARCI*KTSHPG
Trigger: TCCTGGATGGGACGTTTTTCATATGCAACGTGCTGC...CTGGGCACTGCCCTGCCAGTAGTGGCCTTCAGGGGGCTCCTTCCGGGGCTCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR-3UTR GCA 90 bp CTGGTGGGAGGGGCAGGCCCTCTGCCTGTCTGCTTACAGAAGCCCAGGGCCAGACTACTGGCAGGGCAGTaGCCAGTGGCATCTCTCTTC +
Preference number: 2 (lower is better)
Translates to: LVGGAGPLPVCLQKPRARLLAGQ*PVASLF
Trigger: GAAGAGAGATGCCACTGGGCACTGCCCTGCCAGTAG...TCTGGCCCTGGGCTTCTGTAAGCAGACAGGCAGAGGGCCTGCCCCTCCCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CAA 90 bp CCACAGGAGGCCCTGCCCTCATTGGCCCCCTCTCTCCTTTCTGATTaGGGCCCAACTGTCGCCGTGGAGCCTGGGCCAAAGGCACTTTTG +
Preference number: 2 (lower is better)
Translates to: PQEALPSLAPSLLSD*GPTVAVEPGPKALL
Trigger: CAAAAGTGCCTTTGGCCCAGGCTCCACGGCGACAGTTGGGCCCAAATCAGAAAGGAGAGAGGGGGCCAATGAGGGCAGGGCCTCCTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR-3UTR TCA 90 bp ACTCACCTCACCTCCAGGGCAAACCCCAGCAAGAGACGCACCCAGTGGTTTTCCCCCCTCTCTCCTTTCTaGTTTGGGCCCAACTGTCGC +
Preference number: 2 (lower is better)
Translates to: THLTSRANPSKRRTQWFSPLSPF*FGPNCR
Trigger: GCGACAGTTGGGCCCAAATCAGAAAGGAGAGAGGGG...GGAAAACCACTGGGTGCGTCTCTTGCTGGGGTTTGCCCTGGAGGTGAGGTGAGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR-3UTR GCA 90 bp CCTCATTGGCCCCCTCTCTCCTTTCTGATTTGGGCCCAACTGTCGCCGTGGAGCTCTGGTTGGTGCAGCTaGCAATCTGATGCCAGACAG +
Preference number: 2 (lower is better)
Translates to: PHWPPLSFLIWAQLSPWSSGWCS*QSDARQ
Trigger: CTGTCTGGCATCAGATTGGCAGCTGCACCAACCAGA...GCTCCACGGCGACAGTTGGGCCCAAATCAGAAAGGAGAGAGGGGGCCAATGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR-3UTR GCA 90 bp GCCAAAGGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGTGTTCCTCTGGTTGGTaGAGCTGCCAATCTGATGCC +
Preference number: 2 (lower is better)
Translates to: AKGTFGNTDASGGHSSSGCSSGW*SCQSDA
Trigger: GGCATCAGATTGGCAGCTGCACCAACCAGAGGAACA...CCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR-3UTR TCA 90 bp CTGAAGGCCACTACTGGCAGGGCAGTGCCCAGTGGCATCTCTCTTCTCTTCTGTGTGCAGCTGCCAATCTaGTGCCAGACAGACACCCAA +
Preference number: 2 (lower is better)
Translates to: LKATTGRAVPSGISLLFCVQLPI*CQTDTQ
Trigger: TTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCAC...ACAGAAGAGAAGAGAGATGCCACTGGGCACTGCCCTGCCAGTAGTGGCCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR-3UTR CCA 90 bp ACTCACCTCACCTCCAGGGCAAACCCCAGCAAGAGACGCACCCAGTGGTTTTCCTTCTGTTCCTCTGGTTaGTGCAGCTGCCAATCTGAT +
Preference number: 2 (lower is better)
Translates to: THLTSRANPSKRRTQWFSFCSSG*CSCQSD
Trigger: ATCAGATTGGCAGCTGCACCAACCAGAGGAACAGAA...GGAAAACCACTGGGTGCGTCTCTTGCTGGGGTTTGCCCTGGAGGTGAGGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR-3UTR GCA 90 bp TTCTCTTCTGTTCCTCTGGTTGGTGCAGCTGCCAATCTGATGCCAGACAGACACATGCAATGTAAACAATaGAGAAGGAAGGTCCAGCCG +
Preference number: 2 (lower is better)
Translates to: FSSVPLVGAAANLMPDRHMQCKQ*RRKVQP
Trigger: CGGCTGGACCTTCCTTCTGCATTGTTTACATTGCAT...GTGTCTGTCTGGCATCAGATTGGCAGCTGCACCAACCAGAGGAACAGAAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR TCA 72 bp GACCAGAGCCCAGGCTCGAGGTTGTGGAGATGGGCTTaGGGGAGGAAAGGGCCCAGGCGGCCGCAGCACCTG +
Preference number: 3 (lower is better)
Translates to: DQSPGSRLWRWA*GRKGPRRPQHL
Trigger: CAGGTGCTGCGGCCGCCTGGGCCCTTTCCTCCCTCAAGCCCATCTCCACAACCTCGAGCCTGGGCTCTGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CCA 72 bp GGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATaGGGCTACTGCCACTCTCTCTGGAAAACAGGCCGG +
Preference number: 3 (lower is better)
Translates to: GCQWRPQQLRAP*GYCHSLWKTGR
Trigger: CCGGCCTGTTTTCCAGAGAGAGTGGCAGTAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CCA 72 bp CCGGAGCCCCGGAAGGAGCCCCCTGAAGGCCACTACTaGCAGGGCAGTGCCCAGTGGCATCTCTCTTCTCTT +
Preference number: 3 (lower is better)
Translates to: PEPRKEPPEGHY*QGSAQWHLSSL
Trigger: AAGAGAAGAGAGATGCCACTGGGCACTGCCCTGCCAGTAGTGGCCTTCAGGGGGCTCCTTCCGGGGCTCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR GCA 72 bp CCAGAGGGTGGTGGAAGCCGGGTAGACGGACATTCTTaGCCAAAGGGCCTAGACCAGAGAGCCAGGCCTGCA +
Preference number: 3 (lower is better)
Translates to: PEGGGSRVDGHS*PKGLDQRARPA
Trigger: TGCAGGCCTGGCTCTCTGGTCTAGGCCCTTTGGGCAAGAATGTCCGTCTACCCGGCTTCCACCACCCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR TCA 72 bp CTTGAGGGAGGAAAGGGCCCAGGCGGCCGCAGCACCTaGTTTCCCCCTCAGTGGAATTTCCAACACACTGCC +
Preference number: 3 (lower is better)
Translates to: LEGGKGPGGRST*FPPQWNFQHTA
Trigger: GGCAGTGTGTTGGAAATTCCACTGAGGGGGAAATCAGGTGCTGCGGCCGCCTGGGCCCTTTCCTCCCTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CCA 72 bp CAACTGTCGCCGTGGAGCCTGGGCCAAAGGCACTTTTaGAAACACGGATGCCAGTGGAGGCCACAGCAGCTC +
Preference number: 3 (lower is better)
Translates to: QLSPWSLGQRHF*KHGCQWRPQQL
Trigger: GAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCCTTTGGCCCAGGCTCCACGGCGACAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CCA 72 bp CCTGTCTGCTTACAGAAGCCCAGGGCCAGAGGGTGGTaGAAGCCGGGTAGACGGACATTCTTGCCCAAAGGG +
Preference number: 3 (lower is better)
Translates to: PVCLQKPRARGW*KPGRRTFLPKG
Trigger: CCCTTTGGGCAAGAATGTCCGTCTACCCGGCTTCCACCACCCTCTGGCCCTGGGCTTCTGTAAGCAGACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CCA 72 bp CTGCCTGTCTGCTTACAGAAGCCCAGGGCCAGAGGGTaGTGGAAGCCGGGTAGACGGACATTCTTGCCCAAA +
Preference number: 3 (lower is better)
Translates to: LPVCLQKPRARG*WKPGRRTFLPK
Trigger: TTTGGGCAAGAATGTCCGTCTACCCGGCTTCCACCACCCTCTGGCCCTGGGCTTCTGTAAGCAGACAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR-3UTR CAA 90 bp GCCAAAGGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCTGAGAGCAGCACGTaGCATATGAAAAACGTCCCA +
Preference number: 3 (lower is better)
Translates to: AKGTFGNTDASGGHSSSGPESST*HMKNVP
Trigger: TGGGACGTTTTTCATATGCAACGTGCTGCTCTCAGG...CCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCCTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR GCA 72 bp TGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCCTaGCATTCCCTCCTCCTCCTGAGAGCAGCACGTTGC +
Preference number: 3 (lower is better)
Translates to: CISWQVHSLSGS*HSLLLLRAARC
Trigger: GCAACGTGCTGCTCTCAGGAGGAGGAGGGAATGGCAGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CCA 72 bp CCTCTCTCCTTTCTGATTTGGGCCCAACTGTCGCCGTaGAGCCTGGGCCAAAGGCACTTTTGGAAACACGGA +
Preference number: 3 (lower is better)
Translates to: PLSFLIWAQLSP*SLGQRHFWKHG
Trigger: TCCGTGTTTCCAAAAGTGCCTTTGGCCCAGGCTCCACGGCGACAGTTGGGCCCAAATCAGAAAGGAGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR-3UTR CAA 90 bp CACCTCCAGGGCAAACCCCAGCAAGAGACGCACCCAGTGGTTTTCCAGCCCACAAGGGTATTGCATCTCTaGGCAAGTTCACAGTCTGTC +
Preference number: 3 (lower is better)
Translates to: HLQGKPQQETHPVVFQPTRVLHL*ASSQSV
Trigger: GACAGACTGTGAACTTGCCAAGAGATGCAATACCCT...TGTGGGCTGGAAAACCACTGGGTGCGTCTCTTGCTGGGGTTTGCCCTGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR TCA 72 bp TCTCTTCTGTTCCTCTGGTTGGTGCAGCTGCCAATCTaGTGCCAGACAGACACCCAAAGGTGTGGAAGGGTA +
Preference number: 3 (lower is better)
Translates to: SLLFLWLVQLPI*CQTDTQRCGRV
Trigger: TACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCACCAACCAGAGGAACAGAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR GCA 72 bp GATGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTaGATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCC +
Preference number: 3 (lower is better)
Translates to: DARQTPKGVEGY*ISWQVHSLSGS
Trigger: GGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CCA 72 bp CAGACACCCAAAGGTGTGGAAGGGTATTGCATCTCTTaGCAAGTTCACAGTCTGTCCGGTTCCTGCCATTCC +
Preference number: 3 (lower is better)
Translates to: QTPKGVEGYCIS*QVHSLSGSCHS
Trigger: GGAATGGCAGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTTTGGGTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR GCA 72 bp ATCTCTCTTCTCTTCTGTTCCTCTGGTTGGTGCAGCTaGCAATCTGATGCCAGACAGACACCCAAAGGTGTG +
Preference number: 3 (lower is better)
Translates to: ISLLFCSSGWCS*QSDARQTPKGV
Trigger: CACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCACCAACCAGAGGAACAGAAGAGAAGAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CCA 72 bp GCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTaGAAGGGTATTGCATCTCTTGGCAAGTTCACAGTC +
Preference number: 3 (lower is better)
Translates to: AANLMPDRHPKV*KGIASLGKFTV
Trigger: GACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR TCA 72 bp CATTCCCTCCTCCTCCTGAGAGCAGCACGTTGCATATaGAAAACGTCCCATCCAGGATGCAATGTAAACAAT +
Preference number: 3 (lower is better)
Translates to: HSLLLLRAARCI*KTSHPGCNVNN
Trigger: ATTGTTTACATTGCATCCTGGATGGGACGTTTTTCATATGCAACGTGCTGCTCTCAGGAGGAGGAGGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CCGGAGCCCCGGAAGGAGCCCCCTGAAGGCCACTACTGGCAGGGCAGTGCCCAGGCCCACAGGAGGCCCTaGCCTCATTGGCCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: PEPRKEPPEGHYWQGSAQAHRRP*PHWPPL
Trigger: GAGAGGGGGCCAATGAGGGCAGGGCCTCCTGTGGGC...CTGGGCACTGCCCTGCCAGTAGTGGCCTTCAGGGGGCTCCTTCCGGGGCTCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp CCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTACTGCCACTCTCTCTGGGCAGGAGCCCCCATTaGAGCAGGGGGAGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: PVEATAAPGPMGLLPLSLGRSPH*SRGSRR
Trigger: GCGCCGACTCCCCCTGCTTCAATGGGGGCTCCTGCC...CAGAGAGAGTGGCAGTAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp CCGGAGCCCCGGAAGGAGCCCCCTGAAGGCCACTACTGGCAGGGCAGTGCCCAGCAGCTCCGGGCCCCATaGGGCTACTGCCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: PEPRKEPPEGHYWQGSAQQLRAP*GYCHSL
Trigger: GAGAGAGTGGCAGTAGCCCCATGGGGCCCGGAGCTG...CTGGGCACTGCCCTGCCAGTAGTGGCCTTCAGGGGGCTCCTTCCGGGGCTCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp CCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTACTGCCACTCTCTCTGAGCCGGCGGGGTCCCTaGAAAGAGGCGCTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: PVEATAAPGPMGLLPLSLSRRGP*KEALLS
Trigger: CGAGAGGAGCGCCTCTTTTCAGGGACCCCGCCGGCT...CAGAGAGAGTGGCAGTAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTACTGCCACTCTCTCTGTTACACAGCCGGCCCTaGCAGCCTGGGCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PVEATAAPGPMGLLPLSLLHSRP*QPGRQR
Trigger: CCTCTGCCGCCCAGGCTGGCAGGGCCGGCTGTGTAA...CAGAGAGAGTGGCAGTAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CCGGAGCCCCGGAAGGAGCCCCCTGAAGGCCACTACTGGCAGGGCAGTGCCCAGATTGCCAGGGAGTGCTaGAGGTGCCGTGGCGACAGC +
Preference number: 4 (lower is better)
Translates to: PEPRKEPPEGHYWQGSAQIAREC*RCRGDS
Trigger: GCTGTCGCCACGGCACCTGCAGCACTCCCTGGCAAT...CTGGGCACTGCCCTGCCAGTAGTGGCCTTCAGGGGGCTCCTTCCGGGGCTCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CCGGAGCCCCGGAAGGAGCCCCCTGAAGGCCACTACTGGCAGGGCAGTGCCCAGTGTTCATGGCTTCCCTaGTGCCGTCGTCCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: PEPRKEPPEGHYWQGSAQCSWLP*CRRPAV
Trigger: GACGGCCGGACGACGGCAGCAGGGAAGCCATGAACA...CTGGGCACTGCCCTGCCAGTAGTGGCCTTCAGGGGGCTCCTTCCGGGGCTCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp GGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATCCAGGTGACTACGGCTaGGCGGCGACCGCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GTFGNTDASGGHSSSGPHPGDYG*AATAPR
Trigger: CCTCGGCGCGGTCGCCGCCCAGCCGTAGTCACCTGG...ATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp CCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTACTGCCACTCTCTCTGGGCACTGTCCCCCGTTaGCACAGGGGTTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PVEATAAPGPMGLLPLSLGTVPR*HRGCWC
Trigger: GCACCAGCAACCCCTGTGCCAACGGGGGACAGTGCC...CAGAGAGAGTGGCAGTAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CCGGAGCCCCGGAAGGAGCCCCCTGAAGGCCACTACTGGCAGGGCAGTGCCCAGACGACCGCCTGGAAGTaGTTAAGGCAGACGCGGAAG +
Preference number: 4 (lower is better)
Translates to: PEPRKEPPEGHYWQGSAQTTAWK*LRQTRK
Trigger: CTTCCGCGTCTGCCTTAAGCACTTCCAGGCGGTCGT...CTGGGCACTGCCCTGCCAGTAGTGGCCTTCAGGGGGCTCCTTCCGGGGCTCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CTGGTGGGAGGGGCAGGCCCTCTGCCTGTCTGCTTACAGAAGCCCAGGGCCAGAAGACGGTCCCGAAGGTaGAGGGTCCGGGCGAGACGA +
Preference number: 4 (lower is better)
Translates to: LVGGAGPLPVCLQKPRARRRSRR*RVRARR
Trigger: TCGTCTCGCCCGGACCCTGCACCTTCGGGACCGTCT...TCTGGCCCTGGGCTTCTGTAAGCAGACAGGCAGAGGGCCTGCCCCTCCCACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTACTGCCACTCTCTCTGGGCCCTCTGCCTGTCTaGTTACAGAAGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PVEATAAPGPMGLLPLSLGPLPV*LQKPRA
Trigger: GGCCCTGGGCTTCTGTAAGCAGACAGGCAGAGGGCC...CAGAGAGAGTGGCAGTAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp CCTCATTGGCCCCCTCTCTCCTTTCTGATTTGGGCCCAACTGTCGCCGTGGAGCCCGGCCCTGCCAGCCTaGGCGGCAGAGGCACTCTGC +
Preference number: 4 (lower is better)
Translates to: PHWPPLSFLIWAQLSPWSPALPA*AAEALC
Trigger: GCAGAGTGCCTCTGCCGCCCAGGCTGGCAGGGCCGG...GCTCCACGGCGACAGTTGGGCCCAAATCAGAAAGGAGAGAGGGGGCCAATGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp CACCTCCAGGGCAAACCCCAGCAAGAGACGCACCCAGTGGTTTTCCAGCCCACACCACCCAGGGGAAGCTaGGCGGCAAGCCCACGGGGA +
Preference number: 4 (lower is better)
Translates to: HLQGKPQQETHPVVFQPTPPRGS*AASPRG
Trigger: TCCCCGTGGGCTTGCCGCCCAGCTTCCCCTGGGTGG...TGTGGGCTGGAAAACCACTGGGTGCGTCTCTTGCTGGGGTTTGCCCTGGAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp CCGGAGCCCCGGAAGGAGCCCCCTGAAGGCCACTACTGGCAGGGCAGTGCCCAGCCGACAAGTTGTTCATaGCTTCCCTGCTGCCGTCGT +
Preference number: 4 (lower is better)
Translates to: PEPRKEPPEGHYWQGSAQPTSCS*LPCCRR
Trigger: ACGACGGCAGCAGGGAAGCCATGAACAACTTGTCGG...CTGGGCACTGCCCTGCCAGTAGTGGCCTTCAGGGGGCTCCTTCCGGGGCTCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp CCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTACTGCCACTCTCTCTGAAACACGGATGCCAGTaGAGGCCACAGCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PVEATAAPGPMGLLPLSLKHGCQ*RPQQLR
Trigger: CCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTT...CAGAGAGAGTGGCAGTAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp TTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTAGCCCAACTGTCGCCGTaGAGCCTGGGCCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: LETRMPVEATAAPGPMGLAQLSP*SLGQRH
Trigger: GTGCCTTTGGCCCAGGCTCCACGGCGACAGTTGGGC...TAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp GGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATCACAGTAGGTGCCCGTaGATCCAGGACGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GTFGNTDASGGHSSSGPHHSRCP*IQDGSG
Trigger: GCCGCTGCCGTCCTGGATTCACGGGCACCTACTGTG...ATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTACTGCCACTCTCTCTGCTACTGGCAGGGCAGTaGCCAGTGGCATCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PVEATAAPGPMGLLPLSLLLAGQ*PVASLF
Trigger: GAAGAGAGATGCCACTGGGCACTGCCCTGCCAGTAG...CAGAGAGAGTGGCAGTAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp TTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTACCGCAGGTCGTCTCCTaGCGCGTGCCAAGCTTCGAT +
Preference number: 4 (lower is better)
Translates to: LETRMPVEATAAPGPMGLPQVVS*RVPSFD
Trigger: ATCGAAGCTTGGCACGCGCCAGGAGACGACCTGCGG...TAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CAA 72 bp GCCAGAGGGTGGTGGAAGCCGGGTAGACGGACATTCTaGCCCAAAGGGCCTAGACCAGAGAGCCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: ARGWWKPGRRTF*PKGPRPESQAC
Trigger: GCAGGCCTGGCTCTCTGGTCTAGGCCCTTTGGGCAAGAATGTCCGTCTACCCGGCTTCCACCACCCTCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTACTGCCACTCTCTCTGGTCCAGGTAGGCTCCTaGCTTATACCTCCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: PVEATAAPGPMGLLPLSLVQVGS*LIPPWQ
Trigger: TTGCCACGGAGGTATAAGGCAGGAGCCTACCTGGAC...CAGAGAGAGTGGCAGTAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp TTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTAGGACAGCGAAGGAGTTaGTGCCCAATACCGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LETRMPVEATAAPGPMGLGQRRS*CPIPAW
Trigger: CCACGCCGGTATTGGGCACCAACTCCTTCGCTGTCC...TAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp CCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTACTGCCACTCTCTCTGACAGCTAGGGAGCCCTaGATGGCGATCTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: PVEATAAPGPMGLLPLSLTAREP*MAILLM
Trigger: CATCAGCAAGATCGCCATCCAGGGCTCCCTAGCTGT...CAGAGAGAGTGGCAGTAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp GGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATAGGGCCAGAGGGTGGTaGAAGCCGGGTAGACGGACA +
Preference number: 4 (lower is better)
Translates to: GTFGNTDASGGHSSSGPHRARGW*KPGRRT
Trigger: TGTCCGTCTACCCGGCTTCCACCACCCTCTGGCCCT...ATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp TTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTATGCTGTCACACTCGCTaGGCTCCAGCTCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: LETRMPVEATAAPGPMGLCCHTR*APAHSP
Trigger: TGGACTGTGAGCTGGAGCTCAGCGAGTGTGACAGCA...TAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp CTGAAGGCCACTACTGGCAGGGCAGTGCCCAGTGGCATCTCTCTTCTCTTCTGTCCGGAAGGAGCCCCCTaGAGGCCACTACTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LKATTGRAVPSGISLLFCPEGAP*RPLLAG
Trigger: CCCTGCCAGTAGTGGCCTTCAGGGGGCTCCTTCCGG...ACAGAAGAGAAGAGAGATGCCACTGGGCACTGCCCTGCCAGTAGTGGCCTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp GCCAAAGGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGGGCGGCCGCAGCACCTaGTTTCCCCCTCAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: AKGTFGNTDASGGHSSSGGGRST*FPPQWN
Trigger: ATTCCACTGAGGGGGAAATCAGGTGCTGCGGCCGCC...CCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCCTTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp ACTCACCTCACCTCCAGGGCAAACCCCAGCAAGAGACGCACCCAGTGGTTTTCCAGTGCCGGTGTACGCTaGACCAAGGCGGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: THLTSRANPSKRRTQWFSSAGVR*TKAAGA
Trigger: AGCCCCAGCCGCCTTGGTGCAGCGTACACCGGCACT...GGAAAACCACTGGGTGCGTCTCTTGCTGGGGTTTGCCCTGGAGGTGAGGTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp AATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGATGTCCACCGGCCGCGCGCTGCTaGCAAAGTGCCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NVNNAEGRSSRGAEQGCPPAARC*QSATSS
Trigger: GCTGCTGGTGGCACTTTGGCAGCAGCGCGCGGCCGG...TGGACATCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CCTCATTGGCCCCCTCTCTCCTTTCTGATTTGGGCCCAACTGTCGCCGTGGAGCGACGGCAGCGGCACATaGGGCTTGGACCTCGGTTCA +
Preference number: 4 (lower is better)
Translates to: PHWPPLSFLIWAQLSPWSDGSGT*GLDLGS
Trigger: TGAACCGAGGTCCAAGCCGCATGTGCCGCTGCCGTC...GCTCCACGGCGACAGTTGGGCCCAAATCAGAAAGGAGAGAGGGGGCCAATGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp GGATGCAATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGATCCTGCAGCTGCAGCTaGAAGACGCCGGAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: GCNVNNAEGRSSRGAEQGSCSCS*KTPEPA
Trigger: GGCCGGCTCCGGCGTCTTCCAGCTGCAGCTGCAGGA...TCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATTGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp CTGGTGGGAGGGGCAGGCCCTCTGCCTGTCTGCTTACAGAAGCCCAGGGCCAGATTCGCTGCCCACTGTTaGAGCACGTTGCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: LVGGAGPLPVCLQKPRARFAAHC*STLPHS
Trigger: AGAATGGGGCAACGTGCTCCAACAGTGGGCAGCGAA...TCTGGCCCTGGGCTTCTGTAAGCAGACAGGCAGAGGGCCTGCCCCTCCCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp TTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTATGTCGCCGTGGAGCCTaGGCCAAAGGCACTTTTGGA +
Preference number: 4 (lower is better)
Translates to: LETRMPVEATAAPGPMGLCRRGA*AKGTFG
Trigger: TCCAAAAGTGCCTTTGGCCCAGGCTCCACGGCGACA...TAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp TTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTATCCAATAACCAGTTCTaGCCCACAGCTAGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LETRMPVEATAAPGPMGLSNNQF*PTAREP
Trigger: GGGCTCCCTAGCTGTGGGTCAGAACTGGTTATTGGA...TAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp TTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTAAGTAGCGCAGCCTTGTaGGGGTGCTGGTTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: LETRMPVEATAAPGPMGLSSAAL*GCWFAH
Trigger: ATGAGCAAACCAGCACCCTCACAAGGCTGCGCTACT...TAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp GGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATCAGCGAAGGAGTTGGTaGCCAATACCGGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GTFGNTDASGGHSSSGPHQRRSW*PIPAWR
Trigger: TCTCCACGCCGGTATTGGGCACCAACTCCTTCGCTG...ATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CCTCATTGGCCCCCTCTCTCCTTTCTGATTTGGGCCCAACTGTCGCCGTGGAGCGGCCGAAGTGGTCATTaGGCTTCTTGCACAGGCGGG +
Preference number: 4 (lower is better)
Translates to: PHWPPLSFLIWAQLSPWSGRSGH*ASCTGG
Trigger: CCCGCCTGTGCAAGAAGCGCAATGACCACTTCGGCC...GCTCCACGGCGACAGTTGGGCCCAAATCAGAAAGGAGAGAGGGGGCCAATGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTACTGCCACTCTCTCTGTCATCACAAGTACATTaGCAGGGAGTGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PVEATAAPGPMGLLPLSLSSQVH*QGVLQV
Trigger: CACCTGCAGCACTCCCTGGCAATGTACTTGTGATGA...CAGAGAGAGTGGCAGTAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp GCCAAAGGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGGGAACTCGCAGCGGCTaGCCACAAAGCCATAAGGGC +
Preference number: 4 (lower is better)
Translates to: AKGTFGNTDASGGHSSSGGTRSG*PQSHKG
Trigger: GCCCTTATGGCTTTGTGGGCAGCCGCTGCGAGTTCC...CCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCCTTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CTGGTGGGAGGGGCAGGCCCTCTGCCTGTCTGCTTACAGAAGCCCAGGGCCAGATGTTCCTCTGGTTGGTaGAGCTGCCAATCTGATGCC +
Preference number: 4 (lower is better)
Translates to: LVGGAGPLPVCLQKPRARCSSGW*SCQSDA
Trigger: GGCATCAGATTGGCAGCTGCACCAACCAGAGGAACA...TCTGGCCCTGGGCTTCTGTAAGCAGACAGGCAGAGGGCCTGCCCCTCCCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CCTCATTGGCCCCCTCTCTCCTTTCTGATTTGGGCCCAACTGTCGCCGTGGAGCGAGGGGCAGGCCCTCTaGCTGTCTGCTTACAGAAGC +
Preference number: 4 (lower is better)
Translates to: PHWPPLSFLIWAQLSPWSEGQAL*LSAYRS
Trigger: GCTTCTGTAAGCAGACAGGCAGAGGGCCTGCCCCTC...GCTCCACGGCGACAGTTGGGCCCAAATCAGAAAGGAGAGAGGGGGCCAATGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp GTCCGGTTCCTGCCATTCCCTCCTCCTCCTGAGAGCAGCACGTTGCATATGAAATGGGGCTGCGGCTCTTaGCCTCGTGTTCCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: VRFLPFPPPPESSTLHMKWGCGS*PRVPGL
Trigger: CAGGCCGGGAACACGAGGCCAAGAGCCGCAGCCCCA...TTTCATATGCAACGTGCTGCTCTCAGGAGGAGGAGGGAATGGCAGGAACCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp AATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGATGTCCACGCGGGCCCTCAATCTaGCTCTGTTCGCGACGCCGC +
Preference number: 4 (lower is better)
Translates to: NVNNAEGRSSRGAEQGCPRGPSI*LCSRRR
Trigger: GCGGCGTCGCGAACAGAGCCAGATTGAGGGCCCGCG...TGGACATCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp CTGAAGGCCACTACTGGCAGGGCAGTGCCCAGTGGCATCTCTCTTCTCTTCTGTGTGCTGCAGGTGCCGTaGCGACAGCCATTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LKATTGRAVPSGISLLFCVLQVP*RQPLWG
Trigger: CCCCCACAATGGCTGTCGCCACGGCACCTGCAGCAC...ACAGAAGAGAAGAGAGATGCCACTGGGCACTGCCCTGCCAGTAGTGGCCTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp ACTCACCTCACCTCCAGGGCAAACCCCAGCAAGAGACGCACCCAGTGGTTTTCCGCGGCACATGCGGCTTaGACCTCGGTTCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: THLTSRANPSKRRTQWFSAAHAA*TSVQAL
Trigger: CAGTGCCTGAACCGAGGTCCAAGCCGCATGTGCCGC...GGAAAACCACTGGGTGCGTCTCTTGCTGGGGTTTGCCCTGGAGGTGAGGTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp CTGGTGGGAGGGGCAGGCCCTCTGCCTGTCTGCTTACAGAAGCCCAGGGCCAGAACACAGACTGGTACATaGAGTCCCTGGGGGAGCATA +
Preference number: 4 (lower is better)
Translates to: LVGGAGPLPVCLQKPRARTQTGT*SPWGSI
Trigger: TATGCTCCCCCAGGGACTCCATGTACCAGTCTGTGT...TCTGGCCCTGGGCTTCTGTAAGCAGACAGGCAGAGGGCCTGCCCCTCCCACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp TTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTACTCTCCTTTCTGATTTaGGCCCAACTGTCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: LETRMPVEATAAPGPMGLLSFLI*AQLSPW
Trigger: CCACGGCGACAGTTGGGCCCAAATCAGAAAGGAGAG...TAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp CTGAAGGCCACTACTGGCAGGGCAGTGCCCAGTGGCATCTCTCTTCTCTTCTGTAGCAGGTGGCCCTGTTaGAGCAGGGACTCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LKATTGRAVPSGISLLFCSRWPC*SRDSRH
Trigger: GTGCCTCGAGTCCCTGCTTCAACAGGGCCACCTGCT...ACAGAAGAGAAGAGAGATGCCACTGGGCACTGCCCTGCCAGTAGTGGCCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp GGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGTGCAGCTGCCAATCTaGTGCCAGACAGACACCCAA +
Preference number: 4 (lower is better)
Translates to: GTFGNTDASGGHSSSGPHVQLPI*CQTDTQ
Trigger: TTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCAC...ATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTACTGCCACTCTCTCTGACTCTGCTGGCTTGCTaGAGTAGCCATTCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: PVEATAAPGPMGLLPLSLTLLAC*SSHSVH
Trigger: ATGAACAGAATGGCTACTGCAGCAAGCCAGCAGAGT...CAGAGAGAGTGGCAGTAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp TTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTAGGCACTCTGCTGGCTTaGTGCAGTAGCCATTCTGTT +
Preference number: 4 (lower is better)
Translates to: LETRMPVEATAAPGPMGLGTLLA*CSSHSV
Trigger: AACAGAATGGCTACTGCAGCAAGCCAGCAGAGTGCC...TAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp GGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATAGCCATTGTGGGGGATaGATTCGTTACACAGCCGGC +
Preference number: 4 (lower is better)
Translates to: GTFGNTDASGGHSSSGPHSHCGG*IRYTAG
Trigger: GCCGGCTGTGTAACGAATGCATCCCCCACAATGGCT...ATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp GGATGCAATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGAAGCCTGGGCGACAGGTaGAGGTGTAGCTTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: GCNVNNAEGRSSRGAEQGSLGDR*RCSFAA
Trigger: GGCAGCGAAGCTACACCTGCACCTGTCGCCCAGGCT...TCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATTGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CACCTCCAGGGCAAACCCCAGCAAGAGACGCACCCAGTGGTTTTCCAGCCCACACGGCGCAGCTCAAGGTaGTGTGTTCACAATGCAGGC +
Preference number: 4 (lower is better)
Translates to: HLQGKPQQETHPVVFQPTRRSSR*CVHNAG
Trigger: GCCTGCATTGTGAACACAGCACCTTGAGCTGCGCCG...TGTGGGCTGGAAAACCACTGGGTGCGTCTCTTGCTGGGGTTTGCCCTGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp AAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCCTGCCATTCCCAGTTGGCCCCCTGGTTaGGCTCCCGGCAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: KGIASLGKFTVCPVPAIPSWPPG*APGRSP
Trigger: GGGGCTCCTGCCGGGAGCGCAACCAGGGGGCCAACT...GGGAATGGCAGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CCTCATTGGCCCCCTCTCTCCTTTCTGATTTGGGCCCAACTGTCGCCGTGGAGCAGTCTGTCCGGTTCCTaGCATTCCCTCCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PHWPPLSFLIWAQLSPWSSLSGS*HSLLLL
Trigger: CAGGAGGAGGAGGGAATGGCAGGAACCGGACAGACT...GCTCCACGGCGACAGTTGGGCCCAAATCAGAAAGGAGAGAGGGGGCCAATGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTACTGCCACTCTCTCTGGGTGTGGAAGGGTATTaGATCTCTTGGCAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: PVEATAAPGPMGLLPLSLGVEGY*ISWQVH
Trigger: GTGAACTTGCCAAGAGATGCAATACCCTTCCACACC...CAGAGAGAGTGGCAGTAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp GTCCGGTTCCTGCCATTCCCTCCTCCTCCTGAGAGCAGCACGTTGCATATGAAACTTTGGCCTTCTCGCTaGCTCCGCTGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: VRFLPFPPPPESSTLHMKLWPSR*LRCSCR
Trigger: GCGGCAGCTGCAGCGGAGCCAGCGAGAAGGCCAAAG...TTTCATATGCAACGTGCTGCTCTCAGGAGGAGGAGGGAATGGCAGGAACCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp TTCTCTTCTGTTCCTCTGGTTGGTGCAGCTGCCAATCTGATGCCAGACAGACACCGCAAGGCCGCCCACTaGCCAGTACGCCGCGCTCGT +
Preference number: 4 (lower is better)
Translates to: FSSVPLVGAAANLMPDRHRKAAH*PVRRAR
Trigger: ACGAGCGCGGCGTACTGGCCAGTGGGCGGCCTTGCG...GTGTCTGTCTGGCATCAGATTGGCAGCTGCACCAACCAGAGGAACAGAAGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp GGATGCAATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGATGCCCAATACCGGCGTaGAGACGGTCCCGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: GCNVNNAEGRSSRGAEQGCPIPA*RRSRRC
Trigger: GCACCTTCGGGACCGTCTCCACGCCGGTATTGGGCA...TCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATTGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp GGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATTGCCCCATTCTTGCATaGGGAGTGGTGGGTGCAGTA +
Preference number: 4 (lower is better)
Translates to: GTFGNTDASGGHSSSGPHCPILA*GVVGAV
Trigger: TACTGCACCCACCACTCCCCATGCAAGAATGGGGCA...ATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp CTGAAGGCCACTACTGGCAGGGCAGTGCCCAGTGGCATCTCTCTTCTCTTCTGTCCGCCCCAGGGGCCCTaGGGCCAGATTATAGTCCAA +
Preference number: 4 (lower is better)
Translates to: LKATTGRAVPSGISLLFCPPQGP*GQIIVQ
Trigger: TTGGACTATAATCTGGCCCCAGGGCCCCTGGGGCGG...ACAGAAGAGAAGAGAGATGCCACTGGGCACTGCCCTGCCAGTAGTGGCCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp TTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTAGGCCAAAGGCACTTTTaGAAACACGGATGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LETRMPVEATAAPGPMGLGQRHF*KHGCQW
Trigger: CCACTGGCATCCGTGTTTCCAAAAGTGCCTTTGGCC...TAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp GCCAAAGGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGGCTTTGAGGGTGGTCTaGGGCAGTAGTGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: AKGTFGNTDASGGHSSSGALRVV*GSSGPE
Trigger: CTCTGGTCCACTACTGCCCCAGACCACCCTCAAAGC...CCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCCTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp AATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGATGTCCACTCCTCTCGGGACGCTaGTCCCCTTTGGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: NVNNAEGRSSRGAEQGCPLLSGR*SPLAFS
Trigger: CGAGAAGGCCAAAGGGGAGCAGCGTCCCGAGAGGAG...TGGACATCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp GGATGCAATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGAAGGGAGTGCTGCAGGTaGCGTGGCGACAGCCATTGT +
Preference number: 4 (lower is better)
Translates to: GCNVNNAEGRSSRGAEQGRECCR*RGDSHC
Trigger: ACAATGGCTGTCGCCACGGCACCTGCAGCACTCCCT...TCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATTGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp ACTCACCTCACCTCCAGGGCAAACCCCAGCAAGAGACGCACCCAGTGGTTTTCCCGTTGGCACAGGGGTTaGTGGTGCACCTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: THLTSRANPSKRRTQWFSRWHRG*WCTCPL
Trigger: AAGTGGACAGGTGCACCAGCAACCCCTGTGCCAACG...GGAAAACCACTGGGTGCGTCTCTTGCTGGGGTTTGCCCTGGAGGTGAGGTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp AATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGATGTCCATCATGGCTTCCCTGCTaGCGTCGTCCGGCCGTCGAA +
Preference number: 4 (lower is better)
Translates to: NVNNAEGRSSRGAEQGCPSWLPC*RRPAVE
Trigger: TTCGACGGCCGGACGACGGCAGCAGGGAAGCCATGA...TGGACATCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp CTGAAGGCCACTACTGGCAGGGCAGTGCCCAGTGGCATCTCTCTTCTCTTCTGTGGCGAGACGACCGCCTaGAAGTGCTTAAGGCAGACG +
Preference number: 4 (lower is better)
Translates to: LKATTGRAVPSGISLLFCGETTA*KCLRQT
Trigger: CGTCTGCCTTAAGCACTTCCAGGCGGTCGTCTCGCC...ACAGAAGAGAAGAGAGATGCCACTGGGCACTGCCCTGCCAGTAGTGGCCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp GGATGCAATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGAGCTGATGAGTGCATCTaGTGGCAAGGCCTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: GCNVNNAEGRSSRGAEQGADECI*WQGLWP
Trigger: CGGCCAGAGGCCTTGCCACCAGATGCACTCATCAGC...TCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATTGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp GCCAAAGGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGGCAGAGGCACTCTGCTaGCTTGCTGCAGTAGCCATT +
Preference number: 4 (lower is better)
Translates to: AKGTFGNTDASGGHSSSGAEALC*LAAVAI
Trigger: AATGGCTACTGCAGCAAGCCAGCAGAGTGCCTCTGC...CCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCCTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp GCCAAAGGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGATTCACAAGCATAGTTaGCCCCCTGGTTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: AKGTFGNTDASGGHSSSGIHKHS*PPGCAP
Trigger: GGGAGCGCAACCAGGGGGCCAACTATGCTTGTGAAT...CCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCCTTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp AATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGATGTCCATGGCAAGTGCCACCGTaGGCGCAAGGGTTACGGGCA +
Preference number: 4 (lower is better)
Translates to: NVNNAEGRSSRGAEQGCPWQVPP*AQGLRA
Trigger: TGCCCGTAACCCTTGCGCCCACGGTGGCACTTGCCA...TGGACATCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp CCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTACTGCCACTCTCTCTGAGACACCCAAAGGTGTaGAAGGGTATTGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: PVEATAAPGPMGLLPLSLRHPKV*KGIASL
Trigger: AAGAGATGCAATACCCTTCCACACCTTTGGGTGTCT...CAGAGAGAGTGGCAGTAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp CCTCATTGGCCCCCTCTCTCCTTTCTGATTTGGGCCCAACTGTCGCCGTGGAGCAGTTGTCACTGCAGATaGCCCGGTAAGAGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: PHWPPLSFLIWAQLSPWSSCHCR*PGKSSA
Trigger: TGCGCTACTCTTACCGGGTCATCTGCAGTGACAACT...GCTCCACGGCGACAGTTGGGCCCAAATCAGAAAGGAGAGAGGGGGCCAATGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp CTGAAGGCCACTACTGGCAGGGCAGTGCCCAGTGGCATCTCTCTTCTCTTCTGTCCCCTCTCTCCTTTCTaGTTTGGGCCCAACTGTCGC +
Preference number: 4 (lower is better)
Translates to: LKATTGRAVPSGISLLFCPLSPF*FGPNCR
Trigger: GCGACAGTTGGGCCCAAATCAGAAAGGAGAGAGGGG...ACAGAAGAGAAGAGAGATGCCACTGGGCACTGCCCTGCCAGTAGTGGCCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp GGATGCAATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGATCGTCTCCTGGCGCGTaGCAAGCTTCGATGATGAGC +
Preference number: 4 (lower is better)
Translates to: GCNVNNAEGRSSRGAEQGSSPGA*QASMMS
Trigger: GCTCATCATCGAAGCTTGGCACGCGCCAGGAGACGA...TCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATTGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp ACTCACCTCACCTCCAGGGCAAACCCCAGCAAGAGACGCACCCAGTGGTTTTCCGGTCATTGCGCTTCTTaGACAGGCGGGAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: THLTSRANPSKRRTQWFSGHCAS*TGGSSC
Trigger: ACAACTGCTCCCGCCTGTGCAAGAAGCGCAATGACC...GGAAAACCACTGGGTGCGTCTCTTGCTGGGGTTTGCCCTGGAGGTGAGGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp GGTGCAGCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTGCGGCAGAGGCACTCTaGTGGCTTGCTGCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: GAAANLMPDRHPKVWKGIAAEAL*WLAAVA
Trigger: GGCTACTGCAGCAAGCCAGCAGAGTGCCTCTGCCGC...AATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp GGTGCAGCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTCCAGGTCATGGCAAGTaGCACCGTGGGCGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: GAAANLMPDRHPKVWKGIPGHGK*HRGRKG
Trigger: ACCCTTGCGCCCACGGTGGCACTTGCCATGACCTGG...AATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp ACTCACCTCACCTCCAGGGCAAACCCCAGCAAGAGACGCACCCAGTGGTTTTCCGGACAAGTTGCCATCTaGCTGGCACACATAGTGGCC +
Preference number: 4 (lower is better)
Translates to: THLTSRANPSKRRTQWFSGQVAI*LAHIVA
Trigger: GGCCACTATGTGTGCCAGCCAGATGGCAACTTGTCC...GGAAAACCACTGGGTGCGTCTCTTGCTGGGGTTTGCCCTGGAGGTGAGGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp GGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATTCTCTTCTGTTCCTCTaGTTGGTGCAGCTGCCAATC +
Preference number: 4 (lower is better)
Translates to: GTFGNTDASGGHSSSGPHSLLFL*LVQLPI
Trigger: GATTGGCAGCTGCACCAACCAGAGGAACAGAAGAGA...ATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp GGATGCAATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGAGGGGGAGCATATCGCTaGTATCCGACACTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GCNVNNAEGRSSRGAEQGGGAYR*YPTLWL
Trigger: AAGCCAGAGTGTCGGATATCAGCGATATGCTCCCCC...TCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATTGCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp ACTCACCTCACCTCCAGGGCAAACCCCAGCAAGAGACGCACCCAGTGGTTTTCCTCGTTGATGAACTCCTaGAGCTGCAGCTGGAAGACG +
Preference number: 4 (lower is better)
Translates to: THLTSRANPSKRRTQWFSSLMNS*SCSWKT
Trigger: CGTCTTCCAGCTGCAGCTGCAGGAGTTCATCAACGA...GGAAAACCACTGGGTGCGTCTCTTGCTGGGGTTTGCCCTGGAGGTGAGGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp GGTGCAGCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTTACATTGCCAGGGAGTaGTGCAGGTGCCGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: GAAANLMPDRHPKVWKGIYIARE*CRCRGD
Trigger: GTCGCCACGGCACCTGCAGCACTCCCTGGCAATGTA...AATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp TTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTATGTGGTTTTGCTGTTTaGCACAGTTGGACTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LETRMPVEATAAPGPMGLCGFAV*HSWTCP
Trigger: TGGACAAGTCCAACTGTGGCAAACAGCAAAACCACA...TAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp AAGGTGTGGAAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCCTTGGTGGCAAGGCCTCTaGCCGCAGGTCGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KVWKGIASLGKFTVCPVPWWQGL*PQVVSW
Trigger: CCAGGAGACGACCTGCGGCCAGAGGCCTTGCCACCA...AGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp GGTGCAGCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTGATGAGTGCATCTGGTaGCAAGGCCTCTGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GAAANLMPDRHPKVWKGIDECIW*QGLWPQ
Trigger: CTGCGGCCAGAGGCCTTGCCACCAGATGCACTCATC...AATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp AATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGATGTCCAAGGCACAGGCATCGATaGATGTCCGCACCTCACAGC +
Preference number: 4 (lower is better)
Translates to: NVNNAEGRSSRGAEQGCPRHRHR*MSAPHS
Trigger: GCTGTGAGGTGCGGACATCCATCGATGCCTGTGCCT...TGGACATCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp GGTGCAGCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTTACGGGCACAGTCGCTaGCGTGGAGTTCACAGTAGG +
Preference number: 4 (lower is better)
Translates to: GAAANLMPDRHPKVWKGIYGHSR*RGVHSR
Trigger: CCTACTGTGAACTCCACGTCAGCGACTGTGCCCGTA...AATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp GGATGCAATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGATCTGGTTGGTGCAGCTaGCAATCTGATGCCAGACAG +
Preference number: 4 (lower is better)
Translates to: GCNVNNAEGRSSRGAEQGSGWCS*QSDARQ
Trigger: CTGTCTGGCATCAGATTGGCAGCTGCACCAACCAGA...TCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATTGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp GGATGCAATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGATTTTGGAAACACGGATaGCAGTGGAGGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: GCNVNNAEGRSSRGAEQGFWKHG*QWRPQQ
Trigger: CTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAA...TCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATTGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp AAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCCTGCCATTCCCCCATTCTCCAGGTCATaGCAAGTGCCACCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: KGIASLGKFTVCPVPAIPPFSRS*QVPPWA
Trigger: CGCCCACGGTGGCACTTGCCATGACCTGGAGAATGG...GGGAATGGCAGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp GGATGCAATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGAGCTGTTTGCCACAGTTaGACTTGTCCAGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: GCNVNNAEGRSSRGAEQGAVCHS*TCPGHS
Trigger: ACTGTGGCCTGGACAAGTCCAACTGTGGCAAACAGC...TCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATTGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp ACTCACCTCACCTCCAGGGCAAACCCCAGCAAGAGACGCACCCAGTGGTTTTCCATCAAACACACAGACTaGTACATGGAGTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: THLTSRANPSKRRTQWFSIKHTD*YMESLG
Trigger: CCCCAGGGACTCCATGTACCAGTCTGTGTGTTTGAT...GGAAAACCACTGGGTGCGTCTCTTGCTGGGGTTTGCCCTGGAGGTGAGGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp AAGGTGTGGAAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCCTCCTGAAGGCCACTACTaGCAGGGCAGTGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: KVWKGIASLGKFTVCPVPPEGHY*QGSAQW
Trigger: CCACTGGGCACTGCCCTGCCAGTAGTGGCCTTCAGG...AGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp AAGGTGTGGAAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCCTTCCAACACACTGCCCTaGGTGCCCCAGTTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: KVWKGIASLGKFTVCPVPSNTLP*VPQLGL
Trigger: CAGGCCTAACTGGGGCACTCAGGGCAGTGTGTTGGA...AGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp GGTGCAGCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTTCTGAAGACCAGCTTTaGGGGTGGTCTGGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: GAAANLMPDRHPKVWKGISEDQL*GWSGAV
Trigger: TACTGCCCCAGACCACCCTCAAAGCTGGTCTTCAGA...AATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp GTCCGGTTCCTGCCATTCCCTCCTCCTCCTGAGAGCAGCACGTTGCATATGAAAGATCTTGCTGATGAGTaGATCTGGTGGCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: VRFLPFPPPPESSTLHMKDLADE*IWWQGL
Trigger: GAGGCCTTGCCACCAGATGCACTCATCAGCAAGATC...TTTCATATGCAACGTGCTGCTCTCAGGAGGAGGAGGGAATGGCAGGAACCGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp AATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGATGTCCAACTGTTGGAGCACGTTaGCCCATTCTTGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: NVNNAEGRSSRGAEQGCPTVGAR*PILAWG
Trigger: TCCCCATGCAAGAATGGGGCAACGTGCTCCAACAGT...TGGACATCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp AGCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTGCATCCCTGGTCCTTACAGCTaGCTCCATTGCGACAGGGGT +
Preference number: 4 (lower is better)
Translates to: SCQSDARQTPKGVEGYCIPGPYS*LHCDRG
Trigger: ACCCCTGTCGCAATGGAGGCAGCTGTAAGGACCAGG...GATGCAATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp CACCTCCAGGGCAAACCCCAGCAAGAGACGCACCCAGTGGTTTTCCAGCCCACATCCAATGTGTGGTTTTaGTGTTTGCCACAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: HLQGKPQQETHPVVFQPTSNVWF*CLPQLD
Trigger: GTCCAACTGTGGCAAACAGCAAAACCACACATTGGA...TGTGGGCTGGAAAACCACTGGGTGCGTCTCTTGCTGGGGTTTGCCCTGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp GCCAAAGGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGTTTGTGTTTTTAAGCTaGGCGGCAGGAATCAGGTTG +
Preference number: 4 (lower is better)
Translates to: AKGTFGNTDASGGHSSSGFVFLS*AAGIRL
Trigger: CAACCTGATTCCTGCCGCCCAGCTTAAAAACACAAA...CCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCCTTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp GTCCGGTTCCTGCCATTCCCTCCTCCTCCTGAGAGCAGCACGTTGCATATGAAAGGTACATGGAGTCCCTaGGGGAGCATATCGCTGATA +
Preference number: 4 (lower is better)
Translates to: VRFLPFPPPPESSTLHMKGTWSP*GSISLI
Trigger: TATCAGCGATATGCTCCCCCAGGGACTCCATGTACC...TTTCATATGCAACGTGCTGCTCTCAGGAGGAGGAGGGAATGGCAGGAACCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp GGTGCAGCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTCAGGGCAGTGCCCAGTaGCATCTCTCTTCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GAAANLMPDRHPKVWKGIQGSAQ*HLSSLL
Trigger: CAGAAGAGAAGAGAGATGCCACTGGGCACTGCCCTG...AATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp AAGGTGTGGAAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCCTCAGGGCAGGTGCACATaGGCCCATTCTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: KVWKGIASLGKFTVCPVPQGRCT*AHSPGH
Trigger: ATGACCTGGAGAATGGGCTCATGTGCACCTGCCCTG...AGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp AAGGTGTGGAAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCCTACGTTGCCCCATTCTTaGATGGGGAGTGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: KVWKGIASLGKFTVCPVPTLPHS*MGSGGC
Trigger: GCACCCACCACTCCCCATGCAAGAATGGGGCAACGT...AGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp AGTGGCATCTCTCTTCTCTTCTGTTCCTCTGGTTGGTGCAGCTGCCAATCTGATTACTGCCACTCTCTCTaGAAAACAGGCCGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SGISLLFCSSGWCSCQSDYCHSL*KTGRSP
Trigger: GGGGCTCCGGCCTGTTTTCCAGAGAGAGTGGCAGTA...ATCAGATTGGCAGCTGCACCAACCAGAGGAACAGAAGAGAAGAGAGATGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp CCCAAAGGTGTGGAAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTAAGAGACGCACCCAGTaGTTTTCCAGCCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: PKGVEGYCISWQVHSLSGKRRTQ*FSSPQE
Trigger: CTCCTGTGGGCTGGAAAACCACTGGGTGCGTCTCTT...ACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp GGTGCAGCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTAGCCATAAGGGCAGTTaGACACAAAGGTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: GAAANLMPDRHPKVWKGISHKGS*TQRCLW
Trigger: CCACAGACACCTTTGTGTGCAACTGCCCTTATGGCT...AATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp AAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCCTGCCATTCCCTGGCGACAGCCATTGTaGGGGATGCATTCGTTACAC +
Preference number: 4 (lower is better)
Translates to: KGIASLGKFTVCPVPAIPWRQPL*GMHSLH
Trigger: GTGTAACGAATGCATCCCCCACAATGGCTGTCGCCA...GGGAATGGCAGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp AGTGGCATCTCTCTTCTCTTCTGTTCCTCTGGTTGGTGCAGCTGCCAATCTGATTGGCACAGGGGTTGCTaGTGCACCTGTCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: SGISLLFCSSGWCSCQSDWHRGC*CTCPLS
Trigger: AGAAAGTGGACAGGTGCACCAGCAACCCCTGTGCCA...ATCAGATTGGCAGCTGCACCAACCAGAGGAACAGAAGAGAAGAGAGATGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp AGCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTGCATCACACAAAGGTGTCTGTaGAGAGGTCGGTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: SCQSDARQTPKGVEGYCITQRCL*RGRCSR
Trigger: CCTGCTACACCGACCTCTCCACAGACACCTTTGTGT...GATGCAATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp AATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGATGTCCATTCTGTTCCTCTGGTTaGTGCAGCTGCCAATCTGAT +
Preference number: 4 (lower is better)
Translates to: NVNNAEGRSSRGAEQGCPFCSSG*CSCQSD
Trigger: ATCAGATTGGCAGCTGCACCAACCAGAGGAACAGAA...TGGACATCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp TTCTCTTCTGTTCCTCTGGTTGGTGCAGCTGCCAATCTGATGCCAGACAGACACCCTGCATACAGTAGTTaGAGGCATGGGGCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: FSSVPLVGAAANLMPDRHPAYSS*RHGAES
Trigger: GCTTTCTGCCCCATGCCTCCAACTACTGTATGCAGG...GTGTCTGTCTGGCATCAGATTGGCAGCTGCACCAACCAGAGGAACAGAAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp AGTGGCATCTCTCTTCTCTTCTGTTCCTCTGGTTGGTGCAGCTGCCAATCTGATGTAGACGGACATTCTTaGCCAAAGGGCCTAGACCAG +
Preference number: 4 (lower is better)
Translates to: SGISLLFCSSGWCSCQSDVDGHS*PKGLDQ
Trigger: CTGGTCTAGGCCCTTTGGGCAAGAATGTCCGTCTAC...ATCAGATTGGCAGCTGCACCAACCAGAGGAACAGAAGAGAAGAGAGATGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp CTGAAGGCCACTACTGGCAGGGCAGTGCCCAGTGGCATCTCTCTTCTCTTCTGTTCCAGCTCCTTCTTCTaGTTTGTGTTTTTAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LKATTGRAVPSGISLLFCSSSFF*FVFLSW
Trigger: CCAGCTTAAAAACACAAACCAGAAGAAGGAGCTGGA...ACAGAAGAGAAGAGAGATGCCACTGGGCACTGCCCTGCCAGTAGTGGCCTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp GGTGCAGCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTGGGTATTGCATCTCTTaGCAAGTTCACAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: GAAANLMPDRHPKVWKGIGYCIS*QVHSLS
Trigger: GGACAGACTGTGAACTTGCCAAGAGATGCAATACCC...AATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
3UTR CAA 72 bp ACAGACACCCAAAGGTGTGGAAGGGTATTGCATCTCTaGGCAAGTTCACAGTCTGTCCGGTTCCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: TDTQRCGRVLHL*ASSQSVRFLPF
Trigger: GAATGGCAGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTTTGGGTGTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp CCCAAAGGTGTGGAAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTATACCTCCGTGGCAATaGCACATTCATTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PKGVEGYCISWQVHSLSGIPPWQ*HIHSSP
Trigger: AGGAGAGGAATGAATGTGTCATTGCCACGGAGGTAT...ACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp AAGGTGTGGAAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCCTGCAGCACGTTGCATATaGAAAACGTCCCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: KVWKGIASLGKFTVCPVPAARCI*KTSHPG
Trigger: TCCTGGATGGGACGTTTTTCATATGCAACGTGCTGC...AGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR TCA 90 bp CTGAAGGCCACTACTGGCAGGGCAGTGCCCAGTGGCATCTCTCTTCTCTTCTGTCATATTATTGATTTCTaGAGACCAGCTTTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LKATTGRAVPSGISLLFCHIIDF*RPALRV
Trigger: CACCCTCAAAGCTGGTCTTCAGAAATCAATAATATG...ACAGAAGAGAAGAGAGATGCCACTGGGCACTGCCCTGCCAGTAGTGGCCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR GCA 90 bp AGCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTGCATCATGCAATGTAAACAATaGAGAAGGAAGGTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: SCQSDARQTPKGVEGYCIMQCKQ*RRKVQP
Trigger: CGGCTGGACCTTCCTTCTGCATTGTTTACATTGCAT...GATGCAATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp AGCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTGCATCAGACAGATAGGCTGTTaGCAATATTCCCCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: SCQSDARQTPKGVEGYCIRQIGC*QYSPVQ
Trigger: TTGGACTGGGGAATATTGCCAACAGCCTATCTGTCT...GATGCAATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CCA 90 bp AAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCCTGCCATTCCCATCAGGTTGTCCTTCTaGAAGTCCGACAAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: KGIASLGKFTVCPVPAIPIRLSF*KSDKLF
Trigger: GAACAACTTGTCGGACTTCCAGAAGGACAACCTGAT...GGGAATGGCAGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS TCA 90 bp TTCGCGACGCCGCTTTCCCGCGCGTCCGCCAGCCGGCGGGGTCCCTaGAAAGAGGCGCTCCTCTCGGGACGCTGCTCCCCTTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: FATPLSRASASRRGP*KEALLSGRCSPLAF
Trigger: GAAGGCCAAAGGGGAGCAGCGTCCCGAGAGGAGCGCCTCTTTTCAGGGACCCCGCCGGCTGGCGGACGCGCGGGAAAGCGGCGTCGCGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000557876.1
CDS-3UTR CAA 90 bp CCGGAGCCCCGGAAGGAGCCCCCTGAAGGCCACTACTGGCAGGGCAGTGCCCAGAGGCACTGTCCCCCGTaGGCACAGGGGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: PEPRKEPPEGHYWQGSAQRHCPP*AQGLLV
Trigger: CACCAGCAACCCCTGTGCCAACGGGGGACAGTGCCT...CTGGGCACTGCCCTGCCAGTAGTGGCCTTCAGGGGGCTCCTTCCGGGGCTCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp CCGGAGCCCCGGAAGGAGCCCCCTGAAGGCCACTACTGGCAGGGCAGTGCCCAGCCGTTGGCACAGGGGTaGCTGGTGCACCTGTCCACT +
Preference number: 5 (lower is better)
Translates to: PEPRKEPPEGHYWQGSAQPLAQG*LVHLST
Trigger: AGTGGACAGGTGCACCAGCAACCCCTGTGCCAACGG...CTGGGCACTGCCCTGCCAGTAGTGGCCTTCAGGGGGCTCCTTCCGGGGCTCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CCA 90 bp GGCTCCGCTGCAGCTGCCGCTGTAGGTAATCCAGGTGACTACGGCTaGGCGGCGACCGCGCCGAGGACGCGTCTTCTGTCTAATCCTGGG +
Preference number: 5 (lower is better)
Translates to: GSAAAAAVGNPGDYG*AATAPRTRLLSNPG
Trigger: CCCAGGATTAGACAGAAGACGCGTCCTCGGCGCGGTCGCCGCCCAGCCGTAGTCACCTGGATTACCTACAGCGGCAGCTGCAGCGGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000557876.1
CDS CCA 90 bp TACTGTCGTCCCGGACAGCGAAGGAGTTGGTGCCCAATACCGGCGTaGAGACGGTCCCGAAGGTGCAGGGTCCGGGCGAGACGACCGCCT +
Preference number: 5 (lower is better)
Translates to: YCRPGQRRSWCPIPA*RRSRRCRVRARRPP
Trigger: AGGCGGTCGTCTCGCCCGGACCCTGCACCTTCGGGACCGTCTCCACGCCGGTATTGGGCACCAACTCCTTCGCTGTCCGGGACGACAGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000557876.1
CDS-3UTR CAA 90 bp GGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATCTGGGGCTGCGGCTCTaGGCCTCGTGTTCCCGGCCT +
Preference number: 5 (lower is better)
Translates to: GTFGNTDASGGHSSSGPHLGLRL*ASCSRP
Trigger: AGGCCGGGAACACGAGGCCAAGAGCCGCAGCCCCAG...ATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS GCA 90 bp GGCGGAGCGAGCTACTCACCTGGCCGCAGGTCGTCTCCTGGCGCGTaGCAAGCTTCGATGATGAGCGAGAAGGTACCCTGGGAAAGGGGG +
Preference number: 5 (lower is better)
Translates to: GGASYSPGRRSSPGA*QASMMSEKVPWERG
Trigger: CCCCCTTTCCCAGGGTACCTTCTCGCTCATCATCGAAGCTTGGCACGCGCCAGGAGACGACCTGCGGCCAGGTGAGTAGCTCGCTCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557876.1
CDS GCA 90 bp CCCAGGGGAAGCTGGGCGGCAAGCCCACGGGGAACTCGCAGCGGCTaGCCACAAAGCCATAAGGGCAGTTGCACACAAAGGTGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: PRGSWAASPRGTRSG*PQSHKGSCTQRCLW
Trigger: CCACAGACACCTTTGTGTGCAACTGCCCTTATGGCTTTGTGGGCAGCCGCTGCGAGTTCCCCGTGGGCTTGCCGCCCAGCTTCCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CCA 90 bp ACAGTAGGTGCCCGTGAATCCAGGACGGCAGCGGCACATGCGGCTTaGACCTCGGTTCAGGCACTGTCCCCCGTTGGCACAGGGGTTGCT +
Preference number: 5 (lower is better)
Translates to: TVGARESRTAAAHAA*TSVQALSPVGTGVA
Trigger: AGCAACCCCTGTGCCAACGGGGGACAGTGCCTGAACCGAGGTCCAAGCCGCATGTGCCGCTGCCGTCCTGGATTCACGGGCACCTACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp CCTCATTGGCCCCCTCTCTCCTTTCTGATTTGGGCCCAACTGTCGCCGTGGAGCGGACGCTGCTCCCCTTaGGCCTTCTCGCTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: PHWPPLSFLIWAQLSPWSGRCSP*AFSLAP
Trigger: CGGAGCCAGCGAGAAGGCCAAAGGGGAGCAGCGTCC...GCTCCACGGCGACAGTTGGGCCCAAATCAGAAAGGAGAGAGGGGGCCAATGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp CTGGTGGGAGGGGCAGGCCCTCTGCCTGTCTGCTTACAGAAGCCCAGGGCCAGAAGTACGCCGCGCTCGTaGATGAACTCCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LVGGAGPLPVCLQKPRARSTPRS*MNSCSC
Trigger: GCAGCTGCAGGAGTTCATCAACGAGCGCGGCGTACT...TCTGGCCCTGGGCTTCTGTAAGCAGACAGGCAGAGGGCCTGCCCCTCCCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp CTGGTGGGAGGGGCAGGCCCTCTGCCTGTCTGCTTACAGAAGCCCAGGGCCAGACTTCGCTGCCCACTGTaGGAGCACGTTGCCCCATTC +
Preference number: 5 (lower is better)
Translates to: LVGGAGPLPVCLQKPRARLRCPL*EHVAPF
Trigger: GAATGGGGCAACGTGCTCCAACAGTGGGCAGCGAAG...TCTGGCCCTGGGCTTCTGTAAGCAGACAGGCAGAGGGCCTGCCCCTCCCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS GCA 90 bp GCATCTGGTGGCAAGGCCTCTGGCCGCAGGTCGTCTCCTGGCGCGTaGCAAGCTTCGATGATGAGCGAGAAGGTACCCGGCCAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: ASGGKASGRRSSPGA*QASMMSEKVPGQVK
Trigger: TTTCACCTGGCCGGGTACCTTCTCGCTCATCATCGAAGCTTGGCACGCGCCAGGAGACGACCTGCGGCCAGAGGCCTTGCCACCAGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS GCA 90 bp GGTTGTCCTTCTGGAAGTCCGACAAGTTGTTCATGGCTTCCCTGCTaGCGTCGTCCGGCCGTCGAAGCCGCAGCTGCCGCACAGCCACTG +
Preference number: 5 (lower is better)
Translates to: GCPSGSPTSCSWLPC*RRPAVEAAAAAQPL
Trigger: CAGTGGCTGTGCGGCAGCTGCGGCTTCGACGGCCGGACGACGGCAGCAGGGAAGCCATGAACAACTTGTCGGACTTCCAGAAGGACAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS GCA 90 bp TCAGGTTGTCCTTCTGGAAGTCCGACAAGTTGTTCATGGCTTCCCTaGTGCCGTCGTCCGGCCGTCGAAGCCGCAGCTGCCGCACAGCCA +
Preference number: 5 (lower is better)
Translates to: SGCPSGSPTSCSWLP*CRRPAVEAAAAAQP
Trigger: TGGCTGTGCGGCAGCTGCGGCTTCGACGGCCGGACGACGGCAGCAGGGAAGCCATGAACAACTTGTCGGACTTCCAGAAGGACAACCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CCA 90 bp CGGCAGGAATCAGGTTGTCCTTCTGGAAGTCCGACAAGTTGTTCATaGCTTCCCTGCTGCCGTCGTCCGGCCGTCGAAGCCGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: RQESGCPSGSPTSCS*LPCCRRPAVEAAAA
Trigger: GGCAGCTGCGGCTTCGACGGCCGGACGACGGCAGCAGGGAAGCCATGAACAACTTGTCGGACTTCCAGAAGGACAACCTGATTCCTGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS TCA 90 bp AGAGGGTCGGGTCAGGGAAGGGTCGCCAGTCCCCAAGGGTGCCAGTaGCGGCTGGCCAATGTCCTTCTTGGCTGTGATGATGGTGATCAG +
Preference number: 5 (lower is better)
Translates to: RGSGQGRVASPQGCQ*RLANVLLGCDDGDQ
Trigger: CTGATCACCATCATCACAGCCAAGAAGGACATTGGCCAGCCGTCACTGGCACCCTTGGGGACTGGCGACCCTTCCCTGACCCGACCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559440.1
CDS CCA 90 bp CAGCCCTCATCACAAGTACATTGCCAGGGAGTGCTGCAGGTGCCGTaGCGACAGCCATTGTGGGGGATGCATTCGTTACACAGCCGGCCC +
Preference number: 5 (lower is better)
Translates to: QPSSQVHCQGVLQVP*RQPLWGMHSLHSRP
Trigger: GGGCCGGCTGTGTAACGAATGCATCCCCCACAATGGCTGTCGCCACGGCACCTGCAGCACTCCCTGGCAATGTACTTGTGATGAGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000559440.1
CDS CCA 90 bp CGGGTCAGGGAAGGGTCGCCAGTCCCCAAGGGTGCCAGTGACGGCTaGCCAATGTCCTTCTTGGCTGTGATGATGGTGATCAGCCAACCA +
Preference number: 5 (lower is better)
Translates to: RVREGSPVPKGASDG*PMSFLAVMMVISQP
Trigger: TGGTTGGCTGATCACCATCATCACAGCCAAGAAGGACATTGGCCAGCCGTCACTGGCACCCTTGGGGACTGGCGACCCTTCCCTGACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559440.1
CDS-3UTR CAA 90 bp TTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTATTGCCACAGTTGGACTaGTCCAGGCCACAGTCCACT +
Preference number: 5 (lower is better)
Translates to: LETRMPVEATAAPGPMGLLPQLD*SRPQST
Trigger: AGTGGACTGTGGCCTGGACAAGTCCAACTGTGGCAA...TAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS GCA 90 bp ACAGGCCTCCCCAGCCCTCATCACAAGTACATTGCCAGGGAGTGCTaGAGGTGCCGTGGCGACAGCCATTGTGGGGGATGCATTCGTTAC +
Preference number: 5 (lower is better)
Translates to: TGLPSPHHKYIAREC*RCRGDSHCGGCIRY
Trigger: GTAACGAATGCATCCCCCACAATGGCTGTCGCCACGGCACCTGCAGCACTCCCTGGCAATGTACTTGTGATGAGGGCTGGGGAGGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000559440.1
CDS GCA 90 bp TCTTGGTCACAAAACAGGCCTCCCCAGCCCTCATCACAAGTACATTaGCAGGGAGTGCTGCAGGTGCCGTGGCGACAGCCATTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: SWSQNRPPQPSSQVH*QGVLQVPWRQPLWG
Trigger: CCCCCACAATGGCTGTCGCCACGGCACCTGCAGCACTCCCTGGCAATGTACTTGTGATGAGGGCTGGGGAGGCCTGTTTTGTGACCAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000559440.1
CDS-3UTR CAA 90 bp CCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTACTGCCACTCTCTCTGAAGACAGATAGGCTGTaGGCAATATTCCCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: PVEATAAPGPMGLLPLSLKTDRL*AIFPSP
Trigger: TGGACTGGGGAATATTGCCAACAGCCTATCTGTCTT...CAGAGAGAGTGGCAGTAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp GTCCGGTTCCTGCCATTCCCTCCTCCTCCTGAGAGCAGCACGTTGCATATGAAACGGACAGCGAAGGAGTaGGTGCCCAATACCGGCGTG +
Preference number: 5 (lower is better)
Translates to: VRFLPFPPPPESSTLHMKRTAKE*VPNTGV
Trigger: CACGCCGGTATTGGGCACCAACTCCTTCGCTGTCCG...TTTCATATGCAACGTGCTGCTCTCAGGAGGAGGAGGGAATGGCAGGAACCGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp ACTCACCTCACCTCCAGGGCAAACCCCAGCAAGAGACGCACCCAGTGGTTTTCCCCGTGGCGACAGCCATaGTGGGGGATGCATTCGTTA +
Preference number: 5 (lower is better)
Translates to: THLTSRANPSKRRTQWFSPWRQP*WGMHSL
Trigger: TAACGAATGCATCCCCCACAATGGCTGTCGCCACGG...GGAAAACCACTGGGTGCGTCTCTTGCTGGGGTTTGCCCTGGAGGTGAGGTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp AGTGGCATCTCTCTTCTCTTCTGTTCCTCTGGTTGGTGCAGCTGCCAATCTGATCGGCAGGAGCCCCCATaGAAGCAGGGGGAGTCGGCG +
Preference number: 5 (lower is better)
Translates to: SGISLLFCSSGWCSCQSDRQEPP*KQGESA
Trigger: CGCCGACTCCCCCTGCTTCAATGGGGGCTCCTGCCG...ATCAGATTGGCAGCTGCACCAACCAGAGGAACAGAAGAGAAGAGAGATGCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp AATGTAAACAATGCAGAAGGAAGGTCCAGCCGCGGGGCTGAGCAGGGATGTCCACCATTGCGACAGGGGTaGCTGTCACACTCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: NVNNAEGRSSRGAEQGCPPLRQG*LSHSLS
Trigger: GCTCAGCGAGTGTGACAGCAACCCCTGTCGCAATGG...TGGACATCCCTGCTCAGCCCCGCGGCTGGACCTTCCTTCTGCATTGTTTACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp CTGAAGGCCACTACTGGCAGGGCAGTGCCCAGTGGCATCTCTCTTCTCTTCTGTGCGGCAGGAATCAGGTaGTCCTTCTGGAAGTCCGAC +
Preference number: 5 (lower is better)
Translates to: LKATTGRAVPSGISLLFCAAGIR*SFWKSD
Trigger: GTCGGACTTCCAGAAGGACAACCTGATTCCTGCCGC...ACAGAAGAGAAGAGAGATGCCACTGGGCACTGCCCTGCCAGTAGTGGCCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp GGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGTGTGGTTTTGCTGTTaGCCACAGTTGGACTTGTCC +
Preference number: 5 (lower is better)
Translates to: GTFGNTDASGGHSSSGPHVWFCC*PQLDLS
Trigger: GGACAAGTCCAACTGTGGCAAACAGCAAAACCACAC...ATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp TTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGGGGCTAAGGGTATTGCATCTCTaGGCAAGTTCACAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: LETRMPVEATAAPGPMGLRVLHL*ASSQSV
Trigger: GACAGACTGTGAACTTGCCAAGAGATGCAATACCCT...TAGCCCCATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CCA 90 bp GCAATATTCCCCAGTCCAACCGGGCAGGCAGGACAAGTTGCCATCTaGCTGGCACACATAGTGGCCGAAGTGGTCATTGCGCTTCTTGCA +
Preference number: 5 (lower is better)
Translates to: AIFPSPTGQAGQVAI*LAHIVAEVVIALLA
Trigger: TGCAAGAAGCGCAATGACCACTTCGGCCACTATGTGTGCCAGCCAGATGGCAACTTGTCCTGCCTGCCCGGTTGGACTGGGGAATATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000559440.1
CDS-3UTR CAA 90 bp GGTGCAGCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTGGCAGGCAGGACAAGTaGCCATCTGGCTGGCACACA +
Preference number: 5 (lower is better)
Translates to: GAAANLMPDRHPKVWKGIGRQDK*PSGWHT
Trigger: TGTGTGCCAGCCAGATGGCAACTTGTCCTGCCTGCC...AATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp CCCAAAGGTGTGGAAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTAGCGGCACATGCGGCTaGGACCTCGGTTCAGGCACT +
Preference number: 5 (lower is better)
Translates to: PKGVEGYCISWQVHSLSGSGTCG*DLGSGT
Trigger: AGTGCCTGAACCGAGGTCCAAGCCGCATGTGCCGCT...ACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp CTGAAGGCCACTACTGGCAGGGCAGTGCCCAGTGGCATCTCTCTTCTCTTCTGTTGCTGTTTGCCACAGTaGGACTTGTCCAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: LKATTGRAVPSGISLLFCCCLPQ*DLSRPQ
Trigger: CTGTGGCCTGGACAAGTCCAACTGTGGCAAACAGCA...ACAGAAGAGAAGAGAGATGCCACTGGGCACTGCCCTGCCAGTAGTGGCCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp GGCACTTTTGGAAACACGGATGCCAGTGGAGGCCACAGCAGCTCCGGGCCCCATGTCCAATGTGTGGTTTaGCTGTTTGCCACAGTTGGA +
Preference number: 5 (lower is better)
Translates to: GTFGNTDASGGHSSSGPHVQCVV*LFATVG
Trigger: TCCAACTGTGGCAAACAGCAAAACCACACATTGGAC...ATGGGGCCCGGAGCTGCTGTGGCCTCCACTGGCATCCGTGTTTCCAAAAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp CTGAAGGCCACTACTGGCAGGGCAGTGCCCAGTGGCATCTCTCTTCTCTTCTGTGGTAGACGGACATTCTaGCCCAAAGGGCCTAGACCA +
Preference number: 5 (lower is better)
Translates to: LKATTGRAVPSGISLLFCGRRTF*PKGPRP
Trigger: TGGTCTAGGCCCTTTGGGCAAGAATGTCCGTCTACC...ACAGAAGAGAAGAGAGATGCCACTGGGCACTGCCCTGCCAGTAGTGGCCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS TCA 90 bp CGCAGCCTTGTGAGGGTGCTGGTTTGCTCATCCAATAACCAGTTCTaGCCCACAGCTAGGGAGCCCTGGATGGCGATCTTGCTGATGAGT +
Preference number: 5 (lower is better)
Translates to: RSLVRVLVCSSNNQF*PTAREPWMAILLMS
Trigger: ACTCATCAGCAAGATCGCCATCCAGGGCTCCCTAGCTGTGGGTCAGAACTGGTTATTGGATGAGCAAACCAGCACCCTCACAAGGCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000559440.1
CDS TCA 90 bp AAGAGCTGGGGACGGGAGGACATAAACTGGGAAGACGGAGACTGGTaGGAGCCTTTTCTGGGATCAGTCTCAGGAGAGAGTCGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: KSWGREDINWEDGDW*EPFLGSVSGESREE
Trigger: CTCTTCCCGACTCTCTCCTGAGACTGATCCCAGAAAAGGCTCTCACCAGTCTCCGTCTTCCCAGTTTATGTCCTCCCGTCCCCAGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557876.1
CDS GCA 90 bp CATCTGGCTGGCACACATAGTGGCCGAAGTGGTCATTGCGCTTCTTaGACAGGCGGGAGCAGTTGTCTCCATAGTAGTTGTCACTGCAGA +
Preference number: 5 (lower is better)
Translates to: HLAGTHSGRSGHCAS*TGGSSCLHSSCHCR
Trigger: TCTGCAGTGACAACTACTATGGAGACAACTGCTCCCGCCTGTGCAAGAAGCGCAATGACCACTTCGGCCACTATGTGTGCCAGCCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000559440.1
CDS-3UTR CAA 90 bp CCCAAAGGTGTGGAAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTTGGTCATTGCGCTTCTaGCACAGGCGGGAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: PKGVEGYCISWQVHSLSGWSLRF*HRREQL
Trigger: CAACTGCTCCCGCCTGTGCAAGAAGCGCAATGACCA...ACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp AAGGTGTGGAAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCCTTGGCCGAAGTGGTCATaGCGCTTCTTGCACAGGCGG +
Preference number: 5 (lower is better)
Translates to: KVWKGIASLGKFTVCPVPWPKWS*RFLHRR
Trigger: CCGCCTGTGCAAGAAGCGCAATGACCACTTCGGCCA...AGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp AAGGTGTGGAAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCCTCACGTTGCCCCATTCTaGCATGGGGAGTGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: KVWKGIASLGKFTVCPVPHVAPF*HGEWWV
Trigger: CACCCACCACTCCCCATGCAAGAATGGGGCAACGTG...AGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp GGTGCAGCTGCCAATCTGATGCCAGACAGACACCCAAAGGTGTGGAAGGGTATTTCTCTCCTTTCTGATTaGGGCCCAACTGTCGCCGTG +
Preference number: 5 (lower is better)
Translates to: GAAANLMPDRHPKVWKGISLLSD*GPTVAV
Trigger: CACGGCGACAGTTGGGCCCAAATCAGAAAGGAGAGA...AATACCCTTCCACACCTTTGGGTGTCTGTCTGGCATCAGATTGGCAGCTGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS GCA 90 bp ACAAGTTGCCATCTGGCTGGCACACATAGTGGCCGAAGTGGTCATTaGGCTTCTTGCACAGGCGGGAGCAGTTGTCTCCATAGTAGTTGT +
Preference number: 5 (lower is better)
Translates to: TSCHLAGTHSGRSGH*ASCTGGSSCLHSSC
Trigger: ACAACTACTATGGAGACAACTGCTCCCGCCTGTGCAAGAAGCGCAATGACCACTTCGGCCACTATGTGTGCCAGCCAGATGGCAACTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000559440.1
CDS CCA 90 bp TGGTTTGTGTTTTTAAGCTGGGCGGCAGGAATCAGGTTGTCCTTCTaGAAGTCCGACAAGTTGTTCATGGCTTCCCTGCTGCCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: WFVFLSWAAGIRLSF*KSDKLFMASLLPSS
Trigger: GGACGACGGCAGCAGGGAAGCCATGAACAACTTGTCGGACTTCCAGAAGGACAACCTGATTCCTGCCGCCCAGCTTAAAAACACAAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp AAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCCTGCCATTCCCCCCTGGATGGCGATCTaGCTGATGAGTGCATCTGGT +
Preference number: 5 (lower is better)
Translates to: KGIASLGKFTVCPVPAIPPWMAI*LMSASG
Trigger: ACCAGATGCACTCATCAGCAAGATCGCCATCCAGGG...GGGAATGGCAGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp GTCCGGTTCCTGCCATTCCCTCCTCCTCCTGAGAGCAGCACGTTGCATATGAAAGCAGTAGTTGAGATCTaGGTCACAAAACAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: VRFLPFPPPPESSTLHMKAVVEI*VTKQAS
Trigger: GGAGGCCTGTTTTGTGACCAAGATCTCAACTACTGC...TTTCATATGCAACGTGCTGCTCTCAGGAGGAGGAGGGAATGGCAGGAACCGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp AAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCCTGCCATTCCCACTTTCTTCTCGCAGTaGGAGCCGGTGAAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: KGIASLGKFTVCPVPAIPTFFSQ*EPVKLG
Trigger: CCCCAACTTCACCGGCTCCAACTGCGAGAAGAAAGT...GGGAATGGCAGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp AAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCCTGCCATTCCCTGGAAGTCCGACAAGTaGTTCATGGCTTCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: KGIASLGKFTVCPVPAIPWKSDK*FMASLL
Trigger: CAGCAGGGAAGCCATGAACAACTTGTCGGACTTCCA...GGGAATGGCAGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp AGTGGCATCTCTCTTCTCTTCTGTTCCTCTGGTTGGTGCAGCTGCCAATCTGATGGGCCAAAGGCACTTTaGGAAACACGGATGCCAGTG +
Preference number: 5 (lower is better)
Translates to: SGISLLFCSSGWCSCQSDGPKAL*ETRMPV
Trigger: CACTGGCATCCGTGTTTCCAAAAGTGCCTTTGGCCC...ATCAGATTGGCAGCTGCACCAACCAGAGGAACAGAAGAGAAGAGAGATGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CCA 90 bp TCCTCTCCTCTGATATCAAACACACAGACTGGTACATGGAGTCCCTaGGGGAGCATATCGCTGATATCCGACACTCTGGCTTTTCACTGT +
Preference number: 5 (lower is better)
Translates to: SSPLISNTQTGTWSP*GSISLISDTLAFHC
Trigger: ACAGTGAAAAGCCAGAGTGTCGGATATCAGCGATATGCTCCCCCAGGGACTCCATGTACCAGTCTGTGTGTTTGATATCAGAGGAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CCA 90 bp CACATTCATTCCTCTCCTCTGATATCAAACACACAGACTGGTACATaGAGTCCCTGGGGGAGCATATCGCTGATATCCGACACTCTGGCT +
Preference number: 5 (lower is better)
Translates to: HIHSSPLISNTQTGT*SPWGSISLISDTLA
Trigger: AGCCAGAGTGTCGGATATCAGCGATATGCTCCCCCAGGGACTCCATGTACCAGTCTGTGTGTTTGATATCAGAGGAGAGGAATGAATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp AAGGTGTGGAAGGGTATTGCATCTCTTGGCAAGTTCACAGTCTGTCCGGTTCCTCCTGAGAGCAGCACGTaGCATATGAAAAACGTCCCA +
Preference number: 5 (lower is better)
Translates to: KVWKGIASLGKFTVCPVPPESST*HMKNVP
Trigger: TGGGACGTTTTTCATATGCAACGTGCTGCTCTCAGG...AGGAACCGGACAGACTGTGAACTTGCCAAGAGATGCAATACCCTTCCACACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS-3UTR CAA 90 bp AGTGGCATCTCTCTTCTCTTCTGTTCCTCTGGTTGGTGCAGCTGCCAATCTGATTTCTCTCCTAAGCTCTaGTCACTGTGGGGAAACTTT +
Preference number: 5 (lower is better)
Translates to: SGISLLFCSSGWCSCQSDFSPKL*SLWGNF
Trigger: AAAGTTTCCCCACAGTGACAAGAGCTTAGGAGAGAA...ATCAGATTGGCAGCTGCACCAACCAGAGGAACAGAAGAGAAGAGAGATGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS TCA 72 bp CCGCTTTCCCGCGCGTCCGCCAGCCGGCGGGGTCCCTaGAAAGAGGCGCTCCTCTCGGGACGCTGCTCCCCT +
Preference number: 6 (lower is better)
Translates to: PLSRASASRRGP*KEALLSGRCSP
Trigger: AGGGGAGCAGCGTCCCGAGAGGAGCGCCTCTTTTCAGGGACCCCGCCGGCTGGCGGACGCGCGGGAAAGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000557876.1
CDS CCA 72 bp TGTACGCTGCACCAAGGCGGCTGGGGCTGCGGCTCTTaGCCTCGTGTTCCCGGCCTGCGCGCAGCGCCGCTA +
Preference number: 6 (lower is better)
Translates to: CTLHQGGWGCGS*PRVPGLRAAPL
Trigger: TAGCGGCGCTGCGCGCAGGCCGGGAACACGAGGCCAAGAGCCGCAGCCCCAGCCGCCTTGGTGCAGCGTACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000557876.1
CDS GCA 72 bp GGGCTTTGGTCCCAGGGCGCCTCCTCTCTCGGCTTCTaGGACCTCCCAGTGCGCCCAGGCTGTGCTCACCGG +
Preference number: 6 (lower is better)
Translates to: GLWSQGASSLGF*DLPVRPGCAHR
Trigger: CCGGTGAGCACAGCCTGGGCGCACTGGGAGGTCGCAGAAGCCGAGAGAGGAGGCGCCCTGGGACCAAAGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557876.1
CDS GCA 72 bp TGGTGCCCAATACCGGCGTGGAGACGGTCCCGAAGGTaGAGGGTCCGGGCGAGACGACCGCCTGGAAGTGCT +
Preference number: 6 (lower is better)
Translates to: WCPIPAWRRSRR*RVRARRPPGSA
Trigger: AGCACTTCCAGGCGGTCGTCTCGCCCGGACCCTGCACCTTCGGGACCGTCTCCACGCCGGTATTGGGCACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000557876.1
CDS CCA 72 bp CCCGGACAGCGAAGGAGTTGGTGCCCAATACCGGCGTaGAGACGGTCCCGAAGGTGCAGGGTCCGGGCGAGA +
Preference number: 6 (lower is better)
Translates to: PGQRRSWCPIPA*RRSRRCRVRAR
Trigger: TCTCGCCCGGACCCTGCACCTTCGGGACCGTCTCCACGCCGGTATTGGGCACCAACTCCTTCGCTGTCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000557876.1
CDS CCA 72 bp CCCCGCCGCTACTGTCGTCCCGGACAGCGAAGGAGTTaGTGCCCAATACCGGCGTGGAGACGGTCCCGAAGG +
Preference number: 6 (lower is better)
Translates to: PRRYCRPGQRRS*CPIPAWRRSRR
Trigger: CCTTCGGGACCGTCTCCACGCCGGTATTGGGCACCAACTCCTTCGCTGTCCGGGACGACAGTAGCGGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000557876.1
CDS CAA 72 bp CCCCCGCCGCTACTGTCGTCCCGGACAGCGAAGGAGTaGGTGCCCAATACCGGCGTGGAGACGGTCCCGAAG +
Preference number: 6 (lower is better)
Translates to: PPPLLSSRTAKE*VPNTGVETVPK
Trigger: CTTCGGGACCGTCTCCACGCCGGTATTGGGCACCAACTCCTTCGCTGTCCGGGACGACAGTAGCGGCGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000557876.1
CDS GCA 72 bp CGCCGCTACTGTCGTCCCGGACAGCGAAGGAGTTGGTaGCCAATACCGGCGTGGAGACGGTCCCGAAGGTGC +
Preference number: 6 (lower is better)
Translates to: RRYCRPGQRRSW*PIPAWRRSRRC
Trigger: GCACCTTCGGGACCGTCTCCACGCCGGTATTGGGCACCAACTCCTTCGCTGTCCGGGACGACAGTAGCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000557876.1
CDS GCA 72 bp GGCAAGGCCTCTGGCCGCAGGTCGTCTCCTGGCGCGTaGCAAGCTTCGATGATGAGCGAGAAGGTACCCGGC +
Preference number: 6 (lower is better)
Translates to: GKASGRRSSPGA*QASMMSEKVPG
Trigger: GCCGGGTACCTTCTCGCTCATCATCGAAGCTTGGCACGCGCCAGGAGACGACCTGCGGCCAGAGGCCTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CCA 72 bp GCAGCTGCCGCTGTAGGTAATCCAGGTGACTACGGCTaGGCGGCGACCGCGCCGAGGACGCGTCTTCTGTCT +
Preference number: 6 (lower is better)
Translates to: AAAAVGNPGDYG*AATAPRTRLLS
Trigger: AGACAGAAGACGCGTCCTCGGCGCGGTCGCCGCCCAGCCGTAGTCACCTGGATTACCTACAGCGGCAGCTGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000557876.1
CDS CAA 72 bp TCGCAAGGCCGCCCACTGGCCAGTACGCCGCGCTCGTaGATGAACTCCTGCAGCTGCAGCTGGAAGACGCCG +
Preference number: 6 (lower is better)
Translates to: SQGRPLASTPRS*MNSCSCSWKTP
Trigger: CGGCGTCTTCCAGCTGCAGCTGCAGGAGTTCATCAACGAGCGCGGCGTACTGGCCAGTGGGCGGCCTTGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000557876.1
CDS CAA 72 bp CCCAGGCTAGAGAGGACCCTGGGAGCAGGGGGTCCTTaGGTGCCCATTCAGGGGTTCTGCCTCCAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: PRLERTLGAGGP*VPIQGFCLQRW
Trigger: CCACCTCTGGAGGCAGAACCCCTGAATGGGCACCAAAGGACCCCCTGCTCCCAGGGTCCTCTCTAGCCTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559440.1
CDS GCA 72 bp AGCTGGGCGGCAAGCCCACGGGGAACTCGCAGCGGCTaGCCACAAAGCCATAAGGGCAGTTGCACACAAAGG +
Preference number: 6 (lower is better)
Translates to: SWAASPRGTRSG*PQSHKGSCTQR
Trigger: CCTTTGTGTGCAACTGCCCTTATGGCTTTGTGGGCAGCCGCTGCGAGTTCCCCGTGGGCTTGCCGCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS GCA 72 bp TCTGGAAGTCCGACAAGTTGTTCATGGCTTCCCTGCTaGCGTCGTCCGGCCGTCGAAGCCGCAGCTGCCGCA +
Preference number: 6 (lower is better)
Translates to: SGSPTSCSWLPC*RRPAVEAAAAA
Trigger: TGCGGCAGCTGCGGCTTCGACGGCCGGACGACGGCAGCAGGGAAGCCATGAACAACTTGTCGGACTTCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS GCA 72 bp CCTTCTGGAAGTCCGACAAGTTGTTCATGGCTTCCCTaGTGCCGTCGTCCGGCCGTCGAAGCCGCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: PSGSPTSCSWLP*CRRPAVEAAAA
Trigger: GGCAGCTGCGGCTTCGACGGCCGGACGACGGCAGCAGGGAAGCCATGAACAACTTGTCGGACTTCCAGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CCA 72 bp GGAGCCCTGGATGGCGATCTTGCTGATGAGTGCATCTaGTGGCAAGGCCTCTGGCCGCAGGTCGTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: GALDGDLADECI*WQGLWPQVVSW
Trigger: CCAGGAGACGACCTGCGGCCAGAGGCCTTGCCACCAGATGCACTCATCAGCAAGATCGCCATCCAGGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CCA 72 bp CGGAGCGAGCTACTCACCTGGCCGCAGGTCGTCTCCTaGCGCGTGCCAAGCTTCGATGATGAGCGAGAAGGT +
Preference number: 6 (lower is better)
Translates to: RSELLTWPQVVS*RVPSFDDEREG
Trigger: ACCTTCTCGCTCATCATCGAAGCTTGGCACGCGCCAGGAGACGACCTGCGGCCAGGTGAGTAGCTCGCTCCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557876.1
CDS CAA 90 bp AGCTGGGCGGCAGGAATCAGGTTGTCCTTCTGGAAGTCCGACAAGTaGTTCATGGCTTCCCTGCTGCCGTCGTCCGGCCGTCGAAGCCGC +
Preference number: 6 (lower is better)
Translates to: SWAAGIRLSFWKSDK*FMASLLPSSGRRSR
Trigger: GCGGCTTCGACGGCCGGACGACGGCAGCAGGGAAGCCATGAACAACTTGTCGGACTTCCAGAAGGACAACCTGATTCCTGCCGCCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS GCA 72 bp CCCAGCCCTCATCACAAGTACATTGCCAGGGAGTGCTaGAGGTGCCGTGGCGACAGCCATTGTGGGGGATGC +
Preference number: 6 (lower is better)
Translates to: PSPHHKYIAREC*RCRGDSHCGGC
Trigger: GCATCCCCCACAATGGCTGTCGCCACGGCACCTGCAGCACTCCCTGGCAATGTACTTGTGATGAGGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000559440.1
CDS GCA 72 bp CTCCCCAGCCCTCATCACAAGTACATTGCCAGGGAGTaGTGCAGGTGCCGTGGCGACAGCCATTGTGGGGGA +
Preference number: 6 (lower is better)
Translates to: LPSPHHKYIARE*CRCRGDSHCGG
Trigger: TCCCCCACAATGGCTGTCGCCACGGCACCTGCAGCACTCCCTGGCAATGTACTTGTGATGAGGGCTGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000559440.1
CDS CCA 72 bp ATCTGGTGGCAAGGCCTCTGGCCGCAGGTCGTCTCCTaGCGCGTGCCAAGCTTCGATGATGAGCGAGAAGGT +
Preference number: 6 (lower is better)
Translates to: IWWQGLWPQVVS*RVPSFDDEREG
Trigger: ACCTTCTCGCTCATCATCGAAGCTTGGCACGCGCCAGGAGACGACCTGCGGCCAGAGGCCTTGCCACCAGAT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CCA 72 bp ATGAGCCCATTCTCCAGGTCATGGCAAGTGCCACCGTaGGCGCAAGGGTTACGGGCACAGTCGCTGACGTGG +
Preference number: 6 (lower is better)
Translates to: MSPFSRSWQVPP*AQGLRAQSLTW
Trigger: CCACGTCAGCGACTGTGCCCGTAACCCTTGCGCCCACGGTGGCACTTGCCATGACCTGGAGAATGGGCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS TCA 72 bp GGTCAGGGAAGGGTCGCCAGTCCCCAAGGGTGCCAGTaGCGGCTGGCCAATGTCCTTCTTGGCTGTGATGAT +
Preference number: 6 (lower is better)
Translates to: GQGRVASPQGCQ*RLANVLLGCDD
Trigger: ATCATCACAGCCAAGAAGGACATTGGCCAGCCGTCACTGGCACCCTTGGGGACTGGCGACCCTTCCCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559440.1
CDS GCA 72 bp GCCAGCCTGGGCGGCAGAGGCACTCTGCTGGCTTGCTaGAGTAGCCATTCTGTTCATGACAGCCCGAAAGAC +
Preference number: 6 (lower is better)
Translates to: ASLGGRGTLLAC*SSHSVHDSPKD
Trigger: GTCTTTCGGGCTGTCATGAACAGAATGGCTACTGCAGCAAGCCAGCAGAGTGCCTCTGCCGCCCAGGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000559440.1
CDS GCA 72 bp CCTGCCAGCCTGGGCGGCAGAGGCACTCTGCTGGCTTaGTGCAGTAGCCATTCTGTTCATGACAGCCCGAAA +
Preference number: 6 (lower is better)
Translates to: PASLGGRGTLLA*CSSHSVHDSPK
Trigger: TTTCGGGCTGTCATGAACAGAATGGCTACTGCAGCAAGCCAGCAGAGTGCCTCTGCCGCCCAGGCTGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000559440.1
CDS GCA 72 bp CAAAACAGGCCTCCCCAGCCCTCATCACAAGTACATTaGCAGGGAGTGCTGCAGGTGCCGTGGCGACAGCCA +
Preference number: 6 (lower is better)
Translates to: QNRPPQPSSQVH*QGVLQVPWRQP
Trigger: TGGCTGTCGCCACGGCACCTGCAGCACTCCCTGGCAATGTACTTGTGATGAGGGCTGGGGAGGCCTGTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000559440.1
CDS GCA 72 bp CAACCAATCAGCCCAGTTATCCAGATGACCCCCGCCTaGCAGCAAGAACAGGCCAGAGGGACCCAAAGCCCC +
Preference number: 6 (lower is better)
Translates to: QPISPVIQMTPA*QQEQARGTQSP
Trigger: GGGGCTTTGGGTCCCTCTGGCCTGTTCTTGCTGGCAGGCGGGGGTCATCTGGATAACTGGGCTGATTGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559440.1
CDS CCA 72 bp CCCAGTCCAACCGGGCAGGCAGGACAAGTTGCCATCTaGCTGGCACACATAGTGGCCGAAGTGGTCATTGCG +
Preference number: 6 (lower is better)
Translates to: PSPTGQAGQVAI*LAHIVAEVVIA
Trigger: CGCAATGACCACTTCGGCCACTATGTGTGCCAGCCAGATGGCAACTTGTCCTGCCTGCCCGGTTGGACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000559440.1
CDS CCA 72 bp GGTTCAGGCACTGTCCCCCGTTGGCACAGGGGTTGCTaGTGCACCTGTCCACTTTCTTCTCGCAGTTGGAGC +
Preference number: 6 (lower is better)
Translates to: GSGTVPRWHRGC*CTCPLSSRSWS
Trigger: GCTCCAACTGCGAGAAGAAAGTGGACAGGTGCACCAGCAACCCCTGTGCCAACGGGGGACAGTGCCTGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CCA 72 bp TCAGGTTGTCCTTCTGGAAGTCCGACAAGTTGTTCATaGCTTCCCTGCTGCCGTCGTCCGGCCGTCGAAGCC +
Preference number: 6 (lower is better)
Translates to: SGCPSGSPTSCS*LPCCRRPAVEA
Trigger: GGCTTCGACGGCCGGACGACGGCAGCAGGGAAGCCATGAACAACTTGTCGGACTTCCAGAAGGACAACCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CCA 72 bp GAAGGGTCGCCAGTCCCCAAGGGTGCCAGTGACGGCTaGCCAATGTCCTTCTTGGCTGTGATGATGGTGATC +
Preference number: 6 (lower is better)
Translates to: EGSPVPKGASDG*PMSFLAVMMVI
Trigger: GATCACCATCATCACAGCCAAGAAGGACATTGGCCAGCCGTCACTGGCACCCTTGGGGACTGGCGACCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559440.1
CDS GCA 72 bp ACTCGCAGCGGCTGCCCACAAAGCCATAAGGGCAGTTaGACACAAAGGTGTCTGTGGAGAGGTCGGTGTAGC +
Preference number: 6 (lower is better)
Translates to: TRSGCPQSHKGS*TQRCLWRGRCS
Trigger: GCTACACCGACCTCTCCACAGACACCTTTGTGTGCAACTGCCCTTATGGCTTTGTGGGCAGCCGCTGCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CAA 72 bp GCAGGAATCAGGTTGTCCTTCTGGAAGTCCGACAAGTaGTTCATGGCTTCCCTGCTGCCGTCGTCCGGCCGT +
Preference number: 6 (lower is better)
Translates to: AGIRLSFWKSDK*FMASLLPSSGR
Trigger: ACGGCCGGACGACGGCAGCAGGGAAGCCATGAACAACTTGTCGGACTTCCAGAAGGACAACCTGATTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CCA 72 bp TCACAAGTACATTGCCAGGGAGTGCTGCAGGTGCCGTaGCGACAGCCATTGTGGGGGATGCATTCGTTACAC +
Preference number: 6 (lower is better)
Translates to: SQVHCQGVLQVP*RQPLWGMHSLH
Trigger: GTGTAACGAATGCATCCCCCACAATGGCTGTCGCCACGGCACCTGCAGCACTCCCTGGCAATGTACTTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000559440.1
CDS TCA 72 bp GGACGGGAGGACATAAACTGGGAAGACGGAGACTGGTaGGAGCCTTTTCTGGGATCAGTCTCAGGAGAGAGT +
Preference number: 6 (lower is better)
Translates to: GREDINWEDGDW*EPFLGSVSGES
Trigger: ACTCTCTCCTGAGACTGATCCCAGAAAAGGCTCTCACCAGTCTCCGTCTTCCCAGTTTATGTCCTCCCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557876.1
CDS GCA 72 bp GGCACACATAGTGGCCGAAGTGGTCATTGCGCTTCTTaGACAGGCGGGAGCAGTTGTCTCCATAGTAGTTGT +
Preference number: 6 (lower is better)
Translates to: GTHSGRSGHCAS*TGGSSCLHSSC
Trigger: ACAACTACTATGGAGACAACTGCTCCCGCCTGTGCAAGAAGCGCAATGACCACTTCGGCCACTATGTGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249749.7
ENST00000559440.1
CDS CAA 72 bp GGGCCCTGGGGCCAGATTATAGTCCAATGTGTGGTTTaGCTGTTTGCCACAGTTGGACTTGTCCAGGCCACA +
Preference number: 6 (lower is better)
Translates to: GPWGQIIVQCVV*LFATVGLVQAT
Trigger: TGTGGCCTGGACAAGTCCAACTGTGGCAAACAGCAAAACCACACATTGGACTATAATCTGGCCCCAGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CCA 72 bp TTTTTAAGCTGGGCGGCAGGAATCAGGTTGTCCTTCTaGAAGTCCGACAAGTTGTTCATGGCTTCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: FLSWAAGIRLSF*KSDKLFMASLL
Trigger: CAGCAGGGAAGCCATGAACAACTTGTCGGACTTCCAGAAGGACAACCTGATTCCTGCCGCCCAGCTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CCA 72 bp CTGATATCAAACACACAGACTGGTACATGGAGTCCCTaGGGGAGCATATCGCTGATATCCGACACTCTGGCT +
Preference number: 6 (lower is better)
Translates to: LISNTQTGTWSP*GSISLISDTLA
Trigger: AGCCAGAGTGTCGGATATCAGCGATATGCTCCCCCAGGGACTCCATGTACCAGTCTGTGTGTTTGATATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CCA 72 bp TCCTCTCCTCTGATATCAAACACACAGACTGGTACATaGAGTCCCTGGGGGAGCATATCGCTGATATCCGAC +
Preference number: 6 (lower is better)
Translates to: SSPLISNTQTGT*SPWGSISLISD
Trigger: GTCGGATATCAGCGATATGCTCCCCCAGGGACTCCATGTACCAGTCTGTGTGTTTGATATCAGAGGAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CAA 90 bp TCCTTCTTCTGGTTTGTGTTTTTAAGCTGGGCGGCAGGAATCAGGTaGTCCTTCTGGAAGTCCGACAAGTTGTTCATGGCTTCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: SFFWFVFLSWAAGIR*SFWKSDKLFMASLL
Trigger: CAGCAGGGAAGCCATGAACAACTTGTCGGACTTCCAGAAGGACAACCTGATTCCTGCCGCCCAGCTTAAAAACACAAACCAGAAGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS GCA 72 bp GGGCCAGATTATAGTCCAATGTGTGGTTTTGCTGTTTaGCACAGTTGGACTTGTCCAGGCCACAGTCCACTT +
Preference number: 6 (lower is better)
Translates to: GPDYSPMCGFAV*HSWTCPGHSPL
Trigger: AAGTGGACTGTGGCCTGGACAAGTCCAACTGTGGCAAACAGCAAAACCACACATTGGACTATAATCTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CCA 72 bp TATAGTCCAATGTGTGGTTTTGCTGTTTGCCACAGTTaGACTTGTCCAGGCCACAGTCCACTTCCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: YSPMCGFAVCHS*TCPGHSPLPAP
Trigger: AGGAGCTGGAAGTGGACTGTGGCCTGGACAAGTCCAACTGTGGCAAACAGCAAAACCACACATTGGACTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CCA 72 bp CATTCATTCCTCTCCTCTGATATCAAACACACAGACTaGTACATGGAGTCCCTGGGGGAGCATATCGCTGAT +
Preference number: 6 (lower is better)
Translates to: HSFLSSDIKHTD*YMESLGEHIAD
Trigger: ATCAGCGATATGCTCCCCCAGGGACTCCATGTACCAGTCTGTGTGTTTGATATCAGAGGAGAGGAATGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7
CDS CAA 72 bp TGGTTTGTGTTTTTAAGCTGGGCGGCAGGAATCAGGTaGTCCTTCTGGAAGTCCGACAAGTTGTTCATGGCT +
Preference number: 6 (lower is better)
Translates to: WFVFLSWAAGIR*SFWKSDKLFMA
Trigger: AGCCATGAACAACTTGTCGGACTTCCAGAAGGACAACCTGATTCCTGCCGCCCAGCTTAAAAACACAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249749.7