RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DLGAP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000080845

Ensembl transcript IDs: ENST00000339266.10, ENST00000339266.9, ENST00000340491.8, ENST00000373907.6, ENST00000373913.7, ENST00000475894.5, ENST00000477195.1, ENST00000478910.5, ENST00000479220.5, ENST00000479951.1, ENST00000482037.5, ENST00000482872.5, ENST00000489701.5, ENST00000491207.5, ENST00000495241.5, ENST00000497862.1

Found 899 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGAGTCTCTTGCGGGCCTCCTGGCGCTGCTTGTCGCTGGCGTCTaGGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGCTGGCTT +
Preference number: 1 (lower is better)
Translates to: QESLAGLLALLVAGV*GLVAAHCRLGFGWL
Trigger: AAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAGCAGCGCCAGGAGGCCCGCAAGAGACTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR GCA 90 bp GCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTGAGTCCTaGCTGACACTGCCCAGGGCTGGCGGGGCACCTCCCAGTGAGGCG +
Preference number: 1 (lower is better)
Translates to: AKTKTSLICSAVSES*LTLPRAGGAPPSEA
Trigger: CGCCTCACTGGGAGGTGCCCCGCCAGCCCTGGGCAGTGTCAGGCAGGACTCACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR CCA 90 bp CGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTaGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTCTCTTCCG +
Preference number: 1 (lower is better)
Translates to: RWRLRPCRGSLPAWI*LASLGPEGVVSSLP
Trigger: CGGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR CCA 90 bp GCTTGTCGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTaGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTCT +
Preference number: 1 (lower is better)
Translates to: ACRWRLRPCRGSLPA*IWLASLGPEGVVSS
Trigger: AGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR GCA 90 bp GGCTTCGTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTaGTCAGCGGTGAGTGAGTCCTGCCTGACACTGCCCAGGGCTGGC +
Preference number: 1 (lower is better)
Translates to: GFVSFPPAKTKTSLI*SAVSESCLTLPRAG
Trigger: GCCAGCCCTGGGCAGTGTCAGGCAGGACTCACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGACGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR CCA 90 bp CCAAGGTCACAGACGGCGGCCAAGCTGGAAATGGGCCCCGGAGCAGACCCTTGGGGGCTCGTGACACCCTaGGAGTGGGATGCGGGGGCA +
Preference number: 2 (lower is better)
Translates to: PRSQTAAKLEMGPGADPWGLVTP*EWDAGA
Trigger: TGCCCCCGCATCCCACTCCCAGGGTGTCACGAGCCC...CCAAGGGTCTGCTCCGGGGCCCATTTCCAGCTTGGCCGCCGTCTGTGACCTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR CAA 90 bp CTCTTGCGGGCCTCCTGGCGCTGCTTGTCGCTGGCGTCTGAGGCCTaGTCGCGGCTCACTGCCGGCTTGGATTTGGCTGGCTTCTTTGGG +
Preference number: 2 (lower is better)
Translates to: LLRASWRCLSLASEA*SRLTAGLDLAGFFG
Trigger: CCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAGCAGCGCCAGGAGGCCCGCAAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR-3UTR TCA 90 bp CCAAGGTCACAGACGGCGGCCAAGCTGGAAATGGGCCCCGGAGCAGACCCTTGGCTGGGTGGGCATGGGTaGGCAGATGGGCGTTTGTTA +
Preference number: 2 (lower is better)
Translates to: PRSQTAAKLEMGPGADPWLGGHG*ADGRLL
Trigger: TAACAAACGCCCATCTGCTCACCCATGCCCACCCAG...CCAAGGGTCTGCTCCGGGGCCCATTTCCAGCTTGGCCGCCGTCTGTGACCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR GCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTTCCCCTACCCCGCCCTaGAGGCCCGGGCCATTGCAG +
Preference number: 2 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPSPTPP*RPGPLQ
Trigger: CTGCAATGGCCCGGGCCTGCAGGGCGGGGTAGGGGA...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR CAA 90 bp AGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGCTGGCTTCTTaGGGACCGGAGGGGGTGGTTTCTTCTCTTCCGATGTGGGCAGCG +
Preference number: 2 (lower is better)
Translates to: RPCRGSLPAWIWLAS*GPEGVVSSLPMWAA
Trigger: CGCTGCCCACATCGGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR CAA 90 bp TGCTTGTCGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTaGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: CLSLASEALSRLTAG*DLAGFFGTGGGGFF
Trigger: GAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR-3UTR CCA 90 bp GAGAGGGCTGAGACCCAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCCCGCAGTATGGAGGCTaGGCCGGGAGTTGCCGACGT +
Preference number: 2 (lower is better)
Translates to: ERAETQKAACHNGDHCVSPQYGG*AGSCRR
Trigger: ACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGG...GCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGTCTCAGCCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR CCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTCAGAGGCTGGGCAGATaGGCCCTTAGGAGTGCGGGG +
Preference number: 2 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPQRLGR*ALRSAG
Trigger: CCCCGCACTCCTAAGGGCCCATCTGCCCAGCCTCTG...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR CCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTGGCGCTGGGTGGGCATaGGTGAGCAGATGGGCGTTT +
Preference number: 2 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPGAGWA*VSRWAF
Trigger: AAACGCCCATCTGCTCACCCATGCCCACCCAGCGCC...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR TCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTAACCGCAGAGAGGGCTaGGACCCAGAAAGCCGCTTG +
Preference number: 2 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPNRREG*DPESRL
Trigger: CAAGCGGCTTTCTGGGTCTCAGCCCTCTCTGCGGTT...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR CCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTCAGAGCGGGGATAGCTaGGGAAAGGAGGGACATGGC +
Preference number: 2 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPQSGDS*GKEGHG
Trigger: GCCATGTCCCTCCTTTCCCCAGCTATCCCCGCTCTG...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR TCA 90 bp CCAAGGTCACAGACGGCGGCCAAGCTGGAAATGGGCCCCGGAGCAGACCCTTGGTTGTATGCGTCAATTTaGAAGTTGGCTCAGGGTCTC +
Preference number: 2 (lower is better)
Translates to: PRSQTAAKLEMGPGADPWLYASI*KLAQGL
Trigger: GAGACCCTGAGCCAACTTTCAAATTGACGCATACAA...CCAAGGGTCTGCTCCGGGGCCCATTTCCAGCTTGGCCGCCGTCTGTGACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR CCA 90 bp CCAAGGTCACAGACGGCGGCCAAGCTGGAAATGGGCCCCGGAGCAGACCCTTGGCGTCAATTTGAAAGTTaGCTCAGGGTCTCTAGACAG +
Preference number: 2 (lower is better)
Translates to: PRSQTAAKLEMGPGADPWRQFES*LRVSRQ
Trigger: CTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACG...CCAAGGGTCTGCTCCGGGGCCCATTTCCAGCTTGGCCGCCGTCTGTGACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR GCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTGAGGGACATGGCAGGTaGCCAAGGCTGCCCTTGGAC +
Preference number: 2 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSEGHGR*PRLPLD
Trigger: GTCCAAGGGCAGCCTTGGGCACCTGCCATGTCCCTC...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR CCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTGGGAAAGGAGGGACATaGCAGGTGCCCAAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSGKGGT*QVPKAA
Trigger: GGCAGCCTTGGGCACCTGCCATGTCCCTCCTTTCCC...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR CCA 90 bp GATTTAAAATCGTTTCTTTCCTCCTGCATGGTCTCAGAGCCTGGTCTGGGCCTCGGCGCTGCTTGTCGCTaGCGTCTGAGGCCTTGTCGC +
Preference number: 2 (lower is better)
Translates to: DLKSFLSSCMVSEPGLGLGAACR*RLRPCR
Trigger: GCGACAAGGCCTCAGACGCCAGCGACAAGCAGCGCC...GAGGCCCAGACCAGGCTCTGAGACCATGCAGGAGGAAAGAAACGATTTTAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR CAA 90 bp GATAGAACGAGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTaGCCGACGTCCATCTATCTAGTCCACCACGGCCAGCAAGAGGAA +
Preference number: 2 (lower is better)
Translates to: DRTSKKTAVWRLGRE*PTSIYLVHHGQQEE
Trigger: TTCCTCTTGCTGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACTCGTTCTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR CCA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGACAGAGCGGGGATAGCTaGGGAAAGGAGGGACATGGC +
Preference number: 2 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRQSGDS*GKEGHG
Trigger: GCCATGTCCCTCCTTTCCCCAGCTATCCCCGCTCTG...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR CCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTAGAAAACTCAGAGGCTaGGCAGATGGGCCCTTAGGA +
Preference number: 2 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPRKLRG*ADGPLG
Trigger: TCCTAAGGGCCCATCTGCCCAGCCTCTGAGTTTTCT...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR CCA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGAAAAAAGACCGCAGTATaGAGGCTGGGCCGGGAGTTG +
Preference number: 2 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRKKTAV*RLGREL
Trigger: CAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTT...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR GCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTACCCAGAAAGCCGCTTaGCACAATGGTGACCACTGT +
Preference number: 2 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSTQKAA*HNGDHC
Trigger: ACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGT...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR TCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTAACCATAGCAAAGGTTaGGAAAACTCTGTTCCGTTC +
Preference number: 2 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPNHSKG*ENSVPF
Trigger: GAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTT...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATACCGCAGTATGGAGGCTaGGCCGGGAGTTGCCGACGT +
Preference number: 2 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIPQYGG*AGSCRR
Trigger: ACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGG...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR CCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCCTGCCGGCTTGGATTTaGCTGGCTTCTTTGGGACCG +
Preference number: 2 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVLPAWI*LASLGP
Trigger: CGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAG...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR-3UTR TCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTTTGTATGCGTCAATTTaGAAGTTGGCTCAGGGTCTC +
Preference number: 2 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSLYASI*KLAQGL
Trigger: GAGACCCTGAGCCAACTTTCAAATTGACGCATACAA...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR CCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCACGGCTTGGATTTGGCTaGCTTCTTTGGGACCGGAGG +
Preference number: 2 (lower is better)
Translates to: VCVNLKVGSGSLDRITIARLGFG*LLWDRR
Trigger: CCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCG...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR-3UTR CCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGTGGGACCGGAGGGGGTaGTTTCTTCTCTTCCGATGT +
Preference number: 2 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKWDRRG*FLLFRC
Trigger: ACATCGGAAGAGAAGAAACCACCCCCTCCGGTCCCA...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAATTTGGCTGGCTTCTTTaGGACCGGAGGGGGTGGTTT +
Preference number: 2 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKFGWLL*DRRGWF
Trigger: AAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAA...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATATTCTTTCCTCCTGCATaGTCTCAGAGCCTGGTCTGG +
Preference number: 2 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIFFPPA*SQSLVW
Trigger: CCAGACCAGGCTCTGAGACCATGCAGGAGGAAAGAA...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR-3UTR TCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCAACCATAGCAAAGGTTaGGAAAACTCTGTTCCGTTC +
Preference number: 2 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVNHSKG*ENSVPF
Trigger: GAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTT...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339266.9
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
3UTR-3UTR TCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAAACCATAGCAAAGGTTaGGAAAACTCTGTTCCGTTC +
Preference number: 2 (lower is better)
Translates to: LVCVNLKVGSGSLDRITINHSKG*ENSVPF
Trigger: GAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTT...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339266.9
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
3UTR TCA 72 bp GCCCCTCGGGCACCGGACACAGGCGCGGCTGAGGACTaGCGGCCCCCTGGAAGCCACTCGGGAGTCCTAGAT +
Preference number: 3 (lower is better)
Translates to: APRAPDTGAAED*RPPGSHSGVLD
Trigger: ATCTAGGACTCCCGAGTGGCTTCCAGGGGGCCGTCAGTCCTCAGCCGCGCCTGTGTCCGGTGCCCGAGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR CCA 72 bp GGAGTCTCTTGCGGGCCTCCTGGCGCTGCTTGTCGCTaGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCT +
Preference number: 3 (lower is better)
Translates to: GVSCGPPGAACR*RLRPCRGSLPA
Trigger: AGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAGCAGCGCCAGGAGGCCCGCAAGAGACTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR TCA 72 bp CTTGCGGGCCTCCTGGCGCTGCTTGTCGCTGGCGTCTaGGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTT +
Preference number: 3 (lower is better)
Translates to: LAGLLALLVAGV*GLVAAHCRLGF
Trigger: AAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAGCAGCGCCAGGAGGCCCGCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR CCA 72 bp CTTGCCCAAGGTCACAGACGGCGGCCAAGCTGGAAATaGGCCCCGGAGCAGACCCTTGGTTCACCTGGGGAC +
Preference number: 3 (lower is better)
Translates to: LAQGHRRRPSWK*APEQTLGSPGD
Trigger: GTCCCCAGGTGAACCAAGGGTCTGCTCCGGGGCCCATTTCCAGCTTGGCCGCCGTCTGTGACCTTGGGCAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR CCA 72 bp TGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTaGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTG +
Preference number: 3 (lower is better)
Translates to: WRLRPCRGSLPA*IWLASLGPEGV
Trigger: CACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR CCA 72 bp GGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGCTaGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: GLVAAHCRLGFG*LLWDRRGWFLL
Trigger: GAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR CCA 72 bp CTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTaGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCT +
Preference number: 3 (lower is better)
Translates to: LRPCRGSLPAWI*LASLGPEGVVS
Trigger: AGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR TCA 72 bp CGAGAGCCAGCGGCGGCGGCGCTGGGTGGGCATGGGTaGGCAGATGGGCGTTTGTTAACTATACACTCTAAG +
Preference number: 3 (lower is better)
Translates to: REPAAAALGGHG*ADGRLLTIHSK
Trigger: CTTAGAGTGTATAGTTAACAAACGCCCATCTGCTCACCCATGCCCACCCAGCGCCGCCGCCGCTGGCTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR CCA 72 bp GCGGCTCACTGCCGGCTTGGATTTGGCTGGCTTCTTTaGGACCGGAGGGGGTGGTTTCTTCTCTTCCGATGT +
Preference number: 3 (lower is better)
Translates to: AAHCRLGFGWLL*DRRGWFLLFRC
Trigger: ACATCGGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR-3UTR CAA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGAAGGCTGGGCCGGGAGTaGCCGACGTCCATCTATCTA +
Preference number: 3 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRRLGRE*PTSIYL
Trigger: TAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCT...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR GCA 72 bp TCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTaGTCAGCGGTGAGTGAGTCCTGCCTGACACTGCCC +
Preference number: 3 (lower is better)
Translates to: SFPPAKTKTSLI*SAVSESCLTLP
Trigger: GGGCAGTGTCAGGCAGGACTCACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR CCA 72 bp CATAAGAATGAAAATCAAGGTCAGAGCGGGGATAGCTaGGGAAAGGAGGGACATGGCAGGTGCCCAAGGCTG +
Preference number: 3 (lower is better)
Translates to: HKNENQGQSGDS*GKEGHGRCPRL
Trigger: CAGCCTTGGGCACCTGCCATGTCCCTCCTTTCCCCAGCTATCCCCGCTCTGACCTTGATTTTCATTCTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR CCA 72 bp TTCTCATCAGATAGAACGAGTAAAAAGACCGCAGTATaGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTAT +
Preference number: 3 (lower is better)
Translates to: FSSDRTSKKTAV*RLGRELPTSIY
Trigger: ATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACTCGTTCTATCTGATGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR CAA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCATTTGGCTGGCTTCTTaGGGACCGGAGGGGGTGGTT +
Preference number: 3 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVIWLAS*GPEGVV
Trigger: AACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAAT...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR-3UTR CAA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCACTGCCGGCTTGGATTaGGCTGGCTTCTTTGGGACC +
Preference number: 3 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVTAGLD*AGFFGT
Trigger: GGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGT...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR-3UTR CAA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACGGCTCACTGCCGGCTaGGATTTGGCTGGCTTCTTT +
Preference number: 3 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRRLTAG*DLAGFF
Trigger: AAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR-3UTR CAA 90 bp AGTGTGAGTTCTCATCAGATAGAACGAGTAAAAAGACCGCAGTATGGAGGCTGGCTTGTATGCGTCAATTaGAAAGTTGGCTCAGGGTCT +
Preference number: 3 (lower is better)
Translates to: SVSSHQIERVKRPQYGGWLVCVN*KVGSGS
Trigger: AGACCCTGAGCCAACTTTCAAATTGACGCATACAAG...CCAGCCTCCATACTGCGGTCTTTTTACTCGTTCTATCTGATGAGAACTCACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
3UTR-3UTR CAA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATACTTGTATGCGTCAATTaGAAAGTTGGCTCAGGGTCT +
Preference number: 3 (lower is better)
Translates to: LVCVNLKVGSGSLDRITILVCVN*KVGSGS
Trigger: AGACCCTGAGCCAACTTTCAAATTGACGCATACAAG...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339266.9
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
3UTR CCA 72 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTaGCTCAGGGTCTCTAGACAGAATAACCATAGCAAA +
Preference number: 3 (lower is better)
Translates to: QIVSPCMRQFES*LRVSRQNNHSK
Trigger: TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339266.9
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
3UTR CAA 72 bp CTGCCCTCCCCTACCCCGCCCTGCAGGCCCGGGCCATaGCAGCTCAGGGCTCGTGACACCCTGGGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: LPSPTPPCRPGP*QLRARDTLGVG
Trigger: TCCCACTCCCAGGGTGTCACGAGCCCTGAGCTGCAATGGCCCGGGCCTGCAGGGCGGGGTAGGGGAGGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp CCAAGGTCACAGACGGCGGCCAAGCTGGAAATGGGCCCCGGAGCAGACCCTTGGCAGAGGCTGGGCCACTaGTGCGGAAGGCGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: PRSQTAAKLEMGPGADPWQRLGH*CGRRRP
Trigger: AGGCCGGCGCCTTCCGCAGCAGTGGCCCAGCCTCTG...CCAAGGGTCTGCTCCGGGGCCCATTTCCAGCTTGGCCGCCGTCTGTGACCTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCATCGGCGGCAGGCCCCTaGCTGTGCCGGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPSAAGP*LCRLCW
Trigger: CCAGCAGAGCCGGCACAGCCAGGGGCCTGCCGCCGA...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp CCAAGGTCACAGACGGCGGCCAAGCTGGAAATGGGCCCCGGAGCAGACCCTTGGCCCGGAGCAGACCCTTaGTTCACCTGGGGACGGGGG +
Preference number: 4 (lower is better)
Translates to: PRSQTAAKLEMGPGADPWPGADP*FTWGRG
Trigger: CCCCCGTCCCCAGGTGAACCAAGGGTCTGCTCCGGG...CCAAGGGTCTGCTCCGGGGCCCATTTCCAGCTTGGCCGCCGTCTGTGACCTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
3UTR CAA 72 bp GCCTCCTGGCGCTGCTTGTCGCTGGCGTCTGAGGCCTaGTCGCGGCTCACTGCCGGCTTGGATTTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ASWRCLSLASEA*SRLTAGLDLAG
Trigger: GCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAGCAGCGCCAGGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR TCA 90 bp CCAAGGTCACAGACGGCGGCCAAGCTGGAAATGGGCCCCGGAGCAGACCCTTGGGGAGCTCCACCAGCCTaGGATGTTGGAGCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PRSQTAAKLEMGPGADPWGAPPA*DVGAAA
Trigger: CGCAGCCGCTCCAACATCTCAGGCTGGTGGAGCTCC...CCAAGGGTCTGCTCCGGGGCCCATTTCCAGCTTGGCCGCCGTCTGTGACCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp CCAAGGTCACAGACGGCGGCCAAGCTGGAAATGGGCCCCGGAGCAGACCCTTGGCTGTGCCGGCTCTGCTaGGGAGCTGGAGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PRSQTAAKLEMGPGADPWLCRLC*GAGGGL
Trigger: GAGACCTCCTCCAGCTCCCCAGCAGAGCCGGCACAG...CCAAGGGTCTGCTCCGGGGCCCATTTCCAGCTTGGCCGCCGTCTGTGACCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp CCAAGGTCACAGACGGCGGCCAAGCTGGAAATGGGCCCCGGAGCAGACCCTTGGGGCATCCGTCTCGCGTaGGGACAGCAGCGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PRSQTAAKLEMGPGADPWGIRLA*GQQRGA
Trigger: AGCACCACGCTGCTGTCCCCACGCGAGACGGATGCC...CCAAGGGTCTGCTCCGGGGCCCATTTCCAGCTTGGCCGCCGTCTGTGACCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp CCAAGGTCACAGACGGCGGCCAAGCTGGAAATGGGCCCCGGAGCAGACCCTTGGCAGAGGCTGGGCAGATaGGCCCTTAGGAGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: PRSQTAAKLEMGPGADPWQRLGR*ALRSAG
Trigger: CCCCGCACTCCTAAGGGCCCATCTGCCCAGCCTCTG...CCAAGGGTCTGCTCCGGGGCCCATTTCCAGCTTGGCCGCCGTCTGTGACCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCACACACACCCGCCTCCTaGCAGGTGCCCCGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPHTPAS*QVPREP
Trigger: TGGCTCTCGGGGCACCTGGCAGGAGGCGGGTGTGTG...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp GCTTGTCGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGGGCGCTGCTTGTCGCTaGCGTCTGAGGCCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: ACRWRLRPCRGSLPAWIWGAACR*RLRPCR
Trigger: GCGACAAGGCCTCAGACGCCAGCGACAAGCAGCGCC...CCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR CAA 72 bp CTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTaGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LASEALSRLTAG*DLAGFFGTGGG
Trigger: ACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR TCA 90 bp CCAAGGTCACAGACGGCGGCCAAGCTGGAAATGGGCCCCGGAGCAGACCCTTGGCTCACAACATGCCTGTaGGGTAGGGAGGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PRSQTAAKLEMGPGADPWLTTCL*GREGQG
Trigger: TCCCTGCCCCTCCCTACCTCACAGGCATGTTGTGAG...CCAAGGGTCTGCTCCGGGGCCCATTTCCAGCTTGGCCGCCGTCTGTGACCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp TTGTCGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGCTGCAATCTTGGGGGCCTaGCGGGGACCGGCATCGATG +
Preference number: 4 (lower is better)
Translates to: LSLASEALSRLTAGLDLAAILGA*RGPASM
Trigger: CATCGATGCCGGTCCCCGGCAGGCCCCCAAGATTGC...AGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR GCA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCACCTTGGCCCGCTCCTTaGTTTTGGCCCTCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPPWPAP*FWPSGP
Trigger: AGGGCCGGAGGGCCAAAAGCAAGGAGCGGGCCAAGG...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCAGGCGCTGCTTGTCGCTaGCGTCTGAGGCCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPGAACR*RLRPCR
Trigger: GCGACAAGGCCTCAGACGCCAGCGACAAGCAGCGCC...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCACTCAGGAGCGGGCACTaGACCGAGGGCTGGCACACA +
Preference number: 4 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPLRSGH*TEGWHT
Trigger: TGTGTGCCAGCCCTCGGTCCAGTGCCCGCTCCTGAG...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp CCAAGGTCACAGACGGCGGCCAAGCTGGAAATGGGCCCCGGAGCAGACCCTTGGACCAGCCTGAGATGTTaGAGCGGCTGCGCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: PRSQTAAKLEMGPGADPWTSLRC*SGCAVW
Trigger: CCAAACGGCGCAGCCGCTCCAACATCTCAGGCTGGT...CCAAGGGTCTGCTCCGGGGCCCATTTCCAGCTTGGCCGCCGTCTGTGACCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCAGGACTGACGGCCCCCTaGAAGCCACTCGGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPGLTAP*KPLGSP
Trigger: AGGACTCCCGAGTGGCTTCCAGGGGGCCGTCAGTCC...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp CGCTGCTTGTCGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTCTGGGCTGGTTCTCTaGCTGGCCCAGGGACAGTTT +
Preference number: 4 (lower is better)
Translates to: RCLSLASEALSRLTAGLDSGLVL*LAQGQF
Trigger: AAACTGTCCCTGGGCCAGTCAGAGAACCAGCCCAGA...ATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAGCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR GCA 90 bp GCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGCTGGCTTCTTTTGGGCGGTCGGGTACTaGTGTCCAGGCTGTCCGACG +
Preference number: 4 (lower is better)
Translates to: ASEALSRLTAGLDLAGFFWAVGY*CPGCPT
Trigger: CGTCGGACAGCCTGGACAGCAGTACCCGACCGCCCA...AAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR GCA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCACTCCTGCGAGCAGCCTaGCTGGATGGCACGCAGGTA +
Preference number: 4 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPLLRAA*LDGTQV
Trigger: TACCTGCGTGCCATCCAGGCAGGCTGCTCGCAGGAG...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp CGCTGCTTGTCGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGCTCAGGCCCGACTaGCTAGTCACCTCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: RCLSLASEALSRLTAGLDLLRPD*LVTSLL
Trigger: CAAGAGCGAGGTGACTAGCCAGTCGGGCCTGAGCAA...ATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAGCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CCA 90 bp TCACTGCCGGCTTGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTCTCTTGCGGGCCTCCTaGCGCTGCTTGTCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: SLPAWIWLASLGPEGVVSLLRAS*RCLSLA
Trigger: CGCCAGCGACAAGCAGCGCCAGGAGGCCCGCAAGAG...AGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CCA 90 bp AGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCAGCGGCGGCGGCGCTaGGTGGGCATGGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SKKTAVWRLGRELPTSIYQRRRR*VGMGEQ
Trigger: CTGCTCACCCATGCCCACCCAGCGCCGCCGCCGCTG...ATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp CGCTGCTTGTCGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATGGCTGGTTCTCTGACTaGCCCAGGGACAGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: RCLSLASEALSRLTAGLDGWFSD*PRDSFH
Trigger: GTGGAAACTGTCCCTGGGCCAGTCAGAGAACCAGCC...ATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAGCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR TCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTCCTCGTGGGCGTGGCTaGGGGTCAGAGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPPRGRG*GSEWTR
Trigger: CCTGGTCCACTCTGACCCTCAGCCACGCCCACGAGG...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR TCA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGGGCGCGGCTGAGGACTaGCGGCCCCCTGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: QVPKAALGLSSSCKQASVGAAED*RPPGSH
Trigger: GTGGCTTCCAGGGGGCCGTCAGTCCTCAGCCGCGCC...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCACTCACAACATGCCTGTaGGGTAGGGAGGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPLTTCL*GREGQG
Trigger: TCCCTGCCCCTCCCTACCTCACAGGCATGTTGTGAG...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGGGGACAGCAGCGTGGTaGTCCACTCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: QVPKAALGLSSSCKQASVGTAAW*STRRRR
Trigger: GCGGCGGCGGCGAGTGGAGCACCACGCTGCTGTCCC...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp GCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTCTCTTCCGATGTGGGCAGCGCGTGGAGGGACCGGTaGCGGGGTCTTCTTATACGC +
Preference number: 4 (lower is better)
Translates to: AGFFGTGGGGFFSSDVGSAWRDR*RGLLIR
Trigger: GCGTATAAGAAGACCCCGCCACCGGTCCCTCCACGC...GCTGCCCACATCGGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CCA 90 bp CACTGCCGGCTTGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTCTGTGCCGGCTCTGCTaGGGAGCTGGAGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: HCRLGFGWLLWDRRGWFLLCRLC*GAGGGL
Trigger: GAGACCTCCTCCAGCTCCCCAGCAGAGCCGGCACAG...AAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CCA 90 bp AGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATAGCGGCTGCGCCGTTTaGGCTCCCCAGCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SKKTAVWRLGRELPTSIYSGCAV*APQPWP
Trigger: GGGCCAAGGCTGGGGAGCCCAAACGGCGCAGCCGCT...ATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTGCCGGTACTGGGCGGTaGGGAGAGGGACTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPAGTGR*GEGLQG
Trigger: TCCCTGCAGTCCCTCTCCCCACCGCCCAGTACCGGC...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp GAGAGGGCTGAGACCCAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCGGACTGACGGCCCCCTaGAAGCCACTCGGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: ERAETQKAACHNGDHCVSGLTAP*KPLGSP
Trigger: AGGACTCCCGAGTGGCTTCCAGGGGGCCGTCAGTCC...GCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGTCTCAGCCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp GAGAGGGCTGAGACCCAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCGTGACACCCTGGGAGTaGGATGCGGGGGCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: ERAETQKAACHNGDHCVSVTPWE*DAGAGE
Trigger: CTCTCCTGCCCCCGCATCCCACTCCCAGGGTGTCAC...GCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGTCTCAGCCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp GAGAGGGCTGAGACCCAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCCTGATGGAGTTGGGGTaGGGGGTACAGTCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: ERAETQKAACHNGDHCVSLMELG*GVQSGR
Trigger: CCTCCCGGACTGTACCCCTCACCCCAACTCCATCAG...GCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGTCTCAGCCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp AGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCACCGAGGCCTTTCATaGTCCCGGGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SKKTAVWRLGRELPTSIYHRGLS*SRAEGR
Trigger: CCTGCCCTCGGCCCGGGATCATGAAAGGCCTCGGTG...ATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR TCA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCATGTTGTAGGCGTGCATaGAGTAGCGTGGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPCCRRA*SSVAGC
Trigger: GCAGCCAGCCACGCTACTTCATGCACGCCTACAACA...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR TCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTCAGCCCCTCAGGTACTaGGCTGGCTTCGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPQPLRY*AGFGAQ
Trigger: CTGAGCCCCGAAGCCAGCTCAGTACCTGAGGGGCTG...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTTGGGCGGTCGGGTACTaGTGTCCAGGCTGTCCGACG +
Preference number: 4 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPWAVGY*CPGCPT
Trigger: CGTCGGACAGCCTGGACAGCAGTACCCGACCGCCCA...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp GAGAGGGCTGAGACCCAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTGGACTCCGCTTCACTaGAGGCTGACTCGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: ERAETQKAACHNGDHCVSWTPLH*RLTRRP
Trigger: CGGCCTGCGAGTCAGCCTGCAGTGAAGCGGAGTCCA...GCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGTCTCAGCCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR GCA 90 bp CCAAGGTCACAGACGGCGGCCAAGCTGGAAATGGGCCCCGGAGCAGACCCTTGGACCCAGAAAGCCGCTTaGCACAATGGTGACCACTGT +
Preference number: 4 (lower is better)
Translates to: PRSQTAAKLEMGPGADPWTQKAA*HNGDHC
Trigger: ACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGT...CCAAGGGTCTGCTCCGGGGCCCATTTCCAGCTTGGCCGCCGTCTGTGACCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGTCCCCTACCCCGCCCTaGAGGCCCGGGCCATTGCAG +
Preference number: 4 (lower is better)
Translates to: QVPKAALGLSSSCKQASVSPTPP*RPGPLQ
Trigger: CTGCAATGGCCCGGGCCTGCAGGGCGGGGTAGGGGA...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCAAGGTTGCGCTTGATCTaGGCAATCTTGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPRLRLI*AILGAC
Trigger: GCAGGCCCCCAAGATTGCCCAGATCAAGCGCAACCT...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTTCGGCGGCAGGCCCCTaGCTGTGCCGGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSSAAGP*LCRLCW
Trigger: CCAGCAGAGCCGGCACAGCCAGGGGCCTGCCGCCGA...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCACTGCCGGCTTGGATTTaGCTGGCTTCTTTGGGACCG +
Preference number: 4 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPLPAWI*LASLGP
Trigger: CGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAG...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp GAGAGGGCTGAGACCCAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCCTGGGCGGGGGCAGCTaGTTGTTGAGGGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: ERAETQKAACHNGDHCVSLGGGS*LLRGKR
Trigger: CCTCTTTCCCCTCAACAACCAGCTGCCCCCGCCCAG...GCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGTCTCAGCCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp GAGAGGGCTGAGACCCAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCCCAGCGACTGCTGCGTaGCCCTCAGATAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ERAETQKAACHNGDHCVSPATAA*PSDSSG
Trigger: GCCAGAGCTATCTGAGGGCCACGCAGCAGTCGCTGG...GCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGTCTCAGCCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp CGCTGCTTGTCGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGTCCTCCGAGAGGTaGGAACCGTTCCTTCTAGTC +
Preference number: 4 (lower is better)
Translates to: RCLSLASEALSRLTAGLDLSSER*EPFLLV
Trigger: GACTAGAAGGAACGGTTCCCACCTCTCGGAGGACAA...ATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CCA 90 bp CGCTGCTTGTCGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATGCATTCACGAGGTTCTaGTGGGAAGAGGCACACCTT +
Preference number: 4 (lower is better)
Translates to: RCLSLASEALSRLTAGLDAFTRF*WEEAHL
Trigger: AAGGTGTGCCTCTTCCCACCAGAACCTCGTGAATGC...ATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
3UTR CAA 72 bp CGCGGCTCACTGCCGGCTTGGATTTGGCTGGCTTCTTaGGGACCGGAGGGGGTGGTTTCTTCTCTTCCGATG +
Preference number: 4 (lower is better)
Translates to: RGSLPAWIWLAS*GPEGVVSSLPM
Trigger: CATCGGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR TCA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGACGGGGCACCTCCCAGTaGGGCGCCTCCATCTGCGTG +
Preference number: 4 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRRGTSQ*GASICV
Trigger: CACGCAGATGGAGGCGCCTCACTGGGAGGTGCCCCG...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp CACTGCCGGCTTGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTGGGGACGCTGCTTTCTaGGGAGGGTGCCATCACATC +
Preference number: 4 (lower is better)
Translates to: HCRLGFGWLLWDRRGWFLGDAAF*GGCHHI
Trigger: GATGTGATGGCACCCTCCTCAGAAAGCAGCGTCCCC...AAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR GCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTGGGGTCTCCACCAGCTaGCAGCTGTTGGCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPGVSTS*QLLALR
Trigger: CCTCAAGGCCAACAGCTGGCAGCTGGTGGAGACCCC...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp CACTGCCGGCTTGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTCTTGTCGCGGCTCACTaGCGGCTTGGATTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HCRLGFGWLLWDRRGWFLLVAAH*RLGFGW
Trigger: CCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAG...AAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR GCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTCCTGGCAGGGTGTTCTaGCCGGGGAAGCGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSPGRVF*PGKRAS
Trigger: CGAGGCCCGCTTCCCCGGGCAGAACACCCTGCCAGG...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR GCA 90 bp AGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTGCGGGGGTTGCTCTaGTCTCCCAGCGACTGCTGC +
Preference number: 4 (lower is better)
Translates to: SKKTAVWRLGRELPTSIYLRGLL*SPSDCC
Trigger: GCAGCAGTCGCTGGGAGAGCAGAGCAACCCCCGCAG...ATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR GCA 90 bp AGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATGCAGGCCCGGGCCATTaGAGCTCAGGGCTCGTGACA +
Preference number: 4 (lower is better)
Translates to: SKKTAVWRLGRELPTSIYAGPGH*SSGLVT
Trigger: TGTCACGAGCCCTGAGCTGCAATGGCCCGGGCCTGC...ATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp GCTTGTCGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGGAGTCATTGGCATCCTaGGTATCCGAGTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: ACRWRLRPCRGSLPAWIWESLAS*VSESVS
Trigger: GGACACAGACTCGGATACCCAGGATGCCAATGACTC...CCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CCA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCATTTGGCTGGCTTCTTTaGGACCGGAGGGGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPFGWLL*DRRGWF
Trigger: AAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAA...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp AGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATGGCGCTGCTTGTCGCTaGCGTCTGAGGCCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: SKKTAVWRLGRELPTSIYGAACR*RLRPCR
Trigger: GCGACAAGGCCTCAGACGCCAGCGACAAGCAGCGCC...ATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGCTCTTGCGGGCCTCCTaGCGCTGCTTGTCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: QVPKAALGLSSSCKQASVLLRAS*RCLSLA
Trigger: CGCCAGCGACAAGCAGCGCCAGGAGGCCCGCAAGAG...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp GAGAGGGCTGAGACCCAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCCATGGTCTCAGAGCCTaGTCTGGGCCTCCGGGACAT +
Preference number: 4 (lower is better)
Translates to: ERAETQKAACHNGDHCVSHGLRA*SGPPGH
Trigger: ATGTCCCGGAGGCCCAGACCAGGCTCTGAGACCATG...GCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGTCTCAGCCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp TTGTCGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGCTTGGGACCGGAGGGGGTaGTTTCTTCTCTTCCGATGT +
Preference number: 4 (lower is better)
Translates to: LSLASEALSRLTAGLDLAWDRRG*FLLFRC
Trigger: ACATCGGAAGAGAAGAAACCACCCCCTCCGGTCCCA...AGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CCA 90 bp CGCTGCTTGTCGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTCACGAGGTTCTGGTaGGAAGAGGCACACCTTCTT +
Preference number: 4 (lower is better)
Translates to: RCLSLASEALSRLTAGLDFTRFW*EEAHLL
Trigger: AAGAAGGTGTGCCTCTTCCCACCAGAACCTCGTGAA...ATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAGCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR TCA 90 bp AGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATTGCGCTCTCGGTGGCTaGGTTCTGCCGCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: SKKTAVWRLGRELPTSIYCALGG*VLPHRS
Trigger: GCTTCTGTGCGGCAGAACTCAGCCACCGAGAGCGCA...ATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTGGGGACGCTGCTTTCTaGGGAGGGTGCCATCACATC +
Preference number: 4 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPGDAAF*GGCHHI
Trigger: GATGTGATGGCACCCTCCTCAGAAAGCAGCGTCCCC...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR GCA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGTGGCTGTGCCGGCTCTaGTGGGGAGCTGGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: QVPKAALGLSSSCKQASVWLCRL*WGAGGG
Trigger: ACCTCCTCCAGCTCCCCAGCAGAGCCGGCACAGCCA...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTCCGCCAGGAGTCTCTTaGGGGCCTCCTGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSPPGVS*GPPGAA
Trigger: AGCAGCGCCAGGAGGCCCGCAAGAGACTCCTGGCGG...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTCTGCCGCACAGAAGCTaGCCGCTTGGCCGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSLPHRS*PLGRQE
Trigger: CTCCTGGCGGCCAAGCGGGCAGCTTCTGTGCGGCAG...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTCTGGTCACTCAGCTCTaGCTCCCGTACCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPLVTQL*LPYLLL
Trigger: GAGCAGCAGGTACGGGAGGCAGAGCTGAGTGACCAG...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR GCA 90 bp AGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATGAGGGACATGGCAGGTaGCCAAGGCTGCCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SKKTAVWRLGRELPTSIYEGHGR*PRLPLD
Trigger: GTCCAAGGGCAGCCTTGGGCACCTGCCATGTCCCTC...ATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp AGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATGCGGTGAGTGAGTCCTaGCTGACACTGCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SKKTAVWRLGRELPTSIYAVSES*LTLPRA
Trigger: AGCCCTGGGCAGTGTCAGGCAGGACTCACTCACCGC...ATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp GCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTCTCTTCCGATGTGGGCAGCCCTCTCTCTCAGAGCTaGTGGGCCCAGAGTTCTACT +
Preference number: 4 (lower is better)
Translates to: AGFFGTGGGGFFSSDVGSPLSQS*WAQSST
Trigger: AGTAGAACTCTGGGCCCAGCAGCTCTGAGAGAGAGG...GCTGCCCACATCGGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CCA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCAGGCTCTTATCCAAGGTaGCTGAGGTCTTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPGSYPR*LRSSGR
Trigger: TCTGCCAGAAGACCTCAGCCACCTTGGATAAGAGCC...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR TCA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGTGGCGGGCAGCCGGTTaGTCTTGGTGGCTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: QVPKAALGLSSSCKQASVWRAAG*SWWLGH
Trigger: ATGCCCAAGCCACCAAGATCAACCGGCTGCCCGCCA...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR TCA 90 bp AGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATAACCGCAGAGAGGGCTaGGACCCAGAAAGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: SKKTAVWRLGRELPTSIYNRREG*DPESRL
Trigger: CAAGCGGCTTTCTGGGTCTCAGCCCTCTCTGCGGTT...ATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCAAGTCCTAGATTTTGCTaGAGGAAGAAGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPSPRFC*RKKGLE
Trigger: CTCCAGCCCCTTCTTCCTTCAGCAAAATCTAGGACT...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCGGCGCGGCTGAGGACTaGCGGCCCCCTGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITGAAED*RPPGSH
Trigger: GTGGCTTCCAGGGGGCCGTCAGTCCTCAGCCGCGCC...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp GCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTCTCTTCCGATGTGGGCAGCTCAGGGTTCAAGTTTTaGTCACAGAGGCCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: AGFFGTGGGGFFSSDVGSSGFKF*SQRPRN
Trigger: GTTCCGGGGCCTCTGTGAGCAAAACTTGAACCCTGA...GCTGCCCACATCGGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR GCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCTTGGGACAGGGGCTCTaGCACCGCCCGGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITLGQGL*HRPGAT
Trigger: GGTGGCCCCCGGGCGGTGGCAGAGCCCCTGTCCCAA...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR GCA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGAGTAGCGTGGCTGGCTaGGTTCTGCCTGGCGGCCTA +
Preference number: 4 (lower is better)
Translates to: QVPKAALGLSSSCKQASVSSVAG*VLPGGL
Trigger: TAGGCCGCCAGGCAGAACGCAGCCAGCCACGCTACT...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR GCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTGGGACAGCAGCGTGGTaGTCCACTCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSGTAAW*STRRRR
Trigger: GCGGCGGCGGCGAGTGGAGCACCACGCTGCTGTCCC...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCGAGCCAGGGGTCGGGTaGGGGCAGCGAGGACGCCTC +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITEPGVG*GQRGRL
Trigger: GAGGCGTCCTCGCTGCCCCCACCCGACCCCTGGCTC...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTGAGCCAGGGGTCGGGTaGGGGCAGCGAGGACGCCTC +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSEPGVG*GQRGRL
Trigger: GAGGCGTCCTCGCTGCCCCCACCCGACCCCTGGCTC...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGACTGTGCCGGCTCTGCTaGGGAGCTGGAGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRLCRLC*GAGGGL
Trigger: GAGACCTCCTCCAGCTCCCCAGCAGAGCCGGCACAG...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTTCGGCGGCAGGCCCCTaGCTGTGCCGGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSSAAGP*LCRLCW
Trigger: CCAGCAGAGCCGGCACAGCCAGGGGCCTGCCGCCGA...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGCTGGCTTCTTTCTGTGGGGCGTGGGTTaGCATCAGGGTTCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: ASEALSRLTAGLDLAGFFLWGVG*HQGSSF
Trigger: AAAACTTGAACCCTGATGCCAACCCACGCCCCACAG...AAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CCA 90 bp GAGAGGGCTGAGACCCAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCGGCTCACTGCCGGCTTaGATTTGGCTGGCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: ERAETQKAACHNGDHCVSGSLPA*IWLASL
Trigger: CAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCC...GCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGTCTCAGCCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGATGCGGGCGGGGGTGGTaGGGCAGTCAGCTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRCGRGW*GSQLSS
Trigger: ACTACTGAGCTGACTGCCCCACCACCCCCGCCCGCA...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGACCGCAGTATGGAGGCTaGGCCGGGAGTTGCCGACGT +
Preference number: 4 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRPQYGG*AGSCRR
Trigger: ACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGG...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp AGTGTGAGTTCTCATCAGATAGAACGAGTAAAAAGACCGCAGTATGGAGGCTGGCAGCGGCGGCGGCGCTaGGTGGGCATGGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SVSSHQIERVKRPQYGGWQRRRR*VGMGEQ
Trigger: CTGCTCACCCATGCCCACCCAGCGCCGCCGCCGCTG...CCAGCCTCCATACTGCGGTCTTTTTACTCGTTCTATCTGATGAGAACTCACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
3UTR CAA 72 bp AGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTaGCCGACGTCCATCTATCTAGTCCACCACGGCCAG +
Preference number: 4 (lower is better)
Translates to: SKKTAVWRLGRE*PTSIYLVHHGQ
Trigger: CTGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339266.9
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTCAGTCGTCCTCTACCTaGACCCCGATGGACTGGAAT +
Preference number: 4 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPQSSST*TPMDWN
Trigger: ATTCCAGTCCATCGGGGTTCAGGTAGAGGACGACTG...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475894.5
CDS-3UTR TCA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGACTGATGGAGTTGGGGTaGGGGGTACAGTCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRLMELG*GVQSGR
Trigger: CCTCCCGGACTGTACCCCTCACCCCAACTCCATCAG...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTGACCGGCATCGATGCTaGTGGAGTTGGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSDRHRC*WSWGEG
Trigger: CCCCTCACCCCAACTCCATCAGCATCGATGCCGGTC...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTGCCAGCTGTTGGCCTTaGGGTGGTAGAGTTCATCGA +
Preference number: 4 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPASCWP*GGRVHR
Trigger: TCGATGAACTCTACCACCTCAAGGCCAACAGCTGGC...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp GGCTTGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTCTCTTCCGCCAGCTGTTGGCCTTaGGGTGGTAGAGTTCATCGA +
Preference number: 4 (lower is better)
Translates to: GLDLAGFFGTGGGGFFSSASCWP*GGRVHR
Trigger: TCGATGAACTCTACCACCTCAAGGCCAACAGCTGGC...GGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR TCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCACGCCGCGGTCTTGGGTaGGGGCTTGGGGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIARRGLG*GLGAAA
Trigger: GGCGGCAGCCCCAAGCCCTCACCCAAGACCGCGGCG...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR TCA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGACGCTTCACTGCAGGCTaGCTCGCAGGCCGCCTCATA +
Preference number: 4 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRRFTAG*LAGRLI
Trigger: TATGAGGCGGCCTGCGAGTCAGCCTGCAGTGAAGCG...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR TCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAGGACACAGGCGCGGCTaGGGACTGACGGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRGHRRG*GLTAPW
Trigger: CCAGGGGGCCGTCAGTCCTCAGCCGCGCCTGTGTCC...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp GCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTCTCTTCCGATGTGGGCAGCAAGCAAGTCCAGGCCTaGTTCGGTAAGAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: AGFFGTGGGGFFSSDVGSKQVQA*FGKRKV
Trigger: CACTTTCCTCTTACCGAATCAGGCCTGGACTTGCTT...GCTGCCCACATCGGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR TCA 90 bp CGCTGCTTGTCGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATACAGGACTAACTCACTaGGGATTTCAGGAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: RCLSLASEALSRLTAGLDTGLTH*GFQERN
Trigger: ATTCCTTTCCTGAAATCCTCAGTGAGTTAGTCCTGT...ATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAGCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR GCA 90 bp GCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGCTGGCTTCTTTTCGTTTCTTTCCTCCTaGATGGTCTCAGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ASEALSRLTAGLDLAGFFSFLSS*MVSEPG
Trigger: ACCAGGCTCTGAGACCATGCAGGAGGAAAGAAACGA...AAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR GCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTCATTGCCACCGACCTTaGCCGCTGTGCCCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSHCHRP*PLCPPV
Trigger: CACTGGAGGGCACAGCGGGCAAGGTCGGTGGCAATG...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR GCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTAGATGTTGGAGCGGCTaGGCCGTTTGGGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSRCWSG*AVWAPQ
Trigger: CTGGGGAGCCCAAACGGCGCAGCCGCTCCAACATCT...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR GCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTCAGAGGCTGGGCCACTaGTGCGGAAGGCGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSQRLGH*CGRRRP
Trigger: AGGCCGGCGCCTTCCGCAGCAGTGGCCCAGCCTCTG...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp AGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCAAGTCAAGCGTCTCTaGCGCTGTGGACTCCGCTTC +
Preference number: 4 (lower is better)
Translates to: SKKTAVWRLGRELPTSIYQVKRL*RCGLRF
Trigger: GAAGCGGAGTCCACAGCGGCAGAGACGCTTGACTTG...ATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR GCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTTCCCCTACCCCGCCCTaGAGGCCCGGGCCATTGCAG +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSSPTPP*RPGPLQ
Trigger: CTGCAATGGCCCGGGCCTGCAGGGCGGGGTAGGGGA...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp GGCTTGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTCTCTTCCGGAAGACAACAGGACTaGCCACAGTCAGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GLDLAGFFGTGGGGFFSSGRQQD*PQSGSG
Trigger: TCCAGACCCTGACTGTGGGCAGTCCTGTTGTCTTCC...GGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAGAGCCAGGGGTCGGGTaGGGGCAGCGAGGACGCCTC +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSREPGVG*GQRGRL
Trigger: GAGGCGTCCTCGCTGCCCCCACCCGACCCCTGGCTC...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CACTGCCGGCTTGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTAGGCCCCGGAACTGCTaGAATTTCTGGGACATCAGT +
Preference number: 4 (lower is better)
Translates to: HCRLGFGWLLWDRRGWFLRPRNC*NFWDIS
Trigger: ACTGATGTCCCAGAAATTCCAGCAGTTCCGGGGCCT...AAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGGCTGTCGGAGAGGTaGCGGGGGCGGCTGTCACCG +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSRLSER*RGRLSP
Trigger: CGGTGACAGCCGCCCCCGCCACCTCTCCGACAGCCT...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGAAAGAGGCCATCTCCTaGCAGGGTGTTCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: QVPKAALGLSSSCKQASVKEAIS*QGVLPG
Trigger: CCCGGGCAGAACACCCTGCCAGGAGATGGCCTCTTT...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTGGGTGCGGGCGGGGGTaGTGGGGCAGTCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSGCGRG*WGSQLS
Trigger: ACTGAGCTGACTGCCCCACCACCCCCGCCCGCACCC...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCGTGGGGACAGCAGCGTaGTGCTCCACTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITVGTAA*CSTRRR
Trigger: GCGGCGGCGAGTGGAGCACCACGCTGCTGTCCCCAC...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGAGGGAAAGGAGGGACATaGCAGGTGCCCAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRGKGGT*QVPKAA
Trigger: GGCAGCCTTGGGCACCTGCCATGTCCCTCCTTTCCC...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCAAAAAGGGCAGGAGTCTaGAGTGTGATAACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPKRAGV*SVITVA
Trigger: AGCCACAGTTATCACACTCCAGACTCCTGCCCTTTT...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGAGGCGCTGGGTGGGCATaGGTGAGCAGATGGGCGTTT +
Preference number: 4 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRGAGWA*VSRWAF
Trigger: AAACGCCCATCTGCTCACCCATGCCCACCCAGCGCC...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp TCACTGCCGGCTTGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTCACTGCCCACAGCACTaGGGACTTTTCCTAAGACTT +
Preference number: 4 (lower is better)
Translates to: SLPAWIWLASLGPEGVVSHCPQH*GLFLRL
Trigger: AAGTCTTAGGAAAAGTCCTCAGTGCTGTGGGCAGTG...AGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR TCA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCATTGTATGCGTCAATTTaGAAGTTGGCTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPLYASI*KLAQGL
Trigger: GAGACCCTGAGCCAACTTTCAAATTGACGCATACAA...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCCACCGAGGCCTTTCATaGTCCCGGGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITHRGLS*SRAEGR
Trigger: CCTGCCCTCGGCCCGGGATCATGAAAGGCCTCGGTG...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR TCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTCGCCGCGGTCTTGGGTaGGGGCTTGGGGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVRRGLG*GLGAAA
Trigger: GGCGGCAGCCCCAAGCCCTCACCCAAGACCGCGGCG...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR TCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTCACACAGAGGTCAAGTaGCTTGCCCAAGGTCACAGA +
Preference number: 4 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPHTEVK*LAQGHR
Trigger: TCTGTGACCTTGGGCAAGTCACTTGACCTCTGTGTG...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGACTTGTCGCGGCTCACTaGCGGCTTGGATTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRLVAAH*RLGFGW
Trigger: CCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAG...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCCCGCCAGGAGTCTCTTaGGGGCCTCCTGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITPPGVS*GPPGAA
Trigger: AGCAGCGCCAGGAGGCCCGCAAGAGACTCCTGGCGG...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCCTGCCGCACAGAAGCTaGCCGCTTGGCCGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITLPHRS*PLGRQE
Trigger: CTCCTGGCGGCCAAGCGGGCAGCTTCTGTGCGGCAG...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp GAGAGGGCTGAGACCCAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCGTTTCTTTCCTCCTaGATGGTCTCAGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ERAETQKAACHNGDHCVSSFLSS*MVSEPG
Trigger: ACCAGGCTCTGAGACCATGCAGGAGGAAAGAAACGA...GCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGTCTCAGCCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGACAGCAGGTAGGGGTTaGGGTCGGTCCCTGCAAACA +
Preference number: 4 (lower is better)
Translates to: QVPKAALGLSSSCKQASVTAGRG*GRSLQT
Trigger: TGTTTGCAGGGACCGACCGCAACCCCTACCTGCTGT...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR GCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACCTGGCAGGGTGTTCTaGCCGGGGAAGCGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRPGRVF*PGKRAS
Trigger: CGAGGCCCGCTTCCCCGGGCAGAACACCCTGCCAGG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTTGGCCCTCCGGCCCTTaGCGTCCTCCATGCCACCCT +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSWPSGP*RPPCHP
Trigger: AGGGTGGCATGGAGGACGGCAAGGGCCGGAGGGCCA...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp GGCTTGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTCTCTTCCTGTGGGCAGCGTTATTaGCGACCAGGAATTTGTCCC +
Preference number: 4 (lower is better)
Translates to: GLDLAGFFGTGGGGFFSSCGQRY*RPGICP
Trigger: GGGACAAATTCCTGGTCGGCAATAACGCTGCCCACA...GGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCAGCGGGGACACGGGCTaGAGGACTGGCGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITSGDTG*RTGGWT
Trigger: TGTCCAGCCGCCAGTCCTCCAGCCCGTGTCCCCGCT...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR CCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATTCGGCGGCAGGCCCCTaGCTGTGCCGGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHSAAGP*LCRLCW
Trigger: CCAGCAGAGCCGGCACAGCCAGGGGCCTGCCGCCGA...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCATCGGCGGCAGGCCCCTaGCTGTGCCGGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIASAAGP*LCRLCW
Trigger: CCAGCAGAGCCGGCACAGCCAGGGGCCTGCCGCCGA...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGACTGGGCTGTGGGGCGTaGGTTGGCATCAGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRLGCGA*VGIRVQ
Trigger: TTGAACCCTGATGCCAACCCACGCCCCACAGCCCAG...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp AGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATTGGGACCGGAGGGGGTaGTTTCTTCTCTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SKKTAVWRLGRELPTSIYWDRRG*FLLFLP
Trigger: AGGAAGGAAGAGAAGAAACCACCCCCTCCGGTCCCA...ATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGCTGCCGGCTTGGATTTaGCTGGCTTCTTTGGGACCG +
Preference number: 4 (lower is better)
Translates to: QVPKAALGLSSSCKQASVLPAWI*LASLGP
Trigger: CGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAG...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCACGTCAATTTGAAAGTTaGCTCAGGGTCTCTAGACAG +
Preference number: 4 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPRQFES*LRVSRQ
Trigger: CTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACG...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAAGCGGCTGCGCCGTTTaGGCTCCCCAGCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRSGCAV*APQPWP
Trigger: GGGCCAAGGCTGGGGAGCCCAAACGGCGCAGCCGCT...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTTGGCTGCGTTCTGCCTaGCGGCCTAGTGTCATCAGC +
Preference number: 4 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSWLRSA*RPSVIS
Trigger: GCTGATGACACTAGGCCGCCAGGCAGAACGCAGCCA...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp AGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCGTACCTGCTGCTCATaGCCAAACAACTGGGGGATC +
Preference number: 4 (lower is better)
Translates to: SKKTAVWRLGRELPTSIYRTCCS*PNNWGI
Trigger: GATCCCCCAGTTGTTTGGCCATGAGCAGCAGGTACG...ATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR TCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTCTTGTCGCTGGCGTCTaGGGCCTTGTCGCGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSLVAGV*GLVAAH
Trigger: GTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAG...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCAAACCATAGCAAAGGTTaGGAAAACTCTGTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPNHSKG*ENSVPF
Trigger: GAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTT...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACCTCGTGGGCGTGGCTaGGGGTCAGAGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRPRGRG*GSEWTR
Trigger: CCTGGTCCACTCTGACCCTCAGCCACGCCCACGAGG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR TCA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGCTTATCCAAGGTGGCTaGGGTCTTCTGGCAGACCTC +
Preference number: 4 (lower is better)
Translates to: QVPKAALGLSSSCKQASVLIQGG*GLLADL
Trigger: GAGGTCTGCCAGAAGACCTCAGCCACCTTGGATAAG...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR TCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCACGGGGCACCTCCCAGTaGGGCGCCTCCATCTGCGTG +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIARGTSQ*GASICV
Trigger: CACGCAGATGGAGGCGCCTCACTGGGAGGTGCCCCG...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGGACACAGGCGCGGCTaGGGACTGACGGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKGHRRG*GLTAPW
Trigger: CCAGGGGGCCGTCAGTCCTCAGCCGCGCCTGTGTCC...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTCTGGGTGGGCATGGGTaGGCAGATGGGCGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSLGGHG*ADGRLL
Trigger: TAACAAACGCCCATCTGCTCACCCATGCCCACCCAG...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTTGGGCGGTCGGGTACTaGTGTCCAGGCTGTCCGACG +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSWAVGY*CPGCPT
Trigger: CGTCGGACAGCCTGGACAGCAGTACCCGACCGCCCA...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCTGGCTGTGCCGGCTCTaGTGGGGAGCTGGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITWLCRL*WGAGGG
Trigger: ACCTCCTCCAGCTCCCCAGCAGAGCCGGCACAGCCA...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACGGGCCTCCTGGCGCTaGTTGTCGCTGGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRRASWR*LSLASE
Trigger: CTCAGACGCCAGCGACAAGCAGCGCCAGGAGGCCCG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACCGCCAGGAGTCTCTTaGGGGCCTCCTGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRPPGVS*GPPGAA
Trigger: AGCAGCGCCAGGAGGCCCGCAAGAGACTCCTGGCGG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACTGCCGCACAGAAGCTaGCCGCTTGGCCGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRLPHRS*PLGRQE
Trigger: CTCCTGGCGGCCAAGCGGGCAGCTTCTGTGCGGCAG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGATGCGGGGAAAGGTGCTaGTGGGCGGGGGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRCGERC*WAGAAG
Trigger: ACCAGCTGCCCCCGCCCAGCAGCACCTTTCCCCGCA...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCCGACCTTGCCCGCTGTaGCCTCCAGTGAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITRPCPL*PPVRVP
Trigger: AGGCACCCTCACTGGAGGGCACAGCGGGCAAGGTCG...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCCCTTGGCCCGCTCCTTaGTTTTGGCCCTCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITPWPAP*FWPSGP
Trigger: AGGGCCGGAGGGCCAAAAGCAAGGAGCGGGCCAAGG...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTAAAACTTCCCTCATCTaGTCAGCGGTGAGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPKTSLI*SAVSES
Trigger: GGACTCACTCACCGCTGAGCAGATGAGGGAAGTTTT...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTCACGGGCTGGAGGACTaGCGGCTGGACAGGACGGAA +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSHGLED*RLDRTE
Trigger: TTCCGTCCTGTCCAGCCGCCAGTCCTCCAGCCCGTG...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTGGGAGTCCCGAAGAGTaGGGTCGCCCAGAAAGGGCG +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSGSPEE*GRPERA
Trigger: CGCCCTTTCTGGGCGACCCCACTCTTCGGGACTCCC...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR CCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTGGTGGGACTCAGAGCTaGTCAGCGTCCCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSGGTQS*SASLVH
Trigger: GTGAACAAGGGACGCTGACCAGCTCTGAGTCCCACC...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTAGGTTGCGCTTGATCTaGGCAATCTTGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSRLRLI*AILGAC
Trigger: GCAGGCCCCCAAGATTGCCCAGATCAAGCGCAACCT...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGAGCCAGGGGTCGGGTaGGGGCAGCGAGGACGCCTC +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKEPGVG*GQRGRL
Trigger: GAGGCGTCCTCGCTGCCCCCACCCGACCCCTGGCTC...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCGCTCTGCTGGGGAGCTaGAGGAGGTCTCGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITALLGS*RRSRAR
Trigger: CCTGGCTCGAGACCTCCTCCAGCTCCCCAGCAGAGC...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGATGGGACATCAGTAGCTaGGCACTGCCCACAGCACTG +
Preference number: 4 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRWDISS*ALPTAL
Trigger: CAGTGCTGTGGGCAGTGCCCAGCTACTGATGTCCCA...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCCCAGGTCCTGGGCTGTaGGGCGTGGGTTGGCATCAG +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITPGPGL*GVGWHQ
Trigger: CTGATGCCAACCCACGCCCCACAGCCCAGGACCTGG...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTCCAGGTCCTGGGCTGTaGGGCGTGGGTTGGCATCAG +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSPGPGL*GVGWHQ
Trigger: CTGATGCCAACCCACGCCCCACAGCCCAGGACCTGG...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGTGGGACCGGAGGGGGTaGTTTCTTCTCTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QVPKAALGLSSSCKQASVWDRRG*FLLFLP
Trigger: AGGAAGGAAGAGAAGAAACCACCCCCTCCGGTCCCA...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGGGCTCACTGCCGGCTTaGATTTGGCTGGCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: QVPKAALGLSSSCKQASVGSLPA*IWLASL
Trigger: CAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCC...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTGGCGCTGCTTGTCGCTaGCGTCTGAGGCCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSGAACR*RLRPCR
Trigger: GCGACAAGGCCTCAGACGCCAGCGACAAGCAGCGCC...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACTCTTGCGGGCCTCCTaGCGCTGCTTGTCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRLLRAS*RCLSLA
Trigger: CGCCAGCGACAAGCAGCGCCAGGAGGCCCGCAAGAG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGCTGAAGCCATCACGGTaGATGGGCAGCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: QVPKAALGLSSSCKQASVLKPSR*MGSCFS
Trigger: TGAGAAGCAGCTGCCCATCCACCGTGATGGCTTCAG...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGCCGCGCCGCGGTCTTaGGTGAGGGCTTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKAAPRS*VRAWGC
Trigger: GCAGCCCCAAGCCCTCACCCAAGACCGCGGCGCGGC...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCGCCGGTACTGGGCGGTaGGGAGAGGGACTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVAGTGR*GEGLQG
Trigger: TCCCTGCAGTCCCTCTCCCCACCGCCCAGTACCGGC...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTCCGCAGTATGGAGGCTaGGCCGGGAGTTGCCGACGT +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSPQYGG*AGSCRR
Trigger: ACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGG...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGACATCTCTCTGTCCTCTaGGCCCTCAACCGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRHLSVL*ALNRRE
Trigger: CTCTCTGCGGTTGAGGGCCCAGAGGACAGAGAGATG...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp GATTTAAAATCGTTTCTTTCCTCCTGCATGGTCTCAGAGCCTGGTCTGGGCCTCCACTGGCAGGGAGTCTaGGCTGGTTCTCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: DLKSFLSSCMVSEPGLGLHWQGV*AGSLTG
Trigger: GCCAGTCAGAGAACCAGCCCAGACTCCCTGCCAGTG...GAGGCCCAGACCAGGCTCTGAGACCATGCAGGAGGAAAGAAACGATTTTAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR TCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCCCAGACACAAAGCCATaGGGGCCGGATGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITPDTKP*GPDGGQ
Trigger: CTGACCCCCATCCGGCCCTCATGGCTTTGTGTCTGG...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR TCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTCGGGAGGACATACTGTaGGAGGGGACGCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSREDIL*EGTLLR
Trigger: GCGAAGCAGCGTCCCCTCTCACAGTATGTCCTCCCG...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
CDS-3UTR TCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCGACCGGCATCGATGCTaGTGGAGTTGGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITDRHRC*WSWGEG
Trigger: CCCCTCACCCCAACTCCATCAGCATCGATGCCGGTC...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACTTGTCGCTGGCGTCTaGGGCCTTGTCGCGGCTCAC +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRLVAGV*GLVAAH
Trigger: GTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp GCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTCTCTTCCGATGTGGGCAGCAACCATAGCAAAGGTTaGGAAAACTCTGTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: AGFFGTGGGGFFSSDVGSNHSKG*ENSVPF
Trigger: GAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTT...GCTGCCCACATCGGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR TCA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGGGCAGGATTTGGACTTaGGCAGGCTCTTATCCAAGG +
Preference number: 4 (lower is better)
Translates to: QVPKAALGLSSSCKQASVGRIWT*AGSYPR
Trigger: CCTTGGATAAGAGCCTGCTCAAGTCCAAATCCTGCC...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR TCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCGCGTGCGACTATTGCTaGGGCTGCCGGTACTGGGCG +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVACDYC*GCRYWA
Trigger: CGCCCAGTACCGGCAGCCTCAGCAATAGTCGCACGC...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR TCA 90 bp AGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATAGTCCTAGATTTTGCTaGAGGAAGAAGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SKKTAVWRLGRELPTSIYSPRFC*RKKGLE
Trigger: CTCCAGCCCCTTCTTCCTTCAGCAAAATCTAGGACT...ATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCGCAATCTTGGGGGCCTaGCGGGGACCGGCATCGATG +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVAILGA*RGPASM
Trigger: CATCGATGCCGGTCCCCGGCAGGCCCCCAAGATTGC...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp AGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCGCTCTGTTTCTGCCTaGAGTAGCTTTAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: SKKTAVWRLGRELPTSIYRSVSA*SSFRNQ
Trigger: CTGGTTCCTAAAGCTACTGCAGGCAGAAACAGAGCG...ATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATCGGGCCTCCTGGCGCTaGTTGTCGCTGGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHRASWR*LSLASE
Trigger: CTCAGACGCCAGCGACAAGCAGCGCCAGGAGGCCCG...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCACTGCCGCACAGAAGCTaGCCGCTTGGCCGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIALPHRS*PLGRQE
Trigger: CTCCTGGCGGCCAAGCGGGCAGCTTCTGTGCGGCAG...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCTCGGTGGCTGAGTTCTaGCGCACAGAAGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITSVAEF*RTEAAR
Trigger: GCGGGCAGCTTCTGTGCGGCAGAACTCAGCCACCGA...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp AGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATTCGTTTCTTTCCTCCTaGATGGTCTCAGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SKKTAVWRLGRELPTSIYSFLSS*MVSEPG
Trigger: ACCAGGCTCTGAGACCATGCAGGAGGAAAGAAACGA...ATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGTGCGGGGAAAGGTGCTaGTGGGCGGGGGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKCGERC*WAGAAG
Trigger: ACCAGCTGCCCCCGCCCAGCAGCACCTTTCCCCGCA...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTGAGGGACATGGCAGGTaGCCAAGGCTGCCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSEGHGR*PRLPLD
Trigger: GTCCAAGGGCAGCCTTGGGCACCTGCCATGTCCCTC...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp GATTTAAAATCGTTTCTTTCCTCCTGCATGGTCTCAGAGCCTGGTCTGGGCCTCACTTCCCCTCCGCACTaGTCCATGCTCACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: DLKSFLSSCMVSEPGLGLTSPPH*SMLTFL
Trigger: GAGGAAGGTGAGCATGGAGCAGTGCGGAGGGGAAGT...GAGGCCCAGACCAGGCTCTGAGACCATGCAGGAGGAAAGAAACGATTTTAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR GCA 90 bp GGCTTGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTCTCTTCCCATGAAGAGTGTGCATaGAGCATTCACGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: GLDLAGFFGTGGGGFFSSHEECA*SIHEVL
Trigger: CAGAACCTCGTGAATGCTGCATGCACACTCTTCATG...GGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTGCGTGGAGGGACCGGTaGCGGGGTCTTCTTATACGC +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSAWRDR*RGLLIR
Trigger: GCGTATAAGAAGACCCCGCCACCGGTCCCTCCACGC...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AGTGTGAGTTCTCATCAGATAGAACGAGTAAAAAGACCGCAGTATGGAGGCTGGGCGTGGAGGGACCGGTaGCGGGGTCTTCTTATACGC +
Preference number: 4 (lower is better)
Translates to: SVSSHQIERVKRPQYGGWAWRDR*RGLLIR
Trigger: GCGTATAAGAAGACCCCGCCACCGGTCCCTCCACGC...CCAGCCTCCATACTGCGGTCTTTTTACTCGTTCTATCTGATGAGAACTCACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACACCCCGTGTCACGCTaGGCGGTCGGGTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRHPVSR*AVGYCC
Trigger: ACAGCAGTACCCGACCGCCCAGCGTGACACGGGGTG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GATTTAAAATCGTTTCTTTCCTCCTGCATGGTCTCAGAGCCTGGTCTGGGCCTCGGTGGGACTCAGAGCTaGTCAGCGTCCCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: DLKSFLSSCMVSEPGLGLGGTQS*SASLVH
Trigger: GTGAACAAGGGACGCTGACCAGCTCTGAGTCCCACC...GAGGCCCAGACCAGGCTCTGAGACCATGCAGGAGGAAAGAAACGATTTTAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CCA 90 bp GATTTAAAATCGTTTCTTTCCTCCTGCATGGTCTCAGAGCCTGGTCTGGGCCTCAGGTTGCGCTTGATCTaGGCAATCTTGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: DLKSFLSSCMVSEPGLGLRLRLI*AILGAC
Trigger: GCAGGCCCCCAAGATTGCCCAGATCAAGCGCAACCT...GAGGCCCAGACCAGGCTCTGAGACCATGCAGGAGGAAAGAAACGATTTTAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACTGTGCCGGCTCTGCTaGGGAGCTGGAGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRLCRLC*GAGGGL
Trigger: GAGACCTCCTCCAGCTCCCCAGCAGAGCCGGCACAG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGAGGCCCCGGAACTGCTaGAATTTCTGGGACATCAGT +
Preference number: 4 (lower is better)
Translates to: QVPKAALGLSSSCKQASVRPRNC*NFWDIS
Trigger: ACTGATGTCCCAGAAATTCCAGCAGTTCCGGGGCCT...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCCCAGGTCCTGGGCTGTaGGGCGTGGGTTGGCATCAG +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVPGPGL*GVGWHQ
Trigger: CTGATGCCAACCCACGCCCCACAGCCCAGGACCTGG...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCGGCGCTGCTTGTCGCTaGCGTCTGAGGCCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVGAACR*RLRPCR
Trigger: GCGACAAGGCCTCAGACGCCAGCGACAAGCAGCGCC...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCACTCTTGCGGGCCTCCTaGCGCTGCTTGTCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIALLRAS*RCLSLA
Trigger: CGCCAGCGACAAGCAGCGCCAGGAGGCCCGCAAGAG...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GAGAGGGCTGAGACCCAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCCGTCAATTTGAAAGTTaGCTCAGGGTCTCTAGACAG +
Preference number: 4 (lower is better)
Translates to: ERAETQKAACHNGDHCVSRQFES*LRVSRQ
Trigger: CTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACG...GCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGTCTCAGCCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAAGGCTGTCGGAGAGGTaGCGGGGGCGGCTGTCACCG +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKRLSER*RGRLSP
Trigger: CGGTGACAGCCGCCCCCGCCACCTCTCCGACAGCCT...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTTGGCTTGGGCATGGCTaGGGAAGGGGCTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSWLGHG*GRGSPL
Trigger: CAGAGGAGAGCCCCTTCCCCAGCCATGCCCAAGCCA...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTTCGCCACGGGGAAATTaGAGGGTGCTGAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSSPRGN*RVLKPS
Trigger: TGATGGCTTCAGCACCCTCCAATTTCCCCGTGGCGA...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACATCAGCCCAGAGGCTaGGCCACTGCTGCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRHQPRG*ATAAEG
Trigger: GCCTTCCGCAGCAGTGGCCCAGCCTCTGGGCTGATG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGGGTGCGGGCGGGGGTaGTGGGGCAGTCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKGCGRG*WGSQLS
Trigger: ACTGAGCTGACTGCCCCACCACCCCCGCCCGCACCC...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTGCCCACCCCAAGGCTaGGGCAGGTGGCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVCPPQG*GRWLGV
Trigger: CACCCCCAGCCACCTGCCCCAGCCTTGGGGTGGGCA...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATATGCCCACCCCAAGGCTaGGGCAGGTGGCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITICPPQG*GRWLGV
Trigger: CACCCCCAGCCACCTGCCCCAGCCTTGGGGTGGGCA...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCGTGGCTGAGGTCTTCTaGCAGACCTCGTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITVAEVF*QTSWAW
Trigger: CCACGCCCACGAGGTCTGCCAGAAGACCTCAGCCAC...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGTGGGGACAGCAGCGTaGTGCTCCACTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKVGTAA*CSTRRR
Trigger: GCGGCGGCGAGTGGAGCACCACGCTGCTGTCCCCAC...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCCCAGCGACTGCTGCGTaGCCCTCAGATAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITPATAA*PSDSSG
Trigger: GCCAGAGCTATCTGAGGGCCACGCAGCAGTCGCTGG...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp AGTGTGAGTTCTCATCAGATAGAACGAGTAAAAAGACCGCAGTATGGAGGCTGGGCGTCTCTGCCGCTGTaGACTCCGCTTCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: SVSSHQIERVKRPQYGGWASLPL*TPLHCR
Trigger: CCTGCAGTGAAGCGGAGTCCACAGCGGCAGAGACGC...CCAGCCTCCATACTGCGGTCTTTTTACTCGTTCTATCTGATGAGAACTCACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTGAAGTAGCTGGGCAGTaGCAAGTCAAGCGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSEVAGQ*QVKRLC
Trigger: GCAGAGACGCTTGACTTGCCACTGCCCAGCTACTTC...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCAGCAGCCTGCCTGGATaGCACGCAGGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITSSLPG*HAGSCG
Trigger: GCCACAGCTACCTGCGTGCCATCCAGGCAGGCTGCT...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGCAGCCTGCCTGGATaGCACGCAGGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSSSLPG*HAGSCG
Trigger: GCCACAGCTACCTGCGTGCCATCCAGGCAGGCTGCT...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTAAAAGGGCAGGAGTCTaGAGTGTGATAACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPKRAGV*SVITVA
Trigger: AGCCACAGTTATCACACTCCAGACTCCTGCCCTTTT...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGGCGGCGGCGCTGGGTaGGCATGGGTGAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIGGGAG*AWVSRW
Trigger: CCATCTGCTCACCCATGCCCACCCAGCGCCGCCGCC...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAGGCTGGGCAGATaGGCCCTTAGGAGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRQRLGR*ALRSAG
Trigger: CCCCGCACTCCTAAGGGCCCATCTGCCCAGCCTCTG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCGTGACACCCTGGGAGTaGGATGCGGGGGCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVVTPWE*DAGAGE
Trigger: CTCTCCTGCCCCCGCATCCCACTCCCAGGGTGTCAC...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGGGGCTCGTGACACCCTaGGAGTGGGATGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKGLVTP*EWDAGA
Trigger: TGCCCCCGCATCCCACTCCCAGGGTGTCACGAGCCC...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp GATTTAAAATCGTTTCTTTCCTCCTGCATGGTCTCAGAGCCTGGTCTGGGCCTCCCAGGAATTTGTCCCTaGACTTCCCCTCCGCACTGC +
Preference number: 4 (lower is better)
Translates to: DLKSFLSSCMVSEPGLGLPGICP*TSPPHC
Trigger: GCAGTGCGGAGGGGAAGTCCAGGGACAAATTCCTGG...GAGGCCCAGACCAGGCTCTGAGACCATGCAGGAGGAAAGAAACGATTTTAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCAGACGCCCTGAGCCCTaGCCTAGGCAGCCAGTCATC +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITRRPEP*PRQPVI
Trigger: GATGACTGGCTGCCTAGGCCAGGGCTCAGGGCGTCT...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR TCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACGGGAGGACATACTGTaGGAGGGGACGCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRREDIL*EGTLLR
Trigger: GCGAAGCAGCGTCCCCTCTCACAGTATGTCCTCCCG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
CDS-3UTR TCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCCTGATGGAGTTGGGGTaGGGGGTACAGTCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVLMELG*GVQSGR
Trigger: CCTCCCGGACTGTACCCCTCACCCCAACTCCATCAG...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCGACCGGCATCGATGCTaGTGGAGTTGGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVDRHRC*WSWGEG
Trigger: CCCCTCACCCCAACTCCATCAGCATCGATGCCGGTC...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGATGCGCTCTCGGTGGCTaGGTTCTGCCGCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRCALGG*VLPHRS
Trigger: GCTTCTGTGCGGCAGAACTCAGCCACCGAGAGCGCA...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTGCGCTCTCGGTGGCTaGGTTCTGCCGCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVCALGG*VLPHRS
Trigger: GCTTCTGTGCGGCAGAACTCAGCCACCGAGAGCGCA...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGATGGCGGGCAGCCGGTTaGTCTTGGTGGCTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRWRAAG*SWWLGH
Trigger: ATGCCCAAGCCACCAAGATCAACCGGCTGCCCGCCA...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR TCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATGGAGCTCCACCAGCCTaGGATGTTGGAGCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHGAPPA*DVGAAA
Trigger: CGCAGCCGCTCCAACATCTCAGGCTGGTGGAGCTCC...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR TCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAACCGCAGAGAGGGCTaGGACCCAGAAAGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSNRREG*DPESRL
Trigger: CAAGCGGCTTTCTGGGTCTCAGCCCTCTCTGCGGTT...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGCAGCCCCTCAGGTACTaGGCTGGCTTCGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKQPLRY*AGFGAQ
Trigger: CTGAGCCCCGAAGCCAGCTCAGTACCTGAGGGGCTG...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATTGGCTGTGCCGGCTCTaGTGGGGAGCTGGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHWLCRL*WGAGGG
Trigger: ACCTCCTCCAGCTCCCCAGCAGAGCCGGCACAGCCA...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGTGGCTGTGCCGGCTCTaGTGGGGAGCTGGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKWLCRL*WGAGGG
Trigger: ACCTCCTCCAGCTCCCCAGCAGAGCCGGCACAGCCA...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGATCAGGGTTCAAGTTTTaGTCACAGAGGCCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRSGFKF*SQRPRN
Trigger: GTTCCGGGGCCTCTGTGAGCAAAACTTGAACCCTGA...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTCGGGCCTCCTGGCGCTaGTTGTCGCTGGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVRASWR*LSLASE
Trigger: CTCAGACGCCAGCGACAAGCAGCGCCAGGAGGCCCG...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATACGGGCCTCCTGGCGCTaGTTGTCGCTGGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIRASWR*LSLASE
Trigger: CTCAGACGCCAGCGACAAGCAGCGCCAGGAGGCCCG...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATACCGCCAGGAGTCTCTTaGGGGCCTCCTGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIPPGVS*GPPGAA
Trigger: AGCAGCGCCAGGAGGCCCGCAAGAGACTCCTGGCGG...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTCCGCCAGGAGTCTCTTaGGGGCCTCCTGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVPPGVS*GPPGAA
Trigger: AGCAGCGCCAGGAGGCCCGCAAGAGACTCCTGGCGG...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAACTGCCGCACAGAAGCTaGCCGCTTGGCCGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKLPHRS*PLGRQE
Trigger: CTCCTGGCGGCCAAGCGGGCAGCTTCTGTGCGGCAG...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGGTTGCGGTCGGTCCCTaGAAACAGGGGCTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKVAVGP*KQGLVG
Trigger: CCCCACGAGCCCCTGTTTGCAGGGACCGACCGCAAC...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAGTTGCGGTCGGTCCCTaGAAACAGGGGCTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIAVAVGP*KQGLVG
Trigger: CCCCACGAGCCCCTGTTTGCAGGGACCGACCGCAAC...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATCGACCTTGCCCGCTGTaGCCTCCAGTGAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHRPCPL*PPVRVP
Trigger: AGGCACCCTCACTGGAGGGCACAGCGGGCAAGGTCG...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCCCTTCTTGCTGCCATTaGCACCGACCTTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITPSCCH*HRPCPL
Trigger: CAGCGGGCAAGGTCGGTGGCAATGGCAGCAAGAAGG...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGTGAGGGCTTGGGGCTaGCGCCGGACTCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIVRAWG*RRTRRC
Trigger: ACAGCGACGAGTCCGGCGGCAGCCCCAAGCCCTCAC...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACTCCTGCGAGCAGCCTaGCTGGATGGCACGCAGGTA +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRLLRAA*LDGTQV
Trigger: TACCTGCGTGCCATCCAGGCAGGCTGCTCGCAGGAG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCACACTGTCCTCCTCCTaGGAGCAGCCTGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITTLSSS*EQPAWM
Trigger: CATCCAGGCAGGCTGCTCGCAGGAGGAGGACAGTGT...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTGGAGGACTGGCGGCTaGACAGGACGGAAGCGCGGG +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVWRTGG*TGRKRG
Trigger: CCCGCGCTTCCGTCCTGTCCAGCCGCCAGTCCTCCA...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR CCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGCACCCCGTGTCACGCTaGGCGGTCGGGTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKHPVSR*AVGYCC
Trigger: ACAGCAGTACCCGACCGCCCAGCGTGACACGGGGTG...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGAGAGTCATTGGCATCCTaGGTATCCGAGTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRESLAS*VSESVS
Trigger: GGACACAGACTCGGATACCCAGGATGCCAATGACTC...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATGCTCTGCTGGGGAGCTaGAGGAGGTCTCGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHALLGS*RRSRAR
Trigger: CCTGGCTCGAGACCTCCTCCAGCTCCCCAGCAGAGC...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATCTGTGCCGGCTCTGCTaGGGAGCTGGAGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHLCRLC*GAGGGL
Trigger: GAGACCTCCTCCAGCTCCCCAGCAGAGCCGGCACAG...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTCTGGGCTGTGGGGCGTaGGTTGGCATCAGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSLGCGA*VGIRVQ
Trigger: TTGAACCCTGATGCCAACCCACGCCCCACAGCCCAG...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCACCAGGTCCTGGGCTGTaGGGCGTGGGTTGGCATCAG +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIAPGPGL*GVGWHQ
Trigger: CTGATGCCAACCCACGCCCCACAGCCCAGGACCTGG...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGCCAGGTCCTGGGCTGTaGGGCGTGGGTTGGCATCAG +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKPGPGL*GVGWHQ
Trigger: CTGATGCCAACCCACGCCCCACAGCCCAGGACCTGG...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAACTCTTGCGGGCCTCCTaGCGCTGCTTGTCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKLLRAS*RCLSLA
Trigger: CGCCAGCGACAAGCAGCGCCAGGAGGCCCGCAAGAG...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGATTCTTTCCTCCTGCATaGTCTCAGAGCCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRFFPPA*SQSLVW
Trigger: CCAGACCAGGCTCTGAGACCATGCAGGAGGAAAGAA...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGGCCCCAAGGTTCCTaGCAGAGGGGAGGCACGGGT +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHRPQGS*QRGGTG
Trigger: ACCCGTGCCTCCCCTCTGCCAGGAACCTTGGGGCCT...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGGGCGAAGGCCTCCGTaGGCGACAGCAGGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIGRRPP*ATAGRG
Trigger: ACCCCTACCTGCTGTCGCCCACGGAGGCCTTCGCCC...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATGGGGAAAGGTGCTGCTaGGCGGGGGCAGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHGERCC*AGAAGC
Trigger: ACAACCAGCTGCCCCCGCCCAGCAGCACCTTTCCCC...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCTCTCACCACGGGCCTTaGCCTCGCCACGGGGAAATT +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITSHHGP*PRHGEI
Trigger: AATTTCCCCGTGGCGAGGCCAAGGCCCGTGGTGAGA...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAGGCATCCGTCTCGCGTaGGGACAGCAGCGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIAGIRLA*GQQRGA
Trigger: AGCACCACGCTGCTGTCCCCACGCGAGACGGATGCC...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCGGGAAAGGAGGGACATaGCAGGTGCCCAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVGKGGT*QVPKAA
Trigger: GGCAGCCTTGGGCACCTGCCATGTCCCTCCTTTCCC...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTAGAAAACTCAGAGGCTaGGCAGATGGGCCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSRKLRG*ADGPLG
Trigger: TCCTAAGGGCCCATCTGCCCAGCCTCTGAGTTTTCT...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGGGCTCGTGACACCCTaGGAGTGGGATGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKGLVTP*EWDAGA
Trigger: TGCCCCCGCATCCCACTCCCAGGGTGTCACGAGCCC...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGCAGAAAGGGCGGCTCTaGGGGCTGAAGAGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKQKGRL*GLKSAL
Trigger: CAGAGCGCTCTTCAGCCCTCAGAGCCGCCCTTTCTG...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR TCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAGCAGAGAGGAGCTCCTaGAGTCAGGGAGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRAERSS*SQGAED
Trigger: GTCCTCAGCTCCCTGACTTCAGGAGCTCCTCTCTGC...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR TCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCGGGTGCTCGGAGACCTaGGAGAGAACAAGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITGCSET*ERTRRD
Trigger: GTCTCTCCTTGTTCTCTCTCAGGTCTCCGAGCACCC...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR TCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATCGGGAGGACATACTGTaGGAGGGGACGCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHREDIL*EGTLLR
Trigger: GCGAAGCAGCGTCCCCTCTCACAGTATGTCCTCCCG...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
CDS-3UTR TCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATGACCGGCATCGATGCTaGTGGAGTTGGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHDRHRC*WSWGEG
Trigger: CCCCTCACCCCAACTCCATCAGCATCGATGCCGGTC...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTCTTGTCGCTGGCGTCTaGGGCCTTGTCGCGGCTCAC +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVLVAGV*GLVAAH
Trigger: GTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAG...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATTGCGCTCTCGGTGGCTaGGTTCTGCCGCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHCALGG*VLPHRS
Trigger: GCTTCTGTGCGGCAGAACTCAGCCACCGAGAGCGCA...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTGTGAGGGTGCCTTGGTaGAGAAAAGCCGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSVRVPW*RKAAGL
Trigger: CAGTCCAGCGGCTTTTCTTCACCAAGGCACCCTCAC...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR TCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTGCGTGCGACTATTGCTaGGGCTGCCGGTACTGGGCG +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVACDYC*GCRYWA
Trigger: CGCCCAGTACCGGCAGCCTCAGCAATAGTCGCACGC...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR TCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTCGGGAGGACATACTGTaGGAGGGGACGCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSREDIL*EGTLLS
Trigger: AGAAAGCAGCGTCCCCTCTCACAGTATGTCCTCCCG...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000489701.5
CDS-3UTR GCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATACGGCTTTGAAGTGGTaGGTGGAGGGACCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHTALKW*VEGPVA
Trigger: CGCCACCGGTCCCTCCACGCACCACTTCAAAGCCGT...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTGGGCGGTCGGGTACTaGTGTCCAGGCTGTCCGACG +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVWAVGY*CPGCPT
Trigger: CGTCGGACAGCCTGGACAGCAGTACCCGACCGCCCA...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATATGGGCGGTCGGGTACTaGTGTCCAGGCTGTCCGACG +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIWAVGY*CPGCPT
Trigger: CGTCGGACAGCCTGGACAGCAGTACCCGACCGCCCA...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAATCTTGGGGGCCTaGCGGGGACCGGCATCGATG +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIAILGA*RGPASM
Trigger: CATCGATGCCGGTCCCCGGCAGGCCCCCAAGATTGC...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTGGCTGTGCCGGCTCTaGTGGGGAGCTGGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVWLCRL*WGAGGG
Trigger: ACCTCCTCCAGCTCCCCAGCAGAGCCGGCACAGCCA...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACTTGTCGCGGCTCACTaGCGGCTTGGATTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRLVAAH*RLGFGW
Trigger: CCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATTCGGTGGCTGAGTTCTaGCGCACAGAAGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHSVAEF*RTEAAR
Trigger: GCGGGCAGCTTCTGTGCGGCAGAACTCAGCCACCGA...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTGCACTTGATCAGAGGTaGCGGCAGGAAGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSALDQR*RQEAAW
Trigger: CCAAGCTGCTTCCTGCCGGCACCTCTGATCAAGTGC...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR GCA 90 bp AGTGTGAGTTCTCATCAGATAGAACGAGTAAAAAGACCGCAGTATGGAGGCTGGCCTTGCCGTCCTCCATaGCACCCTTCTTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: SVSSHQIERVKRPQYGGWPCRPP*HPSCCH
Trigger: ATGGCAGCAAGAAGGGTGGCATGGAGGACGGCAAGG...CCAGCCTCCATACTGCGGTCTTTTTACTCGTTCTATCTGATGAGAACTCACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR GCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATGACTCCTGCGGGGGTTaGTCTGCTCTCCCAGCGACT +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHDSCGG*SALPAT
Trigger: AGTCGCTGGGAGAGCAGAGCAACCCCCGCAGGAGTC...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCCTGGTCACTCAGCTCTaGCTCCCGTACCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVLVTQL*LPYLLL
Trigger: GAGCAGCAGGTACGGGAGGCAGAGCTGAGTGACCAG...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGTGGACTCCGCTTCACTaGAGGCTGACTCGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKWTPLH*RLTRRP
Trigger: CGGCCTGCGAGTCAGCCTGCAGTGAAGCGGAGTCCA...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTGCAGGCCCGGGCCATTaGAGCTCAGGGCTCGTGACA +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVAGPGH*SSGLVT
Trigger: TGTCACGAGCCCTGAGCTGCAATGGCCCGGGCCTGC...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAGCCATGAGGGCCGGATaGGGGTCAGAGACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIAAMRAG*GSETQR
Trigger: TCTCTGGGTCTCTGACCCCCATCCGGCCCTCATGGC...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR CCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCTTGCTCAGGCCCGACTaGCTAGTCACCTCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITLLRPD*LVTSLL
Trigger: CAAGAGCGAGGTGACTAGCCAGTCGGGCCTGAGCAA...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATACACCCCGTGTCACGCTaGGCGGTCGGGTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIHPVSR*AVGYCC
Trigger: ACAGCAGTACCCGACCGCCCAGCGTGACACGGGGTG...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCAGGTTGCGCTTGATCTaGGCAATCTTGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITRLRLI*AILGAC
Trigger: GCAGGCCCCCAAGATTGCCCAGATCAAGCGCAACCT...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTGCTCTGCTGGGGAGCTaGAGGAGGTCTCGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVALLGS*RRSRAR
Trigger: CCTGGCTCGAGACCTCCTCCAGCTCCCCAGCAGAGC...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCTCTGCTGGGGAGCTaGAGGAGGTCTCGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIALLGS*RRSRAR
Trigger: CCTGGCTCGAGACCTCCTCCAGCTCCCCAGCAGAGC...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCTGGGACATCAGTAGCTaGGCACTGCCCACAGCACTG +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITWDISS*ALPTAL
Trigger: CAGTGCTGTGGGCAGTGCCCAGCTACTGATGTCCCA...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTTGGGACATCAGTAGCTaGGCACTGCCCACAGCACTG +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSWDISS*ALPTAL
Trigger: CAGTGCTGTGGGCAGTGCCCAGCTACTGATGTCCCA...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACTGGGCTGTGGGGCGTaGGTTGGCATCAGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRLGCGA*VGIRVQ
Trigger: TTGAACCCTGATGCCAACCCACGCCCCACAGCCCAG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTCGGCTTGGATTTGGCTaGCTTCTTTGGGACCGGAGG +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSRLGFG*LLWDRR
Trigger: CCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCG...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCCATGGTCTCAGAGCCTaGTCTGGGCCTCCGGGACAT +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVHGLRA*SGPPGH
Trigger: ATGTCCCGGAGGCCCAGACCAGGCTCTGAGACCATG...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGGGGGCCACCAGGTCCTaGTCACACACAAGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKGATRS*SHTRPQ
Trigger: TTGGGGCCTTGTGTGTGACCAGGACCTGGTGGCCCC...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAACGGCAGGAAGCAGCTTaGGACAGGGGCTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKRQEAA*DRGSAT
Trigger: GGTGGCAGAGCCCCTGTCCCAAGCTGCTTCCTGCCG...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACACTGGACCGAGGGCTaGCACACACATCCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRHWTEG*HTHPSR
Trigger: CCTAGAGGGATGTGTGTGCCAGCCCTCGGTCCAGTG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTCTCAGGAGCGGGCACTaGACCGAGGGCTGGCACACA +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVLRSGH*TEGWHT
Trigger: TGTGTGCCAGCCCTCGGTCCAGTGCCCGCTCCTGAG...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAGCAAACAGGGGCTCGTaGGGTGGGTCTAGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIAANRGS*GGSRLS
Trigger: CGACAGCCTAGACCCACCCCACGAGCCCCTGTTTGC...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGGGGAAAGGTGCTGCTaGGCGGGGGCAGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIGERCC*AGAAGC
Trigger: ACAACCAGCTGCCCCCGCCCAGCAGCACCTTTCCCC...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTGAAGGGGCTCTCCTCTaGCACCTCGAAGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSEGALL*HLEVGV
Trigger: AACTCCCACTTCGAGGTGCCAGAGGAGAGCCCCTTC...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATTGGCTTGGGCATGGCTaGGGAAGGGGCTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHWLGHG*GRGSPL
Trigger: CAGAGGAGAGCCCCTTCCCCAGCCATGCCCAAGCCA...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTCACCACGGGCCTTaGCCTCGCCACGGGGAAATT +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVSHHGP*PRHGEI
Trigger: AATTTCCCCGTGGCGAGGCCAAGGCCCGTGGTGAGA...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTCATCAGCCCAGAGGCTaGGCCACTGCTGCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVHQPRG*ATAAEG
Trigger: GCCTTCCGCAGCAGTGGCCCAGCCTCTGGGCTGATG...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTTCTGGCAGACCTCGTaGGCGTGGCTGAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVFWQTS*AWLRVR
Trigger: TCTGACCCTCAGCCACGCCCACGAGGTCTGCCAGAA...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATGCGTCTCTGCCGCTGTaGACTCCGCTTCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHASLPL*TPLHCR
Trigger: CCTGCAGTGAAGCGGAGTCCACAGCGGCAGAGACGC...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTGGCGGCGGCGCTGGGTaGGCATGGGTGAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFGGGAG*AWVSRW
Trigger: CCATCTGCTCACCCATGCCCACCCAGCGCCGCCGCC...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp GATTTAAAATCGTTTCTTTCCTCCTGCATGGTCTCAGAGCCTGGTCTGGGCCTCTCACATCGATCGCTTTaGGTCCGTTGTCCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: DLKSFLSSCMVSEPGLGLSHRSL*VRCPPR
Trigger: TCTCGGAGGACAACGGACCCAAAGCGATCGATGTGA...GAGGCCCAGACCAGGCTCTGAGACCATGCAGGAGGAAAGAAACGATTTTAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR TCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCCAGTCGTCCTCTACCTaGACCCCGATGGACTGGAAT +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITQSSST*TPMDWN
Trigger: ATTCCAGTCCATCGGGGTTCAGGTAGAGGACGACTG...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
CDS-3UTR TCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCAGGAGAGGTTGCGCTTaGTCTGGGCAATCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVRRGCA*SGQSWG
Trigger: CCCCCAAGATTGCCCAGATCAAGCGCAACCTCTCCT...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAAGGAGAGGTTGCGCTTaGTCTGGGCAATCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRRRGCA*SGQSWG
Trigger: CCCCCAAGATTGCCCAGATCAAGCGCAACCTCTCCT...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAGAAAAGCCGCTGGACTaGGTGGACCAGGTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIAEKPLD*VDQVAD
Trigger: ATCCGCCACCTGGTCCACTCAGTCCAGCGGCTTTTC...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR TCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGGAAAAGCCGCTGGACTaGGTGGACCAGGTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKEKPLD*VDQVAD
Trigger: ATCCGCCACCTGGTCCACTCAGTCCAGCGGCTTTTC...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR TCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTCGCTTCACTGCAGGCTaGCTCGCAGGCCGCCTCATA +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVRFTAG*LAGRLI
Trigger: TATGAGGCGGCCTGCGAGTCAGCCTGCAGTGAAGCG...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR TCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATACTGCTCAGCGGTGAGTaGGTCCTGCCTGACACTGCC +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITILLSGE*VLPDTA
Trigger: GGCAGTGTCAGGCAGGACTCACTCACCGCTGAGCAG...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp CACTGCCGGCTTGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTAGGAATGGATTTGTTTaGCCTAAAGTCCCAAACAAA +
Preference number: 4 (lower is better)
Translates to: HCRLGFGWLLWDRRGWFLRNGFV*PKVPNK
Trigger: TTTGTTTGGGACTTTAGGTCAAACAAATCCATTCCT...AAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR GCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAACGGCTTTGAAGTGGTaGGTGGAGGGACCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKTALKW*VEGPVA
Trigger: CGCCACCGGTCCCTCCACGCACCACTTCAAAGCCGT...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGGGGTCTCCACCAGCTaGCAGCTGTTGGCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIGVSTS*QLLALR
Trigger: CCTCAAGGCCAACAGCTGGCAGCTGGTGGAGACCCC...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTGGGGTCTCCACCAGCTaGCAGCTGTTGGCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVGVSTS*QLLALR
Trigger: CCTCAAGGCCAACAGCTGGCAGCTGGTGGAGACCCC...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATCTTGTCGCGGCTCACTaGCGGCTTGGATTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHLVAAH*RLGFGW
Trigger: CCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAG...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATATCGGTGGCTGAGTTCTaGCGCACAGAAGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITISVAEF*RTEAAR
Trigger: GCGGGCAGCTTCTGTGCGGCAGAACTCAGCCACCGA...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAACAGCAGGTAGGGGTTaGGGTCGGTCCCTGCAAACA +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRTAGRG*GRSLQT
Trigger: TGTTTGCAGGGACCGACCGCAACCCCTACCTGCTGT...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTGGATGCGGGGAAAGGTaGTGCTGGGCGGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFGCGER*CWAGAA
Trigger: AGCTGCCCCCGCCCAGCAGCACCTTTCCCCGCATCC...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATCCTTCTTGCTGCCATTaGCACCGACCTTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHPSCCH*HRPCPL
Trigger: CAGCGGGCAAGGTCGGTGGCAATGGCAGCAAGAAGG...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTTGGCCCTCCGGCCCTTaGCGTCCTCCATGCCACCCT +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFWPSGP*RPPCHP
Trigger: AGGGTGGCATGGAGGACGGCAAGGGCCGGAGGGCCA...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAAGATGTTGGAGCGGCTaGGCCGTTTGGGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKRCWSG*AVWAPQ
Trigger: CTGGGGAGCCCAAACGGCGCAGCCGCTCCAACATCT...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTAGTAGCGTGGCTGGCTaGGTTCTGCCTGGCGGCCTA +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVSSVAG*VLPGGL
Trigger: TAGGCCGCCAGGCAGAACGCAGCCAGCCACGCTACT...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTGTGAGGGCTTGGGGCTaGCGCCGGACTCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFVRAWG*RRTRRC
Trigger: ACAGCGACGAGTCCGGCGGCAGCCCCAAGCCCTCAC...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTGACTCCTGCGGGGGTTaGTCTGCTCTCCCAGCGACT +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVDSCGG*SALPAT
Trigger: AGTCGCTGGGAGAGCAGAGCAACCCCCGCAGGAGTC...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAGCCTCCCGTACCTGCTaGTCATGGCCAAACAACTGG +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRASRTC*SWPNNW
Trigger: CCAGTTGTTTGGCCATGAGCAGCAGGTACGGGAGGC...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGACACTGTCCTCCTCCTaGGAGCAGCCTGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKTLSSS*EQPAWM
Trigger: CATCCAGGCAGGCTGCTCGCAGGAGGAGGACAGTGT...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCGGTGAGTGAGTCCTaGCTGACACTGCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIAVSES*LTLPRA
Trigger: AGCCCTGGGCAGTGTCAGGCAGGACTCACTCACCGC...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTCACACACCCGCCTCCTaGCAGGTGCCCCGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFHTPAS*QVPREP
Trigger: TGGCTCTCGGGGCACCTGGCAGGAGGCGGGTGTGTG...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTGAAGGGGACCCGAGATaGGGAGCGAGGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFEGDPR*GAREGL
Trigger: CAGCCCCTCCCTCGCTCCCCATCTCGGGTCCCCTTC...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR CCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTTGCTCAGGCCCGACTaGCTAGTCACCTCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVLLRPD*LVTSLL
Trigger: CAAGAGCGAGGTGACTAGCCAGTCGGGCCTGAGCAA...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTTACAGCTTGAGTCATTaGCATCCTGGGTATCCGAGT +
Preference number: 4 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSYSLSH*HPGYPS
Trigger: ACTCGGATACCCAGGATGCCAATGACTCAAGCTGTA...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCACTGGGCTGTGGGGCGTaGGTTGGCATCAGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIALGCGA*VGIRVQ
Trigger: TTGAACCCTGATGCCAACCCACGCCCCACAGCCCAG...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTTTTGGCTGGCTTCTTTaGGACCGGAGGGGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSFGWLL*DRRGWF
Trigger: AAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAA...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACGGCTTGGATTTGGCTaGCTTCTTTGGGACCGGAGG +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRRLGFG*LLWDRR
Trigger: CCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGCATGGTCTCAGAGCCTaGTCTGGGCCTCCGGGACAT +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKHGLRA*SGPPGH
Trigger: ATGTCCCGGAGGCCCAGACCAGGCTCTGAGACCATG...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGCACTGGACCGAGGGCTaGCACACACATCCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKHWTEG*HTHPSR
Trigger: CCTAGAGGGATGTGTGTGCCAGCCCTCGGTCCAGTG...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGCAAACAGGGGCTCGTaGGGTGGGTCTAGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKANRGS*GGSRLS
Trigger: CGACAGCCTAGACCCACCCCACGAGCCCCTGTTTGC...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTGGGCGAAGGCCTCCGTaGGCGACAGCAGGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFGRRPP*ATAGRG
Trigger: ACCCCTACCTGCTGTCGCCCACGGAGGCCTTCGCCC...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTCTGGGCGGGGGCAGCTaGTTGTTGAGGGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVLGGGS*LLRGKR
Trigger: CCTCTTTCCCCTCAACAACCAGCTGCCCCCGCCCAG...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTGGGCTCCCCAGCCTTaGCCCGCTCCTTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVWAPQP*PAPCFW
Trigger: CCAAAAGCAAGGAGCGGGCCAAGGCTGGGGAGCCCA...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATATGGGCTCCCCAGCCTTaGCCCGCTCCTTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIWAPQP*PAPCFW
Trigger: CCAAAAGCAAGGAGCGGGCCAAGGCTGGGGAGCCCA...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCATGGCTGCGTTCTGCCTaGCGGCCTAGTGTCATCAGC +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIAWLRSA*RPSVIS
Trigger: GCTGATGACACTAGGCCGCCAGGCAGAACGCAGCCA...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTCAGACCTCGTGGGCGTaGCTGAGGGTCAGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVQTSWA*LRVRVD
Trigger: GTCCACTCTGACCCTCAGCCACGCCCACGAGGTCTG...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATACAGACCTCGTGGGCGTaGCTGAGGGTCAGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIQTSWA*LRVRVD
Trigger: GTCCACTCTGACCCTCAGCCACGCCCACGAGGTCTG...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGTTCTGGCAGACCTCGTaGGCGTGGCTGAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKFWQTS*AWLRVR
Trigger: TCTGACCCTCAGCCACGCCCACGAGGTCTGCCAGAA...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGTGGCTGAGGTCTTCTaGCAGACCTCGTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIVAEVF*QTSWAW
Trigger: CCACGCCCACGAGGTCTGCCAGAAGACCTCAGCCAC...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATCCCAGCTCGGACACTTaGAGGGCAGCAGCATGTCCA +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHPSSDT*RAAACP
Trigger: TGGACATGCTGCTGCCCTCCAAGTGTCCGAGCTGGG...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTCGTACCTGCTGCTCATaGCCAAACAACTGGGGGATC +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSRTCCS*PNNWGI
Trigger: GATCCCCCAGTTGTTTGGCCATGAGCAGCAGGTACG...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGCAGGCCGCCTCATACTaGTCACTCAGCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKQAASY*SLSSAS
Trigger: GGAGGCAGAGCTGAGTGACCAGTATGAGGCGGCCTG...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCAAAAAGACCGCAGTATaGAGGCTGGGCCGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITKKTAV*RLGREL
Trigger: CAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTT...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGCAGAGCGGGGATAGCTaGGGAAAGGAGGGACATGGC +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKQSGDS*GKEGHG
Trigger: GCCATGTCCCTCCTTTCCCCAGCTATCCCCGCTCTG...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATCAGAGCGGGGATAGCTaGGGAAAGGAGGGACATGGC +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHQSGDS*GKEGHG
Trigger: GCCATGTCCCTCCTTTCCCCAGCTATCCCCGCTCTG...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGGCGCTGGGTGGGCATaGGTGAGCAGATGGGCGTTT +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIGAGWA*VSRWAF
Trigger: AAACGCCCATCTGCTCACCCATGCCCACCCAGCGCC...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAGGAGAGGTTGCGCTTaGTCTGGGCAATCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIARRGCA*SGQSWG
Trigger: CCCCCAAGATTGCCCAGATCAAGCGCAACCTCTCCT...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGAGGAGAGGTTGCGCTTaGTCTGGGCAATCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKRRGCA*SGQSWG
Trigger: CCCCCAAGATTGCCCAGATCAAGCGCAACCTCTCCT...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTCTTGTCGCTGGCGTCTaGGGCCTTGTCGCGGCTCAC +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFLVAGV*GLVAAH
Trigger: GTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAG...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATATCCCTCTAGGCACTTaGTCAGAGGTGCCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHIPLGT*SEVPAG
Trigger: TCCTGCCGGCACCTCTGATCAAGTGCCTAGAGGGAT...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR TCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAGAAATTGGAGGGTGCTaGAGCCATCACGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSREIGGC*SHHGGW
Trigger: CCATCCACCGTGATGGCTTCAGCACCCTCCAATTTC...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR TCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCACAGCAGCATGTCCACTaGATCCAGGCGGTCCAGACT +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIAQQHVH*IQAVQT
Trigger: AGTCTGGACCGCCTGGATTCAGTGGACATGCTGCTG...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTGCAATCTTGGGGGCCTaGCGGGGACCGGCATCGATG +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFAILGA*RGPASM
Trigger: CATCGATGCCGGTCCCCGGCAGGCCCCCAAGATTGC...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAACTTGTCGCGGCTCACTaGCGGCTTGGATTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKLVAAH*RLGFGW
Trigger: CCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAG...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATCCATGCCACCCTTCTTaGTGCCATTGCCACCGACCT +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHPCHPS*CHCHRP
Trigger: AGGTCGGTGGCAATGGCAGCAAGAAGGGTGGCATGG...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGCCTTGCCGTCCTCCATaGCACCCTTCTTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKPCRPP*HPSCCH
Trigger: ATGGCAGCAAGAAGGGTGGCATGGAGGACGGCAAGG...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTCTGCGGGGGTTGCTCTaGTCTCCCAGCGACTGCTGC +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFLRGLL*SPSDCC
Trigger: GCAGCAGTCGCTGGGAGAGCAGAGCAACCCCCGCAG...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGATCTGCCTCCCGTACCTaGTGCTCATGGCCAAACAAC +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRSASRT*CSWPNN
Trigger: GTTGTTTGGCCATGAGCAGCAGGTACGGGAGGCAGA...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAGGTGCCCAAGGCTaGCCTTGGACTGTCGTCATC +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIAGAQG*PWTVVI
Trigger: GATGACGACAGTCCAAGGGCAGCCTTGGGCACCTGC...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGCAGGTGCCCAAGGCTaGCCTTGGACTGTCGTCATC +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKAGAQG*PWTVVI
Trigger: GATGACGACAGTCCAAGGGCAGCCTTGGGCACCTGC...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAGGATGTCTCGGATaGCAGAGAGGCGCATACACA +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSRGCLG*QRGAYT
Trigger: TGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCT...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTCTCACGGGGAGCCCTTaGGGAGAGTGGAAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVLTGSP*GEWKVF
Trigger: GAACACCTTCCACTCTCCCCAAGGGCTCCCCGTGAG...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGAGACCCCAGCGACTTaGGGTGCAGAACCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIETPAT*GAEPPK
Trigger: CTTTGGGGGTTCTGCACCCCAAGTCGCTGGGGTCTC...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAAGCTCCCAGTGGATATaGGGAACACCCAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRSSQWI*GTPRRG
Trigger: CCCTCTTCTGGGTGTTCCCCATATCCACTGGGAGCT...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR CCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCCCTAGGAGCTCCCAGTaGATATGGGGAACACCCAGA +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVPRSSQ*IWGTPR
Trigger: TCTGGGTGTTCCCCATATCCACTGGGAGCTCCTAGG...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAAAGACCCCAACTTaGGACCTAGGAGCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSRKTPT*DLGAPS
Trigger: ACTGGGAGCTCCTAGGTCCCAAGTTGGGGTCTTTCT...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR CCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGGCAAGAGGCACAGAGTaGCGAGACCACCGAGACAGA +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKARGTE*RDHRDR
Trigger: TCTGTCTCGGTGGTCTCGCCACTCTGTGCCTCTTGC...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR CCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCATTGCTCAGGCCCGACTaGCTAGTCACCTCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIALLRPD*LVTSLL
Trigger: CAAGAGCGAGGTGACTAGCCAGTCGGGCCTGAGCAA...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTCACCCCGTGTCACGCTaGGCGGTCGGGTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFHPVSR*AVGYCC
Trigger: ACAGCAGTACCCGACCGCCCAGCGTGACACGGGGTG...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATGGTGGGACTCAGAGCTaGTCAGCGTCCCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHGGTQS*SASLVH
Trigger: GTGAACAAGGGACGCTGACCAGCTCTGAGTCCCACC...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTACTGGGCTCCTCTTTTaGCACTGGCTGAATGCAGTC +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSTGLLF*HWLNAV
Trigger: GACTGCATTCAGCCAGTGCCAAAAGAGGAGCCCAGT...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
CDS-3UTR CCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCATGGGACATCAGTAGCTaGGCACTGCCCACAGCACTG +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIAWDISS*ALPTAL
Trigger: CAGTGCTGTGGGCAGTGCCCAGCTACTGATGTCCCA...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCCTGTGGGGCGTGGGTTaGCATCAGGGTTCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITLWGVG*HQGSSF
Trigger: AAAACTTGAACCCTGATGCCAACCCACGCCCCACAG...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAACTGGGCTGTGGGGCGTaGGTTGGCATCAGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKLGCGA*VGIRVQ
Trigger: TTGAACCCTGATGCCAACCCACGCCCCACAGCCCAG...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGATGGGACCGGAGGGGGTaGTTTCTTCTCTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRWDRRG*FLLFLP
Trigger: AGGAAGGAAGAGAAGAAACCACCCCCTCCGGTCCCA...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGATTTGGCTGGCTTCTTTaGGACCGGAGGGGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRFGWLL*DRRGWF
Trigger: AAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAA...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGCTGCCGGCTTGGATTTaGCTGGCTTCTTTGGGACCG +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKLPAWI*LASLGP
Trigger: CGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAG...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCGGCTCACTGCCGGCTTaGATTTGGCTGGCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVGSLPA*IWLASL
Trigger: CAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCC...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCTTCTTTCCTCCTGCATaGTCTCAGAGCCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITFFPPA*SQSLVW
Trigger: CCAGACCAGGCTCTGAGACCATGCAGGAGGAAAGAA...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAAAAGAGGCCATCTCCTaGCAGGGTGTTCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIKEAIS*QGVLPG
Trigger: CCCGGGCAGAACACCCTGCCAGGAGATGGCCTCTTT...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAACCAGCCTGAGATGTTaGAGCGGCTGCGCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITITSLRC*SGCAVW
Trigger: CCAAACGGCGCAGCCGCTCCAACATCTCAGGCTGGT...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAGTGCATGAAGTAGCGTaGCTGGCTGCGTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIAVHEVA*LAAFCL
Trigger: CAGGCAGAACGCAGCCAGCCACGCTACTTCATGCAC...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTTGCGGGCGGGGGTGGTaGGGCAGTCAGCTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFCGRGW*GSQLSS
Trigger: ACTACTGAGCTGACTGCCCCACCACCCCCGCCCGCA...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCGCCTGTCCAAAAATCTaGCTGATGCAGCTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITACPKI*LMQLES
Trigger: CGACTCCAGCTGCATCAGCCAGATTTTTGGACAGGC...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGATCATGGCCAAACAACTaGGGGATCAGGGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRSWPNN*GIREAC
Trigger: ACAGGCCTCCCTGATCCCCCAGTTGTTTGGCCATGA...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTCAGGCCGCCTCATACTaGTCACTCAGCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVQAASY*SLSSAS
Trigger: GGAGGCAGAGCTGAGTGACCAGTATGAGGCGGCCTG...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp AGTGTGAGTTCTCATCAGATAGAACGAGTAAAAAGACCGCAGTATGGAGGCTGGTTGTCCTCCGAGAGGTaGGAACCGTTCCTTCTAGTC +
Preference number: 4 (lower is better)
Translates to: SVSSHQIERVKRPQYGGWLSSER*EPFLLV
Trigger: GACTAGAAGGAACGGTTCCCACCTCTCGGAGGACAA...CCAGCCTCCATACTGCGGTCTTTTTACTCGTTCTATCTGATGAGAACTCACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTTCACATCGATCGCTTTaGGTCCGTTGTCCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSSHRSL*VRCPPR
Trigger: TCTCGGAGGACAACGGACCCAAAGCGATCGATGTGA...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000489701.5
CDS-3UTR TCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATCAGTCGTCCTCTACCTaGACCCCGATGGACTGGAAT +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHQSSST*TPMDWN
Trigger: ATTCCAGTCCATCGGGGTTCAGGTAGAGGACGACTG...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
CDS-3UTR TCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTCTGATGGAGTTGGGGTaGGGGGTACAGTCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFLMELG*GVQSGR
Trigger: CCTCCCGGACTGTACCCCTCACCCCAACTCCATCAG...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTCACTGCCCACAGCACTaGGGACTTTTCCTAAGACTT +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSHCPQH*GLFLRL
Trigger: AAGTCTTAGGAAAAGTCCTCAGTGCTGTGGGCAGTG...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATGCCAGCTGTTGGCCTTaGGGTGGTAGAGTTCATCGA +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHASCWP*GGRVHR
Trigger: TCGATGAACTCTACCACCTCAAGGCCAACAGCTGGC...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAGCCAGCTGTTGGCCTTaGGGTGGTAGAGTTCATCGA +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIAASCWP*GGRVHR
Trigger: TCGATGAACTCTACCACCTCAAGGCCAACAGCTGGC...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTAACCATAGCAAAGGTTaGGAAAACTCTGTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSNHSKG*ENSVPF
Trigger: GAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTT...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTGTTGTAGGCGTGCATaGAGTAGCGTGGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVCCRRA*SSVAGC
Trigger: GCAGCCAGCCACGCTACTTCATGCACGCCTACAACA...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR TCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCACTTATCCAAGGTGGCTaGGGTCTTCTGGCAGACCTC +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIALIQGG*GLLADL
Trigger: GAGGTCTGCCAGAAGACCTCAGCCACCTTGGATAAG...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR TCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAACAGCAGCATGTCCACTaGATCCAGGCGGTCCAGACT +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKQQHVH*IQAVQT
Trigger: AGTCTGGACCGCCTGGATTCAGTGGACATGCTGCTG...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR TCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAACTGGGTGGGCATGGGTaGGCAGATGGGCGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKLGGHG*ADGRLL
Trigger: TAACAAACGCCCATCTGCTCACCCATGCCCACCCAG...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCCACACAGAGGTCAAGTaGCTTGCCCAAGGTCACAGA +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVHTEVK*LAQGHR
Trigger: TCTGTGACCTTGGGCAAGTCACTTGACCTCTGTGTG...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTTACAGAGGAGGAAGTTaGGGCACACAGAGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSYRGGS*GTQRSS
Trigger: ACTTGACCTCTGTGTGCCTCAACTTCCTCCTCTGTA...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATACGGGAGGACATACTGTaGGAGGGGACGCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIREDIL*EGTLLS
Trigger: AGAAAGCAGCGTCCCCTCTCACAGTATGTCCTCCCG...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000489701.5
CDS-3UTR GCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTACGGCTTTGAAGTGGTaGGTGGAGGGACCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFTALKW*VEGPVA
Trigger: CGCCACCGGTCCCTCCACGCACCACTTCAAAGCCGT...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTCGCTCTGTTTCTGCCTaGAGTAGCTTTAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSRSVSA*SSFRNQ
Trigger: CTGGTTCCTAAAGCTACTGCAGGCAGAAACAGAGCG...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTCATTGCCACCGACCTTaGCCGCTGTGCCCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFHCHRP*PLCPPV
Trigger: CACTGGAGGGCACAGCGGGCAAGGTCGGTGGCAATG...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTGCCACCCTTCTTGCTaGCATTGCCACCGACCTTGC +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVCHPSC*HCHRPC
Trigger: GCAAGGTCGGTGGCAATGGCAGCAAGAAGGGTGGCA...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAACCATGCCACCCTTCTTaGTGCCATTGCCACCGACCT +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKPCHPS*CHCHRP
Trigger: AGGTCGGTGGCAATGGCAGCAAGAAGGGTGGCATGG...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTGCCTCCCGTACCTGCTaGTCATGGCCAAACAACTGG +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVASRTC*SWPNNW
Trigger: CCAGTTGTTTGGCCATGAGCAGCAGGTACGGGAGGC...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGTCTGCCTCCCGTACCTaGTGCTCATGGCCAAACAAC +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKSASRT*CSWPNN
Trigger: GTTGTTTGGCCATGAGCAGCAGGTACGGGAGGCAGA...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATACAAGTCAAGCGTCTCTaGCGCTGTGGACTCCGCTTC +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIQVKRL*RCGLRF
Trigger: GAAGCGGAGTCCACAGCGGCAGAGACGCTTGACTTG...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCCCTTGGGGAGAGTaGAAGGTGTTCTCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHSPWGE*KVFSRG
Trigger: TCCCCTTGAGAACACCTTCCACTCTCCCCAAGGGCT...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGGTGGGACTCAGAGCTaGTCAGCGTCCCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIGGTQS*SASLVH
Trigger: GTGAACAAGGGACGCTGACCAGCTCTGAGTCCCACC...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAGAGTCATTGGCATCCTaGGTATCCGAGTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRESLAS*VSESVS
Trigger: GGACACAGACTCGGATACCCAGGATGCCAATGACTC...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAATGGGACATCAGTAGCTaGGCACTGCCCACAGCACTG +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKWDISS*ALPTAL
Trigger: CAGTGCTGTGGGCAGTGCCCAGCTACTGATGTCCCA...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAAGGCCCCGGAACTGCTaGAATTTCTGGGACATCAGT +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRRPRNC*NFWDIS
Trigger: ACTGATGTCCCAGAAATTCCAGCAGTTCCGGGGCCT...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACTGTGGGGCGTGGGTTaGCATCAGGGTTCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRLWGVG*HQGSSF
Trigger: AAAACTTGAACCCTGATGCCAACCCACGCCCCACAG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGTTTGGCTGGCTTCTTTaGGACCGGAGGGGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKFGWLL*DRRGWF
Trigger: AAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAA...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATACGGCTTGGATTTGGCTaGCTTCTTTGGGACCGGAGG +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIRLGFG*LLWDRR
Trigger: CCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCG...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAACGGCTTGGATTTGGCTaGCTTCTTTGGGACCGGAGG +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKRLGFG*LLWDRR
Trigger: CCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCG...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATACTGCCGGCTTGGATTTaGCTGGCTTCTTTGGGACCG +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITILPAWI*LASLGP
Trigger: CGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAG...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTGAAGGGGCTCTCCTCTaGCACCTCGAAGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVEGALL*HLEVGV
Trigger: AACTCCCACTTCGAGGTGCCAGAGGAGAGCCCCTTC...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATGTGAAGAAAAGCCGCTaGACTGAGTGGACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHVKKSR*TEWTRW
Trigger: CCACCTGGTCCACTCAGTCCAGCGGCTTTTCTTCAC...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGGTGAAGAAAAGCCGCTaGACTGAGTGGACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKVKKSR*TEWTRW
Trigger: CCACCTGGTCCACTCAGTCCAGCGGCTTTTCTTCAC...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGTGCATGAAGTAGCGTaGCTGGCTGCGTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIVHEVA*LAAFCL
Trigger: CAGGCAGAACGCAGCCAGCCACGCTACTTCATGCAC...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAAAAGACCGCAGTATaGAGGCTGGGCCGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIAKKTAV*RLGREL
Trigger: CAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTT...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR TCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTGCCAGCTGTTGGCCTTaGGGTGGTAGAGTTCATCGA +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVASCWP*GGRVHR
Trigger: TCGATGAACTCTACCACCTCAAGGCCAACAGCTGGC...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGAAATTGGAGGGTGCTaGAGCCATCACGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKEIGGC*SHHGGW
Trigger: CCATCCACCGTGATGGCTTCAGCACCCTCCAATTTC...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR TCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGGGCAGGATTTGGACTTaGGCAGGCTCTTATCCAAGG +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKGRIWT*AGSYPR
Trigger: CCTTGGATAAGAGCCTGCTCAAGTCCAAATCCTGCC...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGAACCCCCAAAGGATGTaGAAGAAACTCACGGGGAGC +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKNPQRM*KKLTGS
Trigger: GCTCCCCGTGAGTTTCTTGCACATCCTTTGGGGGTT...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR GCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCCGCTCTGTTTCTGCCTaGAGTAGCTTTAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVRSVSA*SSFRNQ
Trigger: CTGGTTCCTAAAGCTACTGCAGGCAGAAACAGAGCG...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGACCCAGAAAGCCGCTTaGCACAATGGTGACCACTGT +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKTQKAA*HNGDHC
Trigger: ACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGT...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAAAAACTTCCCTCATCTaGTCAGCGGTGAGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRKTSLI*SAVSES
Trigger: GGACTCACTCACCGCTGAGCAGATGAGGGAAGTTTT...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAACTGGGCTCCTCTTTTaGCACTGGCTGAATGCAGTC +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIATGLLF*HWLNAV
Trigger: GACTGCATTCAGCCAGTGCCAAAAGAGGAGCCCAGT...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
CDS-3UTR CCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGGAGTCATTGGCATCCTaGGTATCCGAGTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKESLAS*VSESVS
Trigger: GGACACAGACTCGGATACCCAGGATGCCAATGACTC...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCACTGTGGGGCGTGGGTTaGCATCAGGGTTCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIALWGVG*HQGSSF
Trigger: AAAACTTGAACCCTGATGCCAACCCACGCCCCACAG...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTCATGGTCTCAGAGCCTaGTCTGGGCCTCCGGGACAT +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFHGLRA*SGPPGH
Trigger: ATGTCCCGGAGGCCCAGACCAGGCTCTGAGACCATG...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATTTCTTTCCTCCTGCATaGTCTCAGAGCCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHFFPPA*SQSLVW
Trigger: CCAGACCAGGCTCTGAGACCATGCAGGAGGAAAGAA...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAACTGAAGCCATCACGGTaGATGGGCAGCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKLKPSR*MGSCFS
Trigger: TGAGAAGCAGCTGCCCATCCACCGTGATGGCTTCAG...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTCGCCACGGGGAAATTaGAGGGTGCTGAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVSPRGN*RVLKPS
Trigger: TGATGGCTTCAGCACCCTCCAATTTCCCCGTGGCGA...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAATCATGGCCAAACAACTaGGGGATCAGGGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKSWPNN*GIREAC
Trigger: ACAGGCCTCCCTGATCCCCCAGTTGTTTGGCCATGA...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGAAAACTCAGAGGCTaGGCAGATGGGCCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHRKLRG*ADGPLG
Trigger: TCCTAAGGGCCCATCTGCCCAGCCTCTGAGTTTTCT...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCATCTTCTCTTCCGATGTaGGCAGCGTTATTGCCGACC +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIASSLPM*AALLPT
Trigger: GGTCGGCAATAACGCTGCCCACATCGGAAGAGAAGA...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR TCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCACACTGCCCACAGCACTaGGGACTTTTCCTAAGACTT +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIAHCPQH*GLFLRL
Trigger: AAGTCTTAGGAAAAGTCCTCAGTGCTGTGGGCAGTG...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGCACTGCCCACAGCACTaGGGACTTTTCCTAAGACTT +
Preference number: 4 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKHCPQH*GLFLRL
Trigger: AAGTCTTAGGAAAAGTCCTCAGTGCTGTGGGCAGTG...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTGTGAGGGTGCCTTGGTaGAGAAAAGCCGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFVRVPW*RKAAGL
Trigger: CAGTCCAGCGGCTTTTCTTCACCAAGGCACCCTCAC...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAATCAGGGTTCAAGTTTTaGTCACAGAGGCCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKSGFKF*SQRPRN
Trigger: GTTCCGGGGCCTCTGTGAGCAAAACTTGAACCCTGA...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTTGCCACCCTTCTTGCTaGCATTGCCACCGACCTTGC +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFCHPSC*HCHRPC
Trigger: GCAAGGTCGGTGGCAATGGCAGCAAGAAGGGTGGCA...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR GCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTAGAGGATGTCTCGGATaGCAGAGAGGCGCATACACA +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVRGCLG*QRGAYT
Trigger: TGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCT...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTGAGCTGAGGACATATTaGGGGGTCCCAAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVELRTY*GVPRRK
Trigger: CTTTCTCCTTGGGACCCCCCAATATGTCCTCAGCTC...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR CCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTTTGCTCAGGCCCGACTaGCTAGTCACCTCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFLLRPD*LVTSLL
Trigger: CAAGAGCGAGGTGACTAGCCAGTCGGGCCTGAGCAA...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTGGTGGGACTCAGAGCTaGTCAGCGTCCCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFGGTQS*SASLVH
Trigger: GTGAACAAGGGACGCTGACCAGCTCTGAGTCCCACC...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGATACAGCTTGAGTCATTaGCATCCTGGGTATCCGAGT +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRYSLSH*HPGYPS
Trigger: ACTCGGATACCCAGGATGCCAATGACTCAAGCTGTA...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTAGGCCCCGGAACTGCTaGAATTTCTGGGACATCAGT +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVRPRNC*NFWDIS
Trigger: ACTGATGTCCCAGAAATTCCAGCAGTTCCGGGGCCT...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAAGGCCCCGGAACTGCTaGAATTTCTGGGACATCAGT +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIRPRNC*NFWDIS
Trigger: ACTGATGTCCCAGAAATTCCAGCAGTTCCGGGGCCT...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTCTTTCCTCCTGCATaGTCTCAGAGCCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVFFPPA*SQSLVW
Trigger: CCAGACCAGGCTCTGAGACCATGCAGGAGGAAAGAA...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAATTCTTTCCTCCTGCATaGTCTCAGAGCCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKFFPPA*SQSLVW
Trigger: CCAGACCAGGCTCTGAGACCATGCAGGAGGAAAGAA...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTCGTCAATTTGAAAGTTaGCTCAGGGTCTCTAGACAG +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSRQFES*LRVSRQ
Trigger: CTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACG...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCCGTCAATTTGAAAGTTaGCTCAGGGTCTCTAGACAG +
Preference number: 4 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITRQFES*LRVSRQ
Trigger: CTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACG...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCCTGTCCAAAAATCTaGCTGATGCAGCTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIACPKI*LMQLES
Trigger: CGACTCCAGCTGCATCAGCCAGATTTTTGGACAGGC...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTCATCTCTCTGTCCTCTaGGCCCTCAACCGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFHLSVL*ALNRRE
Trigger: CTCTCTGCGGTTGAGGGCCCAGAGGACAGAGAGATG...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAACCTTGTTCCCATCTGTaGGGTAGGGATGACACTGTC +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKPCSHL*GRDDTV
Trigger: GACAGTGTCATCCCTACCCCACAGATGGGAACAAGG...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR TCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGATTGTATTCCTATCGATaGCAGTTTCCTTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRLYSYR*QFPFGG
Trigger: GCCCCCAAAAGGAAACTGTCATCGATAGGAATACAA...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATACACTGCCCACAGCACTaGGGACTTTTCCTAAGACTT +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIHCPQH*GLFLRL
Trigger: AAGTCTTAGGAAAAGTCCTCAGTGCTGTGGGCAGTG...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAACCATAGCAAAGGTTaGGAAAACTCTGTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSNHSKG*ENSVPF
Trigger: GAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTT...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTTGTATGCGTCAATTTaGAAGTTGGCTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVLYASI*KLAQGL
Trigger: GAGACCCTGAGCCAACTTTCAAATTGACGCATACAA...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTACAGAGGAGGAAGTTaGGGCACACAGAGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVYRGGS*GTQRSS
Trigger: ACTTGACCTCTGTGTGCCTCAACTTCCTCCTCTGTA...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR GCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAAGGCATGATGAACATTaGTTCAAGAGCTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRRHDEH*FKSSRH
Trigger: GTGTCTGGAGCTCTTGAAGCAATGTTCATCATGCCT...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR GCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATACGCTCTGTTTCTGCCTaGAGTAGCTTTAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIRSVSA*SSFRNQ
Trigger: CTGGTTCCTAAAGCTACTGCAGGCAGAAACAGAGCG...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTCGCTCTGTTTCTGCCTaGAGTAGCTTTAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVRSVSA*SSFRNQ
Trigger: CTGGTTCCTAAAGCTACTGCAGGCAGAAACAGAGCG...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATATCGTTTCTTTCCTCCTaGATGGTCTCAGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITISFLSS*MVSEPG
Trigger: ACCAGGCTCTGAGACCATGCAGGAGGAAAGAAACGA...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTCGTTTCTTTCCTCCTaGATGGTCTCAGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVSFLSS*MVSEPG
Trigger: ACCAGGCTCTGAGACCATGCAGGAGGAAAGAAACGA...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATTACAGCTTGAGTCATTaGCATCCTGGGTATCCGAGT +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHYSLSH*HPGYPS
Trigger: ACTCGGATACCCAGGATGCCAATGACTCAAGCTGTA...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCATACAGCTTGAGTCATTaGCATCCTGGGTATCCGAGT +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIAYSLSH*HPGYPS
Trigger: ACTCGGATACCCAGGATGCCAATGACTCAAGCTGTA...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTGGCTCACTGCCGGCTTaGATTTGGCTGGCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFGSLPA*IWLASL
Trigger: CAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCC...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTGAAGTAGCTGGGCAGTaGCAAGTCAAGCGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFEVAGQ*QVKRLC
Trigger: GCAGAGACGCTTGACTTGCCACTGCCCAGCTACTTC...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAGCATGGGTGAGCAGATaGGCGTTTGTTAACTATACA +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRAWVSR*AFVNYT
Trigger: TGTATAGTTAACAAACGCCCATCTGCTCACCCATGC...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAACACCTTCTTCCCAATaGAAGACAACAGGACTGCCC +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKTPSSQ*KTTGLP
Trigger: GGGCAGTCCTGTTGTCTTCCATTGGGAAGAAGGTGT...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR TCA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGATCTTTTGGCACTGGCTaGATGCAGTCAACTTGTATT +
Preference number: 4 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRSFGTG*MQSTCI
Trigger: AATACAAGTTGACTGCATTCAGCCAGTGCCAAAAGA...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
CDS-3UTR TCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCATTGTATGCGTCAATTTaGAAGTTGGCTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIALYASI*KLAQGL
Trigger: GAGACCCTGAGCCAACTTTCAAATTGACGCATACAA...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTTCAGGGTTCAAGTTTTaGTCACAGAGGCCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFSGFKF*SQRPRN
Trigger: GTTCCGGGGCCTCTGTGAGCAAAACTTGAACCCTGA...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTACTGGGCTCCTCTTTTaGCACTGGCTGAATGCAGTC +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFTGLLF*HWLNAV
Trigger: GACTGCATTCAGCCAGTGCCAAAAGAGGAGCCCAGT...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
CDS-3UTR CCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTCTGTGGGGCGTGGGTTaGCATCAGGGTTCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFLWGVG*HQGSSF
Trigger: AAAACTTGAACCCTGATGCCAACCCACGCCCCACAG...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTGGCTCTTATCCAAGGTaGCTGAGGTCTTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFGSYPR*LRSSGR
Trigger: TCTGCCAGAAGACCTCAGCCACCTTGGATAAGAGCC...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAATCACTCCTCATTTCTaGTACAGACACAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKITPHF*YRHNWA
Trigger: GGCCCAGTTGTGTCTGTACCAGAAATGAGGAGTGAT...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR TCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAACCATAGCAAAGGTTaGGAAAACTCTGTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHNHSKG*ENSVPF
Trigger: GAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTT...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAATTGTATGCGTCAATTTaGAAGTTGGCTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKLYASI*KLAQGL
Trigger: GAGACCCTGAGCCAACTTTCAAATTGACGCATACAA...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTGTATGCGTCAATTTaGAAGTTGGCTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVLYASI*KLAQGL
Trigger: GAGACCCTGAGCCAACTTTCAAATTGACGCATACAA...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR GCA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATTTGGCACTGGCTGAATaGAGTCAACTTGTATTCCTA +
Preference number: 4 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHLALAE*SQLVFL
Trigger: TAGGAATACAAGTTGACTGCATTCAGCCAGTGCCAA...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
CDS-3UTR GCA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCATTGGCACTGGCTGAATaGAGTCAACTTGTATTCCTA +
Preference number: 4 (lower is better)
Translates to: VCVNLKVGSGSLDRITIALALAE*SQLVFL
Trigger: TAGGAATACAAGTTGACTGCATTCAGCCAGTGCCAA...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
CDS-3UTR CCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATACGTCAATTTGAAAGTTaGCTCAGGGTCTCTAGACAG +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIRQFES*LRVSRQ
Trigger: CTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACG...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR TCA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAATCTTTTGGCACTGGCTaGATGCAGTCAACTTGTATT +
Preference number: 4 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKSFGTG*MQSTCI
Trigger: AATACAAGTTGACTGCATTCAGCCAGTGCCAAAAGA...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
CDS-3UTR TCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATATCTTTTGGCACTGGCTaGATGCAGTCAACTTGTATT +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITISFGTG*MQSTCI
Trigger: AATACAAGTTGACTGCATTCAGCCAGTGCCAAAAGA...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
CDS-3UTR GCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATATTGGCACTGGCTGAATaGAGTCAACTTGTATTCCTA +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITILALAE*SQLVFL
Trigger: TAGGAATACAAGTTGACTGCATTCAGCCAGTGCCAA...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
CDS-3UTR CCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTTACAGCTTGAGTCATTaGCATCCTGGGTATCCGAGT +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFYSLSH*HPGYPS
Trigger: ACTCGGATACCCAGGATGCCAATGACTCAAGCTGTA...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CCA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTGATGAACCTGTTGTATaGCCCCAGTTTCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFDEPVV*PQFPPC
Trigger: ACAAGGAGGAAACTGGGGCCATACAACAGGTTCATC...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR GCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATATGTGATTACATAGGTTaGATTGCAGAAGCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITICDYIG*IAEAKA
Trigger: AGCCTTAGCTTCTGCAATGCAACCTATGTAATCACA...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR GCA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAACATGTAAAAATATATaGTATTCACACACCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LVCVNLKVGSGSLDRITITCKNI*YSHTRL
Trigger: GAGGCGGGTGTGTGAATAGCATATATTTTTACATGT...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS CCA 90 bp CGGGGAGAGACAAAGCGGGCGGAGCGGGGACACGGGCTGGAGGACTaGCGGCTGGACAGGACGGAAGCGCGGGCGGGCGGGCGGGCGGGC +
Preference number: 5 (lower is better)
Translates to: RGETKRAERGHGLED*RLDRTEARAGGRAG
Trigger: GCCCGCCCGCCCGCCCGCCCGCGCTTCCGTCCTGTCCAGCCGCCAGTCCTCCAGCCCGTGTCCCCGCTCCGCCCGCTTTGTCTCTCCCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS CCA 90 bp GCGCCGGCACGGGATAGGGCCCTCGGCCGCGGCATCCGTCTCGCGTaGGGACAGCAGCGTGGTGCTCCACTCGCCGCCGCCGCCGGGCAC +
Preference number: 5 (lower is better)
Translates to: APARDRALGRGIRLA*GQQRGAPLAAAAGH
Trigger: GTGCCCGGCGGCGGCGGCGAGTGGAGCACCACGCTGCTGTCCCCACGCGAGACGGATGCCGCGGCCGAGGGCCCTATCCCGTGCCGGCGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 90 bp CAGCGAGCCGGGGAGAGACAAAGCGGGCGGAGCGGGGACACGGGCTaGAGGACTGGCGGCTGGACAGGACGGAAGCGCGGGCGGGCGGGC +
Preference number: 5 (lower is better)
Translates to: QRAGERQSGRSGDTG*RTGGWTGRKRGRAG
Trigger: GCCCGCCCGCCCGCGCTTCCGTCCTGTCCAGCCGCCAGTCCTCCAGCCCGTGTCCCCGCTCCGCCCGCTTTGTCTCTCCCCGGCTCGCTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS GCA 90 bp GGCCCTCGGCCGCGGCATCCGTCTCGCGTGGGGACAGCAGCGTGGTaGTCCACTCGCCGCCGCCGCCGGGCACCTGCAGGTAATGGTAGG +
Preference number: 5 (lower is better)
Translates to: GPRPRHPSRVGTAAW*STRRRRRAPAGNGR
Trigger: CCTACCATTACCTGCAGGTGCCCGGCGGCGGCGGCGAGTGGAGCACCACGCTGCTGTCCCCACGCGAGACGGATGCCGCGGCCGAGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS TCA 90 bp GGCTGTCGGAGAGGTGGCGGGGGCGGCTGTCACCGAGGCCTTTCATaGTCCCGGGCCGAGGGCAGGGGCCTTCACCCTAGCAGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: GCRRGGGGGCHRGLS*SRAEGRGLHPSRAP
Trigger: GGGCGCCCTGCTAGGGTGAAGGCCCCTGCCCTCGGCCCGGGATCATGAAAGGCCTCGGTGACAGCCGCCCCCGCCACCTCTCCGACAGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS GCA 90 bp GGGCCCTGGGTCCTGGGCCCCTGGCCCAACAGCGTCTATGCTCCATaGTGCTCCTGCCGCCAAGCGGGGCTATGGCCTCCGCACCCGAGC +
Preference number: 5 (lower is better)
Translates to: GPWVLGPWPNSVYAP*CSCRQAGLWPPHPS
Trigger: GCTCGGGTGCGGAGGCCATAGCCCCGCTTGGCGGCAGGAGCAGCATGGAGCATAGACGCTGTTGGGCCAGGGGCCCAGGACCCAGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479951.1
CDS CCA 90 bp CCCTCAGATAGCTCTGGCGCCGCGCCGCGGTCTTGGGTGAGGGCTTaGGGCTGCCGCCGGACTCGTCGCTGTCCTCGTCGCCCATGGCCT +
Preference number: 5 (lower is better)
Translates to: PSDSSGAAPRSWVRA*GCRRTRRCPRRPWP
Trigger: AGGCCATGGGCGACGAGGACAGCGACGAGTCCGGCGGCAGCCCCAAGCCCTCACCCAAGACCGCGGCGCGGCGCCAGAGCTATCTGAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 90 bp ACTGCTGCGTGGCCCTCAGATAGCTCTGGCGCCGCGCCGCGGTCTTaGGTGAGGGCTTGGGGCTGCCGCCGGACTCGTCGCTGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: TAAWPSDSSGAAPRS*VRAWGCRRTRRCPR
Trigger: ACGAGGACAGCGACGAGTCCGGCGGCAGCCCCAAGCCCTCACCCAAGACCGCGGCGCGGCGCCAGAGCTATCTGAGGGCCACGCAGCAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 90 bp CCAGACTCCTGCGGGGGTTGCTCTGCTCTCCCAGCGACTGCTGCGTaGCCCTCAGATAGCTCTGGCGCCGCGCCGCGGTCTTGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: PDSCGGCSALPATAA*PSDSSGAAPRSWVR
Trigger: CCTCACCCAAGACCGCGGCGCGGCGCCAGAGCTATCTGAGGGCCACGCAGCAGTCGCTGGGAGAGCAGAGCAACCCCCGCAGGAGTCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS GCA 90 bp CTGCCTGGCGGCCTAGTGTCATCAGCCCAGAGGCTGGGCCACTGCTaGGGAAGGCGCCGGCCTCGCCGTCCAAGTTGTCATCGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LPGGLVSSAQRLGHC*GRRRPRRPSCHRSS
Trigger: GGAGCTCCGATGACAACTTGGACGGCGAGGCCGGCGCCTTCCGCAGCAGTGGCCCAGCCTCTGGGCTGATGACACTAGGCCGCCAGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp ATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCTAGTCCACCACGGCCACGCCGCGCCGCGGTCTaGGGTGAGGGCTTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: MEAGPGVADVHLSSPPRPRRAAV*GEGLGL
Trigger: CAGCCCCAAGCCCTCACCCAAGACCGCGGCGCGGCG...TGGCCGTGGTGGACTAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS GCA 90 bp GTTCTGCCTGGCGGCCTAGTGTCATCAGCCCAGAGGCTGGGCCACTaGTGCGGAAGGCGCCGGCCTCGCCGTCCAAGTTGTCATCGGAGC +
Preference number: 5 (lower is better)
Translates to: VLPGGLVSSAQRLGH*CGRRRPRRPSCHRS
Trigger: GCTCCGATGACAACTTGGACGGCGAGGCCGGCGCCTTCCGCAGCAGTGGCCCAGCCTCTGGGCTGATGACACTAGGCCGCCAGGCAGAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 90 bp CATCGGAGCTCCACCAGCCTGAGATGTTGGAGCGGCTGCGCCGTTTaGGCTCCCCAGCCTTGGCCCGCTCCTTGCTTTTGGCCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: HRSSTSLRCWSGCAV*APQPWPAPCFWPSG
Trigger: GCCGGAGGGCCAAAAGCAAGGAGCGGGCCAAGGCTGGGGAGCCCAAACGGCGCAGCCGCTCCAACATCTCAGGCTGGTGGAGCTCCGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp GCTTGTCGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGGCCTCCTGGCGCTGCTaGTCGCTGGCGTCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: ACRWRLRPCRGSLPAWIWASWRC*SLASEA
Trigger: GGCCTCAGACGCCAGCGACAAGCAGCGCCAGGAGGC...CCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS CCA 90 bp GGGCCCAGCAGGAGTCAGCTCAGGAGCGGGCACTGGACCGAGGGCTaGCACACACATCCCTCTAGGCACTTGATCAGAGGTGCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: GPSRSQLRSGHWTEG*HTHPSRHLIRGAGR
Trigger: CCTGCCGGCACCTCTGATCAAGTGCCTAGAGGGATGTGTGTGCCAGCCCTCGGTCCAGTGCCCGCTCCTGAGCTGACTCCTGCTGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339266.10
ENST00000373913.7
CDS-3UTR CAA 90 bp CCAAGGTCACAGACGGCGGCCAAGCTGGAAATGGGCCCCGGAGCAGACCCTTGGTTGATCTGGGCAATCTaGGGGGCCTGCCGGGGACCG +
Preference number: 5 (lower is better)
Translates to: PRSQTAAKLEMGPGADPWLIWAI*GACRGP
Trigger: CGGTCCCCGGCAGGCCCCCAAGATTGCCCAGATCAA...CCAAGGGTCTGCTCCGGGGCCCATTTCCAGCTTGGCCGCCGTCTGTGACCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS TCA 90 bp GCGGGCACTGGACCGAGGGCTGGCACACACATCCCTCTAGGCACTTaGTCAGAGGTGCCGGCAGGAAGCAGCTTGGGACAGGGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: AGTGPRAGTHIPLGT*SEVPAGSSLGQGLC
Trigger: GCAGAGCCCCTGTCCCAAGCTGCTTCCTGCCGGCACCTCTGATCAAGTGCCTAGAGGGATGTGTGTGCCAGCCCTCGGTCCAGTGCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339266.10
ENST00000373913.7
CDS GCA 90 bp TTTTGGCCCTCCGGCCCTTGCCGTCCTCCATGCCACCCTTCTTGCTaGCATTGCCACCGACCTTGCCCGCTGTGCCCTCCAGTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: FWPSGPCRPPCHPSC*HCHRPCPLCPPVRV
Trigger: CACCCTCACTGGAGGGCACAGCGGGCAAGGTCGGTGGCAATGGCAGCAAGAAGGGTGGCATGGAGGACGGCAAGGGCCGGAGGGCCAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS GCA 90 bp TGCTTTTGGCCCTCCGGCCCTTGCCGTCCTCCATGCCACCCTTCTTaGTGCCATTGCCACCGACCTTGCCCGCTGTGCCCTCCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: CFWPSGPCRPPCHPS*CHCHRPCPLCPPVR
Trigger: CCTCACTGGAGGGCACAGCGGGCAAGGTCGGTGGCAATGGCAGCAAGAAGGGTGGCATGGAGGACGGCAAGGGCCGGAGGGCCAAAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS GCA 90 bp CGACTATTGCTGAGGCTGCCGGTACTGGGCGGTGGGGAGAGGGACTaGAGGGAGACACTGTCCTCCTCCTGCGAGCAGCCTGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: RLLLRLPVLGGGERD*RETLSSSCEQPAWM
Trigger: CATCCAGGCAGGCTGCTCGCAGGAGGAGGACAGTGTCTCCCTGCAGTCCCTCTCCCCACCGCCCAGTACCGGCAGCCTCAGCAATAGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 90 bp ACTCGGAAGCGTGCGACTATTGCTGAGGCTGCCGGTACTGGGCGGTaGGGAGAGGGACTGCAGGGAGACACTGTCCTCCTCCTGCGAGCA +
Preference number: 5 (lower is better)
Translates to: TRKRATIAEAAGTGR*GEGLQGDTVLLLRA
Trigger: TGCTCGCAGGAGGAGGACAGTGTCTCCCTGCAGTCCCTCTCCCCACCGCCCAGTACCGGCAGCCTCAGCAATAGTCGCACGCTTCCGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS TCA 90 bp CAAGTCAAGCGTCTCTGCCGCTGTGGACTCCGCTTCACTGCAGGCTaGCTCGCAGGCCGCCTCATACTGGTCACTCAGCTCTGCCTCCCG +
Preference number: 5 (lower is better)
Translates to: QVKRLCRCGLRFTAG*LAGRLILVTQLCLP
Trigger: CGGGAGGCAGAGCTGAGTGACCAGTATGAGGCGGCCTGCGAGTCAGCCTGCAGTGAAGCGGAGTCCACAGCGGCAGAGACGCTTGACTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTCTGGCGTCTGAGGCCTaGTCGCGGCTCACTGCCGGC +
Preference number: 5 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPLASEA*SRLTAG
Trigger: GCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAG...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS GCA 90 bp GCAGTGGCAAGTCAAGCGTCTCTGCCGCTGTGGACTCCGCTTCACTaGAGGCTGACTCGCAGGCCGCCTCATACTGGTCACTCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: AVASQASLPLWTPLH*RLTRRPPHTGHSAL
Trigger: CAGAGCTGAGTGACCAGTATGAGGCGGCCTGCGAGTCAGCCTGCAGTGAAGCGGAGTCCACAGCGGCAGAGACGCTTGACTTGCCACTGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 90 bp CGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTaGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: RWRLRPCRGSLPAWI*LASLGPEGVVSSLP
Trigger: AGGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339266.10
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000478910.5
CDS CCA 90 bp AGCAGGCTCTTATCCAAGGTGGCTGAGGTCTTCTGGCAGACCTCGTaGGCGTGGCTGAGGGTCAGAGTGGACCAGGAGCCCCGTTTGACG +
Preference number: 5 (lower is better)
Translates to: SRLLSKVAEVFWQTS*AWLRVRVDQEPRLT
Trigger: CGTCAAACGGGGCTCCTGGTCCACTCTGACCCTCAGCCACGCCCACGAGGTCTGCCAGAAGACCTCAGCCACCTTGGATAAGAGCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 90 bp GTGGACTCCGCTTCACTGCAGGCTGACTCGCAGGCCGCCTCATACTaGTCACTCAGCTCTGCCTCCCGTACCTGCTGCTCATGGCCAAAC +
Preference number: 5 (lower is better)
Translates to: VDSASLQADSQAASY*SLSSASRTCCSWPN
Trigger: GTTTGGCCATGAGCAGCAGGTACGGGAGGCAGAGCTGAGTGACCAGTATGAGGCGGCCTGCGAGTCAGCCTGCAGTGAAGCGGAGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 90 bp AGCGGAAGTAGCTGGGCAGTGGCAAGTCAAGCGTCTCTGCCGCTGTaGACTCCGCTTCACTGCAGGCTGACTCGCAGGCCGCCTCATACT +
Preference number: 5 (lower is better)
Translates to: SGSSWAVASQASLPL*TPLHCRLTRRPPHT
Trigger: AGTATGAGGCGGCCTGCGAGTCAGCCTGCAGTGAAGCGGAGTCCACAGCGGCAGAGACGCTTGACTTGCCACTGCCCAGCTACTTCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 90 bp GGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGCTGGCTTCTTTaGGACCGGAGGGGGTGGTTTCTTCTCTTCCGATGTGGGCAGCGT +
Preference number: 5 (lower is better)
Translates to: GLVAAHCRLGFGWLL*DRRGWFLLFRCGQR
Trigger: ACGCTGCCCACATCGGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477195.1
ENST00000489701.5
CDS-3UTR CAA 90 bp GAGAGGGCTGAGACCCAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTTGATCTGGGCAATCTaGGGGGCCTGCCGGGGACCG +
Preference number: 5 (lower is better)
Translates to: ERAETQKAACHNGDHCVSLIWAI*GACRGP
Trigger: CGGTCCCCGGCAGGCCCCCAAGATTGCCCAGATCAA...GCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGTCTCAGCCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CAA 90 bp AGTAAAAAGACCGCAGTATGGAGGCTGGGCCGGGAGTTGCCGACGTCCATCTATCCCCGGAGCAGACCCTaGGTTCACCTGGGGACGGGG +
Preference number: 5 (lower is better)
Translates to: SKKTAVWRLGRELPTSIYPRSRP*VHLGTG
Trigger: CCCCGTCCCCAGGTGAACCAAGGGTCTGCTCCGGGG...ATAGATGGACGTCGGCAACTCCCGGCCCAGCCTCCATACTGCGGTCTTTTTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CAA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGCCCGAGGCTCCGGTTTaGTACGCCCGAGGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: QVPKAALGLSSSCKQASVPEAPV*YARGAG
Trigger: CCCCGCCCCTCGGGCGTACAAAACCGGAGCCTCGGG...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475894.5
CDS TCA 90 bp GGTGTAGTTGAAGCTGGCGGCTGTCTTGAGGCAAAGATCACTCCCTaGACCCTGTGGCAGAAACCTGGAGGGCAGGCCAGAGGCGCCTGC +
Preference number: 5 (lower is better)
Translates to: GVVEAGGCLEAKITP*TLWQKPGGQARGAC
Trigger: GCAGGCGCCTCTGGCCTGCCCTCCAGGTTTCTGCCACAGGGTTCAGGGAGTGATCTTTGCCTCAAGACAGCCGCCAGCTTCAACTACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 90 bp GGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGCTGGCTTCTTTaGGACCGGAGGGGGTGGTTTCTTCTCTTCCTTCCTCTTCTCGGG +
Preference number: 5 (lower is better)
Translates to: GLVAAHCRLGFGWLL*DRRGWFLLFLPLLG
Trigger: CCCGAGAAGAGGAAGGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339266.10
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000478910.5
CDS CCA 90 bp GGGCGAGCCAAATTTCTACCACTCCCCAGCCACTGGCAGGGAGTCTaGGCTGGTTCTCTGACTGGCCCAGGGACAGTTTCCACCAAGACC +
Preference number: 5 (lower is better)
Translates to: GRAKFLPLPSHWQGV*AGSLTGPGTVSTKT
Trigger: GGTCTTGGTGGAAACTGTCCCTGGGCCAGTCAGAGAACCAGCCCAGACTCCCTGCCAGTGGCTGGGGAGTGGTAGAAATTTGGCTCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CAA 90 bp GGCTTGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTCTCTTCCTTGATCTGGGCAATCTaGGGGGCCTGCCGGGGACCG +
Preference number: 5 (lower is better)
Translates to: GLDLAGFFGTGGGGFFSSLIWAI*GACRGP
Trigger: CGGTCCCCGGCAGGCCCCCAAGATTGCCCAGATCAA...GGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CAA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGGCCTCCTGGCGCTGCTaGTCGCTGGCGTCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: QVPKAALGLSSSCKQASVASWRC*SLASEA
Trigger: GGCCTCAGACGCCAGCGACAAGCAGCGCCAGGAGGC...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CAA 90 bp TTGTCGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGCTATCGCTTTGGGTCCGTaGTCCTCCGAGAGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: LSLASEALSRLTAGLDLAIALGP*SSERWE
Trigger: TTCCCACCTCTCGGAGGACAACGGACCCAAAGCGAT...AGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS TCA 90 bp TATACGCCACTAGGCATGATGAACTCGGAAGCGTGCGACTATTGCTaGGGCTGCCGGTACTGGGCGGTGGGGAGAGGGACTGCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: YTPLGMMNSEACDYC*GCRYWAVGRGTAGR
Trigger: TCTCCCTGCAGTCCCTCTCCCCACCGCCCAGTACCGGCAGCCTCAGCAATAGTCGCACGCTTCCGAGTTCATCATGCCTAGTGGCGTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS GCA 90 bp TCCACTCCTGTGAAGTGGAACAGGACAACAGTGATGCCCTGCGCCTaGCTTTCTTCTCTGGGACAAAGGTCCCGGGCCATGGGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: STPVKWNRTTVMPCA*LSSLGQRSRAMGQP
Trigger: TGGCTGCCCCATGGCCCGGGACCTTTGTCCCAGAGAAGAAAGGCAGGCGCAGGGCATCACTGTTGTCCTGTTCCACTTCACAGGAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 90 bp AAACCTGGAGGGCAGGCCAGAGGCGCCTGCACTAAGGGCAAACCCTaGACGGCAGTTCTAGATTCAGAAACTGCCACCCACAGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: KPGGQARGACTKGKP*TAVLDSETATHRSH
Trigger: GTGGCTCCTGTGGGTGGCAGTTTCTGAATCTAGAACTGCCGTCCAGGGTTTGCCCTTAGTGCAGGCGCCTCTGGCCTGCCCTCCAGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 90 bp GCTGGGCCCAGAGTTCTACTAAGCACCCTCAGACGCCCTGAGCCCTaGCCTAGGCAGCCAGTCATCAGAGGGAAAGTAACCCAGCCAGAA +
Preference number: 5 (lower is better)
Translates to: AGPRVLLSTLRRPEP*PRQPVIRGKVTQPE
Trigger: TTCTGGCTGGGTTACTTTCCCTCTGATGACTGGCTGCCTAGGCCAGGGCTCAGGGCGTCTGAGGGTGCTTAGTAGAACTCTGGGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CAA 90 bp GAGAGGGCTGAGACCCAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCCTAGTCACCTCGCTCTaGTGGTCCTGGCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: ERAETQKAACHNGDHCVSLVTSL*WSWLSR
Trigger: CCTGGACAGCCAGGACCACAAGAGCGAGGTGACTAG...GCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGTCTCAGCCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CAA 90 bp GCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGCTGGCTTCTTTGGGACCGGAGCTGGTCAGCGTCCCTaGTTCACTTTTCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: ALSRLTAGLDLAGFFGTGAGQRP*FTFQSC
Trigger: GCAGCTCTGAAAAGTGAACAAGGGACGCTGACCAGC...TCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CAA 90 bp GGCTTGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTCTCTTCCGATGACAGTTTCCTTTaGGGGGCGGCCTCGGGGTGG +
Preference number: 5 (lower is better)
Translates to: GLDLAGFFGTGGGGFFSSDDSFL*GAASGW
Trigger: CCACCCCGAGGCCGCCCCCAAAAGGAAACTGTCATC...GGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CAA 90 bp CGCTGCTTGTCGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTACAGCTTGAGTCATaGGCATCCTGGGTATCCGAG +
Preference number: 5 (lower is better)
Translates to: RCLSLASEALSRLTAGLDLQLES*ASWVSE
Trigger: CTCGGATACCCAGGATGCCAATGACTCAAGCTGTAA...ATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAAGCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CAA 90 bp CCAAGGTCACAGACGGCGGCCAAGCTGGAAATGGGCCCCGGAGCAGACCCTTGGCAGATGACTTACAGCTaGAGTCATTGGCATCCTGGG +
Preference number: 5 (lower is better)
Translates to: PRSQTAAKLEMGPGADPWQMTYS*SHWHPG
Trigger: CCCAGGATGCCAATGACTCAAGCTGTAAGTCATCTG...CCAAGGGTCTGCTCCGGGGCCCATTTCCAGCTTGGCCGCCGTCTGTGACCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CAA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGAGCCTCCTGGCGCTGCTaGTCGCTGGCGTCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRASWRC*SLASEA
Trigger: GGCCTCAGACGCCAGCGACAAGCAGCGCCAGGAGGC...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CAA 90 bp GAGAGGGCTGAGACCCAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCCATGCCACCCTTCTaGCTGCCATTGCCACCGACC +
Preference number: 5 (lower is better)
Translates to: ERAETQKAACHNGDHCVSSMPPF*LPLPPT
Trigger: GGTCGGTGGCAATGGCAGCAAGAAGGGTGGCATGGA...GCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGTCTCAGCCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CAA 90 bp CAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCTGAAGGGAAAAGATTGGCCCTCCGGCCCTaGCCGTCCTCCATGCCACCC +
Preference number: 5 (lower is better)
Translates to: QKAACHNGDHCVSSEGKRLALRP*PSSMPP
Trigger: GGGTGGCATGGAGGACGGCAAGGGCCGGAGGGCCAA...TCTTTTCCCTTCAGAGCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CAA 90 bp TTGTCGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGCTATCACATCGATCGCTTaGGGTCCGTTGTCCTCCGAG +
Preference number: 5 (lower is better)
Translates to: LSLASEALSRLTAGLDLAITSIA*GPLSSE
Trigger: CTCGGAGGACAACGGACCCAAAGCGATCGATGTGAT...AGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS TCA 90 bp CTGGTGGCAGGATTTGGACTTGAGCAGGCTCTTATCCAAGGTGGCTaGGGTCTTCTGGCAGACCTCGTGGGCGTGGCTGAGGGTCAGAGT +
Preference number: 5 (lower is better)
Translates to: LVAGFGLEQALIQGG*GLLADLVGVAEGQS
Trigger: ACTCTGACCCTCAGCCACGCCCACGAGGTCTGCCAGAAGACCTCAGCCACCTTGGATAAGAGCCTGCTCAAGTCCAAATCCTGCCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS TCA 90 bp CCGGCTCAAGGAATGCAGCACCACTGGATCTCCAAGGAGCTGCAATaGGACCAAGAATGGGGCTGGGGTGAATCCAGGGAATGGGACGCC +
Preference number: 5 (lower is better)
Translates to: PAQGMQHHWISKELQ*DQEWGWGESREWDA
Trigger: GGCGTCCCATTCCCTGGATTCACCCCAGCCCCATTCTTGGTCTCATTGCAGCTCCTTGGAGATCCAGTGGTGCTGCATTCCTTGAGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS TCA 90 bp TTCCAGGCCTGTTGGTGGAGAACAATGGTCGGGAAAGAGCCTGGCTaGTTACACAATGCCTCACACAGCCCTCCTCCCTCACGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: FQACWWRTMVGKEPG*LHNASHSPPPSRSP
Trigger: CGGGCTGCGTGAGGGAGGAGGGCTGTGTGAGGCATTGTGTAATCAGCCAGGCTCTTTCCCGACCATTGTTCTCCACCAACAGGCCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482872.5
CDS CCA 90 bp GATTTGGACTTGAGCAGGCTCTTATCCAAGGTGGCTGAGGTCTTCTaGCAGACCTCGTGGGCGTGGCTGAGGGTCAGAGTGGACCAGGAG +
Preference number: 5 (lower is better)
Translates to: DLDLSRLLSKVAEVF*QTSWAWLRVRVDQE
Trigger: CTCCTGGTCCACTCTGACCCTCAGCCACGCCCACGAGGTCTGCCAGAAGACCTCAGCCACCTTGGATAAGAGCCTGCTCAAGTCCAAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTCTAGTCACCTCGCTCTaGTGGTCCTGGCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPLVTSL*WSWLSR
Trigger: CCTGGACAGCCAGGACCACAAGAGCGAGGTGACTAG...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CAA 90 bp CACTGCCGGCTTGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTATTTGGCTGGCTTCTTaGGGACCGGAGGGGGTGGTT +
Preference number: 5 (lower is better)
Translates to: HCRLGFGWLLWDRRGWFLIWLAS*GPEGVV
Trigger: AACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAAT...AAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS GCA 90 bp GCTCCTGCATTCCAGTGCTTTGTTATCAGCTGGGCCACATCCAATTaGTCAGGGGTGGCTGGAGGAGTCCCTTGCAGCCTGTGCCACAAC +
Preference number: 5 (lower is better)
Translates to: APAFQCFVISWATSN*SGVAGGVPCSLCHN
Trigger: GTTGTGGCACAGGCTGCAAGGGACTCCTCCAGCCACCCCTGAGCAATTGGATGTGGCCCAGCTGATAACAAAGCACTGGAATGCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 90 bp CGACTTCCAGGCCTGTTGGTGGAGAACAATGGTCGGGAAAGAGCCTaGCTGATTACACAATGCCTCACACAGCCCTCCTCCCTCACGCAG +
Preference number: 5 (lower is better)
Translates to: RLPGLLVENNGRERA*LITQCLTQPSSLTQ
Trigger: CTGCGTGAGGGAGGAGGGCTGTGTGAGGCATTGTGTAATCAGCCAGGCTCTTTCCCGACCATTGTTCTCCACCAACAGGCCTGGAAGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482872.5
CDS-3UTR CAA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGAGGCTGTCCGACGAGTaGCTCAGGCCCGACTGGCTA +
Preference number: 5 (lower is better)
Translates to: QVPKAALGLSSSCKQASVRLSDE*LRPDWL
Trigger: TAGCCAGTCGGGCCTGAGCAACTCGTCGGACAGCCT...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CAA 90 bp TTGTCGCTGGCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGCTCAGATGACTTACAGCTaGAGTCATTGGCATCCTGGG +
Preference number: 5 (lower is better)
Translates to: LSLASEALSRLTAGLDLAQMTYS*SHWHPG
Trigger: CCCAGGATGCCAATGACTCAAGCTGTAAGTCATCTG...AGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAGCGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CAA 90 bp GAGAGGGCTGAGACCCAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTGCCCAAGGCTGCCCTaGGACTGTCGTCATCTTGTA +
Preference number: 5 (lower is better)
Translates to: ERAETQKAACHNGDHCVSCPRLP*DCRHLV
Trigger: TACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCA...GCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGTCTCAGCCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS TCA 90 bp CCGGTGGCGGGGTCTTCTTATACGCCACTAGGCATGATGAACCTGTaGAACAGGGAGAACTCCACTGGCTTCCGACTTCCAGGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: PVAGSSYTPLGMMNL*NRENSTGFRLPGLL
Trigger: CAACAGGCCTGGAAGTCGGAAGCCAGTGGAGTTCTCCCTGTTTCACAGGTTCATCATGCCTAGTGGCGTATAAGAAGACCCCGCCACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482872.5
CDS GCA 90 bp TGGTGGGAAGAGGCACACCTTCTTCCCAATGGAAGACAACAGGACTaGCCACAGTCAGGGTCTGGACAAAGGACTGACCCTCCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: WWEEAHLLPNGRQQD*PQSGSGQRTDPPAS
Trigger: AGAGGCTGGAGGGTCAGTCCTTTGTCCAGACCCTGACTGTGGGCAGTCCTGTTGTCTTCCATTGGGAAGAAGGTGTGCCTCTTCCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS CCA 90 bp GGAAAGCAGAGAGGAGCTCCTGAAGTCAGGGAGCTGAGGACATATTaGGGGGTCCCAAGGAGAAAGACCCCAACTTGGGACCTAGGAGCT +
Preference number: 5 (lower is better)
Translates to: GKQRGAPEVRELRTY*GVPRRKTPTWDLGA
Trigger: AGCTCCTAGGTCCCAAGTTGGGGTCTTTCTCCTTGGGACCCCCCAATATGTCCTCAGCTCCCTGACTTCAGGAGCTCCTCTCTGCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS CCA 90 bp GTGCTTTGTTATCAGCTGGGCCACATCCAATTGCTCAGGGGTGGCTaGAGGAGTCCCTTGCAGCCTGTGCCACAACACACAATGCCTCGT +
Preference number: 5 (lower is better)
Translates to: VLCYQLGHIQLLRGG*RSPLQPVPQHTMPR
Trigger: ACGAGGCATTGTGTGTTGTGGCACAGGCTGCAAGGGACTCCTCCAGCCACCCCTGAGCAATTGGATGTGGCCCAGCTGATAACAAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 90 bp GGTGCCATCACATCGATCGCTTTGGGTCCGTTGTCCTCCGAGAGGTaGGAACCGTTCCTTCTAGTCCTCTCCTTCACACGCATCAGAGAG +
Preference number: 5 (lower is better)
Translates to: GAITSIALGPLSSER*EPFLLVLSFTRIRE
Trigger: CTCTCTGATGCGTGTGAAGGAGAGGACTAGAAGGAACGGTTCCCACCTCTCGGAGGACAACGGACCCAAAGCGATCGATGTGATGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS-3UTR CAA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTGATGACAGTTTCCTTTaGGGGGCGGCCTCGGGGTGG +
Preference number: 5 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSDDSFL*GAASGW
Trigger: CCACCCCGAGGCCGCCCCCAAAAGGAAACTGTCATC...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CAA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCCTGGCGTCTGAGGCCTaGTCGCGGCTCACTGCCGGC +
Preference number: 5 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITLASEA*SRLTAG
Trigger: GCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAG...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTCTGGCGTCTGAGGCCTaGTCGCGGCTCACTGCCGGC +
Preference number: 5 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSLASEA*SRLTAG
Trigger: GCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAG...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCGCCTCCTGGCGCTGCTaGTCGCTGGCGTCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITASWRC*SLASEA
Trigger: GGCCTCAGACGCCAGCGACAAGCAGCGCCAGGAGGC...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGCTCGCCACGGGGAAATaGGAGGGTGCTGAAGCCATC +
Preference number: 5 (lower is better)
Translates to: QVPKAALGLSSSCKQASVLATGK*EGAEAI
Trigger: GATGGCTTCAGCACCCTCCAATTTCCCCGTGGCGAG...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CAA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAGAGCGGCTGCGCCGTTaGGGCTCCCCAGCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRERLRR*GSPALA
Trigger: GGCCAAGGCTGGGGAGCCCAAACGGCGCAGCCGCTC...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS TCA 90 bp CCTGCAGGTAATGGTAGGCTAGACCCTGGTGGCAGGATTTGGACTTaGGCAGGCTCTTATCCAAGGTGGCTGAGGTCTTCTGGCAGACCT +
Preference number: 5 (lower is better)
Translates to: PAGNGRLDPGGRIWT*AGSYPRWLRSSGRP
Trigger: AGGTCTGCCAGAAGACCTCAGCCACCTTGGATAAGAGCCTGCTCAAGTCCAAATCCTGCCACCAGGGTCTAGCCTACCATTACCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 90 bp GAACATTGCTTCAAGAGCTCCAGACACAAAGCCATGAGGGCCGGATaGGGGTCAGAGACCCAGAGACCCGGCAAAGACAGAAAAAGGGAG +
Preference number: 5 (lower is better)
Translates to: EHCFKSSRHKAMRAG*GSETQRPGKDRKRE
Trigger: CTCCCTTTTTCTGTCTTTGCCGGGTCTCTGGGTCTCTGACCCCCATCCGGCCCTCATGGCTTTGTGTCTGGAGCTCTTGAAGCAATGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS CCA 90 bp TACAGTCCGGGAGGCTCCTCTCAGATGACTTACAGCTTGAGTCATTaGCATCCTGGGTATCCGAGTCTGTGTCCCGTCGGGAGGACATAC +
Preference number: 5 (lower is better)
Translates to: YSPGGSSQMTYSLSH*HPGYPSLCPVGRTY
Trigger: GTATGTCCTCCCGACGGGACACAGACTCGGATACCCAGGATGCCAATGACTCAAGCTGTAAGTCATCTGAGAGGAGCCTCCCGGACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339266.10
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000478910.5
ENST00000479951.1
ENST00000482872.5
ENST00000489701.5
ENST00000495241.5
CDS CCA 90 bp AATCTAGGGCATGAGGCACCAAGGGTTCAGGGCATCCTCAGAAACTaGGGACTCTTCAGTCTCTTGGCCTTGTGGAGAGAAGTAGGGGCC +
Preference number: 5 (lower is better)
Translates to: NLGHEAPRVQGILRN*GLFSLLALWREVGA
Trigger: GGCCCCTACTTCTCTCCACAAGGCCAAGAGACTGAAGAGTCCCCAGTTTCTGAGGATGCCCTGAACCCTTGGTGCCTCATGCCCTAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 90 bp GAACTCCACTGGCTTCCGACTTCCAGGCCTGTTGGTGGAGAACAATaGTCGGGAAAGAGCCTGGCTGATTACACAATGCCTCACACAGCC +
Preference number: 5 (lower is better)
Translates to: ELHWLPTSRPVGGEQ*SGKSLADYTMPHTA
Trigger: GGCTGTGTGAGGCATTGTGTAATCAGCCAGGCTCTTTCCCGACCATTGTTCTCCACCAACAGGCCTGGAAGTCGGAAGCCAGTGGAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482872.5
CDS-3UTR CAA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATGAGCGGCTGCGCCGTTaGGGCTCCCCAGCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHERLRR*GSPALA
Trigger: GGCCAAGGCTGGGGAGCCCAAACGGCGCAGCCGCTC...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTCGCCGCGCCGCGGTCTaGGGTGAGGGCTTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVRRAAV*GEGLGL
Trigger: CAGCCCCAAGCCCTCACCCAAGACCGCGGCGCGGCG...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTTGCAGGCCCGGGCCATaGCAGCTCAGGGCTCGTGAC +
Preference number: 5 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSCRPGP*QLRARD
Trigger: GTCACGAGCCCTGAGCTGCAATGGCCCGGGCCTGCA...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS GCA 90 bp AGGGATGCAGCCACATTTCCCCTCGGCAAAAGCCGGCTCAAGGAATaGAGCACCACTGGATCTCCAAGGAGCTGCAATGAGACCAAGAAT +
Preference number: 5 (lower is better)
Translates to: RDAATFPLGKSRLKE*STTGSPRSCNETKN
Trigger: ATTCTTGGTCTCATTGCAGCTCCTTGGAGATCCAGTGGTGCTGCATTCCTTGAGCCGGCTTTTGCCGAGGGGAAATGTGGCTGCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS GCA 90 bp TCCCATCTGTGGGGTAGGGATGACACTGTCCATGAAGAGTGTGCATaGAGCATTCACGAGGTTCTGGTGGGAAGAGGCACACCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SHLWGRDDTVHEECA*SIHEVLVGRGTPSS
Trigger: GGAAGAAGGTGTGCCTCTTCCCACCAGAACCTCGTGAATGCTGCATGCACACTCTTCATGGACAGTGTCATCCCTACCCCACAGATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS CCA 90 bp GTCTGGTTTGGCCAGCAAGAGGGTGGGGCTGCCCAAAGATATGGGTaGTCAGGACCAAGGGTTGAAGATCAGGCTACTCTCTGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: VWFGQQEGGAAQRYG*SGPRVEDQATLCVS
Trigger: AGAAACACAGAGAGTAGCCTGATCTTCAACCCTTGGTCCTGACCACCCATATCTTTGGGCAGCCCCACCCTCTTGCTGGCCAAACCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 90 bp TACGCCACTAGGCATGATGAACCTGTGAAACAGGGAGAACTCCACTaGCTTCCGACTTCCAGGCCTGTTGGTGGAGAACAATGGTCGGGA +
Preference number: 5 (lower is better)
Translates to: YATRHDEPVKQGELH*LPTSRPVGGEQWSG
Trigger: TCCCGACCATTGTTCTCCACCAACAGGCCTGGAAGTCGGAAGCCAGTGGAGTTCTCCCTGTTTCACAGGTTCATCATGCCTAGTGGCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482872.5
CDS CCA 90 bp AGCATTCACGAGGTTCTGGTGGGAAGAGGCACACCTTCTTCCCAATaGAAGACAACAGGACTGCCCACAGTCAGGGTCTGGACAAAGGAC +
Preference number: 5 (lower is better)
Translates to: SIHEVLVGRGTPSSQ*KTTGLPTVRVWTKD
Trigger: GTCCTTTGTCCAGACCCTGACTGTGGGCAGTCCTGTTGTCTTCCATTGGGAAGAAGGTGTGCCTCTTCCCACCAGAACCTCGTGAATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CAA 90 bp CAAGAGGATGTCTCGGATGCCAGAGAGGCGCATACACAGCATAGAGCAGCCCCTCAGATGACTTACAGCTaGAGTCATTGGCATCCTGGG +
Preference number: 5 (lower is better)
Translates to: QEDVSDAREAHTQHRAAPQMTYS*SHWHPG
Trigger: CCCAGGATGCCAATGACTCAAGCTGTAAGTCATCTG...AGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACATCCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CAA 90 bp GCGTCTGAGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGCTGGCTTCTTTACTTCTTCAGAGAGGTaGTTCTCTTTGGTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ASEALSRLTAGLDLAGFFTSSER*FSLVSL
Trigger: CAAGGAGACCAAAGAGAACAACCTCTCTGAAGAAGT...AAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCTCAGACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CAA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTATTTGGCTGGCTTCTTaGGGACCGGAGGGGGTGGTT +
Preference number: 5 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSIWLAS*GPEGVV
Trigger: AACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAAT...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CAA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTCGGCTCACTGCCGGCTaGGATTTGGCTGGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSRLTAG*DLAGFF
Trigger: AAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCG...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CAA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCACTGGCGTCTGAGGCCTaGTCGCGGCTCACTGCCGGC +
Preference number: 5 (lower is better)
Translates to: VCVNLKVGSGSLDRITIALASEA*SRLTAG
Trigger: GCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAG...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGGCCTCCTGGCGCTGCTaGTCGCTGGCGTCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKASWRC*SLASEA
Trigger: GGCCTCAGACGCCAGCGACAAGCAGCGCCAGGAGGC...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCGGCGGGGGCAGCTGGTaGTTGAGGGGAAAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITGGGSW*LRGKRP
Trigger: TGGCCTCTTTCCCCTCAACAACCAGCTGCCCCCGCC...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp AGTGTGAGTTCTCATCAGATAGAACGAGTAAAAAGACCGCAGTATGGAGGCTGGGGCGGGGGCAGCTGGTaGTTGAGGGGAAAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: SVSSHQIERVKRPQYGGWGGGSW*LRGKRP
Trigger: TGGCCTCTTTCCCCTCAACAACCAGCTGCCCCCGCC...CCAGCCTCCATACTGCGGTCTTTTTACTCGTTCTATCTGATGAGAACTCACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CAA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTCTCTCACCACGGGCCTaGGCCTCGCCACGGGGAAAT +
Preference number: 5 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSLSPRA*ASPRGN
Trigger: ATTTCCCCGTGGCGAGGCCAAGGCCCGTGGTGAGAG...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp CAGGTGCCCAAGGCTGCCCTTGGACTGTCGTCATCTTGTAAACAAGCTAGTGTGCCCTGGTGGCAGGATTaGGACTTGAGCAGGCTCTTA +
Preference number: 5 (lower is better)
Translates to: QVPKAALGLSSSCKQASVPWWQD*DLSRLL
Trigger: TAAGAGCCTGCTCAAGTCCAAATCCTGCCACCAGGG...CACACTAGCTTGTTTACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CAA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATCCCCGGAGCAGACCCTaGGTTCACCTGGGGACGGGG +
Preference number: 5 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHPRSRP*VHLGTG
Trigger: CCCCGTCCCCAGGTGAACCAAGGGTCTGCTCCGGGG...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS GCA 90 bp GTTCCATTCAAGCTCCACTTTGTGTCCCACGCTCCTGCATTCCAGTaGTTTGTTATCAGCTGGGCCACATCCAATTGCTCAGGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: VPFKLHFVSHAPAFQ*FVISWATSNCSGVA
Trigger: AGCCACCCCTGAGCAATTGGATGTGGCCCAGCTGATAACAAAGCACTGGAATGCAGGAGCGTGGGACACAAAGTGGAGCTTGAATGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 90 bp GGTGCCATCACATCGATCGCTTTGGGTCCGTTGTCCTCCGAGAGGTaGGAACCGTTCCTTCTAGTCCTCTCTTGTATTCCTATCGATGAC +
Preference number: 5 (lower is better)
Translates to: GAITSIALGPLSSER*EPFLLVLSCIPIDD
Trigger: GTCATCGATAGGAATACAAGAGAGGACTAGAAGGAACGGTTCCCACCTCTCGGAGGACAACGGACCCAAAGCGATCGATGTGATGGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373913.7
ENST00000482872.5
ENST00000489701.5
ENST00000491207.5
CDS-3UTR CAA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGGCTGTCCGACGAGTaGCTCAGGCCCGACTGGCTA +
Preference number: 5 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSRLSDE*LRPDWL
Trigger: TAGCCAGTCGGGCCTGAGCAACTCGTCGGACAGCCT...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTGATGACAGTTTCCTTTaGGGGGCGGCCTCGGGGTGG +
Preference number: 5 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSDDSFL*GAASGW
Trigger: CCACCCCGAGGCCGCCCCCAAAAGGAAACTGTCATC...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTCTGGCGTCTGAGGCCTaGTCGCGGCTCACTGCCGGC +
Preference number: 5 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVLASEA*SRLTAG
Trigger: GCCGGCAGTGAGCCGCGACAAGGCCTCAGACGCCAG...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp GAGAGGGCTGAGACCCAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCCTTGTATGCGTCAATTaGAAAGTTGGCTCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: ERAETQKAACHNGDHCVSLVCVN*KVGSGS
Trigger: AGACCCTGAGCCAACTTTCAAATTGACGCATACAAG...GCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGTCTCAGCCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CAA 90 bp CACTGCCGGCTTGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTCTTGTATGCGTCAATTaGAAAGTTGGCTCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: HCRLGFGWLLWDRRGWFLLVCVN*KVGSGS
Trigger: AGACCCTGAGCCAACTTTCAAATTGACGCATACAAG...AAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CAA 90 bp AGTGTGAGTTCTCATCAGATAGAACGAGTAAAAAGACCGCAGTATGGAGGCTGGTTGGCGGGCAGCCGGTaGATCTTGGTGGCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: SVSSHQIERVKRPQYGGWLAGSR*ILVAWA
Trigger: TGCCCAAGCCACCAAGATCAACCGGCTGCCCGCCAA...CCAGCCTCCATACTGCGGTCTTTTTACTCGTTCTATCTGATGAGAACTCACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CAA 90 bp AGTGTGAGTTCTCATCAGATAGAACGAGTAAAAAGACCGCAGTATGGAGGCTGGCCCTTCTTGCTGCCATaGCCACCGACCTTGCCCGCT +
Preference number: 5 (lower is better)
Translates to: SVSSHQIERVKRPQYGGWPFLLP*PPTLPA
Trigger: AGCGGGCAAGGTCGGTGGCAATGGCAGCAAGAAGGG...CCAGCCTCCATACTGCGGTCTTTTTACTCGTTCTATCTGATGAGAACTCACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CAA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTGGCCCTCCGGCCCTaGCCGTCCTCCATGCCACCC +
Preference number: 5 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVLALRP*PSSMPP
Trigger: GGGTGGCATGGAGGACGGCAAGGGCCGGAGGGCCAA...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTGCCTTGGCCCGCTCCTaGCTTTTGGCCCTCCGGCCC +
Preference number: 5 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVALARS*LLALRP
Trigger: GGGCCGGAGGGCCAAAAGCAAGGAGCGGGCCAAGGC...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTTTGGGCTCCCCAGCCTaGGCCCGCTCCTTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSLGSPA*ARSLLL
Trigger: CAAAAGCAAGGAGCGGGCCAAGGCTGGGGAGCCCAA...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTCACCAGCCTGAGATGTaGGAGCGGCTGCGCCGTTTG +
Preference number: 5 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSHQPEM*ERLRRL
Trigger: CAAACGGCGCAGCCGCTCCAACATCTCAGGCTGGTG...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp GAGAGGGCTGAGACCCAGAAAGCCGCTTGCCACAATGGTGACCACTGTGTGAGCTCAGTAGTGTTGTTCTaGGTGGTTTTGAGCATGTGC +
Preference number: 5 (lower is better)
Translates to: ERAETQKAACHNGDHCVSSVVLF*VVLSMC
Trigger: GCACATGCTCAAAACCACCAAGAACAACACTACTGA...GCTCACACAGTGGTCACCATTGTGGCAAGCGGCTTTCTGGGTCTCAGCCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CAA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATTGCAGGCCCGGGCCATaGCAGCTCAGGGCTCGTGAC +
Preference number: 5 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHCRPGP*QLRARD
Trigger: GTCACGAGCCCTGAGCTGCAATGGCCCGGGCCTGCA...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS CCA 90 bp ACACTGTCCATGAAGAGTGTGCATGCAGCATTCACGAGGTTCTGGTaGGAAGAGGCACACCTTCTTCCCAATGGAAGACAACAGGACTGC +
Preference number: 5 (lower is better)
Translates to: TLSMKSVHAAFTRFW*EEAHLLPNGRQQDC
Trigger: GCAGTCCTGTTGTCTTCCATTGGGAAGAAGGTGTGCCTCTTCCCACCAGAACCTCGTGAATGCTGCATGCACACTCTTCATGGACAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CAA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTCCGATGGACTGGAATTaGGTAGCGGGACTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSPMDWN*VAGLGS
Trigger: GGAGCCCAGTCCCGCTACCAAATTCCAGTCCATCGG...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
CDS-3UTR CAA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTCCGGCAGGAAGCAGCTaGGGACAGGGGCTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVPAGSS*GQGLCH
Trigger: GTGGCAGAGCCCCTGTCCCAAGCTGCTTCCTGCCGG...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CAA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCGGCAGCCGGTTGATCTaGGTGGCTTGGGCATGGCTG +
Preference number: 5 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVGSRLI*VAWAWL
Trigger: CAGCCATGCCCAAGCCACCAAGATCAACCGGCTGCC...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGATTGGCGGGCAGCCGGTaGATCTTGGTGGCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRLAGSR*ILVAWA
Trigger: TGCCCAAGCCACCAAGATCAACCGGCTGCCCGCCAA...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCCTCGCCACGGGGAAATaGGAGGGTGCTGAAGCCATC +
Preference number: 5 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITLATGK*EGAEAI
Trigger: GATGGCTTCAGCACCCTCCAATTTCCCCGTGGCGAG...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCCCAGCTCGGACACTaGGAGGGCAGCAGCATGTCC +
Preference number: 5 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVSQLGH*EGSSMS
Trigger: GGACATGCTGCTGCCCTCCAAGTGTCCGAGCTGGGA...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGATCCCAGCTCGGACACTaGGAGGGCAGCAGCATGTCC +
Preference number: 5 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRSQLGH*EGSSMS
Trigger: GGACATGCTGCTGCCCTCCAAGTGTCCGAGCTGGGA...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCGGAAGCGTGCGACTATaGCTGAGGCTGCCGGTACTG +
Preference number: 5 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITGSVRL*LRLPVL
Trigger: CAGTACCGGCAGCCTCAGCAATAGTCGCACGCTTCC...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTTGTGTGCGCGTGAGGTaGTGTGTGAGCACTTGGCGG +
Preference number: 5 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSCVRVR*CVSTWR
Trigger: CCGCCAAGTGCTCACACACAACCTCACGCGCACACA...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS TCA 90 bp TCATCACTCAAGAATGAGGGAGAAACCCACACTCAATCTAGGGCATaGGGCACCAAGGGTTCAGGGCATCCTCAGAAACTGGGGACTCTT +
Preference number: 5 (lower is better)
Translates to: SSLKNEGETHTQSRA*GTKGSGHPQKLGTL
Trigger: AAGAGTCCCCAGTTTCTGAGGATGCCCTGAACCCTTGGTGCCTCATGCCCTAGATTGAGTGTGGGTTTCTCCCTCATTCTTGAGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS GCA 90 bp AGCCTTCTCTGTTCCATTCAAGCTCCACTTTGTGTCCCACGCTCCTaGATTCCAGTGCTTTGTTATCAGCTGGGCCACATCCAATTGCTC +
Preference number: 5 (lower is better)
Translates to: SLLCSIQAPLCVPRS*IPVLCYQLGHIQLL
Trigger: GAGCAATTGGATGTGGCCCAGCTGATAACAAAGCACTGGAATGCAGGAGCGTGGGACACAAAGTGGAGCTTGAATGGAACAGAGAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 90 bp ATGACACTGTCCATGAAGAGTGTGCATGCAGCATTCACGAGGTTCTaGTGGGAAGAGGCACACCTTCTTCCCAATGGAAGACAACAGGAC +
Preference number: 5 (lower is better)
Translates to: MTLSMKSVHAAFTRF*WEEAHLLPNGRQQD
Trigger: GTCCTGTTGTCTTCCATTGGGAAGAAGGTGTGCCTCTTCCCACCAGAACCTCGTGAATGCTGCATGCACACTCTTCATGGACAGTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CAA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGAGGCTGTCCGACGAGTaGCTCAGGCCCGACTGGCTA +
Preference number: 5 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKRLSDE*LRPDWL
Trigger: TAGCCAGTCGGGCCTGAGCAACTCGTCGGACAGCCT...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATGATGACAGTTTCCTTTaGGGGGCGGCCTCGGGGTGG +
Preference number: 5 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHDDSFL*GAASGW
Trigger: CCACCCCGAGGCCGCCCCCAAAAGGAAACTGTCATC...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp GTCTCATTTCCACCCGCCAAGACTAAAACTTCCCTCATCTGCTCAGCGGTGAGTTTACAGCTTGAGTCATaGGCATCCTGGGTATCCGAG +
Preference number: 5 (lower is better)
Translates to: VSFPPAKTKTSLICSAVSLQLES*ASWVSE
Trigger: CTCGGATACCCAGGATGCCAATGACTCAAGCTGTAA...ACTCACCGCTGAGCAGATGAGGGAAGTTTTAGTCTTGGCGGGTGGAAATGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CAA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATATTGATCTGGGCAATCTaGGGGGCCTGCCGGGGACCG +
Preference number: 5 (lower is better)
Translates to: LVCVNLKVGSGSLDRITILIWAI*GACRGP
Trigger: CGGTCCCCGGCAGGCCCCCAAGATTGCCCAGATCAA...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAATTGATCTGGGCAATCTaGGGGGCCTGCCGGGGACCG +
Preference number: 5 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKLIWAI*GACRGP
Trigger: CGGTCCCCGGCAGGCCCCCAAGATTGCCCAGATCAA...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATTTGGCTGGCTTCTTaGGGACCGGAGGGGGTGGTT +
Preference number: 5 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITIWLAS*GPEGVV
Trigger: AACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAAT...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTACTGCCGGCTTGGATTaGGCTGGCTTCTTTGGGACC +
Preference number: 5 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSTAGLD*AGFFGT
Trigger: GGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGT...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCCGGCTCACTGCCGGCTaGGATTTGGCTGGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITRLTAG*DLAGFF
Trigger: AAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCG...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAGGCAGCCGGTTGATCTaGGTGGCTTGGGCATGGCTG +
Preference number: 5 (lower is better)
Translates to: VCVNLKVGSGSLDRITIAGSRLI*VAWAWL
Trigger: CAGCCATGCCCAAGCCACCAAGATCAACCGGCTGCC...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTTCCAGTGAGGGTGCCTaGGTGAAGAAAAGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSSSEGA*VKKSRW
Trigger: CCAGCGGCTTTTCTTCACCAAGGCACCCTCACTGGA...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAACCATTGCCACCGACCTaGCCCGCTGTGCCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKPLPPT*PAVPSS
Trigger: ACTGGAGGGCACAGCGGGCAAGGTCGGTGGCAATGG...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAATGCAGCTGGAGTCGTaGAGGCTGTCGCTGACGGGG +
Preference number: 5 (lower is better)
Translates to: VCVNLKVGSGSLDRITIAMQLES*RLSLTG
Trigger: CCCCGTCAGCGACAGCCTCAACGACTCCAGCTGCAT...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAAGGCTGGGCCGGGAGTaGCCGACGTCCATCTATCTA +
Preference number: 5 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRRLGRE*PTSIYL
Trigger: TAGATAGATGGACGTCGGCAACTCCCGGCCCAGCCT...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CAA 90 bp AGTGTGAGTTCTCATCAGATAGAACGAGTAAAAAGACCGCAGTATGGAGGCTGGATCGCTTTGGGTCCGTaGTCCTCCGAGAGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: SVSSHQIERVKRPQYGGWIALGP*SSERWE
Trigger: TTCCCACCTCTCGGAGGACAACGGACCCAAAGCGAT...CCAGCCTCCATACTGCGGTCTTTTTACTCGTTCTATCTGATGAGAACTCACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CAA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTTTGCCGACCAGGAATTaGTCCCTGGACTTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSLPTRN*SLDFPS
Trigger: GGAGGGGAAGTCCAGGGACAAATTCCTGGTCGGCAA...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CAA 90 bp CACTGCCGGCTTGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTGGTTTCTTAGGAAAGGAATGGATTaGTTTGACCTAAAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: HCRLGFGWLLWDRRGWFLRKGMD*FDLKSQ
Trigger: TTGGGACTTTAGGTCAAACAAATCCATTCCTTTCCT...AAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS TCA 90 bp CAGGACAGGCCTAAGAGAGTCCTTATCCCGGTGTCATTTTCTGGGTaGAAGGAATCAAGGGTAGTCCTAACTCTTAGGCTTTCCGGGAAG +
Preference number: 5 (lower is better)
Translates to: QDRPKRVLIPVSFSG*KESRVVLTLRLSGK
Trigger: CTTCCCGGAAAGCCTAAGAGTTAGGACTACCCTTGATTCCTTTCACCCAGAAAATGACACCGGGATAAGGACTCTCTTAGGCCTGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 90 bp GCAGAGTCTCCTGGCCAACTCTCTCTCTGTTTATACATGGGGAAGTaGAAGCCTAGAGCTGCCTCTTGGAGGAAACAAATACAGGCAACT +
Preference number: 5 (lower is better)
Translates to: AESPGQLSLCLYMGK*KPRAASWRKQIQAT
Trigger: AGTTGCCTGTATTTGTTTCCTCCAAGAGGCAGCTCTAGGCTTCCACTTCCCCATGTATAAACAGAGAGAGAGTTGGCCAGGAGACTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS-3UTR CAA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCACTAGTCACCTCGCTCTaGTGGTCCTGGCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: VCVNLKVGSGSLDRITIALVTSL*WSWLSR
Trigger: CCTGGACAGCCAGGACCACAAGAGCGAGGTGACTAG...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATCTAGTCACCTCGCTCTaGTGGTCCTGGCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHLVTSL*WSWLSR
Trigger: CCTGGACAGCCAGGACCACAAGAGCGAGGTGACTAG...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAAGGCTGTCCGACGAGTaGCTCAGGCCCGACTGGCTA +
Preference number: 5 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIRLSDE*LRPDWL
Trigger: TAGCCAGTCGGGCCTGAGCAACTCGTCGGACAGCCT...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCGCTGGTCAGCGTCCCTaGTTCACTTTTCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITAGQRP*FTFQSC
Trigger: GCAGCTCTGAAAAGTGAACAAGGGACGCTGACCAGC...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGATGACAGTTTCCTTTaGGGGGCGGCCTCGGGGTGG +
Preference number: 5 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIDDSFL*GAASGW
Trigger: CCACCCCGAGGCCGCCCCCAAAAGGAAACTGTCATC...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp GATTTAAAATCGTTTCTTTCCTCCTGCATGGTCTCAGAGCCTGGTCTGGGCCTCGAGAGGTTGTTCTCTTaGGTCTCCTTGTCCATCTGG +
Preference number: 5 (lower is better)
Translates to: DLKSFLSSCMVSEPGLGLERLFS*VSLSIW
Trigger: CCAGATGGACAAGGAGACCAAAGAGAACAACCTCTC...GAGGCCCAGACCAGGCTCTGAGACCATGCAGGAGGAAAGAAACGATTTTAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CAA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAACCCTTCTTGCTGCCATaGCCACCGACCTTGCCCGCT +
Preference number: 5 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKPFLLP*PPTLPA
Trigger: AGCGGGCAAGGTCGGTGGCAATGGCAGCAAGAAGGG...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCATCCATGCCACCCTTCTaGCTGCCATTGCCACCGACC +
Preference number: 5 (lower is better)
Translates to: VCVNLKVGSGSLDRITIASMPPF*LPLPPT
Trigger: GGTCGGTGGCAATGGCAGCAAGAAGGGTGGCATGGA...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAACACCAGCCTGAGATGTaGGAGCGGCTGCGCCGTTTG +
Preference number: 5 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKHQPEM*ERLRRL
Trigger: CAAACGGCGCAGCCGCTCCAACATCTCAGGCTGGTG...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAATGCAGCTGGAGTCGTaGAGGCTGTCGCTGACGGGG +
Preference number: 5 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIMQLES*RLSLTG
Trigger: CCCCGTCAGCGACAGCCTCAACGACTCCAGCTGCAT...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTTGCCCAAGGCTGCCCTaGGACTGTCGTCATCTTGTA +
Preference number: 5 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSCPRLP*DCRHLV
Trigger: TACAAGATGACGACAGTCCAAGGGCAGCCTTGGGCA...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CAA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAGGTCAAGTGACTaGCCCAAGGTCACAGACGGC +
Preference number: 5 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRQRSSD*PKVTDG
Trigger: GCCGTCTGTGACCTTGGGCAAGTCACTTGACCTCTG...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS CCA 90 bp AAACAGCAGCAGAGTCTCCTGGCCAACTCTCTCTCTGTTTATACATaGGGAAGTGGAAGCCTAGAGCTGCCTCTTGGAGGAAACAAATAC +
Preference number: 5 (lower is better)
Translates to: KQQQSLLANSLSVYT*GSGSLELPLGGNKY
Trigger: GTATTTGTTTCCTCCAAGAGGCAGCTCTAGGCTTCCACTTCCCCATGTATAAACAGAGAGAGAGTTGGCCAGGAGACTCTGCTGCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS-3UTR CAA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATGAGAAAGACCCCAACTaGGGACCTAGGAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHEKDPN*GPRSSQ
Trigger: CTGGGAGCTCCTAGGTCCCAAGTTGGGGTCTTTCTC...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS-3UTR CAA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGATTTGGCTGGCTTCTTaGGGACCGGAGGGGGTGGTT +
Preference number: 5 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKIWLAS*GPEGVV
Trigger: AACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAAT...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGACTGCCGGCTTGGATTaGGCTGGCTTCTTTGGGACC +
Preference number: 5 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKTAGLD*AGFFGT
Trigger: GGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGT...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAACATCCCTCTAGGCACTaGATCAGAGGTGCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKHPSRH*IRGAGR
Trigger: CCTGCCGGCACCTCTGATCAAGTGCCTAGAGGGATG...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373913.7
CDS-3UTR CAA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTCCATTGCCACCGACCTaGCCCGCTGTGCCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFPLPPT*PAVPSS
Trigger: ACTGGAGGGCACAGCGGGCAAGGTCGGTGGCAATGG...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAATGTGTGCGCGTGAGGTaGTGTGTGAGCACTTGGCGG +
Preference number: 5 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKCVRVR*CVSTWR
Trigger: CCGCCAAGTGCTCACACACAACCTCACGCGCACACA...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS-3UTR CAA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATCAGAGGTCAAGTGACTaGCCCAAGGTCACAGACGGC +
Preference number: 5 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHQRSSD*PKVTDG
Trigger: GCCGTCTGTGACCTTGGGCAAGTCACTTGACCTCTG...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000475894.5
CDS TCA 90 bp CCTCTTGGAGGAAACAAATACAGGCAACTGCAAGAAATTGCTCAGTaGGCCTTCTCTGTTCCATTCAAGCTCCACTTTGTGTCCCACGCT +
Preference number: 5 (lower is better)
Translates to: PLGGNKYRQLQEIAQ*AFSVPFKLHFVSHA
Trigger: AGCGTGGGACACAAAGTGGAGCTTGAATGGAACAGAGAAGGCTCACTGAGCAATTTCTTGCAGTTGCCTGTATTTGTTTCCTCCAAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS-3UTR CAA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTAGGCTGTCCGACGAGTaGCTCAGGCCCGACTGGCTA +
Preference number: 5 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFRLSDE*LRPDWL
Trigger: TAGCCAGTCGGGCCTGAGCAACTCGTCGGACAGCCT...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAGCTGGTCAGCGTCCCTaGTTCACTTTTCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: VCVNLKVGSGSLDRITIAAGQRP*FTFQSC
Trigger: GCAGCTCTGAAAAGTGAACAAGGGACGCTGACCAGC...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATGACTGGGCTCCTCTTTaGGCACTGGCTGAATGCAGT +
Preference number: 5 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHDWAPL*ALAECS
Trigger: ACTGCATTCAGCCAGTGCCAAAAGAGGAGCCCAGTC...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
CDS-3UTR CAA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTGAGAGGTTGTTCTCTTaGGTCTCCTTGTCCATCTGG +
Preference number: 5 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSERLFS*VSLSIW
Trigger: CCAGATGGACAAGGAGACCAAAGAGAACAACCTCTC...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTATTTGGCTGGCTTCTTaGGGACCGGAGGGGGTGGTT +
Preference number: 5 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVIWLAS*GPEGVV
Trigger: AACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAAT...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAATCCAGTGAGGGTGCCTaGGTGAAGAAAAGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKSSEGA*VKKSRW
Trigger: CCAGCGGCTTTTCTTCACCAAGGCACCCTCACTGGA...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTTTGGGCTCCCCAGCCTaGGCCCGCTCCTTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFLGSPA*ARSLLL
Trigger: CAAAAGCAAGGAGCGGGCCAAGGCTGGGGAGCCCAA...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS GCA 90 bp AGAGCTGCCTCTTGGAGGAAACAAATACAGGCAACTGCAAGAAATTaGTCAGTGAGCCTTCTCTGTTCCATTCAAGCTCCACTTTGTGTC +
Preference number: 5 (lower is better)
Translates to: RAASWRKQIQATARN*SVSLLCSIQAPLCV
Trigger: GACACAAAGTGGAGCTTGAATGGAACAGAGAAGGCTCACTGAGCAATTTCTTGCAGTTGCCTGTATTTGTTTCCTCCAAGAGGCAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 90 bp TCTCTCTGTTTATACATGGGGAAGTGGAAGCCTAGAGCTGCCTCTTaGAGGAAACAAATACAGGCAACTGCAAGAAATTGCTCAGTGAGC +
Preference number: 5 (lower is better)
Translates to: SLCLYMGKWKPRAAS*RKQIQATARNCSVS
Trigger: GCTCACTGAGCAATTTCTTGCAGTTGCCTGTATTTGTTTCCTCCAAGAGGCAGCTCTAGGCTTCCACTTCCCCATGTATAAACAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS-3UTR CAA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGCTGGTCAGCGTCCCTaGTTCACTTTTCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKAGQRP*FTFQSC
Trigger: GCAGCTCTGAAAAGTGAACAAGGGACGCTGACCAGC...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGACTGGGCTCCTCTTTaGGCACTGGCTGAATGCAGT +
Preference number: 5 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKDWAPL*ALAECS
Trigger: ACTGCATTCAGCCAGTGCCAAAAGAGGAGCCCAGTC...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
CDS-3UTR CAA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTCCGATGGACTGGAATTaGGTAGCGGGACTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFPMDWN*VAGLGS
Trigger: GGAGCCCAGTCCCGCTACCAAATTCCAGTCCATCGG...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
CDS-3UTR CAA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGATTACAGCTTGAGTCATaGGCATCCTGGGTATCCGAG +
Preference number: 5 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRLQLES*ASWVSE
Trigger: CTCGGATACCCAGGATGCCAATGACTCAAGCTGTAA...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGATGGCAGGATTTGGACTaGAGCAGGCTCTTATCCAAG +
Preference number: 5 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRWQDLD*SRLLSK
Trigger: CTTGGATAAGAGCCTGCTCAAGTCCAAATCCTGCCA...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATACCCTGGTGGCAGGATTaGGACTTGAGCAGGCTCTTA +
Preference number: 5 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIPWWQD*DLSRLL
Trigger: TAAGAGCCTGCTCAAGTCCAAATCCTGCCACCAGGG...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTGGAAGCGTGCGACTATaGCTGAGGCTGCCGGTACTG +
Preference number: 5 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFGSVRL*LRLPVL
Trigger: CAGTACCGGCAGCCTCAGCAATAGTCGCACGCTTCC...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAATCACATCGATCGCTTaGGGTCCGTTGTCCTCCGAG +
Preference number: 5 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIITSIA*GPLSSE
Trigger: CTCGGAGGACAACGGACCCAAAGCGATCGATGTGAT...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000489701.5
CDS-3UTR CAA 90 bp TGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAGTTACAGCTTGAGTCATaGGCATCCTGGGTATCCGAG +
Preference number: 5 (lower is better)
Translates to: CVNLKVGSGSLDRITIAKLQLES*ASWVSE
Trigger: CTCGGATACCCAGGATGCCAATGACTCAAGCTGTAA...CTTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp GTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAGAGAGGTTGTTCTCTTaGGTCTCCTTGTCCATCTGG +
Preference number: 5 (lower is better)
Translates to: VCVNLKVGSGSLDRITIAERLFS*VSLSIW
Trigger: CCAGATGGACAAGGAGACCAAAGAGAACAACCTCTC...TGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp AGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTACTTCTTCAGAGAGGTaGTTCTCTTTGGTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SQIVSPCMRQFESWLRVSTSSER*FSLVSL
Trigger: CAAGGAGACCAAAGAGAACAACCTCTCTGAAGAAGT...AGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTACTGCCGGCTTGGATTaGGCTGGCTTCTTTGGGACC +
Preference number: 5 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFTAGLD*AGFFGT
Trigger: GGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGT...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTCGGCTCACTGCCGGCTaGGATTTGGCTGGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFRLTAG*DLAGFF
Trigger: AAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCG...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp GCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCTCAGTAGTGTTGTTCTaGGTGGTTTTGAGCATGTGC +
Preference number: 5 (lower is better)
Translates to: ALVCVNLKVGSGSLDRITSVVLF*VVLSMC
Trigger: GCACATGCTCAAAACCACCAAGAACAACACTACTGA...GGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp CAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGAGTCAGCTCAGTAGTGTaGTTCTTGGTGGTTTTGAGC +
Preference number: 5 (lower is better)
Translates to: QIVSPCMRQFESWLRVSRVSSVV*FLVVLS
Trigger: GCTCAAAACCACCAAGAACAACACTACTGAGCTGAC...TCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTGGGCCAGGCCTAGGCTaGGCATCACTCCTCATTTCT +
Preference number: 5 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFGPGLG*ASLLIS
Trigger: AGAAATGAGGAGTGATGCCAAGCCTAGGCCTGGCCC...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CAA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAATTACAGCTTGAGTCATaGGCATCCTGGGTATCCGAG +
Preference number: 5 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKLQLES*ASWVSE
Trigger: CTCGGATACCCAGGATGCCAATGACTCAAGCTGTAA...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATACAGATGACTTACAGCTaGAGTCATTGGCATCCTGGG +
Preference number: 5 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIQMTYS*SHWHPG
Trigger: CCCAGGATGCCAATGACTCAAGCTGTAAGTCATCTG...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp CTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGAGAGGTTGTTCTCTTaGGTCTCCTTGTCCATCTGG +
Preference number: 5 (lower is better)
Translates to: LVCVNLKVGSGSLDRITIERLFS*VSLSIW
Trigger: CCAGATGGACAAGGAGACCAAAGAGAACAACCTCTC...TATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp AAAAGCCAAATTGTGAGCCCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCCTTGTATGCGTCAATTaGAAAGTTGGCTCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: KSQIVSPCMRQFESWLRVLVCVN*KVGSGS
Trigger: AGACCCTGAGCCAACTTTCAAATTGACGCATACAAG...GACCCTGAGCCAACTTTCAAATTGACGCATACAAGGGCTCACAATTTGGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTGGCAGGATTTGGACTaGAGCAGGCTCTTATCCAAG +
Preference number: 5 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVWQDLD*SRLLSK
Trigger: CTTGGATAAGAGCCTGCTCAAGTCCAAATCCTGCCA...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp CCTTGTATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATCTTGTATGCGTCAATTaGAAAGTTGGCTCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: PCMRQFESWLRVSRQNNHLVCVN*KVGSGS
Trigger: AGACCCTGAGCCAACTTTCAAATTGACGCATACAAG...ATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCATACAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTATGTGGGCAGCGTTATaGCCGACCAGGAATTTGTCC +
Preference number: 5 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFMWAAL*PTRNLS
Trigger: GGACAAATTCCTGGTCGGCAATAACGCTGCCCACAT...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CAA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTCAGATGACTTACAGCTaGAGTCATTGGCATCCTGGG +
Preference number: 5 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFQMTYS*SHWHPG
Trigger: CCCAGGATGCCAATGACTCAAGCTGTAAGTCATCTG...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp ATGCGTCAATTTGAAAGTTGGCTCAGGGTCTCTAGACAGAATAACCATAGCAAAACTTCTTCAGAGAGGTaGTTCTCTTTGGTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: MRQFESWLRVSRQNNHSKTSSER*FSLVSL
Trigger: CAAGGAGACCAAAGAGAACAACCTCTCTGAAGAAGT...TTTGCTATGGTTATTCTGTCTAGAGACCCTGAGCCAACTTTCAAATTGACGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS-3UTR CAA 90 bp GACAGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTCCAAGACCTGGACGTTaGTTTAGAGCAACTCTTGAA +
Preference number: 5 (lower is better)
Translates to: DRITIAKVEKTLFRSHLVPRPGR*FRATLE
Trigger: TTCAAGAGTTGCTCTAAACAAACGTCCAGGTCTTGG...AACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS-3UTR CAA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTGTCAGCTCAGTAGTGTaGTTCTTGGTGGTTTTGAGC +
Preference number: 5 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFVSSVV*FLVVLS
Trigger: GCTCAAAACCACCAAGAACAACACTACTGAGCTGAC...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373907.6
ENST00000373913.7
CDS-3UTR CAA 90 bp AGAATAACCATAGCAAAGGTTGAGAAAACTCTGTTCCGTTCGCACTTAGTTTTTACTTCTTCAGAGAGGTaGTTCTCTTTGGTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RITIAKVEKTLFRSHLVFTSSER*FSLVSL
Trigger: CAAGGAGACCAAAGAGAACAACCTCTCTGAAGAAGT...AAAAACTAAGTGCGAACGGAACAGAGTTTTCTCAACCTTTGCTATGGTTATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000489701.5
CDS CCA 72 bp CGGCCGCGGCATCCGTCTCGCGTGGGGACAGCAGCGTaGTGCTCCACTCGCCGCCGCCGCCGGGCACCTGCA +
Preference number: 6 (lower is better)
Translates to: RPRHPSRVGTAA*CSTRRRRRAPA
Trigger: TGCAGGTGCCCGGCGGCGGCGGCGAGTGGAGCACCACGCTGCTGTCCCCACGCGAGACGGATGCCGCGGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS GCA 72 bp GGCGCCGCGCCGCGGTCTTGGGTGAGGGCTTGGGGCTaGCGCCGGACTCGTCGCTGTCCTCGTCGCCCATGG +
Preference number: 6 (lower is better)
Translates to: GAAPRSWVRAWG*RRTRRCPRRPW
Trigger: CCATGGGCGACGAGGACAGCGACGAGTCCGGCGGCAGCCCCAAGCCCTCACCCAAGACCGCGGCGCGGCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 72 bp CGGGATAGGGCCCTCGGCCGCGGCATCCGTCTCGCGTaGGGACAGCAGCGTGGTGCTCCACTCGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: RDRALGRGIRLA*GQQRGAPLAAA
Trigger: GGCGGCGGCGAGTGGAGCACCACGCTGCTGTCCCCACGCGAGACGGATGCCGCGGCCGAGGGCCCTATCCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 72 bp GGGGAGAGACAAAGCGGGCGGAGCGGGGACACGGGCTaGAGGACTGGCGGCTGGACAGGACGGAAGCGCGGG +
Preference number: 6 (lower is better)
Translates to: GERQSGRSGDTG*RTGGWTGRKRG
Trigger: CCCGCGCTTCCGTCCTGTCCAGCCGCCAGTCCTCCAGCCCGTGTCCCCGCTCCGCCCGCTTTGTCTCTCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS CCA 72 bp TGGCCCTCAGATAGCTCTGGCGCCGCGCCGCGGTCTTaGGTGAGGGCTTGGGGCTGCCGCCGGACTCGTCGC +
Preference number: 6 (lower is better)
Translates to: WPSDSSGAAPRS*VRAWGCRRTRR
Trigger: GCGACGAGTCCGGCGGCAGCCCCAAGCCCTCACCCAAGACCGCGGCGCGGCGCCAGAGCTATCTGAGGGCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS GCA 72 bp GAGGTGCCGGCAGGAAGCAGCTTGGGACAGGGGCTCTaGCACCGCCCGGGGGCCACCAGGTCCTGGTCACAC +
Preference number: 6 (lower is better)
Translates to: EVPAGSSLGQGL*HRPGATRSWSH
Trigger: GTGTGACCAGGACCTGGTGGCCCCCGGGCGGTGGCAGAGCCCCTGTCCCAAGCTGCTTCCTGCCGGCACCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339266.10
ENST00000373913.7
CDS TCA 72 bp AGAGGTGGCGGGGGCGGCTGTCACCGAGGCCTTTCATaGTCCCGGGCCGAGGGCAGGGGCCTTCACCCTAGC +
Preference number: 6 (lower is better)
Translates to: RGGGGGCHRGLS*SRAEGRGLHPS
Trigger: GCTAGGGTGAAGGCCCCTGCCCTCGGCCCGGGATCATGAAAGGCCTCGGTGACAGCCGCCCCCGCCACCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 72 bp TGCGGGGGTTGCTCTGCTCTCCCAGCGACTGCTGCGTaGCCCTCAGATAGCTCTGGCGCCGCGCCGCGGTCT +
Preference number: 6 (lower is better)
Translates to: CGGCSALPATAA*PSDSSGAAPRS
Trigger: AGACCGCGGCGCGGCGCCAGAGCTATCTGAGGGCCACGCAGCAGTCGCTGGGAGAGCAGAGCAACCCCCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CAA 72 bp CTCCTCCCTCACGCAGCCCGGCCCGAGGCTCCGGTTTaGTACGCCCGAGGGGCGGGGCTCCGGGTTAAAGTC +
Preference number: 6 (lower is better)
Translates to: LLPHAARPEAPV*YARGAGLRVKV
Trigger: GACTTTAACCCGGAGCCCCGCCCCTCGGGCGTACAAAACCGGAGCCTCGGGCCGGGCTGCGTGAGGGAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475894.5
CDS GCA 72 bp CGACTCCACCCCGTGTCACGCTGGGCGGTCGGGTACTaGTGTCCAGGCTGTCCGACGAGTTGCTCAGGCCCG +
Preference number: 6 (lower is better)
Translates to: RLHPVSRWAVGY*CPGCPTSCSGP
Trigger: CGGGCCTGAGCAACTCGTCGGACAGCCTGGACAGCAGTACCCGACCGCCCAGCGTGACACGGGGTGGAGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000339266.10
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000479220.5
ENST00000482037.5
ENST00000482872.5
ENST00000489701.5
ENST00000491207.5
ENST00000495241.5
CDS GCA 72 bp CTGGGCCCCTGGCCCAACAGCGTCTATGCTCCATGCTaGTCCTGCCGCCAAGCGGGGCTATGGCCTCCGCAC +
Preference number: 6 (lower is better)
Translates to: LGPWPNSVYAPC*SCRQAGLWPPH
Trigger: GTGCGGAGGCCATAGCCCCGCTTGGCGGCAGGAGCAGCATGGAGCATAGACGCTGTTGGGCCAGGGGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479951.1
CDS GCA 72 bp GTCCTGGGCCCCTGGCCCAACAGCGTCTATGCTCCATaGTGCTCCTGCCGCCAAGCGGGGCTATGGCCTCCG +
Preference number: 6 (lower is better)
Translates to: VLGPWPNSVYAP*CSCRQAGLWPP
Trigger: CGGAGGCCATAGCCCCGCTTGGCGGCAGGAGCAGCATGGAGCATAGACGCTGTTGGGCCAGGGGCCCAGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479951.1
CDS GCA 72 bp GCCCTGGGTCCTGGGCCCCTGGCCCAACAGCGTCTATaGTCCATGCTGCTCCTGCCGCCAAGCGGGGCTATG +
Preference number: 6 (lower is better)
Translates to: ALGPGPLAQQRL*SMLLLPPSGAM
Trigger: CATAGCCCCGCTTGGCGGCAGGAGCAGCATGGAGCATAGACGCTGTTGGGCCAGGGGCCCAGGACCCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479951.1
CDS GCA 72 bp CCCTCCGGCCCTTGCCGTCCTCCATGCCACCCTTCTTaGTGCCATTGCCACCGACCTTGCCCGCTGTGCCCT +
Preference number: 6 (lower is better)
Translates to: PSGPCRPPCHPS*CHCHRPCPLCP
Trigger: AGGGCACAGCGGGCAAGGTCGGTGGCAATGGCAGCAAGAAGGGTGGCATGGAGGACGGCAAGGGCCGGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS GCA 72 bp CATCGGAGCTCCACCAGCCTGAGATGTTGGAGCGGCTaGGCCGTTTGGGCTCCCCAGCCTTGGCCCGCTCCT +
Preference number: 6 (lower is better)
Translates to: HRSSTSLRCWSG*AVWAPQPWPAP
Trigger: AGGAGCGGGCCAAGGCTGGGGAGCCCAAACGGCGCAGCCGCTCCAACATCTCAGGCTGGTGGAGCTCCGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 72 bp GGGCAGCTGGTTGTTGAGGGGAAAGAGGCCATCTCCTaGCAGGGTGTTCTGCCCGGGGAAGCGGGCCTCGCG +
Preference number: 6 (lower is better)
Translates to: GQLVVEGKEAIS*QGVLPGEAGLA
Trigger: CGCGAGGCCCGCTTCCCCGGGCAGAACACCCTGCCAGGAGATGGCCTCTTTCCCCTCAACAACCAGCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 72 bp AGATCTGGGGGCGCTCTGAGGGGGAGTCCCGAAGAGTaGGGTCGCCCAGAAAGGGCGGCTCTGAGGGCTGAA +
Preference number: 6 (lower is better)
Translates to: RSGGALRGSPEE*GRPERAALRAE
Trigger: TTCAGCCCTCAGAGCCGCCCTTTCTGGGCGACCCCACTCTTCGGGACTCCCCCTCAGAGCGCCCCCAGATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS CCA 72 bp CTCTCACCACGGGCCTTGGCCTCGCCACGGGGAAATTaGAGGGTGCTGAAGCCATCACGGTGGATGGGCAGC +
Preference number: 6 (lower is better)
Translates to: LSPRALASPRGN*RVLKPSRWMGS
Trigger: GCTGCCCATCCACCGTGATGGCTTCAGCACCCTCCAATTTCCCCGTGGCGAGGCCAAGGCCCGTGGTGAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 72 bp TCCACCAGCCTGAGATGTTGGAGCGGCTGCGCCGTTTaGGCTCCCCAGCCTTGGCCCGCTCCTTGCTTTTGG +
Preference number: 6 (lower is better)
Translates to: STSLRCWSGCAV*APQPWPAPCFW
Trigger: CCAAAAGCAAGGAGCGGGCCAAGGCTGGGGAGCCCAAACGGCGCAGCCGCTCCAACATCTCAGGCTGGTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 72 bp AGCTGGGCAGTGGCAAGTCAAGCGTCTCTGCCGCTGTaGACTCCGCTTCACTGCAGGCTGACTCGCAGGCCG +
Preference number: 6 (lower is better)
Translates to: SWAVASQASLPL*TPLHCRLTRRP
Trigger: CGGCCTGCGAGTCAGCCTGCAGTGAAGCGGAGTCCACAGCGGCAGAGACGCTTGACTTGCCACTGCCCAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 72 bp CACGCAGGTAGCTGTGGCTGCGGGAGCGGAAGTAGCTaGGCAGTGGCAAGTCAAGCGTCTCTGCCGCTGTGG +
Preference number: 6 (lower is better)
Translates to: HAGSCGCGSGSS*AVASQASLPLW
Trigger: CCACAGCGGCAGAGACGCTTGACTTGCCACTGCCCAGCTACTTCCGCTCCCGCAGCCACAGCTACCTGCGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CAA 72 bp GCTCTCACCACGGGCCTTGGCCTCGCCACGGGGAAATaGGAGGGTGCTGAAGCCATCACGGTGGATGGGCAG +
Preference number: 6 (lower is better)
Translates to: ALTTGLGLATGK*EGAEAITVDGQ
Trigger: CTGCCCATCCACCGTGATGGCTTCAGCACCCTCCAATTTCCCCGTGGCGAGGCCAAGGCCCGTGGTGAGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CAA 72 bp CTCCACCAGCCTGAGATGTTGGAGCGGCTGCGCCGTTaGGGCTCCCCAGCCTTGGCCCGCTCCTTGCTTTTG +
Preference number: 6 (lower is better)
Translates to: LHQPEMLERLRR*GSPALARSLLL
Trigger: CAAAAGCAAGGAGCGGGCCAAGGCTGGGGAGCCCAAACGGCGCAGCCGCTCCAACATCTCAGGCTGGTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CAA 90 bp AGCGGGCACTGGACCGAGGGCTGGCACACACATCCCTCTAGGCACTaGATCAGAGGTGCCGGCAGGAAGCAGCTTGGGACAGGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: SGHWTEGWHTHPSRH*IRGAGRKQLGTGAL
Trigger: CAGAGCCCCTGTCCCAAGCTGCTTCCTGCCGGCACCTCTGATCAAGTGCCTAGAGGGATGTGTGTGCCAGCCCTCGGTCCAGTGCCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339266.10
ENST00000373913.7
CDS CAA 90 bp TTGCTTTTGGCCCTCCGGCCCTTGCCGTCCTCCATGCCACCCTTCTaGCTGCCATTGCCACCGACCTTGCCCGCTGTGCCCTCCAGTGAG +
Preference number: 6 (lower is better)
Translates to: LLLALRPLPSSMPPF*LPLPPTLPAVPSSE
Trigger: CTCACTGGAGGGCACAGCGGGCAAGGTCGGTGGCAATGGCAGCAAGAAGGGTGGCATGGAGGACGGCAAGGGCCGGAGGGCCAAAAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS TCA 72 bp CAGGGTCGCTGTTGTCTCCATAGGAGAGGTTGCGCTTaGTCTGGGCAATCTTGGGGGCCTGCCGGGGACCGG +
Preference number: 6 (lower is better)
Translates to: QGRCCLHRRGCA*SGQSWGPAGDR
Trigger: CCGGTCCCCGGCAGGCCCCCAAGATTGCCCAGATCAAGCGCAACCTCTCCTATGGAGACAACAGCGACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000339266.10
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000478910.5
ENST00000479951.1
ENST00000489701.5
ENST00000495241.5
CDS TCA 72 bp CCTTGCCCGCTGTGCCCTCCAGTGAGGGTGCCTTGGTaGAGAAAAGCCGCTGGACTGAGTGGACCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: PCPLCPPVRVPW*RKAAGLSGPGG
Trigger: GCCACCTGGTCCACTCAGTCCAGCGGCTTTTCTTCACCAAGGCACCCTCACTGGAGGGCACAGCGGGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS TCA 72 bp CGTCTCTGCCGCTGTGGACTCCGCTTCACTGCAGGCTaGCTCGCAGGCCGCCTCATACTGGTCACTCAGCTC +
Preference number: 6 (lower is better)
Translates to: RLCRCGLRFTAG*LAGRLILVTQL
Trigger: GAGCTGAGTGACCAGTATGAGGCGGCCTGCGAGTCAGCCTGCAGTGAAGCGGAGTCCACAGCGGCAGAGACG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS GCA 72 bp GAGAGGTTGCGCTTGATCTGGGCAATCTTGGGGGCCTaGCGGGGACCGGCATCGATGCTGATGGAGTTGGGG +
Preference number: 6 (lower is better)
Translates to: ERLRLIWAILGA*RGPASMLMELG
Trigger: CCCCAACTCCATCAGCATCGATGCCGGTCCCCGGCAGGCCCCCAAGATTGCCCAGATCAAGCGCAACCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000339266.10
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000478910.5
ENST00000479951.1
ENST00000489701.5
ENST00000495241.5
CDS GCA 72 bp CCTTGCTTTTGGCCCTCCGGCCCTTGCCGTCCTCCATaGCACCCTTCTTGCTGCCATTGCCACCGACCTTGC +
Preference number: 6 (lower is better)
Translates to: PCFWPSGPCRPP*HPSCCHCHRPC
Trigger: GCAAGGTCGGTGGCAATGGCAGCAAGAAGGGTGGCATGGAGGACGGCAAGGGCCGGAGGGCCAAAAGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 72 bp AAGGTGGCTGAGGTCTTCTGGCAGACCTCGTGGGCGTaGCTGAGGGTCAGAGTGGACCAGGAGCCCCGTTTG +
Preference number: 6 (lower is better)
Translates to: KVAEVFWQTSWA*LRVRVDQEPRL
Trigger: CAAACGGGGCTCCTGGTCCACTCTGACCCTCAGCCACGCCCACGAGGTCTGCCAGAAGACCTCAGCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CAA 72 bp CCGACCTTGCCCGCTGTGCCCTCCAGTGAGGGTGCCTaGGTGAAGAAAAGCCGCTGGACTGAGTGGACCAGG +
Preference number: 6 (lower is better)
Translates to: PTLPAVPSSEGA*VKKSRWTEWTR
Trigger: CCTGGTCCACTCAGTCCAGCGGCTTTTCTTCACCAAGGCACCCTCACTGGAGGGCACAGCGGGCAAGGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS TCA 72 bp GGACCGAGGGCTGGCACACACATCCCTCTAGGCACTTaGTCAGAGGTGCCGGCAGGAAGCAGCTTGGGACAG +
Preference number: 6 (lower is better)
Translates to: GPRAGTHIPLGT*SEVPAGSSLGQ
Trigger: CTGTCCCAAGCTGCTTCCTGCCGGCACCTCTGATCAAGTGCCTAGAGGGATGTGTGTGCCAGCCCTCGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339266.10
ENST00000373913.7
CDS TCA 72 bp GGGCCTTGGCCTCGCCACGGGGAAATTGGAGGGTGCTaGAGCCATCACGGTGGATGGGCAGCTGCTTCTCAA +
Preference number: 6 (lower is better)
Translates to: GPWPRHGEIGGC*SHHGGWAAASQ
Trigger: TTGAGAAGCAGCTGCCCATCCACCGTGATGGCTTCAGCACCCTCCAATTTCCCCGTGGCGAGGCCAAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS GCA 72 bp GGAGGAGTCCCTTGCAGCCTGTGCCACAACACACAATaGCTCGTCCTCCCTGACTCAACCCCTGGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: GGVPCSLCHNTQ*LVLPDSTPGLG
Trigger: CCCAAGCCCAGGGGTTGAGTCAGGGAGGACGAGGCATTGTGTGTTGTGGCACAGGCTGCAAGGGACTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 72 bp TTATCCAAGGTGGCTGAGGTCTTCTGGCAGACCTCGTaGGCGTGGCTGAGGGTCAGAGTGGACCAGGAGCCC +
Preference number: 6 (lower is better)
Translates to: LSKVAEVFWQTS*AWLRVRVDQEP
Trigger: GGGCTCCTGGTCCACTCTGACCCTCAGCCACGCCCACGAGGTCTGCCAGAAGACCTCAGCCACCTTGGATAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 72 bp GCTTCACTGCAGGCTGACTCGCAGGCCGCCTCATACTaGTCACTCAGCTCTGCCTCCCGTACCTGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: ASLQADSQAASY*SLSSASRTCCS
Trigger: TGAGCAGCAGGTACGGGAGGCAGAGCTGAGTGACCAGTATGAGGCGGCCTGCGAGTCAGCCTGCAGTGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CAA 72 bp GCCACTAGGCATGATGAACTCGGAAGCGTGCGACTATaGCTGAGGCTGCCGGTACTGGGCGGTGGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: ATRHDELGSVRL*LRLPVLGGGER
Trigger: CCTCTCCCCACCGCCCAGTACCGGCAGCCTCAGCAATAGTCGCACGCTTCCGAGTTCATCATGCCTAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CAA 90 bp TTGCCGTCCTCCATGCCACCCTTCTTGCTGCCATTGCCACCGACCTaGCCCGCTGTGCCCTCCAGTGAGGGTGCCTTGGTGAAGAAAAGC +
Preference number: 6 (lower is better)
Translates to: LPSSMPPFLLPLPPT*PAVPSSEGALVKKS
Trigger: GCTTTTCTTCACCAAGGCACCCTCACTGGAGGGCACAGCGGGCAAGGTCGGTGGCAATGGCAGCAAGAAGGGTGGCATGGAGGACGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS TCA 72 bp GTATCCGAGTCTGTGTCCCGTCGGGAGGACATACTGTaGGAGGGGACGCTGCTTCGCCAGTCGTCCTCTACC +
Preference number: 6 (lower is better)
Translates to: VSESVSRREDIL*EGTLLRQSSST
Trigger: GGTAGAGGACGACTGGCGAAGCAGCGTCCCCTCTCACAGTATGTCCTCCCGACGGGACACAGACTCGGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339266.10
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
ENST00000478910.5
ENST00000479220.5
ENST00000479951.1
ENST00000482872.5
CDS TCA 72 bp CTAGGCATGATGAACTCGGAAGCGTGCGACTATTGCTaGGGCTGCCGGTACTGGGCGGTGGGGAGAGGGACT +
Preference number: 6 (lower is better)
Translates to: LGMMNSEACDYC*GCRYWAVGRGT
Trigger: AGTCCCTCTCCCCACCGCCCAGTACCGGCAGCCTCAGCAATAGTCGCACGCTTCCGAGTTCATCATGCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS GCA 72 bp CTGTGGCAGAAACCTGGAGGGCAGGCCAGAGGCGCCTaGACTAAGGGCAAACCCTGGACGGCAGTTCTAGAT +
Preference number: 6 (lower is better)
Translates to: LWQKPGGQARGA*TKGKPWTAVLD
Trigger: ATCTAGAACTGCCGTCCAGGGTTTGCCCTTAGTGCAGGCGCCTCTGGCCTGCCCTCCAGGTTTCTGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 72 bp AGGAGTCAGCTCAGGAGCGGGCACTGGACCGAGGGCTaGCACACACATCCCTCTAGGCACTTGATCAGAGGT +
Preference number: 6 (lower is better)
Translates to: RSQLRSGHWTEG*HTHPSRHLIRG
Trigger: ACCTCTGATCAAGTGCCTAGAGGGATGTGTGTGCCAGCCCTCGGTCCAGTGCCCGCTCCTGAGCTGACTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 72 bp GGGCAGGCCAGAGGCGCCTGCACTAAGGGCAAACCCTaGACGGCAGTTCTAGATTCAGAAACTGCCACCCAC +
Preference number: 6 (lower is better)
Translates to: GQARGACTKGKP*TAVLDSETATH
Trigger: GTGGGTGGCAGTTTCTGAATCTAGAACTGCCGTCCAGGGTTTGCCCTTAGTGCAGGCGCCTCTGGCCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CAA 72 bp CGCGGCTCACTGCCGGCTTGGATTTGGCTGGCTTCTTaGGGACCGGAGGGGGTGGTTTCTTCTCTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: RGSLPAWIWLAS*GPEGVVSSLPS
Trigger: GGAAGGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339266.10
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000478910.5
CDS CAA 72 bp TGGACCGAGGGCTGGCACACACATCCCTCTAGGCACTaGATCAGAGGTGCCGGCAGGAAGCAGCTTGGGACA +
Preference number: 6 (lower is better)
Translates to: WTEGWHTHPSRH*IRGAGRKQLGT
Trigger: TGTCCCAAGCTGCTTCCTGCCGGCACCTCTGATCAAGTGCCTAGAGGGATGTGTGTGCCAGCCCTCGGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339266.10
ENST00000373913.7
CDS CAA 90 bp AGGCCTTGTCGCGGCTCACTGCCGGCTTGGATTTGGCTGGCTTCTTaGGGACCGGAGGGGGTGGTTTCTTCTCTTCCTTCCTCTTCTCGG +
Preference number: 6 (lower is better)
Translates to: RPCRGSLPAWIWLAS*GPEGVVSSLPSSSR
Trigger: CCGAGAAGAGGAAGGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGCGACAAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339266.10
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000478910.5
CDS TCA 72 bp GAAGCTGGCGGCTGTCTTGAGGCAAAGATCACTCCCTaGACCCTGTGGCAGAAACCTGGAGGGCAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: EAGGCLEAKITP*TLWQKPGGQAR
Trigger: TCTGGCCTGCCCTCCAGGTTTCTGCCACAGGGTTCAGGGAGTGATCTTTGCCTCAAGACAGCCGCCAGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS GCA 72 bp AACAATGGTCGGGAAAGAGCCTGGCTGATTACACAATaGCTCACACAGCCCTCCTCCCTCACGCAGCCCGGC +
Preference number: 6 (lower is better)
Translates to: NNGRERAWLITQ*LTQPSSLTQPG
Trigger: GCCGGGCTGCGTGAGGGAGGAGGGCTGTGTGAGGCATTGTGTAATCAGCCAGGCTCTTTCCCGACCATTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482872.5
CDS CCA 72 bp GACCCCAACTTGGGACCTAGGAGCTCCCAGTGGATATaGGGAACACCCAGAAGAGGGAAAGCCCAGGGGCAA +
Preference number: 6 (lower is better)
Translates to: DPNLGPRSSQWI*GTPRRGKAQGQ
Trigger: TTGCCCCTGGGCTTTCCCTCTTCTGGGTGTTCCCCATATCCACTGGGAGCTCCTAGGTCCCAAGTTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS CCA 72 bp GCGGCTCACTGCCGGCTTGGATTTGGCTGGCTTCTTTaGGACCGGAGGGGGTGGTTTCTTCTCTTCCTTCCT +
Preference number: 6 (lower is better)
Translates to: AAHCRLGFGWLL*DRRGWFLLFLP
Trigger: AGGAAGGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAGCCGGCAGTGAGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339266.10
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000478910.5
CDS CCA 72 bp TTGAGCAGGCTCTTATCCAAGGTGGCTGAGGTCTTCTaGCAGACCTCGTGGGCGTGGCTGAGGGTCAGAGTG +
Preference number: 6 (lower is better)
Translates to: LSRLLSKVAEVF*QTSWAWLRVRV
Trigger: CACTCTGACCCTCAGCCACGCCCACGAGGTCTGCCAGAAGACCTCAGCCACCTTGGATAAGAGCCTGCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CAA 90 bp GGTGAGGGGTACAGTCCGGGAGGCTCCTCTCAGATGACTTACAGCTaGAGTCATTGGCATCCTGGGTATCCGAGTCTGTGTCCCGTCGGG +
Preference number: 6 (lower is better)
Translates to: GEGYSPGGSSQMTYS*SHWHPGYPSLCPVG
Trigger: CCCGACGGGACACAGACTCGGATACCCAGGATGCCAATGACTCAAGCTGTAAGTCATCTGAGAGGAGCCTCCCGGACTGTACCCCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339266.10
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000478910.5
ENST00000479951.1
ENST00000482872.5
ENST00000489701.5
ENST00000495241.5
CDS CAA 90 bp CTGCCACCCACAGGAGCCACCGAAGTCCCTGGACGTTATTCACACTaGGCTGAGGTTACCTTTAGCACTGGGTGGCCCTGGGGAGCAGTA +
Preference number: 6 (lower is better)
Translates to: LPPTGATEVPGRYSH*AEVTFSTGWPWGAV
Trigger: TACTGCTCCCCAGGGCCACCCAGTGCTAAAGGTAACCTCAGCCAAGTGTGAATAACGTCCAGGGACTTCGGTGGCTCCTGTGGGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS TCA 72 bp GGATTTGGACTTGAGCAGGCTCTTATCCAAGGTGGCTaGGGTCTTCTGGCAGACCTCGTGGGCGTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: GFGLEQALIQGG*GLLADLVGVAE
Trigger: CTCAGCCACGCCCACGAGGTCTGCCAGAAGACCTCAGCCACCTTGGATAAGAGCCTGCTCAAGTCCAAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS GCA 72 bp GTGAAGTGGAACAGGACAACAGTGATGCCCTGCGCCTaGCTTTCTTCTCTGGGACAAAGGTCCCGGGCCATG +
Preference number: 6 (lower is better)
Translates to: VKWNRTTVMPCA*LSSLGQRSRAM
Trigger: CATGGCCCGGGACCTTTGTCCCAGAGAAGAAAGGCAGGCGCAGGGCATCACTGTTGTCCTGTTCCACTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS GCA 72 bp GGGCAAACCCTGGACGGCAGTTCTAGATTCAGAAACTaGCACCCACAGGAGCCACCGAAGTCCCTGGACGTT +
Preference number: 6 (lower is better)
Translates to: GQTLDGSSRFRN*HPQEPPKSLDV
Trigger: AACGTCCAGGGACTTCGGTGGCTCCTGTGGGTGGCAGTTTCTGAATCTAGAACTGCCGTCCAGGGTTTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 72 bp TGCTTTCTGAGGAGGGTGCCATCACATCGATCGCTTTaGGTCCGTTGTCCTCCGAGAGGTGGGAACCGTTCC +
Preference number: 6 (lower is better)
Translates to: CFLRRVPSHRSL*VRCPPRGGNRS
Trigger: GGAACGGTTCCCACCTCTCGGAGGACAACGGACCCAAAGCGATCGATGTGATGGCACCCTCCTCAGAAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000489701.5
CDS CCA 72 bp TATCAGCTGGGCCACATCCAATTGCTCAGGGGTGGCTaGAGGAGTCCCTTGCAGCCTGTGCCACAACACACA +
Preference number: 6 (lower is better)
Translates to: YQLGHIQLLRGG*RSPLQPVPQHT
Trigger: TGTGTGTTGTGGCACAGGCTGCAAGGGACTCCTCCAGCCACCCCTGAGCAATTGGATGTGGCCCAGCTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 72 bp GGCCAGCAAGAGGGTGGGGCTGCCCAAAGATATGGGTaGTCAGGACCAAGGGTTGAAGATCAGGCTACTCTC +
Preference number: 6 (lower is better)
Translates to: GQQEGGAAQRYG*SGPRVEDQATL
Trigger: GAGAGTAGCCTGATCTTCAACCCTTGGTCCTGACCACCCATATCTTTGGGCAGCCCCACCCTCTTGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 72 bp CAGGAGCCACCGAAGTCCCTGGACGTTATTCACACTTaGCTGAGGTTACCTTTAGCACTGGGTGGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: QEPPKSLDVIHT*LRLPLALGGPG
Trigger: CCCAGGGCCACCCAGTGCTAAAGGTAACCTCAGCCAAGTGTGAATAACGTCCAGGGACTTCGGTGGCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 72 bp TCAACTCTGAGGAGGGTGCCATCACATCGATCGCTTTaGGTCCGTTGTCCTCCGAGAGGTGGGAACCGTTCC +
Preference number: 6 (lower is better)
Translates to: STLRRVPSHRSL*VRCPPRGGNRS
Trigger: GGAACGGTTCCCACCTCTCGGAGGACAACGGACCCAAAGCGATCGATGTGATGGCACCCTCCTCAGAGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478910.5
ENST00000482872.5
CDS CAA 72 bp GAGGAGGGTGCCATCACATCGATCGCTTTGGGTCCGTaGTCCTCCGAGAGGTGGGAACCGTTCCTTCTAGTC +
Preference number: 6 (lower is better)
Translates to: EEGAITSIALGP*SSERWEPFLLV
Trigger: GACTAGAAGGAACGGTTCCCACCTCTCGGAGGACAACGGACCCAAAGCGATCGATGTGATGGCACCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373913.7
ENST00000478910.5
ENST00000482872.5
ENST00000489701.5
CDS CAA 72 bp CTGCTTTCTGAGGAGGGTGCCATCACATCGATCGCTTaGGGTCCGTTGTCCTCCGAGAGGTGGGAACCGTTC +
Preference number: 6 (lower is better)
Translates to: LLSEEGAITSIA*GPLSSERWEPF
Trigger: GAACGGTTCCCACCTCTCGGAGGACAACGGACCCAAAGCGATCGATGTGATGGCACCCTCCTCAGAAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000489701.5
CDS CAA 72 bp GTCAACTCTGAGGAGGGTGCCATCACATCGATCGCTTaGGGTCCGTTGTCCTCCGAGAGGTGGGAACCGTTC +
Preference number: 6 (lower is better)
Translates to: VNSEEGAITSIA*GPLSSERWEPF
Trigger: GAACGGTTCCCACCTCTCGGAGGACAACGGACCCAAAGCGATCGATGTGATGGCACCCTCCTCAGAGTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478910.5
ENST00000482872.5
CDS CAA 72 bp CTTCCGATGTGGGCAGCGTTATTGCCGACCAGGAATTaGTCCCTGGACTTCCCCTCCGCACTGCTCCATGCT +
Preference number: 6 (lower is better)
Translates to: LPMWAALLPTRN*SLDFPSALLHA
Trigger: AGCATGGAGCAGTGCGGAGGGGAAGTCCAGGGACAAATTCCTGGTCGGCAATAACGCTGCCCACATCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477195.1
ENST00000489701.5
CDS CAA 72 bp AGGGAGAACTCCACTGGCTTCCGACTTCCAGGCCTGTaGGTGGAGAACAATGGTCGGGAAAGAGCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: RENSTGFRLPGL*VENNGRERAWL
Trigger: CAGCCAGGCTCTTTCCCGACCATTGTTCTCCACCAACAGGCCTGGAAGTCGGAAGCCAGTGGAGTTCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482872.5
CDS CAA 90 bp CCAAGGGTTCAGGGCATCCTCAGAAACTGGGGACTCTTCAGTCTCTaGGCCTTGTGGAGAGAAGTAGGGGCCAGGGAAGCTTTCTGGGAC +
Preference number: 6 (lower is better)
Translates to: PRVQGILRNWGLFSL*ALWREVGAREAFWD
Trigger: GTCCCAGAAAGCTTCCCTGGCCCCTACTTCTCTCCACAAGGCCAAGAGACTGAAGAGTCCCCAGTTTCTGAGGATGCCCTGAACCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CAA 90 bp GTCAACTCTGAGGAGGGTGCCATCACATCGATCGCTTTGGGTCCGTaGTCCTCCGAGAGGTGGGAACCGTTCCTTCTAGTCCTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: VNSEEGAITSIALGP*SSERWEPFLLVLSF
Trigger: GAAGGAGAGGACTAGAAGGAACGGTTCCCACCTCTCGGAGGACAACGGACCCAAAGCGATCGATGTGATGGCACCCTCCTCAGAGTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS GCA 72 bp TTCCAGTGCTTTGTTATCAGCTGGGCCACATCCAATTaGTCAGGGGTGGCTGGAGGAGTCCCTTGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: FQCFVISWATSN*SGVAGGVPCSL
Trigger: CAGGCTGCAAGGGACTCCTCCAGCCACCCCTGAGCAATTGGATGTGGCCCAGCTGATAACAAAGCACTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS GCA 72 bp GCCACATTTCCCCTCGGCAAAAGCCGGCTCAAGGAATaGAGCACCACTGGATCTCCAAGGAGCTGCAATGAG +
Preference number: 6 (lower is better)
Translates to: ATFPLGKSRLKE*STTGSPRSCNE
Trigger: CTCATTGCAGCTCCTTGGAGATCCAGTGGTGCTGCATTCCTTGAGCCGGCTTTTGCCGAGGGGAAATGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS GCA 72 bp GGGTGGTTTCTTCTCTTCCGATGTGGGCAGCGTTATTaGCGACCAGGAATTTGTCCCTGGACTTCCCCTCCG +
Preference number: 6 (lower is better)
Translates to: GWFLLFRCGQRY*RPGICPWTSPP
Trigger: CGGAGGGGAAGTCCAGGGACAAATTCCTGGTCGGCAATAACGCTGCCCACATCGGAAGAGAAGAAACCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477195.1
ENST00000489701.5
CDS CCA 72 bp GAGAAAGACCCCAACTTGGGACCTAGGAGCTCCCAGTaGATATGGGGAACACCCAGAAGAGGGAAAGCCCAG +
Preference number: 6 (lower is better)
Translates to: EKDPNLGPRSSQ*IWGTPRRGKAQ
Trigger: CTGGGCTTTCCCTCTTCTGGGTGTTCCCCATATCCACTGGGAGCTCCTAGGTCCCAAGTTGGGGTCTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS CCA 72 bp AGAGGAGCTCCTGAAGTCAGGGAGCTGAGGACATATTaGGGGGTCCCAAGGAGAAAGACCCCAACTTGGGAC +
Preference number: 6 (lower is better)
Translates to: RGAPEVRELRTY*GVPRRKTPTWD
Trigger: GTCCCAAGTTGGGGTCTTTCTCCTTGGGACCCCCCAATATGTCCTCAGCTCCCTGACTTCAGGAGCTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340491.8
CDS CCA 72 bp GGAGGCTCCTCTCAGATGACTTACAGCTTGAGTCATTaGCATCCTGGGTATCCGAGTCTGTGTCCCGTCGGG +
Preference number: 6 (lower is better)
Translates to: GGSSQMTYSLSH*HPGYPSLCPVG
Trigger: CCCGACGGGACACAGACTCGGATACCCAGGATGCCAATGACTCAAGCTGTAAGTCATCTGAGAGGAGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339266.10
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000478910.5
ENST00000479951.1
ENST00000482872.5
ENST00000489701.5
ENST00000495241.5
CDS CCA 72 bp ACATCGATCGCTTTGGGTCCGTTGTCCTCCGAGAGGTaGGAACCGTTCCTTCTAGTCCTCTCCTTCACACGC +
Preference number: 6 (lower is better)
Translates to: TSIALGPLSSER*EPFLLVLSFTR
Trigger: GCGTGTGAAGGAGAGGACTAGAAGGAACGGTTCCCACCTCTCGGAGGACAACGGACCCAAAGCGATCGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 72 bp GGCCTGTTGGTGGAGAACAATGGTCGGGAAAGAGCCTaGCTGATTACACAATGCCTCACACAGCCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: GLLVENNGRERA*LITQCLTQPSS
Trigger: GGAGGAGGGCTGTGTGAGGCATTGTGTAATCAGCCAGGCTCTTTCCCGACCATTGTTCTCCACCAACAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482872.5
CDS CCA 72 bp GAGGTTCTGGTGGGAAGAGGCACACCTTCTTCCCAATaGAAGACAACAGGACTGCCCACAGTCAGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: EVLVGRGTPSSQ*KTTGLPTVRVW
Trigger: CCAGACCCTGACTGTGGGCAGTCCTGTTGTCTTCCATTGGGAAGAAGGTGTGCCTCTTCCCACCAGAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS CAA 72 bp GTCCTCTCTTGTATTCCTATCGATGACAGTTTCCTTTaGGGGGCGGCCTCGGGGTGGGACTCAGAGCTGGTC +
Preference number: 6 (lower is better)
Translates to: VLSCIPIDDSFL*GAASGWDSELV
Trigger: GACCAGCTCTGAGTCCCACCCCGAGGCCGCCCCCAAAAGGAAACTGTCATCGATAGGAATACAAGAGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373913.7
ENST00000482872.5
ENST00000489701.5
ENST00000491207.5
CDS CAA 72 bp CAGGGCATCCTCAGAAACTGGGGACTCTTCAGTCTCTaGGCCTTGTGGAGAGAAGTAGGGGCCAGGGAAGCT +
Preference number: 6 (lower is better)
Translates to: QGILRNWGLFSL*ALWREVGAREA
Trigger: AGCTTCCCTGGCCCCTACTTCTCTCCACAAGGCCAAGAGACTGAAGAGTCCCCAGTTTCTGAGGATGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CAA 72 bp ACAGGAGCCACCGAAGTCCCTGGACGTTATTCACACTaGGCTGAGGTTACCTTTAGCACTGGGTGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: TGATEVPGRYSH*AEVTFSTGWPW
Trigger: CCAGGGCCACCCAGTGCTAAAGGTAACCTCAGCCAAGTGTGAATAACGTCCAGGGACTTCGGTGGCTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CAA 72 bp GGGGTGGTTTCTTCTCTTCCGATGTGGGCAGCGTTATaGCCGACCAGGAATTTGTCCCTGGACTTCCCCTCC +
Preference number: 6 (lower is better)
Translates to: GVVSSLPMWAAL*PTRNLSLDFPS
Trigger: GGAGGGGAAGTCCAGGGACAAATTCCTGGTCGGCAATAACGCTGCCCACATCGGAAGAGAAGAAACCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477195.1
ENST00000489701.5
CDS CAA 72 bp GAGCTGACTTGTATTCCTATCGATGACAGTTTCCTTTaGGGGGCGGCCTCGGGGTGGGACTCAGAGCTGGTC +
Preference number: 6 (lower is better)
Translates to: ELTCIPIDDSFL*GAASGWDSELV
Trigger: GACCAGCTCTGAGTCCCACCCCGAGGCCGCCCCCAAAAGGAAACTGTCATCGATAGGAATACAAGTCAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479951.1
CDS CAA 90 bp GTACAGTCCGGGAGGCTCCTCTCAGATGACTTACAGCTTGAGTCATaGGCATCCTGGGTATCCGAGTCTGTGTCCCGTCGGGAGGACATA +
Preference number: 6 (lower is better)
Translates to: VQSGRLLSDDLQLES*ASWVSESVSRREDI
Trigger: TATGTCCTCCCGACGGGACACAGACTCGGATACCCAGGATGCCAATGACTCAAGCTGTAAGTCATCTGAGAGGAGCCTCCCGGACTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339266.10
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000478910.5
ENST00000479951.1
ENST00000482872.5
ENST00000489701.5
ENST00000495241.5
CDS CAA 90 bp TTCCTTCTAGTCCTCTCTTGTATTCCTATCGATGACAGTTTCCTTTaGGGGGCGGCCTCGGGGTGGGACTCAGAGCTGGTCAGCGTCCCT +
Preference number: 6 (lower is better)
Translates to: FLLVLSCIPIDDSFL*GAASGWDSELVSVP
Trigger: AGGGACGCTGACCAGCTCTGAGTCCCACCCCGAGGCCGCCCCCAAAAGGAAACTGTCATCGATAGGAATACAAGAGAGGACTAGAAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373913.7
ENST00000482872.5
ENST00000489701.5
ENST00000491207.5
CDS CAA 90 bp CTGCTTTCTGAGGAGGGTGCCATCACATCGATCGCTTTGGGTCCGTaGTCCTCCGAGAGGTGGGAACCGTTCCTTCTAGTCCTCTCTTGT +
Preference number: 6 (lower is better)
Translates to: LLSEEGAITSIALGP*SSERWEPFLLVLSC
Trigger: ACAAGAGAGGACTAGAAGGAACGGTTCCCACCTCTCGGAGGACAACGGACCCAAAGCGATCGATGTGATGGCACCCTCCTCAGAAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373913.7
ENST00000489701.5
CDS CAA 90 bp GTTCAGGGCATCCTCAGAAACTGGGGACTCTTCAGTCTCTTGGCCTaGTGGAGAGAAGTAGGGGCCAGGGAAGCTTTCTGGGACAGGGAT +
Preference number: 6 (lower is better)
Translates to: VQGILRNWGLFSLLA*WREVGAREAFWDRD
Trigger: ATCCCTGTCCCAGAAAGCTTCCCTGGCCCCTACTTCTCTCCACAAGGCCAAGAGACTGAAGAGTCCCCAGTTTCTGAGGATGCCCTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CAA 90 bp CTGAATGCAGTCAACTCTGAGGAGGGTGCCATCACATCGATCGCTTaGGGTCCGTTGTCCTCCGAGAGGTGGGAACCGTTCCTTCTAGTC +
Preference number: 6 (lower is better)
Translates to: LNAVNSEEGAITSIA*GPLSSERWEPFLLV
Trigger: GACTAGAAGGAACGGTTCCCACCTCTCGGAGGACAACGGACCCAAAGCGATCGATGTGATGGCACCCTCCTCAGAGTTGACTGCATTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478910.5
ENST00000482872.5
CDS CAA 90 bp GTTTCTTCTCTTCCGATGTGGGCAGCGTTATTGCCGACCAGGAATTaGTCCCTGGACTTCCCCTCCGCACTGCTCCATGCTCACCTTCCT +
Preference number: 6 (lower is better)
Translates to: VSSLPMWAALLPTRN*SLDFPSALLHAHLP
Trigger: AGGAAGGTGAGCATGGAGCAGTGCGGAGGGGAAGTCCAGGGACAAATTCCTGGTCGGCAATAACGCTGCCCACATCGGAAGAGAAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477195.1
ENST00000489701.5
CDS CAA 90 bp GTCAACTCTGAGGAGGGTGCCATCACATCGATCGCTTTGGGTCCGTaGTCCTCCGAGAGGTGGGAACCGTTCCTTCTAGTCCTCTCTTGT +
Preference number: 6 (lower is better)
Translates to: VNSEEGAITSIALGP*SSERWEPFLLVLSC
Trigger: ACAAGAGAGGACTAGAAGGAACGGTTCCCACCTCTCGGAGGACAACGGACCCAAAGCGATCGATGTGATGGCACCCTCCTCAGAGTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482872.5
CDS GCA 72 bp GAGGCACACCTTCTTCCCAATGGAAGACAACAGGACTaGCCACAGTCAGGGTCTGGACAAAGGACTGACCCT +
Preference number: 6 (lower is better)
Translates to: EAHLLPNGRQQD*PQSGSGQRTDP
Trigger: AGGGTCAGTCCTTTGTCCAGACCCTGACTGTGGGCAGTCCTGTTGTCTTCCATTGGGAAGAAGGTGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS CCA 72 bp AAGTGGAAAGCTGTCACTCCCTCCACTCCTGTGAAGTaGAACAGGACAACAGTGATGCCCTGCGCCTGCCTT +
Preference number: 6 (lower is better)
Translates to: KWKAVTPSTPVK*NRTTVMPCACL
Trigger: AAGGCAGGCGCAGGGCATCACTGTTGTCCTGTTCCACTTCACAGGAGTGGAGGGAGTGACAGCTTTCCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 72 bp CTTGGATTTGGCTGGCTTCTTTGGGACCGGAGGGGGTaGTTTCTTCTCTTCCGATGTGGGCAGCGTTATTGC +
Preference number: 6 (lower is better)
Translates to: LGFGWLLWDRRG*FLLFRCGQRYC
Trigger: GCAATAACGCTGCCCACATCGGAAGAGAAGAAACCACCCCCTCCGGTCCCAAAGAAGCCAGCCAAATCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477195.1
ENST00000489701.5
CDS CCA 72 bp GTAGCTTTAGGAACCAGTAGCCGTAGCTTGAGTCATTaGCATCCTGGGTATCCGAGTCTGTGTCCCGTCGGG +
Preference number: 6 (lower is better)
Translates to: VALGTSSRSLSH*HPGYPSLCPVG
Trigger: CCCGACGGGACACAGACTCGGATACCCAGGATGCCAATGACTCAAGCTACGGCTACTGGTTCCTAAAGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497862.1
CDS CAA 72 bp CAGTCAACTTGTATTCCTATCGATGACAGTTTCCTTTaGGGGGCGGCCTCGGGGTGGGACTCAGAGCTGGTC +
Preference number: 6 (lower is better)
Translates to: QSTCIPIDDSFL*GAASGWDSELV
Trigger: GACCAGCTCTGAGTCCCACCCCGAGGCCGCCCCCAAAAGGAAACTGTCATCGATAGGAATACAAGTTGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339266.10
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
ENST00000479220.5
ENST00000482037.5
CDS CAA 90 bp CATTCAAGCTCCACTTTGTGTCCCACGCTCCTGCATTCCAGTGCTTaGTTATCAGCTGGGCCACATCCAATTGCTCAGGGGTGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: HSSSTLCPTLLHSSA*LSAGPHPIAQGWLE
Trigger: CTCCAGCCACCCCTGAGCAATTGGATGTGGCCCAGCTGATAACAAAGCACTGGAATGCAGGAGCGTGGGACACAAAGTGGAGCTTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CAA 90 bp GTAGTCCTAACTCTTAGGCTTTCCGGGAAGATAAGAGCGTCTGGTTaGGCCAGCAAGAGGGTGGGGCTGCCCAAAGATATGGGTGGTCAG +
Preference number: 6 (lower is better)
Translates to: VVLTLRLSGKIRASG*ASKRVGLPKDMGGQ
Trigger: CTGACCACCCATATCTTTGGGCAGCCCCACCCTCTTGCTGGCCAAACCAGACGCTCTTATCTTCCCGGAAAGCCTAAGAGTTAGGACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CAA 90 bp TACATAGGTTGCATTGCAGAAGCTAAGGCTGGGCCAGGCCTAGGCTaGGCATCACTCCTCATTTCTGGTACAGACACAACTGGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: YIGCIAEAKAGPGLG*ASLLISGTDTTGPS
Trigger: GGAGGGCCCAGTTGTGTCTGTACCAGAAATGAGGAGTGATGCCAAGCCTAGGCCTGGCCCAGCCTTAGCTTCTGCAATGCAACCTATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482037.5
CDS GCA 72 bp TGGGGTAGGGATGACACTGTCCATGAAGAGTGTGCATaGAGCATTCACGAGGTTCTGGTGGGAAGAGGCACA +
Preference number: 6 (lower is better)
Translates to: WGRDDTVHEECA*SIHEVLVGRGT
Trigger: TGTGCCTCTTCCCACCAGAACCTCGTGAATGCTGCATGCACACTCTTCATGGACAGTGTCATCCCTACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS CCA 72 bp TGGCTTCCGACTTCCAGGCCTGTTGGTGGAGAACAATaGTCGGGAAAGAGCCTGGCTGATTACACAATGCCT +
Preference number: 6 (lower is better)
Translates to: WLPTSRPVGGEQ*SGKSLADYTMP
Trigger: AGGCATTGTGTAATCAGCCAGGCTCTTTCCCGACCATTGTTCTCCACCAACAGGCCTGGAAGTCGGAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482872.5
CDS CAA 72 bp TCCACTTTGTGTCCCACGCTCCTGCATTCCAGTGCTTaGTTATCAGCTGGGCCACATCCAATTGCTCAGGGG +
Preference number: 6 (lower is better)
Translates to: STLCPTLLHSSA*LSAGPHPIAQG
Trigger: CCCCTGAGCAATTGGATGTGGCCCAGCTGATAACAAAGCACTGGAATGCAGGAGCGTGGGACACAAAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CAA 72 bp ACTCTTAGGCTTTCCGGGAAGATAAGAGCGTCTGGTTaGGCCAGCAAGAGGGTGGGGCTGCCCAAAGATATG +
Preference number: 6 (lower is better)
Translates to: TLRLSGKIRASG*ASKRVGLPKDM
Trigger: CATATCTTTGGGCAGCCCCACCCTCTTGCTGGCCAAACCAGACGCTCTTATCTTCCCGGAAAGCCTAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CAA 72 bp ATCCTCAGAAACTGGGGACTCTTCAGTCTCTTGGCCTaGTGGAGAGAAGTAGGGGCCAGGGAAGCTTTCTGG +
Preference number: 6 (lower is better)
Translates to: ILRNWGLFSLLA*WREVGAREAFW
Trigger: CCAGAAAGCTTCCCTGGCCCCTACTTCTCTCCACAAGGCCAAGAGACTGAAGAGTCCCCAGTTTCTGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CAA 90 bp TACATAGGTTGCATTGCAGAAGCTAAGGCTGGGCCAGGCCTAGGCTaGGCATCACTCCTCATTTCTGGTACAGACACAACTGGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: YIGCIAEAKAGPGLG*ASLLISGTDTTGPV
Trigger: CACAGGCCCAGTTGTGTCTGTACCAGAAATGAGGAGTGATGCCAAGCCTAGGCCTGGCCCAGCCTTAGCTTCTGCAATGCAACCTATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS TCA 72 bp AATGGTAGGCTAGACCCTGGTGGCAGGATTTGGACTTaGGCAGGCTCTTATCCAAGGTGGCTGAGGTCTTCT +
Preference number: 6 (lower is better)
Translates to: NGRLDPGGRIWT*AGSYPRWLRSS
Trigger: AGAAGACCTCAGCCACCTTGGATAAGAGCCTGCTCAAGTCCAAATCCTGCCACCAGGGTCTAGCCTACCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339266.10
ENST00000373907.6
ENST00000373913.7
CDS CCA 72 bp CTCTCAGATGACTTACAGCTTGAGTCATTGGCATCCTaGGTATCCGAGTCTGTGTCCCGTCGGGAGGACATA +
Preference number: 6 (lower is better)
Translates to: LSDDLQLESLAS*VSESVSRREDI
Trigger: TATGTCCTCCCGACGGGACACAGACTCGGATACCCAGGATGCCAATGACTCAAGCTGTAAGTCATCTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339266.10
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000478910.5
ENST00000479951.1
ENST00000482872.5
ENST00000489701.5
ENST00000495241.5
CDS CCA 72 bp ACATCGATCGCTTTGGGTCCGTTGTCCTCCGAGAGGTaGGAACCGTTCCTTCTAGTCCTCTCTTGTATTCCT +
Preference number: 6 (lower is better)
Translates to: TSIALGPLSSER*EPFLLVLSCIP
Trigger: AGGAATACAAGAGAGGACTAGAAGGAACGGTTCCCACCTCTCGGAGGACAACGGACCCAAAGCGATCGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373913.7
ENST00000482872.5
ENST00000489701.5
ENST00000491207.5
CDS CCA 72 bp CAGAGTCTCCTGGCCAACTCTCTCTCTGTTTATACATaGGGAAGTGGAAGCCTAGAGCTGCCTCTTGGAGGA +
Preference number: 6 (lower is better)
Translates to: QSLLANSLSVYT*GSGSLELPLGG
Trigger: TCCTCCAAGAGGCAGCTCTAGGCTTCCACTTCCCCATGTATAAACAGAGAGAGAGTTGGCCAGGAGACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 72 bp GTGTTTCTGAGAATCCCACCTGTGCAGCGCAGGGACTaGACACTTAAGAAGCCCAGAAAACAGCAGCAGAGT +
Preference number: 6 (lower is better)
Translates to: VFLRIPPVQRRD*TLKKPRKQQQS
Trigger: ACTCTGCTGCTGTTTTCTGGGCTTCTTAAGTGTCCAGTCCCTGCGCTGCACAGGTGGGATTCTCAGAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 72 bp AGGCATGATGAACCTGTGAAACAGGGAGAACTCCACTaGCTTCCGACTTCCAGGCCTGTTGGTGGAGAACAA +
Preference number: 6 (lower is better)
Translates to: RHDEPVKQGELH*LPTSRPVGGEQ
Trigger: TTGTTCTCCACCAACAGGCCTGGAAGTCGGAAGCCAGTGGAGTTCTCCCTGTTTCACAGGTTCATCATGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482872.5
CDS CAA 72 bp TACAGTCCGGGAGGCTCCTCTCAGATGACTTACAGCTaGAGTCATTGGCATCCTGGGTATCCGAGTCTGTGT +
Preference number: 6 (lower is better)
Translates to: YSPGGSSQMTYS*SHWHPGYPSLC
Trigger: ACACAGACTCGGATACCCAGGATGCCAATGACTCAAGCTGTAAGTCATCTGAGAGGAGCCTCCCGGACTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339266.10
ENST00000340491.8
ENST00000373907.6
ENST00000373913.7
ENST00000475894.5
ENST00000478910.5
ENST00000479951.1
ENST00000482872.5
ENST00000489701.5
ENST00000495241.5
CDS TCA 72 bp GGGTCTTCTTATACGCCACTAGGCATGATGAACCTGTaGAACAGGGAGAACTCCACTGGCTTCCGACTTCCA +
Preference number: 6 (lower is better)
Translates to: GSSYTPLGMMNL*NRENSTGFRLP
Trigger: TGGAAGTCGGAAGCCAGTGGAGTTCTCCCTGTTTCACAGGTTCATCATGCCTAGTGGCGTATAAGAAGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482872.5
CDS GCA 72 bp AAGCTCCACTTTGTGTCCCACGCTCCTGCATTCCAGTaGTTTGTTATCAGCTGGGCCACATCCAATTGCTCA +
Preference number: 6 (lower is better)
Translates to: KLHFVSHAPAFQ*FVISWATSNCS
Trigger: TGAGCAATTGGATGTGGCCCAGCTGATAACAAAGCACTGGAATGCAGGAGCGTGGGACACAAAGTGGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS GCA 72 bp TGTTCCATTCAAGCTCCACTTTGTGTCCCACGCTCCTaGATTCCAGTGCTTTGTTATCAGCTGGGCCACATC +
Preference number: 6 (lower is better)
Translates to: CSIQAPLCVPRS*IPVLCYQLGHI
Trigger: GATGTGGCCCAGCTGATAACAAAGCACTGGAATGCAGGAGCGTGGGACACAAAGTGGAGCTTGAATGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 72 bp TCCATGAAGAGTGTGCATGCAGCATTCACGAGGTTCTaGTGGGAAGAGGCACACCTTCTTCCCAATGGAAGA +
Preference number: 6 (lower is better)
Translates to: SMKSVHAAFTRF*WEEAHLLPNGR
Trigger: TCTTCCATTGGGAAGAAGGTGTGCCTCTTCCCACCAGAACCTCGTGAATGCTGCATGCACACTCTTCATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS CAA 72 bp GGGCTGCCCAAAGATATGGGTGGTCAGGACCAAGGGTaGAAGATCAGGCTACTCTCTGTGTTTCTGAGAATC +
Preference number: 6 (lower is better)
Translates to: GLPKDMGGQDQG*KIRLLSVFLRI
Trigger: GATTCTCAGAAACACAGAGAGTAGCCTGATCTTCAACCCTTGGTCCTGACCACCCATATCTTTGGGCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CAA 72 bp CTGGCCCAGGGACAGTTTCCACCAAGACCTGGACGTTaGTTTAGAGCAACTCTTGAAATCTATGGCCACCAG +
Preference number: 6 (lower is better)
Translates to: LAQGQFPPRPGR*FRATLEIYGHQ
Trigger: CTGGTGGCCATAGATTTCAAGAGTTGCTCTAAACAAACGTCCAGGTCTTGGTGGAAACTGTCCCTGGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS CCA 72 bp GGACTGGAATTTGGTAGCGGGACTGGGCTCCTCTTTTaGCACTGGCTGAATGCAGTCAACTTGTATTCCTAT +
Preference number: 6 (lower is better)
Translates to: GLEFGSGTGLLF*HWLNAVNLYSY
Trigger: ATAGGAATACAAGTTGACTGCATTCAGCCAGTGCCAAAAGAGGAGCCCAGTCCCGCTACCAAATTCCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339266.10
ENST00000340491.8
ENST00000373907.6
ENST00000475894.5
ENST00000479220.5
ENST00000482037.5
CDS CCA 72 bp ATGAAGAGTGTGCATGCAGCATTCACGAGGTTCTGGTaGGAAGAGGCACACCTTCTTCCCAATGGAAGACAA +
Preference number: 6 (lower is better)
Translates to: MKSVHAAFTRFW*EEAHLLPNGRQ
Trigger: TTGTCTTCCATTGGGAAGAAGGTGTGCCTCTTCCCACCAGAACCTCGTGAATGCTGCATGCACACTCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489701.5
CDS CAA 72 bp CTCAGTGAGCCTTCTCTGTTCCATTCAAGCTCCACTTaGTGTCCCACGCTCCTGCATTCCAGTGCTTTGTTA +
Preference number: 6 (lower is better)
Translates to: LSEPSLFHSSST*CPTLLHSSALL
Trigger: TAACAAAGCACTGGAATGCAGGAGCGTGGGACACAAAGTGGAGCTTGAATGGAACAGAGAAGGCTCACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CAA 90 bp AAGAAATTGCTCAGTGAGCCTTCTCTGTTCCATTCAAGCTCCACTTaGTGTCCCACGCTCCTGCATTCCAGTGCTTTGTTATCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: KKLLSEPSLFHSSST*CPTLLHSSALLSAG
Trigger: CCCAGCTGATAACAAAGCACTGGAATGCAGGAGCGTGGGACACAAAGTGGAGCTTGAATGGAACAGAGAAGGCTCACTGAGCAATTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 72 bp CACTTAAGAAGCCCAGAAAACAGCAGCAGAGTCTCCTaGCCAACTCTCTCTCTGTTTATACATGGGGAAGTG +
Preference number: 6 (lower is better)
Translates to: HLRSPENSSRVS*PTLSLFIHGEV
Trigger: CACTTCCCCATGTATAAACAGAGAGAGAGTTGGCCAGGAGACTCTGCTGCTGTTTTCTGGGCTTCTTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS TCA 72 bp CCTAAGAGAGTCCTTATCCCGGTGTCATTTTCTGGGTaGAAGGAATCAAGGGTAGTCCTAACTCTTAGGCTT +
Preference number: 6 (lower is better)
Translates to: PKRVLIPVSFSG*KESRVVLTLRL
Trigger: AAGCCTAAGAGTTAGGACTACCCTTGATTCCTTTCACCCAGAAAATGACACCGGGATAAGGACTCTCTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS CCA 72 bp TTATACATGGGGAAGTGGAAGCCTAGAGCTGCCTCTTaGAGGAAACAAATACAGGCAACTGCAAGAAATTGC +
Preference number: 6 (lower is better)
Translates to: LYMGKWKPRAAS*RKQIQATARNC
Trigger: GCAATTTCTTGCAGTTGCCTGTATTTGTTTCCTCCAAGAGGCAGCTCTAGGCTTCCACTTCCCCATGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478910.5
CDS TCA 72 bp GGAAACAAATACAGGCAACTGCAAGAAATTGCTCAGTaGGCCTTCTCTGTTCCATTCAAGCTCCACTTTGTG +
Preference number: 6 (lower is better)
Translates to: GNKYRQLQEIAQ*AFSVPFKLHFV
Trigger: CACAAAGTGGAGCTTGAATGGAACAGAGAAGGCTCACTGAGCAATTTCTTGCAGTTGCCTGTATTTGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478910.5