RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DLGAP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000116544

Ensembl transcript IDs: ENST00000235180.4, ENST00000373347.6, ENST00000495979.1

Found 315 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGAAACCCACGAGAGTGTaGCGGGCCCGGGGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMKPTRV*RARGPG
Trigger: CCCCGGCCCCCGGGCCCGTCACACTCTCGTGGGTTT...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
3UTR-3UTR TCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGGCAGGGGATCCAGGTaGGGGGCGCAGGGCGGAGAG +
Preference number: 2 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMGRGSR*GAQGGE
Trigger: CTCTCCGCCCTGCGCCCCTCACCTGGATCCCCTGCC...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
3UTR-3UTR CCA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCGGTGTACAGTACGGGTaGAGAACCGCGGGCCCGGGC +
Preference number: 2 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGGVQYG*RTAGPG
Trigger: GCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACC...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
3UTR-3UTR TCA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGGCCCGCGTTCACAGTaGCCTCGACGCTGGGTGTAC +
Preference number: 2 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGGPRSQ*PRRWVY
Trigger: GTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCC...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
3UTR CCA 72 bp GAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGGTaGGGACAAAGCGTCGGACCAGGTGGGCAGGGGATC +
Preference number: 3 (lower is better)
Translates to: ERMAEMVPMGRR*GQSVGPGGQGI
Trigger: GATCCCCTGCCCACCTGGTCCGACGCTTTGTCCCCACCTCCTCCCCATGGGCACCATCTCTGCCATTCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTAAAACCCACGAGAGTGTaGCGGGCCCGGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVKPTRV*RARGPG
Trigger: CCCCGGCCCCCGGGCCCGTCACACTCTCGTGGGTTT...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTAGGCAGGGGATCCAGGTaGGGGGCGCAGGGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVGRGSR*GAQGGE
Trigger: CTCTCCGCCCTGCGCCCCTCACCTGGATCCCCTGCC...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGCGGGCTGGGCGGGGATaGCTGCCTCGGTCGCCATGG +
Preference number: 4 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGRAGRG*LPRSPW
Trigger: CCATGGCGACCGAGGCAGCCATCCCCGCCCAGCCCG...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGCAGGAGCCCCTTGCCTaGCCCGGCCCCCGGGTATCC +
Preference number: 4 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGQEPLA*PGPRVS
Trigger: GGATACCCGGGGGCCGGGCCAGGCAAGGGGCTCCTG...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTAGTGTGCGCGCACCCATaGCGGGGCCGTCCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVVCAHP*RGRPAR
Trigger: ACGGGCTGGACGGCCCCGCCATGGGTGCGCGCACAC...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACGGGCGACCCATCGGTaGCCGGCGGCTCGTACGGCA +
Preference number: 4 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVRATHR*PAARTA
Trigger: TGCCGTACGAGCCGCCGGCCACCGATGGGTCGCCCG...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCCCCGGGCCCTGCCCCTaGTGGCCCTCGCTGGTATGG +
Preference number: 4 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGPGPCP*WPSLVW
Trigger: CCATACCAGCGAGGGCCAGCAGGGGCAGGGCCCGGG...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGCTCACTGCGGGGCTCTaGGGCAGTGCCCGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LDAGCTVRVENRGPGPGWLTAGL*GSARPW
Trigger: CCAGGGACGGGCACTGCCCCAGAGCCCCGCAGTGAG...CCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGCTCACTGCGGGGCTCTaGGGCAGTGCCCGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGLTAGL*GSARPW
Trigger: CCAGGGACGGGCACTGCCCCAGAGCCCCGCAGTGAG...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGGAGCCGGGCCTCCCTaGGACAGCGGCAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMGAGPP*DSGRGS
Trigger: GCTACCCCTGCCGCTGTCTCAGGGAGGCCCGGCTCC...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGCCCTCGGCCGCCGTaGAGCTCTCGTGCGCGGAGT +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGGPRPP*SSRARS
Trigger: ACTCCGCGCACGAGAGCTTCACGGCGGCCGAGGGCC...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGCCCTCGGCCGCCGTaGAGCTCTCGTGCGCGGAGT +
Preference number: 4 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWGPRPP*SSRARS
Trigger: ACTCCGCGCACGAGAGCTTCACGGCGGCCGAGGGCC...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGAAAACCCACGAGAGTGTaGCGGGCCCGGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRKPTRV*RARGPG
Trigger: CCCCGGCCCCCGGGCCCGTCACACTCTCGTGGGTTT...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGACGCAGAGCCCAGATaGGGGACCCGGCCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGDAEPR*GTRPGL
Trigger: CAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGTC...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCCGCTTGCGCGCTTCCTaGCGCTGCCGGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGRLRAS*RCRSTE
Trigger: CTCCGTGGACCGGCAGCGGCAGGAAGCGCGCAAGCG...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGCGGGCTGGGCGGGGATaGCTGCCTCGGTCGCCATGG +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMRAGRG*LPRSPW
Trigger: CCATGGCGACCGAGGCAGCCATCCCCGCCCAGCCCG...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTAGTCAGCAAAGCGGGCTaGGCGGGGATGGCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVVSKAG*AGMAAS
Trigger: CGAGGCAGCCATCCCCGCCCAGCCCGCTTTGCTGAC...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGGCAGGTATGGGGCCCTaGCAGCAGGGCCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGAGMGP*QQGPRP
Trigger: TGGACGTGGGCCCTGCTGCCAGGGCCCCATACCTGC...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCGGAGCCCAGCAGGTATaGGGCCCTGGCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGGAQQV*GPGSRA
Trigger: GGCCCTGCTGCCAGGGCCCCATACCTGCTGGGCTCC...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGAAACCCCGGCCCCCGCTaGCCCTCCCTCAGGGCCTAC +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRNPGPR*PSLRAY
Trigger: GTAGGCCCTGAGGGAGGGCCAGCGGGGGCCGGGGTT...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGAACCCCGGCCCCCGCTaGCCCTCCCTCAGGGCCTAC +
Preference number: 4 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWNPGPR*PSLRAY
Trigger: GTAGGCCCTGAGGGAGGGCCAGCGGGGGCCGGGGTT...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCGGACCCGGCCCGGCCTaGCCCGTGGGGGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGGPGPA*PVGERM
Trigger: CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCC...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGTGCTGCTCTGGGCGGTaGTGGAGATGCGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMCCSGR*WRCGAG
Trigger: CCCCGCCCCGCATCTCCATCACCGCCCAGAGCAGCA...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGCTGCTCTGGGCGGTaGTGGAGATGCGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRCCSGR*WRCGAG
Trigger: CCCCGCCCCGCATCTCCATCACCGCCCAGAGCAGCA...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGACCGTGCGGAAGACTaGGTAGGTGGGGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGDRAED*VGGGPG
Trigger: CCCCGGGCCCCCACCTACTCAGTCTTCCGCACGGTC...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGACCGTGCGGAAGACTaGGTAGGTGGGGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPDRAED*VGGGPG
Trigger: CCCCGGGCCCCCACCTACTCAGTCTTCCGCACGGTC...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGACGCAGAGCCCAGATaGGGGACCCGGCCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGDAEPR*GTRPGL
Trigger: CAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGTC...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGAGCGCCAACTCCAGTGTaGGCGCACCCATGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRAPTPV*AHPWRG
Trigger: GCCCCGCCATGGGTGCGCGCACACTGGAGTTGGCGC...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGCGCCAACTCCAGTGTaGGCGCACCCATGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGAPTPV*AHPWRG
Trigger: GCCCCGCCATGGGTGCGCGCACACTGGAGTTGGCGC...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGACACCGTGGCCAGGCCTaGCAGGCCCTCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRHRGQA*QALQLQ
Trigger: CTGGAGCTGGAGGGCCTGGCAGGCCTGGCCACGGTG...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGACGCGCTTCCTGCCGCTaGCGGTCCACGGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRRASCR*RSTESR
Trigger: CCTGGACTCCGTGGACCGGCAGCGGCAGGAAGCGCG...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGCGCGCTTCCTGCCGCTaGCGGTCCACGGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPRASCR*RSTESR
Trigger: CCTGGACTCCGTGGACCGGCAGCGGCAGGAAGCGCG...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp CCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGCCGCCAGGAGCCGCTTaGGCGCTTCCTGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: PGLARGGKNGRDGAHGEEPPGAA*ALPAAA
Trigger: GGCAGCGGCAGGAAGCGCGCAAGCGGCTCCTGGCGG...CTCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp ACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGCCGCCAGGAGCCGCTTaGGCGCTTCCTGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: TGRPAFTVTSTLGVQYGWPPGAA*ALPAAA
Trigger: GGCAGCGGCAGGAAGCGCGCAAGCGGCTCCTGGCGG...CCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGAGCCCAGCAGGTATaGGGCCCTGGCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPGAQQV*GPGSRA
Trigger: GGCCCTGCTGCCAGGGCCCCATACCTGCTGGGCTCC...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGGTGTGCGCGCACCCATaGCGGGGCCGTCCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: PGLARGGKNGRDGAHGEEVCAHP*RGRPAR
Trigger: ACGGGCTGGACGGCCCCGCCATGGGTGCGCGCACAC...CTCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGCGGGCGACCCATCGGTaGCCGGCGGCTCGTACGGCA +
Preference number: 4 (lower is better)
Translates to: PGLARGGKNGRDGAHGEERATHR*PAARTA
Trigger: TGCCGTACGAGCCGCCGGCCACCGATGGGTCGCCCG...CTCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGGACCCGGCCCGGCCTaGCCCGTGGGGGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMGPGPA*PVGERM
Trigger: CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCC...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGGAGCCCCTGGGAGGGTaGGGCGGGCTCCTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PGLARGGKNGRDGAHGEEEPLGG*GGLLGR
Trigger: CCTGCCTAGGAGCCCGCCCCACCCTCCCAGGGGCTC...CTCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGCCCTGGTCCTGGGTTaGTCCAGCCACTGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LDAGCTVRVENRGPGPGWALVLG*SSHCGP
Trigger: GGGACCACAGTGGCTGGACCAACCCAGGACCAGGGC...CCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGCAGGCGCCCTGGTCCTaGGTTGGTCCAGCCACTGTG +
Preference number: 4 (lower is better)
Translates to: LDAGCTVRVENRGPGPGWQAPWS*VGPATV
Trigger: CACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTG...CCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGAGGCCCAGGCGCCCTaGTCCTGGGTTGGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGEAQAP*SWVGPA
Trigger: GGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTC...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGAGAGGCCCAGGCGCCCTaGTCCTGGGTTGGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQREAQAP*SWVGPA
Trigger: GGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTC...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGCGCCCGAGCGCCCCTTaGAGCTCAAGTCCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPRPSAP*SSSPGR
Trigger: CCTACCGGGACTTGAGCTTCAAGGGGCGCTCGGGCG...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGCATCCCGGCCCTGGCTaGCCATCATGGTATGCCAGG +
Preference number: 4 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGHPGPG*PSWYAR
Trigger: CCTGGCATACCATGATGGTCAGCCAGGGCCGGGATG...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTAGTGGGACACAGCAGTTaGTCCTGGCCTGGTCCACGC +
Preference number: 4 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVVGHSS*SWPGPR
Trigger: GCGTGGACCAGGCCAGGATCAACTGCTGTGTCCCAC...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp CTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGTGGGACACAGCAGTTaGTCCTGGCCTGGTCCACGC +
Preference number: 4 (lower is better)
Translates to: LDAGCTVRVENRGPGPGWVGHSS*SWPGPR
Trigger: GCGTGGACCAGGCCAGGATCAACTGCTGTGTCCCAC...CCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp CTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGTCGGGGAGGCTACGTaGACCGCGCTCTATCCAGGA +
Preference number: 4 (lower is better)
Translates to: LDAGCTVRVENRGPGPGWVGEAT*TALYPG
Trigger: TCCTGGATAGAGCGCGGTTCACGTAGCCTCCCCGAC...CCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGTTGCTCCTCTTGCCGTaGCGGGACTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGLLLLP*RDWWWW
Trigger: CCACCACCACCAGTCCCGGCACGGCAAGAGGAGCAA...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGAGTGGACTTGGCCTGGTaGCGCCCATCCCCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRVDLAW*RPSPLR
Trigger: CCGCAAGGGGGATGGGCGGCACCAGGCCAAGTCCAC...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGTGGACTTGGCCTGGTaGCGCCCATCCCCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMVDLAW*RPSPLR
Trigger: CCGCAAGGGGGATGGGCGGCACCAGGCCAAGTCCAC...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp ACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGCACCGTGGCCAGGCCTaGCAGGCCCTCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TGRPAFTVTSTLGVQYGWHRGQA*QALQLQ
Trigger: CTGGAGCTGGAGGGCCTGGCAGGCCTGGCCACGGTG...CCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp CCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGCGCTTGCGCGCTTCCTaGCGCTGCCGGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: PGLARGGKNGRDGAHGEERLRAS*RCRSTE
Trigger: CTCCGTGGACCGGCAGCGGCAGGAAGCGCGCAAGCG...CTCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGGTATGGGGCCCTaGCAGCAGGGCCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMAGMGP*QQGPRP
Trigger: TGGACGTGGGCCCTGCTGCCAGGGCCCCATACCTGC...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGTCCTGGCTTTGGCCTTaGTCTCCGGACCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LDAGCTVRVENRGPGPGWSWLWP*SPDPGA
Trigger: GGCTCCTGGGTCCGGAGACCAAGGCCAAAGCCAGGA...CCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTAGAGTCGGTGCTGCTCTaGGCGGTGATGGAGATGCGG +
Preference number: 4 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVESVLL*AVMEMR
Trigger: CCGCATCTCCATCACCGCCCAGAGCAGCACCGACTC...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGCGGCTCGTACGGCAGTaGGTAGCCCTCGCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWRLVRQ*VALAVG
Trigger: GCCTACCGCGAGGGCTACCCACTGCCGTACGAGCCG...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGCGGCTCGTACGGCAGTaGGTAGCCCTCGCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPRLVRQ*VALAVG
Trigger: GCCTACCGCGAGGGCTACCCACTGCCGTACGAGCCG...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGTGTACAGTACGGGTaGAGAACCGCGGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWGVQYG*RTAGPG
Trigger: GCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACC...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGTGTACAGTACGGGTaGAGAACCGCGGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGGVQYG*RTAGPG
Trigger: GCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACC...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGAGCCACTGTGGTCCCTaGGCCCAGTGGGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWSHCGP*AQWAEG
Trigger: GCCCTCTGCCCACTGGGCCCAGGGACCACAGTGGCT...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAAGGAGCGACGGGTGGTaGAGCGTCGGGCGACTGCTT +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGRSDGW*SVGRLL
Trigger: AAGCAGTCGCCCGACGCTTCACCACCCGTCGCTCCT...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGAGGAGCGACGGGTGGTaGAGCGTCGGGCGACTGCTT +
Preference number: 4 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWRSDGW*SVGRLL
Trigger: AAGCAGTCGCCCGACGCTTCACCACCCGTCGCTCCT...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp CGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGGAGCCGGGCCTCCCTaGGACAGCGGCAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: RPAFTVTSTLGVQYGWRTGAGPP*DSGRGS
Trigger: GCTACCCCTGCCGCTGTCTCAGGGAGGCCCGGCTCC...GGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCGTCGGGGAGGCTACGTaGACCGCGCTCTATCCAGGA +
Preference number: 4 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGVGEAT*TALYPG
Trigger: TCCTGGATAGAGCGCGGTTCACGTAGCCTCCCCGAC...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGGCCCGCGTTCACAGTaGCCTCGACGCTGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMGPRSQ*PRRWVY
Trigger: GTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCC...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp CGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGGCAGGGGATCCAGGTaGGGGGCGCAGGGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: RPAFTVTSTLGVQYGWRTGRGSR*GAQGGE
Trigger: CTCTCCGCCCTGCGCCCCTCACCTGGATCCCCTGCC...GGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGAAGGCTCAGGACCACTaGATCCTGGCCCGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMKAQDH*ILARLG
Trigger: CCCGAGCCGGGCCAGGATTCAGTGGTCCTGAGCCTT...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373347.6
CDS-3UTR GCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGCTGGGCGGGGATGGCTaGCTCGGTCGCCATGGTAAC +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMLGGDG*LGRHGN
Trigger: GTTACCATGGCGACCGAGGCAGCCATCCCCGCCCAG...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGACTGGGCGGGGATGGCTaGCTCGGTCGCCATGGTAAC +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGLGGDG*LGRHGN
Trigger: GTTACCATGGCGACCGAGGCAGCCATCCCCGCCCAG...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTATGCTCTTGCTCCTCTTaGCGTGCCGGGACTGGTGGT +
Preference number: 4 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVCSCSS*RAGTGG
Trigger: ACCACCAGTCCCGGCACGGCAAGAGGAGCAAGAGCA...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCCGCCCATCCCCCTTaGGGTCCTTGCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMAAHPP*GPCSCS
Trigger: GGAGCAAGAGCAAGGACCGCAAGGGGGATGGGCGGC...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGAGCCGCCCATCCCCCTTaGGGTCCTTGCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRAAHPP*GPCSCS
Trigger: GGAGCAAGAGCAAGGACCGCAAGGGGGATGGGCGGC...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGAGCCGTGAAGCTCTCGTaGGCGGAGTCGGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRAVKLS*AESVLL
Trigger: GAGCAGCACCGACTCCGCGCACGAGAGCTTCACGGC...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp CTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGAGCTCCAGGTCTGCCTaGACGCCAGCCGTCACACTA +
Preference number: 4 (lower is better)
Translates to: LDAGCTVRVENRGPGPGWSSRSA*TPAVTL
Trigger: TAGTGTGACGGCTGGCGTGCAGGCAGACCTGGAGCT...CCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAAGAAGCGGGGCTCGGTaGAGAAGGCCTCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGRSGAR*RRPPWS
Trigger: GCTCCAGGGAGGCCTTCTCCACCGAGCCCCGCTTCT...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGTGTCGAAGGGGCCCTaGCCAGGGTACATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMVSKGP*PGYILG
Trigger: CCCCAGGATGTACCCTGGCCAGGGCCCCTTCGACAC...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGACCTGTGGACTTGGCCTaGTGCCGCCCATCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGPVDLA*CRPSPL
Trigger: CAAGGGGGATGGGCGGCACCAGGCCAAGTCCACAGG...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGCCTGTGGACTTGGCCTaGTGCCGCCCATCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPPVDLA*CRPSPL
Trigger: CAAGGGGGATGGGCGGCACCAGGCCAAGTCCACAGG...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCCAGGAGCCCCTTGCCTaGCCCGGCCCCCGGGTATCC +
Preference number: 4 (lower is better)
Translates to: RPAFTVTSTLGVQYGWRTQEPLA*PGPRVS
Trigger: GGATACCCGGGGGCCGGGCCAGGCAAGGGGCTCCTG...GGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTTGATCCTGGCCTaGTCCACGCTGGAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVQLILA*STLEER
Trigger: TCGCTCCTCCAGCGTGGACCAGGCCAGGATCAACTG...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGATGGAGCTCCGGGGGTaGATCCGGGGTGGGACACAG +
Preference number: 4 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWMELRG*IRGGTQ
Trigger: CTGTGTCCCACCCCGGATCCACCCCCGGAGCTCCAT...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGAGGCTGTAGCCAGGGATaGAGCTCCGGGGGTGGATCC +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRGCSQG*SSGGGS
Trigger: GGATCCACCCCCGGAGCTCCATCCCTGGCTACAGCC...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGACCACCTGCACCCCAATaGACGGCCGCCACTTCCGCT +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGPPAPQ*TAATSA
Trigger: AGCGGAAGTGGCGGCCGTCCATTGGGGTGCAGGTGG...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGGCCTTGTCTTCTGTaGCCACCGTGGCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPGPCLL*PPWPGL
Trigger: CAGGCCTGGCCACGGTGGCCACAGAAGACAAGGCCC...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGGCCTTGTCTTCTGTaGCCACCGTGGCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWGPCLL*PPWPGL
Trigger: CAGGCCTGGCCACGGTGGCCACAGAAGACAAGGCCC...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGGGAAGACTGAGTAGGTaGGGGCCCGGGGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PGLARGGKNGRDGAHGEEGRLSR*GPGAQA
Trigger: AGCCTGGGCCCCGGGCCCCCACCTACTCAGTCTTCC...CTCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTAAAACCCGCCAGGTCCTaGAAGGTGGGCACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVKPARS*KVGTGN
Trigger: GTTCCCTGTGCCCACCTTCCAGGACCTGGCGGGTTT...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGCCGCAGGGGCTTCTTTaGTATCGGCGGAGGGACCTT +
Preference number: 4 (lower is better)
Translates to: LDAGCTVRVENRGPGPGWPQGLL*YRRRDL
Trigger: AAGGTCCCTCCGCCGATACCAAAGAAGCCCCTGCGG...CCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGCCGCAGGGGCTTCTTTaGTATCGGCGGAGGGACCTT +
Preference number: 4 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGPQGLL*YRRRDL
Trigger: AAGGTCCCTCCGCCGATACCAAAGAAGCCCCTGCGG...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCCCGGCCTGGCCCGTaGGGGAAAGAATGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMARPGP*GKEWQR
Trigger: TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGCCCTGGTCCTGGGTTaGTCCAGCCACTGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWALVLG*SSHCGP
Trigger: GGGACCACAGTGGCTGGACCAACCCAGGACCAGGGC...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGGACCACTGAATCCTaGCCCGGCTCGGGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: TGRPAFTVTSTLGVQYGWRTTES*PGSGSG
Trigger: GCCGGAGCCCGAGCCGGGCCAGGATTCAGTGGTCCT...CCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373347.6
CDS-3UTR TCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAAGGCAGTCGTCGTCTTaGGAGCAGCCGGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGRQSSS*EQPAWM
Trigger: CATCCAGGCCGGCTGCTCTCAAGACGACGACTGCCT...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp CTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGAAAAGCCACGAAGCTTaGTCCCCACGAAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LDAGCTVRVENRGPGPGWKSHEA*SPRSPA
Trigger: GGCTGGGCTTCGTGGGGATCAAGCTTCGTGGCTTTT...CCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp CTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGGGCCCACGTCCATATaGTGTTGGTCAGCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: LDAGCTVRVENRGPGPGWGPTSI*CWSAKR
Trigger: CCGCTTTGCTGACCAACAGCATATGGACGTGGGCCC...CCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGTTGCTCCTCTTGCCGTaGCGGGACTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPLLLLP*RDWWWW
Trigger: CCACCACCACCAGTCCCGGCACGGCAAGAGGAGCAA...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGGAAGCGTCGGGCGACTaGTTTGGGAGATGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGEASGD*FGRCLG
Trigger: CCCAAGACATCTCCCAAAGCAGTCGCCCGACGCTTC...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGCCGTGAAGCTCTCGTaGGCGGAGTCGGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGAVKLS*AESVLL
Trigger: GAGCAGCACCGACTCCGCGCACGAGAGCTTCACGGC...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGAGATCGTCTCCACCTaGACCCCAATGGACGGCCGC +
Preference number: 4 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWEIVST*TPMDGR
Trigger: GCGGCCGTCCATTGGGGTGCAGGTGGAGACGATCTC...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGATGGGGCTCAGAGGCGTaGCTCTGGAAGGAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGWGSEA*LWKERP
Trigger: TGGACGCTCCTTCCAGAGGCACGCCTCTGAGCCCCA...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGTGGGGCTCAGAGGCGTaGCTCTGGAAGGAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWWGSEA*LWKERP
Trigger: TGGACGCTCCTTCCAGAGGCACGCCTCTGAGCCCCA...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCGAATGGCAGAGATGGTaGCCATGGGGAGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGEWQRW*PWGGGG
Trigger: CCCACCTCCTCCCCATGGGCACCATCTCTGCCATTC...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAAGCGGGGCTCGGTaGAGAAGGCCTCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TGRPAFTVTSTLGVQYGWRSGAR*RRPPWS
Trigger: GCTCCAGGGAGGCCTTCTCCACCGAGCCCCGCTTCT...CCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGGCCAGGGTACATCCTaGGGAAGGTGCTGCTACCCC +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMGQGTS*GRCCYP
Trigger: GGGGTAGCAGCACCTTCCCCAGGATGTACCCTGGCC...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGGTGTCGAAGGGGCCCTaGCCAGGGTACATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PGLARGGKNGRDGAHGEEVSKGP*PGYILG
Trigger: CCCCAGGATGTACCCTGGCCAGGGCCCCTTCGACAC...CTCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGAGGCACCCTTGCCCTGTaGGTGGCCCACACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRGTLAL*VAHTVF
Trigger: GAAGACTGTGTGGGCCACCCACAGGGCAAGGGTGCC...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACCTGCTGGCCCTCGCTaGTATGGTAGTGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVPAGPR*YGSVWK
Trigger: CTTCCACACACTACCATACCAGCGAGGGCCAGCAGG...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGGGCGCCTCCAGAGAGTaGGACTTGGCAAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGGASRE*DLAKSF
Trigger: GAAGCTCTTTGCCAAGTCCCACTCTCTGGAGGCGCC...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGACCGGTAGGACCCATCTaGACCCTCCAGGCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRPVGPI*TLQAEG
Trigger: CCCTTCTGCCTGGAGGGTCCAGATGGGTCCTACCGG...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATCCTGGCTTTGGCCTTaGTCTCCGGACCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRSWLWP*SPDPGA
Trigger: GGCTCCTGGGTCCGGAGACCAAGGCCAAAGCCAGGA...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGCCACCTGCACCCCAATaGACGGCCGCCACTTCCGCT +
Preference number: 4 (lower is better)
Translates to: TGRPAFTVTSTLGVQYGWPPAPQ*TAATSA
Trigger: AGCGGAAGTGGCGGCCGTCCATTGGGGTGCAGGTGG...CCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGTGCACGCCAATAGAGTaGAACTCCCTCCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGCTPIE*NSLRLL
Trigger: CAGGAGCCGGAGGGAGTTCCACTCTATTGGCGTGCA...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGCACTGGCCCTGCGTGTaGACCGTGCGGAAGACTGAG +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMHWPCV*TVRKTE
Trigger: CTCAGTCTTCCGCACGGTCCACACGCAGGGCCAGTG...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGACACTGGCCCTGCGTGTaGACCGTGCGGAAGACTGAG +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGHWPCV*TVRKTE
Trigger: CTCAGTCTTCCGCACGGTCCACACGCAGGGCCAGTG...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGCCAGGTCCTGGAAGGTaGGCACAGGGAACGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPPGPGR*AQGTQW
Trigger: CCACTGCGTTCCCTGTGCCCACCTTCCAGGACCTGG...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGCCAGGTCCTGGAAGGTaGGCACAGGGAACGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMPGPGR*AQGTQW
Trigger: CCACTGCGTTCCCTGTGCCCACCTTCCAGGACCTGG...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGGGGTCACATCCTCGATaGAGAGCTGTAGGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGGSHPR*RAVGGP
Trigger: GGGACCTCCTACAGCTCTCCATCGAGGATGTGACCC...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGCCCATGGGGAGGAGGTaGGGACAAAGCGTCGGACCA +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMPMGRR*GQSVGP
Trigger: TGGTCCGACGCTTTGTCCCCACCTCCTCCCCATGGG...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGCAGGCGCCCTGGTCCTaGGTTGGTCCAGCCACTGTG +
Preference number: 4 (lower is better)
Translates to: TGRPAFTVTSTLGVQYGWQAPWS*VGPATV
Trigger: CACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTG...CCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGCCAGGCACTTCGCTTaGCCGACTGTCCATCCAGTG +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPARHFA*PTVHPV
Trigger: CACTGGATGGACAGTCGGTCAAGCGAAGTGCCTGGC...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp CCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGAGGCAGTCGTCGTCTTaGGAGCAGCCGGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: PGLARGGKNGRDGAHGEERQSSS*EQPAWM
Trigger: CATCCAGGCCGGCTGCTCTCAAGACGACGACTGCCT...CTCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTAAGCCGGAAGAACTGCTaGACCTTCTGGGACAGGAGA +
Preference number: 4 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVSRKNC*TFWDRR
Trigger: TCTCCTGTCCCAGAAGGTTCAGCAGTTCTTCCGGCT...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGGTAGCTCCAGGAACTTaGGGGTCACATCCTCGATGG +
Preference number: 4 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGVAPGT*GSHPRW
Trigger: CCATCGAGGATGTGACCCTCAAGTTCCTGGAGCTAC...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp ACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGGAGATCGTCTCCACCTaGACCCCAATGGACGGCCGC +
Preference number: 4 (lower is better)
Translates to: TGRPAFTVTSTLGVQYGWEIVST*TPMDGR
Trigger: GCGGCCGTCCATTGGGGTGCAGGTGGAGACGATCTC...CCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTAGGAGCGCTTGAACCTTaGTCGCCTCTTGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVGALEP*SPLVLF
Trigger: GAAGAGGACAAGAGGCGAGCAAGGTTCAAGCGCTCC...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGCCTGCGTGTGGACCGTaGGGAAGACTGAGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWPACGP*GRLSRW
Trigger: CCACCTACTCAGTCTTCCGCACGGTCCACACGCAGG...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGACCTGCGTGTGGACCGTaGGGAAGACTGAGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGPACGP*GRLSRW
Trigger: CCACCTACTCAGTCTTCCGCACGGTCCACACGCAGG...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp CTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGGAGAAGTTGTGTGCTaGCCACAGCACTGCGGATCT +
Preference number: 4 (lower is better)
Translates to: LDAGCTVRVENRGPGPGWGEVVC*PQHCGS
Trigger: AGATCCGCAGTGCTGTGGGCAGCACACAACTTCTCC...CCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGAATGGCAGAGATGGTaGCCATGGGGAGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGEWQRW*PWGGGG
Trigger: CCCACCTCCTCCCCATGGGCACCATCTCTGCCATTC...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGTCAGCAAAGCGGGCTaGGCGGGGATGGCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: RPAFTVTSTLGVQYGWRTVSKAG*AGMAAS
Trigger: CGAGGCAGCCATCCCCGCCCAGCCCGCTTTGCTGAC...GGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGGGCCAGGGTACATCCTaGGGAAGGTGCTGCTACCCC +
Preference number: 4 (lower is better)
Translates to: TGRPAFTVTSTLGVQYGWGQGTS*GRCCYP
Trigger: GGGGTAGCAGCACCTTCCCCAGGATGTACCCTGGCC...CCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGGGCACCCTTGCCCTGTaGGTGGCCCACACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: TGRPAFTVTSTLGVQYGWGTLAL*VAHTVF
Trigger: GAAGACTGTGTGGGCCACCCACAGGGCAAGGGTGCC...CCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCCCTGCTGGCCCTCGCTaGTATGGTAGTGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGPAGPR*YGSVWK
Trigger: CTTCCACACACTACCATACCAGCGAGGGCCAGCAGG...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCGGCGCCTCCAGAGAGTaGGACTTGGCAAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGGASRE*DLAKSF
Trigger: GAAGCTCTTTGCCAAGTCCCACTCTCTGGAGGCGCC...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGTATCCATCCCGGCCCTaGCTGACCATCATGGTATGC +
Preference number: 4 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGYPSRP*LTIMVC
Trigger: GCATACCATGATGGTCAGCCAGGGCCGGGATGGATA...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGCTTTGGGAGATGTCTTaGGGCTGCCGTCTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGLWEMS*GCRLSL
Trigger: GAGACTCAGACGGCAGCCCCAAGACATCTCCCAAAG...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGTCGGGCGACTGCTTTaGGAGATGTCTTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMVGRLL*EMSWGC
Trigger: GCAGCCCCAAGACATCTCCCAAAGCAGTCGCCCGAC...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGGGTGGATCCGGGGTaGGACACAGCAGTTGATCCT +
Preference number: 4 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWGVDPG*DTAVDP
Trigger: AGGATCAACTGCTGTGTCCCACCCCGGATCCACCCC...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGAGTCGGTGCTGCTCTaGGCGGTGATGGAGATGCGG +
Preference number: 4 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGESVLL*AVMEMR
Trigger: CCGCATCTCCATCACCGCCCAGAGCAGCACCGACTC...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGAAACCCGCCAGGTCCTaGAAGGTGGGCACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWKPARS*KVGTGN
Trigger: GTTCCCTGTGCCCACCTTCCAGGACCTGGCGGGTTT...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCGGGTCACATCCTCGATaGAGAGCTGTAGGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGGSHPR*RAVGGP
Trigger: GGGACCTCCTACAGCTCTCCATCGAGGATGTGACCC...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGCCCATGGGGAGGAGGTaGGGACAAAGCGTCGGACCA +
Preference number: 4 (lower is better)
Translates to: PGLARGGKNGRDGAHGEEPMGRR*GQSVGP
Trigger: TGGTCCGACGCTTTGTCCCCACCTCCTCCCCATGGG...CTCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCAGCCACTGTGGTCCCTaGGCCCAGTGGGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: RPAFTVTSTLGVQYGWRTSHCGP*AQWAEG
Trigger: GCCCTCTGCCCACTGGGCCCAGGGACCACAGTGGCT...GGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCCGACTGTCCATCCAGTaGCATGGACATGCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGRLSIQ*HGHASA
Trigger: TGCACTGGCATGTCCATGTCACTGGATGGACAGTCG...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGACTCGGTGTCCGAATCTaGGATCGTCTCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRLGVRI*DRLHLH
Trigger: GTGCAGGTGGAGACGATCTCAGATTCGGACACCGAG...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp CTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGCACTATTGGAGCGCTTaGACCTTGCTCGCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: LDAGCTVRVENRGPGPGWHYWSA*TLLASC
Trigger: ACAAGAGGCGAGCAAGGTTCAAGCGCTCCAATAGTG...CCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCGGATCCATGCTTTGCTaGCACAGCCGGAAGAACTGC +
Preference number: 4 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGGSMLC*HSRKNC
Trigger: GCAGTTCTTCCGGCTGTGTCAGCAAAGCATGGATCC...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGAAAAGCCACGAAGCTTaGTCCCCACGAAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWKSHEA*SPRSPA
Trigger: GGCTGGGCTTCGTGGGGATCAAGCTTCGTGGCTTTT...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp CCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGTGCTCTTGCTCCTCTTaGCGTGCCGGGACTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PGLARGGKNGRDGAHGEECSCSS*RAGTGG
Trigger: ACCACCAGTCCCGGCACGGCAAGAGGAGCAAGAGCA...CTCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGCCAGTGACATGGACATaGCAGTGCAGGCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPPVTWT*QCRQGS
Trigger: GCTGCCTTGCCTGCACTGGCATGTCCATGTCACTGG...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACTGACCATCATGGTATaGCAGGCACTTCGCTTGACC +
Preference number: 4 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVLTIMV*QALRLT
Trigger: GGTCAAGCGAAGTGCCTGGCATACCATGATGGTCAG...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGCACACGGCCTCCAGCTaGTGGTTCAACTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPHTASS*WFNSSL
Trigger: CAGCGATGAGTTGAACCAGCAGCTGGAGGCCGTGTG...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGACACACGGCCTCCAGCTaGTGGTTCAACTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRHTASS*WFNSSL
Trigger: CAGCGATGAGTTGAACCAGCAGCTGGAGGCCGTGTG...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAAGCTCCAGGTCTGCCTaGACGCCAGCCGTCACACTA +
Preference number: 4 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGSSRSA*TPAVTL
Trigger: TAGTGTGACGGCTGGCGTGCAGGCAGACCTGGAGCT...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCACGTCCATATGCTGTTaGTCAGCAAAGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGTSICC*SAKRAG
Trigger: CCCAGCCCGCTTTGCTGACCAACAGCATATGGACGT...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGACCCTTGCCCTGTGGGTaGCCCACACAGTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGPLPCG*PTQSSQ
Trigger: CTGTGAAGACTGTGTGGGCCACCCACAGGGCAAGGG...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTAGTCCATCCAGTGACATaGACATGCCAGTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVVHPVT*TCQCRQ
Trigger: TTGCCTGCACTGGCATGTCCATGTCACTGGATGGAC...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCTATCCATCCCGGCCCTaGCTGACCATCATGGTATGC +
Preference number: 4 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGYPSRP*LTIMVC
Trigger: GCATACCATGATGGTCAGCCAGGGCCGGGATGGATA...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGGTCGGGCGACTGCTTTaGGAGATGTCTTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TGRPAFTVTSTLGVQYGWVGRLL*EMSWGC
Trigger: GCAGCCCCAAGACATCTCCCAAAGCAGTCGCCCGAC...CCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGCAGTTGATCCTGGCCTaGTCCACGCTGGAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: PGLARGGKNGRDGAHGEEQLILA*STLEER
Trigger: TCGCTCCTCCAGCGTGGACCAGGCCAGGATCAACTG...CTCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGGGGTGGATCCGGGGTaGGACACAGCAGTTGATCCT +
Preference number: 4 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGGVDPG*DTAVDP
Trigger: AGGATCAACTGCTGTGTCCCACCCCGGATCCACCCC...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCATGGAGCTCCGGGGGTaGATCCGGGGTGGGACACAG +
Preference number: 4 (lower is better)
Translates to: RPAFTVTSTLGVQYGWRTMELRG*IRGGTQ
Trigger: CTGTGTCCCACCCCGGATCCACCCCCGGAGCTCCAT...GGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGGCTGTAGCCAGGGATaGAGCTCCGGGGGTGGATCC +
Preference number: 4 (lower is better)
Translates to: RPAFTVTSTLGVQYGWRTGCSQG*SSGGGS
Trigger: GGATCCACCCCCGGAGCTCCATCCCTGGCTACAGCC...GGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGACGGCCTCCAGCTGCTaGTTCAACTCATCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWTASSC*FNSSLS
Trigger: GCTCAGCGATGAGTTGAACCAGCAGCTGGAGGCCGT...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGACGGCCTCCAGCTGCTaGTTCAACTCATCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPTASSC*FNSSLS
Trigger: GCTCAGCGATGAGTTGAACCAGCAGCTGGAGGCCGT...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGCAGAGATGGTGCCCATaGGGAGGAGGTGGGGACAAA +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPQRWCP*GGGGDK
Trigger: TTTGTCCCCACCTCCTCCCCATGGGCACCATCTCTG...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGCATGGTAACCCCTCATaGCCTCAGCAAAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LDAGCTVRVENRGPGPGWHGNPS*PQQRLF
Trigger: GAAGAGCCTTTGCTGAGGCCATGAGGGGTTACCATG...CCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373347.6
CDS-3UTR TCA 90 bp CGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCCATCCCGGCCCTGGCTaGCCATCATGGTATGCCAGG +
Preference number: 4 (lower is better)
Translates to: RPAFTVTSTLGVQYGWRTHPGPG*PSWYAR
Trigger: CCTGGCATACCATGATGGTCAGCCAGGGCCGGGATG...GGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp ACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGCTCGGTGTCCGAATCTaGGATCGTCTCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: TGRPAFTVTSTLGVQYGWLGVRI*DRLHLH
Trigger: GTGCAGGTGGAGACGATCTCAGATTCGGACACCGAG...CCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGATCCATGCTTTGCTaGCACAGCCGGAAGAACTGC +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGGSMLC*HSRKNC
Trigger: GCAGTTCTTCCGGCTGTGTCAGCAAAGCATGGATCC...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGTAGCTCCAGGAACTTaGGGGTCACATCCTCGATGG +
Preference number: 4 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWVAPGT*GSHPRW
Trigger: CCATCGAGGATGTGACCCTCAAGTTCCTGGAGCTAC...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGATCCAGCTGTTGGCCTTaGGTTGCTGTAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGSSCWP*VAVAPG
Trigger: TCCTGGAGCTACAGCAACTCAAGGCCAACAGCTGGA...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp ACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGGGGCCCACGTCCATATaGTGTTGGTCAGCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: TGRPAFTVTSTLGVQYGWGPTSI*CWSAKR
Trigger: CCGCTTTGCTGACCAACAGCATATGGACGTGGGCCC...CCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp CCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGGAAGCGTCGGGCGACTaGTTTGGGAGATGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: PGLARGGKNGRDGAHGEEEASGD*FGRCLG
Trigger: CCCAAGACATCTCCCAAAGCAGTCGCCCGACGCTTC...CTCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGTTGTCCTCTTCCACCTaGACGCCAATAGAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGLSSST*TPIEWN
Trigger: GTTCCACTCTATTGGCGTGCAGGTGGAAGAGGACAA...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTATTGTCCTCTTCCACCTaGACGCCAATAGAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVLSSST*TPIEWN
Trigger: GTTCCACTCTATTGGCGTGCAGGTGGAAGAGGACAA...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGAATCTGCTGGCACCAGTaGTCCAGCTTCTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRICWHQ*SSFSTS
Trigger: AGAGGTGGAGAAGCTGGAGCACTGGTGCCAGCAGAT...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGATCTGCTGGCACCAGTaGTCCAGCTTCTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPICWHQ*SSFSTS
Trigger: AGAGGTGGAGAAGCTGGAGCACTGGTGCCAGCAGAT...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGAGAAGTTGTGTGCTaGCCACAGCACTGCGGATCT +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPGEVVC*PQHCGS
Trigger: AGATCCGCAGTGCTGTGGGCAGCACACAACTTCTCC...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGACAGGAGAAGTTGTGTaGTGCCCACAGCACTGCGGA +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMTGEVV*CPQHCG
Trigger: TCCGCAGTGCTGTGGGCAGCACACAACTTCTCCTGT...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGAACAGGAGAAGTTGTGTaGTGCCCACAGCACTGCGGA +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRTGEVV*CPQHCG
Trigger: TCCGCAGTGCTGTGGGCAGCACACAACTTCTCCTGT...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGAACGCAGTGGGATCCATaGTTTGCTGACACAGCCGGA +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRTQWDP*FADTAG
Trigger: TCCGGCTGTGTCAGCAAAGCATGGATCCCACTGCGT...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGCTCTTCCCTCAGCCTTaGGCCCATTATAGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMLFPQP*AHYSPA
Trigger: AGCGGGACTATAATGGGCCCAAGGCTGAGGGAAGAG...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCCCGGTAGGACCCATCTaGACCCTCCAGGCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RPAFTVTSTLGVQYGWRTPVGPI*TLQAEG
Trigger: CCCTTCTGCCTGGAGGGTCCAGATGGGTCCTACCGG...GGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGCTTTGGGAGATGTCTTaGGGCTGCCGTCTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPLWEMS*GCRLSL
Trigger: GAGACTCAGACGGCAGCCCCAAGACATCTCCCAAAG...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGTCAGAGGCGTGCCTCTaGAAGGAGCGTCCAAACTGC +
Preference number: 4 (lower is better)
Translates to: TGRPAFTVTSTLGVQYGWSEACL*KERPNC
Trigger: GCAGTTTGGACGCTCCTTCCAGAGGCACGCCTCTGA...CCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCACAGGGAACGCAGTaGGATCCATGCTTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMAQGTQ*DPCFAD
Trigger: GTCAGCAAAGCATGGATCCCACTGCGTTCCCTGTGC...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGACAGAGATGGTGCCCATaGGGAGGAGGTGGGGACAAA +
Preference number: 4 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGQRWCP*GGGGDK
Trigger: TTTGTCCCCACCTCCTCCCCATGGGCACCATCTCTG...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp CTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGAACTGCTTTTCAAACTaGTCCAGGAGTGTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LDAGCTVRVENRGPGPGWNCFSN*SRSVGG
Trigger: GCCTCCTACACTCCTGGATCAGTTTGAAAAGCAGTT...CCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGACGACTGTCCATCCAGTaGCATGGACATGCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGRLSIQ*HGHASA
Trigger: TGCACTGGCATGTCCATGTCACTGGATGGACAGTCG...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGACACTATTGGAGCGCTTaGACCTTGCTCGCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRHYWSA*TLLASC
Trigger: ACAAGAGGCGAGCAAGGTTCAAGCGCTCCAATAGTG...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp CCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGAGCCGGAAGAACTGCTaGACCTTCTGGGACAGGAGA +
Preference number: 4 (lower is better)
Translates to: PGLARGGKNGRDGAHGEESRKNC*TFWDRR
Trigger: TCTCCTGTCCCAGAAGGTTCAGCAGTTCTTCCGGCT...CTCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGATCCAGCTGTTGGCCTTaGGTTGCTGTAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGSSCWP*VAVAPG
Trigger: TCCTGGAGCTACAGCAACTCAAGGCCAACAGCTGGA...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGACTGACCATCATGGTATaGCAGGCACTTCGCTTGACC +
Preference number: 4 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGLTIMV*QALRLT
Trigger: GGTCAAGCGAAGTGCCTGGCATACCATGATGGTCAG...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGGAGCGCTTGAACCTTaGTCGCCTCTTGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGGALEP*SPLVLF
Trigger: GAAGAGGACAAGAGGCGAGCAAGGTTCAAGCGCTCC...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGAAGGAGCGTCCAAACTaGAGGGCCTTGTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWKERPN*RALSSV
Trigger: CACAGAAGACAAGGCCCTGCAGTTTGGACGCTCCTT...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGAAGGAGCGTCCAAACTaGAGGGCCTTGTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMKERPN*RALSSV
Trigger: CACAGAAGACAAGGCCCTGCAGTTTGGACGCTCCTT...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp CCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGTGCTGCCCACAGCACTaGGGATCTTCTCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: PGLARGGKNGRDGAHGEECCPQH*GSSPGS
Trigger: AGATCCTGGAGAAGATCCGCAGTGCTGTGGGCAGCA...CTCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGATGCTGCCCACAGCACTaGGGATCTTCTCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGCCPQH*GSSPGS
Trigger: AGATCCTGGAGAAGATCCGCAGTGCTGTGGGCAGCA...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp ACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGACGCAGTGGGATCCATaGTTTGCTGACACAGCCGGA +
Preference number: 4 (lower is better)
Translates to: TGRPAFTVTSTLGVQYGWTQWDP*FADTAG
Trigger: TCCGGCTGTGTCAGCAAAGCATGGATCCCACTGCGT...CCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCCTGTTGGCCTTGAGTTaGTGTAGCTCCAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGLLALS*CSSRNL
Trigger: CAAGTTCCTGGAGCTACAGCAACTCAAGGCCAACAG...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCCCCTTGCCCTGTGGGTaGCCCACACAGTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: RPAFTVTSTLGVQYGWRTPLPCG*PTQSSQ
Trigger: CTGTGAAGACTGTGTGGGCCACCCACAGGGCAAGGG...GGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGTGGAAGCCATCTTGTTaGACTGGCAACTGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGWKPSC*TGNCFS
Trigger: TGAAAAGCAGTTGCCAGTTCAACAAGATGGCTTCCA...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp CGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCCCAGTGACATGGACATaGCAGTGCAGGCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RPAFTVTSTLGVQYGWRTPVTWT*QCRQGS
Trigger: GCTGCCTTGCCTGCACTGGCATGTCCATGTCACTGG...GGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGGTCCATCCAGTGACATaGACATGCCAGTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: PGLARGGKNGRDGAHGEEVHPVT*TCQCRQ
Trigger: TTGCCTGCACTGGCATGTCCATGTCACTGGATGGAC...CTCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGATATTCAAGGGGATGTaGGAACAGCCACAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPIFKGM*EQPQVW
Trigger: CCACACCTGTGGCTGTTCCCACATCCCCTTGAATAT...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR GCA 90 bp ACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGCTGTTGGCCTTGAGTTaGTGTAGCTCCAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: TGRPAFTVTSTLGVQYGWLLALS*CSSRNL
Trigger: CAAGTTCCTGGAGCTACAGCAACTCAAGGCCAACAG...CCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGGATAGTGATAAGTCCTaGCTTTGGCCTTGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: PGLARGGKNGRDGAHGEEDSDKS*LWPWSP
Trigger: CGGAGACCAAGGCCAAAGCCAGGACTTATCACTATC...CTCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAATATTCAAGGGGATGTaGGAACAGCCACAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGIFKGM*EQPQVW
Trigger: CCACACCTGTGGCTGTTCCCACATCCCCTTGAATAT...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGTGGAAGCCATCTTGTTaGACTGGCAACTGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPWKPSC*TGNCFS
Trigger: TGAAAAGCAGTTGCCAGTTCAACAAGATGGCTTCCA...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CCA 90 bp CGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGATAGTGATAAGTCCTaGCTTTGGCCTTGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: RPAFTVTSTLGVQYGWRTDSDKS*LWPWSP
Trigger: CGGAGACCAAGGCCAAAGCCAGGACTTATCACTATC...GGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR TCA 90 bp CGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCAACTGCTTTTCAAACTaGTCCAGGAGTGTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RPAFTVTSTLGVQYGWRTNCFSN*SRSVGG
Trigger: GCCTCCTACACTCCTGGATCAGTTTGAAAAGCAGTT...GGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CCA 90 bp CCCTCGGCCGCCGTGAAGCTCTCGTGCGCGGAGTCGGTGCTGCTCTaGGCGGTGATGGAGATGCGGGGCGGGGCCTGGCTTCCCGGCGGG +
Preference number: 5 (lower is better)
Translates to: PSAAVKLSCAESVLL*AVMEMRGGAWLPGG
Trigger: CCCGCCGGGAAGCCAGGCCCCGCCCCGCATCTCCATCACCGCCCAGAGCAGCACCGACTCCGCGCACGAGAGCTTCACGGCGGCCGAGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CCA 90 bp GGCAGGGCCGGGCGACCCATCGGTGGCCGGCGGCTCGTACGGCAGTaGGTAGCCCTCGCGGTAGGCCCACTGGCCCTGCGTGTGGACCGT +
Preference number: 5 (lower is better)
Translates to: GRAGRPIGGRRLVRQ*VALAVGPLALRVDR
Trigger: ACGGTCCACACGCAGGGCCAGTGGGCCTACCGCGAGGGCTACCCACTGCCGTACGAGCCGCCGGCCACCGATGGGTCGCCCGGCCCTGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACGCCCTGGTCCTGGGTaGGTCCAGCCACTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVRPGPG*VQPLWS
Trigger: GGACCACAGTGGCTGGACCAACCCAGGACCAGGGCG...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCCGCCCTGGTCCTGGGTaGGTCCAGCCACTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGRPGPG*VQPLWS
Trigger: GGACCACAGTGGCTGGACCAACCCAGGACCAGGGCG...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTAGGGGCCTTTCTGAAGTaGAAGGAGGAGCCGGGCCTC +
Preference number: 5 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVGAFLK*KEEPGL
Trigger: GAGGCCCGGCTCCTCCTTCAACTTCAGAAAGGCCCC...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCCCCGCAGGGGCTTCTTaGGTATCGGCGGAGGGACCT +
Preference number: 5 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGPAGAS*VSAEGP
Trigger: AGGTCCCTCCGCCGATACCAAAGAAGCCCCTGCGGG...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS GCA 90 bp GAGCCCAGCAGGTATGGGGCCCTGGCAGCAGGGCCCACGTCCATATaGTGTTGGTCAGCAAAGCGGGCTGGGCGGGGATGGCTGCCTCGG +
Preference number: 5 (lower is better)
Translates to: EPSRYGALAAGPTSI*CWSAKRAGRGWLPR
Trigger: CCGAGGCAGCCATCCCCGCCCAGCCCGCTTTGCTGACCAACAGCATATGGACGTGGGCCCTGCTGCCAGGGCCCCATACCTGCTGGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235180.4
ENST00000373347.6
ENST00000495979.1
CDS GCA 90 bp GAGATCGTCTCCACCTGCACCCCAATGGACGGCCGCCACTTCCGCTaGCGCGCCAGGCTCCGCAGCTCCTCCCTGCCAGGGATGGTCTTG +
Preference number: 5 (lower is better)
Translates to: EIVSTCTPMDGRHFR*RARLRSSSLPGMVL
Trigger: CAAGACCATCCCTGGCAGGGAGGAGCTGCGGAGCCTGGCGCGGCAGCGGAAGTGGCGGCCGTCCATTGGGGTGCAGGTGGAGACGATCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CCA 90 bp AGTCCTGGCTTTGGCCTTGGTCTCCGGACCCAGGAGCCCCTTGCCTaGCCCGGCCCCCGGGTATCCATCCCGGCCCTGGCTGACCATCAT +
Preference number: 5 (lower is better)
Translates to: SPGFGLGLRTQEPLA*PGPRVSIPALADHH
Trigger: ATGATGGTCAGCCAGGGCCGGGATGGATACCCGGGGGCCGGGCCAGGCAAGGGGCTCCTGGGTCCGGAGACCAAGGCCAAAGCCAGGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGTGCCGCCCATCCCCCTaGCGGTCCTTGCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWCRPSP*RSLLLL
Trigger: GAGCAAGAGCAAGGACCGCAAGGGGGATGGGCGGCA...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGTCCTGGCTTTGGCCTaGGTCTCCGGACCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGVLALA*VSGPRS
Trigger: GCTCCTGGGTCCGGAGACCAAGGCCAAAGCCAGGAC...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTATCTGCCCGCAGCATCTaGATGAACCACTCGCCGTCG +
Preference number: 5 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVSARSI*MNHSPS
Trigger: CGACGGCGAGTGGTTCATCAAGATGCTGCGGGCAGA...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS TCA 90 bp CAGTGCAGGCAAGGCAGCGGCCTTCCGACCCGCCCGAGCGCCCCTTaGAGCTCAAGTCCCGGTAGGACCCATCTGGACCCTCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: QCRQGSGLPTRPSAP*SSSPGRTHLDPPGR
Trigger: TCTGCCTGGAGGGTCCAGATGGGTCCTACCGGGACTTGAGCTTCAAGGGGCGCTCGGGCGGGTCGGAAGGCCGCTGCCTTGCCTGCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CCA 90 bp AGCAGGTATGGGGCCCTGGCAGCAGGGCCCACGTCCATATGCTGTTaGTCAGCAAAGCGGGCTGGGCGGGGATGGCTGCCTCGGTCGCCA +
Preference number: 5 (lower is better)
Translates to: SRYGALAAGPTSICC*SAKRAGRGWLPRSP
Trigger: TGGCGACCGAGGCAGCCATCCCCGCCCAGCCCGCTTTGCTGACCAACAGCATATGGACGTGGGCCCTGCTGCCAGGGCCCCATACCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235180.4
ENST00000373347.6
ENST00000495979.1
CDS-3UTR CAA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGTCCTGGCTTTGGCCTaGGTCTCCGGACCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGVLALA*VSGPRS
Trigger: GCTCCTGGGTCCGGAGACCAAGGCCAAAGCCAGGAC...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp CTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGCTTTGGGAGATGTCTaGGGGCTGCCGTCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: LDAGCTVRVENRGPGPGWALGDV*GLPSES
Trigger: AGACTCAGACGGCAGCCCCAAGACATCTCCCAAAGC...CCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGCGTCGGGCGACTGCTTaGGGAGATGTCTTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWRRATA*GDVLGL
Trigger: CAGCCCCAAGACATCTCCCAAAGCAGTCGCCCGACG...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGGTGGGACACAGCAGTaGATCCTGGCCTGGTCCACG +
Preference number: 5 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMGGTQQ*ILAWST
Trigger: CGTGGACCAGGCCAGGATCAACTGCTGTGTCCCACC...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGCAGGCAGTCGTCGTCTaGAGAGCAGCCGGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMQAVVV*RAAGLD
Trigger: ATCCAGGCCGGCTGCTCTCAAGACGACGACTGCCTG...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGACAGGCAGTCGTCGTCTaGAGAGCAGCCGGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRQAVVV*RAAGLD
Trigger: ATCCAGGCCGGCTGCTCTCAAGACGACGACTGCCTG...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCCCAAACTGCAGGGCCTaGTCTTCTGTGGCCACCGTG +
Preference number: 5 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGPNCRA*SSVATV
Trigger: CACGGTGGCCACAGAAGACAAGGCCCTGCAGTTTGG...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCTCTGCCCGCAGCATCTaGATGAACCACTCGCCGTCG +
Preference number: 5 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGSARSI*MNHSPS
Trigger: CGACGGCGAGTGGTTCATCAAGATGCTGCGGGCAGA...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGACCCGCAGGGGCTTCTTaGGTATCGGCGGAGGGACCT +
Preference number: 5 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGPAGAS*VSAEGP
Trigger: AGGTCCCTCCGCCGATACCAAAGAAGCCCCTGCGGG...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CCA 90 bp GGCCGGGGTAGCTGTCTCCTCCAGAGCCACCTCTTCCCTCAGCCTTaGGCCCATTATAGTCCCGCTTCCCCGGCGCCTCCAGAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: GRGSCLLQSHLFPQP*AHYSPASPAPPESG
Trigger: CCCACTCTCTGGAGGCGCCGGGGAAGCGGGACTATAATGGGCCCAAGGCTGAGGGAAGAGGTGGCTCTGGAGGAGACAGCTACCCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CCA 90 bp AGGAGCCCCTTGCCTGGCCCGGCCCCCGGGTATCCATCCCGGCCCTaGCTGACCATCATGGTATGCCAGGCACTTCGCTTGACCGACTGT +
Preference number: 5 (lower is better)
Translates to: RSPLPGPAPGYPSRP*LTIMVCQALRLTDC
Trigger: ACAGTCGGTCAAGCGAAGTGCCTGGCATACCATGATGGTCAGCCAGGGCCGGGATGGATACCCGGGGGCCGGGCCAGGCAAGGGGCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CCA 90 bp GGCAGCAGGGCCCACGTCCATATGCTGTTGGTCAGCAAAGCGGGCTaGGCGGGGATGGCTGCCTCGGTCGCCATGGTAACCCCTCATGGC +
Preference number: 5 (lower is better)
Translates to: GSRAHVHMLLVSKAG*AGMAASVAMVTPHG
Trigger: GCCATGAGGGGTTACCATGGCGACCGAGGCAGCCATCCCCGCCCAGCCCGCTTTGCTGACCAACAGCATATGGACGTGGGCCCTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373347.6
ENST00000495979.1
CDS-3UTR CAA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGACGTCGGGCGACTGCTTaGGGAGATGTCTTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGRRATA*GDVLGL
Trigger: CAGCCCCAAGACATCTCCCAAAGCAGTCGCCCGACG...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGGTGGGACACAGCAGTaGATCCTGGCCTGGTCCACG +
Preference number: 5 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGGGTQQ*ILAWST
Trigger: CGTGGACCAGGCCAGGATCAACTGCTGTGTCCCACC...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGGGGCCTTTCTGAAGTaGAAGGAGGAGCCGGGCCTC +
Preference number: 5 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGGAFLK*KEEPGL
Trigger: GAGGCCCGGCTCCTCCTTCAACTTCAGAAAGGCCCC...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp GAGAGGCCCAGGCGCCCTGGTCCTGGGTTGGTCCAGCCACTGTGGTCCCTGGGCAACCTTGCTCGCCTCTaGTCCTCTTCCACCTGCACG +
Preference number: 5 (lower is better)
Translates to: ERPRRPGPGLVQPLWSLGNLARL*SSSTCT
Trigger: CGTGCAGGTGGAAGAGGACAAGAGGCGAGCAAGGTT...GCCCAGGGACCACAGTGGCTGGACCAACCCAGGACCAGGGCGCCTGGGCCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGACCAAACTGCAGGGCCTaGTCTTCTGTGGCCACCGTG +
Preference number: 5 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGPNCRA*SSVATV
Trigger: CACGGTGGCCACAGAAGACAAGGCCCTGCAGTTTGG...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp CTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGTTCCAGCTGTTGGCCTaGAGTTGCTGTAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LDAGCTVRVENRGPGPGWFQLLA*SCCSSR
Trigger: CCTGGAGCTACAGCAACTCAAGGCCAACAGCTGGAA...CCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CCA 90 bp CATCTTGCGGCACCTGCAGATAGTGATAAGTCCTGGCTTTGGCCTTaGTCTCCGGACCCAGGAGCCCCTTGCCTGGCCCGGCCCCCGGGT +
Preference number: 5 (lower is better)
Translates to: HLAAPADSDKSWLWP*SPDPGAPCLARPPG
Trigger: ACCCGGGGGCCGGGCCAGGCAAGGGGCTCCTGGGTCCGGAGACCAAGGCCAAAGCCAGGACTTATCACTATCTGCAGGTGCCGCAAGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGCACGTCCATATGCTGTaGGTCAGCAAAGCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPHVHML*VSKAGW
Trigger: CCAGCCCGCTTTGCTGACCAACAGCATATGGACGTG...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGCACGTCCATATGCTGTaGGTCAGCAAAGCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMHVHML*VSKAGW
Trigger: CCAGCCCGCTTTGCTGACCAACAGCATATGGACGTG...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGTGCCAGGCACTTCGCTaGACCGACTGTCCATCCAGT +
Preference number: 5 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWCQALR*TDCPSS
Trigger: ACTGGATGGACAGTCGGTCAAGCGAAGTGCCTGGCA...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGTGCCAGGCACTTCGCTaGACCGACTGTCCATCCAGT +
Preference number: 5 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPCQALR*TDCPSS
Trigger: ACTGGATGGACAGTCGGTCAAGCGAAGTGCCTGGCA...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGCTTTGGGAGATGTCTaGGGGCTGCCGTCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWALGDV*GLPSES
Trigger: AGACTCAGACGGCAGCCCCAAGACATCTCCCAAAGC...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGACACTATTGGAGCGCTaGAACCTTGCTCGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGTLLER*NLARLL
Trigger: CAAGAGGCGAGCAAGGTTCAAGCGCTCCAATAGTGT...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp TGGGGCGGGCGCACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTAAGTGGGATCCATGCTTaGCTGACACAGCCGGAAGAA +
Preference number: 5 (lower is better)
Translates to: WGGRTGRPAFTVTSTLGVSGIHA*LTQPEE
Trigger: TTCTTCCGGCTGTGTCAGCAAAGCATGGATCCCACT...TACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGTGCGCCCGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGTGTAGCTCCAGGAACTaGAGGGTCACATCCTCGATG +
Preference number: 5 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGCSSRN*RVTSSM
Trigger: CATCGAGGATGTGACCCTCAAGTTCCTGGAGCTACA...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGCAGGGTGTCCCATCCTaGATGTCAGGATCCCCACCA +
Preference number: 5 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWQGVPS*MSGSPP
Trigger: TGGTGGGGATCCTGACATCAAGGATGGGACACCCTG...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373347.6
CDS-3UTR CAA 90 bp CCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGAGGCTCTTCATAGTCTaGGGGGCCAGGCCCCAGGAA +
Preference number: 5 (lower is better)
Translates to: PGLARGGKNGRDGAHGEERLFIV*GARPQE
Trigger: TTCCTGGGGCCTGGCCCCCAAGACTATGAAGAGCCT...CTCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373347.6
CDS GCA 90 bp CTCACGCTCCATCTGCTGGCACCAGTGCTCCAGCTTCTCCACCTCTaGCCGCAGCATCTTGATGAACCACTCGCCGTCGCGTGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LTLHLLAPVLQLLHL*PQHLDEPLAVAWAG
Trigger: CCCTGCCCACGCGACGGCGAGTGGTTCATCAAGATGCTGCGGGCAGAGGTGGAGAAGCTGGAGCACTGGTGCCAGCAGATGGAGCGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp TCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGCTATCACTGTCCAAGTaGTCATCGGAACTCCACCAG +
Preference number: 5 (lower is better)
Translates to: STLGVQYGWRTAGPGRAGLSLSK*SSELHQ
Trigger: CTGGTGGAGTTCCGATGACAACTTGGACAGTGATAG...CCCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp ACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAACCTTGCTCGCCTCTaGTCCTCTTCCACCTGCACG +
Preference number: 5 (lower is better)
Translates to: TGRPAFTVTSTLGVQYGWNLARL*SSSTCT
Trigger: CGTGCAGGTGGAAGAGGACAAGAGGCGAGCAAGGTT...CCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGCCAGCCGTCACACTATaGGAGCGCTTGAACCTTGCT +
Preference number: 5 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMPAVTL*ERLNLA
Trigger: AGCAAGGTTCAAGCGCTCCAATAGTGTGACGGCTGG...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp GACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGCCAGCCGTCACACTATaGGAGCGCTTGAACCTTGCT +
Preference number: 5 (lower is better)
Translates to: DPARPGPWGKEWQRWCPWPAVTL*ERLNLA
Trigger: AGCAAGGTTCAAGCGCTCCAATAGTGTGACGGCTGG...CCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGAAAAAGCCACGAAGCTaGATCCCCACGAAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMKKPRS*IPTKPS
Trigger: GCTGGGCTTCGTGGGGATCAAGCTTCGTGGCTTTTT...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp CCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAAAAAAGCCACGAAGCTaGATCCCCACGAAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: PARPGPWGKEWQRWCPWGKKPRS*IPTKPS
Trigger: GCTGGGCTTCGTGGGGATCAAGCTTCGTGGCTTTTT...TCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS GCA 90 bp CCGGCCCCCGGGTATCCATCCCGGCCCTGGCTGACCATCATGGTATaGCAGGCACTTCGCTTGACCGACTGTCCATCCAGTGACATGGAC +
Preference number: 5 (lower is better)
Translates to: PAPGYPSRPWLTIMV*QALRLTDCPSSDMD
Trigger: GTCCATGTCACTGGATGGACAGTCGGTCAAGCGAAGTGCCTGGCATACCATGATGGTCAGCCAGGGCCGGGATGGATACCCGGGGGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS GCA 90 bp CGTCCATATGCTGTTGGTCAGCAAAGCGGGCTGGGCGGGGATGGCTaGCTCGGTCGCCATGGTAACCCCTCATGGCCTCAGCAAAGGCTC +
Preference number: 5 (lower is better)
Translates to: RPYAVGQQSGLGGDG*LGRHGNPSWPQQRL
Trigger: GAGCCTTTGCTGAGGCCATGAGGGGTTACCATGGCGACCGAGGCAGCCATCCCCGCCCAGCCCGCTTTGCTGACCAACAGCATATGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373347.6
ENST00000495979.1
CDS-3UTR CAA 90 bp CTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGGGCTGGGTGGAAGCCATCTTGTaGAACTGGCAACTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: LDAGCTVRVENRGPGPGWVEAIL*NWQLLF
Trigger: GAAAAGCAGTTGCCAGTTCAACAAGATGGCTTCCAC...CCAGCCCGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp GCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGAACACTATTGGAGCGCTaGAACCTTGCTCGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: AQMRDPARPGPWGKEWQRTLLER*NLARLL
Trigger: CAAGAGGCGAGCAAGGTTCAAGCGCTCCAATAGTGT...TCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp AGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCGCGGGCCCGGGCCGAGTGGGATCCATGCTTaGCTGACACAGCCGGAAGAA +
Preference number: 5 (lower is better)
Translates to: SDLDAGCTVRVENRGPGPSGIHA*LTQPEE
Trigger: TTCTTCCGGCTGTGTCAGCAAAGCATGGATCCCACT...CGGCCCGGGCCCGCGGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp CCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGAGTTCCAGCTGTTGGCCTaGAGTTGCTGTAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PGLARGGKNGRDGAHGEEFQLLA*SCCSSR
Trigger: CCTGGAGCTACAGCAACTCAAGGCCAACAGCTGGAA...CTCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp ACGGGGCGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGTGTAGCTCCAGGAACTaGAGGGTCACATCCTCGATG +
Preference number: 5 (lower is better)
Translates to: TGRPAFTVTSTLGVQYGWCSSRN*RVTSSM
Trigger: CATCGAGGATGTGACCCTCAAGTTCCTGGAGCTACA...CCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCGCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp ACGCAGAGCCCAGATGAGGGACCCGGCCCGGCCTGGCCCGTGGGGGAAAGAATGGTGGAAGCCATCTTGTaGAACTGGCAACTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: TQSPDEGPGPAWPVGERMVEAIL*NWQLLF
Trigger: GAAAAGCAGTTGCCAGTTCAACAAGATGGCTTCCAC...CATTCTTTCCCCCACGGGCCAGGCCGGGCCGGGTCCCTCATCTGGGCTCTGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGACTATCACTGTCCAAGTaGTCATCGGAACTCCACCAG +
Preference number: 5 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGLSLSK*SSELHQ
Trigger: CTGGTGGAGTTCCGATGACAACTTGGACAGTGATAG...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS TCA 90 bp CATCATGGTATGCCAGGCACTTCGCTTGACCGACTGTCCATCCAGTaGCATGGACATGCCAGTGCAGGCAAGGCAGCGGCCTTCCGACCC +
Preference number: 5 (lower is better)
Translates to: HHGMPGTSLDRLSIQ*HGHASAGKAAAFRP
Trigger: GGGTCGGAAGGCCGCTGCCTTGCCTGCACTGGCATGTCCATGTCACTGGATGGACAGTCGGTCAAGCGAAGTGCCTGGCATACCATGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp GCCCGGCCTGGCCCGTGGGGGAAAGAATGGCAGAGATGGTGCCCATGGGGAGGATGTGTGGAAGCCATCTaGTTGAACTGGCAACTGCTT +
Preference number: 5 (lower is better)
Translates to: ARPGPWGKEWQRWCPWGGCVEAI*LNWQLL
Trigger: AAGCAGTTGCCAGTTCAACAAGATGGCTTCCACACA...TCCTCCCCATGGGCACCATCTCTGCCATTCTTTCCCCCACGGGCCAGGCCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS-3UTR CAA 90 bp CGGCCCGCGTTCACAGTGACCTCGACGCTGGGTGTACAGTACGGGTGGAGAACCAGGAGTTTCCAGCTGTaGGCCTTGAGTTGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: RPAFTVTSTLGVQYGWRTRSFQL*ALSCCS
Trigger: GCTACAGCAACTCAAGGCCAACAGCTGGAAACTCCT...GGTTCTCCACCCGTACTGTACACCCAGCGTCGAGGTCACTGTGAACGCGGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CCA 90 bp AACCTTGCTCGCCTCTTGTCCTCTTCCACCTGCACGCCAATAGAGTaGAACTCCCTCCGGCTCCTGTTCTCGGTGTCCGAATCTGAGATC +
Preference number: 5 (lower is better)
Translates to: NLARLLSSSTCTPIE*NSLRLLFSVSESEI
Trigger: GATCTCAGATTCGGACACCGAGAACAGGAGCCGGAGGGAGTTCCACTCTATTGGCGTGCAGGTGGAAGAGGACAAGAGGCGAGCAAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CCA 72 bp GCGGCACCGGCGCCAACTCCAGTGTGCGCGCACCCATaGCGGGGCCGTCCAGCCCGTCGGCGGAGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: AAPAPTPVCAHP*RGRPARRRSCS
Trigger: GCTGCAGCTCCGCCGACGGGCTGGACGGCCCCGCCATGGGTGCGCGCACACTGGAGTTGGCGCCGGTGCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS GCA 72 bp CGCCGGGCGGGGCCCTCGGCCGCCGTGAAGCTCTCGTaGGCGGAGTCGGTGCTGCTCTGGGCGGTGATGGAG +
Preference number: 6 (lower is better)
Translates to: RRAGPSAAVKLS*AESVLLWAVME
Trigger: CTCCATCACCGCCCAGAGCAGCACCGACTCCGCGCACGAGAGCTTCACGGCGGCCGAGGGCCCCGCCCGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CCA 72 bp GGGCGACCCATCGGTGGCCGGCGGCTCGTACGGCAGTaGGTAGCCCTCGCGGTAGGCCCACTGGCCCTGCGT +
Preference number: 6 (lower is better)
Translates to: GRPIGGRRLVRQ*VALAVGPLALR
Trigger: ACGCAGGGCCAGTGGGCCTACCGCGAGGGCTACCCACTGCCGTACGAGCCGCCGGCCACCGATGGGTCGCCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS GCA 72 bp TCCACCTGCACCCCAATGGACGGCCGCCACTTCCGCTaGCGCGCCAGGCTCCGCAGCTCCTCCCTGCCAGGG +
Preference number: 6 (lower is better)
Translates to: STCTPMDGRHFR*RARLRSSSLPG
Trigger: CCCTGGCAGGGAGGAGCTGCGGAGCCTGGCGCGGCAGCGGAAGTGGCGGCCGTCCATTGGGGTGCAGGTGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS GCA 72 bp CCTCGCGGTAGGCCCACTGGCCCTGCGTGTGGACCGTaGGGAAGACTGAGTAGGTGGGGGCCCGGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: PRGRPTGPACGP*GRLSRWGPGAQ
Trigger: CTGGGCCCCGGGCCCCCACCTACTCAGTCTTCCGCACGGTCCACACGCAGGGCCAGTGGGCCTACCGCGAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS GCA 72 bp TGGCTTTGGCCTTGGTCTCCGGACCCAGGAGCCCCTTaGCTGGCCCGGCCCCCGGGTATCCATCCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: WLWPWSPDPGAP*LARPPGIHPGP
Trigger: AGGGCCGGGATGGATACCCGGGGGCCGGGCCAGGCAAGGGGCTCCTGGGTCCGGAGACCAAGGCCAAAGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CCA 72 bp GCCGTGAAGCTCTCGTGCGCGGAGTCGGTGCTGCTCTaGGCGGTGATGGAGATGCGGGGCGGGGCCTGGCTT +
Preference number: 6 (lower is better)
Translates to: AVKLSCAESVLL*AVMEMRGGAWL
Trigger: AAGCCAGGCCCCGCCCCGCATCTCCATCACCGCCCAGAGCAGCACCGACTCCGCGCACGAGAGCTTCACGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CAA 90 bp CAGCAGGTATGGGGCCCTGGCAGCAGGGCCCACGTCCATATGCTGTaGGTCAGCAAAGCGGGCTGGGCGGGGATGGCTGCCTCGGTCGCC +
Preference number: 6 (lower is better)
Translates to: QQVWGPGSRAHVHML*VSKAGWAGMAASVA
Trigger: GGCGACCGAGGCAGCCATCCCCGCCCAGCCCGCTTTGCTGACCAACAGCATATGGACGTGGGCCCTGCTGCCAGGGCCCCATACCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235180.4
ENST00000373347.6
ENST00000495979.1
CDS CCA 72 bp GGGGCCCTGGCAGCAGGGCCCACGTCCATATGCTGTTaGTCAGCAAAGCGGGCTGGGCGGGGATGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: GALAAGPTSICC*SAKRAGRGWLP
Trigger: AGGCAGCCATCCCCGCCCAGCCCGCTTTGCTGACCAACAGCATATGGACGTGGGCCCTGCTGCCAGGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235180.4
ENST00000373347.6
ENST00000495979.1
CDS CAA 72 bp TGGGGCCCTGGCAGCAGGGCCCACGTCCATATGCTGTaGGTCAGCAAAGCGGGCTGGGCGGGGATGGCTGCC +
Preference number: 6 (lower is better)
Translates to: WGPGSRAHVHML*VSKAGWAGMAA
Trigger: GGCAGCCATCCCCGCCCAGCCCGCTTTGCTGACCAACAGCATATGGACGTGGGCCCTGCTGCCAGGGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235180.4
ENST00000373347.6
ENST00000495979.1
CDS CAA 72 bp GGCAGGGGTAGCGAGGAGGGGCAGGCAGTCGTCGTCTaGAGAGCAGCCGGCCTGGATGGCCCGGAGGTAGCT +
Preference number: 6 (lower is better)
Translates to: GRGSEEGQAVVV*RAAGLDGPEVA
Trigger: AGCTACCTCCGGGCCATCCAGGCCGGCTGCTCTCAAGACGACGACTGCCTGCCCCTCCTCGCTACCCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS TCA 72 bp CAAGGCAGCGGCCTTCCGACCCGCCCGAGCGCCCCTTaGAGCTCAAGTCCCGGTAGGACCCATCTGGACCCT +
Preference number: 6 (lower is better)
Translates to: QGSGLPTRPSAP*SSSPGRTHLDP
Trigger: AGGGTCCAGATGGGTCCTACCGGGACTTGAGCTTCAAGGGGCGCTCGGGCGGGTCGGAAGGCCGCTGCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS GCA 72 bp AGGTATGGGGCCCTGGCAGCAGGGCCCACGTCCATATaGTGTTGGTCAGCAAAGCGGGCTGGGCGGGGATGG +
Preference number: 6 (lower is better)
Translates to: RYGALAAGPTSI*CWSAKRAGRGW
Trigger: CCATCCCCGCCCAGCCCGCTTTGCTGACCAACAGCATATGGACGTGGGCCCTGCTGCCAGGGCCCCATACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235180.4
ENST00000373347.6
ENST00000495979.1
CDS GCA 72 bp GCTGTTGGTCAGCAAAGCGGGCTGGGCGGGGATGGCTaGCTCGGTCGCCATGGTAACCCCTCATGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: AVGQQSGLGGDG*LGRHGNPSWPQ
Trigger: CTGAGGCCATGAGGGGTTACCATGGCGACCGAGGCAGCCATCCCCGCCCAGCCCGCTTTGCTGACCAACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373347.6
ENST00000495979.1
CDS CCA 72 bp TTGCCTGGCCCGGCCCCCGGGTATCCATCCCGGCCCTaGCTGACCATCATGGTATGCCAGGCACTTCGCTTG +
Preference number: 6 (lower is better)
Translates to: LPGPAPGYPSRP*LTIMVCQALRL
Trigger: CAAGCGAAGTGCCTGGCATACCATGATGGTCAGCCAGGGCCGGGATGGATACCCGGGGGCCGGGCCAGGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CCA 72 bp GTAGCCAGGGATGGAGCTCCGGGGGTGGATCCGGGGTaGGACACAGCAGTTGATCCTGGCCTGGTCCACGCT +
Preference number: 6 (lower is better)
Translates to: VARDGAPGVDPG*DTAVDPGLVHA
Trigger: AGCGTGGACCAGGCCAGGATCAACTGCTGTGTCCCACCCCGGATCCACCCCCGGAGCTCCATCCCTGGCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS TCA 72 bp TCCTGGCCTGGTCCACGCTGGAGGAGCGACGGGTGGTaGAGCGTCGGGCGACTGCTTTGGGAGATGTCTTGG +
Preference number: 6 (lower is better)
Translates to: SWPGPRWRSDGW*SVGRLLWEMSW
Trigger: CCAAGACATCTCCCAAAGCAGTCGCCCGACGCTTCACCACCCGTCGCTCCTCCAGCGTGGACCAGGCCAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CCA 72 bp GCCCACGTCCATATGCTGTTGGTCAGCAAAGCGGGCTaGGCGGGGATGGCTGCCTCGGTCGCCATGGTAACC +
Preference number: 6 (lower is better)
Translates to: AHVHMLLVSKAG*AGMAASVAMVT
Trigger: GGTTACCATGGCGACCGAGGCAGCCATCCCCGCCCAGCCCGCTTTGCTGACCAACAGCATATGGACGTGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235180.4
ENST00000373347.6
ENST00000495979.1
CDS CCA 72 bp TGGCCCACACAGTCTTCACAGGTGTCGAAGGGGCCCTaGCCAGGGTACATCCTGGGGAAGGTGCTGCTACCC +
Preference number: 6 (lower is better)
Translates to: WPTQSSQVSKGP*PGYILGKVLLP
Trigger: GGGTAGCAGCACCTTCCCCAGGATGTACCCTGGCCAGGGCCCCTTCGACACCTGTGAAGACTGTGTGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CCA 72 bp GCACCTGCAGATAGTGATAAGTCCTGGCTTTGGCCTTaGTCTCCGGACCCAGGAGCCCCTTGCCTGGCCCGG +
Preference number: 6 (lower is better)
Translates to: APADSDKSWLWP*SPDPGAPCLAR
Trigger: CCGGGCCAGGCAAGGGGCTCCTGGGTCCGGAGACCAAGGCCAAAGCCAGGACTTATCACTATCTGCAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS TCA 72 bp GAACTCCCTCCGGCTCCTGTTCTCGGTGTCCGAATCTaGGATCGTCTCCACCTGCACCCCAATGGACGGCCG +
Preference number: 6 (lower is better)
Translates to: ELPPAPVLGVRI*DRLHLHPNGRP
Trigger: CGGCCGTCCATTGGGGTGCAGGTGGAGACGATCTCAGATTCGGACACCGAGAACAGGAGCCGGAGGGAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS GCA 72 bp AGCTCCCCAAACACCGACCCGCACACGGCCTCCAGCTaGTGGTTCAACTCATCGCTGAGCTGTCCAGTGGTG +
Preference number: 6 (lower is better)
Translates to: SSPNTDPHTASS*WFNSSLSCPVV
Trigger: CACCACTGGACAGCTCAGCGATGAGTTGAACCAGCAGCTGGAGGCCGTGTGCGGGTCGGTGTTTGGGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CCA 72 bp TCCCCAAACACCGACCCGCACACGGCCTCCAGCTGCTaGTTCAACTCATCGCTGAGCTGTCCAGTGGTGAGG +
Preference number: 6 (lower is better)
Translates to: SPNTDPHTASSC*FNSSLSCPVVR
Trigger: CCTCACCACTGGACAGCTCAGCGATGAGTTGAACCAGCAGCTGGAGGCCGTGTGCGGGTCGGTGTTTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS TCA 72 bp ATGCCAGGCACTTCGCTTGACCGACTGTCCATCCAGTaGCATGGACATGCCAGTGCAGGCAAGGCAGCGGCC +
Preference number: 6 (lower is better)
Translates to: MPGTSLDRLSIQ*HGHASAGKAAA
Trigger: GGCCGCTGCCTTGCCTGCACTGGCATGTCCATGTCACTGGATGGACAGTCGGTCAAGCGAAGTGCCTGGCAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CAA 72 bp CAGGCCCCAGGAACCTCCATCCAGGGTGTCCCATCCTaGATGTCAGGATCCCCACCACCAGGCAGAAGCCTA +
Preference number: 6 (lower is better)
Translates to: QAPGTSIQGVPS*MSGSPPPGRSL
Trigger: TAGGCTTCTGCCTGGTGGTGGGGATCCTGACATCAAGGATGGGACACCCTGGATGGAGGTTCCTGGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373347.6
ENST00000495979.1
CDS CAA 90 bp CCATCCCGGCCCTGGCTGACCATCATGGTATGCCAGGCACTTCGCTaGACCGACTGTCCATCCAGTGACATGGACATGCCAGTGCAGGCA +
Preference number: 6 (lower is better)
Translates to: PSRPWLTIMVCQALR*TDCPSSDMDMPVQA
Trigger: TGCCTGCACTGGCATGTCCATGTCACTGGATGGACAGTCGGTCAAGCGAAGTGCCTGGCATACCATGATGGTCAGCCAGGGCCGGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS TCA 72 bp CTGCCTGCACGCCAGCCGTCACACTATTGGAGCGCTTaGACCTTGCTCGCCTCTTGTCCTCTTCCACCTGCA +
Preference number: 6 (lower is better)
Translates to: LPARQPSHYWSA*TLLASCPLPPA
Trigger: TGCAGGTGGAAGAGGACAAGAGGCGAGCAAGGTTCAAGCGCTCCAATAGTGTGACGGCTGGCGTGCAGGCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS GCA 72 bp GGGTATCCATCCCGGCCCTGGCTGACCATCATGGTATaGCAGGCACTTCGCTTGACCGACTGTCCATCCAGT +
Preference number: 6 (lower is better)
Translates to: GYPSRPWLTIMV*QALRLTDCPSS
Trigger: ACTGGATGGACAGTCGGTCAAGCGAAGTGCCTGGCATACCATGATGGTCAGCCAGGGCCGGGATGGATACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS GCA 72 bp CGCTTGAACCTTGCTCGCCTCTTGTCCTCTTCCACCTaGACGCCAATAGAGTGGAACTCCCTCCGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: RLNLARLLSSST*TPIEWNSLRLL
Trigger: CAGGAGCCGGAGGGAGTTCCACTCTATTGGCGTGCAGGTGGAAGAGGACAAGAGGCGAGCAAGGTTCAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CCA 72 bp CGCCTCTTGTCCTCTTCCACCTGCACGCCAATAGAGTaGAACTCCCTCCGGCTCCTGTTCTCGGTGTCCGAA +
Preference number: 6 (lower is better)
Translates to: RLLSSSTCTPIE*NSLRLLFSVSE
Trigger: TTCGGACACCGAGAACAGGAGCCGGAGGGAGTTCCACTCTATTGGCGTGCAGGTGGAAGAGGACAAGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CAA 72 bp TCTGCCTGCACGCCAGCCGTCACACTATTGGAGCGCTaGAACCTTGCTCGCCTCTTGTCCTCTTCCACCTGC +
Preference number: 6 (lower is better)
Translates to: SACTPAVTLLER*NLARLLSSSTC
Trigger: GCAGGTGGAAGAGGACAAGAGGCGAGCAAGGTTCAAGCGCTCCAATAGTGTGACGGCTGGCGTGCAGGCAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CAA 72 bp AGCTCCAGGTCTGCCTGCACGCCAGCCGTCACACTATaGGAGCGCTTGAACCTTGCTCGCCTCTTGTCCTCT +
Preference number: 6 (lower is better)
Translates to: SSRSACTPAVTL*ERLNLARLLSS
Trigger: AGAGGACAAGAGGCGAGCAAGGTTCAAGCGCTCCAATAGTGTGACGGCTGGCGTGCAGGCAGACCTGGAGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CAA 72 bp CCCTGGCTGACCATCATGGTATGCCAGGCACTTCGCTaGACCGACTGTCCATCCAGTGACATGGACATGCCA +
Preference number: 6 (lower is better)
Translates to: PWLTIMVCQALR*TDCPSSDMDMP
Trigger: TGGCATGTCCATGTCACTGGATGGACAGTCGGTCAAGCGAAGTGCCTGGCATACCATGATGGTCAGCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6
CDS CAA 90 bp GGAGGGACCTTCTTCTCCTCCTTAGGCTCCAGGAGTTTCCAGCTGTaGGCCTTGAGTTGCTGTAGCTCCAGGAACTTGAGGGTCACATCC +
Preference number: 6 (lower is better)
Translates to: GGTFFSSLGSRSFQL*ALSCCSSRNLRVTS
Trigger: GGATGTGACCCTCAAGTTCCTGGAGCTACAGCAACTCAAGGCCAACAGCTGGAAACTCCTGGAGCCTAAGGAGGAGAAGAAGGTCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235180.4
ENST00000373347.6