RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DLG3 (Homo sapiens)

Ensembl gene IDs: ENSG00000082458

Ensembl transcript IDs: ENST00000194900.8, ENST00000374355.7, ENST00000374360.8, ENST00000461646.1, ENST00000463252.5, ENST00000466140.5, ENST00000489733.5, ENST00000494493.1, ENST00000496931.1, ENST00000542398.1

Found 890 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGCCAAGCACTTCTCTGTTCTCCCCTGCGTCGTCCCTCCAGTATaGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTGGGGT +
Preference number: 1 (lower is better)
Translates to: RAKHFSVLPCVVPPV*RRGRHVGFKGAQWG
Trigger: ACCCCACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGGGGAGAACAGAGAAGTGCTTGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CCA 90 bp CCATCCCAGCACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTaGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTC +
Preference number: 1 (lower is better)
Translates to: PSQHRTGRQVTPCPC*WNPGRNLSRALRVL
Trigger: GAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTGCTGGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 90 bp AACAAGTGCCTCAATCCTAGGGCCAAGCACTTCTCTGTTCTCCCCTaGGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTC +
Preference number: 1 (lower is better)
Translates to: NKCLNPRAKHFSVLP*VVPPVWRRGRHVGF
Trigger: GAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGGGGAGAACAGAGAAGTGCTTGGCCCTAGGATTGAGGCACTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CCA 90 bp ACGCGGAGCATCATTAGCCATTCTCTCTGTCCGCACACAGGACTCTaGCTGCACCTCAGGGGCAGCAGCTGCTTTCAGGTCAAGTCTCTC +
Preference number: 1 (lower is better)
Translates to: TRSIISHSLCPHTGL*LHLRGSSCFQVKSL
Trigger: GAGAGACTTGACCTGAAAGCAGCTGCTGCCCCTGAGGTGCAGCCAGAGTCCTGTGTGCGGACAGAGAGAATGGCTAATGATGCTCCGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CCA 90 bp CCTCCTCAGAGGGCTATGGGGATGACTGCTGTCCTGCTCTGCAAATaGGCCCATCCCACCCTCATTTTCGGAAACACTGGTAGCTGGCAG +
Preference number: 1 (lower is better)
Translates to: PPQRAMGMTAVLLCK*AHPTLIFGNTGSWQ
Trigger: CTGCCAGCTACCAGTGTTTCCGAAAATGAGGGTGGGATGGGCCCATTTGCAGAGCAGGACAGCAGTCATCCCCATAGCCCTCTGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 90 bp ACAAGTTGCAATGGCACCTGCCACGTCAGAACTGCCAGAACTGCCTaGTCTAAGCATCCCTCCCCTCCTCAGAGGGCTATGGGGATGACT +
Preference number: 1 (lower is better)
Translates to: TSCNGTCHVRTARTA*SKHPSPPQRAMGMT
Trigger: AGTCATCCCCATAGCCCTCTGAGGAGGGGAGGGATGCTTAGAGCAGGCAGTTCTGGCAGTTCTGACGTGGCAGGTGCCATTGCAACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTaGCCACGCCCTCCCTTCTCAACTACTTTAAGAAGGTCTCTGAGC +
Preference number: 1 (lower is better)
Translates to: EPSGPQKFGMFFPLL*PRPPFSTTLRRSLS
Trigger: GCTCAGAGACCTTCTTAAAGTAGTTGAGAAGGGAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 90 bp AAAAACCAAATCAAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTaGTGTCCCGCCATCCCAGCACAGAACTGGAAGGCAAGTGACTCC +
Preference number: 1 (lower is better)
Translates to: KNQIKLMTQLAKQAK*CPAIPAQNWKASDS
Trigger: GGAGTCACTTGCCTTCCAGTTCTGTGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTTGATTTGGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 90 bp GCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTaGCATCAGACTCTGGGAAAAAGCAACAAGGTTTCACAGCTCACC +
Preference number: 1 (lower is better)
Translates to: AACTCGGEDSLDHSH*HQTLGKSNKVSQLT
Trigger: GGTGAGCTGTGAAACCTTGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 90 bp CAGTCGGCTGTCACTTTATCCCTTTTTGCCTTCAAGCCATTGTACTaGCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTC +
Preference number: 1 (lower is better)
Translates to: QSAVTLSLFAFKPLY*PGKAAVLSLSSSWV
Trigger: GACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAGTACAATGGCTTGAAGGCAAAAAGGGATAAAGTGACAGCCGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR TCA 90 bp CCCTTTGGGGTTTCCAAGTTGCTCTGTATCTTCTCGTGCTGGGGCTaGATGTTCTTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTG +
Preference number: 1 (lower is better)
Translates to: PFGVSKLLCIFSCWG*MFFSCTSTRRTSAV
Trigger: CACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGATACAGAGCAACTTGGAAACCCCAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 90 bp GCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATaGAGGAATGGGCACAGTCACATGATGAATGAGATGGCATCATCC +
Preference number: 1 (lower is better)
Translates to: ALMDFAPVLALGKGP*RNGHSHMMNEMASS
Trigger: GGATGATGCCATCTCATTCATCATGTGACTGTGCCCATTCCTGCATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 90 bp TCTCTGCTACTAAATCAGGCCCCTGCTTTCTCTAACACACACCTCTaGTACAGCAGGCCTCTCCCACCTTGTGTACCTCTTGGGAAAATG +
Preference number: 1 (lower is better)
Translates to: SLLLNQAPAFSNTHL*YSRPLPPCVPLGKM
Trigger: CATTTTCCCAAGAGGTACACAAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCTGATTTAGTAGCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 90 bp AGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTaGTCTGTATCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTA +
Preference number: 1 (lower is better)
Translates to: STAVLRVCLPLGFPS*SVSSRAGAECSSAV
Trigger: TACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGATACAGAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CCA 90 bp TTGTACTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTaGGTCCCATGCTTTATACAGTTAGCCTCATTCTGCTGGTTGGAC +
Preference number: 1 (lower is better)
Translates to: LYCPGKAAVLSLSSS*VPCFIQLASFCWLD
Trigger: GTCCAACCAGCAGAATGAGGCTAACTGTATAAAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAGTACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 90 bp AGGAGCATCTCATCATGTGGTGCATTTAGCTCACTTCACAAGCCGTaGAGCTGTCCAGAGTCTGTCTTTCCATCAGTCCTCCTCTTTTCT +
Preference number: 1 (lower is better)
Translates to: RSISSCGAFSSLHKP*SCPESVFPSVLLFS
Trigger: AGAAAAGAGGAGGACTGATGGAAAGACAGACTCTGGACAGCTGCACGGCTTGTGAAGTGAGCTAAATGCACCACATGATGAGATGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 90 bp TTGCACCGTTCAGAGCTGCAAGACAGCAGTACAGATAGGGAGAAATaGCCAGGAGCATCTCATCATGTGGTGCATTTAGCTCACTTCACA +
Preference number: 1 (lower is better)
Translates to: LHRSELQDSSTDREK*PGASHHVVHLAHFT
Trigger: TGTGAAGTGAGCTAAATGCACCACATGATGAGATGCTCCTGGGCATTTCTCCCTATCTGTACTGCTGTCTTGCAGCTCTGAACGGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CCA 90 bp GTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTaGGAAAAAGCAACAAGGTTTCACAGCTCACCAGTAAGCGAATCT +
Preference number: 1 (lower is better)
Translates to: VAVKIPLITVTAIRL*EKATRFHSSPVSES
Trigger: AGATTCGCTTACTGGTGAGCTGTGAAACCTTGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CCA 90 bp GGGGACTCCCTTTTGTTAGGCTGCCTTCAAGCAAATGAGAGAATGTaGGAAAGCAAGCAACCTGCACACCATAAAGCACCACAAGCAAGA +
Preference number: 1 (lower is better)
Translates to: GDSLLLGCLQANERM*ESKQPAHHKAPQAR
Trigger: TCTTGCTTGTGGTGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAGGCAGCCTAACAAAAGGGAGTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR TCA 90 bp GCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTaGAGACAGAGCCTCAACAGTGTGACCACAGGACAGATCTTTGTT +
Preference number: 1 (lower is better)
Translates to: AECSSAVPPLGEHQL*RQSLNSVTTGQIFV
Trigger: AACAAAGATCTGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR TCA 90 bp CACATTTCAGGTGGCTCATTCATCCAGATGTTGCTCTTGACCTTATaGATTATGACAGCACTTCCTAAGACTCCTCCGCACAAGTTGCAA +
Preference number: 1 (lower is better)
Translates to: HISGGSFIQMLLLTL*IMTALPKTPPHKLQ
Trigger: TTGCAACTTGTGCGGAGGAGTCTTAGGAAGTGCTGTCATAATTCATAAGGTCAAGAGCAACATCTGGATGAATGAGCCACCTGAAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTCCGCACACAGGACTCTaGCTGCACCTCAGGGGCAGC +
Preference number: 2 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSPHTGL*LHLRGS
Trigger: GCTGCCCCTGAGGTGCAGCCAGAGTCCTGTGTGCGG...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTCCGCACACAGGACTCTaGCTGCACCTCAGGGGCAGC +
Preference number: 2 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLPHTGL*LHLRGS
Trigger: GCTGCCCCTGAGGTGCAGCCAGAGTCCTGTGTGCGG...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CAA 90 bp GCCATCCCAGCACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTaGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCT +
Preference number: 2 (lower is better)
Translates to: AIPAQNWKASDSLSL*VEPRKEPQQSPPCP
Trigger: AGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTGCTGGGATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCACACAGGACTCTGGCTaGACCTCAGGGGCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRTQDSG*TSGAAA
Trigger: AGCTGCTGCCCCTGAGGTGCAGCCAGAGTCCTGTGT...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGTCTCCGGCCTCAGGCTaGCCCCTCCTAGCTCTCAAG +
Preference number: 2 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGSPASG*PLLALK
Trigger: CTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGA...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGCCAAGCAAGCCAAGTaGTGTCCCGCCATCCCAGCA +
Preference number: 2 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPAKQAK*CPAIPA
Trigger: TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGC...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTGCCAAGCAAGCCAAGTaGTGTCCCGCCATCCCAGCA +
Preference number: 2 (lower is better)
Translates to: LPRESRCPFLILILGPMLAKQAK*CPAIPA
Trigger: TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGC...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCCAACATTGCCTCGCTTaGACCAGCCCTAACCCAGCG +
Preference number: 2 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALQHCLA*TSPNPA
Trigger: CGCTGGGTTAGGGCTGGTGCAAGCGAGGCAATGTTG...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCAACATTGCCTCGCTTaGACCAGCCCTAACCCAGCG +
Preference number: 2 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRQHCLA*TSPNPA
Trigger: CGCTGGGTTAGGGCTGGTGCAAGCGAGGCAATGTTG...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTCTTGGGAAAGGTCCATaGAGGAATGGGCACAGTCAC +
Preference number: 2 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSLGKGP*RNGHSH
Trigger: GTGACTGTGCCCATTCCTGCATGGACCTTTCCCAAG...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTTCACTTCACAAGCCGTaGAGCTGTCCAGAGTCTGTC +
Preference number: 2 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSSLHKP*SCPESV
Trigger: GACAGACTCTGGACAGCTGCACGGCTTGTGAAGTGA...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp GGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGTCACCACCCCCTCAGGGGCAGCAGCTaGTTTCAGGTCAAGTCTCTC +
Preference number: 2 (lower is better)
Translates to: GWGGRPSTQLSQRACHHPLRGSS*FQVKSL
Trigger: GAGAGACTTGACCTGAAAGCAGCTGCTGCCCCTGAG...GGGGTGGTGACAGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATACACAGGACTCTGGCTaGACCTCAGGGGCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHTQDSG*TSGAAA
Trigger: AGCTGCTGCCCCTGAGGTGCAGCCAGAGTCCTGTGT...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTGCGAGGGAGGCACGTTaGCTTCAAAGGAGCACAGTG +
Preference number: 2 (lower is better)
Translates to: LPRESRCPFLILILGPMLAREAR*LQRSTV
Trigger: CACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGC...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTGCGAGGGAGGCACGTTaGCTTCAAAGGAGCACAGTG +
Preference number: 2 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLAREAR*LQRSTV
Trigger: CACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGC...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGGTCGTCCCTCCAGTATaGAGGCGAGGGAGGCACGTT +
Preference number: 2 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGVVPPV*RRGRHV
Trigger: AACGTGCCTCCCTCGCCTCCATACTGGAGGGACGAC...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTTGCTTTCCCTTCTGCTaGCAGGACAACCAGGCCTGT +
Preference number: 2 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLCFPFC*QDNQAC
Trigger: ACAGGCCTGGTTGTCCTGTCAGCAGAAGGGAAAGCA...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTCCCAGCTCGGCTAGCTaGTCATCACTAAGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLPSSAS*SSLRRE
Trigger: CTCTCTCCTTAGTGATGATCAGCTAGCCGAGCTGGG...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCTTGGGAAAGGTCCATaGAGGAATGGGCACAGTCAC +
Preference number: 2 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRLGKGP*RNGHSH
Trigger: GTGACTGTGCCCATTCCTGCATGGACCTTTCCCAAG...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTACCACACCTGCTGCCTaGACTTGTGGCGGTGAAGAT +
Preference number: 2 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLTTPAA*TCGGED
Trigger: ATCTTCACCGCCACAAGTGCAGGCAGCAGGTGTGGT...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTTTCTCTGTTCTCCCCTaGGTCGTCCCTCCAGTATGG +
Preference number: 2 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLFSVLP*VVPPVW
Trigger: CCATACTGGAGGGACGACGCAGGGGAGAACAGAGAA...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCACTGCTGTCCTGCTCTaGAAATGGGCCCATCCCACC +
Preference number: 2 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLTAVLL*KWAHPT
Trigger: GGTGGGATGGGCCCATTTGCAGAGCAGGACAGCAGT...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCCTCCTCCGCACAAGTTaGAATGGCACCTGCCACGTC +
Preference number: 2 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLLLRTS*NGTCHV
Trigger: GACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAG...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CAA 90 bp GACACGGCACAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTaGGGGTTTCCAAGTTGCTCTGTATCTTCTCGTGCTGGGGCTGAA +
Preference number: 2 (lower is better)
Translates to: DTAQHSTAVLRVCLP*GFPSCSVSSRAGAE
Trigger: TTCAGCCCCAGCACGAGAAGATACAGAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTGTGCCGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATTCTCCGGCCTCAGGCTaGCCCCTCCTAGCTCTCAAG +
Preference number: 2 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHSPASG*PLLALK
Trigger: CTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGA...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCTGCTTTCCCTTCTGCTaGCAGGACAACCAGGCCTGT +
Preference number: 2 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLCFPFC*QDNQAC
Trigger: ACAGGCCTGGTTGTCCTGTCAGCAGAAGGGAAAGCA...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATTGCTTTCCCTTCTGCTaGCAGGACAACCAGGCCTGT +
Preference number: 2 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHCFPFC*QDNQAC
Trigger: ACAGGCCTGGTTGTCCTGTCAGCAGAAGGGAAAGCA...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCCCCAGCTCGGCTAGCTaGTCATCACTAAGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCPSSAS*SSLRRE
Trigger: CTCTCTCCTTAGTGATGATCAGCTAGCCGAGCTGGG...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTAGAGGGCTATGGGGATaGCTGCTGTCCTGCTCTGCA +
Preference number: 2 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTRGLWG*LLSCSA
Trigger: TGCAGAGCAGGACAGCAGTCATCCCCATAGCCCTCT...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTGGCTCTGATGGATTTTaGACCTGTGCTAGCGCTTGG +
Preference number: 2 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPGSDGF*TCASAW
Trigger: CCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCC...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATTCACTTCACAAGCCGTaGAGCTGTCCAGAGTCTGTC +
Preference number: 2 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENSLHKP*SCPESV
Trigger: GACAGACTCTGGACAGCTGCACGGCTTGTGAAGTGA...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGCTGTCGCCATTACGTTaGACCGTTCAGAGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRLSPLR*TVQSCK
Trigger: CTTGCAGCTCTGAACGGTGCAACGTAATGGCGACAG...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGCTCAGGGGCAGCAGCTaGTTTCAGGTCAAGTCTCTC +
Preference number: 2 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGLRGSS*FQVKSL
Trigger: GAGAGACTTGACCTGAAAGCAGCTGCTGCCCCTGAG...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGAAAGGAAACCTCTCATaGAGACACATCAGGTGGCAT +
Preference number: 2 (lower is better)
Translates to: PASSLQYGGEGGTLASKEKGNLS*RHIRWH
Trigger: ATGCCACCTGATGTGTCTGCATGAGAGGTTTCCTTT...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCTTCTCTGTTCTCCCCTaGGTCGTCCCTCCAGTATGG +
Preference number: 2 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLFSVLP*VVPPVW
Trigger: CCATACTGGAGGGACGACGCAGGGGAGAACAGAGAA...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTGGGCTAGGAAACAAGTaGCTCAATCCTAGGGCCAAG +
Preference number: 2 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLGLGNK*LNPRAK
Trigger: CTTGGCCCTAGGATTGAGGCACTTGTTTCCTAGCCC...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTAAGCATCCTCAACATTaGCTCGCTTGCACCAGCCCT +
Preference number: 2 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLKHPQH*LACTSP
Trigger: AGGGCTGGTGCAAGCGAGGCAATGTTGAGGATGCTT...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGACCTGTGCTAGCGCTTaGGAAAGGTCCATGCAGGAA +
Preference number: 2 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRTCASA*ERSMQE
Trigger: TTCCTGCATGGACCTTTCCCAAGCGCTAGCACAGGT...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTACCTGTGCTAGCGCTTaGGAAAGGTCCATGCAGGAA +
Preference number: 2 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPTCASA*ERSMQE
Trigger: TTCCTGCATGGACCTTTCCCAAGCGCTAGCACAGGT...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTCCCTTCCCAACCAGCTaGGATAGAAGATGCCATCTG +
Preference number: 2 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPPFPTS*DRRCHL
Trigger: CAGATGGCATCTTCTATCCCAGCTGGTTGGGAAGGG...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCCGCACACAGGACTCTaGCTGCACCTCAGGGGCAGC +
Preference number: 2 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKPHTGL*LHLRGS
Trigger: GCTGCCCCTGAGGTGCAGCCAGAGTCCTGTGTGCGG...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTCTCCATCACAAGGCCTaGCTCCTTCAGGACCTCATA +
Preference number: 2 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLLHHKA*LLQDLI
Trigger: TATGAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAG...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTATCCCAGCACAGAACTaGAAGGCAAGTGACTCCCTG +
Preference number: 2 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLIPAQN*KASDSL
Trigger: CAGGGAGTCACTTGCCTTCCAGTTCTGTGCTGGGAT...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGCTGTTGGGGAGGGGCTaGAGCAGAGCATATGAAGCA +
Preference number: 2 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGLLGRG*SRAYEA
Trigger: TGCTTCATATGCTCTGCTCCAGCCCCTCCCCAACAG...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCTGCACCGTTCAGAGCTaGAAGACAGCAGTACAGATA +
Preference number: 2 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRCTVQS*KTAVQI
Trigger: TATCTGTACTGCTGTCTTGCAGCTCTGAACGGTGCA...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGACACAGGACTCTGGCTaGACCTCAGGGGCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQTQDSG*TSGAAA
Trigger: AGCTGCTGCCCCTGAGGTGCAGCCAGAGTCCTGTGT...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATGCCAAGCAAGCCAAGTaGTGTCCCGCCATCCCAGCA +
Preference number: 2 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHAKQAK*CPAIPA
Trigger: TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGC...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTACCACACCTGCTGCCTaGACTTGTGGCGGTGAAGAT +
Preference number: 2 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTTTPAA*TCGGED
Trigger: ATCTTCACCGCCACAAGTGCAGGCAGCAGGTGTGGT...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCATCCCAGCACAGAACTaGAAGGCAAGTGACTCCCTG +
Preference number: 2 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCIPAQN*KASDSL
Trigger: CAGGGAGTCACTTGCCTTCCAGTTCTGTGCTGGGAT...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATATCCCAGCACAGAACTaGAAGGCAAGTGACTCCCTG +
Preference number: 2 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHIPAQN*KASDSL
Trigger: CAGGGAGTCACTTGCCTTCCAGTTCTGTGCTGGGAT...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCATCCCAGCACAGAACTaGAAGGCAAGTGACTCCCTG +
Preference number: 2 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLIPAQN*KASDSL
Trigger: CAGGGAGTCACTTGCCTTCCAGTTCTGTGCTGGGAT...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGGTCGTCCCTCCAGTATaGAGGCGAGGGAGGCACGTT +
Preference number: 2 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQVVPPV*RRGRHV
Trigger: AACGTGCCTCCCTCGCCTCCATACTGGAGGGACGAC...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTTGGCCCCCAAAAGTTTaGGATGTTCTTCCCACTGCT +
Preference number: 2 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPWPPKV*DVLPTA
Trigger: AGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCA...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTTGTCTGGGGCTGGGGTaGAAGACCAAGCACACAACT +
Preference number: 2 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTCLGLG*KTKHTT
Trigger: AGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACA...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CAA 90 bp AGAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTaGCCCACGCCCTCCCTTCTCAACTACTTTAAGAAGGTCTCTGAG +
Preference number: 2 (lower is better)
Translates to: RALWPPKVWDVLPTA*PTPSLLNYFKKVSE
Trigger: CTCAGAGACCTTCTTAAAGTAGTTGAGAAGGGAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CAACCAGGCCTGTGTCACCTACTCCATCACAAGGCCTGGCTCCTTCAGGACCTCACAGATAGGGAGAAATaGCCAGGAGCATCTCATCAT +
Preference number: 2 (lower is better)
Translates to: QPGLCHLLHHKAWLLQDLTDREK*PGASHH
Trigger: ATGATGAGATGCTCCTGGGCATTTCTCCCTATCTGT...GAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAGTAGGTGACACAGGCCTGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTACAGATAGGGAGAAATaGCCAGGAGCATCTCATCAT +
Preference number: 2 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSTDREK*PGASHH
Trigger: ATGATGAGATGCTCCTGGGCATTTCTCCCTATCTGT...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTTGCACCGTTCAGAGCTaGAAGACAGCAGTACAGATA +
Preference number: 2 (lower is better)
Translates to: LPRESRCPFLILILGPMLCTVQS*KTAVQI
Trigger: TATCTGTACTGCTGTCTTGCAGCTCTGAACGGTGCA...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTCTGTCGCCATTACGTTaGACCGTTCAGAGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTLSPLR*TVQSCK
Trigger: CTTGCAGCTCTGAACGGTGCAACGTAATGGCGACAG...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCCTCAGGGGCAGCAGCTaGTTTCAGGTCAAGTCTCTC +
Preference number: 2 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSLRGSS*FQVKSL
Trigger: GAGAGACTTGACCTGAAAGCAGCTGCTGCCCCTGAG...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTAAAGGAAACCTCTCATaGAGACACATCAGGTGGCAT +
Preference number: 2 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSKGNLS*RHIRWH
Trigger: ATGCCACCTGATGTGTCTGCATGAGAGGTTTCCTTT...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGCAACATTGCCTCGCTTaGACCAGCCCTAACCCAGCG +
Preference number: 2 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQQHCLA*TSPNPA
Trigger: CGCTGGGTTAGGGCTGGTGCAAGCGAGGCAATGTTG...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGCTCCTCCGCACAAGTTaGAATGGCACCTGCCACGTC +
Preference number: 2 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQLLRTS*NGTCHV
Trigger: GACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAG...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTCTCCATCACAAGGCCTaGCTCCTTCAGGACCTCATA +
Preference number: 2 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTLHHKA*LLQDLI
Trigger: TATGAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAG...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCTCCTTATCCTCATCCTaGGTCCCATGCTTTATACAG +
Preference number: 2 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALSLSSS*VPCFIQ
Trigger: CTGTATAAAGCATGGGACCCAGGATGAGGATAAGGA...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATAGCAGTGTCTGGGGCTaGGGTGGAAGACCAAGCACA +
Preference number: 2 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHSSVWG*GGRPST
Trigger: TGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGCT...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CAA 90 bp ACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTGTGTACCTCTaGGGAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCAT +
Preference number: 2 (lower is better)
Translates to: THTSATAGLSHLVYL*GKCQHFATTDVDSH
Trigger: ATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTCCCAAGAGGTACACAAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTACCAAATCAAACTCATaGCGCAGCTGGCCAAGCAAG +
Preference number: 2 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTTKSNS*RSWPSK
Trigger: CTTGCTTGGCCAGCTGCGTCATGAGTTTGATTTGGT...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTACAGATAGGGAGAAATaGCCAGGAGCATCTCATCAT +
Preference number: 2 (lower is better)
Translates to: LPRESRCPFLILILGPMLTDREK*PGASHH
Trigger: ATGATGAGATGCTCCTGGGCATTTCTCCCTATCTGT...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACAACACAGGACTCTGGCTaGACCTCAGGGGCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: VKIPLITVTAIRLWEKATTQDSG*TSGAAA
Trigger: AGCTGCTGCCCCTGAGGTGCAGCCAGAGTCCTGTGT...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTAAAGGAAACCTCTCATaGAGACACATCAGGTGGCAT +
Preference number: 2 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLKGNLS*RHIRWH
Trigger: ATGCCACCTGATGTGTCTGCATGAGAGGTTTCCTTT...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATACCACACCTGCTGCCTaGACTTGTGGCGGTGAAGAT +
Preference number: 2 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHTTPAA*TCGGED
Trigger: ATCTTCACCGCCACAAGTGCAGGCAGCAGGTGTGGT...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATTTCTCTGTTCTCCCCTaGGTCGTCCCTCCAGTATGG +
Preference number: 2 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHFSVLP*VVPPVW
Trigger: CCATACTGGAGGGACGACGCAGGGGAGAACAGAGAA...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCGGGCTAGGAAACAAGTaGCTCAATCCTAGGGCCAAG +
Preference number: 2 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVGLGNK*LNPRAK
Trigger: CTTGGCCCTAGGATTGAGGCACTTGTTTCCTAGCCC...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACAGAGAATCAACCTCCCTaGTCACCCCTCCTCACCAGA +
Preference number: 2 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTENQPP*SPLLTR
Trigger: TCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTC...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGGAGAATCAACCTCCCTaGTCACCCCTCCTCACCAGA +
Preference number: 2 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQENQPP*SPLLTR
Trigger: TCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTC...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCGCACGGTTGAGACTTTaGCACTTAGTTAACATCAGA +
Preference number: 2 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALARLRL*HLVNIR
Trigger: TCTGATGTTAACTAAGTGGCAAAGTCTCAACCGTGC...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGACTGCCAGAACTGCCTaGTCTAAGCATCCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQTARTA*SKHPSP
Trigger: AGGGGAGGGATGCTTAGAGCAGGCAGTTCTGGCAGT...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTAGCGAGGGAGGCACGTTaGCTTCAAAGGAGCACAGTG +
Preference number: 2 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLAREAR*LQRSTV
Trigger: CACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGC...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp GGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGTCACCACCCCCCTCATTCTGCTGGTTaGACAACTGTTAACAGAGTT +
Preference number: 2 (lower is better)
Translates to: GWGGRPSTQLSQRACHHPPHSAG*TTVNRV
Trigger: AACTCTGTTAACAGTTGTCCAACCAGCAGAATGAGG...GGGGTGGTGACAGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTCTGGGGCTGGGGTaGAAGACCAAGCACACAACT +
Preference number: 2 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQCLGLG*KTKHTT
Trigger: AGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACA...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTCAGTCACATGATGAATaGGATGGCATCATCCCAAAA +
Preference number: 2 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLQSHDE*DGIIPK
Trigger: TTTTGGGATGATGCCATCTCATTCATCATGTGACTG...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGCTTGGGAAAGGTCCATaGAGGAATGGGCACAGTCAC +
Preference number: 2 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQLGKGP*RNGHSH
Trigger: GTGACTGTGCCCATTCCTGCATGGACCTTTCCCAAG...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTCACTTCACAAGCCGTaGAGCTGTCCAGAGTCTGTC +
Preference number: 2 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQSLHKP*SCPESV
Trigger: GACAGACTCTGGACAGCTGCACGGCTTGTGAAGTGA...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGACAGATAGGGAGAAATaGCCAGGAGCATCTCATCAT +
Preference number: 2 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGTDREK*PGASHH
Trigger: ATGATGAGATGCTCCTGGGCATTTCTCCCTATCTGT...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACACTGTCGCCATTACGTTaGACCGTTCAGAGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTLSPLR*TVQSCK
Trigger: CTTGCAGCTCTGAACGGTGCAACGTAATGGCGACAG...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTAACCACACCTGCTGCCTaGACTTGTGGCGGTGAAGAT +
Preference number: 2 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLTTPAA*TCGGED
Trigger: ATCTTCACCGCCACAAGTGCAGGCAGCAGGTGTGGT...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGTTCTCTGTTCTCCCCTaGGTCGTCCCTCCAGTATGG +
Preference number: 2 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKFSVLP*VVPPVW
Trigger: CCATACTGGAGGGACGACGCAGGGGAGAACAGAGAA...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACAAAGCATCCTCAACATTaGCTCGCTTGCACCAGCCCT +
Preference number: 2 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTKHPQH*LACTSP
Trigger: AGGGCTGGTGCAAGCGAGGCAATGTTGAGGATGCTT...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCTCATCCTGGGTCCCATaGTTTATACAGTTAGCCTCA +
Preference number: 2 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLSSWVP*FIQLAS
Trigger: TGAGGCTAACTGTATAAAGCATGGGACCCAGGATGA...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGCACGGTTGAGACTTTaGCACTTAGTTAACATCAGA +
Preference number: 2 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPARLRL*HLVNIR
Trigger: TCTGATGTTAACTAAGTGGCAAAGTCTCAACCGTGC...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CAACCAGGCCTGTGTCACCTACTCCATCACAAGGCCTGGCTCCTTCAGGACCTCTGCAGACACATCAGGTaGCATAAAACAATAGGCAAT +
Preference number: 2 (lower is better)
Translates to: QPGLCHLLHHKAWLLQDLCRHIR*HKTIGN
Trigger: ATTGCCTATTGTTTTATGCCACCTGATGTGTCTGCA...GAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAGTAGGTGACACAGGCCTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCTGCAGACACATCAGGTaGCATAAAACAATAGGCAAT +
Preference number: 2 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALCRHIR*HKTIGN
Trigger: ATTGCCTATTGTTTTATGCCACCTGATGTGTCTGCA...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCAGTCGTCCCTCCAGTATaGAGGCGAGGGAGGCACGTT +
Preference number: 2 (lower is better)
Translates to: LQANERMWESKQPAHHKAVVPPV*RRGRHV
Trigger: AACGTGCCTCCCTCGCCTCCATACTGGAGGGACGAC...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTGGACTCCCATCTGGTTaGTGCTATTTGAAGCAGTGT +
Preference number: 2 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTGLPSG*CYLKQC
Trigger: ACACTGCTTCAAATAGCACCAACCAGATGGGAGTCC...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCATGTGGACTCCCATCTaGTTGGTGCTATTTGAAGCA +
Preference number: 2 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLMWTPI*LVLFEA
Trigger: TGCTTCAAATAGCACCAACCAGATGGGAGTCCACAT...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTGCAGGTCACTTTCTCTaGCCATTTTTCTCACCCAGT +
Preference number: 2 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTAGHFL*PFFSPS
Trigger: ACTGGGTGAGAAAAATGGCCAGAGAAAGTGACCTGC...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CAA 90 bp CAGGCCTCTCCCACCTTGTGTACCTCTTGGGAAAATGTCAGCATTTaGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAA +
Preference number: 2 (lower is better)
Translates to: QASPTLCTSWENVSI*PPQMWTPIWLVLFE
Trigger: TTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTCCCAAGAGGTACACAAGGTGGGAGAGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGACCAAATCAAACTCATaGCGCAGCTGGCCAAGCAAG +
Preference number: 2 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQTKSNS*RSWPSK
Trigger: CTTGCTTGGCCAGCTGCGTCATGAGTTTGATTTGGT...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCGTATCATGCTTACTTTaGATCTTTGTTTCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALVSCLL*IFVSLP
Trigger: GGGAAGAGAAACAAAGATTCAAAGTAAGCATGATAC...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATAGAGCCTCAACAGTGTaGCCACAGGACAGATCTTTG +
Preference number: 2 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHRASTV*PQDRSL
Trigger: CAAAGATCTGTCCTGTGGTCACACTGTTGAGGCTCT...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGGGCTCTGATGGATTTTaGACCTGTGCTAGCGCTTGG +
Preference number: 2 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKGSDGF*TCASAW
Trigger: CCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCC...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCTGCACCGTTCAGAGCTaGAAGACAGCAGTACAGATA +
Preference number: 2 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVCTVQS*KTAVQI
Trigger: TATCTGTACTGCTGTCTTGCAGCTCTGAACGGTGCA...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTTGCTACCATCTTCACTGTCGCCATTACGTTaGACCGTTCAGAGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: QENDQMRVPLVQHLLPSSLSPLR*TVQSCK
Trigger: CTTGCAGCTCTGAACGGTGCAACGTAATGGCGACAG...TGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACACTCAGGGGCAGCAGCTaGTTTCAGGTCAAGTCTCTC +
Preference number: 2 (lower is better)
Translates to: VKIPLITVTAIRLWEKATLRGSS*FQVKSL
Trigger: GAGAGACTTGACCTGAAAGCAGCTGCTGCCCCTGAG...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTAGGGCTAGGAAACAAGTaGCTCAATCCTAGGGCCAAG +
Preference number: 2 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLGLGNK*LNPRAK
Trigger: CTTGGCCCTAGGATTGAGGCACTTGTTTCCTAGCCC...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTTGCTACCATCTTCAACCTGTGCTAGCGCTTaGGAAAGGTCCATGCAGGAA +
Preference number: 2 (lower is better)
Translates to: QENDQMRVPLVQHLLPSSTCASA*ERSMQE
Trigger: TTCCTGCATGGACCTTTCCCAAGCGCTAGCACAGGT...TGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTTCCTTATCCTCATCCTaGGTCCCATGCTTTATACAG +
Preference number: 2 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTSLSSS*VPCFIQ
Trigger: CTGTATAAAGCATGGGACCCAGGATGAGGATAAGGA...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CAA 90 bp AGCTCTCAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTaGCTACCATCTTCAATCCCTTCCCAACCAGCTGGGATAGAAGAT +
Preference number: 2 (lower is better)
Translates to: SSQENDQMRVPLVQH*LPSSIPSQPAGIED
Trigger: ATCTTCTATCCCAGCTGGTTGGGAAGGGATTGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTGAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CAA 90 bp CTCCTTGGAAGAAACACTGGTAAACCCACTAGTATCATGCTTACTTaGAATCTTTGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACG +
Preference number: 2 (lower is better)
Translates to: LLGRNTGKPTSIMLT*NLCFSSLGGGGLST
Trigger: CGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACAAAGATTCAAAGTAAGCATGATACTAGTGGGTTTACCAGTGTTTCTTCCAAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCACTGGTTGGTGCTATTTaGAGCAGTGTCTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: LQANERMWESKQPAHHKALVGAI*SSVWGW
Trigger: CCAGCCCCAGACACTGCTTCAAATAGCACCAACCAG...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACATCACTTCACAAGCCGTaGAGCTGTCCAGAGTCTGTC +
Preference number: 2 (lower is better)
Translates to: VKIPLITVTAIRLWEKATSLHKP*SCPESV
Trigger: GACAGACTCTGGACAGCTGCACGGCTTGTGAAGTGA...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGCACCGTTCAGAGCTaGAAGACAGCAGTACAGATA +
Preference number: 2 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQCTVQS*KTAVQI
Trigger: TATCTGTACTGCTGTCTTGCAGCTCTGAACGGTGCA...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCAGAGAATCAACCTCCCTaGTCACCCCTCCTCACCAGA +
Preference number: 2 (lower is better)
Translates to: LQANERMWESKQPAHHKAENQPP*SPLLTR
Trigger: TCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTC...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCAAGCACAACATGGTTTTaGTTTAACAGCAGCTTAAAA +
Preference number: 2 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPASTTWF*FNSSLK
Trigger: TTTTAAGCTGCTGTTAAACCAAAACCATGTTGTGCT...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCAGCACAACATGGTTTTaGTTTAACAGCAGCTTAAAA +
Preference number: 2 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALSTTWF*FNSSLK
Trigger: TTTTAAGCTGCTGTTAAACCAAAACCATGTTGTGCT...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CAACCAGGCCTGTGTCACCTACTCCATCACAAGGCCTGGCTCCTTCAGGACCTCAGAACCTTGGCAAATTaGATTCTATGCATTCACTTA +
Preference number: 2 (lower is better)
Translates to: QPGLCHLLHHKAWLLQDLRTLAN*ILCIHL
Trigger: TAAGTGAATGCATAGAATCCAATTTGCCAAGGTTCT...GAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAGTAGGTGACACAGGCCTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTAAGCCTTTAGAACCTTaGCAAATTGGATTCTATGCA +
Preference number: 2 (lower is better)
Translates to: LPRESRCPFLILILGPMLKPLEP*QIGFYA
Trigger: TGCATAGAATCCAATTTGCCAAGGTTCTAAAGGCTT...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATGGCCCCCAAAAGTTTaGGATGTTCTTCCCACTGCT +
Preference number: 2 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLWPPKV*DVLPTA
Trigger: AGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCA...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATTCTCATGGAGCTCTTTaGGGACTCCCTTTTGTTAGG +
Preference number: 2 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHSHGAL*GLPFVR
Trigger: CCTAACAAAAGGGAGTCCCCAAAGAGCTCCATGAGA...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGGTATCATGCTTACTTTaGATCTTTGTTTCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGVSCLL*IFVSLP
Trigger: GGGAAGAGAAACAAAGATTCAAAGTAAGCATGATAC...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCTTTGTCCTCAGGAGATaGATTTTCTTAAGCTCTCAT +
Preference number: 2 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLFVLRR*IFLSSH
Trigger: ATGAGAGCTTAAGAAAATTCATCTCCTGAGGACAAA...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR GCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCAAGTTGCAATGGCACCTaGCACGTCAGAACTGCCAGA +
Preference number: 2 (lower is better)
Translates to: LQANERMWESKQPAHHKASCNGT*HVRTAR
Trigger: TCTGGCAGTTCTGACGTGGCAGGTGCCATTGCAACT...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCAACCTGTGCTAGCGCTTaGGAAAGGTCCATGCAGGAA +
Preference number: 2 (lower is better)
Translates to: LQANERMWESKQPAHHKATCASA*ERSMQE
Trigger: TTCCTGCATGGACCTTTCCCAAGCGCTAGCACAGGT...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTAGAACCTTGGCAAATTaGATTCTATGCATTCACTTA +
Preference number: 2 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLRTLAN*ILCIHL
Trigger: TAAGTGAATGCATAGAATCCAATTTGCCAAGGTTCT...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTAGAACCTTGGCAAATTaGATTCTATGCATTCACTTA +
Preference number: 2 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLRTLAN*ILCIHL
Trigger: TAAGTGAATGCATAGAATCCAATTTGCCAAGGTTCT...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCAAGCCTTTAGAACCTTaGCAAATTGGATTCTATGCA +
Preference number: 2 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLKPLEP*QIGFYA
Trigger: TGCATAGAATCCAATTTGCCAAGGTTCTAAAGGCTT...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCATTGCCACCACAGATGTaGACTCCCATCTGGTTGGTG +
Preference number: 2 (lower is better)
Translates to: LQANERMWESKQPAHHKALPPQM*TPIWLV
Trigger: CACCAACCAGATGGGAGTCCACATCTGTGGTGGCAA...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGCAGTCACATGATGAATaGGATGGCATCATCCCAAAA +
Preference number: 2 (lower is better)
Translates to: NNGSDGFCTCASAWERSMQSHDE*DGIIPK
Trigger: TTTTGGGATGATGCCATCTCATTCATCATGTGACTG...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCAACCAAATCAAACTCATaGCGCAGCTGGCCAAGCAAG +
Preference number: 2 (lower is better)
Translates to: LQANERMWESKQPAHHKATKSNS*RSWPSK
Trigger: CTTGCTTGGCCAGCTGCGTCATGAGTTTGATTTGGT...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGCACACACATTTCAGGTaGCTCATTCATCCAGATGTT +
Preference number: 2 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQHTHFR*LIHPDV
Trigger: AACATCTGGATGAATGAGCCACCTGAAATGTGTGTG...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTACAGTCACATGATGAATaGGATGGCATCATCCCAAAA +
Preference number: 2 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLQSHDE*DGIIPK
Trigger: TTTTGGGATGATGCCATCTCATTCATCATGTGACTG...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATTGCAGACACATCAGGTaGCATAAAACAATAGGCAAT +
Preference number: 2 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHCRHIR*HKTIGN
Trigger: ATTGCCTATTGTTTTATGCCACCTGATGTGTCTGCA...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR TCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATGTATCATGCTTACTTTaGATCTTTGTTTCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHVSCLL*IFVSLP
Trigger: GGGAAGAGAAACAAAGATTCAAAGTAAGCATGATAC...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCAGAACCTTGGCAAATTaGATTCTATGCATTCACTTA +
Preference number: 2 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVRTLAN*ILCIHL
Trigger: TAAGTGAATGCATAGAATCCAATTTGCCAAGGTTCT...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGAAGCCTTTAGAACCTTaGCAAATTGGATTCTATGCA +
Preference number: 2 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKKPLEP*QIGFYA
Trigger: TGCATAGAATCCAATTTGCCAAGGTTCTAAAGGCTT...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCATGCAGACACATCAGGTaGCATAAAACAATAGGCAAT +
Preference number: 2 (lower is better)
Translates to: LQANERMWESKQPAHHKACRHIR*HKTIGN
Trigger: ATTGCCTATTGTTTTATGCCACCTGATGTGTCTGCA...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CCA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGAGCACAACATGGTTTTaGTTTAACAGCAGCTTAAAA +
Preference number: 2 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKSTTWF*FNSSLK
Trigger: TTTTAAGCTGCTGTTAAACCAAAACCATGTTGTGCT...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CAA 90 bp TATATATATCTATATATAAATAAGATACTTTCTGTCGCCATTACGTaGCACCGTTCAGAGCTGCAAGACAGCAGTACAGATAGGGAGAAA +
Preference number: 2 (lower is better)
Translates to: YIYLYINKILSVAIT*HRSELQDSSTDREK
Trigger: TTTCTCCCTATCTGTACTGCTGTCTTGCAGCTCTGAACGGTGCAACGTAATGGCGACAGAAAGTATCTTATTTATATATAGATATATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR TCA 72 bp CTGTACCGATCCCCAGGACGGCCCAGCTCGGCTAGCTaGTCATCACTAAGGAGAGAGCCCTCTGGCCCCCAA +
Preference number: 3 (lower is better)
Translates to: LYRSPGRPSSAS*SSLRREPSGPQ
Trigger: TTGGGGGCCAGAGGGCTCTCTCCTTAGTGATGATCAGCTAGCCGAGCTGGGCCGTCCTGGGGATCGGTACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 72 bp CACACAGGACTCTGGCTGCACCTCAGGGGCAGCAGCTaGTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAG +
Preference number: 3 (lower is better)
Translates to: HTGLWLHLRGSS*FQVKSLTLSPQ
Trigger: CTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTGCCCCTGAGGTGCAGCCAGAGTCCTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 72 bp CTCAATCCTAGGGCCAAGCACTTCTCTGTTCTCCCCTaGGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCAC +
Preference number: 3 (lower is better)
Translates to: LNPRAKHFSVLP*VVPPVWRRGRH
Trigger: GTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGGGGAGAACAGAGAAGTGCTTGGCCCTAGGATTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CCA 72 bp CACTTCTCTGTTCTCCCCTGCGTCGTCCCTCCAGTATaGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCA +
Preference number: 3 (lower is better)
Translates to: HFSVLPCVVPPV*RRGRHVGFKGA
Trigger: TGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGGGGAGAACAGAGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 72 bp AATGGCACCTGCCACGTCAGAACTGCCAGAACTGCCTaGTCTAAGCATCCCTCCCCTCCTCAGAGGGCTATG +
Preference number: 3 (lower is better)
Translates to: NGTCHVRTARTA*SKHPSPPQRAM
Trigger: CATAGCCCTCTGAGGAGGGGAGGGATGCTTAGAGCAGGCAGTTCTGGCAGTTCTGACGTGGCAGGTGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CCA 72 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTaGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTC +
Preference number: 3 (lower is better)
Translates to: HRTGRQVTPCPC*WNPGRNLSRAL
Trigger: GAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCTCTGTCGCCATTACGTaGCACCGTTCAGAGCTGCAA +
Preference number: 3 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALSVAIT*HRSELQ
Trigger: TTGCAGCTCTGAACGGTGCAACGTAATGGCGACAGA...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCGACTCCCTGTCCCTGTaGGTGGAACCCAGGAAGGAA +
Preference number: 3 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLDSLSL*VEPRKE
Trigger: TTCCTTCCTGGGTTCCACCAACAGGGACAGGGAGTC...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCGACTCCCTGTCCCTGTaGGTGGAACCCAGGAAGGAA +
Preference number: 3 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCDSLSL*VEPRKE
Trigger: TTCCTTCCTGGGTTCCACCAACAGGGACAGGGAGTC...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCGCGGTGAAGATTCCCTaGATCACAGTCACTGCCATC +
Preference number: 3 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALAVKIP*ITVTAI
Trigger: GATGGCAGTGACTGTGATCAAGGGAATCTTCACCGC...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CCA 72 bp ATCATTAGCCATTCTCTCTGTCCGCACACAGGACTCTaGCTGCACCTCAGGGGCAGCAGCTGCTTTCAGGTC +
Preference number: 3 (lower is better)
Translates to: IISHSLCPHTGL*LHLRGSSCFQV
Trigger: GACCTGAAAGCAGCTGCTGCCCCTGAGGTGCAGCCAGAGTCCTGTGTGCGGACAGAGAGAATGGCTAATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATTCTGTCGCCATTACGTaGCACCGTTCAGAGCTGCAA +
Preference number: 3 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENSVAIT*HRSELQ
Trigger: TTGCAGCTCTGAACGGTGCAACGTAATGGCGACAGA...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp CAACCAGGCCTGTGTCACCTACTCCATCACAAGGCCTGGCTCCTTCAGGACCTCCCCTTAGTGCAGCACTaGCTACCATCTTCAATCCCT +
Preference number: 3 (lower is better)
Translates to: QPGLCHLLHHKAWLLQDLPLVQH*LPSSIP
Trigger: AGGGATTGAAGATGGTAGCAAGTGCTGCACTAAGGG...GAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAGTAGGTGACACAGGCCTGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTGCGGTGAAGATTCCCTaGATCACAGTCACTGCCATC +
Preference number: 3 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLAVKIP*ITVTAI
Trigger: GATGGCAGTGACTGTGATCAAGGGAATCTTCACCGC...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTGCGGTGAAGATTCCCTaGATCACAGTCACTGCCATC +
Preference number: 3 (lower is better)
Translates to: LPRESRCPFLILILGPMLAVKIP*ITVTAI
Trigger: GATGGCAGTGACTGTGATCAAGGGAATCTTCACCGC...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTTTTGCCTTCAAGCCATaGTACTGCCCAGGGAAAGCC +
Preference number: 3 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPFAFKP*YCPGKA
Trigger: GGCTTTCCCTGGGCAGTACAATGGCTTGAAGGCAAA...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCCTGGCCCCCAAAAGTTaGGGATGTTCTTCCCACTGC +
Preference number: 3 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLLAPKS*GCSSHC
Trigger: GCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAG...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CCA 72 bp ACAGCACTTCCTAAGACTCCTCCGCACAAGTTGCAATaGCACCTGCCACGTCAGAACTGCCAGAACTGCCTG +
Preference number: 3 (lower is better)
Translates to: TALPKTPPHKLQ*HLPRQNCQNCL
Trigger: CAGGCAGTTCTGGCAGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTGCTGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATTCTGTCGCCATTACGTaGCACCGTTCAGAGCTGCAA +
Preference number: 3 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHSVAIT*HRSELQ
Trigger: TTGCAGCTCTGAACGGTGCAACGTAATGGCGACAGA...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTAAAGCATCCTCAACATaGCCTCGCTTGCACCAGCCC +
Preference number: 3 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTKASST*PRLHQP
Trigger: GGGCTGGTGCAAGCGAGGCAATGTTGAGGATGCTTT...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATGTTCTTCCCACTGCTTaGCCCACGCCCTCCCTTCTC +
Preference number: 3 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHVLPTA*PTPSLL
Trigger: GAGAAGGGAGGGCGTGGGCAAAGCAGTGGGAAGAAC...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACAGTTCTTCCCACTGCTTaGCCCACGCCCTCCCTTCTC +
Preference number: 3 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTVLPTA*PTPSLL
Trigger: GAGAAGGGAGGGCGTGGGCAAAGCAGTGGGAAGAAC...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 72 bp TTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTaGCACGTCAGAACTGCCAGAACTGCCTGCTCTAAG +
Preference number: 3 (lower is better)
Translates to: FLRLLRTSCNGT*HVRTARTACSK
Trigger: CTTAGAGCAGGCAGTTCTGGCAGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CCA 72 bp GTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTaGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: VSILPPQMWTPI*LVLFEAVSGAG
Trigger: CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCCCTTAGTGCAGCACTaGCTACCATCTTCAATCCCT +
Preference number: 3 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHPLVQH*LPSSIP
Trigger: AGGGATTGAAGATGGTAGCAAGTGCTGCACTAAGGG...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 72 bp GGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTaGCCACGCCCTCCCTTCTCAACTACTTTAAGAAGG +
Preference number: 3 (lower is better)
Translates to: GPQKFGMFFPLL*PRPPFSTTLRR
Trigger: CCTTCTTAAAGTAGTTGAGAAGGGAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACAAAAGCATCCTCAACATaGCCTCGCTTGCACCAGCCC +
Preference number: 3 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTKASST*PRLHQP
Trigger: GGGCTGGTGCAAGCGAGGCAATGTTGAGGATGCTTT...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCAGGCGAGGGAGGCACGTaGGCTTCAAAGGAGCACAGT +
Preference number: 3 (lower is better)
Translates to: LQANERMWESKQPAHHKAGEGGT*ASKEHS
Trigger: ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCC...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTAAAAGCATCCTCAACATaGCCTCGCTTGCACCAGCCC +
Preference number: 3 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLKASST*PRLHQP
Trigger: GGGCTGGTGCAAGCGAGGCAATGTTGAGGATGCTTT...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATTTTGCCTTCAAGCCATaGTACTGCCCAGGGAAAGCC +
Preference number: 3 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHFAFKP*YCPGKA
Trigger: GGCTTTCCCTGGGCAGTACAATGGCTTGAAGGCAAA...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCTCACTTTATCCCTTTTaGCCTTCAAGCCATTGTACT +
Preference number: 3 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRSLYPF*PSSHCT
Trigger: AGTACAATGGCTTGAAGGCAAAAAGGGATAAAGTGA...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCAGTTCTTCCCACTGCTTaGCCCACGCCCTCCCTTCTC +
Preference number: 3 (lower is better)
Translates to: LQANERMWESKQPAHHKAVLPTA*PTPSLL
Trigger: GAGAAGGGAGGGCGTGGGCAAAGCAGTGGGAAGAAC...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR TCA 72 bp TCTTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTaGAGACAGAGCCTCAACAGTGTGACCACAGGACAG +
Preference number: 3 (lower is better)
Translates to: SSAVPPLGEHQL*RQSLNSVTTGQ
Trigger: CTGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CCA 72 bp CCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTaGGTCCCATGCTTTATACAGTTAGCCTCATTCTGC +
Preference number: 3 (lower is better)
Translates to: PGKAAVLSLSSS*VPCFIQLASFC
Trigger: GCAGAATGAGGCTAACTGTATAAAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 72 bp GATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATaGAGGAATGGGCACAGTCACATGATGAATGAGATG +
Preference number: 3 (lower is better)
Translates to: DFAPVLALGKGP*RNGHSHMMNEM
Trigger: CATCTCATTCATCATGTGACTGTGCCCATTCCTGCATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 72 bp TCATCATGTGGTGCATTTAGCTCACTTCACAAGCCGTaGAGCTGTCCAGAGTCTGTCTTTCCATCAGTCCTC +
Preference number: 3 (lower is better)
Translates to: SSCGAFSSLHKP*SCPESVFPSVL
Trigger: GAGGACTGATGGAAAGACAGACTCTGGACAGCTGCACGGCTTGTGAAGTGAGCTAAATGCACCACATGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 72 bp TACTTTCTGTCGCCATTACGTTGCACCGTTCAGAGCTaGAAGACAGCAGTACAGATAGGGAGAAATGCCCAG +
Preference number: 3 (lower is better)
Translates to: YFLSPLRCTVQS*KTAVQIGRNAQ
Trigger: CTGGGCATTTCTCCCTATCTGTACTGCTGTCTTGCAGCTCTGAACGGTGCAACGTAATGGCGACAGAAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR TCA 72 bp GTTTCCAAGTTGCTCTGTATCTTCTCGTGCTGGGGCTaGATGTTCTTCAGCTGTACCTCCACTAGGAGAACA +
Preference number: 3 (lower is better)
Translates to: VSKLLCIFSCWG*MFFSCTSTRRT
Trigger: TGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGATACAGAGCAACTTGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 72 bp TCAGAGCTGCAAGACAGCAGTACAGATAGGGAGAAATaGCCAGGAGCATCTCATCATGTGGTGCATTTAGCT +
Preference number: 3 (lower is better)
Translates to: SELQDSSTDREK*PGASHHVVHLA
Trigger: AGCTAAATGCACCACATGATGAGATGCTCCTGGGCATTTCTCCCTATCTGTACTGCTGTCTTGCAGCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 72 bp GTCACTTTATCCCTTTTTGCCTTCAAGCCATTGTACTaGCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCA +
Preference number: 3 (lower is better)
Translates to: VTLSLFAFKPLY*PGKAAVLSLSS
Trigger: TGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAGTACAATGGCTTGAAGGCAAAAAGGGATAAAGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 72 bp CTCATGGAGCTCTTTGGGGACTCCCTTTTGTTAGGCTaGCTTCAAGCAAATGAGAGAATGTGGGAAAGCAAG +
Preference number: 3 (lower is better)
Translates to: LMELFGDSLLLG*LQANERMWESK
Trigger: CTTGCTTTCCCACATTCTCTCATTTGCTTGAAGGCAGCCTAACAAAAGGGAGTCCCCAAAGAGCTCCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR-3UTR CAA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCACAGGCCTCTCCCACCTaGTGTACCTCTTGGGAAAAT +
Preference number: 3 (lower is better)
Translates to: LQANERMWESKQPAHHKAQASPT*CTSWEN
Trigger: ATTTTCCCAAGAGGTACACAAGGTGGGAGAGGCCTG...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR TCA 72 bp GAAACACTGGTAAACCCACTAGTATCATGCTTACTTTaGATCTTTGTTTCTCTTCCCTGGGAGGGGGAGGGC +
Preference number: 3 (lower is better)
Translates to: ETLVNPLVSCLL*IFVSLPWEGEG
Trigger: GCCCTCCCCCTCCCAGGGAAGAGAAACAAAGATTCAAAGTAAGCATGATACTAGTGGGTTTACCAGTGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR TCA 72 bp GGTGGCTCATTCATCCAGATGTTGCTCTTGACCTTATaGATTATGACAGCACTTCCTAAGACTCCTCCGCAC +
Preference number: 3 (lower is better)
Translates to: GGSFIQMLLLTL*IMTALPKTPPH
Trigger: GTGCGGAGGAGTCTTAGGAAGTGCTGTCATAATTCATAAGGTCAAGAGCAACATCTGGATGAATGAGCCACC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR TCA 72 bp GAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTaGCCACAGGACAGATCTTTGTTCTCTTTGTCCTCA +
Preference number: 3 (lower is better)
Translates to: ENISCEDRASTV*PQDRSLFSLSS
Trigger: TGAGGACAAAGAGAACAAAGATCTGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR GCA 72 bp ACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTaGCATCAGACTCTGGGAAAAAGCAACAAGGTTTCA +
Preference number: 3 (lower is better)
Translates to: TCGGEDSLDHSH*HQTLGKSNKVS
Trigger: TGAAACCTTGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CCA 72 bp CTTTTGTTAGGCTGCCTTCAAGCAAATGAGAGAATGTaGGAAAGCAAGCAACCTGCACACCATAAAGCACCA +
Preference number: 3 (lower is better)
Translates to: LLLGCLQANERM*ESKQPAHHKAP
Trigger: TGGTGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAGGCAGCCTAACAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGGCTTGTGCATGGCACTaGCCCCCGCGGCTCGGACCC +
Preference number: 4 (lower is better)
Translates to: PASSLQYGGEGGTLASKEACAWH*PPRLGP
Trigger: GGGTCCGAGCCGCGGGGGGCAGTGCCATGCACAAGC...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTGGGGTGGCCCCCGCCTaGGAGGGCAAGGTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSGVAPA*EGKVCE
Trigger: CTCGCAGACCTTGCCCTCGCAGGCGGGGGCCACCCC...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTCTCCCCCTCCAGCACTaGCGGCTCCGTGTCGCCCGT +
Preference number: 4 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSLPLQH*RLRVAR
Trigger: ACGGGCGACACGGAGCCGCCAGTGCTGGAGGGGGAG...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTCGCCGCCGGGCTCCCTaGCACACTCACACTGCTCGG +
Preference number: 4 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSRRRAP*HTHTAR
Trigger: CCGAGCAGTGTGAGTGTGCCAGGGAGCCCGGCGGCG...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTCCGCGCTGGCGCCGTTaGCCCCACCTGGCCCGTAAG +
Preference number: 4 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLPRWRR*PHLARK
Trigger: CTTACGGGCCAGGTGGGGGCAACGGCGCCAGCGCGG...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCGCCCGTCGTGGCTTCTaGGCCGAGGCCCAGCGGCAA +
Preference number: 4 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALARRGF*AEAQRQ
Trigger: TTGCCGCTGGGCCTCGGCCCAGAAGCCACGACGGGC...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp CAACCAGGCCTGTGTCACCTACTCCATCACAAGGCCTGGCTCCTTCAGGACCTCGCCCGTCGTGGCTTCTaGGCCGAGGCCCAGCGGCAA +
Preference number: 4 (lower is better)
Translates to: QPGLCHLLHHKAWLLQDLARRGF*AEAQRQ
Trigger: TTGCCGCTGGGCCTCGGCCCAGAAGCCACGACGGGC...GAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAGTAGGTGACACAGGCCTGGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR TCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTCCCGGCCGGTGGGGATaGGCTTGGCCTTGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLPGRWG*AWPWCE
Trigger: CTCGCACCAAGGCCAAGCTCATCCCCACCGGCCGGG...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTGCTTGTGCATGGCACTaGCCCCCGCGGCTCGGACCC +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLACAWH*PPRLGP
Trigger: GGGTCCGAGCCGCGGGGGGCAGTGCCATGCACAAGC...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCCGCGCTGGCGCCGTTaGCCCCACCTGGCCCGTAAG +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHPRWRR*PHLARK
Trigger: CTTACGGGCCAGGTGGGGGCAACGGCGCCAGCGCGG...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATGGGGTGGCCCCCGCCTaGGAGGGCAAGGTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHGVAPA*EGKVCE
Trigger: CTCGCAGACCTTGCCCTCGCAGGCGGGGGCCACCCC...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTCCGTGTCGCCCGTCGTaGCTTCTGGGCCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLPCRPS*LLGRGP
Trigger: TGGGCCTCGGCCCAGAAGCCACGACGGGCGACACGG...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTCGCCGCCGGGCTCCCTaGCACACTCACACTGCTCGG +
Preference number: 4 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLRRRAP*HTHTAR
Trigger: CCGAGCAGTGTGAGTGTGCCAGGGAGCCCGGCGGCG...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTGCCGTTGCCCCCACCTaGCCCGTAAGGGTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLAVAPT*PVRVGD
Trigger: GTCCCCGACCCTTACGGGCCAGGTGGGGGCAACGGC...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTGCCGTTGCCCCCACCTaGCCCGTAAGGGTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLAVAPT*PVRVGD
Trigger: GTCCCCGACCCTTACGGGCCAGGTGGGGGCAACGGC...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCATGATGGTCTCGGGTaGAGGCTGTCGCCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: PASSLQYGGEGGTLASKEHDGLG*RLSPPH
Trigger: GTGCGGAGGCGACAGCCTCCACCCGAGACCATCATG...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGGAGAAGCTGAGCCCCTaGCTTGGCAGGCAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PASSLQYGGEGGTLASKEEKLSP*LGRQLS
Trigger: GGACAGCTGCCTGCCAAGCCAGGGGCTCAGCTTCTC...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGCCCCATAACCCGCGCTaGCGCCGTTGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGPHNPR*RRCPHL
Trigger: CAGGTGGGGGCAACGGCGCCAGCGCGGGTTATGGGG...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTGCTCTTGCCCGGGACTaGCTTAGGAGGCACCGGCCC +
Preference number: 4 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLALARD*LRRHRP
Trigger: GGGCCGGTGCCTCCTAAGCCAGTCCCGGGCAAGAGC...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTGGTACAGGTGCACTCTaGCCACCAGCTGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSGTGAL*PPAGAA
Trigger: AGCGGCCCCAGCTGGTGGCCAGAGTGCACCTGTACC...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR TCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCGGCCACAATGGTGACTaGCTGGCCGGCCCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRGHNGD*LAGPFQ
Trigger: CTGAAACGGGCCGGCCAGTCAGTCACCATTGTGGCC...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR TCA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCAACTGGGCCACAATGGTaGCTGACTGGCCGGCCCGTT +
Preference number: 4 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPATGPQW*LTGRPV
Trigger: AACGGGCCGGCCAGTCAGTCACCATTGTGGCCCAGT...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR GCA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATTCGCACCACAGGGCCTaGCTCCTTCAGCGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENSHHRA*LLQRLH
Trigger: GTGGAGGCGCTGAAGGAGGCAGGCCCTGTGGTGCGA...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGTCGCACCACAGGGCCTaGCTCCTTCAGCGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRSHHRA*LLQRLH
Trigger: GTGGAGGCGCTGAAGGAGGCAGGCCCTGTGGTGCGA...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATTCTCGGGCCCCACCCTaGAAACCTGTCCCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENSRAPP*KPVPRN
Trigger: GTTCCGGGGGACAGGTTTGCAGGGTGGGGCCCGAGA...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374355.7
CDS-3UTR CCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTGAGAAGCTGAGCCCCTaGCTTGGCAGGCAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSEKLSP*LGRQLS
Trigger: GGACAGCTGCCTGCCAAGCCAGGGGCTCAGCTTCTC...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGTCACCACCCCGAGAAGCTGAGCCCCTaGCTTGGCAGGCAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GWGGRPSTQLSQRACHHPEKLSP*LGRQLS
Trigger: GGACAGCTGCCTGCCAAGCCAGGGGCTCAGCTTCTC...GGGGTGGTGACAGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTCCGCACACAGGACTCTaGCTGCACCTCAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLPHTGL*LHLRGS
Trigger: GCTGCCCCTGAGGTGCAGCCAGAGTCCTGTGTGCGG...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTGGGGCCGCTGCCGTTaGGTTTGGGGGTGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCWGRCR*VWGCSC
Trigger: GCAAGAGCACCCCCAAACTCAACGGCAGCGGCCCCA...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR TCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCCTCCTCCTACGATGTTaGAGCCCAGGCCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALLLLRC*SPGLWS
Trigger: GCTCCACAGGCCTGGGCTTCAACATCGTAGGAGGAG...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR TCA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTTCTCCGGCCTCAGGCTaGCCCCTCCTAGCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPSPASG*PLLALK
Trigger: CTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGA...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCCCAGCTCGGCTAGCTaGTCATCACTAAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: PASSLQYGGEGGTLASKEPSSAS*SSLRRE
Trigger: CTCTCTCCTTAGTGATGATCAGCTAGCCGAGCTGGG...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCTGGTTGGTGCTATTTaGAGCAGTGTCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PASSLQYGGEGGTLASKELVGAI*SSVWGW
Trigger: CCAGCCCCAGACACTGCTTCAAATAGCACCAACCAG...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCAACACAGGACTCTGGCTaGACCTCAGGGGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPATQDSG*TSGAAA
Trigger: AGCTGCTGCCCCTGAGGTGCAGCCAGAGTCCTGTGT...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCGCCAAGCAAGCCAAGTaGTGTCCCGCCATCCCAGCA +
Preference number: 4 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRAKQAK*CPAIPA
Trigger: TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGC...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCCCGTGTCGCCCGTCGTaGCTTCTGGGCCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSPCRPS*LLGRGP
Trigger: TGGGCCTCGGCCCAGAAGCCACGACGGGCGACACGG...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGGGGTCATCAGGGACATaGGGATTGTCGATGCCACCT +
Preference number: 4 (lower is better)
Translates to: PASSLQYGGEGGTLASKEGSSGT*GLSMPP
Trigger: AGGTGGCATCGACAATCCCCATGTCCCTGATGACCC...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGACAATGGTGACTGACTaGCCGGCCCGTTTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PASSLQYGGEGGTLASKETMVTD*PARFRA
Trigger: TGCTCTGAAACGGGCCGGCCAGTCAGTCACCATTGT...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR CCA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCCCGCACACAGGACTCTaGCTGCACCTCAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCPHTGL*LHLRGS
Trigger: GCTGCCCCTGAGGTGCAGCCAGAGTCCTGTGTGCGG...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCTGTTGGGGAGGGGCTaGAGCAGAGCATATGAAGCA +
Preference number: 4 (lower is better)
Translates to: PASSLQYGGEGGTLASKELLGRG*SRAYEA
Trigger: TGCTTCATATGCTCTGCTCCAGCCCCTCCCCAACAG...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCGTCGTCCCTCCAGTATaGAGGCGAGGGAGGCACGTT +
Preference number: 4 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALVVPPV*RRGRHV
Trigger: AACGTGCCTCCCTCGCCTCCATACTGGAGGGACGAC...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTGAGCGTACATGTCGTTaGGGTGGAGGCTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLERTCR*GGGCLA
Trigger: AGCCAGGCAGCCTCCACCTCAACGACATGTACGCTC...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR TCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGGAGGAGCAGGGTAGCTaGCCTTGCTCTCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGEEQGS*PCSPQP
Trigger: GGGCTGTGGAGAGCAAGGTCAGCTACCCTGCTCCTC...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR TCA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTCTCCTCCTACGATGTTaGAGCCCAGGCCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPLLLRC*SPGLWS
Trigger: GCTCCACAGGCCTGGGCTTCAACATCGTAGGAGGAG...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR TCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCTCTCCGGCCTCAGGCTaGCCCCTCCTAGCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLSPASG*PLLALK
Trigger: CTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGA...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCAGAGGGCTATGGGGATaGCTGCTGTCCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRRGLWG*LLSCSA
Trigger: TGCAGAGCAGGACAGCAGTCATCCCCATAGCCCTCT...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTTTACAGCAGTGCTGGTaGTTGTGCATGGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSLQQCW*LCMALP
Trigger: GGGCAGTGCCATGCACAAGCACCAGCACTGCTGTAA...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGCCCGGTTGGTACAGGTaGACTCTGGCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGPGWYR*TLATSW
Trigger: CCAGCTGGTGGCCAGAGTGCACCTGTACCAACCGGG...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCTTGGGAAAGGTCCATaGAGGAATGGGCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: PASSLQYGGEGGTLASKELGKGP*RNGHSH
Trigger: GTGACTGTGCCCATTCCTGCATGGACCTTTCCCAAG...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTGCCAAGCAAGCCAAGTaGTGTCCCGCCATCCCAGCA +
Preference number: 4 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPAKQAK*CPAIPA
Trigger: TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGC...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTACTGCTGTCCTGCTCTaGAAATGGGCCCATCCCACC +
Preference number: 4 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSTAVLL*KWAHPT
Trigger: GGTGGGATGGGCCCATTTGCAGAGCAGGACAGCAGT...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCAACTGCTGTCCTGCTCTaGAAATGGGCCCATCCCACC +
Preference number: 4 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPATAVLL*KWAHPT
Trigger: GGTGGGATGGGCCCATTTGCAGAGCAGGACAGCAGT...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCCATGATGGTCTCGGGTaGAGGCTGTCGCCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCHDGLG*RLSPPH
Trigger: GTGCGGAGGCGACAGCCTCCACCCGAGACCATCATG...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCACTCACTTTCTCCGTGTaGGGTCACCAGCCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPALTFSV*GHQPCL
Trigger: CAGGCAAGGCTGGTGACCCCACACGGAGAAAGTGAG...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCCCTTCCCAACCAGCTaGGATAGAAGATGCCATCTG +
Preference number: 4 (lower is better)
Translates to: PASSLQYGGEGGTLASKEPFPTS*DRRCHL
Trigger: CAGATGGCATCTTCTATCCCAGCTGGTTGGGAAGGG...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGATCCCAGCACAGAACTaGAAGGCAAGTGACTCCCTG +
Preference number: 4 (lower is better)
Translates to: PASSLQYGGEGGTLASKEIPAQN*KASDSL
Trigger: CAGGGAGTCACTTGCCTTCCAGTTCTGTGCTGGGAT...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTGTCGTCCCTCCAGTATaGAGGCGAGGGAGGCACGTT +
Preference number: 4 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPVVPPV*RRGRHV
Trigger: AACGTGCCTCCCTCGCCTCCATACTGGAGGGACGAC...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTCCGCACAAGTTGCAATaGCACCTGCCACGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSPHKLQ*HLPRQN
Trigger: GTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGG...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTAAAGCGACTGTATTCTaGCGCCGGGTCGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSKATVF*RRVGVQ
Trigger: CTGGACTCCGACCCGGCGCCAGAATACAGTCGCTTT...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542398.1
CDS-3UTR TCA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCCTCCTCCTACGATGTTaGAGCCCAGGCCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCLLLRC*SPGLWS
Trigger: GCTCCACAGGCCTGGGCTTCAACATCGTAGGAGGAG...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR TCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTTGCAACTGCCCGCACTaGCTGGATGCTGGTCCCATA +
Preference number: 4 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLCNCPH*LDAGPI
Trigger: TATGGGACCAGCATCCAGTCAGTGCGGGCAGTTGCA...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTTGCTTTCCCTTCTGCTaGCAGGACAACCAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSCFPFC*QDNQAC
Trigger: ACAGGCCTGGTTGTCCTGTCAGCAGAAGGGAAAGCA...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp GGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGTCACCACCCCGCCAGCCCCACCGGCTaGACTGCTTTCTTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: GWGGRPSTQLSQRACHHPASPTG*TAFFSN
Trigger: ATTAGAGAAGAAAGCAGTTCAGCCGGTGGGGCTGGC...GGGGTGGTGACAGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374355.7
CDS-3UTR GCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGACACAGGACTCTGGCTaGACCTCAGGGGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGTQDSG*TSGAAA
Trigger: AGCTGCTGCCCCTGAGGTGCAGCCAGAGTCCTGTGT...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAACCAGGCCTGTGTCACCTACTCCATCACAAGGCCTGGCTCCTTCAGGACCTCTTCTCTGTTCTCCCCTaGGTCGTCCCTCCAGTATGG +
Preference number: 4 (lower is better)
Translates to: QPGLCHLLHHKAWLLQDLFSVLP*VVPPVW
Trigger: CCATACTGGAGGGACGACGCAGGGGAGAACAGAGAA...GAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAGTAGGTGACACAGGCCTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTCAACATTGCCTCGCTTaGACCAGCCCTAACCCAGCG +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLQHCLA*TSPNPA
Trigger: CGCTGGGTTAGGGCTGGTGCAAGCGAGGCAATGTTG...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGCAACATTGCCTCGCTTaGACCAGCCCTAACCCAGCG +
Preference number: 4 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRQHCLA*TSPNPA
Trigger: CGCTGGGTTAGGGCTGGTGCAAGCGAGGCAATGTTG...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCGAGAATCAACCTCCCTaGTCACCCCTCCTCACCAGA +
Preference number: 4 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALENQPP*SPLLTR
Trigger: TCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTC...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTGGATGTTCTTCCCACTaGTTTGCCCACGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPGCSSH*FAHALP
Trigger: AGGGAGGGCGTGGGCAAAGCAGTGGGAAGAACATCC...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTACTGCTGTCCTGCTCTaGAAATGGGCCCATCCCACC +
Preference number: 4 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLTAVLL*KWAHPT
Trigger: GGTGGGATGGGCCCATTTGCAGAGCAGGACAGCAGT...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCCTGTTCCTGTATGCTaGTCTCCTGGGCCATGTTTT +
Preference number: 4 (lower is better)
Translates to: PASSLQYGGEGGTLASKEPVPVC*SPGPCF
Trigger: AAAACATGGCCCAGGAGAGCAGCATACAGGAACAGG...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374355.7
ENST00000542398.1
CDS-3UTR CCA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCGGTACAGGTGCACTCTaGCCACCAGCTGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVGTGAL*PPAGAA
Trigger: AGCGGCCCCAGCTGGTGGCCAGAGTGCACCTGTACC...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCGAGGTGGAGGCTGCCTaGCTTGGCCACCTTCAAATA +
Preference number: 4 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALEVEAA*LGHLQI
Trigger: TATTTGAAGGTGGCCAAGCCAGGCAGCCTCCACCTC...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCCCAGGCTGGAATTATaGCTTATGTGGTTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PASSLQYGGEGGTLASKEPRLEL*LMWLSA
Trigger: GGCTGACAACCACATAAGCCATAATTCCAGCCTGGG...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTGAGAAGCTGAGCCCCTaGCTTGGCAGGCAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTEKLSP*LGRQLS
Trigger: GGACAGCTGCCTGCCAAGCCAGGGGCTCAGCTTCTC...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTCTCACTTTCTCCGTGTaGGGTCACCAGCCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLLTFSV*GHQPCL
Trigger: CAGGCAAGGCTGGTGACCCCACACGGAGAAAGTGAG...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTCTCACTTTCTCCGTGTaGGGTCACCAGCCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLLTFSV*GHQPCL
Trigger: CAGGCAAGGCTGGTGACCCCACACGGAGAAAGTGAG...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGTGCTTTCGCTGTCACTaGTGTTGGATGTCACTCCCT +
Preference number: 4 (lower is better)
Translates to: PASSLQYGGEGGTLASKECFRCH*CWMSLP
Trigger: AGGGAGTGACATCCAACACCAGTGACAGCGAAAGCA...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000542398.1
CDS-3UTR CCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCGACTCGGTCCTTCATTaGGCCCAGGATGATCACAGG +
Preference number: 4 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALDSVLH*AQDDHR
Trigger: CCTGTGATCATCCTGGGCCCAATGAAGGACCGAGTC...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCCCGCACACAGGACTCTaGCTGCACCTCAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSPHTGL*LHLRGS
Trigger: GCTGCCCCTGAGGTGCAGCCAGAGTCCTGTGTGCGG...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTCTCCATCACAAGGCCTaGCTCCTTCAGGACCTCATA +
Preference number: 4 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSLHHKA*LLQDLI
Trigger: TATGAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAG...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCACTGTTGGGGAGGGGCTaGAGCAGAGCATATGAAGCA +
Preference number: 4 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPALLGRG*SRAYEA
Trigger: TGCTTCATATGCTCTGCTCCAGCCCCTCCCCAACAG...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATGCGAGGGAGGCACGTTaGCTTCAAAGGAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENAREAR*LQRSTV
Trigger: CACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGC...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTTGTCTGGGGCTGGGGTaGAAGACCAAGCACACAACT +
Preference number: 4 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSCLGLG*KTKHTT
Trigger: AGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACA...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTAGCAGTGTCTGGGGCTaGGGTGGAAGACCAAGCACA +
Preference number: 4 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPSSVWG*GGRPST
Trigger: TGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGCT...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAACCAGGCCTGTGTCACCTACTCCATCACAAGGCCTGGCTCCTTCAGGACCTCCCGCACAAGTTGCAATaGCACCTGCCACGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: QPGLCHLLHHKAWLLQDLPHKLQ*HLPRQN
Trigger: GTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGG...GAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAGTAGGTGACACAGGCCTGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CAA 72 bp GCACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTaGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: AQNWKASDSLSL*VEPRKEPQQSP
Trigger: AGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACACCCGGCCGGTGGGGATaGGCTTGGCCTTGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: VKIPLITVTAIRLWEKATPGRWG*AWPWCE
Trigger: CTCGCACCAAGGCCAAGCTCATCCCCACCGGCCGGG...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR TCA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGTGGGGCCGCTGCCGTTaGGTTTGGGGGTGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: NNGSDGFCTCASAWERSMWGRCR*VWGCSC
Trigger: GCAAGAGCACCCCCAAACTCAACGGCAGCGGCCCCA...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR TCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTAGCCTTTGTGCAGGATaGTCTTGCGAGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLSLCAG*SCEALW
Trigger: CCAGAGAGCCTCGCAAGATCATCCTGCACAAAGGCT...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR TCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTAGCCTTTGTGCAGGATaGTCTTGCGAGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLSLCAG*SCEALW
Trigger: CCAGAGAGCCTCGCAAGATCATCCTGCACAAAGGCT...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR TCA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCACTGGGCCACAATGGTaGCTGACTGGCCGGCCCGTT +
Preference number: 4 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVTGPQW*LTGRPV
Trigger: AACGGGCCGGCCAGTCAGTCACCATTGTGGCCCAGT...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR TCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCACTGGGCCACAATGGTaGCTGACTGGCCGGCCCGTT +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSTGPQW*LTGRPV
Trigger: AACGGGCCGGCCAGTCAGTCACCATTGTGGCCCAGT...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR TCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTTCATTGGGCCCAGGATaGTCACAGGCCTTGCATAGT +
Preference number: 4 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSSLGPG*SQALHS
Trigger: ACTATGCAAGGCCTGTGATCATCCTGGGCCCAATGA...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATTGCAACTGCCCGCACTaGCTGGATGCTGGTCCCATA +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHCNCPH*LDAGPI
Trigger: TATGGGACCAGCATCCAGTCAGTGCGGGCAGTTGCA...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTCTGGTTGGTGCTATTTaGAGCAGTGTCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLLVGAI*SSVWGW
Trigger: CCAGCCCCAGACACTGCTTCAAATAGCACCAACCAG...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATAGAGGGCTATGGGGATaGCTGCTGTCCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHRGLWG*LLSCSA
Trigger: TGCAGAGCAGGACAGCAGTCATCCCCATAGCCCTCT...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CAACCAGGCCTGTGTCACCTACTCCATCACAAGGCCTGGCTCCTTCAGGACCTCTTCTCGTGCTGGGGCTaGATGTTCTTCAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: QPGLCHLLHHKAWLLQDLFSCWG*MFFSCT
Trigger: GGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAA...GAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAGTAGGTGACACAGGCCTGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTGGGCACTTACAGCAGTaGTGGTGCTTGTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLGHLQQ*WCLCMA
Trigger: TGCCATGCACAAGCACCAGCACTGCTGTAAGTGCCC...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCCCCGGTTGGTACAGGTaGACTCTGGCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSPGWYR*TLATSW
Trigger: CCAGCTGGTGGCCAGAGTGCACCTGTACCAACCGGG...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp GGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGTCACCACCCCCCCATCCATGGCAGCTaGTCCACCAGGGATAATCTT +
Preference number: 4 (lower is better)
Translates to: GWGGRPSTQLSQRACHHPPIHGS*STRDNL
Trigger: AAGATTATCCCTGGTGGAGCAGCTGCCATGGATGGG...GGGGTGGTGACAGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGCCTGTGGAGCCTTTGTaGAGGATGATCTTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRPVEPL*RMILRG
Trigger: GCCTCGCAAGATCATCCTGCACAAAGGCTCCACAGG...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR GCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTCCTGTGGAGCCTTTGTaGAGGATGATCTTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLPVEPL*RMILRG
Trigger: GCCTCGCAAGATCATCCTGCACAAAGGCTCCACAGG...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR GCA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATGGGATCACACCGATCTaGTCACTTTCTCCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENGITPI*SLSPCG
Trigger: CCCACACGGAGAAAGTGAGCAGATCGGTGTGATCCC...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTGGCTCTGATGGATTTTaGACCTGTGCTAGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSGSDGF*TCASAW
Trigger: CCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCC...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCGGCTCTGATGGATTTTaGACCTGTGCTAGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRGSDGF*TCASAW
Trigger: CCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCC...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCTCACTTCACAAGCCGTaGAGCTGTCCAGAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRSLHKP*SCPESV
Trigger: GACAGACTCTGGACAGCTGCACGGCTTGTGAAGTGA...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCCTGTCGCCATTACGTTaGACCGTTCAGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALLSPLR*TVQSCK
Trigger: CTTGCAGCTCTGAACGGTGCAACGTAATGGCGACAG...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGTCACCACCCCCTGTCGCCATTACGTTaGACCGTTCAGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GWGGRPSTQLSQRACHHPLSPLR*TVQSCK
Trigger: CTTGCAGCTCTGAACGGTGCAACGTAATGGCGACAG...GGGGTGGTGACAGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTCTCAGGGGCAGCAGCTaGTTTCAGGTCAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLLRGSS*FQVKSL
Trigger: GAGAGACTTGACCTGAAAGCAGCTGCTGCCCCTGAG...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTGCCAAGCAAGCCAAGTaGTGTCCCGCCATCCCAGCA +
Preference number: 4 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTAKQAK*CPAIPA
Trigger: TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGC...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAACCAGGCCTGTGTCACCTACTCCATCACAAGGCCTGGCTCCTTCAGGACCTCGGGCTAGGAAACAAGTaGCTCAATCCTAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QPGLCHLLHHKAWLLQDLGLGNK*LNPRAK
Trigger: CTTGGCCCTAGGATTGAGGCACTTGTTTCCTAGCCC...GAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAGTAGGTGACACAGGCCTGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCCAACATTGCCTCGCTTaGACCAGCCCTAACCCAGCG +
Preference number: 4 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLQHCLA*TSPNPA
Trigger: CGCTGGGTTAGGGCTGGTGCAAGCGAGGCAATGTTG...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCAAAGCATCCTCAACATTaGCTCGCTTGCACCAGCCCT +
Preference number: 4 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPAKHPQH*LACTSP
Trigger: AGGGCTGGTGCAAGCGAGGCAATGTTGAGGATGCTT...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTGAGAATCAACCTCCCTaGTCACCCCTCCTCACCAGA +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLENQPP*SPLLTR
Trigger: TCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTC...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGACTGCCAGAACTGCCTaGTCTAAGCATCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRTARTA*SKHPSP
Trigger: AGGGGAGGGATGCTTAGAGCAGGCAGTTCTGGCAGT...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTACTGCCAGAACTGCCTaGTCTAAGCATCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPTARTA*SKHPSP
Trigger: AGGGGAGGGATGCTTAGAGCAGGCAGTTCTGGCAGT...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAACCAGGCCTGTGTCACCTACTCCATCACAAGGCCTGGCTCCTTCAGGACCTCAGTTGCAATGGCACCTaGCACGTCAGAACTGCCAGA +
Preference number: 4 (lower is better)
Translates to: QPGLCHLLHHKAWLLQDLSCNGT*HVRTAR
Trigger: TCTGGCAGTTCTGACGTGGCAGGTGCCATTGCAACT...GAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAGTAGGTGACACAGGCCTGGTTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCAGTTGCAATGGCACCTaGCACGTCAGAACTGCCAGA +
Preference number: 4 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRSCNGT*HVRTAR
Trigger: TCTGGCAGTTCTGACGTGGCAGGTGCCATTGCAACT...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCTCCTCCGCACAAGTTaGAATGGCACCTGCCACGTC +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHLLRTS*NGTCHV
Trigger: GACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAG...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGGGCAGGAAACTCCGCTaGCCTCGCCTCCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKGRKLR*PRLLSP
Trigger: GGGGCTGAGGAGGCGAGGGCAGCGGAGTTTCCTGCC...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374355.7
CDS-3UTR GCA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGTTCCGGCTCCACTGCTaGCTGCCCGCCAGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKFRLHC*LPASLS
Trigger: CGAGAGGCTGGCGGGCAGGCAGCAGTGGAGCCGGAA...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374355.7
CDS-3UTR GCA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTGTGAGGACCGCTTCTaGTCTGGTCCCCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCCEDRF*SGPQDG
Trigger: TCCATCCTGGGGACCAGAGCAGAAGCGGTCCTCACA...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374360.8
CDS-3UTR CCA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATGGAGGCTGCCTGGCTTaGCCACCTTCAAATACACCA +
Preference number: 4 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENGGCLA*PPSNTP
Trigger: TGGTGTATTTGAAGGTGGCCAAGCCAGGCAGCCTCC...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGGAGGCTGCCTGGCTTaGCCACCTTCAAATACACCA +
Preference number: 4 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPGGCLA*PPSNTP
Trigger: TGGTGTATTTGAAGGTGGCCAAGCCAGGCAGCCTCC...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp CAACCAGGCCTGTGTCACCTACTCCATCACAAGGCCTGGCTCCTTCAGGACCTCCCACCCTCTTCTTACTaGGGATCACACCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: QPGLCHLLHHKAWLLQDLPPSSY*GSHRSA
Trigger: AGCAGATCGGTGTGATCCCCAGTAAGAAGAGGGTGG...GAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAGTAGGTGACACAGGCCTGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCCCACCCTCTTCTTACTaGGGATCACACCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALPPSSY*GSHRSA
Trigger: AGCAGATCGGTGTGATCCCCAGTAAGAAGAGGGTGG...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTGACTCGGTCCTTCATTaGGCCCAGGATGATCACAGG +
Preference number: 4 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLDSVLH*AQDDHR
Trigger: CCTGTGATCATCCTGGGCCCAATGAAGGACCGAGTC...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCGCGAGGGAGGCACGTTaGCTTCAAAGGAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCAREAR*LQRSTV
Trigger: CACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGC...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCAGCAGTGTCTGGGGCTaGGGTGGAAGACCAAGCACA +
Preference number: 4 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCSSVWG*GGRPST
Trigger: TGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGCT...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCATTGCCACCACAGATGTaGACTCCCATCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPALPPQM*TPIWLV
Trigger: CACCAACCAGATGGGAGTCCACATCTGTGGTGGCAA...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTTTGCCACCACAGATGTaGACTCCCATCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSLPPQM*TPIWLV
Trigger: CACCAACCAGATGGGAGTCCACATCTGTGGTGGCAA...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCTTGCCACCACAGATGTaGACTCCCATCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRLPPQM*TPIWLV
Trigger: CACCAACCAGATGGGAGTCCACATCTGTGGTGGCAA...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATCCGCACAAGTTGCAATaGCACCTGCCACGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENPHKLQ*HLPRQN
Trigger: GTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGG...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTGGGTGTGTCTCCCTTTaGGGTTTCCAAGTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSGCVSL*GFQVAL
Trigger: CAGAGCAACTTGGAAACCCCAAAGGGAGACACACCC...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCGGGTGTGTCTCCCTTTaGGGTTTCCAAGTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALGCVSL*GFQVAL
Trigger: CAGAGCAACTTGGAAACCCCAAAGGGAGACACACCC...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGTCTTGCGAGGCTCTCTaGCATCCCCTCCGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: NNGSDGFCTCASAWERSMSCEAL*HPLRAA
Trigger: TGCGGCCCGGAGGGGATGCCAGAGAGCCTCGCAAGA...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374355.7
CDS-3UTR TCA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTAGATGTGTTCTTCAGTaGGGCCACAGCTTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPRCVLQ*GHSFLV
Trigger: CACGAGGAAGCTGTGGCCTCACTGAAGAACACATCT...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR TCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACAGAGGAGCAGGGTAGCTaGCCTTGCTCTCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTEEQGS*PCSPQP
Trigger: GGGCTGTGGAGAGCAAGGTCAGCTACCCTGCTCCTC...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR TCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCTGCGAGGCTCTCTGGTaGAGTCCTCCTCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSCEALW*SPPQPA
Trigger: TGCTGGCTGAGGAGGACTTCACCAGAGAGCCTCGCA...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR TCA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGGGCCTCCTGCCAGGATaGAGGAGACAAAAATGCCTT +
Preference number: 4 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRGLLPG*RRQKCL
Trigger: AAGGCATTTTTGTCTCCTTCATCCTGGCAGGAGGCC...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR TCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTGGCCTCCTGCCAGGATaGAGGAGACAAAAATGCCTT +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLGLLPG*RRQKCL
Trigger: AAGGCATTTTTGTCTCCTTCATCCTGGCAGGAGGCC...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR TCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTGGCCTCCTGCCAGGATaGAGGAGACAAAAATGCCTT +
Preference number: 4 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLGLLPG*RRQKCL
Trigger: AAGGCATTTTTGTCTCCTTCATCCTGGCAGGAGGCC...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR TCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTGCTGCAGCCTGCTCATaGGTTGCATTCCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLAAACS*VAFLRF
Trigger: GAATCTGAGGAATGCAACTCATGAGCAGGCTGCAGC...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR TCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATGGCCACAATGGTGACTaGCTGGCCGGCCCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHGHNGD*LAGPFQ
Trigger: CTGAAACGGGCCGGCCAGTCAGTCACCATTGTGGCC...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR TCA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGGGCCACAATGGTGACTaGCTGGCCGGCCCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: NNGSDGFCTCASAWERSMGHNGD*LAGPFQ
Trigger: CTGAAACGGGCCGGCCAGTCAGTCACCATTGTGGCC...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR TCA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTTCATTGGGCCCAGGATaGTCACAGGCCTTGCATAGT +
Preference number: 4 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPSLGPG*SQALHS
Trigger: ACTATGCAAGGCCTGTGATCATCCTGGGCCCAATGA...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTTCATTGGGCCCAGGATaGTCACAGGCCTTGCATAGT +
Preference number: 4 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLSLGPG*SQALHS
Trigger: ACTATGCAAGGCCTGTGATCATCCTGGGCCCAATGA...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACATCTCCGGCCTCAGGCTaGCCCCTCCTAGCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTSPASG*PLLALK
Trigger: CTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGA...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CAACCAGGCCTGTGTCACCTACTCCATCACAAGGCCTGGCTCCTTCAGGACCTCACCAAATCAAACTCATaGCGCAGCTGGCCAAGCAAG +
Preference number: 4 (lower is better)
Translates to: QPGLCHLLHHKAWLLQDLTKSNS*RSWPSK
Trigger: CTTGCTTGGCCAGCTGCGTCATGAGTTTGATTTGGT...GAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAGTAGGTGACACAGGCCTGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCCCCAGCTCGGCTAGCTaGTCATCACTAAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLPSSAS*SSLRRE
Trigger: CTCTCTCCTTAGTGATGATCAGCTAGCCGAGCTGGG...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCAGAGCCTCAACAGTGTaGCCACAGGACAGATCTTTG +
Preference number: 4 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALRASTV*PQDRSL
Trigger: CAAAGATCTGTCCTGTGGTCACACTGTTGAGGCTCT...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTTTCTCGTGCTGGGGCTaGATGTTCTTCAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPFSCWG*MFFSCT
Trigger: GGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAA...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCCCTGTGGAGCCTTTGTaGAGGATGATCTTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLPVEPL*RMILRG
Trigger: GCCTCGCAAGATCATCCTGCACAAAGGCTCCACAGG...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR GCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCCGTTTCAGAGCAGCTaGAGCCTGCTCATGAGTTGC +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHPFQSS*SLLMSC
Trigger: GCAACTCATGAGCAGGCTGCAGCTGCTCTGAAACGG...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR GCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCGGGATCACACCGATCTaGTCACTTTCTCCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLGITPI*SLSPCG
Trigger: CCCACACGGAGAAAGTGAGCAGATCGGTGTGATCCC...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGGATGATCACAGGCCTTaGATAGTGAATTTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: PASSLQYGGEGGTLASKEDDHRP*IVNFLP
Trigger: CGGCAAGAAATTCACTATGCAAGGCCTGTGATCATC...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTACATCTAAGATGCAGTaGTTGCCCCTCTCTGCAACT +
Preference number: 4 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSTSKMQ*LPLSAT
Trigger: AGTTGCAGAGAGGGGCAAGCACTGCATCTTAGATGT...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGTCACCACCCCCGGAAACATCTAAGATaGAGTGCTTGCCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GWGGRPSTQLSQRACHHPRKHLR*SACPSL
Trigger: CAGAGAGGGGCAAGCACTGCATCTTAGATGTTTCCG...GGGGTGGTGACAGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTCTTGGGAAAGGTCCATaGAGGAATGGGCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLLGKGP*RNGHSH
Trigger: GTGACTGTGCCCATTCCTGCATGGACCTTTCCCAAG...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTGGCTCTGATGGATTTTaGACCTGTGCTAGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLGSDGF*TCASAW
Trigger: CCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCC...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTTCACTTCACAAGCCGTaGAGCTGTCCAGAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLSLHKP*SCPESV
Trigger: GACAGACTCTGGACAGCTGCACGGCTTGTGAAGTGA...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTTGCACCGTTCAGAGCTaGAAGACAGCAGTACAGATA +
Preference number: 4 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSCTVQS*KTAVQI
Trigger: TATCTGTACTGCTGTCTTGCAGCTCTGAACGGTGCA...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGACCACACCTGCTGCCTaGACTTGTGGCGGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGTTPAA*TCGGED
Trigger: ATCTTCACCGCCACAAGTGCAGGCAGCAGGTGTGGT...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTGGGCTAGGAAACAAGTaGCTCAATCCTAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLGLGNK*LNPRAK
Trigger: CTTGGCCCTAGGATTGAGGCACTTGTTTCCTAGCCC...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTAAGCATCCTCAACATTaGCTCGCTTGCACCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLKHPQH*LACTSP
Trigger: AGGGCTGGTGCAAGCGAGGCAATGTTGAGGATGCTT...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATAAGCATCCTCAACATTaGCTCGCTTGCACCAGCCCT +
Preference number: 4 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENKHPQH*LACTSP
Trigger: AGGGCTGGTGCAAGCGAGGCAATGTTGAGGATGCTT...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCACTGCCAGAACTGCCTaGTCTAAGCATCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCTARTA*SKHPSP
Trigger: AGGGGAGGGATGCTTAGAGCAGGCAGTTCTGGCAGT...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCTCCCTGTTCCTGTATaGTGCTCTCCTGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHLPVPV*CSPGPC
Trigger: ACATGGCCCAGGAGAGCAGCATACAGGAACAGGGAG...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374355.7
ENST00000542398.1
CDS-3UTR GCA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTTCACTGCCATTCACCTaGTCATACCAGTCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPSLPFT*SYQSRL
Trigger: CAACCGGGACTGGTATGAGCAGGTGAATGGCAGTGA...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374360.8
CDS-3UTR CCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCACCCCATAACCCGCGCTaGCGCCGTTGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: LQANERMWESKQPAHHKAPHNPR*RRCPHL
Trigger: CAGGTGGGGGCAACGGCGCCAGCGCGGGTTATGGGG...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCATCACATCCTGCAGATTaGTGTTGTTCACCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPASHPAD*CCSPPA
Trigger: TGCTGGCGGTGAACAACACCAATCTGCAGGATGTGA...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATACAATGGTGACTGACTaGCCGGCCCGTTTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHTMVTD*PARFRA
Trigger: TGCTCTGAAACGGGCCGGCCAGTCAGTCACCATTGT...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR CCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTTGCTTTCGCTGTCACTaGTGTTGGATGTCACTCCCT +
Preference number: 4 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSCFRCH*CWMSLP
Trigger: AGGGAGTGACATCCAACACCAGTGACAGCGAAAGCA...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000542398.1
CDS-3UTR CCA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCGACTCGGTCCTTCATTaGGCCCAGGATGATCACAGG +
Preference number: 4 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCDSVLH*AQDDHR
Trigger: CCTGTGATCATCCTGGGCCCAATGAAGGACCGAGTC...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGCTCCATCACAAGGCCTaGCTCCTTCAGGACCTCATA +
Preference number: 4 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRLHHKA*LLQDLI
Trigger: TATGAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAG...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTATCCCAGCACAGAACTaGAAGGCAAGTGACTCCCTG +
Preference number: 4 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPIPAQN*KASDSL
Trigger: CAGGGAGTCACTTGCCTTCCAGTTCTGTGCTGGGAT...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTATCCCAGCACAGAACTaGAAGGCAAGTGACTCCCTG +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLIPAQN*KASDSL
Trigger: CAGGGAGTCACTTGCCTTCCAGTTCTGTGCTGGGAT...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCCTGTTGGGGAGGGGCTaGAGCAGAGCATATGAAGCA +
Preference number: 4 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLLLGRG*SRAYEA
Trigger: TGCTTCATATGCTCTGCTCCAGCCCCTCCCCAACAG...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCTGGCCCCCAAAAGTTTaGGATGTTCTTCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRWPPKV*DVLPTA
Trigger: AGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCA...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTTGGCCCCCAAAAGTTTaGGATGTTCTTCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSWPPKV*DVLPTA
Trigger: AGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCA...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTTTGCCACCACAGATGTaGACTCCCATCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLLPPQM*TPIWLV
Trigger: CACCAACCAGATGGGAGTCCACATCTGTGGTGGCAA...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGGAAACACTGGTAGCTaGCAGGTCACTTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPGNTGS*QVTFSG
Trigger: GCCAGAGAAAGTGACCTGCCAGCTACCAGTGTTTCC...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGGCAAATGAGAGAATGTaGGAAAGCAAGCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: PASSLQYGGEGGTLASKEANERM*ESKQPA
Trigger: TGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGC...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTTGTATGCTGCTCTCCTaGGCCATGTTTTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSCMLLS*AMFSLL
Trigger: GAGCAAAGAAAACATGGCCCAGGAGAGCAGCATACA...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374355.7
ENST00000542398.1
CDS-3UTR CCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTCGCTGTCACTGGTGTTaGATGTCACTCCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLRCHWC*MSLPVP
Trigger: AGGAACAGGGAGTGACATCCAACACCAGTGACAGCG...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374355.7
ENST00000542398.1
CDS-3UTR TCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATGCTGCAGCCTGCTCATaGGTTGCATTCCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHAAACS*VAFLRF
Trigger: GAATCTGAGGAATGCAACTCATGAGCAGGCTGCAGC...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR TCA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGTCTCCGGCCTCAGGCTaGCCCCTCCTAGCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKSPASG*PLLALK
Trigger: CTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGA...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTTGCTTTCCCTTCTGCTaGCAGGACAACCAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTCFPFC*QDNQAC
Trigger: ACAGGCCTGGTTGTCCTGTCAGCAGAAGGGAAAGCA...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTACCAAATCAAACTCATaGCGCAGCTGGCCAAGCAAG +
Preference number: 4 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPTKSNS*RSWPSK
Trigger: CTTGCTTGGCCAGCTGCGTCATGAGTTTGATTTGGT...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTGGAGAACATCAGCTGTaGAGACAGAGCCTCAACAGT +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLGEHQL*RQSLNS
Trigger: ACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCC...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTGGAGAACATCAGCTGTaGAGACAGAGCCTCAACAGT +
Preference number: 4 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLGEHQL*RQSLNS
Trigger: ACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCC...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATGGAGAACATCAGCTGTaGAGACAGAGCCTCAACAGT +
Preference number: 4 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENGEHQL*RQSLNS
Trigger: ACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCC...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGTTCTCGTGCTGGGGCTaGATGTTCTTCAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGFSCWG*MFFSCT
Trigger: GGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAA...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCCCATCCATGGCAGCTaGTCCACCAGGGATAATCTT +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHPIHGS*STRDNL
Trigger: AAGATTATCCCTGGTGGAGCAGCTGCCATGGATGGG...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCTTGTCTCCTGGGATGTaGTGGTTGCCAATACCCCCA +
Preference number: 4 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLLSPGM*WLPIPP
Trigger: TGGGGGTATTGGCAACCAGCACATCCCAGGAGACAA...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGTCGTGCCTCACATCCTaGAGATTGGTGTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRSCLTS*RLVLFT
Trigger: GGTGAACAACACCAATCTGCAGGATGTGAGGCACGA...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTCGGAAACATCTAAGATaGAGTGCTTGCCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLRKHLR*SACPSL
Trigger: CAGAGAGGGGCAAGCACTGCATCTTAGATGTTTCCG...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCCTTGGGAAAGGTCCATaGAGGAATGGGCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLLGKGP*RNGHSH
Trigger: GTGACTGTGCCCATTCCTGCATGGACCTTTCCCAAG...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGGGCTCTGATGGATTTTaGACCTGTGCTAGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGGSDGF*TCASAW
Trigger: CCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCC...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGTCACTTCACAAGCCGTaGAGCTGTCCAGAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGSLHKP*SCPESV
Trigger: GACAGACTCTGGACAGCTGCACGGCTTGTGAAGTGA...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTACAGATAGGGAGAAATaGCCAGGAGCATCTCATCAT +
Preference number: 4 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSTDREK*PGASHH
Trigger: ATGATGAGATGCTCCTGGGCATTTCTCCCTATCTGT...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCATGCACCGTTCAGAGCTaGAAGACAGCAGTACAGATA +
Preference number: 4 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPACTVQS*KTAVQI
Trigger: TATCTGTACTGCTGTCTTGCAGCTCTGAACGGTGCA...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTTTCTCTGTTCTCCCCTaGGTCGTCCCTCCAGTATGG +
Preference number: 4 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTFSVLP*VVPPVW
Trigger: CCATACTGGAGGGACGACGCAGGGGAGAACAGAGAA...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCCAACATTGCCTCGCTTaGACCAGCCCTAACCCAGCG +
Preference number: 4 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVQHCLA*TSPNPA
Trigger: CGCTGGGTTAGGGCTGGTGCAAGCGAGGCAATGTTG...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTCTCCCATCTGGTTGGTaGTATTTGAAGCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSLPSGW*YLKQCL
Trigger: CAGACACTGCTTCAAATAGCACCAACCAGATGGGAG...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCACTGCTGTCCTGCTCTaGAAATGGGCCCATCCCACC +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSTAVLL*KWAHPT
Trigger: GGTGGGATGGGCCCATTTGCAGAGCAGGACAGCAGT...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATAGTTGCAATGGCACCTaGCACGTCAGAACTGCCAGA +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHSCNGT*HVRTAR
Trigger: TCTGGCAGTTCTGACGTGGCAGGTGCCATTGCAACT...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTCAAGGCATGATCAGCTaGAATGTCAGCAACAAAACC +
Preference number: 4 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSQGMIS*NVSNKT
Trigger: GGTTTTGTTGCTGACATTGCAGCTGATCATGCCTTG...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCTGCAGCAGAGCGGGCTaGAACTATCTCAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVCSRAG*NYLRAG
Trigger: TCCTGCCCTGAGATAGTTGCAGCCCGCTCTGCTGCA...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374355.7
CDS-3UTR CCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGCACTTACAGCAGTGCTaGTGCTTGTGCATGGCACTG +
Preference number: 4 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGHLQQC*CLCMAL
Trigger: CAGTGCCATGCACAAGCACCAGCACTGCTGTAAGTG...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCAGCTCTTGCCCGGGACTaGCTTAGGAGGCACCGGCCC +
Preference number: 4 (lower is better)
Translates to: LQANERMWESKQPAHHKAALARD*LRRHRP
Trigger: GGGCCGGTGCCTCCTAAGCCAGTCCCGGGCAAGAGC...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATCCCAGGCTGGAATTATaGCTTATGTGGTTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENPRLEL*LMWLSA
Trigger: GGCTGACAACCACATAAGCCATAATTCCAGCCTGGG...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTTGCTTTCGCTGTCACTaGTGTTGGATGTCACTCCCT +
Preference number: 4 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLCFRCH*CWMSLP
Trigger: AGGGAGTGACATCCAACACCAGTGACAGCGAAAGCA...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000542398.1
CDS-3UTR CCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTGAGTTTTTCAGGGGATaGGACCCAAATGTAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLEFFRG*DPNVVP
Trigger: GGGCACTACATTTGGGTCCCATCCCCTGAAAAACTC...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTGAGTTTTTCAGGGGATaGGACCCAAATGTAGTGCCC +
Preference number: 4 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLEFFRG*DPNVVP
Trigger: GGGCACTACATTTGGGTCCCATCCCCTGAAAAACTC...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCCCCTTCCCAACCAGCTaGGATAGAAGATGCCATCTG +
Preference number: 4 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLPFPTS*DRRCHL
Trigger: CAGATGGCATCTTCTATCCCAGCTGGTTGGGAAGGG...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATGTCGTCCCTCCAGTATaGAGGCGAGGGAGGCACGTT +
Preference number: 4 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHVVPPV*RRGRHV
Trigger: AACGTGCCTCCCTCGCCTCCATACTGGAGGGACGAC...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGTCACCACCCCGCAGGTCACTTTCTCTaGCCATTTTTCTCACCCAGT +
Preference number: 4 (lower is better)
Translates to: GWGGRPSTQLSQRACHHPAGHFL*PFFSPS
Trigger: ACTGGGTGAGAAAAATGGCCAGAGAAAGTGACCTGC...GGGGTGGTGACAGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGGGAAACACTGGTAGCTaGCAGGTCACTTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGGNTGS*QVTFSG
Trigger: GCCAGAGAAAGTGACCTGCCAGCTACCAGTGTTTCC...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCTTTCTTAAGCTCTCATaGAGCTCTTTGGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRFLKLS*SSLGTP
Trigger: GGGAGTCCCCAAAGAGCTCCATGAGAGCTTAAGAAA...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCGGGTGTGTCTCCCTTTaGGGTTTCCAAGTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLGCVSL*GFQVAL
Trigger: CAGAGCAACTTGGAAACCCCAAAGGGAGACACACCC...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTAGAGCGTACATGTCGTTaGGGTGGAGGCTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLERTCR*GGGCLA
Trigger: AGCCAGGCAGCCTCCACCTCAACGACATGTACGCTC...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR TCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATGCGAGGCTCTCTGGTaGAGTCCTCCTCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLCEALW*SPPQPA
Trigger: TGCTGGCTGAGGAGGACTTCACCAGAGAGCCTCGCA...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR TCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCAGATCAGGTCATCATTaGCTCGGTCCTTCATTGGGC +
Preference number: 4 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLRSGHH*LGPSLG
Trigger: GCCCAATGAAGGACCGAGTCAATGATGACCTGATCT...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCAGATCAGGTCATCATTaGCTCGGTCCTTCATTGGGC +
Preference number: 4 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCRSGHH*LGPSLG
Trigger: GCCCAATGAAGGACCGAGTCAATGATGACCTGATCT...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTATTGGCCCGCCTCGATaGACTTGTTGTCCTGAATAT +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLIGPPR*TCCPEY
Trigger: ATATTCAGGACAACAAGTTCATCGAGGCGGGCCAAT...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTATTGGCCCGCCTCGATaGACTTGTTGTCCTGAATAT +
Preference number: 4 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLIGPPR*TCCPEY
Trigger: ATATTCAGGACAACAAGTTCATCGAGGCGGGCCAAT...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTATTGGCCCGCCTCGATaGACTTGTTGTCCTGAATAT +
Preference number: 4 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPIGPPR*TCCPEY
Trigger: ATATTCAGGACAACAAGTTCATCGAGGCGGGCCAAT...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGTGCAACTGCCCGCACTaGCTGGATGCTGGTCCCATA +
Preference number: 4 (lower is better)
Translates to: NNGSDGFCTCASAWERSMCNCPH*LDAGPI
Trigger: TATGGGACCAGCATCCAGTCAGTGCGGGCAGTTGCA...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATTGCAACTGCCCGCACTaGCTGGATGCTGGTCCCATA +
Preference number: 4 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHCNCPH*LDAGPI
Trigger: TATGGGACCAGCATCCAGTCAGTGCGGGCAGTTGCA...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp GGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGTCACCACCCCATAAATCTCTTCCAGTaGGTCACCCTGTACAATGGC +
Preference number: 4 (lower is better)
Translates to: GWGGRPSTQLSQRACHHPINLFQ*VTLYNG
Trigger: GCCATTGTACAGGGTGACTCACTGGAAGAGATTTAT...GGGGTGGTGACAGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCATAAATCTCTTCCAGTaGGTCACCCTGTACAATGGC +
Preference number: 4 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALINLFQ*VTLYNG
Trigger: GCCATTGTACAGGGTGACTCACTGGAAGAGATTTAT...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATACCAAATCAAACTCATaGCGCAGCTGGCCAAGCAAG +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHTKSNS*RSWPSK
Trigger: CTTGCTTGGCCAGCTGCGTCATGAGTTTGATTTGGT...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCCTGGTTGGTGCTATTTaGAGCAGTGTCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSLVGAI*SSVWGW
Trigger: CCAGCCCCAGACACTGCTTCAAATAGCACCAACCAG...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATAGAGGGCTATGGGGATaGCTGCTGTCCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHRGLWG*LLSCSA
Trigger: TGCAGAGCAGGACAGCAGTCATCCCCATAGCCCTCT...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCTGCCTTCAAGCAAATaGGAGAATGTGGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRLPSSK*ENVGKQ
Trigger: TTGCTTTCCCACATTCTCTCATTTGCTTGAAGGCAG...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGAGAGCCTCAACAGTGTaGCCACAGGACAGATCTTTG +
Preference number: 4 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGRASTV*PQDRSL
Trigger: CAAAGATCTGTCCTGTGGTCACACTGTTGAGGCTCT...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCGGGCACTTACAGCAGTaGTGGTGCTTGTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSGHLQQ*WCLCMA
Trigger: TGCCATGCACAAGCACCAGCACTGCTGTAAGTGCCC...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTTTGTCTCCTGGGATGTaGTGGTTGCCAATACCCCCA +
Preference number: 4 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTLSPGM*WLPIPP
Trigger: TGGGGGTATTGGCAACCAGCACATCCCAGGAGACAA...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTAGCCTGCTCATGAGTTaGATTCCTCAGATTCACTCC +
Preference number: 4 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLSLLMS*IPQIHS
Trigger: GGAGTGAATCTGAGGAATGCAACTCATGAGCAGGCT...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR GCA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCACAGACCCAGAGCTCATaGTGCTGTTCATCATTTGTT +
Preference number: 4 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPAQTQSS*CCSSFV
Trigger: AACAAATGATGAACAGCAGCATGAGCTCTGGGTCTG...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTACATCTAAGATGCAGTaGTTGCCCCTCTCTGCAACT +
Preference number: 4 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLTSKMQ*LPLSAT
Trigger: AGTTGCAGAGAGGGGCAAGCACTGCATCTTAGATGT...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCCTCAGGGGCAGCAGCTaGTTTCAGGTCAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVLRGSS*FQVKSL
Trigger: GAGAGACTTGACCTGAAAGCAGCTGCTGCCCCTGAG...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGACACAGGACTCTGGCTaGACCTCAGGGGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKTQDSG*TSGAAA
Trigger: AGCTGCTGCCCCTGAGGTGCAGCCAGAGTCCTGTGT...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCAAAAGGAAACCTCTCATaGAGACACATCAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPAKGNLS*RHIRWH
Trigger: ATGCCACCTGATGTGTCTGCATGAGAGGTTTCCTTT...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCACCACACCTGCTGCCTaGACTTGTGGCGGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVTTPAA*TCGGED
Trigger: ATCTTCACCGCCACAAGTGCAGGCAGCAGGTGTGGT...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTGGGCTAGGAAACAAGTaGCTCAATCCTAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTGLGNK*LNPRAK
Trigger: CTTGGCCCTAGGATTGAGGCACTTGTTTCCTAGCCC...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCATCATCCTGGGTCCCATaGTTTATACAGTTAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPASSWVP*FIQLAS
Trigger: TGAGGCTAACTGTATAAAGCATGGGACCCAGGATGA...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGTCACCACCCCTCATCCTGGGTCCCATaGTTTATACAGTTAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GWGGRPSTQLSQRACHHPSSWVP*FIQLAS
Trigger: TGAGGCTAACTGTATAAAGCATGGGACCCAGGATGA...GGGGTGGTGACAGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACAGGATGTTCTTCCCACTaGTTTGCCCACGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTGCSSH*FAHALP
Trigger: AGGGAGGGCGTGGGCAAAGCAGTGGGAAGAACATCC...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTCTCCCATCTGGTTGGTaGTATTTGAAGCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPLPSGW*YLKQCL
Trigger: CAGACACTGCTTCAAATAGCACCAACCAGATGGGAG...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATCTCCTCCGCACAAGTTaGAATGGCACCTGCCACGTC +
Preference number: 4 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHLLRTS*NGTCHV
Trigger: GACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAG...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAACCAGGCCTGTGTCACCTACTCCATCACAAGGCCTGGCTCCTTCAGGACCTCTTGGGGTTTCCAAGTTaGTCTGTATCTTCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: QPGLCHLLHHKAWLLQDLLGFPS*SVSSRA
Trigger: AGCACGAGAAGATACAGAGCAACTTGGAAACCCCAA...GAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAGTAGGTGACACAGGCCTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCATTGGGGTTTCCAAGTTaGTCTGTATCTTCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPALGFPS*SVSSRA
Trigger: AGCACGAGAAGATACAGAGCAACTTGGAAACCCCAA...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTCAAGGCATGATCAGCTaGAATGTCAGCAACAAAACC +
Preference number: 4 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSQGMIS*NVSNKT
Trigger: GGTTTTGTTGCTGACATTGCAGCTGATCATGCCTTG...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACATACATGTCGTTGAGGTaGAGGCTGCCTGGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTYMSLR*RLPGLA
Trigger: GGCCAAGCCAGGCAGCCTCCACCTCAACGACATGTA...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCTTCAGGTCTGTACTaGGCCACAATGGTGACTGAC +
Preference number: 4 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCSSGLY*ATMVTD
Trigger: GTCAGTCACCATTGTGGCCCAGTACAGACCTGAAGA...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR CCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCATCCCCGTCCTGGCATaGAACTTCACAGTTTTCAAT +
Preference number: 4 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRIPVLA*NFTVFN
Trigger: ATTGAAAACTGTGAAGTTCCATGCCAGGACGGGGAT...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTCGCTGTCACTGGTGTTaGATGTCACTCCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTRCHWC*MSLPSG
Trigger: ACCTGAAGGGAGTGACATCCAACACCAGTGACAGCG...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194900.8
CDS-3UTR CCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTAGGCCGGGTAGTATGTaGCACACAGGATCCAAATTT +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLRPGSM*HTGSKF
Trigger: AAATTTGGATCCTGTGTGCCACATACTACCCGGCCT...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCGAGTTTTTCAGGGGATaGGACCCAAATGTAGTGCCC +
Preference number: 4 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLEFFRG*DPNVVP
Trigger: GGGCACTACATTTGGGTCCCATCCCCTGAAAAACTC...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCCTGTTGGGGAGGGGCTaGAGCAGAGCATATGAAGCA +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSLLGRG*SRAYEA
Trigger: TGCTTCATATGCTCTGCTCCAGCCCCTCCCCAACAG...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGGCGAGGGAGGCACGTTaGCTTCAAAGGAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: NNGSDGFCTCASAWERSMAREAR*LQRSTV
Trigger: CACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGC...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATGCGAGGGAGGCACGTTaGCTTCAAAGGAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHAREAR*LQRSTV
Trigger: CACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGC...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCATCCTTATCCTCATCCTaGGTCCCATGCTTTATACAG +
Preference number: 4 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPASLSSS*VPCFIQ
Trigger: CTGTATAAAGCATGGGACCCAGGATGAGGATAAGGA...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACAAGCAGTGTCTGGGGCTaGGGTGGAAGACCAAGCACA +
Preference number: 4 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTSSVWG*GGRPST
Trigger: TGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGCT...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCATGTGGACTCCCATCTaGTTGGTGCTATTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRMWTPI*LVLFEA
Trigger: TGCTTCAAATAGCACCAACCAGATGGGAGTCCACAT...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGTCTCATGGAGCTCTTTaGGGACTCCCTTTTGTTAGG +
Preference number: 4 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRSHGAL*GLPFVR
Trigger: CCTAACAAAAGGGAGTCCCCAAAGAGCTCCATGAGA...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTTCTCATGGAGCTCTTTaGGGACTCCCTTTTGTTAGG +
Preference number: 4 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPSHGAL*GLPFVR
Trigger: CCTAACAAAAGGGAGTCCCCAAAGAGCTCCATGAGA...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTTTTCTTAAGCTCTCATaGAGCTCTTTGGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPFLKLS*SSLGTP
Trigger: GGGAGTCCCCAAAGAGCTCCATGAGAGCTTAAGAAA...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTTTTCTTAAGCTCTCATaGAGCTCTTTGGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPFLKLS*SSLGTP
Trigger: GGGAGTCCCCAAAGAGCTCCATGAGAGCTTAAGAAA...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATTGTATGCTGCTCTCCTaGGCCATGTTTTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENCMLLS*AMFSLL
Trigger: GAGCAAAGAAAACATGGCCCAGGAGAGCAGCATACA...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374355.7
ENST00000542398.1
CDS-3UTR CCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTCGCTGTCACTGGTGTTaGATGTCACTCCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTRCHWC*MSLPVP
Trigger: AGGAACAGGGAGTGACATCCAACACCAGTGACAGCG...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374355.7
ENST00000542398.1
3UTR CAA 72 bp GAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTaGCTACCATCTTCAATCCCTTCCCAACCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ENDQMRVPLVQH*LPSSIPSQPAG
Trigger: CCCAGCTGGTTGGGAAGGGATTGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CAA 72 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTaGGGGTTTCCAAGTTGCTCTGTATCTTCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: QHSTAVLRVCLP*GFPSCSVSSRA
Trigger: AGCACGAGAAGATACAGAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATAGCCTTTGTGCAGGATaGTCTTGCGAGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHSLCAG*SCEALW
Trigger: CCAGAGAGCCTCGCAAGATCATCCTGCACAAAGGCT...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR TCA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCATGTCACTGGCTCATATaGCAAAATAGCATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPACHWLI*QNSILL
Trigger: CAAGAGGATGCTATTTTGTCATATGAGCCAGTGACA...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTAGATCAGGTCATCATTaGCTCGGTCCTTCATTGGGC +
Preference number: 4 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTRSGHH*LGPSLG
Trigger: GCCCAATGAAGGACCGAGTCAATGATGACCTGATCT...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGATAAATCTCTTCCAGTaGGTCACCCTGTACAATGGC +
Preference number: 4 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRINLFQ*VTLYNG
Trigger: GCCATTGTACAGGGTGACTCACTGGAAGAGATTTAT...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCAGTCACATGATGAATaGGATGGCATCATCCCAAAA +
Preference number: 4 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRQSHDE*DGIIPK
Trigger: TTTTGGGATGATGCCATCTCATTCATCATGTGACTG...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGGTATCATGCTTACTTTaGATCTTTGTTTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PASSLQYGGEGGTLASKEVSCLL*IFVSLP
Trigger: GGGAAGAGAAACAAAGATTCAAAGTAAGCATGATAC...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACACCCAGCTCGGCTAGCTaGTCATCACTAAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTPSSAS*SSLRRE
Trigger: CTCTCTCCTTAGTGATGATCAGCTAGCCGAGCTGGG...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTAAGAGGGCTATGGGGATaGCTGCTGTCCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLRGLWG*LLSCSA
Trigger: TGCAGAGCAGGACAGCAGTCATCCCCATAGCCCTCT...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTTTGCTCTTGACCTTATaGATTATGACAGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSLLLTL*IMTALP
Trigger: AGGAAGTGCTGTCATAATTCATAAGGTCAAGAGCAA...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATCTGCCTTCAAGCAAATaGGAGAATGTGGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENLPSSK*ENVGKQ
Trigger: TTGCTTTCCCACATTCTCTCATTTGCTTGAAGGCAG...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGTTTGTCCTCAGGAGATaGATTTTCTTAAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: PASSLQYGGEGGTLASKEFVLRR*IFLSSH
Trigger: ATGAGAGCTTAAGAAAATTCATCTCCTGAGGACAAA...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCTTCTCGTGCTGGGGCTaGATGTTCTTCAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVFSCWG*MFFSCT
Trigger: GGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAA...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTTACAGCAGTGCTGGTaGTTGTGCATGGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQLQQCW*LCMALP
Trigger: GGGCAGTGCCATGCACAAGCACCAGCACTGCTGTAA...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTTCGTGCCTCACATCCTaGAGATTGGTGTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTSCLTS*RLVLFT
Trigger: GGTGAACAACACCAATCTGCAGGATGTGAGGCACGA...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACAGCCACAGCTTCCTCGTaGCTCACATCCTGCAGATTG +
Preference number: 4 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTATASS*LTSCRL
Trigger: CAATCTGCAGGATGTGAGGCACGAGGAAGCTGTGGC...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATAGCCTGCTCATGAGTTaGATTCCTCAGATTCACTCC +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHSLLMS*IPQIHS
Trigger: GGAGTGAATCTGAGGAATGCAACTCATGAGCAGGCT...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR GCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGGGGATCACACCGATCTaGTCACTTTCTCCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQGITPI*SLSPCG
Trigger: CCCACACGGAGAAAGTGAGCAGATCGGTGTGATCCC...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCTTGTCCTTTGGAACTaGTTTCGCTGTCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHLVLWN*FRCHWC
Trigger: ACACCAGTGACAGCGAAAGCAGTTCCAAAGGACAAG...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000542398.1
CDS-3UTR GCA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGGATGATCACAGGCCTTaGATAGTGAATTTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRDDHRP*IVNFLP
Trigger: CGGCAAGAAATTCACTATGCAAGGCCTGTGATCATC...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTGATGATCACAGGCCTTaGATAGTGAATTTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLDDHRP*IVNFLP
Trigger: CGGCAAGAAATTCACTATGCAAGGCCTGTGATCATC...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTGCTTGTTCATATGTCTaGCTTCGGTTCATTTCCATA +
Preference number: 4 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSACSYV*LRFISI
Trigger: TATGGAAATGAACCGAAGGCAGACATATGAACAAGC...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCTCACTTCACAAGCCGTaGAGCTGTCCAGAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVSLHKP*SCPESV
Trigger: GACAGACTCTGGACAGCTGCACGGCTTGTGAAGTGA...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGACAGATAGGGAGAAATaGCCAGGAGCATCTCATCAT +
Preference number: 4 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRTDREK*PGASHH
Trigger: ATGATGAGATGCTCCTGGGCATTTCTCCCTATCTGT...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGTGCACCGTTCAGAGCTaGAAGACAGCAGTACAGATA +
Preference number: 4 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGCTVQS*KTAVQI
Trigger: TATCTGTACTGCTGTCTTGCAGCTCTGAACGGTGCA...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGCTCAGGGGCAGCAGCTaGTTTCAGGTCAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: NNGSDGFCTCASAWERSMLRGSS*FQVKSL
Trigger: GAGAGACTTGACCTGAAAGCAGCTGCTGCCCCTGAG...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGTCATCCTGGGTCCCATaGTTTATACAGTTAGCCTCA +
Preference number: 4 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRSSWVP*FIQLAS
Trigger: TGAGGCTAACTGTATAAAGCATGGGACCCAGGATGA...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTAGGATGTTCTTCCCACTaGTTTGCCCACGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLGCSSH*FAHALP
Trigger: AGGGAGGGCGTGGGCAAAGCAGTGGGAAGAACATCC...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTTGCTACCATCTTCAGGATGTTCTTCCCACTaGTTTGCCCACGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: QENDQMRVPLVQHLLPSSGCSSH*FAHALP
Trigger: AGGGAGGGCGTGGGCAAAGCAGTGGGAAGAACATCC...TGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTACTCCTCCGCACAAGTTaGAATGGCACCTGCCACGTC +
Preference number: 4 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLLLRTS*NGTCHV
Trigger: GACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAG...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATTTGGGGTTTCCAAGTTaGTCTGTATCTTCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENLGFPS*SVSSRA
Trigger: AGCACGAGAAGATACAGAGCAACTTGGAAACCCCAA...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATCAAGGCATGATCAGCTaGAATGTCAGCAACAAAACC +
Preference number: 4 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENQGMIS*NVSNKT
Trigger: GGTTTTGTTGCTGACATTGCAGCTGATCATGCCTTG...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACACTCCCTGTTCCTGTATaGTGCTCTCCTGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTLPVPV*CSPGPC
Trigger: ACATGGCCCAGGAGAGCAGCATACAGGAACAGGGAG...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374355.7
ENST00000542398.1
CDS-3UTR CCA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCATACCAGTCCCGGTTaGTACAGGTGCACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKHTSPG*YRCTLA
Trigger: GGCCAGAGTGCACCTGTACCAACCGGGACTGGTATG...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTACATACCAGTCCCGGTTaGTACAGGTGCACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLHTSPG*YRCTLA
Trigger: GGCCAGAGTGCACCTGTACCAACCGGGACTGGTATG...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACAGAGGTGGAGGCTGCCTaGCTTGGCCACCTTCAAATA +
Preference number: 4 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTEVEAA*LGHLQI
Trigger: TATTTGAAGGTGGCCAAGCCAGGCAGCCTCCACCTC...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTATCCCCGTCCTGGCATaGAACTTCACAGTTTTCAAT +
Preference number: 4 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLIPVLA*NFTVFN
Trigger: ATTGAAAACTGTGAAGTTCCATGCCAGGACGGGGAT...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTATCCCCGTCCTGGCATaGAACTTCACAGTTTTCAAT +
Preference number: 4 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPIPVLA*NFTVFN
Trigger: ATTGAAAACTGTGAAGTTCCATGCCAGGACGGGGAT...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTATCCCCGTCCTGGCATaGAACTTCACAGTTTTCAAT +
Preference number: 4 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLIPVLA*NFTVFN
Trigger: ATTGAAAACTGTGAAGTTCCATGCCAGGACGGGGAT...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGAGGCCGGGTAGTATGTaGCACACAGGATCCAAATTT +
Preference number: 4 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGRPGSM*HTGSKF
Trigger: AAATTTGGATCCTGTGTGCCACATACTACCCGGCCT...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTTCACAAGAGAATGGTTaGAGGGGATTCTTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSSQENG*RGFFRV
Trigger: AACTCTGAAGAATCCCCTCCAACCATTCTCTTGTGA...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCTCACAAGAGAATGGTTaGAGGGGATTCTTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALSQENG*RGFFRV
Trigger: AACTCTGAAGAATCCCCTCCAACCATTCTCTTGTGA...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCACCTGTGCTAGCGCTTaGGAAAGGTCCATGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSTCASA*ERSMQE
Trigger: TTCCTGCATGGACCTTTCCCAAGCGCTAGCACAGGT...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCACCTGTGCTAGCGCTTaGGAAAGGTCCATGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVTCASA*ERSMQE
Trigger: TTCCTGCATGGACCTTTCCCAAGCGCTAGCACAGGT...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCCCCTTCCCAACCAGCTaGGATAGAAGATGCCATCTG +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSPFPTS*DRRCHL
Trigger: CAGATGGCATCTTCTATCCCAGCTGGTTGGGAAGGG...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTCCTCATTCTGCTGGTTaGACAACTGTTAACAGAGTT +
Preference number: 4 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSPHSAG*TTVNRV
Trigger: AACTCTGTTAACAGTTGTCCAACCAGCAGAATGAGG...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCATTCTGCTGGTTaGACAACTGTTAACAGAGTT +
Preference number: 4 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRPHSAG*TTVNRV
Trigger: AACTCTGTTAACAGTTGTCCAACCAGCAGAATGAGG...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTTCCTTATCCTCATCCTaGGTCCCATGCTTTATACAG +
Preference number: 4 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPSLSSS*VPCFIQ
Trigger: CTGTATAAAGCATGGGACCCAGGATGAGGATAAGGA...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGAGCAGTGTCTGGGGCTaGGGTGGAAGACCAAGCACA +
Preference number: 4 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKSSVWG*GGRPST
Trigger: TGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGCT...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCGGACTCCCATCTGGTTaGTGCTATTTGAAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCGLPSG*CYLKQC
Trigger: ACACTGCTTCAAATAGCACCAACCAGATGGGAGTCC...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTATGTGGACTCCCATCTaGTTGGTGCTATTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLMWTPI*LVLFEA
Trigger: TGCTTCAAATAGCACCAACCAGATGGGAGTCCACAT...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTATGTGGACTCCCATCTaGTTGGTGCTATTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLMWTPI*LVLFEA
Trigger: TGCTTCAAATAGCACCAACCAGATGGGAGTCCACAT...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATATGTGGACTCCCATCTaGTTGGTGCTATTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENMWTPI*LVLFEA
Trigger: TGCTTCAAATAGCACCAACCAGATGGGAGTCCACAT...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCGGAAACACTGGTAGCTaGCAGGTCACTTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVGNTGS*QVTFSG
Trigger: GCCAGAGAAAGTGACCTGCCAGCTACCAGTGTTTCC...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATCCGCACAAGTTGCAATaGCACCTGCCACGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHPHKLQ*HLPRQN
Trigger: GTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGG...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTGCAAATGAGAGAATGTaGGAAAGCAAGCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPANERM*ESKQPA
Trigger: TGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGC...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTGCAAATGAGAGAATGTaGGAAAGCAAGCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLANERM*ESKQPA
Trigger: TGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGC...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTTGTCACTGGCTCATATaGCAAAATAGCATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPCHWLI*QNSILL
Trigger: CAAGAGGATGCTATTTTGTCATATGAGCCAGTGACA...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATTCATTGGGCCCAGGATaGTCACAGGCCTTGCATAGT +
Preference number: 4 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHSLGPG*SQALHS
Trigger: ACTATGCAAGGCCTGTGATCATCCTGGGCCCAATGA...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTACTGGTTGGTGCTATTTaGAGCAGTGTCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLLVGAI*SSVWGW
Trigger: CCAGCCCCAGACACTGCTTCAAATAGCACCAACCAG...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCAGAGCCTCAACAGTGTaGCCACAGGACAGATCTTTG +
Preference number: 4 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVRASTV*PQDRSL
Trigger: CAAAGATCTGTCCTGTGGTCACACTGTTGAGGCTCT...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCGGAGAACATCAGCTGTaGAGACAGAGCCTCAACAGT +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSGEHQL*RQSLNS
Trigger: ACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCC...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTCTTTCTTCTCTAATTTaGAATGGTTGCAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLLSSLI*NGCSRA
Trigger: CGCTCTGCTGCAACCATTTCAAATTAGAGAAGAAAG...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374355.7
CDS-3UTR GCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTACAAGCAGAGAATGGGTaGTGTGAGGACCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLQAENG*CEDRFC
Trigger: GCAGAAGCGGTCCTCACAGCACCCATTCTCTGCTTG...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGGCCACAGCTTCCTCGTaGCTCACATCCTGCAGATTG +
Preference number: 4 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKATASS*LTSCRL
Trigger: CAATCTGCAGGATGTGAGGCACGAGGAAGCTGTGGC...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR GCA 90 bp CAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTTGCTACCATCTTCACCGTTTCAGAGCAGCTaGAGCCTGCTCATGAGTTGC +
Preference number: 4 (lower is better)
Translates to: QENDQMRVPLVQHLLPSSPFQSS*SLLMSC
Trigger: GCAACTCATGAGCAGGCTGCAGCTGCTCTGAAACGG...TGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR GCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACCCAGAGCTCATaGTGCTGTTCATCATTTGTT +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHQTQSS*CCSSFV
Trigger: AACAAATGATGAACAGCAGCATGAGCTCTGGGTCTG...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATGATGATCACAGGCCTTaGATAGTGAATTTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHDDHRP*IVNFLP
Trigger: CGGCAAGAAATTCACTATGCAAGGCCTGTGATCATC...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTAATGGGGTAAAGTTGTaGTTGCTGCAGTCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLNGVKL*LLQSLD
Trigger: ATCAAGAGACTGCAGCAAGCACAACTTTACCCCATT...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGAATGGGGTAAAGTTGTaGTTGCTGCAGTCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRNGVKL*LLQSLD
Trigger: ATCAAGAGACTGCAGCAAGCACAACTTTACCCCATT...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATAATGGGGTAAAGTTGTaGTTGCTGCAGTCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENNGVKL*LLQSLD
Trigger: ATCAAGAGACTGCAGCAAGCACAACTTTACCCCATT...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTGCTTGTTCATATGTCTaGCTTCGGTTCATTTCCATA +
Preference number: 4 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSACSYV*LRFISI
Trigger: TATGGAAATGAACCGAAGGCAGACATATGAACAAGC...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCACAGATAGGGAGAAATaGCCAGGAGCATCTCATCAT +
Preference number: 4 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCTDREK*PGASHH
Trigger: ATGATGAGATGCTCCTGGGCATTTCTCCCTATCTGT...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATCTGTCGCCATTACGTTaGACCGTTCAGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHLSPLR*TVQSCK
Trigger: CTTGCAGCTCTGAACGGTGCAACGTAATGGCGACAG...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTCTCTGTTCTCCCCTaGGTCGTCCCTCCAGTATGG +
Preference number: 4 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLFSVLP*VVPPVW
Trigger: CCATACTGGAGGGACGACGCAGGGGAGAACAGAGAA...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGTCATCCTGGGTCCCATaGTTTATACAGTTAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGSSWVP*FIQLAS
Trigger: TGAGGCTAACTGTATAAAGCATGGGACCCAGGATGA...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTAGAGAATCAACCTCCCTaGTCACCCCTCCTCACCAGA +
Preference number: 4 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLENQPP*SPLLTR
Trigger: TCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTC...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTAAAATGTCAGCATTTTaGCACCACAGATGTGGACTC +
Preference number: 4 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPKMSAF*HHRCGL
Trigger: GAGTCCACATCTGTGGTGGCAAAATGCTGACATTTT...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTAAAATGTCAGCATTTTaGCACCACAGATGTGGACTC +
Preference number: 4 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLKMSAF*HHRCGL
Trigger: GAGTCCACATCTGTGGTGGCAAAATGCTGACATTTT...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTTCCCTTTTGTTAGGCTaGCTTCAAGCAAATGAGAGA +
Preference number: 4 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPSLLLG*LQANER
Trigger: TCTCTCATTTGCTTGAAGGCAGCCTAACAAAAGGGA...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATTTGGGGTTTCCAAGTTaGTCTGTATCTTCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHLGFPS*SVSSRA
Trigger: AGCACGAGAAGATACAGAGCAACTTGGAAACCCCAA...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCTCACATCCTGCAGATTaGTGTTGTTCACCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVSHPAD*CCSPPA
Trigger: TGCTGGCGGTGAACAACACCAATCTGCAGGATGTGA...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTAACAATGGTGACTGACTaGCCGGCCCGTTTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLTMVTD*PARFRA
Trigger: TGCTCTGAAACGGGCCGGCCAGTCAGTCACCATTGT...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR CCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATCCACCCTCTTCTTACTaGGGATCACACCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHPPSSY*GSHRSA
Trigger: AGCAGATCGGTGTGATCCCCAGTAAGAAGAGGGTGG...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATAGGTTATCATTAAATTaGCCCGCCTCGATGAACTTG +
Preference number: 4 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENRLSLN*PASMNL
Trigger: CAAGTTCATCGAGGCGGGCCAATTTAATGATAACCT...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCCCTGCTCCAGTTTCATaGCTTTGTCATAGATCTTAT +
Preference number: 4 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALPAPVS*LCHRSY
Trigger: ATAAGATCTATGACAAAGCCATGAAACTGGAGCAGG...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCGAGTTTTTCAGGGGATaGGACCCAAATGTAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVEFFRG*DPNVVP
Trigger: GGGCACTACATTTGGGTCCCATCCCCTGAAAAACTC...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTTCACAAGAGAATGGTTaGAGGGGATTCTTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLSQENG*RGFFRV
Trigger: AACTCTGAAGAATCCCCTCCAACCATTCTCTTGTGA...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATCCCTTCCCAACCAGCTaGGATAGAAGATGCCATCTG +
Preference number: 4 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHPFPTS*DRRCHL
Trigger: CAGATGGCATCTTCTATCCCAGCTGGTTGGGAAGGG...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCTGCAGACACATCAGGTaGCATAAAACAATAGGCAAT +
Preference number: 4 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRCRHIR*HKTIGN
Trigger: ATTGCCTATTGTTTTATGCCACCTGATGTGTCTGCA...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTAAGCCTTTAGAACCTTaGCAAATTGGATTCTATGCA +
Preference number: 4 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSKPLEP*QIGFYA
Trigger: TGCATAGAATCCAATTTGCCAAGGTTCTAAAGGCTT...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGCTCCATCACAAGGCCTaGCTCCTTCAGGACCTCATA +
Preference number: 4 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQLHHKA*LLQDLI
Trigger: TATGAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAG...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACAATCCCAGCACAGAACTaGAAGGCAAGTGACTCCCTG +
Preference number: 4 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTIPAQN*KASDSL
Trigger: CAGGGAGTCACTTGCCTTCCAGTTCTGTGCTGGGAT...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTTGCTACCATCTTCATGTCTGGGGCTGGGGTaGAAGACCAAGCACACAACT +
Preference number: 4 (lower is better)
Translates to: QENDQMRVPLVQHLLPSSCLGLG*KTKHTT
Trigger: AGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACA...TGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGCACACACATTTCAGGTaGCTCATTCATCCAGATGTT +
Preference number: 4 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRHTHFR*LIHPDV
Trigger: AACATCTGGATGAATGAGCCACCTGAAATGTGTGTG...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CAA 72 bp TGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTaGCCCACGCCCTCCCTTCTCAACTACTTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: WPPKVWDVLPTA*PTPSLLNYFKK
Trigger: CTTCTTAAAGTAGTTGAGAAGGGAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CAA 72 bp ATTATGACAGCACTTCCTAAGACTCCTCCGCACAAGTaGCAATGGCACCTGCCACGTCAGAACTGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: IMTALPKTPPHK*QWHLPRQNCQN
Trigger: GTTCTGGCAGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTGCTGTCATAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTAGCTGCAGCCTGCTCATaGGTTGCATTCCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLAAACS*VAFLRF
Trigger: GAATCTGAGGAATGCAACTCATGAGCAGGCTGCAGC...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR TCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACAAGATCAGGTCATCATTaGCTCGGTCCTTCATTGGGC +
Preference number: 4 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTRSGHH*LGPSLG
Trigger: GCCCAATGAAGGACCGAGTCAATGATGACCTGATCT...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGTCACATGATGAATaGGATGGCATCATCCCAAAA +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHQSHDE*DGIIPK
Trigger: TTTTGGGATGATGCCATCTCATTCATCATGTGACTG...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATACCAAATCAAACTCATaGCGCAGCTGGCCAAGCAAG +
Preference number: 4 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHTKSNS*RSWPSK
Trigger: CTTGCTTGGCCAGCTGCGTCATGAGTTTGATTTGGT...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp GGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGTCACCACCCCTTTGTCCTCAGGAGATaGATTTTCTTAAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: GWGGRPSTQLSQRACHHPFVLRR*IFLSSH
Trigger: ATGAGAGCTTAAGAAAATTCATCTCCTGAGGACAAA...GGGGTGGTGACAGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACAGGGATCACACCGATCTaGTCACTTTCTCCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: VKIPLITVTAIRLWEKATGITPI*SLSPCG
Trigger: CCCACACGGAGAAAGTGAGCAGATCGGTGTGATCCC...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTTCCCTTCAGGTTCTTTaGTCCATAATAATCGTCACT +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLSLQVL*SIIIVT
Trigger: AGTGACGATTATTATGGAGCAAAGAACCTGAAGGGA...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194900.8
CDS-3UTR GCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCACATCTAAGATGCAGTaGTTGCCCCTCTCTGCAACT +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSTSKMQ*LPLSAT
Trigger: AGTTGCAGAGAGGGGCAAGCACTGCATCTTAGATGT...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACACGGAAACATCTAAGATaGAGTGCTTGCCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTRKHLR*SACPSL
Trigger: CAGAGAGGGGCAAGCACTGCATCTTAGATGTTTCCG...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGCGGAAACATCTAAGATaGAGTGCTTGCCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: NNGSDGFCTCASAWERSMRKHLR*SACPSL
Trigger: CAGAGAGGGGCAAGCACTGCATCTTAGATGTTTCCG...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATAATGGGGTAAAGTTGTaGTTGCTGCAGTCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHNGVKL*LLQSLD
Trigger: ATCAAGAGACTGCAGCAAGCACAACTTTACCCCATT...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTGCTTGTTCATATGTCTaGCTTCGGTTCATTTCCATA +
Preference number: 4 (lower is better)
Translates to: LPRESRCPFLILILGPMLACSYV*LRFISI
Trigger: TATGGAAATGAACCGAAGGCAGACATATGAACAAGC...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTGTCATAGATCTTATTTaGTTGTTCATATGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSVIDLI*LFICLP
Trigger: AGGCAGACATATGAACAAGCAAATAAGATCTATGAC...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACAGAGAATCAACCTCCCTaGTCACCCCTCCTCACCAGA +
Preference number: 4 (lower is better)
Translates to: VKIPLITVTAIRLWEKATENQPP*SPLLTR
Trigger: TCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTC...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGGCACGGTTGAGACTTTaGCACTTAGTTAACATCAGA +
Preference number: 4 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGARLRL*HLVNIR
Trigger: TCTGATGTTAACTAAGTGGCAAAGTCTCAACCGTGC...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGTCCCTTTTGTTAGGCTaGCTTCAAGCAAATGAGAGA +
Preference number: 4 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGSLLLG*LQANER
Trigger: TCTCTCATTTGCTTGAAGGCAGCCTAACAAAAGGGA...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGCCTGTTCCTGTATGCTaGTCTCCTGGGCCATGTTTT +
Preference number: 4 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQPVPVC*SPGPCF
Trigger: AAAACATGGCCCAGGAGAGCAGCATACAGGAACAGG...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374355.7
ENST00000542398.1
CDS-3UTR CCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATGAATTATGGCTTATGTaGTTGTCAGCCAAGGCAGTA +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHELWLM*LSAKAV
Trigger: TACTGCCTTGGCTGACAACCACATAAGCCATAATTC...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCACTCACTTTCTCCGTGTaGGGTCACCAGCCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LQANERMWESKQPAHHKALTFSV*GHQPCL
Trigger: CAGGCAAGGCTGGTGACCCCACACGGAGAAAGTGAG...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCCACCCTCTTCTTACTaGGGATCACACCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKPPSSY*GSHRSA
Trigger: AGCAGATCGGTGTGATCCCCAGTAAGAAGAGGGTGG...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCAGGCCGGGTAGTATGTaGCACACAGGATCCAAATTT +
Preference number: 4 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVRPGSM*HTGSKF
Trigger: AAATTTGGATCCTGTGTGCCACATACTACCCGGCCT...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCAGGTTATCATTAAATTaGCCCGCCTCGATGAACTTG +
Preference number: 4 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLRLSLN*PASMNL
Trigger: CAAGTTCATCGAGGCGGGCCAATTTAATGATAACCT...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGACCTGTGCTAGCGCTTaGGAAAGGTCCATGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKTCASA*ERSMQE
Trigger: TTCCTGCATGGACCTTTCCCAAGCGCTAGCACAGGT...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGTGGCCCCCAAAAGTTTaGGATGTTCTTCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: NNGSDGFCTCASAWERSMWPPKV*DVLPTA
Trigger: AGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCA...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCGGACTCCCATCTGGTTaGTGCTATTTGAAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSGLPSG*CYLKQC
Trigger: ACACTGCTTCAAATAGCACCAACCAGATGGGAGTCC...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTAGGAAACACTGGTAGCTaGCAGGTCACTTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLGNTGS*QVTFSG
Trigger: GCCAGAGAAAGTGACCTGCCAGCTACCAGTGTTTCC...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACAAGATGTGTTCTTCAGTaGGGCCACAGCTTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: VKIPLITVTAIRLWEKATRCVLQ*GHSFLV
Trigger: CACGAGGAAGCTGTGGCCTCACTGAAGAACACATCT...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR TCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTTGTCACTGGCTCATATaGCAAAATAGCATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTCHWLI*QNSILL
Trigger: CAAGAGGATGCTATTTTGTCATATGAGCCAGTGACA...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGATTGGCCCGCCTCGATaGACTTGTTGTCCTGAATAT +
Preference number: 4 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQIGPPR*TCCPEY
Trigger: ATATTCAGGACAACAAGTTCATCGAGGCGGGCCAAT...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCACCCAGCTCGGCTAGCTaGTCATCACTAAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LQANERMWESKQPAHHKAPSSAS*SSLRRE
Trigger: CTCTCTCCTTAGTGATGATCAGCTAGCCGAGCTGGG...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTTGCTCTTGACCTTATaGATTATGACAGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCLLLTL*IMTALP
Trigger: AGGAAGTGCTGTCATAATTCATAAGGTCAAGAGCAA...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGAGCCTGCTCATGAGTTaGATTCCTCAGATTCACTCC +
Preference number: 4 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQSLLMS*IPQIHS
Trigger: GGAGTGAATCTGAGGAATGCAACTCATGAGCAGGCT...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR GCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGCTTGTCCTTTGGAACTaGTTTCGCTGTCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQLVLWN*FRCHWC
Trigger: ACACCAGTGACAGCGAAAGCAGTTCCAAAGGACAAG...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000542398.1
CDS-3UTR GCA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACACTTGGGAAAGGTCCATaGAGGAATGGGCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: VKIPLITVTAIRLWEKATLGKGP*RNGHSH
Trigger: GTGACTGTGCCCATTCCTGCATGGACCTTTCCCAAG...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCACAGATAGGGAGAAATaGCCAGGAGCATCTCATCAT +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSTDREK*PGASHH
Trigger: ATGATGAGATGCTCCTGGGCATTTCTCCCTATCTGT...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGTGCACCGTTCAGAGCTaGAAGACAGCAGTACAGATA +
Preference number: 4 (lower is better)
Translates to: NNGSDGFCTCASAWERSMCTVQS*KTAVQI
Trigger: TATCTGTACTGCTGTCTTGCAGCTCTGAACGGTGCA...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGCTCCCATCTGGTTGGTaGTATTTGAAGCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: NNGSDGFCTCASAWERSMLPSGW*YLKQCL
Trigger: CAGACACTGCTTCAAATAGCACCAACCAGATGGGAG...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCAGGGTCATCAGGGACATaGGGATTGTCGATGCCACCT +
Preference number: 4 (lower is better)
Translates to: LQANERMWESKQPAHHKAGSSGT*GLSMPP
Trigger: AGGTGGCATCGACAATCCCCATGTCCCTGATGACCC...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGTCTTCAGGTCTGTACTaGGCCACAATGGTGACTGAC +
Preference number: 4 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKSSGLY*ATMVTD
Trigger: GTCAGTCACCATTGTGGCCCAGTACAGACCTGAAGA...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR CCA 90 bp CAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTTGCTACCATCTTCATCTTCAGGTCTGTACTaGGCCACAATGGTGACTGAC +
Preference number: 4 (lower is better)
Translates to: QENDQMRVPLVQHLLPSSSSGLY*ATMVTD
Trigger: GTCAGTCACCATTGTGGCCCAGTACAGACCTGAAGA...TGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
CDS-3UTR CCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGAGGCCGGGTAGTATGTaGCACACAGGATCCAAATTT +
Preference number: 4 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQRPGSM*HTGSKF
Trigger: AAATTTGGATCCTGTGTGCCACATACTACCCGGCCT...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTAGGTTATCATTAAATTaGCCCGCCTCGATGAACTTG +
Preference number: 4 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTRLSLN*PASMNL
Trigger: CAAGTTCATCGAGGCGGGCCAATTTAATGATAACCT...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACAACCTGTGCTAGCGCTTaGGAAAGGTCCATGCAGGAA +
Preference number: 4 (lower is better)
Translates to: VKIPLITVTAIRLWEKATTCASA*ERSMQE
Trigger: TTCCTGCATGGACCTTTCCCAAGCGCTAGCACAGGT...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATTGCAGACACATCAGGTaGCATAAAACAATAGGCAAT +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHCRHIR*HKTIGN
Trigger: ATTGCCTATTGTTTTATGCCACCTGATGTGTCTGCA...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAACCAGGCCTGTGTCACCTACTCCATCACAAGGCCTGGCTCCTTCAGGACCTCAGCACAACATGGTTTTaGTTTAACAGCAGCTTAAAA +
Preference number: 4 (lower is better)
Translates to: QPGLCHLLHHKAWLLQDLSTTWF*FNSSLK
Trigger: TTTTAAGCTGCTGTTAAACCAAAACCATGTTGTGCT...GAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAGTAGGTGACACAGGCCTGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTAAGCCTTTAGAACCTTaGCAAATTGGATTCTATGCA +
Preference number: 4 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLKPLEP*QIGFYA
Trigger: TGCATAGAATCCAATTTGCCAAGGTTCTAAAGGCTT...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATAAGCCTTTAGAACCTTaGCAAATTGGATTCTATGCA +
Preference number: 4 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENKPLEP*QIGFYA
Trigger: TGCATAGAATCCAATTTGCCAAGGTTCTAAAGGCTT...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGGCAGGTCACTTTCTCTaGCCATTTTTCTCACCCAGT +
Preference number: 4 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQAGHFL*PFFSPS
Trigger: ACTGGGTGAGAAAAATGGCCAGAGAAAGTGACCTGC...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACAGCAGGTCACTTTCTCTaGCCATTTTTCTCACCCAGT +
Preference number: 4 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTAGHFL*PFFSPS
Trigger: ACTGGGTGAGAAAAATGGCCAGAGAAAGTGACCTGC...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCGCAAATGAGAGAATGTaGGAAAGCAAGCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSANERM*ESKQPA
Trigger: TGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGC...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTCTCATGGAGCTCTTTaGGGACTCCCTTTTGTTAGG +
Preference number: 4 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQSHGAL*GLPFVR
Trigger: CCTAACAAAAGGGAGTCCCCAAAGAGCTCCATGAGA...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACAGGGTGTGTCTCCCTTTaGGGTTTCCAAGTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VKIPLITVTAIRLWEKATGCVSL*GFQVAL
Trigger: CAGAGCAACTTGGAAACCCCAAAGGGAGACACACCC...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATGTATCATGCTTACTTTaGATCTTTGTTTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHVSCLL*IFVSLP
Trigger: GGGAAGAGAAACAAAGATTCAAAGTAAGCATGATAC...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGCTGCCTTCAAGCAAATaGGAGAATGTGGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: NNGSDGFCTCASAWERSMLPSSK*ENVGKQ
Trigger: TTGCTTTCCCACATTCTCTCATTTGCTTGAAGGCAG...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACACTGCCTTCAAGCAAATaGGAGAATGTGGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTLPSSK*ENVGKQ
Trigger: TTGCTTTCCCACATTCTCTCATTTGCTTGAAGGCAG...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATTTTGTCCTCAGGAGATaGATTTTCTTAAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHFVLRR*IFLSSH
Trigger: ATGAGAGCTTAAGAAAATTCATCTCCTGAGGACAAA...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACACAGACCCAGAGCTCATaGTGCTGTTCATCATTTGTT +
Preference number: 4 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTQTQSS*CCSSFV
Trigger: AACAAATGATGAACAGCAGCATGAGCTCTGGGTCTG...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCACTGTCGCCATTACGTTaGACCGTTCAGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LQANERMWESKQPAHHKALSPLR*TVQSCK
Trigger: CTTGCAGCTCTGAACGGTGCAACGTAATGGCGACAG...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATAAAGGAAACCTCTCATaGAGACACATCAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHKGNLS*RHIRWH
Trigger: ATGCCACCTGATGTGTCTGCATGAGAGGTTTCCTTT...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCACACTTACAGCAGTGCTaGTGCTTGTGCATGGCACTG +
Preference number: 4 (lower is better)
Translates to: LQANERMWESKQPAHHKAHLQQC*CLCMAL
Trigger: CAGTGCCATGCACAAGCACCAGCACTGCTGTAAGTG...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCTCACAAGAGAATGGTTaGAGGGGATTCTTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSSQENG*RGFFRV
Trigger: AACTCTGAAGAATCCCCTCCAACCATTCTCTTGTGA...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTTGCAGACACATCAGGTaGCATAAAACAATAGGCAAT +
Preference number: 4 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTCRHIR*HKTIGN
Trigger: ATTGCCTATTGTTTTATGCCACCTGATGTGTCTGCA...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTAGCACAACATGGTTTTaGTTTAACAGCAGCTTAAAA +
Preference number: 4 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPSTTWF*FNSSLK
Trigger: TTTTAAGCTGCTGTTAAACCAAAACCATGTTGTGCT...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTAGCACAACATGGTTTTaGTTTAACAGCAGCTTAAAA +
Preference number: 4 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPSTTWF*FNSSLK
Trigger: TTTTAAGCTGCTGTTAAACCAAAACCATGTTGTGCT...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGGGACTCCCATCTGGTTaGTGCTATTTGAAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKGLPSG*CYLKQC
Trigger: ACACTGCTTCAAATAGCACCAACCAGATGGGAGTCC...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTTGCTACCATCTTCATCTCATGGAGCTCTTTaGGGACTCCCTTTTGTTAGG +
Preference number: 4 (lower is better)
Translates to: QENDQMRVPLVQHLLPSSSHGAL*GLPFVR
Trigger: CCTAACAAAAGGGAGTCCCCAAAGAGCTCCATGAGA...TGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATCGATTTCCTCATATTTaGACATGCCATCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHRFPHI*TCHHCH
Trigger: ATGGCAGTGATGGCATGTTCAAATATGAGGAAATCG...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR TCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATTGTCACTGGCTCATATaGCAAAATAGCATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHCHWLI*QNSILL
Trigger: CAAGAGGATGCTATTTTGTCATATGAGCCAGTGACA...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTAATAAATCTCTTCCAGTaGGTCACCCTGTACAATGGC +
Preference number: 4 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLINLFQ*VTLYNG
Trigger: GCCATTGTACAGGGTGACTCACTGGAAGAGATTTAT...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGCAGTCACATGATGAATaGGATGGCATCATCCCAAAA +
Preference number: 4 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQQSHDE*DGIIPK
Trigger: TTTTGGGATGATGCCATCTCATTCATCATGTGACTG...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATCAGTCACATGATGAATaGGATGGCATCATCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHQSHDE*DGIIPK
Trigger: TTTTGGGATGATGCCATCTCATTCATCATGTGACTG...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGACCCAGAGCTCATaGTGCTGTTCATCATTTGTT +
Preference number: 4 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKQTQSS*CCSSFV
Trigger: AACAAATGATGAACAGCAGCATGAGCTCTGGGTCTG...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACACTTGTCCTTTGGAACTaGTTTCGCTGTCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: VKIPLITVTAIRLWEKATLVLWN*FRCHWC
Trigger: ACACCAGTGACAGCGAAAGCAGTTCCAAAGGACAAG...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000542398.1
CDS-3UTR GCA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGGTCATAGATCTTATTTaGTTGTTCATATGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGVIDLI*LFICLP
Trigger: AGGCAGACATATGAACAAGCAAATAAGATCTATGAC...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATGCACGGTTGAGACTTTaGCACTTAGTTAACATCAGA +
Preference number: 4 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHARLRL*HLVNIR
Trigger: TCTGATGTTAACTAAGTGGCAAAGTCTCAACCGTGC...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACAAAAATGTCAGCATTTTaGCACCACAGATGTGGACTC +
Preference number: 4 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTKMSAF*HHRCGL
Trigger: GAGTCCACATCTGTGGTGGCAAAATGCTGACATTTT...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGAAAATGTCAGCATTTTaGCACCACAGATGTGGACTC +
Preference number: 4 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQKMSAF*HHRCGL
Trigger: GAGTCCACATCTGTGGTGGCAAAATGCTGACATTTT...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGTCCCTTTTGTTAGGCTaGCTTCAAGCAAATGAGAGA +
Preference number: 4 (lower is better)
Translates to: NNGSDGFCTCASAWERSMSLLLG*LQANER
Trigger: TCTCTCATTTGCTTGAAGGCAGCCTAACAAAAGGGA...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTACAAGGCATGATCAGCTaGAATGTCAGCAACAAAACC +
Preference number: 4 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLQGMIS*NVSNKT
Trigger: GGTTTTGTTGCTGACATTGCAGCTGATCATGCCTTG...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACAGAATTATGGCTTATGTaGTTGTCAGCCAAGGCAGTA +
Preference number: 4 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTELWLM*LSAKAV
Trigger: TACTGCCTTGGCTGACAACCACATAAGCCATAATTC...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CCA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGCCTCATTCTGCTGGTTaGACAACTGTTAACAGAGTT +
Preference number: 4 (lower is better)
Translates to: NNGSDGFCTCASAWERSMPHSAG*TTVNRV
Trigger: AACTCTGTTAACAGTTGTCCAACCAGCAGAATGAGG...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACACACACACATTTCAGGTaGCTCATTCATCCAGATGTT +
Preference number: 4 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTHTHFR*LIHPDV
Trigger: AACATCTGGATGAATGAGCCACCTGAAATGTGTGTG...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGCACACACATTTCAGGTaGCTCATTCATCCAGATGTT +
Preference number: 4 (lower is better)
Translates to: NNGSDGFCTCASAWERSMHTHFR*LIHPDV
Trigger: AACATCTGGATGAATGAGCCACCTGAAATGTGTGTG...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCTTTGTCCTCAGGAGATaGATTTTCTTAAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSFVLRR*IFLSSH
Trigger: ATGAGAGCTTAAGAAAATTCATCTCCTGAGGACAAA...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTGTCATAGATCTTATTTaGTTGTTCATATGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTVIDLI*LFICLP
Trigger: AGGCAGACATATGAACAAGCAAATAAGATCTATGAC...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACAAAAGGAAACCTCTCATaGAGACACATCAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: VKIPLITVTAIRLWEKATKGNLS*RHIRWH
Trigger: ATGCCACCTGATGTGTCTGCATGAGAGGTTTCCTTT...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCTCCTTTCAGGTTCTTTaGTCCATAATAATCGTCACT +
Preference number: 4 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSSFQVL*SIIIVT
Trigger: AGTGACGATTATTATGGAGCAAAGAACCTGAAAGGA...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374360.8
CDS-3UTR CCA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGCCTGCTCCAGTTTCATaGCTTTGTCATAGATCTTAT +
Preference number: 4 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQPAPVS*LCHRSY
Trigger: ATAAGATCTATGACAAAGCCATGAAACTGGAGCAGG...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTAGCACAACATGGTTTTaGTTTAACAGCAGCTTAAAA +
Preference number: 4 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTSTTWF*FNSSLK
Trigger: TTTTAAGCTGCTGTTAAACCAAAACCATGTTGTGCT...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTAGAACCTTGGCAAATTaGATTCTATGCATTCACTTA +
Preference number: 4 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTRTLAN*ILCIHL
Trigger: TAAGTGAATGCATAGAATCCAATTTGCCAAGGTTCT...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCAGCAGGTCACTTTCTCTaGCCATTTTTCTCACCCAGT +
Preference number: 4 (lower is better)
Translates to: LQANERMWESKQPAHHKAAGHFL*PFFSPS
Trigger: ACTGGGTGAGAAAAATGGCCAGAGAAAGTGACCTGC...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACATTCTCTAATTTGAAATaGTTGCAGCAGAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: VKIPLITVTAIRLWEKATFSNLK*LQQSGL
Trigger: CAGCCCGCTCTGCTGCAACCATTTCAAATTAGAGAA...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374355.7
3UTR CAA 72 bp AGAAACACTGGTAAACCCACTAGTATCATGCTTACTTaGAATCTTTGTTTCTCTTCCCTGGGAGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RNTGKPTSIMLT*NLCFSSLGGGG
Trigger: CCCTCCCCCTCCCAGGGAAGAGAAACAAAGATTCAAAGTAAGCATGATACTAGTGGGTTTACCAGTGTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTTGCTACCATCTTCATTGCTCTTGACCTTATaGATTATGACAGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: QENDQMRVPLVQHLLPSSLLLTL*IMTALP
Trigger: AGGAAGTGCTGTCATAATTCATAAGGTCAAGAGCAA...TGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACAAGGTTATCATTAAATTaGCCCGCCTCGATGAACTTG +
Preference number: 4 (lower is better)
Translates to: VKIPLITVTAIRLWEKATRLSLN*PASMNL
Trigger: CAAGTTCATCGAGGCGGGCCAATTTAATGATAACCT...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTTGCTACCATCTTCACCTGCTCCAGTTTCATaGCTTTGTCATAGATCTTAT +
Preference number: 4 (lower is better)
Translates to: QENDQMRVPLVQHLLPSSPAPVS*LCHRSY
Trigger: ATAAGATCTATGACAAAGCCATGAAACTGGAGCAGG...TGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCCTGCTCCAGTTTCATaGCTTTGTCATAGATCTTAT +
Preference number: 4 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKPAPVS*LCHRSY
Trigger: ATAAGATCTATGACAAAGCCATGAAACTGGAGCAGG...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCATCCTTATCCTCATCCTaGGTCCCATGCTTTATACAG +
Preference number: 4 (lower is better)
Translates to: LQANERMWESKQPAHHKASLSSS*VPCFIQ
Trigger: CTGTATAAAGCATGGGACCCAGGATGAGGATAAGGA...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACACACACACATTTCAGGTaGCTCATTCATCCAGATGTT +
Preference number: 4 (lower is better)
Translates to: VKIPLITVTAIRLWEKATHTHFR*LIHPDV
Trigger: AACATCTGGATGAATGAGCCACCTGAAATGTGTGTG...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCAGCACGGTTGAGACTTTaGCACTTAGTTAACATCAGA +
Preference number: 4 (lower is better)
Translates to: LQANERMWESKQPAHHKAARLRL*HLVNIR
Trigger: TCTGATGTTAACTAAGTGGCAAAGTCTCAACCGTGC...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCAGCTTGTTCATATGTCTaGCTTCGGTTCATTTCCATA +
Preference number: 4 (lower is better)
Translates to: LQANERMWESKQPAHHKAACSYV*LRFISI
Trigger: TATGGAAATGAACCGAAGGCAGACATATGAACAAGC...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR TCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCAGTATCATGCTTACTTTaGATCTTTGTTTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LQANERMWESKQPAHHKAVSCLL*IFVSLP
Trigger: GGGAAGAGAAACAAAGATTCAAAGTAAGCATGATAC...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACAAGAACCTTGGCAAATTaGATTCTATGCATTCACTTA +
Preference number: 4 (lower is better)
Translates to: VKIPLITVTAIRLWEKATRTLAN*ILCIHL
Trigger: TAAGTGAATGCATAGAATCCAATTTGCCAAGGTTCT...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR GCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCAGTCATAGATCTTATTTaGTTGTTCATATGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LQANERMWESKQPAHHKAVIDLI*LFICLP
Trigger: AGGCAGACATATGAACAAGCAAATAAGATCTATGAC...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CCA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCAAGAACCTTGGCAAATTaGATTCTATGCATTCACTTA +
Preference number: 4 (lower is better)
Translates to: LQANERMWESKQPAHHKARTLAN*ILCIHL
Trigger: TAAGTGAATGCATAGAATCCAATTTGCCAAGGTTCT...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
3UTR CAA 72 bp CTATATATAAATAAGATACTTTCTGTCGCCATTACGTaGCACCGTTCAGAGCTGCAAGACAGCAGTACAGAT +
Preference number: 4 (lower is better)
Translates to: LYINKILSVAIT*HRSELQDSSTD
Trigger: ATCTGTACTGCTGTCTTGCAGCTCTGAACGGTGCAACGTAATGGCGACAGAAAGTATCTTATTTATATATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS GCA 90 bp GGGTGGAGGCTGTCGCCTCCGCACCACCAATCGCACCACAGGGCCTaGCTCCTTCAGCGCCTCCACCGCCCGGCTGTGTACCACCTCCGA +
Preference number: 5 (lower is better)
Translates to: GWRLSPPHHQSHHRA*LLQRLHRPAVYHLR
Trigger: TCGGAGGTGGTACACAGCCGGGCGGTGGAGGCGCTGAAGGAGGCAGGCCCTGTGGTGCGATTGGTGGTGCGGAGGCGACAGCCTCCACCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374360.8
ENST00000463252.5
CDS GCA 90 bp CTCCTCTCTCTCTCCCCTGGCTGCCTACCCTTCCGGCTCCACTGCTaGCTGCCCGCCAGCCTCTCGGGCCCCACCCTGCAAACCTGTCCC +
Preference number: 5 (lower is better)
Translates to: LLSLSPGCLPFRLHC*LPASLSGPTLQTCP
Trigger: GGGACAGGTTTGCAGGGTGGGGCCCGAGAGGCTGGCGGGCAGGCAGCAGTGGAGCCGGAAGGGTAGGCAGCCAGGGGAGAGAGAGAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374355.7
CDS CCA 90 bp CTCCCCCTCCAGCACTGGCGGCTCCGTGTCGCCCGTCGTGGCTTCTaGGCCGAGGCCCAGCGGCAAAGAAGAAGCGGGAGCTCAAGCAGA +
Preference number: 5 (lower is better)
Translates to: LPLQHWRLRVARRGF*AEAQRQRRSGSSSR
Trigger: TCTGCTTGAGCTCCCGCTTCTTCTTTGCCGCTGGGCCTCGGCCCAGAAGCCACGACGGGCGACACGGAGCCGCCAGTGCTGGAGGGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS CCA 90 bp AGGCCTGGCCTGCTCATACCAGTCCCGGTTGGTACAGGTGCACTCTaGCCACCAGCTGGGGCCGCTGCCGTTGAGTTTGGGGGTGCTCTT +
Preference number: 5 (lower is better)
Translates to: RPGLLIPVPVGTGAL*PPAGAAAVEFGGAL
Trigger: AAGAGCACCCCCAAACTCAACGGCAGCGGCCCCAGCTGGTGGCCAGAGTGCACCTGTACCAACCGGGACTGGTATGAGCAGGCCAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000194900.8
CDS CCA 90 bp GCCTTTGGGCCCTTTGAGCAGGTTGACCTCCATGATGGTCTCGGGTaGAGGCTGTCGCCTCCGCACCACCAATCGCACCACAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: AFGPFEQVDLHDGLG*RLSPPHHQSHHRAC
Trigger: GCAGGCCCTGTGGTGCGATTGGTGGTGCGGAGGCGACAGCCTCCACCCGAGACCATCATGGAGGTCAACCTGCTCAAAGGGCCCAAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374360.8
ENST00000463252.5
CDS TCA 90 bp CGGCGAGGCCACCGGGCCGGTCAGAGTCCCGCCAGCCCCACCGGCTaGACTGCTTTCTTCTCTAATTTGAAATGGTTGCAGCAGAGCGGG +
Preference number: 5 (lower is better)
Translates to: RRGHRAGQSPASPTG*TAFFSNLKWLQQSG
Trigger: CCCGCTCTGCTGCAACCATTTCAAATTAGAGAAGAAAGCAGTTCAGCCGGTGGGGCTGGCGGGACTCTGACCGGCCCGGTGGCCTCGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374355.7
CDS-3UTR CAA 90 bp GGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGTCACCACCCCGTAAGGGTCGGGGACTaGCCAGTCGCCGTAGCCCGG +
Preference number: 5 (lower is better)
Translates to: GWGGRPSTQLSQRACHHPVRVGD*PVAVAR
Trigger: CCGGGCTACGGCGACTGGCAAGTCCCCGACCCTTAC...GGGGTGGTGACAGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTGGGATGAGCTTGGCCTaGGTGCGAGGGGTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSGMSLA*VRGVGV
Trigger: CACCCCCACCCCTCGCACCAAGGCCAAGCTCATCCC...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCACCGCTGCCGTTGAGTTaGGGGGTGCTCTTGCCCGGG +
Preference number: 5 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPAPLPLS*GVLLPG
Trigger: CCCGGGCAAGAGCACCCCCAAACTCAACGGCAGCGG...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS CCA 90 bp GCCATTCACCTGCTCATACCAGTCCCGGTTGGTACAGGTGCACTCTaGCCACCAGCTGGGGCCGCTGCCGTTGAGTTTGGGGGTGCTCTT +
Preference number: 5 (lower is better)
Translates to: AIHLLIPVPVGTGAL*PPAGAAAVEFGGAL
Trigger: AAGAGCACCCCCAAACTCAACGGCAGCGGCCCCAGCTGGTGGCCAGAGTGCACCTGTACCAACCGGGACTGGTATGAGCAGGTGAATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374360.8
ENST00000463252.5
CDS-3UTR CAA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTGGGATGAGCTTGGCCTaGGTGCGAGGGGTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPGMSLA*VRGVGV
Trigger: CACCCCCACCCCTCGCACCAAGGCCAAGCTCATCCC...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCTGGGGCCGCTGCCGTaGAGTTTGGGGGTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRLGPLP*SLGVLL
Trigger: CAAGAGCACCCCCAAACTCAACGGCAGCGGCCCCAG...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCGTAAGGGTCGGGGACTaGCCAGTCGCCGTAGCCCGG +
Preference number: 5 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCVRVGD*PVAVAR
Trigger: CCGGGCTACGGCGACTGGCAAGTCCCCGACCCTTAC...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCCGGTGGGGATGAGCTaGGCCTTGGTGCGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHPVGMS*ALVRGV
Trigger: CACCCCTCGCACCAAGGCCAAGCTCATCCCCACCGG...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTAGTTTGGGGGTGCTCTaGCCCGGGACTGGCTTAGGA +
Preference number: 5 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSSLGVL*PGTGLG
Trigger: TCCTAAGCCAGTCCCGGGCAAGAGCACCCCCAAACT...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCCCGCTGCCGTTGAGTTaGGGGGTGCTCTTGCCCGGG +
Preference number: 5 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLPLPLS*GVLLPG
Trigger: CCCGGGCAAGAGCACCCCCAAACTCAACGGCAGCGG...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGGACTCCCTGTCCCTGTaGGTGGAACCCAGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: PASSLQYGGEGGTLASKEDSLSL*VEPRKE
Trigger: TTCCTTCCTGGGTTCCACCAACAGGGACAGGGAGTC...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTGGCGAGGGAGGCACGTaGGCTTCAAAGGAGCACAGT +
Preference number: 5 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSGEGGT*ASKEHS
Trigger: ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCC...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGACTCCTCCGCACAAGTaGCAATGGCACCTGCCACGT +
Preference number: 5 (lower is better)
Translates to: PASSLQYGGEGGTLASKETPPHK*QWHLPR
Trigger: ACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGT...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS GCA 90 bp AGGCCCAGCGGCAAAGAAGAAGCGGGAGCTCAAGCAGAGAATGGGTaGTGTGAGGACCGCTTCTGCTCTGGTCCCCAGGATGGATCTGAG +
Preference number: 5 (lower is better)
Translates to: RPSGKEEAGAQAENG*CEDRFCSGPQDGSE
Trigger: CTCAGATCCATCCTGGGGACCAGAGCAGAAGCGGTCCTCACAGCACCCATTCTCTGCTTGAGCTCCCGCTTCTTCTTTGCCGCTGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374360.8
CDS-3UTR CAA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTTCCTGCAGATTGGTGTaGTTCACCGCCAGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSSCRLV*FTASSR
Trigger: CCGGCTGCTGGCGGTGAACAACACCAATCTGCAGGA...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTGGCGAGGGAGGCACGTaGGCTTCAAAGGAGCACAGT +
Preference number: 5 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSGEGGT*ASKEHS
Trigger: ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCC...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTAGTTTGGGGGTGCTCTaGCCCGGGACTGGCTTAGGA +
Preference number: 5 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLSLGVL*PGTGLG
Trigger: TCCTAAGCCAGTCCCGGGCAAGAGCACCCCCAAACT...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp CCTGCGTCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGTTGTGCAGGATGATCTaGCGAGGCTCTCTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: PASSLQYGGEGGTLASKELCRMI*RGSLVK
Trigger: CTTCACCAGAGAGCCTCGCAAGATCATCCTGCACAA...CTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGACGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGGTGGGGTCACCAGCCTaGCCTGCCACCACTCATCAT +
Preference number: 5 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRVGSPA*PATTHH
Trigger: ATGATGAGTGGTGGCAGGCAAGGCTGGTGACCCCAC...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTGTGGGGTCACCAGCCTaGCCTGCCACCACTCATCAT +
Preference number: 5 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLVGSPA*PATTHH
Trigger: ATGATGAGTGGTGGCAGGCAAGGCTGGTGACCCCAC...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTCCGGAGCCCGAGAACTaGCGGGCCCTCTCCATAGCT +
Preference number: 5 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTPEPEN*RALSIA
Trigger: AGCTATGGAGAGGGCCCGCAAGTTCTCGGGCTCCGG...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374355.7
CDS-3UTR CAA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTGGCCCTTTGAGCAGGTaGACCTCCATGATGGTCTCG +
Preference number: 5 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLGPLSR*TSMMVS
Trigger: CGAGACCATCATGGAGGTCAACCTGCTCAAAGGGCC...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGAGGCCTTTGGGCCCTTaGAGCAGGTTGACCTCCATG +
Preference number: 5 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRRPLGP*SRLTSM
Trigger: CATGGAGGTCAACCTGCTCAAAGGGCCCAAAGGCCT...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp GGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGTCACCACCCCCTCACATCCTGCAGATaGGTGTTGTTCACCGCCAGC +
Preference number: 5 (lower is better)
Translates to: GWGGRPSTQLSQRACHHPLTSCR*VLFTAS
Trigger: GCTGGCGGTGAACAACACCAATCTGCAGGATGTGAG...GGGGTGGTGACAGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTGGAGCGTACATGTCGTaGAGGTGGAGGCTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTGAYMS*RWRLPG
Trigger: GCCAGGCAGCCTCCACCTCAACGACATGTACGCTCC...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCAGGACCTCTTTTCACTaGTTCGGAGGGACCCAGACC +
Preference number: 5 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALRTSFH*FGGTQT
Trigger: GGTCTGGGTCCCTCCGAACAAGTGAAAAGAGGTCCT...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTTCTAAGATGCAGTGCTaGCCCCTCTCTGCAACTGCC +
Preference number: 5 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSSKMQC*PLSATA
Trigger: GGCAGTTGCAGAGAGGGGCAAGCACTGCATCTTAGA...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCGTTCTTCCCACTGCTTaGCCCACGCCCTCCCTTCTC +
Preference number: 5 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCVLPTA*PTPSLL
Trigger: GAGAAGGGAGGGCGTGGGCAAAGCAGTGGGAAGAAC...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCGTTCTTCCCACTGCTTaGCCCACGCCCTCCCTTCTC +
Preference number: 5 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLVLPTA*PTPSLL
Trigger: GAGAAGGGAGGGCGTGGGCAAAGCAGTGGGAAGAAC...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp GGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGTCACCACCCCCTGGCCCCCAAAAGTTaGGGATGTTCTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: GWGGRPSTQLSQRACHHPLAPKS*GCSSHC
Trigger: GCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAG...GGGGTGGTGACAGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTACTCCTCCGCACAAGTaGCAATGGCACCTGCCACGT +
Preference number: 5 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPTPPHK*QWHLPR
Trigger: ACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGT...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTAGGGTGTGTCTCCCTTaGGGGTTTCCAAGTTGCTCT +
Preference number: 5 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSRVCLP*GFPSCS
Trigger: AGAGCAACTTGGAAACCCCAAAGGGAGACACACCCT...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCTTGTGCAGGATGATCTaGCGAGGCTCTCTGGCATCC +
Preference number: 5 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRLCRMI*RGSLAS
Trigger: GGATGCCAGAGAGCCTCGCAAGATCATCCTGCACAA...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374355.7
CDS-3UTR CAA 90 bp GGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGTCACCACCCCTCGCTGTCACTGGTGTaGGATGTCACTCCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: GWGGRPSTQLSQRACHHPSLSLV*DVTPCS
Trigger: GGAACAGGGAGTGACATCCAACACCAGTGACAGCGA...GGGGTGGTGACAGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374355.7
ENST00000542398.1
CDS-3UTR CAA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTAAGCCCAGGCCAGAGTaGCCCCTCTCAAGTACGATT +
Preference number: 5 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPKPRPE*PLSSTI
Trigger: AATCGTACTTGAGAGGGGCAACTCTGGCCTGGGCTT...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTTCAGGGACATGGGGATaGTCGATGCCACCTGCGATA +
Preference number: 5 (lower is better)
Translates to: LPRESRCPFLILILGPMLSGTWG*SMPPAI
Trigger: TATCGCAGGTGGCATCGACAATCCCCATGTCCCTGA...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCGGCCCTTTGAGCAGGTaGACCTCCATGATGGTCTCG +
Preference number: 5 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLGPLSR*TSMMVS
Trigger: CGAGACCATCATGGAGGTCAACCTGCTCAAAGGGCC...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCAGGCCTTTGGGCCCTTaGAGCAGGTTGACCTCCATG +
Preference number: 5 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCRPLGP*SRLTSM
Trigger: CATGGAGGTCAACCTGCTCAAAGGGCCCAAAGGCCT...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCATTGTGCAGGATGATCTaGCGAGGCTCTCTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPALCRMI*RGSLVK
Trigger: CTTCACCAGAGAGCCTCGCAAGATCATCCTGCACAA...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATTCTAAGATGCAGTGCTaGCCCCTCTCTGCAACTGCC +
Preference number: 5 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENSKMQC*PLSATA
Trigger: GGCAGTTGCAGAGAGGGGCAAGCACTGCATCTTAGA...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCTTTGCCTTCAAGCCATaGTACTGCCCAGGGAAAGCC +
Preference number: 5 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRFAFKP*YCPGKA
Trigger: GGCTTTCCCTGGGCAGTACAATGGCTTGAAGGCAAA...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATACTCCTCCGCACAAGTaGCAATGGCACCTGCCACGT +
Preference number: 5 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHTPPHK*QWHLPR
Trigger: ACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGT...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS TCA 90 bp GTGACTGACTGGCCGGCCCGTTTCAGAGCAGCTGCAGCCTGCTCATaGGTTGCATTCCTCAGATTCACTCCATTCACCGATAAGATCCGG +
Preference number: 5 (lower is better)
Translates to: VTDWPARFRAAAACS*VAFLRFTPFTDKIR
Trigger: CCGGATCTTATCGGTGAATGGAGTGAATCTGAGGAATGCAACTCATGAGCAGGCTGCAGCTGCTCTGAAACGGGCCGGCCAGTCAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000463252.5
CDS TCA 90 bp AGAGTCCCGCCAGCCCCACCGGCTGAACTGCTTTCTTCTCTAATTTaGAATGGTTGCAGCAGAGCGGGCTGCAACTATCTCAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: RVPPAPPAELLSSLI*NGCSRAGCNYLRAG
Trigger: TCCTGCCCTGAGATAGTTGCAGCCCGCTCTGCTGCAACCATTTCAAATTAGAGAAGAAAGCAGTTCAGCCGGTGGGGCTGGCGGGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374355.7
CDS CCA 90 bp CCTGCAGATTGGTGTTGTTCACCTAGAAGAGGAGAGGCCTCAGGCTaGGACTTGGAAGAAGGAGAGGCTTCTCCAGGGAACTCGAGGGAT +
Preference number: 5 (lower is better)
Translates to: PADWCCSPRRGEASG*DLEEGEASPGNSRD
Trigger: ATCCCTCGAGTTCCCTGGAGAAGCCTCTCCTTCTTCCAAGTCCCAGCCTGAGGCCTCTCCTCTTCTAGGTGAACAACACCAATCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463252.5
CDS-3UTR CAA 90 bp CAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTTGCTACCATCTTCACTGGGGCCGCTGCCGTaGAGTTTGGGGGTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: QENDQMRVPLVQHLLPSSLGPLP*SLGVLL
Trigger: CAAGAGCACCCCCAAACTCAACGGCAGCGGCCCCAG...TGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTCAGGCCTCTCCCACCTaGTGTACCTCTTGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLQASPT*CTSWEN
Trigger: ATTTTCCCAAGAGGTACACAAGGTGGGAGAGGCCTG...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTCAGGCCTCTCCCACCTaGTGTACCTCTTGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPQASPT*CTSWEN
Trigger: ATTTTCCCAAGAGGTACACAAGGTGGGAGAGGCCTG...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp GGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGTCACCACCCCTTTGGGGACTCCCTTTaGTTAGGCTGCCTTCAAGCA +
Preference number: 5 (lower is better)
Translates to: GWGGRPSTQLSQRACHHPFGDSL*LGCLQA
Trigger: TGCTTGAAGGCAGCCTAACAAAAGGGAGTCCCCAAA...GGGGTGGTGACAGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTTTTGGGGACTCCCTTTaGTTAGGCTGCCTTCAAGCA +
Preference number: 5 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSFGDSL*LGCLQA
Trigger: TGCTTGAAGGCAGCCTAACAAAAGGGAGTCCCCAAA...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATAGGGTGTGTCTCCCTTaGGGGTTTCCAAGTTGCTCT +
Preference number: 5 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENRVCLP*GFPSCS
Trigger: AGAGCAACTTGGAAACCCCAAAGGGAGACACACCCT...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS TCA 90 bp ATTCAAAGCGACTGTATTCTTCAGGTCTGTACTGGGCCACAATGGTaGCTGACTGGCCGGCCCGTTTCAGAGCAGCTGCAGCCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: IQSDCILQVCTGPQW*LTGRPVSEQLQPAH
Trigger: ATGAGCAGGCTGCAGCTGCTCTGAAACGGGCCGGCCAGTCAGTCACCATTGTGGCCCAGTACAGACCTGAAGAATACAGTCGCTTTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000463252.5
CDS GCA 90 bp TACACCATATCAGATGTGTTCTTCAGTGAGGCCACAGCTTCCTCGTaGCTCACATCCTGCAGATTGGTGTTGTTCACCGCCAGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: YTISDVFFSEATASS*LTSCRLVLFTASSR
Trigger: CCGGCTGCTGGCGGTGAACAACACCAATCTGCAGGATGTGAGGCACGAGGAAGCTGTGGCCTCACTGAAGAACACATCTGATATGGTGTA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCTCATACCAGTCCCGGTaGGTACAGGTGCACTCTGGC +
Preference number: 5 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSSYQSR*VQVHSG
Trigger: GCCAGAGTGCACCTGTACCAACCGGGACTGGTATGA...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTAGGAGCGTACATGTCGTaGAGGTGGAGGCTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLGAYMS*RWRLPG
Trigger: GCCAGGCAGCCTCCACCTCAACGACATGTACGCTCC...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGGTGGGGTCACCAGCCTaGCCTGCCACCACTCATCAT +
Preference number: 5 (lower is better)
Translates to: NNGSDGFCTCASAWERSMVGSPA*PATTHH
Trigger: ATGATGAGTGGTGGCAGGCAAGGCTGGTGACCCCAC...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATGCATCCTCTTGTCCTTaGGAACTGCTTTCGCTGTCA +
Preference number: 5 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENASSCP*ELLSLS
Trigger: TGACAGCGAAAGCAGTTCCAAAGGACAAGAGGATGC...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000542398.1
CDS-3UTR CAA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTGAGATCAGGTCATCATaGACTCGGTCCTTCATTGGG +
Preference number: 5 (lower is better)
Translates to: LPRESRCPFLILILGPMLEIRSS*TRSFIG
Trigger: CCCAATGAAGGACCGAGTCAATGATGACCTGATCTC...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTGCTTGCTGCAGTCTCTaGATAGCATTGCCGGAAACA +
Preference number: 5 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLACCSL*IALPET
Trigger: TGTTTCCGGCAATGCTATCAAGAGACTGCAGCAAGC...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp AGGCCCCTGCTTTCTCTAACACACACCTCTGCTACAGCAGGCCTCTCCCACCTTGCTTGCTGCAGTCTCTaGATAGCATTGCCGGAAACA +
Preference number: 5 (lower is better)
Translates to: RPLLSLTHTSATAGLSHLACCSL*IALPET
Trigger: TGTTTCCGGCAATGCTATCAAGAGACTGCAGCAAGC...AAGGTGGGAGAGGCCTGCTGTAGCAGAGGTGTGTGTTAGAGAAAGCAGGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCTCAATGGACTTGGGCTaGATGAAAATGGCAATGGGG +
Preference number: 5 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRSMDLG*MKMAMG
Trigger: CCCCATTGCCATTTTCATCAAGCCCAAGTCCATTGA...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTTCAATGGACTTGGGCTaGATGAAAATGGCAATGGGG +
Preference number: 5 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSSMDLG*MKMAMG
Trigger: CCCCATTGCCATTTTCATCAAGCCCAAGTCCATTGA...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp AAACTCATGACGCAGCTGGCCAAGCAAGCCAAGTGCTGTCCCGCCATCCCAGCAAGGGCTTCAATGGACTaGGGCTTGATGAAAATGGCA +
Preference number: 5 (lower is better)
Translates to: KLMTQLAKQAKCCPAIPARASMD*GLMKMA
Trigger: TGCCATTTTCATCAAGCCCAAGTCCATTGAAGCCCT...TGCTGGGATGGCGGGACAGCACTTGGCTTGCTTGGCCAGCTGCGTCATGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTCCCTTAGTGCAGCACTaGCTACCATCTTCAATCCCT +
Preference number: 5 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPPLVQH*LPSSIP
Trigger: AGGGATTGAAGATGGTAGCAAGTGCTGCACTAAGGG...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACAGGCGAGGGAGGCACGTaGGCTTCAAAGGAGCACAGT +
Preference number: 5 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTGEGGT*ASKEHS
Trigger: ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCC...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATGGCGAGGGAGGCACGTaGGCTTCAAAGGAGCACAGT +
Preference number: 5 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHGEGGT*ASKEHS
Trigger: ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCC...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTTTGCCTTCAAGCCATaGTACTGCCCAGGGAAAGCC +
Preference number: 5 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCFAFKP*YCPGKA
Trigger: GGCTTTCCCTGGGCAGTACAATGGCTTGAAGGCAAA...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCCAGGCCTCTCCCACCTaGTGTACCTCTTGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLQASPT*CTSWEN
Trigger: ATTTTCCCAAGAGGTACACAAGGTGGGAGAGGCCTG...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTTTTGGGGACTCCCTTTaGTTAGGCTGCCTTCAAGCA +
Preference number: 5 (lower is better)
Translates to: LPRESRCPFLILILGPMLFGDSL*LGCLQA
Trigger: TGCTTGAAGGCAGCCTAACAAAAGGGAGTCCCCAAA...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAACCAGGCCTGTGTCACCTACTCCATCACAAGGCCTGGCTCCTTCAGGACCTCCCACAGGACAGATCTTaGTTCTCTTTGTCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: QPGLCHLLHHKAWLLQDLPQDRS*FSLSSG
Trigger: TCCTGAGGACAAAGAGAACAAAGATCTGTCCTGTGG...GAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAGTAGGTGACACAGGCCTGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCTTTGGGGTTTCCAAGTaGCTCTGTATCTTCTCGTGC +
Preference number: 5 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALFGVSK*LCIFSC
Trigger: GCACGAGAAGATACAGAGCAACTTGGAAACCCCAAA...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp GAGCCCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCTTTGGGGTTTCCAAGTaGCTCTGTATCTTCTCGTGC +
Preference number: 5 (lower is better)
Translates to: EPSGPQKFGMFFPLLCPRFGVSK*LCIFSC
Trigger: GCACGAGAAGATACAGAGCAACTTGGAAACCCCAAA...GCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TCGTCCCTCCAGTATGGAGGCGAGGGAGGCACGTTGGCTTCAAAGGAGCACAGTTTTGGGGTTTCCAAGTaGCTCTGTATCTTCTCGTGC +
Preference number: 5 (lower is better)
Translates to: SSLQYGGEGGTLASKEHSFGVSK*LCIFSC
Trigger: GCACGAGAAGATACAGAGCAACTTGGAAACCCCAAA...ACTGTGCTCCTTTGAAGCCAACGTGCCTCCCTCGCCTCCATACTGGAGGGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATAGGGTGTGTCTCCCTTaGGGGTTTCCAAGTTGCTCT +
Preference number: 5 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHRVCLP*GFPSCS
Trigger: AGAGCAACTTGGAAACCCCAAAGGGAGACACACCCT...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGTCCTGCAGATTGGTGTaGTTCACCGCCAGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKSCRLV*FTASSR
Trigger: CCGGCTGCTGGCGGTGAACAACACCAATCTGCAGGA...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp CAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTTGCTACCATCTTCAGTGGGGTCACCAGCCTaGCCTGCCACCACTCATCAT +
Preference number: 5 (lower is better)
Translates to: QENDQMRVPLVQHLLPSSVGSPA*PATTHH
Trigger: ATGATGAGTGGTGGCAGGCAAGGCTGGTGACCCCAC...TGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCCTCCCTTCAGGTTCTTaGCTCCATAATAATCGTCAC +
Preference number: 5 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALLPSGS*LHNNRH
Trigger: GTGACGATTATTATGGAGCAAAGAACCTGAAGGGAG...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000194900.8
CDS-3UTR CAA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCGAGATCAGGTCATCATaGACTCGGTCCTTCATTGGG +
Preference number: 5 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLEIRSS*TRSFIG
Trigger: CCCAATGAAGGACCGAGTCAATGATGACCTGATCTC...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp GCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCTCGCTTGCTGCAGTCTCTaGATAGCATTGCCGGAAACA +
Preference number: 5 (lower is better)
Translates to: AQHGSVKGVSPFGVSKLLACCSL*IALPET
Trigger: TGTTTCCGGCAATGCTATCAAGAGACTGCAGCAAGC...GAGCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATGCTTGCTGCAGTCTCTaGATAGCATTGCCGGAAACA +
Preference number: 5 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHACCSL*IALPET
Trigger: TGTTTCCGGCAATGCTATCAAGAGACTGCAGCAAGC...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTTCAATGGACTTGGGCTaGATGAAAATGGCAATGGGG +
Preference number: 5 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLSMDLG*MKMAMG
Trigger: CCCCATTGCCATTTTCATCAAGCCCAAGTCCATTGA...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTAGGGCTTCAATGGACTaGGGCTTGATGAAAATGGCA +
Preference number: 5 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPRASMD*GLMKMA
Trigger: TGCCATTTTCATCAAGCCCAAGTCCATTGAAGCCCT...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTAGGGCTTCAATGGACTaGGGCTTGATGAAAATGGCA +
Preference number: 5 (lower is better)
Translates to: LPRESRCPFLILILGPMLRASMD*GLMKMA
Trigger: TGCCATTTTCATCAAGCCCAAGTCCATTGAAGCCCT...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGCCCTTAGTGCAGCACTaGCTACCATCTTCAATCCCT +
Preference number: 5 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGPLVQH*LPSSIP
Trigger: AGGGATTGAAGATGGTAGCAAGTGCTGCACTAAGGG...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATGACTCCCTGTCCCTGTaGGTGGAACCCAGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHDSLSL*VEPRKE
Trigger: TTCCTTCCTGGGTTCCACCAACAGGGACAGGGAGTC...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTTGCTACCATCTTCAGTTCTTCCCACTGCTTaGCCCACGCCCTCCCTTCTC +
Preference number: 5 (lower is better)
Translates to: QENDQMRVPLVQHLLPSSVLPTA*PTPSLL
Trigger: GAGAAGGGAGGGCGTGGGCAAAGCAGTGGGAAGAAC...TGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGGTTCTTCCCACTGCTTaGCCCACGCCCTCCCTTCTC +
Preference number: 5 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKVLPTA*PTPSLL
Trigger: GAGAAGGGAGGGCGTGGGCAAAGCAGTGGGAAGAAC...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCCTGGCCCCCAAAAGTTaGGGATGTTCTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVLAPKS*GCSSHC
Trigger: GCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAG...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGACTCCTCCGCACAAGTaGCAATGGCACCTGCCACGT +
Preference number: 5 (lower is better)
Translates to: NNGSDGFCTCASAWERSMTPPHK*QWHLPR
Trigger: ACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGT...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTCCACAGGACAGATCTTaGTTCTCTTTGTCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPPQDRS*FSLSSG
Trigger: TCCTGAGGACAAAGAGAACAAAGATCTGTCCTGTGG...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAGCAGCTGCTTTCAGGTCAAGTCTCTCACCCTCTCACCCCAGGCAAAAGCCCTTCTAATTTGAAATGGTaGCAGCAGAGCGGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: QQLLSGQVSHPLTPGKSPSNLKW*QQSGLQ
Trigger: TTGCAGCCCGCTCTGCTGCAACCATTTCAAATTAGA...AGGGCTTTTGCCTGGGGTGAGAGGGTGAGAGACTTGACCTGAAAGCAGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374355.7
CDS-3UTR CAA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTCAAAATAGCATCCTCTaGTCCTTTCAGGTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSQNSIL*SFQVLC
Trigger: GCAAAGAACCTGAAAGGACAAGAGGATGCTATTTTG...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374360.8
CDS TCA 90 bp AGCCCAGGCCAGAGTTGCCCCTCTCAAGTACGATTTCCTCATATTTaGACATGCCATCACTGCCATTCACCTGCTCATACCAGTCCCGGT +
Preference number: 5 (lower is better)
Translates to: SPGQSCPSQVRFPHI*TCHHCHSPAHTSPG
Trigger: ACCGGGACTGGTATGAGCAGGTGAATGGCAGTGATGGCATGTTCAAATATGAGGAAATCGTACTTGAGAGGGGCAACTCTGGCCTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374360.8
ENST00000463252.5
CDS-3UTR CAA 90 bp CAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTTGCTACCATCTTCATCATACCAGTCCCGGTaGGTACAGGTGCACTCTGGC +
Preference number: 5 (lower is better)
Translates to: QENDQMRVPLVQHLLPSSSYQSR*VQVHSG
Trigger: GCCAGAGTGCACCTGTACCAACCGGGACTGGTATGA...TGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGAGGACCTCTTTTCACTaGTTCGGAGGGACCCAGACC +
Preference number: 5 (lower is better)
Translates to: NNGSDGFCTCASAWERSMRTSFH*FGGTQT
Trigger: GGTCTGGGTCCCTCCGAACAAGTGAAAAGAGGTCCT...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACAAGGACCTCTTTTCACTaGTTCGGAGGGACCCAGACC +
Preference number: 5 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTRTSFH*FGGTQT
Trigger: GGTCTGGGTCCCTCCGAACAAGTGAAAAGAGGTCCT...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGAGGACCTCTTTTCACTaGTTCGGAGGGACCCAGACC +
Preference number: 5 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQRTSFH*FGGTQT
Trigger: GGTCTGGGTCCCTCCGAACAAGTGAAAAGAGGTCCT...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGTCGCTGTCACTGGTGTaGGATGTCACTCCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: NNGSDGFCTCASAWERSMSLSLV*DVTPFR
Trigger: CCTGAAGGGAGTGACATCCAACACCAGTGACAGCGA...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194900.8
CDS-3UTR CAA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGTGCATAGTGAATTTCTaGCCGTGTCACTGGCTCATA +
Preference number: 5 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRCIVNF*PCHWLI
Trigger: TATGAGCCAGTGACACGGCAAGAAATTCACTATGCA...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTGAGGTTATCATTAAATaGGCCCGCCTCGATGAACTT +
Preference number: 5 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLEVIIK*ARLDEL
Trigger: AAGTTCATCGAGGCGGGCCAATTTAATGATAACCTC...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp GCAGTGTCTGGGGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGAGGTTATCATTAAATaGGCCCGCCTCGATGAACTT +
Preference number: 5 (lower is better)
Translates to: AVSGAGVEDQAHNFHKGPEVIIK*ARLDEL
Trigger: AAGTTCATCGAGGCGGGCCAATTTAATGATAACCTC...AGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCCCCAGACACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CCTCTGGCCCCCAAAAGTTTGGGATGTTCTTCCCACTGCTTTGCCCACGCCCTCAGTCTCTTGATAGCATaGCCGGAAACATCTAAGATG +
Preference number: 5 (lower is better)
Translates to: PLAPKSLGCSSHCFAHALSLLIA*PETSKM
Trigger: CATCTTAGATGTTTCCGGCAATGCTATCAAGAGACT...GAGGGCGTGGGCAAAGCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAACCAGGCCTGTGTCACCTACTCCATCACAAGGCCTGGCTCCTTCAGGACCTCAGTCTCTTGATAGCATaGCCGGAAACATCTAAGATG +
Preference number: 5 (lower is better)
Translates to: QPGLCHLLHHKAWLLQDLSLLIA*PETSKM
Trigger: CATCTTAGATGTTTCCGGCAATGCTATCAAGAGACT...GAGGTCCTGAAGGAGCCAGGCCTTGTGATGGAGTAGGTGACACAGGCCTGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATAGGGCTTCAATGGACTaGGGCTTGATGAAAATGGCA +
Preference number: 5 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHRASMD*GLMKMA
Trigger: TGCCATTTTCATCAAGCCCAAGTCCATTGAAGCCCT...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGAAAGCATCCTCAACATaGCCTCGCTTGCACCAGCCC +
Preference number: 5 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQKASST*PRLHQP
Trigger: GGGCTGGTGCAAGCGAGGCAATGTTGAGGATGCTTT...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGCCACAGGACAGATCTTaGTTCTCTTTGTCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGPQDRS*FSLSSG
Trigger: TCCTGAGGACAAAGAGAACAAAGATCTGTCCTGTGG...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCAGGGTGTGTCTCCCTTaGGGGTTTCCAAGTTGCTCT +
Preference number: 5 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVRVCLP*GFPSCS
Trigger: AGAGCAACTTGGAAACCCCAAAGGGAGACACACCCT...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATCAGGGACATGGGGATaGTCGATGCCACCTGCGATA +
Preference number: 5 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLSGTWG*SMPPAI
Trigger: TATCGCAGGTGGCATCGACAATCCCCATGTCCCTGA...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACACTGAAACCCAGGCCTTaGGGCCCTTTGAGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: VKIPLITVTAIRLWEKATLKPRP*GPLSRL
Trigger: CAACCTGCTCAAAGGGCCCAAAGGCCTGGGTTTCAG...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTCAAAATAGCATCCTCTaGTCCTTTGGAACTGCTTTC +
Preference number: 5 (lower is better)
Translates to: LPRESRCPFLILILGPMLQNSIL*SFGTAF
Trigger: GAAAGCAGTTCCAAAGGACAAGAGGATGCTATTTTG...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000542398.1
CDS-3UTR CAA 90 bp CAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTTGCTACCATCTTCATCTAAGATGCAGTGCTaGCCCCTCTCTGCAACTGCC +
Preference number: 5 (lower is better)
Translates to: QENDQMRVPLVQHLLPSSSKMQC*PLSATA
Trigger: GGCAGTTGCAGAGAGGGGCAAGCACTGCATCTTAGA...TGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TGTTTCTCTTCCCTGGGAGGGGGAGGGCTGAGCACGGTTGAGACTTTGCCACTTAGTCTCTTGATAGCATaGCCGGAAACATCTAAGATG +
Preference number: 5 (lower is better)
Translates to: CFSSLGGGGLSTVETLPLSLLIA*PETSKM
Trigger: CATCTTAGATGTTTCCGGCAATGCTATCAAGAGACT...AAGTGGCAAAGTCTCAACCGTGCTCAGCCCTCCCCCTCCCAGGGAAGAGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGTCTGTCGCCATTACGTaGCACCGTTCAGAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: NNGSDGFCTCASAWERSMSVAIT*HRSELQ
Trigger: TTGCAGCTCTGAACGGTGCAACGTAATGGCGACAGA...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACAGCGGTGAAGATTCCCTaGATCACAGTCACTGCCATC +
Preference number: 5 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTAVKIP*ITVTAI
Trigger: GATGGCAGTGACTGTGATCAAGGGAATCTTCACCGC...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATGCGGTGAAGATTCCCTaGATCACAGTCACTGCCATC +
Preference number: 5 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHAVKIP*ITVTAI
Trigger: GATGGCAGTGACTGTGATCAAGGGAATCTTCACCGC...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGAAAGCATCCTCAACATaGCCTCGCTTGCACCAGCCC +
Preference number: 5 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKKASST*PRLHQP
Trigger: GGGCTGGTGCAAGCGAGGCAATGTTGAGGATGCTTT...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGTTTGCCTTCAAGCCATaGTACTGCCCAGGGAAAGCC +
Preference number: 5 (lower is better)
Translates to: NNGSDGFCTCASAWERSMFAFKP*YCPGKA
Trigger: GGCTTTCCCTGGGCAGTACAATGGCTTGAAGGCAAA...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp GGCTGGGGTGGAAGACCAAGCACACAACTTTCACAAAGGGCCTGTCACCACCCCTCACTTTATCCCTTTTaGCCTTCAAGCCATTGTACT +
Preference number: 5 (lower is better)
Translates to: GWGGRPSTQLSQRACHHPSLYPF*PSSHCT
Trigger: AGTACAATGGCTTGAAGGCAAAAAGGGATAAAGTGA...GGGGTGGTGACAGGCCCTTTGTGAAAGTTGTGTGCTTGGTCTTCCACCCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp GAAAATGTCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTACTGGCCCCCAAAAGTTaGGGATGTTCTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: ENVSILPPQMWTPIWLVLLAPKS*GCSSHC
Trigger: GCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAG...TAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGACATTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCTGGACTCCCATCTGGTaGGTGCTATTTGAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSWTPIW*VLFEAV
Trigger: CACTGCTTCAAATAGCACCAACCAGATGGGAGTCCA...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CCTGTTGGTGGAACCCAGGAAGGAACCTCAGCAGAGCCCTCCGTGTCCTCCTCTAGATCTTTGTTCTCTTaGTCCTCAGGAGATGAATTT +
Preference number: 5 (lower is better)
Translates to: PVGGTQEGTSAEPSVSSSRSLFS*SSGDEF
Trigger: AAATTCATCTCCTGAGGACAAAGAGAACAAAGATCT...AGAGGAGGACACGGAGGGCTCTGCTGAGGTTCCTTCCTGGGTTCCACCAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGTCGCTGTCACTGGTGTaGGATGTCACTCCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKSLSLV*DVTPCS
Trigger: GGAACAGGGAGTGACATCCAACACCAGTGACAGCGA...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374355.7
ENST00000542398.1
CDS TCA 90 bp GATTCAAAGCGACTGTATTCTCAGACCAACAAGCTCTCTCTCCTGTaGGTTACCTCCCTGCACTTCTGTCCTCGATCAGAAGAGCCTCGT +
Preference number: 5 (lower is better)
Translates to: DSKRLYSQTNKLSLL*VTSLHFCPRSEEPR
Trigger: ACGAGGCTCTTCTGATCGAGGACAGAAGTGCAGGGAGGTAACTCACAGGAGAGAGAGCTTGTTGGTCTGAGAATACAGTCGCTTTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494493.1
CDS-3UTR CAA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACAAAGCCCAGGCCAGAGTaGCCCCTCTCAAGTACGATT +
Preference number: 5 (lower is better)
Translates to: VKIPLITVTAIRLWEKATKPRPE*PLSSTI
Trigger: AATCGTACTTGAGAGGGGCAACTCTGGCCTGGGCTT...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp CACTTCCTAAGACTCCTCCGCACAAGTTGCAATGGCACCTGCCACGTCAGAACTTGCATAGTGAATTTCTaGCCGTGTCACTGGCTCATA +
Preference number: 5 (lower is better)
Translates to: HFLRLLRTSCNGTCHVRTCIVNF*PCHWLI
Trigger: TATGAGCCAGTGACACGGCAAGAAATTCACTATGCA...AGTTCTGACGTGGCAGGTGCCATTGCAACTTGTGCGGAGGAGTCTTAGGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGAGTCTCTTGATAGCATaGCCGGAAACATCTAAGATG +
Preference number: 5 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGSLLIA*PETSKM
Trigger: CATCTTAGATGTTTCCGGCAATGCTATCAAGAGACT...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CACAGAACTGGAAGGCAAGTGACTCCCTGTCCCTGTTGGTGGAACCCAGGAAGGTCACTTTATCCCTTTTaGCCTTCAAGCCATTGTACT +
Preference number: 5 (lower is better)
Translates to: HRTGRQVTPCPCWWNPGRSLYPF*PSSHCT
Trigger: AGTACAATGGCTTGAAGGCAAAAAGGGATAAAGTGA...CCTTCCTGGGTTCCACCAACAGGGACAGGGAGTCACTTGCCTTCCAGTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACATGGACTCCCATCTGGTaGGTGCTATTTGAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTWTPIW*VLFEAV
Trigger: CACTGCTTCAAATAGCACCAACCAGATGGGAGTCCA...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCCCACAGGACAGATCTTaGTTCTCTTTGTCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVPQDRS*FSLSSG
Trigger: TCCTGAGGACAAAGAGAACAAAGATCTGTCCTGTGG...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS CCA 90 bp ATGTGGAAATTCGGAGATCAGGTCATCATTGACTCGGTCCTTCATTaGGCCCAGGATGATCACAGGCCTTGCATAGTGAATTTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: MWKFGDQVIIDSVLH*AQDDHRPCIVNFLP
Trigger: CGGCAAGAAATTCACTATGCAAGGCCTGTGATCATCCTGGGCCCAATGAAGGACCGAGTCAATGATGACCTGATCTCCGAATTTCCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000461646.1
ENST00000463252.5
ENST00000466140.5
ENST00000542398.1
CDS-3UTR CAA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGGCATCCTCTTGTCCTTaGGAACTGCTTTCGCTGTCA +
Preference number: 5 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKASSCP*ELLSLS
Trigger: TGACAGCGAAAGCAGTTCCAAAGGACAAGAGGATGC...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000542398.1
CDS-3UTR CAA 90 bp CAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTTGCTACCATCTTCAGAGATCAGGTCATCATaGACTCGGTCCTTCATTGGG +
Preference number: 5 (lower is better)
Translates to: QENDQMRVPLVQHLLPSSEIRSS*TRSFIG
Trigger: CCCAATGAAGGACCGAGTCAATGATGACCTGATCTC...TGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp GGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCGAGGTTATCATTAAATaGGCCCGCCTCGATGAACTT +
Preference number: 5 (lower is better)
Translates to: GGEDSLDHSHCHQTLGKSEVIIK*ARLDEL
Trigger: AAGTTCATCGAGGCGGGCCAATTTAATGATAACCTC...GCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTTGCTACCATCTTCACCCTTAGTGCAGCACTaGCTACCATCTTCAATCCCT +
Preference number: 5 (lower is better)
Translates to: QENDQMRVPLVQHLLPSSPLVQH*LPSSIP
Trigger: AGGGATTGAAGATGGTAGCAAGTGCTGCACTAAGGG...TGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACAGCGGTGAAGATTCCCTaGATCACAGTCACTGCCATC +
Preference number: 5 (lower is better)
Translates to: VKIPLITVTAIRLWEKATAVKIP*ITVTAI
Trigger: GATGGCAGTGACTGTGATCAAGGGAATCTTCACCGC...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CCTGCTGCCTGCACTTGTGGCGGTGAAGATTCCCTTGATCACAGTCACTGCCATTCACTTTATCCCTTTTaGCCTTCAAGCCATTGTACT +
Preference number: 5 (lower is better)
Translates to: PAACTCGGEDSLDHSHCHSLYPF*PSSHCT
Trigger: AGTACAATGGCTTGAAGGCAAAAAGGGATAAAGTGA...ATGGCAGTGACTGTGATCAAGGGAATCTTCACCGCCACAAGTGCAGGCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCACTGGCCCCCAAAAGTTaGGGATGTTCTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: LQANERMWESKQPAHHKALAPKS*GCSSHC
Trigger: GCAGTGGGAAGAACATCCCAAACTTTTGGGGGCCAG...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTTGCTACCATCTTCATGGACTCCCATCTGGTaGGTGCTATTTGAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: QENDQMRVPLVQHLLPSSWTPIW*VLFEAV
Trigger: CACTGCTTCAAATAGCACCAACCAGATGGGAGTCCA...TGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAAAAGCCCTTCCTCTCCGGCCTCAGGCTGACCCCTCCTAGCTCTCAAGAGAATAGATCTTTGTTCTCTTaGTCCTCAGGAGATGAATTT +
Preference number: 5 (lower is better)
Translates to: QKPFLSGLRLTPPSSQENRSLFS*SSGDEF
Trigger: AAATTCATCTCCTGAGGACAAAGAGAACAAAGATCT...ATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGGCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CTGCCCAGGGAAAGCCGCTGTCCTTTCCTTATCCTCATCCTGGGTCCCATGCTTAGATCTTTGTTCTCTTaGTCCTCAGGAGATGAATTT +
Preference number: 5 (lower is better)
Translates to: LPRESRCPFLILILGPMLRSLFS*SSGDEF
Trigger: AAATTCATCTCCTGAGGACAAAGAGAACAAAGATCT...AAGCATGGGACCCAGGATGAGGATAAGGAAAGGACAGCGGCTTTCCCTGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTTTGGGGTTTCCAAGTaGCTCTGTATCTTCTCGTGC +
Preference number: 5 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQFGVSK*LCIFSC
Trigger: GCACGAGAAGATACAGAGCAACTTGGAAACCCCAAA...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TTAACATCAGAGAATCAACCTCCCTGCTCACCCCTCCTCACCAGAGTCACAGTCCAAAATAGCATCCTCTaGTCCTTTGGAACTGCTTTC +
Preference number: 5 (lower is better)
Translates to: LTSENQPPCSPLLTRVTVQNSIL*SFGTAF
Trigger: GAAAGCAGTTCCAAAGGACAAGAGGATGCTATTTTG...GACTGTGACTCTGGTGAGGAGGGGTGAGCAGGGAGGTTGATTCTCTGATGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000542398.1
CDS-3UTR CAA 90 bp AACAATGGCTCTGATGGATTTTGCACCTGTGCTAGCGCTTGGGAAAGGTCCATGTGCATAGTGAATTTCTaGCCGTGTCACTGGCTCATA +
Preference number: 5 (lower is better)
Translates to: NNGSDGFCTCASAWERSMCIVNF*PCHWLI
Trigger: TATGAGCCAGTGACACGGCAAGAAATTCACTATGCA...CATGGACCTTTCCCAAGCGCTAGCACAGGTGCAAAATCCATCAGAGCCATTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TCTTCTCGTGCTGGGGCTGAATGTTCTTCAGCTGTACCTCCACTAGGAGAACATTGCATAGTGAATTTCTaGCCGTGTCACTGGCTCATA +
Preference number: 5 (lower is better)
Translates to: SSRAGAECSSAVPPLGEHCIVNF*PCHWLI
Trigger: TATGAGCCAGTGACACGGCAAGAAATTCACTATGCA...ATGTTCTCCTAGTGGAGGTACAGCTGAAGAACATTCAGCCCCAGCACGAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACAGAGGTTATCATTAAATaGGCCCGCCTCGATGAACTT +
Preference number: 5 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTEVIIK*ARLDEL
Trigger: AAGTTCATCGAGGCGGGCCAATTTAATGATAACCTC...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAGCACAGCACGGCAGTGTTAAGGGTGTGTCTCCCTTTGGGGTTTCCAAGTTGCAGATCTTTGTTCTCTTaGTCCTCAGGAGATGAATTT +
Preference number: 5 (lower is better)
Translates to: QHSTAVLRVCLPLGFPSCRSLFS*SSGDEF
Trigger: AAATTCATCTCCTGAGGACAAAGAGAACAAAGATCT...GCAACTTGGAAACCCCAAAGGGAGACACACCCTTAACACTGCCGTGCTGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGCAGTGTCTGGGGCTGGGTTTTTACGTTTCGTTTaGATCGACCTGTTAGACTCA +
Preference number: 5 (lower is better)
Translates to: QMWTPIWLVLFEAVSGAGFLRFV*IDLLDS
Trigger: TGAGTCTAACAGGTCGATCAAAACGAAACGTAAAAA...CCCAGCCCCAGACACTGCTTCAAATAGCACCAACCAGATGGGAGTCCACATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374355.7
ENST00000542398.1
CDS GCA 90 bp AGGACCTCTTTTCACTTGTTCGGAGGGACCCAGACCCAGAGCTCATaGTGCTGTTCATCATTTGTTCTCGTAAGTCATGTATCTTCGATT +
Preference number: 5 (lower is better)
Translates to: RTSFHLFGGTQTQSS*CCSSFVLVSHVSSI
Trigger: AATCGAAGATACATGACTTACGAGAACAAATGATGAACAGCAGCATGAGCTCTGGGTCTGGGTCCCTCCGAACAAGTGAAAAGAGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000463252.5
ENST00000466140.5
ENST00000489733.5
ENST00000494493.1
ENST00000542398.1
CDS-3UTR CAA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCAGCATCCTCTTGTCCTTaGGAACTGCTTTCGCTGTCA +
Preference number: 5 (lower is better)
Translates to: LQANERMWESKQPAHHKAASSCP*ELLSLS
Trigger: TGACAGCGAAAGCAGTTCCAAAGGACAAGAGGATGC...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000542398.1
CDS-3UTR CAA 90 bp ACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTGTGACCACAGGACACAAAATAGCATCCTCTaGTCCTTTGGAACTGCTTTC +
Preference number: 5 (lower is better)
Translates to: TRRTSAVKTEPQQCDHRTQNSIL*SFGTAF
Trigger: GAAAGCAGTTCCAAAGGACAAGAGGATGCTATTTTG...TGTCCTGTGGTCACACTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000542398.1
CDS-3UTR CAA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCAGAGATCAGGTCATCATaGACTCGGTCCTTCATTGGG +
Preference number: 5 (lower is better)
Translates to: LQANERMWESKQPAHHKAEIRSS*TRSFIG
Trigger: CCCAATGAAGGACCGAGTCAATGATGACCTGATCTC...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp CTTCAAGCAAATGAGAGAATGTGGGAAAGCAAGCAACCTGCACACCATAAAGCATGGACTCCCATCTGGTaGGTGCTATTTGAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: LQANERMWESKQPAHHKAWTPIW*VLFEAV
Trigger: CACTGCTTCAAATAGCACCAACCAGATGGGAGTCCA...TGCTTTATGGTGTGCAGGTTGCTTGCTTTCCCACATTCTCTCATTTGCTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS-3UTR CAA 90 bp TCAGCATTTTGCCACCACAGATGTGGACTCCCATCTGGTTGGTGCTATTTGAAGACGATTTCCTCATATTaGAACATGCCATCACTGCCA +
Preference number: 5 (lower is better)
Translates to: SAFCHHRCGLPSGWCYLKTISSY*NMPSLP
Trigger: TGGCAGTGATGGCATGTTCAAATATGAGGAAATCGT...CTTCAAATAGCACCAACCAGATGGGAGTCCACATCTGTGGTGGCAAAATGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACAACGATTTCCTCATATTaGAACATGCCATCACTGCCA +
Preference number: 5 (lower is better)
Translates to: VKIPLITVTAIRLWEKATTISSY*NMPSLP
Trigger: TGGCAGTGATGGCATGTTCAAATATGAGGAAATCGT...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS-3UTR CAA 90 bp TTCAGCTGTACCTCCACTAGGAGAACATCAGCTGTGAAGACAGAGCCTCAACAGTTTTTACGTTTCGTTTaGATCGACCTGTTAGACTCA +
Preference number: 5 (lower is better)
Translates to: FSCTSTRRTSAVKTEPQQFLRFV*IDLLDS
Trigger: TGAGTCTAACAGGTCGATCAAAACGAAACGTAAAAA...CTGTTGAGGCTCTGTCTTCACAGCTGATGTTCTCCTAGTGGAGGTACAGCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374355.7
ENST00000542398.1
CDS-3UTR CAA 90 bp GTGAAGATTCCCTTGATCACAGTCACTGCCATCAGACTCTGGGAAAAAGCAACATCACTTTATCCCTTTTaGCCTTCAAGCCATTGTACT +
Preference number: 5 (lower is better)
Translates to: VKIPLITVTAIRLWEKATSLYPF*PSSHCT
Trigger: AGTACAATGGCTTGAAGGCAAAAAGGGATAAAGTGA...TGTTGCTTTTTCCCAGAGTCTGATGGCAGTGACTGTGATCAAGGGAATCTTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000542398.1
CDS CAA 90 bp CGCGCTGGCGCCGTTGCCCCCACCTGGCCCGTAAGGGTCGGGGACTaGCCAGTCGCCGTAGCCCGGAGGCTCGAGGCGCCGCAGGGCGGC +
Preference number: 6 (lower is better)
Translates to: RAGAVAPTWPVRVGD*PVAVARRLEAPQGG
Trigger: GCCGCCCTGCGGCGCCTCGAGCCTCCGGGCTACGGCGACTGGCAAGTCCCCGACCCTTACGGGCCAGGTGGGGGCAACGGCGCCAGCGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374360.8
ENST00000463252.5
CDS CAA 72 bp GCCGTTGCCCCCACCTGGCCCGTAAGGGTCGGGGACTaGCCAGTCGCCGTAGCCCGGAGGCTCGAGGCGCCG +
Preference number: 6 (lower is better)
Translates to: AVAPTWPVRVGD*PVAVARRLEAP
Trigger: CGGCGCCTCGAGCCTCCGGGCTACGGCGACTGGCAAGTCCCCGACCCTTACGGGCCAGGTGGGGGCAACGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374360.8
ENST00000463252.5
CDS GCA 72 bp CCCCTGGCTGCCTACCCTTCCGGCTCCACTGCTGCCTaGCCGCCAGCCTCTCGGGCCCCACCCTGCAAACCT +
Preference number: 6 (lower is better)
Translates to: PLAAYPSGSTAA*PPASRAPPCKP
Trigger: AGGTTTGCAGGGTGGGGCCCGAGAGGCTGGCGGGCAGGCAGCAGTGGAGCCGGAAGGGTAGGCAGCCAGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374355.7
CDS CCA 72 bp CAGCACTGGCGGCTCCGTGTCGCCCGTCGTGGCTTCTaGGCCGAGGCCCAGCGGCAAAGAAGAAGCGGGAGC +
Preference number: 6 (lower is better)
Translates to: QHWRLRVARRGF*AEAQRQRRSGS
Trigger: GCTCCCGCTTCTTCTTTGCCGCTGGGCCTCGGCCCAGAAGCCACGACGGGCGACACGGAGCCGCCAGTGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS CAA 90 bp GTACAGGTGCACTCTGGCCACCAGCTGGGGCCGCTGCCGTTGAGTTaGGGGGTGCTCTTGCCCGGGACTGGCTTAGGAGGCACCGGCCCC +
Preference number: 6 (lower is better)
Translates to: VQVHSGHQLGPLPLS*GVLLPGTGLGGTGP
Trigger: GGGGCCGGTGCCTCCTAAGCCAGTCCCGGGCAAGAGCACCCCCAAACTCAACGGCAGCGGCCCCAGCTGGTGGCCAGAGTGCACCTGTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374360.8
ENST00000463252.5
CDS CAA 90 bp GCGGAGGCGGAGCCCAAGCCCATGGCCAAGCCGGAGCCCGAGAACTaGCGGGCCCTCTCCATAGCTCCTCTCTCTCTCCCCTGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: AEAEPKPMAKPEPEN*RALSIAPLSLPWLP
Trigger: AGGCAGCCAGGGGAGAGAGAGAGGAGCTATGGAGAGGGCCCGCAAGTTCTCGGGCTCCGGCTTGGCCATGGGCTTGGGCTCCGCCTCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374355.7
CDS GCA 72 bp CTGTCGCCTCCGCACCACCAATCGCACCACAGGGCCTaGCTCCTTCAGCGCCTCCACCGCCCGGCTGTGTAC +
Preference number: 6 (lower is better)
Translates to: LSPPHHQSHHRA*LLQRLHRPAVY
Trigger: GTACACAGCCGGGCGGTGGAGGCGCTGAAGGAGGCAGGCCCTGTGGTGCGATTGGTGGTGCGGAGGCGACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374360.8
ENST00000463252.5
CDS CCA 72 bp GCTGCCGTTGAGTTTGGGGGTGCTCTTGCCCGGGACTaGCTTAGGAGGCACCGGCCCCACATCCCGGCCGGT +
Preference number: 6 (lower is better)
Translates to: AAVEFGGALARD*LRRHRPHIPAG
Trigger: ACCGGCCGGGATGTGGGGCCGGTGCCTCCTAAGCCAGTCCCGGGCAAGAGCACCCCCAAACTCAACGGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374360.8
ENST00000463252.5
CDS CCA 72 bp GGGGTGCAGGCCTGGCCTGCTCATACCAGTCCCGGTTaGTACAGGTGCACTCTGGCCACCAGCTGGGGCCGC +
Preference number: 6 (lower is better)
Translates to: GVQAWPAHTSPG*YRCTLATSWGR
Trigger: GCGGCCCCAGCTGGTGGCCAGAGTGCACCTGTACCAACCGGGACTGGTATGAGCAGGCCAGGCCTGCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000194900.8
CDS CAA 72 bp AGGGGTGCAGGCCTGGCCTGCTCATACCAGTCCCGGTaGGTACAGGTGCACTCTGGCCACCAGCTGGGGCCG +
Preference number: 6 (lower is better)
Translates to: RGAGLACSYQSR*VQVHSGHQLGP
Trigger: CGGCCCCAGCTGGTGGCCAGAGTGCACCTGTACCAACCGGGACTGGTATGAGCAGGCCAGGCCTGCACCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000194900.8
CDS CAA 90 bp CGGTTGGTACAGGTGCACTCTGGCCACCAGCTGGGGCCGCTGCCGTaGAGTTTGGGGGTGCTCTTGCCCGGGACTGGCTTAGGAGGCACC +
Preference number: 6 (lower is better)
Translates to: RLVQVHSGHQLGPLP*SLGVLLPGTGLGGT
Trigger: GGTGCCTCCTAAGCCAGTCCCGGGCAAGAGCACCCCCAAACTCAACGGCAGCGGCCCCAGCTGGTGGCCAGAGTGCACCTGTACCAACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374360.8
ENST00000463252.5
CDS CAA 72 bp CAGGTGCACTCTGGCCACCAGCTGGGGCCGCTGCCGTaGAGTTTGGGGGTGCTCTTGCCCGGGACTGGCTTA +
Preference number: 6 (lower is better)
Translates to: QVHSGHQLGPLP*SLGVLLPGTGL
Trigger: TAAGCCAGTCCCGGGCAAGAGCACCCCCAAACTCAACGGCAGCGGCCCCAGCTGGTGGCCAGAGTGCACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374360.8
ENST00000463252.5
CDS CCA 72 bp CTGCTCATACCAGTCCCGGTTGGTACAGGTGCACTCTaGCCACCAGCTGGGGCCGCTGCCGTTGAGTTTGGG +
Preference number: 6 (lower is better)
Translates to: LLIPVPVGTGAL*PPAGAAAVEFG
Trigger: CCCAAACTCAACGGCAGCGGCCCCAGCTGGTGGCCAGAGTGCACCTGTACCAACCGGGACTGGTATGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374360.8
ENST00000463252.5
CDS CAA 90 bp AGGCGGAGTAAGGGGTACTGGAGCTCCTCCTCCCTACCCTACCATTaGGGCATCCCCATGAAGTCTGTCTCACCGCCAGCAGCCGGTCCC +
Preference number: 6 (lower is better)
Translates to: RRSKGYWSSSSLPYH*GIPMKSVSPPAAGP
Trigger: GGGACCGGCTGCTGGCGGTGAGACAGACTTCATGGGGATGCCCAAATGGTAGGGTAGGGAGGAGGAGCTCCAGTACCCCTTACTCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463252.5
CDS CCA 72 bp CCCTTTGAGCAGGTTGACCTCCATGATGGTCTCGGGTaGAGGCTGTCGCCTCCGCACCACCAATCGCACCAC +
Preference number: 6 (lower is better)
Translates to: PFEQVDLHDGLG*RLSPPHHQSHH
Trigger: GTGGTGCGATTGGTGGTGCGGAGGCGACAGCCTCCACCCGAGACCATCATGGAGGTCAACCTGCTCAAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374360.8
ENST00000463252.5
CDS CCA 72 bp CATCACTGCCATTCACCTGCTCATACCAGTCCCGGTTaGTACAGGTGCACTCTGGCCACCAGCTGGGGCCGC +
Preference number: 6 (lower is better)
Translates to: HHCHSPAHTSPG*YRCTLATSWGR
Trigger: GCGGCCCCAGCTGGTGGCCAGAGTGCACCTGTACCAACCGGGACTGGTATGAGCAGGTGAATGGCAGTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374360.8
ENST00000463252.5
CDS CAA 72 bp CCATCACTGCCATTCACCTGCTCATACCAGTCCCGGTaGGTACAGGTGCACTCTGGCCACCAGCTGGGGCCG +
Preference number: 6 (lower is better)
Translates to: PSLPFTCSYQSR*VQVHSGHQLGP
Trigger: CGGCCCCAGCTGGTGGCCAGAGTGCACCTGTACCAACCGGGACTGGTATGAGCAGGTGAATGGCAGTGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374360.8
ENST00000463252.5
CDS CCA 72 bp TCTTCAGGTCTGTACTGGGCCACAATGGTGACTGACTaGCCGGCCCGTTTCAGAGCAGCTGCAGCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: SSGLYWATMVTD*PARFRAAAACS
Trigger: TGAGCAGGCTGCAGCTGCTCTGAAACGGGCCGGCCAGTCAGTCACCATTGTGGCCCAGTACAGACCTGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000463252.5
CDS CAA 72 bp ATGCTGAAACCCAGGCCTTTGGGCCCTTTGAGCAGGTaGACCTCCATGATGGTCTCGGGTGGAGGCTGTCGC +
Preference number: 6 (lower is better)
Translates to: MLKPRPLGPLSR*TSMMVSGGGCR
Trigger: GCGACAGCCTCCACCCGAGACCATCATGGAGGTCAACCTGCTCAAAGGGCCCAAAGGCCTGGGTTTCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374360.8
ENST00000463252.5
CDS TCA 72 bp GTATTCTTCAGGTCTGTACTGGGCCACAATGGTGACTaGCTGGCCGGCCCGTTTCAGAGCAGCTGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: VFFRSVLGHNGD*LAGPFQSSCSL
Trigger: CAGGCTGCAGCTGCTCTGAAACGGGCCGGCCAGTCAGTCACCATTGTGGCCCAGTACAGACCTGAAGAATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000463252.5
CDS TCA 72 bp CACCGGGCCGGTCAGAGTCCCGCCAGCCCCACCGGCTaGACTGCTTTCTTCTCTAATTTGAAATGGTTGCAG +
Preference number: 6 (lower is better)
Translates to: HRAGQSPASPTG*TAFFSNLKWLQ
Trigger: CTGCAACCATTTCAAATTAGAGAAGAAAGCAGTTCAGCCGGTGGGGCTGGCGGGACTCTGACCGGCCCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374355.7
CDS GCA 72 bp GGCAAAGAAGAAGCGGGAGCTCAAGCAGAGAATGGGTaGTGTGAGGACCGCTTCTGCTCTGGTCCCCAGGAT +
Preference number: 6 (lower is better)
Translates to: GKEEAGAQAENG*CEDRFCSGPQD
Trigger: ATCCTGGGGACCAGAGCAGAAGCGGTCCTCACAGCACCCATTCTCTGCTTGAGCTCCCGCTTCTTCTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374360.8
CDS CAA 72 bp AAGGGGTACTGGAGCTCCTCCTCCCTACCCTACCATTaGGGCATCCCCATGAAGTCTGTCTCACCGCCAGCA +
Preference number: 6 (lower is better)
Translates to: KGYWSSSSLPYH*GIPMKSVSPPA
Trigger: TGCTGGCGGTGAGACAGACTTCATGGGGATGCCCAAATGGTAGGGTAGGGAGGAGGAGCTCCAGTACCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463252.5
CDS TCA 72 bp GACTGTATTCTTCAGGTCTGTACTGGGCCACAATGGTaGCTGACTGGCCGGCCCGTTTCAGAGCAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: DCILQVCTGPQW*LTGRPVSEQLQ
Trigger: CTGCAGCTGCTCTGAAACGGGCCGGCCAGTCAGTCACCATTGTGGCCCAGTACAGACCTGAAGAATACAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000463252.5
CDS GCA 72 bp TCAGATGTGTTCTTCAGTGAGGCCACAGCTTCCTCGTaGCTCACATCCTGCAGATTGGTGTTGTTCACCGCC +
Preference number: 6 (lower is better)
Translates to: SDVFFSEATASS*LTSCRLVLFTA
Trigger: GGCGGTGAACAACACCAATCTGCAGGATGTGAGGCACGAGGAAGCTGTGGCCTCACTGAAGAACACATCTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000374360.8
CDS CCA 72 bp CTCCCTGCACTTCTGTCCTCGATCAGAAGAGCCTCGTaGAAAAGGTCGCAGGCTCTCTCTTCTTTCCCTTCA +
Preference number: 6 (lower is better)
Translates to: LPALLSSIRRAS*KRSQALSSFPS
Trigger: TGAAGGGAAAGAAGAGAGAGCCTGCGACCTTTTCCACGAGGCTCTTCTGATCGAGGACAGAAGTGCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494493.1
CDS TCA 72 bp CCAGCCCCACCGGCTGAACTGCTTTCTTCTCTAATTTaGAATGGTTGCAGCAGAGCGGGCTGCAACTATCTC +
Preference number: 6 (lower is better)
Translates to: PAPPAELLSSLI*NGCSRAGCNYL
Trigger: GAGATAGTTGCAGCCCGCTCTGCTGCAACCATTTCAAATTAGAGAAGAAAGCAGTTCAGCCGGTGGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374355.7
CDS GCA 72 bp ACAGTCATTCACCCCCAGCCTCCCATCCATGGCAGCTaGTCCACCAGGGATAATCTTGGTAATAAAGATGCC +
Preference number: 6 (lower is better)
Translates to: TVIHPQPPIHGS*STRDNLGNKDA
Trigger: GGCATCTTTATTACCAAGATTATCCCTGGTGGAGCAGCTGCCATGGATGGGAGGCTGGGGGTGAATGACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194900.8
ENST00000374360.8
ENST00000463252.5
CDS CCA 72 bp TTCGATTCAAAGCGACTGTATTCTTCAGGTCTGTACTaGGCCACAATGGTGACTGACTGGCCGGCCCGTTTC +
Preference number: 6 (lower is better)
Translates to: FDSKRLYSSGLY*ATMVTDWPARF
Trigger: GAAACGGGCCGGCCAGTCAGTCACCATTGTGGCCCAGTACAGACCTGAAGAATACAGTCGCTTTGAATCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000463252.5
CDS CAA 90 bp AAGCCCAGGCCAGAGTTGCCCCTCTCAAGTACGATTTCCTCATATTaGAACATGCCATCACTGCCATTCACCTGCTCATACCAGTCCCGG +
Preference number: 6 (lower is better)
Translates to: KPRPELPLSSTISSY*NMPSLPFTCSYQSR
Trigger: CCGGGACTGGTATGAGCAGGTGAATGGCAGTGATGGCATGTTCAAATATGAGGAAATCGTACTTGAGAGGGGCAACTCTGGCCTGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374360.8
ENST00000463252.5
CDS CCA 72 bp CTTGTCCTTTGGAACTGCTTTCGCTGTCACTGGTGTTaGATGTCACTCCCTGTTCCTGTATGCTGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: LVLWNCFRCHWC*MSLPVPVCCSP
Trigger: AGGAGAGCAGCATACAGGAACAGGGAGTGACATCCAACACCAGTGACAGCGAAAGCAGTTCCAAAGGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374355.7
ENST00000463252.5
ENST00000489733.5
ENST00000542398.1
CDS CAA 72 bp TCTTGTCCTTTGGAACTGCTTTCGCTGTCACTGGTGTaGGATGTCACTCCCTGTTCCTGTATGCTGCTCTCC +
Preference number: 6 (lower is better)
Translates to: SCPLELLSLSLV*DVTPCSCMLLS
Trigger: GGAGAGCAGCATACAGGAACAGGGAGTGACATCCAACACCAGTGACAGCGAAAGCAGTTCCAAAGGACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374355.7
ENST00000463252.5
ENST00000489733.5
ENST00000542398.1
CDS CCA 72 bp TTCGGAGATCAGGTCATCATTGACTCGGTCCTTCATTaGGCCCAGGATGATCACAGGCCTTGCATAGTGAAT +
Preference number: 6 (lower is better)
Translates to: FGDQVIIDSVLH*AQDDHRPCIVN
Trigger: ATTCACTATGCAAGGCCTGTGATCATCCTGGGCCCAATGAAGGACCGAGTCAATGATGACCTGATCTCCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000461646.1
ENST00000463252.5
ENST00000466140.5
ENST00000542398.1
CDS CAA 72 bp CCAGAGTTGCCCCTCTCAAGTACGATTTCCTCATATTaGAACATGCCATCACTGCCATTCACCGAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: PELPLSSTISSY*NMPSLPFTERL
Trigger: CAGCCTCTCGGTGAATGGCAGTGATGGCATGTTCAAATATGAGGAAATCGTACTTGAGAGGGGCAACTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194900.8
CDS GCA 72 bp CACTGGTGTTGGATGTCACTCCCTGTTCCTGTATGCTaGTCTCCTGGGCCATGTTTTCTTTGCTCTTGTAAA +
Preference number: 6 (lower is better)
Translates to: HWCWMSLPVPVC*SPGPCFLCSCK
Trigger: TTTACAAGAGCAAAGAAAACATGGCCCAGGAGAGCAGCATACAGGAACAGGGAGTGACATCCAACACCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374355.7
ENST00000463252.5
ENST00000489733.5
ENST00000542398.1
CDS GCA 72 bp TTTCACTTGTTCGGAGGGACCCAGACCCAGAGCTCATaGTGCTGTTCATCATTTGTTCTCGTAAGTCATGTA +
Preference number: 6 (lower is better)
Translates to: FHLFGGTQTQSS*CCSSFVLVSHV
Trigger: TACATGACTTACGAGAACAAATGATGAACAGCAGCATGAGCTCTGGGTCTGGGTCCCTCCGAACAAGTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000463252.5
ENST00000466140.5
ENST00000489733.5
ENST00000494493.1
ENST00000542398.1
CDS CCA 72 bp CTTGTCCTTTGGAACTGCTTTCGCTGTCACTGGTGTTaGATGTCACTCCCTTCAGGTTCTTTGCTCCATAAT +
Preference number: 6 (lower is better)
Translates to: LVLWNCFRCHWC*MSLPSGSLLHN
Trigger: ATTATGGAGCAAAGAACCTGAAGGGAGTGACATCCAACACCAGTGACAGCGAAAGCAGTTCCAAAGGACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194900.8
ENST00000466140.5
CDS CAA 72 bp CCAGAGTTGCCCCTCTCAAGTACGATTTCCTCATATTaGAACATGCCATCACTGCCATTCACCTGCTCATAC +
Preference number: 6 (lower is better)
Translates to: PELPLSSTISSY*NMPSLPFTCSY
Trigger: GTATGAGCAGGTGAATGGCAGTGATGGCATGTTCAAATATGAGGAAATCGTACTTGAGAGGGGCAACTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374360.8
ENST00000463252.5
CDS CAA 72 bp CCAAATTTATGTGGAAATTCGGAGATCAGGTCATCATaGACTCGGTCCTTCATTGGGCCCAGGATGATCACA +
Preference number: 6 (lower is better)
Translates to: PNLCGNSEIRSS*TRSFIGPRMIT
Trigger: TGTGATCATCCTGGGCCCAATGAAGGACCGAGTCAATGATGACCTGATCTCCGAATTTCCACATAAATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000461646.1
ENST00000463252.5
ENST00000466140.5
ENST00000542398.1
CDS CAA 90 bp GCAAATCACTTTCTTCTCCATTTCCCTTCCAGACCCGATCTTAGCTaGGTGTGTCTGAGTTCTCAGTTCAACACTTACATAAGGGCTTCA +
Preference number: 6 (lower is better)
Translates to: ANHFLLHFPSRPDLS*VCLSSQFNTYIRAS
Trigger: TGAAGCCCTTATGTAAGTGTTGAACTGAGAACTCAGACACACCAAGCTAAGATCGGGTCTGGAAGGGAAATGGAGAAGAAAGTGATTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496931.1
CDS CAA 72 bp TTTCTTCTCCATTTCCCTTCCAGACCCGATCTTAGCTaGGTGTGTCTGAGTTCTCAGTTCAACACTTACATA +
Preference number: 6 (lower is better)
Translates to: FLLHFPSRPDLS*VCLSSQFNTYI
Trigger: TATGTAAGTGTTGAACTGAGAACTCAGACACACCAAGCTAAGATCGGGTCTGGAAGGGAAATGGAGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496931.1
CDS GCA 72 bp CTGCTCCAGTTTCATGGCTTTGTCATAGATCTTATTTaGTTGTTCATATGTCTGCCTTCGGTTCATTTCCCT +
Preference number: 6 (lower is better)
Translates to: LLQFHGFVIDLI*LFICLPSVHFP
Trigger: AGGGAAATGAACCGAAGGCAGACATATGAACAAGCAAATAAGATCTATGACAAAGCCATGAAACTGGAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496931.1
CDS GCA 72 bp CTGCTCCAGTTTCATGGCTTTGTCATAGATCTTATTTaGTTGTTCATATGTCTGCCTTCGGTTCATTTCCAT +
Preference number: 6 (lower is better)
Translates to: LLQFHGFVIDLI*LFICLPSVHFH
Trigger: ATGGAAATGAACCGAAGGCAGACATATGAACAAGCAAATAAGATCTATGACAAAGCCATGAAACTGGAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000194900.8
ENST00000374355.7
ENST00000374360.8
ENST00000461646.1
ENST00000463252.5
ENST00000542398.1