RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DLG2 (Homo sapiens)

Ensembl gene IDs: ENSG00000150672

Ensembl transcript IDs: ENST00000280241.12, ENST00000330014.11, ENST00000376104.7, ENST00000398299.1, ENST00000398301.6, ENST00000398304.5, ENST00000398309.6, ENST00000404783.7, ENST00000418306.6, ENST00000420775.6, ENST00000426717.6, ENST00000434967.1, ENST00000456295.2, ENST00000457267.5, ENST00000472545.6, ENST00000524941.5, ENST00000524982.5, ENST00000526147.1, ENST00000527088.1, ENST00000527466.1, ENST00000529111.5, ENST00000529159.1, ENST00000529399.1, ENST00000529401.5, ENST00000530260.5, ENST00000530589.1, ENST00000530800.5, ENST00000531015.5, ENST00000532653.5, ENST00000648622.1, ENST00000650630.1

Found 2040 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGCACTCAGGCGCCGGCAGGGCCCACAGCACATGCATCATCGCTaGCAGGGCAACGGTGCAGGCTGGCTCCGGGAGGCGGGCTGGAGC +
Preference number: 1 (lower is better)
Translates to: EALRRRQGPQHMHHR*QGNGAGWLREAGWS
Trigger: GCTCCAGCCCGCCTCCCGGAGCCAGCCTGCACCGTTGCCCTGGCAGCGATGATGCATGTGCTGTGGGCCCTGCCGGCGCCTGAGTGCCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 90 bp GGCCCACAGCACATGCATCATCGCTGCCAGGGCAACGGTGCAGGCTaGCTCCGGGAGGCGGGCTGGAGCAGGCTCCAGGTCAGGGCCTCA +
Preference number: 1 (lower is better)
Translates to: GPQHMHHRCQGNGAG*LREAGWSRLQVRAS
Trigger: TGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCCCGGAGCCAGCCTGCACCGTTGCCCTGGCAGCGATGATGCATGTGCTGTGGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR GCA 90 bp GTGTTCAGGCAGAGGCACTCAGGCGCCGGCAGGGCCCACAGCACATaGATCATCGCTGCCAGGGCAACGGTGCAGGCTGGCTCCGGGAGG +
Preference number: 1 (lower is better)
Translates to: VFRQRHSGAGRAHST*IIAARATVQAGSGR
Trigger: CCTCCCGGAGCCAGCCTGCACCGTTGCCCTGGCAGCGATGATGCATGTGCTGTGGGCCCTGCCGGCGCCTGAGTGCCTCTGCCTGAACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 90 bp CATCGCTGCCAGGGCAACGGTGCAGGCTGGCTCCGGGAGGCGGGCTaGAGCAGGCTCCAGGTCAGGGCCTCACGCTCAGCTTTACTTTCT +
Preference number: 1 (lower is better)
Translates to: HRCQGNGAGWLREAG*SRLQVRASRSALLS
Trigger: AGAAAGTAAAGCTGAGCGTGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCCCGGAGCCAGCCTGCACCGTTGCCCTGGCAGCGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 90 bp CTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTaGCAGAATCCCTGCCAGGTCTGGATGTACCCCAGAAATAAGGCG +
Preference number: 1 (lower is better)
Translates to: LLLSYPAYMLVCCTV*QNPCQVWMYPRNKA
Trigger: CGCCTTATTTCTGGGGTACATCCAGACCTGGCAGGGATTCTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR GCA 90 bp CATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATaGTGGTTTGCTGCACAGTGTGGCAGAATCCCTGCCAGGTCTGGA +
Preference number: 1 (lower is better)
Translates to: HHSDGSISCSPTQPT*WFAAQCGRIPARSG
Trigger: TCCAGACCTGGCAGGGATTCTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR CCA 90 bp GGCAGAATCCCTGCCAGGTCTGGATGTACCCCAGAAATAAGGCGATaGGGCTTAGTCTGGGCATGCACAGAACCCAGAGTAGAGTGGTTA +
Preference number: 1 (lower is better)
Translates to: GRIPARSGCTPEIRR*GLVWACTEPRVEWL
Trigger: TAACCACTCTACTCTGGGTTCTGTGCATGCCCAGACTAAGCCCCATCGCCTTATTTCTGGGGTACATCCAGACCTGGCAGGGATTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR CCA 90 bp CACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTaGTTTGCTGCACAGTGTGGCAGAATCCCTGCCAGGTCTGGATGT +
Preference number: 1 (lower is better)
Translates to: HSDGSISCSPTQPTC*FAAQCGRIPARSGC
Trigger: ACATCCAGACCTGGCAGGGATTCTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR CCA 90 bp AAAGACACAGAGAGCTCTGCAGCTAAATCAGCTCTGGACATCTGCTaGGGTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGT +
Preference number: 1 (lower is better)
Translates to: KDTESSAAKSALDIC*GEEALISSLGQKAR
Trigger: ACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGCTCTCTGTGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR CCA 90 bp GGTTGGAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTaGCCCCAGGCTCCGAGTGCATTTGCACCAGATGTAATCTGGGTA +
Preference number: 1 (lower is better)
Translates to: GWRELWTKFAVLAPV*PQAPSAFAPDVIWV
Trigger: TACCCAGATTACATCTGGTGCAAATGCACTCGGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR GCA 90 bp GTTCTTACTGTGAAGAAGCCCCATCACTCTGATGGCTCTATCTCTTaGTCTCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTGGC +
Preference number: 1 (lower is better)
Translates to: VLTVKKPHHSDGSIS*SPTQPTCWFAAQCG
Trigger: GCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGGGCTTCTTCACAGTAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR GCA 90 bp GACAAAGTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCGAGTaGATTTGCACCAGATGTAATCTGGGTAACTTTCATGCCATTTCC +
Preference number: 1 (lower is better)
Translates to: DKVCSVSTSLAPGSE*ICTRCNLGNFHAIS
Trigger: GGAAATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTCGGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 90 bp CTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTaGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCT +
Preference number: 1 (lower is better)
Translates to: LISWAESPSEVHPYT*HFEQTKAFLHTAMS
Trigger: AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR CCA 90 bp TCTTTAAAGCAAAAGACACAGAGAGCTCTGCAGCTAAATCAGCTCTaGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATCTCTTGGGC +
Preference number: 1 (lower is better)
Translates to: SLKQKTQRALQLNQL*TSAGVRRLSSHLLG
Trigger: GCCCAAGAGATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGCTCTCTGTGTCTTTTGCTTTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR CCA 90 bp GCCAGGTCTGGATGTACCCCAGAAATAAGGCGATGGGGCTTAGTCTaGGCATGCACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAA +
Preference number: 1 (lower is better)
Translates to: ARSGCTPEIRRWGLV*ACTEPRVEWLLSLK
Trigger: TTTCAGTGATAATAACCACTCTACTCTGGGTTCTGTGCATGCCCAGACTAAGCCCCATCGCCTTATTTCTGGGGTACATCCAGACCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR TCA 90 bp TTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTaGGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTC +
Preference number: 1 (lower is better)
Translates to: LGRKPVRGSSLHLAL*ANQSLPSYCNVFSV
Trigger: GACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR TCA 90 bp CATTCTAAGCTCCGATGTTCTTACTGTGAAGAAGCCCCATCACTCTaGTGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTT +
Preference number: 1 (lower is better)
Translates to: HSKLRCSYCEEAPSL*WLYLLLSYPAYMLV
Trigger: AACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGGGCTTCTTCACAGTAAGAACATCGGAGCTTAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR GCA 90 bp GTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCGAGTGCATTTaGACCAGATGTAATCTGGGTAACTTTCATGCCATTTCCATACAA +
Preference number: 1 (lower is better)
Translates to: VCSVSTSLAPGSECI*TRCNLGNFHAISIQ
Trigger: TTGTATGGAAATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTCGGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR TCA 90 bp AAGAGGTTTGCTATCAGAATAATTGGGGCCAGAGTCTGCCTTTATTaGAAGAAAATGTCCTCAGAGCCATGCGGTAGTGCTGGGAGTGGG +
Preference number: 1 (lower is better)
Translates to: KRFAIRIIGARVCLY*KKMSSEPCGSAGSG
Trigger: CCCACTCCCAGCACTACCGCATGGCTCTGAGGACATTTTCTTTCAATAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCAAACCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR TCA 90 bp CGGTGGAGAAACATCCTGTCAGAGAGAAGCACAAAACTGTCATATTaGAAGGATCTAACGGGTACAGCCTGGTGCACTCAGAAGTTAAGA +
Preference number: 1 (lower is better)
Translates to: RWRNILSERSTKLSY*KDLTGTAWCTQKLR
Trigger: TCTTAACTTCTGAGTGCACCAGGCTGTACCCGTTAGATCCTTTCAATATGACAGTTTTGTGCTTCTCTCTGACAGGATGTTTCTCCACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR GCA 90 bp AAAAAGGAGAGAAGAAAAGTCTGCCATCCCATTGGGAGTCAACCTTaGCACTTGGTTGTCTGTCCTCATGAGTTGCTAGGGAGATACTAT +
Preference number: 1 (lower is better)
Translates to: KKERRKVCHPIGSQP*HLVVCPHELLGRYY
Trigger: ATAGTATCTCCCTAGCAACTCATGAGGACAGACAACCAAGTGGCAAGGTTGACTCCCAATGGGATGGCAGACTTTTCTTCTCTCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 90 bp ACACCATGGGCAAAAGCAATGCTGATGTCGCCATCCACTCTAAAGTaGGAAACCAACTCTTCTAGTTCAGTTTATAGGCTTTGGGAGGTT +
Preference number: 1 (lower is better)
Translates to: TPWAKAMLMSPSTLK*ETNSSSSVYRLWEV
Trigger: AACCTCCCAAAGCCTATAAACTGAACTAGAAGAGTTGGTTTCCCACTTTAGAGTGGATGGCGACATCAGCATTGCTTTTGCCCATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR CCA 90 bp ATTATGTCATGGCCAAAATTGATCTTCAGTCCTCTTCCACCACGTTaGCATCCTTCAGTTAAAGGAACAACAGCCTTTCACCTGGTGTGG +
Preference number: 1 (lower is better)
Translates to: IMSWPKLIFSPLPPR*HPSVKGTTAFHLVW
Trigger: CCACACCAGGTGAAAGGCTGTTGTTCCTTTAACTGAAGGATGCCAACGTGGTGGAAGAGGACTGAAGATCAATTTTGGCCATGACATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472545.6
3UTR TCA 90 bp CCATCCCATTGGGAGTCAACCTTGCCACTTGGTTGTCTGTCCTCATaGGTTGCTAGGGAGATACTATACTCTTTAGATGATCTTTGTCTA +
Preference number: 1 (lower is better)
Translates to: PSHWESTLPLGCLSS*VAREILYSLDDLCL
Trigger: TAGACAAAGATCATCTAAAGAGTATAGTATCTCCCTAGCAACTCATGAGGACAGACAACCAAGTGGCAAGGTTGACTCCCAATGGGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 90 bp TATCGTGGTGGCCTAAAAATAGAGCTGGGATCAGGAATGGCATTCTaGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCT +
Preference number: 1 (lower is better)
Translates to: YRGGLKIELGSGMAF*CQKTSGSNIDESRP
Trigger: AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCATTCCTGATCCCAGCTCTATTTTTAGGCCACCACGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR GCA 90 bp TACCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTaGTGGCAATTTTTCTTTAAAGCAAAAGACACAGAGAGCTCTGCA +
Preference number: 1 (lower is better)
Translates to: YQLQMWVMGRLMRFE*WQFFFKAKDTESSA
Trigger: TGCAGAGCTCTCTGTGTCTTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR GCA 90 bp AATTGTCCGCCTGTCTTAGCTTTGTCCTCAGCTGTTACAAGAAACTaGACAGCTGTACAAGAAATGATTTCCAAAGCACAGGTTTCAGTG +
Preference number: 1 (lower is better)
Translates to: NCPPVLALSSAVTRN*TAVQEMISKAQVSV
Trigger: CACTGAAACCTGTGCTTTGGAAATCATTTCTTGTACAGCTGTGCAGTTTCTTGTAACAGCTGAGGACAAAGCTAAGACAGGCGGACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 90 bp CGTTGGCATCCTTCAGTTAAAGGAACAACAGCCTTTCACCTGGTGTaGTCAGTGGATTCGCATACAAGGTTTGTAGTTCTTATTTATGAT +
Preference number: 1 (lower is better)
Translates to: RWHPSVKGTTAFHLV*SVDSHTRFVVLIYD
Trigger: ATCATAAATAAGAACTACAAACCTTGTATGCGAATCCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAACTGAAGGATGCCAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
3UTR CCA 90 bp AAAATAAACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTaGTTGAGCTCAAAGTCATTAATTGTCTTTCCTTGTGACTCTATC +
Preference number: 1 (lower is better)
Translates to: KINLVQVQLQERQFS*LSSKSLIVFPCDSI
Trigger: GATAGAGTCACAAGGAAAGACAATTAATGACTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR CCA 90 bp TGGTGGTTCAATTTGATTGTACTTAGCCACAGCAACACTAGTAAATaGAAAGCACATCACACGACCCGCGAAAACATCTACTCATTAATG +
Preference number: 1 (lower is better)
Translates to: WWFNLIVLSHSNTSK*KAHHTTRENIYSLM
Trigger: CATTAATGAGTAGATGTTTTCGCGGGTCGTGTGATGTGCTTTCCATTTACTAGTGTTGCTGTGGCTAAGTACAATCAAATTGAACCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 90 bp TTTCCATACAAGTCATCAGATTTGCTGCAAAATACACCAGTTCATTaGAGCCATAGAGACATCAACATTGGGAAGTGCAAGACAACACAA +
Preference number: 1 (lower is better)
Translates to: FPYKSSDLLQNTPVH*SHRDINIGKCKTTQ
Trigger: TTGTGTTGTCTTGCACTTCCCAATGTTGATGTCTCTATGGCTCCAATGAACTGGTGTATTTTGCAGCAAATCTGATGACTTGTATGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 90 bp TCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTaGCAACAAAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATC +
Preference number: 1 (lower is better)
Translates to: SLSDLKGTQMLLTDH*QQKGECNFQVLNLI
Trigger: GATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTTTGTTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp GGAGGCGGGCTGGAGCAGGCTCCAGGTCAGGGCCTCACGCTCAGCTTTACTTTCCCAGAAATAAGGCGATaGGGCTTAGTCTGGGCATGC +
Preference number: 2 (lower is better)
Translates to: GGGLEQAPGQGLTLSFTFPEIRR*GLVWAC
Trigger: GCATGCCCAGACTAAGCCCCATCGCCTTATTTCTGG...GAAAGTAAAGCTGAGCGTGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CCA 90 bp GGAGGCGGGCTGGAGCAGGCTCCAGGTCAGGGCCTCACGCTCAGCTTTACTTTCAGCAAGCCTTCAGGTTaGAGAGAGCTCTGGACAAAG +
Preference number: 2 (lower is better)
Translates to: GGGLEQAPGQGLTLSFTFSKPSG*RELWTK
Trigger: CTTTGTCCAGAGCTCTCTCCAACCTGAAGGCTTGCT...GAAAGTAAAGCTGAGCGTGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR TCA 90 bp AGCTCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTGGAGCTGGCTGCAGCTaGACTCTCAGGAGAACCCAG +
Preference number: 2 (lower is better)
Translates to: SSWSWGRTPPSFFSRVTAGAGCS*TLRRTQ
Trigger: CTGGGTTCTCCTGAGAGTTCAGCTGCAGCCAGCTCC...AGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
3UTR CAA 90 bp CAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATCTCTaGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTT +
Preference number: 2 (lower is better)
Translates to: QLWTSAGVRRLSSHL*GRKPVRGSSLHLAL
Trigger: AAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCACCCAGCCTACATGCTaGTTTGCTGCACAGTGTGGC +
Preference number: 2 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSTQPTC*FAAQCG
Trigger: GCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGT...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR GCA 90 bp GAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCGGCTTAGTCTGGGCATaGACAGAACCCAGAGTAGAG +
Preference number: 2 (lower is better)
Translates to: ERALDKVCSVSTSLAPGSGLVWA*TEPRVE
Trigger: CTCTACTCTGGGTTCTGTGCATGCCCAGACTAAGCC...GGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR GCA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCGCCCCAGGCTCCGAGTaGATTTGCACCAGATGTAAT +
Preference number: 2 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSAPGSE*ICTRCN
Trigger: ATTACATCTGGTGCAAATGCACTCGGAGCCTGGGGC...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CCA 90 bp TATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTGGCAGGCTCTGGACATCTGCTaGGGTGAGGAGGCTCTCATC +
Preference number: 2 (lower is better)
Translates to: YLLLSYPAYMLVCCTVWQALDIC*GEEALI
Trigger: GATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGC...CTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR TCA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCCCGATGTTCTTACTGTaGAGAAGCCCCATCACTCTG +
Preference number: 2 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSPMFLL*RSPITL
Trigger: CAGAGTGATGGGGCTTCTTCACAGTAAGAACATCGG...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR TCA 90 bp GGAGGCGGGCTGGAGCAGGCTCCAGGTCAGGGCCTCACGCTCAGCTTTACTTTCCATTGTACCAGAGCATaGAAAATAGCACCAGTTACA +
Preference number: 2 (lower is better)
Translates to: GGGLEQAPGQGLTLSFTFHCTRA*KIAPVT
Trigger: TGTAACTGGTGCTATTTTTCATGCTCTGGTACAATG...GAAAGTAAAGCTGAGCGTGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR TCA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCCATGGACTTGCTGTCTaGATCAGCCATGAGCCCTTT +
Preference number: 2 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSHGLAV*ISHEPF
Trigger: AAAGGGCTCATGGCTGATTCAGACAGCAAGTCCATG...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CAA 90 bp CCAGCATGTGTGAAGGTGACATTGCACCCCCAGCAAGCCTTCAGGTaGGAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTG +
Preference number: 2 (lower is better)
Translates to: PACVKVTLHPQQAFR*ERALDKVCSVSTSL
Trigger: CAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTCCAACCTGAAGGCTTGCTGGGGGTGCAATGTCACCTTCACACATGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR TCA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCGATGAAAGTAGGCCTTaGCCTGAAACTGGCGAATTG +
Preference number: 2 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSDESRP*PETGEL
Trigger: CAATTCGCCAGTTTCAGGTCAAGGCCTACTTTCATC...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR GCA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGTCAGCTCTGGACATCTaGTGGGGTGAGGAGGCTCTC +
Preference number: 2 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKSALDI*WGEEAL
Trigger: GAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGA...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTCAGCTAAATCAGCTCTaGACATCTGCTGGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: PITLMALSLALLPSLHAGQLNQL*TSAGVR
Trigger: CCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTG...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp TATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTGGCAGCAGCTAAATCAGCTCTaGACATCTGCTGGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: YLLLSYPAYMLVCCTVWQQLNQL*TSAGVR
Trigger: CCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTG...CTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp GGAGGCGGGCTGGAGCAGGCTCCAGGTCAGGGCCTCACGCTCAGCTTTACTTTCAGGTGTAAATTCTATTaGAAAAGACCCTCTCACCAA +
Preference number: 2 (lower is better)
Translates to: GGGLEQAPGQGLTLSFTFRCKFY*KRPSHQ
Trigger: TTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCT...GAAAGTAAAGCTGAGCGTGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CCA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATAGGCAACGGTGCAGGCTaGCTCCGGGAGGCGGGCTGG +
Preference number: 2 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFIGNGAG*LREAGW
Trigger: CCAGCCCGCCTCCCGGAGCCAGCCTGCACCGTTGCC...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR TCA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTGGACATCTGCTGGGGTaGGGAGGCTCTCATCTCATC +
Preference number: 2 (lower is better)
Translates to: PITDVGNGKADEVRVLAIGHLLG*GGSHLI
Trigger: GATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCC...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR TCA 90 bp GAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCAAGGGATGTGCTGCATaGGAGTGTATCACTAATGTG +
Preference number: 2 (lower is better)
Translates to: ERALDKVCSVSTSLAPGSKGCAA*ECITNV
Trigger: CACATTAGTGATACACTCTCATGCAGCACATCCCTT...GGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR GCA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCGAGGAGGAAGAGGTTTaGTATCAGAATAATTGGGGC +
Preference number: 2 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSEEEEV*YQNNWG
Trigger: GCCCCAATTATTCTGATAGCAAACCTCTTCCTCCTC...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CCA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCGCTCTGGACATCTGCTaGGGTGAGGAGGCTCTCATC +
Preference number: 2 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGALDIC*GEEALI
Trigger: GATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGC...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR TCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGGGACATCTGCTGGGGTaGGGAGGCTCTCATCTCATC +
Preference number: 2 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGGHLLG*GGSHLI
Trigger: GATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCC...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGGCTCTGGACATCTGCTaGGGTGAGGAGGCTCTCATC +
Preference number: 2 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGALDIC*GEEALI
Trigger: GATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGC...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR TCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTAAGGGATGTGCTGCATaGGAGTGTATCACTAATGTG +
Preference number: 2 (lower is better)
Translates to: PITLMALSLALLPSLHAGKGCAA*ECITNV
Trigger: CACATTAGTGATACACTCTCATGCAGCACATCCCTT...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR TCA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCAATTGTCTTTCCTTGTaGCTCTATCTCTTTGCTCTG +
Preference number: 2 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSNCLSL*LYLFAL
Trigger: CAGAGCAAAGAGATAGAGTCACAAGGAAAGACAATT...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR TCA 90 bp GAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCAATTGTCTTTCCTTGTaGCTCTATCTCTTTGCTCTG +
Preference number: 2 (lower is better)
Translates to: ERALDKVCSVSTSLAPGSNCLSL*LYLFAL
Trigger: CAGAGCAAAGAGATAGAGTCACAAGGAAAGACAATT...GGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CAA 90 bp CTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTaGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGT +
Preference number: 2 (lower is better)
Translates to: LGQKARQRFIPTPGT*SKPKPSFILQCLFC
Trigger: ACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCCTCTGTTTCCTTCATaGCTTCATACAGTTTGTGTT +
Preference number: 2 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSPLFPS*LHTVCV
Trigger: AACACAAACTGTATGAAGCCATGAAGGAAACAGAGG...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTCCATCCACTCTAAAGTaGGAAACCAACTCTTCTAGT +
Preference number: 2 (lower is better)
Translates to: PITLMALSLALLPSLHAGPSTLK*ETNSSS
Trigger: ACTAGAAGAGTTGGTTTCCCACTTTAGAGTGGATGG...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR GCA 90 bp GAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCTTTTGTTCTTCTAAATaGTCTTCTGTCGTTGTCAGA +
Preference number: 2 (lower is better)
Translates to: ERALDKVCSVSTSLAPGSFCSSK*SSVVVR
Trigger: TCTGACAACGACAGAAGAGCATTTAGAAGAACAAAA...GGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR GCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTTCAGCTCTGGACATCTaGTGGGGTGAGGAGGCTCTC +
Preference number: 2 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSSALDI*WGEEAL
Trigger: GAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGA...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR GCA 90 bp TATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTGGCAGCAACAAAAGGGAGAGTaGAACTTTCAGGTCTTGAAT +
Preference number: 2 (lower is better)
Translates to: YLLLSYPAYMLVCCTVWQQQKGE*NFQVLN
Trigger: ATTCAAGACCTGAAAGTTGCACTCTCCCTTTTGTTG...CTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR GCA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCAGGACTATGGGAAGATaGATAATTTTGCATTTCTGT +
Preference number: 2 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSRTMGR*IILHFC
Trigger: ACAGAAATGCAAAATTATGCATCTTCCCATAGTCCT...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATCCTCTGTTTCCTTCATaGCTTCATACAGTTTGTGTT +
Preference number: 2 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHPLFPS*LHTVCV
Trigger: AACACAAACTGTATGAAGCCATGAAGGAAACAGAGG...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTGCTCTGGACATCTGCTaGGGTGAGGAGGCTCTCATC +
Preference number: 2 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSALDIC*GEEALI
Trigger: GATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGC...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTGCTCTGGACATCTGCTaGGGTGAGGAGGCTCTCATC +
Preference number: 2 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEIALDIC*GEEALI
Trigger: GATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGC...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGAAAGCTAATCCCAGGTaGAATCCCCTCCTGTCAGTG +
Preference number: 2 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGKANPR*NPLLSV
Trigger: CACTGACAGGAGGGGATTCCACCTGGGATTAGCTTT...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTGTTTGCTGCACAGTGTaGCAGAATCCCTGCCAGGTC +
Preference number: 2 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPVCCTV*QNPCQV
Trigger: GACCTGGCAGGGATTCTGCCACACTGTGCAGCAAAC...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CAA 90 bp GAGAGAAGAAAAGTCTGCCATCCCATTGGGAGTCAACCTTGCCACTaGGTTGTCTGTCCTCATGAGTTGCTAGGGAGATACTATACTCTT +
Preference number: 2 (lower is better)
Translates to: ERRKVCHPIGSQPCH*VVCPHELLGRYYTL
Trigger: AAGAGTATAGTATCTCCCTAGCAACTCATGAGGACAGACAACCAAGTGGCAAGGTTGACTCCCAATGGGATGGCAGACTTTTCTTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CAA 90 bp GGAAACACAAACTCAAAAAGGAGAGAAGAAAAGTCTGCCATCCCATaGGGAGTCAACCTTGCCACTTGGTTGTCTGTCCTCATGAGTTGC +
Preference number: 2 (lower is better)
Translates to: GNTNSKRREEKSAIP*GVNLATWLSVLMSC
Trigger: GCAACTCATGAGGACAGACAACCAAGTGGCAAGGTTGACTCCCAATGGGATGGCAGACTTTTCTTCTCTCCTTTTTGAGTTTGTGTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR TCA 90 bp AAGATACAATCATTGACCCTGAGTCTGCCATCCTCTGCTGCAGCACCTCCTGGTCAATTTCTGTCCCATTaGCATAAGGAATTGTGTCCA +
Preference number: 2 (lower is better)
Translates to: KIQSLTLSLPSSAAAPPGQFLSH*HKELCP
Trigger: TGGACACAATTCCTTATGTCAATGGGACAGAAATTG...ACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTCAGGGTCAATGATTGTATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529401.5
3UTR-3UTR GCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTTTTGTTCTTCTAAATaGTCTTCTGTCGTTGTCAGA +
Preference number: 2 (lower is better)
Translates to: GSHLISWAESPSEVHPYTFCSSK*SSVVVR
Trigger: TCTGACAACGACAGAAGAGCATTTAGAAGAACAAAA...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR GCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCTTTTGTTCTTCTAAATaGTCTTCTGTCGTTGTCAGA +
Preference number: 2 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSFCSSK*SSVVVR
Trigger: TCTGACAACGACAGAAGAGCATTTAGAAGAACAAAA...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR GCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTAGTTATTCAACTATTTaGATGGCAGGCTCAGGTTAT +
Preference number: 2 (lower is better)
Translates to: PITLMALSLALLPSLHAGSYSTI*MAGSGY
Trigger: ATAACCTGAGCCTGCCATGCAAATAGTTGAATAACT...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCGTTCATCCCTACACCTaGCACTTTGAGCAAACCAAA +
Preference number: 2 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGVHPYT*HFEQTK
Trigger: TTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAAC...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp TTAAGCTACCTAATGAGGGAAACACCAAACTACTCTGGTATGATCACAGAGGCACAACAGCCTTTCACCTaGTGTGGTCAGTGGATTCGC +
Preference number: 2 (lower is better)
Translates to: LSYLMRETPNYSGMITEAQQPFT*CGQWIR
Trigger: GCGAATCCACTGACCACACCAGGTGAAAGGCTGTTG...TGCCTCTGTGATCATACCAGAGTAGTTTGGTGTTTCCCTCATTAGGTAGCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
3UTR CAA 90 bp ACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTaGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTA +
Preference number: 2 (lower is better)
Translates to: TKAFLHTAMSFLSHP*APLFPSWLHTVCVV
Trigger: TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR CAA 90 bp TCGGTGGAGAAACATCCTGTCAGAGAGAAGCACAAAACTGTCATATaGAAAGGATCTAACGGGTACAGCCTGGTGCACTCAGAAGTTAAG +
Preference number: 2 (lower is better)
Translates to: SVEKHPVREKHKTVI*KGSNGYSLVHSEVK
Trigger: CTTAACTTCTGAGTGCACCAGGCTGTACCCGTTAGATCCTTTCAATATGACAGTTTTGTGCTTCTCTCTGACAGGATGTTTCTCCACCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR TCA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTGGACATCTGCTGGGGTaGGGAGGCTCTCATCTCATC +
Preference number: 2 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVIGHLLG*GGSHLI
Trigger: GATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCC...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR TCA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGTTCCAAAAATATCCATaGGGGCAACTCATTAAGGGA +
Preference number: 2 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKFQKYP*GQLIKG
Trigger: TCCCTTAATGAGTTGCCCTCATGGATATTTTTGGAA...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR TCA 90 bp AAGATACAATCATTGACCCTGAGTCTGCCATCCTCTGCTGCAGCACCTCCTGGTATAGCCCAGAGTTTGTaGCATTTAAGTGATTTCGAA +
Preference number: 2 (lower is better)
Translates to: KIQSLTLSLPSSAAAPPGIAQSL*HLSDFE
Trigger: TTCGAAATCACTTAAATGTCACAAACTCTGGGCTAT...ACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTCAGGGTCAATGATTGTATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529401.5
3UTR-3UTR GCA 90 bp GTTTGCTATCAGAATAATTGGGGCCAGAGTCTGCCTTTATTGAAAGAAAATGTCCTGAGACCCCCGTGGTaGTACACATTGTACCAGAGC +
Preference number: 2 (lower is better)
Translates to: VCYQNNWGQSLPLLKENVLRPPW*YTLYQS
Trigger: GCTCTGGTACAATGTGTAGCACCACGGGGGTCTCAG...GACATTTTCTTTCAATAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CCA 90 bp CTACCTAATGAGGGAAACACCAAACTACTCTGGTATGATCACAGAGGCATCCAACCTCTTCCACCACGTTaGCATCCTTCAGTTAAAGGA +
Preference number: 2 (lower is better)
Translates to: LPNEGNTKLLWYDHRGIQPLPPR*HPSVKG
Trigger: TCCTTTAACTGAAGGATGCCAACGTGGTGGAAGAGG...TTGGATGCCTCTGTGATCATACCAGAGTAGTTTGGTGTTTCCCTCATTAGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
3UTR CAA 90 bp GATCAGGAATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATaGATGAAAGTAGGCCTTGACCTGAAACTGGCGAATTGCAGACAT +
Preference number: 2 (lower is better)
Translates to: DQEWHSGVRKLLGAI*MKVGLDLKLANCRH
Trigger: ATGTCTGCAATTCGCCAGTTTCAGGTCAAGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCATTCCTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR TCA 90 bp GACAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATGAAGCCCCATCACTCTaGTGGCTCTATCTCTTGCTC +
Preference number: 2 (lower is better)
Translates to: DNTTNGGVNSIGKDPLTNEAPSL*WLYLLL
Trigger: GAGCAAGAGATAGAGCCATCAGAGTGATGGGGCTTC...ATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR TCA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATACTTTACTTTCTGGGCTaGGTAGGTGAAACGGCGACC +
Preference number: 2 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFILYFLG*VGETAT
Trigger: GGTCGCCGTTTCACCTACTCAGCCCAGAAAGTAAAG...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR GCA 90 bp GTTTGCTATCAGAATAATTGGGGCCAGAGTCTGCCTTTATTGAAAGAAAATGTCGCCCCAGGCTCCGAGTaGATTTGCACCAGATGTAAT +
Preference number: 2 (lower is better)
Translates to: VCYQNNWGQSLPLLKENVAPGSE*ICTRCN
Trigger: ATTACATCTGGTGCAAATGCACTCGGAGCCTGGGGC...GACATTTTCTTTCAATAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTCCTCTGTTTCCTTCATaGCTTCATACAGTTTGTGTT +
Preference number: 2 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTPLFPS*LHTVCV
Trigger: AACACAAACTGTATGAAGCCATGAAGGAAACAGAGG...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTCAGCTAAATCAGCTCTaGACATCTGCTGGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILQLNQL*TSAGVR
Trigger: CCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTG...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp CAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTTGTTTGCTGCACAGTGTaGCAGAATCCCTGCCAGGTC +
Preference number: 2 (lower is better)
Translates to: QHNKWRCKFYWKRPSHQFVCCTV*QNPCQV
Trigger: GACCTGGCAGGGATTCTGCCACACTGTGCAGCAAAC...AAATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR GCA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATACAGAGGCACCCGAGTaGAGCTTTGTGAAGACAGGC +
Preference number: 2 (lower is better)
Translates to: VINLGISLSPWLKYICRNTEAPE*SFVKTG
Trigger: GCCTGTCTTCACAAAGCTGCACTCGGGTGCCTCTGT...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR GCA 90 bp GCACAGCAAATTAAAGAGATACCAAGCATTGAAGAGCAGCCAGAACGGAAAGGATTTACAGGAACCCGCTaGTTGATTGCTGTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: AQQIKEIPSIEEQPERKGFTGTR*LIAVSS
Trigger: AGAAGAAACAGCAATCAAGCAGCGGGTTCCTGTAAA...TCCTTTCCGTTCTGGCTGCTCTTCAATGCTTGGTATCTCTTTAATTTGCTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398304.5
3UTR-3UTR GCA 90 bp TCTGCAAGAACAGCACAGCAAATTAAAGAGATACCAAGCATTGAAGAGCAGCCAAGCCGCAGAGGAGGCTaGATTAAGAAAACTCAGATA +
Preference number: 2 (lower is better)
Translates to: SARTAQQIKEIPSIEEQPSRRGG*IKKTQI
Trigger: TATCTGAGTTTTCTTAATGCAGCCTCCTCTGCGGCT...TGGCTGCTCTTCAATGCTTGGTATCTCTTTAATTTGCTGTGCTGTTCTTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398304.5
3UTR-3UTR CCA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTCCTCTGTTTCCTTCATaGCTTCATACAGTTTGTGTT +
Preference number: 2 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLPLFPS*LHTVCV
Trigger: AACACAAACTGTATGAAGCCATGAAGGAAACAGAGG...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTTCTCATCTCATCTCTTaGGCAGAAAGCCCGTCAGAG +
Preference number: 2 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILSHLIS*AESPSE
Trigger: CTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGA...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp CAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTTCCAGAAATAAGGCGATaGGGCTTAGTCTGGGCATGC +
Preference number: 2 (lower is better)
Translates to: QHNKWRCKFYWKRPSHQFPEIRR*GLVWAC
Trigger: GCATGCCCAGACTAAGCCCCATCGCCTTATTTCTGG...AAATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR TCA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCAATTGTCTTTCCTTGTaGCTCTATCTCTTTGCTCTG +
Preference number: 2 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTNCLSL*LYLFAL
Trigger: CAGAGCAAAGAGATAGAGTCACAAGGAAAGACAATT...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR TCA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATAATGGCATGGCTTCAATaGGGAGGAAGAGGTTTGCTA +
Preference number: 2 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFIMAWLQ*GGRGLL
Trigger: TAGCAAACCTCTTCCTCCTCATTGAAGCCATGCCAT...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR GCA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCTTTTGTTCTTCTAAATaGTCTTCTGTCGTTGTCAGA +
Preference number: 2 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGFCSSK*SSVVVR
Trigger: TCTGACAACGACAGAAGAGCATTTAGAAGAACAAAA...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATGTTCATCCCTACACCTaGCACTTTGAGCAAACCAAA +
Preference number: 2 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHVHPYT*HFEQTK
Trigger: TTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAAC...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAAGTTCATCCCTACACCTaGCACTTTGAGCAAACCAAA +
Preference number: 2 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKVHPYT*HFEQTK
Trigger: TTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAAC...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTTCTCATCTCATCTCTTaGGCAGAAAGCCCGTCAGAG +
Preference number: 2 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVISHLIS*AESPSE
Trigger: CTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGA...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAAAAAGCTAATCCCAGGTaGAATCCCCTCCTGTCAGTG +
Preference number: 2 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQKANPR*NPLLSV
Trigger: CACTGACAGGAGGGGATTCCACCTGGGATTAGCTTT...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATAAATCCCTGCCAGGTCTaGATGTACCCCAGAAATAAG +
Preference number: 2 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFINPCQV*MYPRNK
Trigger: CTTATTTCTGGGGTACATCCAGACCTGGCAGGGATT...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CCA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCAAGCTGAGACCCCCGTaGTGCTACACATTGTACCAG +
Preference number: 2 (lower is better)
Translates to: NLGISLSPWLKYICRNLGKLRPP*CYTLYQ
Trigger: CTGGTACAATGTGTAGCACCACGGGGGTCTCAGCTT...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CCA 90 bp CATAGCAAAACAAATAGTAGCATATGTGTAAGTTCACCTTTGCCCACTGAATTCGCCTTTCACCTGGTGTaGTCAGTGGATTCGCATACA +
Preference number: 2 (lower is better)
Translates to: HSKTNSSICVSSPLPTEFAFHLV*SVDSHT
Trigger: TGTATGCGAATCCACTGACCACACCAGGTGAAAGGC...GAATTCAGTGGGCAAAGGTGAACTTACACATATGCTACTATTTGTTTTGCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472545.6
3UTR-3UTR GCA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCCTGATGAGGTTCGAGTaGTGGCAATTTTTCTTTAAA +
Preference number: 2 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTLMRFE*WQFFFK
Trigger: TTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAG...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR GCA 90 bp GAGTGCATTTGCACCAGATGTAATCTGGGTAACTTTCATGCCATTTCCATACAAACCCTCTCACCAATTTaGTTGGTGATTCTTCAAGCA +
Preference number: 2 (lower is better)
Translates to: ECICTRCNLGNFHAISIQTLSPI*LVILQA
Trigger: TGCTTGAAGAATCACCAAGCAAATTGGTGAGAGGGT...TTGTATGGAAATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR GCA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATGGCTCCGAGTGCATTTaGACCAGATGTAATCTGGGT +
Preference number: 2 (lower is better)
Translates to: VINLGISLSPWLKYICRNGSECI*TRCNLG
Trigger: ACCCAGATTACATCTGGTGCAAATGCACTCGGAGCC...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CCA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCAAAGCTAATCCCAGGTaGAATCCCCTCCTGTCAGTG +
Preference number: 2 (lower is better)
Translates to: NLGISLSPWLKYICRNLGKANPR*NPLLSV
Trigger: CACTGACAGGAGGGGATTCCACCTGGGATTAGCTTT...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CCA 90 bp CATAGCAAAACAAATAGTAGCATATGTGTAAGTTCACCTTTGCCCACTGAATTCACCTGGTGTGGTCAGTaGATTCGCATACAAGGTTTG +
Preference number: 2 (lower is better)
Translates to: HSKTNSSICVSSPLPTEFTWCGQ*IRIQGL
Trigger: CAAACCTTGTATGCGAATCCACTGACCACACCAGGT...GAATTCAGTGGGCAAAGGTGAACTTACACATATGCTACTATTTGTTTTGCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472545.6
3UTR CAA 90 bp TCTCTCTTCCTCAAAGAAATAGTGCATCTAGGAACAGATCTCTCATaGGCTCTAGTACCATCTCTGGATGTTACAAAACTCTCAGTTACT +
Preference number: 2 (lower is better)
Translates to: SLFLKEIVHLGTDLS*ALVPSLDVTKLSVT
Trigger: AGTAACTGAGAGTTTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGCACTATTTCTTTGAGGAAGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR CAA 90 bp TGCTGCAAAATACACCAGTTCATTGGAGCCATAGAGACATCAACATaGGGAAGTGCAAGACAACACAACAAATGGAGGTGTAAATTCTAT +
Preference number: 2 (lower is better)
Translates to: CCKIHQFIGAIETST*GSARQHNKWRCKFY
Trigger: ATAGAATTTACACCTCCATTTGTTGTGTTGTCTTGCACTTCCCAATGTTGATGTCTCTATGGCTCCAATGAACTGGTGTATTTTGCAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CAA 90 bp TACTCTTTAGATGATCTTTGTCTAAATTGTCCGCCTGTCTTAGCTTaGTCCTCAGCTGTTACAAGAAACTGCACAGCTGTACAAGAAATG +
Preference number: 2 (lower is better)
Translates to: YSLDDLCLNCPPVLA*SSAVTRNCTAVQEM
Trigger: CATTTCTTGTACAGCTGTGCAGTTTCTTGTAACAGCTGAGGACAAAGCTAAGACAGGCGGACAATTTAGACAAAGATCATCTAAAGAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAAGTTCATCCCTACACCTaGCACTTTGAGCAAACCAAA +
Preference number: 2 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQVHPYT*HFEQTK
Trigger: TTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAAC...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR CAA 90 bp CCGCGAAAACATCTACTCATTAATGACAGTCTTTTAAATAAATGGTaGCATGCTCAGTTGAGAAACCAAAGAAGTTATCGTGGTGGCCTA +
Preference number: 2 (lower is better)
Translates to: PRKHLLINDSLLNKW*HAQLRNQRSYRGGL
Trigger: TAGGCCACCACGATAACTTCTTTGGTTTCTCAACTGAGCATGCAACCATTTATTTAAAAGACTGTCATTAATGAGTAGATGTTTTCGCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR TCA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATAAGAGTCTGCCTTTATTaGAAGAAAATGTCCTCAGAG +
Preference number: 2 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFIRVCLY*KKMSSE
Trigger: CTCTGAGGACATTTTCTTTCAATAAAGGCAGACTCT...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CCA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATACCTCTGTTTCCTTCATaGCTTCATACAGTTTGTGTT +
Preference number: 2 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFIPLFPS*LHTVCV
Trigger: AACACAAACTGTATGAAGCCATGAAGGAAACAGAGG...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CCA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTATGAGGTTCGAGTGCTaGCAATTTTTCTTTAAAGCA +
Preference number: 2 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEIMRFEC*QFFFKA
Trigger: TGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCAT...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CCA 90 bp CAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTTAAGAAGTTATCGTGGTaGCCTAAAAATAGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: QHNKWRCKFYWKRPSHQFKKLSW*PKNRAG
Trigger: CCCAGCTCTATTTTTAGGCCACCACGATAACTTCTT...AAATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR TCA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTTTCCAAAAATATCCATaGGGGCAACTCATTAAGGGA +
Preference number: 2 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVIFQKYP*GQLIKG
Trigger: TCCCTTAATGAGTTGCCCTCATGGATATTTTTGGAA...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR GCA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATACTGATGAGGTTCGAGTaGTGGCAATTTTTCTTTAAA +
Preference number: 2 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFILMRFE*WQFFFK
Trigger: TTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAG...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CAA 90 bp CTACTCATTAATGACAGTCTTTTAAATAAATGGTTGCATGCTCAGTaGAGAAACCAAAGAAGTTATCGTGGTGGCCTAAAAATAGAGCTG +
Preference number: 2 (lower is better)
Translates to: LLINDSLLNKWLHAQ*RNQRSYRGGLKIEL
Trigger: CAGCTCTATTTTTAGGCCACCACGATAACTTCTTTGGTTTCTCAACTGAGCATGCAACCATTTATTTAAAAGACTGTCATTAATGAGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR TCA 90 bp CATAGCAAAACAAATAGTAGCATATGTGTAAGTTCACCTTTGCCCACTGAATTCTGTAGTTCTTATTTATaGTGTGACAGACCAGTGATC +
Preference number: 2 (lower is better)
Translates to: HSKTNSSICVSSPLPTEFCSSYL*CDRPVI
Trigger: GATCACTGGTCTGTCACATCATAAATAAGAACTACA...GAATTCAGTGGGCAAAGGTGAACTTACACATATGCTACTATTTGTTTTGCTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472545.6
3UTR-3UTR GCA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATCAACAAAAGGGAGAGTaGAACTTTCAGGTCTTGAAT +
Preference number: 2 (lower is better)
Translates to: VINLGISLSPWLKYICRNQQKGE*NFQVLN
Trigger: ATTCAAGACCTGAAAGTTGCACTCTCCCTTTTGTTG...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CCA 90 bp GACAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTACAAAACCAAGGGTTaGTGGTTCAATTTGATTGTA +
Preference number: 2 (lower is better)
Translates to: DNTTNGGVNSIGKDPLTNYKTKG*WFNLIV
Trigger: TACAATCAAATTGAACCACCAACCCTTGGTTTTGTA...ATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR TCA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATATGTTTAGCGTAAGATaGACAATGCCTGTTTTTGGA +
Preference number: 2 (lower is better)
Translates to: VINLGISLSPWLKYICRNMFSVR*TMPVFG
Trigger: TCCAAAAACAGGCATTGTTCATCTTACGCTAAACAT...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR GCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAATTTTGTTCTTCTAAATaGTCTTCTGTCGTTGTCAGA +
Preference number: 2 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQFCSSK*SSVVVR
Trigger: TCTGACAACGACAGAAGAGCATTTAGAAGAACAAAA...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR GCA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATAGGACTATGGGAAGATaGATAATTTTGCATTTCTGT +
Preference number: 2 (lower is better)
Translates to: VINLGISLSPWLKYICRNRTMGR*IILHFC
Trigger: ACAGAAATGCAAAATTATGCATCTTCCCATAGTCCT...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR GCA 72 bp AGGCGCCGGCAGGGCCCACAGCACATGCATCATCGCTaGCAGGGCAACGGTGCAGGCTGGCTCCGGGAGGCG +
Preference number: 3 (lower is better)
Translates to: RRRQGPQHMHHR*QGNGAGWLREA
Trigger: CGCCTCCCGGAGCCAGCCTGCACCGTTGCCCTGGCAGCGATGATGCATGTGCTGTGGGCCCTGCCGGCGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR GCA 72 bp CAGAGGCACTCAGGCGCCGGCAGGGCCCACAGCACATaGATCATCGCTGCCAGGGCAACGGTGCAGGCTGGC +
Preference number: 3 (lower is better)
Translates to: QRHSGAGRAHST*IIAARATVQAG
Trigger: GCCAGCCTGCACCGTTGCCCTGGCAGCGATGATGCATGTGCTGTGGGCCCTGCCGGCGCCTGAGTGCCTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CAA 90 bp GGAGGCGGGCTGGAGCAGGCTCCAGGTCAGGGCCTCACGCTCAGCTTTACTTTCCTCTCATCTCATCTCTaGGGCAGAAAGCCCGTCAGA +
Preference number: 3 (lower is better)
Translates to: GGGLEQAPGQGLTLSFTFLSSHL*GRKPVR
Trigger: TCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAG...GAAAGTAAAGCTGAGCGTGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR GCA 72 bp CTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTGCTaGACAGTGTGGCAGAATCCCTGCCAGGTCTGGATG +
Preference number: 3 (lower is better)
Translates to: LLLSYPAYMLVC*TVWQNPCQVWM
Trigger: CATCCAGACCTGGCAGGGATTCTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR GCA 72 bp CAAGCCTTCAGGTTGGAGAGAGCTCTGGACAAAGTTTaGAGTGTTAGCACCAGTCTGGCCCCAGGCTCCGAG +
Preference number: 3 (lower is better)
Translates to: QAFRLERALDKV*SVSTSLAPGSE
Trigger: CTCGGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTCCAACCTGAAGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 72 bp TCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTaGCAGAATCCCTGCCAGGTCTGGATGTACCCCAGA +
Preference number: 3 (lower is better)
Translates to: SYPAYMLVCCTV*QNPCQVWMYPR
Trigger: TCTGGGGTACATCCAGACCTGGCAGGGATTCTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR CCA 72 bp GGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTaGTTTGCTGCACAGTGTGGCAGAATCCCTGCCAGG +
Preference number: 3 (lower is better)
Translates to: GSISCSPTQPTC*FAAQCGRIPAR
Trigger: CCTGGCAGGGATTCTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR GCA 72 bp GATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATaGTGGTTTGCTGCACAGTGTGGCAGAATCCCTGCC +
Preference number: 3 (lower is better)
Translates to: DGSISCSPTQPT*WFAAQCGRIPA
Trigger: GGCAGGGATTCTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR GCA 72 bp CTAGGCAAGGAGTATTCCCACCTCCCTCCCATCCTGTaGTACAGCTCGGTGGAGAAACATCCTGTCAGAGAG +
Preference number: 3 (lower is better)
Translates to: LGKEYSHLPPIL*YSSVEKHPVRE
Trigger: CTCTCTGACAGGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCCTTGCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 72 bp GAGAGCTCTGCAGCTAAATCAGCTCTGGACATCTGCTaGGGTGAGGAGGCTCTCATCTCATCTCTTGGGCAG +
Preference number: 3 (lower is better)
Translates to: ESSAAKSALDIC*GEEALISSLGQ
Trigger: CTGCCCAAGAGATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR CCA 72 bp CCTGCCAGGTCTGGATGTACCCCAGAAATAAGGCGATaGGGCTTAGTCTGGGCATGCACAGAACCCAGAGTA +
Preference number: 3 (lower is better)
Translates to: PARSGCTPEIRR*GLVWACTEPRV
Trigger: TACTCTGGGTTCTGTGCATGCCCAGACTAAGCCCCATCGCCTTATTTCTGGGGTACATCCAGACCTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CAA 90 bp GGAGGCGGGCTGGAGCAGGCTCCAGGTCAGGGCCTCACGCTCAGCTTTACTTTCGTGAGGAAGAAGTCTTaGTCAGACTTAAAAGGAACT +
Preference number: 3 (lower is better)
Translates to: GGGLEQAPGQGLTLSFTFVRKKS*SDLKGT
Trigger: AGTTCCTTTTAAGTCTGACAAAGACTTCTTCCTCAC...GAAAGTAAAGCTGAGCGTGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 72 bp GTTTGCTGCACAGTGTGGCAGAATCCCTGCCAGGTCTaGATGTACCCCAGAAATAAGGCGATGGGGCTTAGT +
Preference number: 3 (lower is better)
Translates to: VCCTVWQNPCQV*MYPRNKAMGLS
Trigger: ACTAAGCCCCATCGCCTTATTTCTGGGGTACATCCAGACCTGGCAGGGATTCTGCCACACTGTGCAGCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR CCA 72 bp GAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTaGCCCCAGGCTCCGAGTGCATTTGCACCAGATGTA +
Preference number: 3 (lower is better)
Translates to: ELWTKFAVLAPV*PQAPSAFAPDV
Trigger: TACATCTGGTGCAAATGCACTCGGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 72 bp GCTGCTGATAGGGACACTGATGAAAGCTCATGGAGCTaGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTA +
Preference number: 3 (lower is better)
Translates to: AADRDTDESSWS*GRTPPSFFSRV
Trigger: TACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGAGCTTTCATCAGTGTCCCTATCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531015.5
3UTR GCA 72 bp GTGAAGAAGCCCCATCACTCTGATGGCTCTATCTCTTaGTCTCCTACCCAGCCTACATGCTGGTTTGCTGCA +
Preference number: 3 (lower is better)
Translates to: VKKPHHSDGSIS*SPTQPTCWFAA
Trigger: TGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGGGCTTCTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CAA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCGGTTGGTGGTTCAATTaGATTGTACTTAGCCACAGC +
Preference number: 3 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSGWWFN*IVLSHS
Trigger: GCTGTGGCTAAGTACAATCAAATTGAACCACCAACC...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CAA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGCCTACACCTGGCACTTaGAGCAAACCAAAGCCTTCC +
Preference number: 3 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKPTPGT*SKPKPS
Trigger: GGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CAA 90 bp GAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCAGAAAGGCAGTTCAGTaGGTTGAGCTCAAAGTCATT +
Preference number: 3 (lower is better)
Translates to: ERALDKVCSVSTSLAPGSRKAVQ*VELKVI
Trigger: AATGACTTTGAGCTCAACCAACTGAACTGCCTTTCT...GGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CAA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCATAGAGACATCAACATaGGGAAGTGCAAGACAACAC +
Preference number: 3 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSIETST*GSARQH
Trigger: GTGTTGTCTTGCACTTCCCAATGTTGATGTCTCTAT...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CAA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCCATGCTTCAAGGGAATaGATCTTTTTCCCTCTAGGA +
Preference number: 3 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSHASRE*IFFPLG
Trigger: TCCTAGAGGGAAAAAGATCAATTCCCTTGAAGCATG...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR TCA 72 bp CTCCGATGTTCTTACTGTGAAGAAGCCCCATCACTCTaGTGGCTCTATCTCTTGCTCTCCTACCCAGCCTAC +
Preference number: 3 (lower is better)
Translates to: LRCSYCEEAPSL*WLYLLLSYPAY
Trigger: GTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGGGCTTCTTCACAGTAAGAACATCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR GCA 72 bp GTTAGCACCAGTCTGGCCCCAGGCTCCGAGTGCATTTaGACCAGATGTAATCTGGGTAACTTTCATGCCATT +
Preference number: 3 (lower is better)
Translates to: VSTSLAPGSECI*TRCNLGNFHAI
Trigger: AATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTCGGAGCCTGGGGCCAGACTGGTGCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR GCA 72 bp TGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCGAGTaGATTTGCACCAGATGTAATCTGGGTAACTTTCAT +
Preference number: 3 (lower is better)
Translates to: CSVSTSLAPGSE*ICTRCNLGNFH
Trigger: ATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTCGGAGCCTGGGGCCAGACTGGTGCTAACACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 72 bp TGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTaGCACTTTGAGCAAACCAAAGCCTTCCTTCATACT +
Preference number: 3 (lower is better)
Translates to: WAESPSEVHPYT*HFEQTKAFLHT
Trigger: AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR CCA 72 bp CAAAAGACACAGAGAGCTCTGCAGCTAAATCAGCTCTaGACATCTGCTGGGGTGAGGAGGCTCTCATCTCAT +
Preference number: 3 (lower is better)
Translates to: QKTQRALQLNQL*TSAGVRRLSSH
Trigger: ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGCTCTCTGTGTCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CAA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTCTCTCATCTCATCTCTaGGGCAGAAAGCCCGTCAGA +
Preference number: 3 (lower is better)
Translates to: PITDVGNGKADEVRVLAILSSHL*GRKPVR
Trigger: TCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAG...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR TCA 72 bp AAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTaGGCAAACCAAAGCCTTCCTTCATACTGCAATGTC +
Preference number: 3 (lower is better)
Translates to: KPVRGSSLHLAL*ANQSLPSYCNV
Trigger: GACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR GCA 72 bp ACCCCAGAAATAAGGCGATGGGGCTTAGTCTGGGCATaGACAGAACCCAGAGTAGAGTGGTTATTATCACTG +
Preference number: 3 (lower is better)
Translates to: TPEIRRWGLVWA*TEPRVEWLLSL
Trigger: CAGTGATAATAACCACTCTACTCTGGGTTCTGTGCATGCCCAGACTAAGCCCCATCGCCTTATTTCTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR GCA 72 bp AGAAGAAAAGTCTGCCATCCCATTGGGAGTCAACCTTaGCACTTGGTTGTCTGTCCTCATGAGTTGCTAGGG +
Preference number: 3 (lower is better)
Translates to: RRKVCHPIGSQP*HLVVCPHELLG
Trigger: CCCTAGCAACTCATGAGGACAGACAACCAAGTGGCAAGGTTGACTCCCAATGGGATGGCAGACTTTTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 72 bp GGATGTACCCCAGAAATAAGGCGATGGGGCTTAGTCTaGGCATGCACAGAACCCAGAGTAGAGTGGTTATTA +
Preference number: 3 (lower is better)
Translates to: GCTPEIRRWGLV*ACTEPRVEWLL
Trigger: TAATAACCACTCTACTCTGGGTTCTGTGCATGCCCAGACTAAGCCCCATCGCCTTATTTCTGGGGTACATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CAA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCCCTAATTACTCATTGTaGGCCAAAATGCTAAATGGT +
Preference number: 3 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSPNYSL*AKMLNG
Trigger: ACCATTTAGCATTTTGGCCAACAATGAGTAATTAGG...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CAA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCTACAAGTCATCAGATTaGCTGCAAAATACACCAGTT +
Preference number: 3 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSYKSSD*LQNTPV
Trigger: AACTGGTGTATTTTGCAGCAAATCTGATGACTTGTA...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CAA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCGGAACAGATCTCTCATaGGCTCTAGTACCATCTCTG +
Preference number: 3 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGGTDLS*ALVPSL
Trigger: CAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCC...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CAA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCCCTACACCTGGCACTTaGAGCAAACCAAAGCCTTCC +
Preference number: 3 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFPTPGT*SKPKPS
Trigger: GGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CAA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTCCTAATTACTCATTGTaGGCCAAAATGCTAAATGGT +
Preference number: 3 (lower is better)
Translates to: PITLMALSLALLPSLHAGPNYSL*AKMLNG
Trigger: ACCATTTAGCATTTTGGCCAACAATGAGTAATTAGG...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CAA 90 bp AAGATACAATCATTGACCCTGAGTCTGCCATCCTCTGCTGCAGCACCTCCTGGTTCCAAAGTATCTGTGTaGACAATTATAGGAGCAGGA +
Preference number: 3 (lower is better)
Translates to: KIQSLTLSLPSSAAAPPGSKVSV*TIIGAG
Trigger: TCCTGCTCCTATAATTGTCAACACAGATACTTTGGA...ACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTCAGGGTCAATGATTGTATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529401.5
3UTR GCA 72 bp AAACGGCGACCTAAAGTATTTGTGTCATTAGTCCAGTaGATGGACTTGCTGTCTGAATCAGCCATGAGCCCT +
Preference number: 3 (lower is better)
Translates to: KRRPKVFVSLVQ*MDLLSESAMSP
Trigger: AGGGCTCATGGCTGATTCAGACAGCAAGTCCATGCACTGGACTAATGACACAAATACTTTAGGTCGCCGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 72 bp CCCCAGGCTCCGAGTGCATTTGCACCAGATGTAATCTaGGTAACTTTCATGCCATTTCCATACAAGTCATCA +
Preference number: 3 (lower is better)
Translates to: PQAPSAFAPDVI*VTFMPFPYKSS
Trigger: TGATGACTTGTATGGAAATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTCGGAGCCTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 72 bp ACTCAAAAAGGAGAGAAGAAAAGTCTGCCATCCCATTaGGAGTCAACCTTGCCACTTGGTTGTCTGTCCTCA +
Preference number: 3 (lower is better)
Translates to: TQKGEKKSLPSH*ESTLPLGCLSS
Trigger: TGAGGACAGACAACCAAGTGGCAAGGTTGACTCCCAATGGGATGGCAGACTTTTCTTCTCTCCTTTTTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CAA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGAAGTTATTCAACTATTaGCATGGCAGGCTCAGGTTA +
Preference number: 3 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKKLFNY*HGRLRL
Trigger: TAACCTGAGCCTGCCATGCAAATAGTTGAATAACTT...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR CCA 72 bp GTTGCATGCTCAGTTGAGAAACCAAAGAAGTTATCGTaGTGGCCTAAAAATAGAGCTGGGATCAGGAATGGC +
Preference number: 3 (lower is better)
Translates to: VACSVEKPKKLS*WPKNRAGIRNG
Trigger: GCCATTCCTGATCCCAGCTCTATTTTTAGGCCACCACGATAACTTCTTTGGTTTCTCAACTGAGCATGCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 72 bp TGGCCAAAATTGATCTTCAGTCCTCTTCCACCACGTTaGCATCCTTCAGTTAAAGGAACAACAGCCTTTCAC +
Preference number: 3 (lower is better)
Translates to: WPKLIFSPLPPR*HPSVKGTTAFH
Trigger: GTGAAAGGCTGTTGTTCCTTTAACTGAAGGATGCCAACGTGGTGGAAGAGGACTGAAGATCAATTTTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472545.6
3UTR-3UTR CAA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCAAGTTATTCAACTATTaGCATGGCAGGCTCAGGTTA +
Preference number: 3 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGKLFNY*HGRLRL
Trigger: TAACCTGAGCCTGCCATGCAAATAGTTGAATAACTT...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CAA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGAGAAAGGCAGTTCAGTaGGTTGAGCTCAAAGTCATT +
Preference number: 3 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGRKAVQ*VELKVI
Trigger: AATGACTTTGAGCTCAACCAACTGAACTGCCTTTCT...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CAA 90 bp GCAATGCCTCAAATCCTTTTCATGGTAGGAGATAGCTCAGGGGTATCTCCTGCCGCAGAGGGATACTCCTaGTATATGAAACAGATATTA +
Preference number: 3 (lower is better)
Translates to: AMPQILFMVGDSSGVSPAAEGYS*YMKQIL
Trigger: TAATATCTGTTTCATATACAAGGAGTATCCCTCTGC...GGCAGGAGATACCCCTGAGCTATCTCCTACCATGAAAAGGATTTGAGGCATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
3UTR GCA 72 bp CAAGATACAATCATTGACCCTGAGTCTGCCATCCTCTaGTGCAGCACCTCCTGGTATAATCTTCGTAATAAA +
Preference number: 3 (lower is better)
Translates to: QDTIIDPESAIL*CSTSWYNLRNK
Trigger: TTTATTACGAAGATTATACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTCAGGGTCAATGATTGTATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529401.5
3UTR CCA 72 bp GCATGCTCAGTTGAGAAACCAAAGAAGTTATCGTGGTaGCCTAAAAATAGAGCTGGGATCAGGAATGGCATT +
Preference number: 3 (lower is better)
Translates to: ACSVEKPKKLSW*PKNRAGIRNGI
Trigger: AATGCCATTCCTGATCCCAGCTCTATTTTTAGGCCACCACGATAACTTCTTTGGTTTCTCAACTGAGCATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 72 bp CCTTCAGTTAAAGGAACAACAGCCTTTCACCTGGTGTaGTCAGTGGATTCGCATACAAGGTTTGTAGTTCTT +
Preference number: 3 (lower is better)
Translates to: PSVKGTTAFHLV*SVDSHTRFVVL
Trigger: AAGAACTACAAACCTTGTATGCGAATCCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAACTGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
3UTR-3UTR CAA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTCTCTCATCTCATCTCTaGGGCAGAAAGCCCGTCAGA +
Preference number: 3 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVILSSHL*GRKPVR
Trigger: TCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAG...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR-3UTR CAA 90 bp GAGTGCATTTGCACCAGATGTAATCTGGGTAACTTTCATGCCATTTCCATACAAGGAACAGATCTCTCATaGGCTCTAGTACCATCTCTG +
Preference number: 3 (lower is better)
Translates to: ECICTRCNLGNFHAISIQGTDLS*ALVPSL
Trigger: CAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCC...TTGTATGGAAATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CAA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTGTGTGAAGGTGACATaGCACCCCCAGCAAGCCTTC +
Preference number: 3 (lower is better)
Translates to: VINLGISLSPWLKYICRNCVKVT*HPQQAF
Trigger: GAAGGCTTGCTGGGGGTGCAATGTCACCTTCACACA...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR TCA 72 bp ATTTGTGTCATTAGTCCAGTGCATGGACTTGCTGTCTaGATCAGCCATGAGCCCTTTAGAGGACAGAAAAAT +
Preference number: 3 (lower is better)
Translates to: ICVISPVHGLAV*ISHEPFRGQKN
Trigger: ATTTTTCTGTCCTCTAAAGGGCTCATGGCTGATTCAGACAGCAAGTCCATGCACTGGACTAATGACACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR TCA 72 bp CTCTCAGGAGAACCCAGGGTTTTACATCAAAATGGGTaGAGCAGAGGGATACTCCTTGTATATGAAACAGAT +
Preference number: 3 (lower is better)
Translates to: LSGEPRVLHQNG*SRGILLVYETD
Trigger: ATCTGTTTCATATACAAGGAGTATCCCTCTGCTTCACCCATTTTGATGTAAAACCCTGGGTTCTCCTGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
3UTR GCA 72 bp GATACAATCATTGACCCTGAGTCTGCCATCCTCTGCTaGAGCACCTCCTGGTATAATCTTCGTAATAAATAT +
Preference number: 3 (lower is better)
Translates to: DTIIDPESAILC*STSWYNLRNKY
Trigger: ATATTTATTACGAAGATTATACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTCAGGGTCAATGATTGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529401.5
3UTR CCA 72 bp GCAAAAGCAATGCTGATGTCGCCATCCACTCTAAAGTaGGAAACCAACTCTTCTAGTTCAGTTTATAGGCTT +
Preference number: 3 (lower is better)
Translates to: AKAMLMSPSTLK*ETNSSSSVYRL
Trigger: AAGCCTATAAACTGAACTAGAAGAGTTGGTTTCCCACTTTAGAGTGGATGGCGACATCAGCATTGCTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR CCA 72 bp GGCCTAAAAATAGAGCTGGGATCAGGAATGGCATTCTaGTGTCAGAAAACTTCTGGGAGCAATATTGATGAA +
Preference number: 3 (lower is better)
Translates to: GLKIELGSGMAF*CQKTSGSNIDE
Trigger: TTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCATTCCTGATCCCAGCTCTATTTTTAGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CAA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATGTCCAGTGCATGGACTaGCTGTCTGAATCAGCCATG +
Preference number: 3 (lower is better)
Translates to: VINLGISLSPWLKYICRNVQCMD*LSESAM
Trigger: CATGGCTGATTCAGACAGCAAGTCCATGCACTGGAC...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR TCA 72 bp AAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTTaGCCTGAAACTGGCGAATTGCAGACATGGACATAT +
Preference number: 3 (lower is better)
Translates to: KTSGSNIDESRP*PETGELQTWTY
Trigger: ATATGTCCATGTCTGCAATTCGCCAGTTTCAGGTCAAGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CCA 72 bp AATTTGATTGTACTTAGCCACAGCAACACTAGTAAATaGAAAGCACATCACACGACCCGCGAAAACATCTAC +
Preference number: 3 (lower is better)
Translates to: NLIVLSHSNTSK*KAHHTTRENIY
Trigger: GTAGATGTTTTCGCGGGTCGTGTGATGTGCTTTCCATTTACTAGTGTTGCTGTGGCTAAGTACAATCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CAA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATACCTGAAACTGGCGAATaGCAGACATGGACATATCTT +
Preference number: 3 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFIPETGE*QTWTYL
Trigger: AAGATATGTCCATGTCTGCAATTCGCCAGTTTCAGG...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CAA 90 bp GACAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATGGTTGGTGGTTCAATTaGATTGTACTTAGCCACAGC +
Preference number: 3 (lower is better)
Translates to: DNTTNGGVNSIGKDPLTNGWWFN*IVLSHS
Trigger: GCTGTGGCTAAGTACAATCAAATTGAACCACCAACC...ATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CAA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATACCGTGGTGCTACACATaGTACCAGAGCATGAAAAAT +
Preference number: 3 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFIPWCYT*YQSMKN
Trigger: ATTTTTCATGCTCTGGTACAATGTGTAGCACCACGG...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CAA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAACCTAATTACTCATTGTaGGCCAAAATGCTAAATGGT +
Preference number: 3 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKPNYSL*AKMLNG
Trigger: ACCATTTAGCATTTTGGCCAACAATGAGTAATTAGG...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
3UTR CCA 72 bp TTCAATGAGGAGGAAGAGGTTTGCTATCAGAATAATTaGGGCCAGAGTCTGCCTTTATTGAAAGAAAATGTC +
Preference number: 3 (lower is better)
Translates to: FNEEEEVCYQNN*GQSLPLLKENV
Trigger: GACATTTTCTTTCAATAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCAAACCTCTTCCTCCTCATTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CAA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATCCTGAAACTGGCGAATaGCAGACATGGACATATCTT +
Preference number: 3 (lower is better)
Translates to: VINLGISLSPWLKYICRNPETGE*QTWTYL
Trigger: AAGATATGTCCATGTCTGCAATTCGCCAGTTTCAGG...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CAA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCCTTCTGGGAGCAATATaGATGAAAGTAGGCCTTGAC +
Preference number: 3 (lower is better)
Translates to: NLGISLSPWLKYICRNLGLLGAI*MKVGLD
Trigger: GTCAAGGCCTACTTTCATCAATATTGCTCCCAGAAG...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CAA 90 bp GTTTGCTATCAGAATAATTGGGGCCAGAGTCTGCCTTTATTGAAAGAAAATGTCCTACAAAACCAAGGGTaGGTGGTTCAATTTGATTGT +
Preference number: 3 (lower is better)
Translates to: VCYQNNWGQSLPLLKENVLQNQG*VVQFDC
Trigger: ACAATCAAATTGAACCACCAACCCTTGGTTTTGTAG...GACATTTTCTTTCAATAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CAA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATAATGGAATTTTGATTTaGGTAAAGCTGAGACCCCCG +
Preference number: 3 (lower is better)
Translates to: VINLGISLSPWLKYICRNNGILI*VKLRPP
Trigger: CGGGGGTCTCAGCTTTACCAAAATCAAAATTCCATT...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR-3UTR CAA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAACACGGTTCACGTTCTTaGGACATGAACCATCAATTT +
Preference number: 3 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKHGSRS*DMNHQF
Trigger: AAATTGATGGTTCATGTCCAAAGAACGTGAACCGTG...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398301.6
3UTR-3UTR CAA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCCTCTCACCAATTTGCTaGGTGATTCTTCAAGCAAAT +
Preference number: 3 (lower is better)
Translates to: NLGISLSPWLKYICRNLGLSPIC*VILQAN
Trigger: ATTTGCTTGAAGAATCACCAAGCAAATTGGTGAGAG...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR TCA 72 bp TATATTACTACAAAACCAAGGGTTGGTGGTTCAATTTaGTTGTACTTAGCCACAGCAACACTAGTAAATGGA +
Preference number: 3 (lower is better)
Translates to: YITTKPRVGGSI*LYLATATLVNG
Trigger: TCCATTTACTAGTGTTGCTGTGGCTAAGTACAATCAAATTGAACCACCAACCCTTGGTTTTGTAGTAATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GGAGGCGGGCTGGAGCAGGCTCCAGGTCAGGGCCTCACGCTCAGCTTTACTTTCCACATGCATCATCGCTaGCAGGGCAACGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GGGLEQAPGQGLTLSFTFHMHHR*QGNGAG
Trigger: GCCTGCACCGTTGCCCTGGCAGCGATGATGCATGTG...GAAAGTAAAGCTGAGCGTGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCGGGTGGGCGCACTCCTaGCGGCATCCATCCCATCGG +
Preference number: 4 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSGWAHS*RHPSHR
Trigger: CCGATGGGATGGATGCCGTCAGGAGTGCGCCCACCC...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR CCA 90 bp GGAGGCGGGCTGGAGCAGGCTCCAGGTCAGGGCCTCACGCTCAGCTTTACTTTCACCCAGCCTACATGCTaGTTTGCTGCACAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GGGLEQAPGQGLTLSFTFTQPTC*FAAQCG
Trigger: GCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGT...GAAAGTAAAGCTGAGCGTGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTCTCCGGGAGGCGGGCTaGAGCAGGCTCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPLREAG*SRLQVR
Trigger: CCTGACCTGGAGCCTGCTCCAGCCCGCCTCCCGGAG...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCCCTGGCTCGGAGTCCTaGAGGGCCGGCAGTAGGATC +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTPGSES*RAGSRI
Trigger: GATCCTACTGCCGGCCCTTCAGGACTCCGAGCCAGG...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GGGTATCTCCTGCCCATGGTTTTGGGTAGGGCTGGTGGGAACCTGGGAGCTGGCCGGACCCGGAGCTCATaGTGTGGTTCATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: GYLLPMVLGRAGGNLGAGRTRSS*CGSSSA
Trigger: AGCAGATGATGAACCACAGCATGAGCTCCGGGTCCG...GCCAGCTCCCAGGTTCCCACCAGCCCTACCCAAAACCATGGGCAGGAGATACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCGGCAACGGTGCAGGCTaGCTCCGGGAGGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFGNGAG*LREAGW
Trigger: CCAGCCCGCCTCCCGGAGCCAGCCTGCACCGTTGCC...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCGGGGTCTCCCTTCCCTaGGGAACGAGGCGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAGVSLP*GTRRVG
Trigger: CCCCACACGCCTCGTTCCCCAGGGAAGGGAGACCCC...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR TCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCCCCACCGACAATGTTaGAGCCCAGGCCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSPHRQC*SPGQWS
Trigger: GCTCCACTGGCCTGGGCTTCAACATTGTCGGTGGGG...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTAGTGCAGCAGCTGCCTaGTCGTGGGATGCACCACGG +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPSAAAA*SWDAPR
Trigger: CCGTGGTGCATCCCACGAGCAGGCAGCTGCTGCACT...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTGCAGCTGCCTGCTCGTaGGATGCACCACGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSAAACS*DAPRRS
Trigger: TGACCTCCGTGGTGCATCCCACGAGCAGGCAGCTGC...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GGAGGCGGGCTGGAGCAGGCTCCAGGTCAGGGCCTCACGCTCAGCTTTACTTTCACTAAGTCCTTGACTTaGCAGCCCACTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GGGLEQAPGQGLTLSFTFTKSLT*QPTVLA
Trigger: AGCAAGGACAGTGGGCTGCCAAGTCAAGGACTTAGT...GAAAGTAAAGCTGAGCGTGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCTCCGGGAGGCGGGCTaGAGCAGGCTCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFLREAG*SRLQVR
Trigger: CCTGACCTGGAGCCTGCTCCAGCCCGCCTCCCGGAG...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATAGGCAACGGTGCAGGCTaGCTCCGGGAGGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFIGNGAG*LREAGW
Trigger: CCAGCCCGCCTCCCGGAGCCAGCCTGCACCGTTGCC...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCGGCAACGGTGCAGGCTaGCTCCGGGAGGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGGNGAG*LREAGW
Trigger: CCAGCCCGCCTCCCGGAGCCAGCCTGCACCGTTGCC...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATATCCGGGCTGCGGCAGTaGCAGCTCGCTGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFISGLRQ*QLAGGP
Trigger: GGGTCCCCCAGCGAGCTGCCACTGCCGCAGCCCGGA...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR GCA 90 bp AGCTCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTTGCCTGCTCGTGGGATaGACCACGGAGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: SSWSWGRTPPSFFSRVTACLLVG*TTEVNA
Trigger: GGCATTGACCTCCGTGGTGCATCCCACGAGCAGGCA...AGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp GGAGGCGGGCTGGAGCAGGCTCCAGGTCAGGGCCTCACGCTCAGCTTTACTTTCCAAAGTGATAGTCTCTaGCATCCACCTCGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: GGGLEQAPGQGLTLSFTFQSDSL*HPPRSL
Trigger: GAGACTACGAGGTGGATGGCAGAGACTATCACTTTG...GAAAGTAAAGCTGAGCGTGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCACATGCATCATCGCTaGCAGGGCAACGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSHMHHR*QGNGAG
Trigger: GCCTGCACCGTTGCCCTGGCAGCGATGATGCATGTG...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCAGGGCCCACAGCACATaGATCATCGCTGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSRAHST*IIAARA
Trigger: TGCCCTGGCAGCGATGATGCATGTGCTGTGGGCCCT...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCAGGGCCCACAGCACATaGATCATCGCTGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTRAHST*IIAARA
Trigger: TGCCCTGGCAGCGATGATGCATGTGCTGTGGGCCCT...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTCGATCACTGCCCCCTaGACCCGCCGTGGCCATCCC +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLSITAP*TRRGHP
Trigger: GGGATGGCCACGGCGGGTGCAGGGGGCAGTGATCGA...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR CCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCGCAGCTGCCTGCTCGTaGGATGCACCACGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAAAACS*DAPRRS
Trigger: TGACCTCCGTGGTGCATCCCACGAGCAGGCAGCTGC...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GGAGGCGGGCTGGAGCAGGCTCCAGGTCAGGGCCTCACGCTCAGCTTTACTTTCAATCCCTGCCAGGTCTaGATGTACCCCAGAAATAAG +
Preference number: 4 (lower is better)
Translates to: GGGLEQAPGQGLTLSFTFNPCQV*MYPRNK
Trigger: CTTATTTCTGGGGTACATCCAGACCTGGCAGGGATT...GAAAGTAAAGCTGAGCGTGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTCTCCGGGAGGCGGGCTaGAGCAGGCTCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTLREAG*SRLQVR
Trigger: CCTGACCTGGAGCCTGCTCCAGCCCGCCTCCCGGAG...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATCCCGGAGCCCCGGTaGAAGCAACGCCGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFIPEPR*KQRRGQ
Trigger: TTGCCCGCGGCGTTGCTTCCACCGGGGCTCCGGGAT...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR CCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTTGCTCGCCGGGCACATaGAGCGACAGCCTAGACCGA +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPCSPGT*SDSLDR
Trigger: TCGGTCTAGGCTGTCGCTCCATGTGCCCGGCGAGCA...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR GCA 90 bp GAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCCCGAACGATAGACCCTaGTTCCTTCAGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: ERALDKVCSVSTSLAPGSPNDRP*FLQGFH
Trigger: GTGGAAGCCCTGAAGGAAGCAGGGTCTATCGTTCGG...GGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR GCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGAGTGCAGCAGCTGCCTaGTCGTGGGATGCACCACGG +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKSAAAA*SWDAPR
Trigger: CCGTGGTGCATCCCACGAGCAGGCAGCTGCTGCACT...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTCAGCTCTGGACATCTaGTGGGGTGAGGAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTSALDI*WGEEAL
Trigger: GAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGA...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCACAGAGGCACCCGAGTaGAGCTTTGTGAAGACAGGC +
Preference number: 4 (lower is better)
Translates to: ERALDKVCSVSTSLAPGSTEAPE*SFVKTG
Trigger: GCCTGTCTTCACAAAGCTGCACTCGGGTGCCTCTGT...GGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTATGTCCTCAGAGCCATaGGGTAGTGCTGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSMSSEP*GSAGSG
Trigger: CCCACTCCCAGCACTACCGCATGGCTCTGAGGACAT...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTGCCGCTTCGATCACTaGCCCCTGCACCCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSCRFDH*PLHPPW
Trigger: CCACGGCGGGTGCAGGGGGCAGTGATCGAAGCGGCA...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR CCA 90 bp GCTGCTGATAGGGACACTGATGAAAGCTCATGGAGCTGGGGACGGACGCCTCCATTCACCGATAGGATCTaGTCTCCTCTCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: AADRDTDESSWSWGRTPPFTDRI*SPLWSS
Trigger: GGAGCTCCAGAGAGGAGACCAGATCCTATCGGTGAA...TGGAGGCGTCCGTCCCCAGCTCCATGAGCTTTCATCAGTGTCCCTATCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCGCAGCTGCCTGCTCGTaGGATGCACCACGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFAAACS*DAPRRS
Trigger: TGACCTCCGTGGTGCATCCCACGAGCAGGCAGCTGC...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GGAGGCGGGCTGGAGCAGGCTCCAGGTCAGGGCCTCACGCTCAGCTTTACTTTCGTTCATCCCTACACCTaGCACTTTGAGCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: GGGLEQAPGQGLTLSFTFVHPYT*HFEQTK
Trigger: TTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAAC...GAAAGTAAAGCTGAGCGTGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCACCCAGCCTACATGCTaGTTTGCTGCACAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: ERALDKVCSVSTSLAPGSTQPTC*FAAQCG
Trigger: GCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGT...GGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GGAGGCGGGCTGGAGCAGGCTCCAGGTCAGGGCCTCACGCTCAGCTTTACTTTCCGAGCACAAAATTATTaGAACAAAGCAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GGGLEQAPGQGLTLSFTFRAQNY*NKAGRR
Trigger: CCTCCTCCCTGCTTTGTTCCAATAATTTTGTGCTCG...GAAAGTAAAGCTGAGCGTGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426717.6
CDS-3UTR TCA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCACCGTTGGAGAGTCATTaGAGGCTGACGAGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPPLESH*RLTSCG
Trigger: ACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGG...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACCCCCACCGACAATGTTaGAGCCCAGGCCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYPHRQC*SPGQWS
Trigger: GCTCCACTGGCCTGGGCTTCAACATTGTCGGTGGGG...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATGGACATCTGCTGGGGTaGGGAGGCTCTCATCTCATC +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHGHLLG*GGSHLI
Trigger: GATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCC...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACCTGGCTCGGAGTCCTaGAGGGCCGGCAGTAGGATC +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVPGSES*RAGSRI
Trigger: GATCCTACTGCCGGCCCTTCAGGACTCCGAGCCAGG...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCAGCAGGGGCTTCCACTaGACAATTCTGGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKASRGFH*TILGWA
Trigger: TGCCCAGCCCAGAATTGTTCAGTGGAAGCCCCTGCT...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR GCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCCGAACGATAGACCCTaGTTCCTTCAGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSPNDRP*FLQGFH
Trigger: GTGGAAGCCCTGAAGGAAGCAGGGTCTATCGTTCGG...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GATAGGGACACTGATGAAAGCTCATGGAGCTGGGGACGGACGCCTCCAAGCTTCGCTGACGAGTTGCGGTaGTATGTTGGGAATGACTGG +
Preference number: 4 (lower is better)
Translates to: DRDTDESSWSWGRTPPSFADELR*YVGNDW
Trigger: CCAGTCATTCCCAACATAGCACCGCAACTCGTCAGC...GAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGAGCTTTCATCAGTGTCCCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGTGCCTGCTCGTGGGATaGACCACGGAGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKCLLVG*TTEVNA
Trigger: GGCATTGACCTCCGTGGTGCATCCCACGAGCAGGCA...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTCGGACCCGGAGCTCATaGTGTGGTTCATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPRTRSS*CGSSSA
Trigger: AGCAGATGATGAACCACAGCATGAGCTCCGGGTCCG...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCGGACCCGGAGCTCATaGTGTGGTTCATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSRTRSS*CGSSSA
Trigger: AGCAGATGATGAACCACAGCATGAGCTCCGGGTCCG...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATGTGTGGCAGAATCCCTaGCAGGTCTGGATGTACCCC +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHVWQNP*QVWMYP
Trigger: GGGGTACATCCAGACCTGGCAGGGATTCTGCCACAC...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GGAGGCGGGCTGGAGCAGGCTCCAGGTCAGGGCCTCACGCTCAGCTTTACTTTCACCCTCTCACCAATTTaGTTGGTGATTCTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: GGGLEQAPGQGLTLSFTFTLSPI*LVILQA
Trigger: TGCTTGAAGAATCACCAAGCAAATTGGTGAGAGGGT...GAAAGTAAAGCTGAGCGTGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTCTCCGTCTCCTTGGTaGCAGGTTCTCCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTSPSPW*QVLLSA
Trigger: AGCAGACAGGAGAACCTGGCACCAAGGAGACGGAGA...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404783.7
ENST00000426717.6
CDS-3UTR GCA 90 bp GTTGGCATCCTTCAGTTAAAGGAACAACAGCCTTTCACCTGGTGTGGTCAGTGGTGGAGGGTCGGGGGTTaGCGGTCTGGGAGATACTGC +
Preference number: 4 (lower is better)
Translates to: VGILQLKEQQPFTWCGQWWRVGG*RSGRYC
Trigger: GCAGTATCTCCCAGACCGGCAACCCCCGACCCTCCA...CCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAACTGAAGGATGCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR GCA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTACATTCCTTCCGGGCTaGGGCAGTGGCAGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLTFLPG*GSGSSL
Trigger: CAGCGAGCTGCCACTGCCGCAGCCCGGAAGGAATGT...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR CCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTTTGGTGCTCGTCTTGTaGGGGCTTTTCCGCACACTG +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSLVLVL*GLFRTL
Trigger: CAGTGTGCGGAAAAGCCCCCACAAGACGAGCACCAA...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR CCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATAAGTCCCTTTGCCCTTaGTGCTCGTCTTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHKSLCP*CSSCGG
Trigger: GCCCCCACAAGACGAGCACCAAGGGCAAAGGGACTT...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR CCA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCCAGGGGAATAGTGCCTaGGAGAAGCAGGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSQGNSA*EKQAYH
Trigger: GTGATAAGCCTGCTTCTCCCAGGCACTATTCCCCTG...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGGAGCGTTTCTGATTaGTTCGCAGGGATCCGGACC +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPGSVSD*FAGIRT
Trigger: GGTCCGGATCCCTGCGAACCAATCAGAAACGCTCCC...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCGCTCTGGACATCTGCTaGGGTGAGGAGGCTCTCATC +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAALDIC*GEEALI
Trigger: GATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGC...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATGCTCTGGACATCTGCTaGGGTGAGGAGGCTCTCATC +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHALDIC*GEEALI
Trigger: GATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGC...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTGCTCTGGACATCTGCTaGGGTGAGGAGGCTCTCATC +
Preference number: 4 (lower is better)
Translates to: PITLMALSLALLPSLHAGALDIC*GEEALI
Trigger: GATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGC...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCGATGGGGCTTAGTCTaGGCATGCACAGAACCCAGA +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSRWGLV*ACTEPR
Trigger: TCTGGGTTCTGTGCATGCCCAGACTAAGCCCCATCG...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTGTTTGCTGCACAGTGTaGCAGAATCCCTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPVCCTV*QNPCQV
Trigger: GACCTGGCAGGGATTCTGCCACACTGTGCAGCAAAC...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCGTTTGCTGCACAGTGTaGCAGAATCCCTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTVCCTV*QNPCQV
Trigger: GACCTGGCAGGGATTCTGCCACACTGTGCAGCAAAC...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCGTGTTAGCACCAGTCTaGCCCCAGGCTCCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFVLAPV*PQAPSA
Trigger: TGCACTCGGAGCCTGGGGCCAGACTGGTGCTAACAC...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp AGCTCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTACTGATGAAAGCTCATaGAGCTGGGGACGGACGCCT +
Preference number: 4 (lower is better)
Translates to: SSWSWGRTPPSFFSRVTATDESS*SWGRTP
Trigger: AGGCGTCCGTCCCCAGCTCCATGAGCTTTCATCAGT...AGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR TCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTCTGTACCCGAGCCCCTaGCAGTTCCTCTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTLYPSP*QFLCQP
Trigger: TGGCTGGCAGAGGAACTGTCAGGGGCTCGGGTACAG...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR TCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTCCCCACCGACAATGTTaGAGCCCAGGCCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTPHRQC*SPGQWS
Trigger: GCTCCACTGGCCTGGGCTTCAACATTGTCGGTGGGG...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TACACCAGGCCCAGAACCCTCTCTGTGCCAAATGTCAGACAATTTATCCCCTTTCCCCACCGACAATGTTaGAGCCCAGGCCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: YTRPRTLSVPNVRQFIPFPHRQC*SPGQWS
Trigger: GCTCCACTGGCCTGGGCTTCAACATTGTCGGTGGGG...AAAGGGGATAAATTGTCTGACATTTGGCACAGAGAGGGTTCTGGGCCTGGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR TCA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTCCTGGCTCGGAGTCCTaGAGGGCCGGCAGTAGGATC +
Preference number: 4 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLPGSES*RAGSRI
Trigger: GATCCTACTGCCGGCCCTTCAGGACTCCGAGCCAGG...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCTCTGGGCTGAGTAGGTaGAACGGCGACCTAAAGTAT +
Preference number: 4 (lower is better)
Translates to: ERALDKVCSVSTSLAPGSSGLSR*NGDLKY
Trigger: ATACTTTAGGTCGCCGTTTCACCTACTCAGCCCAGA...GGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GTTGGCATCCTTCAGTTAAAGGAACAACAGCCTTTCACCTGGTGTGGTCAGTGGGCACCCTCCACGCGATaGAGTGTTTCCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VGILQLKEQQPFTWCGQWAPSTR*SVSSGR
Trigger: CCTGCCTGAGGAAACACTTCATCGCGTGGAGGGTGC...CCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAACTGAAGGATGCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR GCA 90 bp TATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTGGCAGGAGTCTGCCATCCTCTaGTGCAGCACCTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: YLLLSYPAYMLVCCTVWQESAIL*CSTSWY
Trigger: ATACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTC...CTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGAGTCTGCCATCCTCTaGTGCAGCACCTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPESAIL*CSTSWY
Trigger: ATACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTC...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATCCGAACGATAGACCCTaGTTCCTTCAGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHPNDRP*FLQGFH
Trigger: GTGGAAGCCCTGAAGGAAGCAGGGTCTATCGTTCGG...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGTGTGCAGGACTACCTTaGGAGGCTCTCCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKCAGLP*EALLPG
Trigger: CCCTGGAAGGAGAGCCTCGCAAGGTAGTCCTGCACA...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTTGCCTGCTCGTGGGATaGACCACGGAGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFCLLVG*TTEVNA
Trigger: GGCATTGACCTCCGTGGTGCATCCCACGAGCAGGCA...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTAGTGCAGCAGCTGCCTaGTCGTGGGATGCACCACGG +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTSAAAA*SWDAPR
Trigger: CCGTGGTGCATCCCACGAGCAGGCAGCTGCTGCACT...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTCAGCTCTGGACATCTaGTGGGGTGAGGAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLSALDI*WGEEAL
Trigger: GAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGA...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCTCAGCTCTGGACATCTaGTGGGGTGAGGAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFSALDI*WGEEAL
Trigger: GAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGA...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCTACATGCTGGTTTGCTaGACAGTGTGGCAGAATCCC +
Preference number: 4 (lower is better)
Translates to: ERALDKVCSVSTSLAPGSYMLVC*TVWQNP
Trigger: GGGATTCTGCCACACTGTGCAGCAAACCAGCATGTA...GGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCCACATGCATCATCGCTaGCAGGGCAACGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGHMHHR*QGNGAG
Trigger: GCCTGCACCGTTGCCCTGGCAGCGATGATGCATGTG...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTAGGGCCCACAGCACATaGATCATCGCTGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVRAHST*IIAARA
Trigger: TGCCCTGGCAGCGATGATGCATGTGCTGTGGGCCCT...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTAGGGCCCACAGCACATaGATCATCGCTGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFRAHST*IIAARA
Trigger: TGCCCTGGCAGCGATGATGCATGTGCTGTGGGCCCT...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTCCAGGTTCTCCTGTCTaGTGTCCGGTTCACACTTGC +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPPGSPV*CPVHTC
Trigger: GCAAGTGTGAACCGGACAGCAGACAGGAGAACCTGG...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404783.7
ENST00000426717.6
CDS-3UTR GCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTCAGCCTAGACCGAGCTaGCGCTTCGATCACTGCCCC +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTQPRPS*RFDHCP
Trigger: GGGGCAGTGATCGAAGCGGCAGCTCGGTCTAGGCTG...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR CCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTTCTCCAGGAATGTGTTaGTTCCCCACACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPSPGMC*FPTPPA
Trigger: TGCAGGAGGTGTGGGGAACCAACACATTCCTGGAGA...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTTTGCAGGTTCCGGAGGCCTaGTGTAGTCGTCGTCAACAA +
Preference number: 4 (lower is better)
Translates to: SWSWGRTPPSFFSRVTALQVPEA*CSRRQQ
Trigger: TTGTTGACGACGACTACACCAGGCCTCCGGAACCTG...CAAAGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCAGGGGAATAGTGCCTaGGAGAAGCAGGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSQGNSA*EKQAYH
Trigger: GTGATAAGCCTGCTTCTCCCAGGCACTATTCCCCTG...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTATCTGGTCTCCTCTCTaGAGCTCCCCACTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPIWSPL*SSPLRS
Trigger: AGACCTAAGTGGGGAGCTCCAGAGAGGAGACCAGAT...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTATCTGGTCTCCTCTCTaGAGCTCCCCACTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSIWSPL*SSPLRS
Trigger: AGACCTAAGTGGGGAGCTCCAGAGAGGAGACCAGAT...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCGCAGCTGCCTGCTCGTaGGATGCACCACGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPAAACS*DAPRRS
Trigger: TGACCTCCGTGGTGCATCCCACGAGCAGGCAGCTGC...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCAGCTAAATCAGCTCTaGACATCTGCTGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSQLNQL*TSAGVR
Trigger: CCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTG...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTGGCAGCGATGGGGCTTAGTCTaGGCATGCACAGAACCCAGA +
Preference number: 4 (lower is better)
Translates to: YLLLSYPAYMLVCCTVWQRWGLV*ACTEPR
Trigger: TCTGGGTTCTGTGCATGCCCAGACTAAGCCCCATCG...CTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCCCAGAAATAAGGCGATaGGGCTTAGTCTGGGCATGC +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTPEIRR*GLVWAC
Trigger: GCATGCCCAGACTAAGCCCCATCGCCTTATTTCTGG...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCGTTTGCTGCACAGTGTaGCAGAATCCCTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAVCCTV*QNPCQV
Trigger: GACCTGGCAGGGATTCTGCCACACTGTGCAGCAAAC...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGTTTGCTGCACAGTGTaGCAGAATCCCTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPVCCTV*QNPCQV
Trigger: GACCTGGCAGGGATTCTGCCACACTGTGCAGCAAAC...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTGTGTTAGCACCAGTCTaGCCCCAGGCTCCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFVLAPV*PQAPSA
Trigger: TGCACTCGGAGCCTGGGGCCAGACTGGTGCTAACAC...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTGTTAGCACCAGTCTaGCCCCAGGCTCCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVVLAPV*PQAPSA
Trigger: TGCACTCGGAGCCTGGGGCCAGACTGGTGCTAACAC...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTAAGCTGAGACCCCCGTaGTGCTACACATTGTACCAG +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPKLRPP*CYTLYQ
Trigger: CTGGTACAATGTGTAGCACCACGGGGGTCTCAGCTT...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTTCTCGAGCCAGAGGTTaGAGAGTTCTTTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPSRARG*RVLSWL
Trigger: GAGCCAGGAAAGAACTCTCCAACCTCTGGCTCGAGA...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCGCTTCTCCGTCTCCTTaGTGCCAGGTTCTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAASPSP*CQVLLS
Trigger: AGACAGGAGAACCTGGCACCAAGGAGACGGAGAAGC...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404783.7
ENST00000426717.6
CDS-3UTR CCA 90 bp GCAATGCCTCAAATCCTTTTCATGGTAGGAGATAGCTCAGGGGTATCTCCTGCCGAAAGCTCATGGAGCTaGGGACGGACGCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: AMPQILFMVGDSSGVSPAESSWS*GRTPPS
Trigger: GCTTGGAGGCGTCCGTCCCCAGCTCCATGAGCTTTC...GGCAGGAGATACCCCTGAGCTATCTCCTACCATGAAAAGGATTTGAGGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGGGGAACGAGGCGTGTaGGGGGAGGGACAGAACCAA +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTGERGV*GEGQNQ
Trigger: TTGGTTCTGTCCCTCCCCCCACACGCCTCGTTCCCC...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR CCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGGCAGTGGCAGCTCGCTaGGGGACCCAAACGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGAVAAR*GTQTLC
Trigger: GCACAGCGTTTGGGTCCCCCAGCGAGCTGCCACTGC...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR TCA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCACTGTGGGAAACCTCTaGCACATCAACCTCATTCAC +
Preference number: 4 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSTVGNL*HINLIH
Trigger: GTGAATGAGGTTGATGTGTCAGAGGTTTCCCACAGT...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR TCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCAGAGTCATTGAAGGCTaGCGAGTTGCGGTGCTATGT +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTRVIEG*RVAVLC
Trigger: ACATAGCACCGCAACTCGTCAGCCTTCAATGACTCT...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGGGACATCTGCTGGGGTaGGGAGGCTCTCATCTCATC +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLGHLLG*GGSHLI
Trigger: GATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCC...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGGGACATCTGCTGGGGTaGGGAGGCTCTCATCTCATC +
Preference number: 4 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKGHLLG*GGSHLI
Trigger: GATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCC...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCGCCCACCTGTCTTCTTaGCTGGCATTCTTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAAHLSS*LAFLGL
Trigger: AAGACCCAAGAATGCCAGTCAAGAAGACAGGTGGGC...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376104.7
CDS-3UTR GCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCCCACAAGTCCCTTTaGCCTTGGTGCTCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKPHKSL*PWCSSC
Trigger: ACAAGACGAGCACCAAGGGCAAAGGGACTTGTGGGG...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR GCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCGAGTCTGCCATCCTCTaGTGCAGCACCTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLESAIL*CSTSWY
Trigger: ATACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTC...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGGAGTCTGCCATCCTCTaGTGCAGCACCTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKESAIL*CSTSWY
Trigger: ATACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTC...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GGGTATCTCCTGCCCATGGTTTTGGGTAGGGCTGGTGGGAACCTGGGAGCTGGCCCTTCCATCTTTTTGTaGAGCTCCTCCATCTATAAT +
Preference number: 4 (lower is better)
Translates to: GYLLPMVLGRAGGNLGAGPSIFL*SSSIYN
Trigger: ATTATAGATGGAGGAGCTGCACAAAAAGATGGAAGG...GCCAGCTCCCAGGTTCCCACCAGCCCTACCCAAAACCATGGGCAGGAGATACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTGCTGACGAGTTGCGGTaGTATGTTGGGAATGACTGG +
Preference number: 4 (lower is better)
Translates to: PITLMALSLALLPSLHAGADELR*YVGNDW
Trigger: CCAGTCATTCCCAACATAGCACCGCAACTCGTCAGC...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGTGTGCAGGACTACCTTaGGAGGCTCTCCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKCAGLP*EALLPG
Trigger: CCCTGGAAGGAGAGCCTCGCAAGGTAGTCCTGCACA...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTGTGCAGGACTACCTTaGGAGGCTCTCCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGCAGLP*EALLPG
Trigger: CCCTGGAAGGAGAGCCTCGCAAGGTAGTCCTGCACA...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTTGTGCAGGACTACCTTaGGAGGCTCTCCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFCAGLP*EALLPG
Trigger: CCCTGGAAGGAGAGCCTCGCAAGGTAGTCCTGCACA...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTCCAGTGGAGCCTTTGTaGAGGACTACCTTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVPVEPL*RTTLRG
Trigger: GCCTCGCAAGGTAGTCCTGCACAAAGGCTCCACTGG...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGCCAGTGGAGCCTTTGTaGAGGACTACCTTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLPVEPL*RTTLRG
Trigger: GCCTCGCAAGGTAGTCCTGCACAAAGGCTCCACTGG...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCACACCACGGAGGTCAATaGCATTCACCGATAGGATCT +
Preference number: 4 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPHHGGQ*HSPIGS
Trigger: AGATCCTATCGGTGAATGGCATTGACCTCCGTGGTG...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCACCACGGAGGTCAATaGCATTCACCGATAGGATCT +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSHHGGQ*HSPIGS
Trigger: AGATCCTATCGGTGAATGGCATTGACCTCCGTGGTG...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTATGCCTGCTCGTGGGATaGACCACGGAGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVCLLVG*TTEVNA
Trigger: GGCATTGACCTCCGTGGTGCATCCCACGAGCAGGCA...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATGCAAGGCTACCAGAAATGTGAGCGAAAGGCAAGTAAAAGCCGCAGAGGAGGCCGGACCCGGAGCTCATaGTGTGGTTCATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: MQGYQKCERKASKSRRGGRTRSS*CGSSSA
Trigger: AGCAGATGATGAACCACAGCATGAGCTCCGGGTCCG...GCCTCCTCTGCGGCTTTTACTTGCCTTTCGCTCACATTTCTGGTAGCCTTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR GCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTATGACTCTCCTGGCTTaGCACCACTCATCATCAGAG +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSMTLLA*HHSSSE
Trigger: CTCTGATGATGAGTGGTGGCAAGCCAGGAGAGTCAT...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCATGACTCTCCTGGCTTaGCACCACTCATCATCAGAG +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTMTLLA*HHSSSE
Trigger: CTCTGATGATGAGTGGTGGCAAGCCAGGAGAGTCAT...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AGGGACACTGATGAAAGCTCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCCAAAGTGATAGTCTCTaGCATCCACCTCGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: RDTDESSWSWGRTPPSFFQSDSL*HPPRSL
Trigger: GAGACTACGAGGTGGATGGCAGAGACTATCACTTTG...GAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGAGCTTTCATCAGTGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCTCAGCTCTGGACATCTaGTGGGGTGAGGAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFSALDI*WGEEAL
Trigger: GAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGA...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTGGCAGGGCTTAGTCTGGGCATaGACAGAACCCAGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: YLLLSYPAYMLVCCTVWQGLVWA*TEPRVE
Trigger: CTCTACTCTGGGTTCTGTGCATGCCCAGACTAAGCC...CTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATGGCTTAGTCTGGGCATaGACAGAACCCAGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHGLVWA*TEPRVE
Trigger: CTCTACTCTGGGTTCTGTGCATGCCCAGACTAAGCC...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGGTGTGGCAGAATCCCTaGCAGGTCTGGATGTACCCC +
Preference number: 4 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKVWQNP*QVWMYP
Trigger: GGGGTACATCCAGACCTGGCAGGGATTCTGCCACAC...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTACATGCTGGTTTGCTaGACAGTGTGGCAGAATCCC +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTYMLVC*TVWQNP
Trigger: GGGATTCTGCCACACTGTGCAGCAAACCAGCATGTA...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCGGCTCCGAGTGCATTTaGACCAGATGTAATCTGGGT +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSGSECI*TRCNLG
Trigger: ACCCAGATTACATCTGGTGCAAATGCACTCGGAGCC...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCTGAGACCCCCGTGGTaGTACACATTGTACCAGAGC +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKLRPPW*YTLYQS
Trigger: GCTCTGGTACAATGTGTAGCACCACGGGGGTCTCAG...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCACAGAGGCACCCGAGTaGAGCTTTGTGAAGACAGGC +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFTEAPE*SFVKTG
Trigger: GCCTGTCTTCACAAAGCTGCACTCGGGTGCCTCTGT...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACACATGCATCATCGCTaGCAGGGCAACGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFIHMHHR*QGNGAG
Trigger: GCCTGCACCGTTGCCCTGGCAGCGATGATGCATGTG...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCACGGGTACAGCCTGGTaGACTCAGAAGTTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: ERALDKVCSVSTSLAPGSTGTAW*TQKLRN
Trigger: GTTTCTTAACTTCTGAGTGCACCAGGCTGTACCCGT...GGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCTCCCTCCCATCCTGTaGTACAGCTCGGTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKLPPIL*YSSVEK
Trigger: TTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAG...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTCTGGGCTGGGCATCTaGCTTGGTTTTGAGTTGTCG +
Preference number: 4 (lower is better)
Translates to: PITLMALSLALLPSLHAGSGLGI*LGFELS
Trigger: CGACAACTCAAAACCAAGGCAGATGCCCAGCCCAGA...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR GCA 90 bp GGCTACCAGAAATGTGAGCGAAAGGCAAGTAAAAGCCGCAGAGGAGGCTGCATTTCTCCGTCTCCTTGGTaGCAGGTTCTCCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GYQKCERKASKSRRGGCISPSPW*QVLLSA
Trigger: AGCAGACAGGAGAACCTGGCACCAAGGAGACGGAGA...AATGCAGCCTCCTCTGCGGCTTTTACTTGCCTTTCGCTCACATTTCTGGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR CCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTCAGCCACAAGCACAGTaGGCATCCCTGATCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVQPQAQ*ASLIRV
Trigger: CACCCTGATCAGGGATGCCCACTGTGCTTGTGGCTG...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR CCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTTCTCCAGGAATGTGTTaGTTCCCCACACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPSPGMC*FPTPPA
Trigger: TGCAGGAGGTGTGGGGAACCAACACATTCCTGGAGA...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTTTGTCTCCAGGAATGTGTTaGTTCCCCACACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SWSWGRTPPSFFSRVTALSPGMC*FPTPPA
Trigger: TGCAGGAGGTGTGGGGAACCAACACATTCCTGGAGA...CAAAGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp TATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTGGCAGTCTCCAGGAATGTGTTaGTTCCCCACACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: YLLLSYPAYMLVCCTVWQSPGMC*FPTPPA
Trigger: TGCAGGAGGTGTGGGGAACCAACACATTCCTGGAGA...CTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATTTCACCGATAGGATCTaGTCTCCTCTCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHFTDRI*SPLWSS
Trigger: GGAGCTCCAGAGAGGAGACCAGATCCTATCGGTGAA...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCACCGATAGGATCTaGTCTCCTCTCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAFTDRI*SPLWSS
Trigger: GGAGCTCCAGAGAGGAGACCAGATCCTATCGGTGAA...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTGGGAGCGTTTCTGATTaGTTCGCAGGGATCCGGACC +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFGSVSD*FAGIRT
Trigger: GGTCCGGATCCCTGCGAACCAATCAGAAACGCTCCC...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACGGGAGCGTTTCTGATTaGTTCGCAGGGATCCGGACC +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYGSVSD*FAGIRT
Trigger: GGTCCGGATCCCTGCGAACCAATCAGAAACGCTCCC...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCACTAAGTCCTTGACTTaGCAGCCCACTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTTKSLT*QPTVLA
Trigger: AGCAAGGACAGTGGGCTGCCAAGTCAAGGACTTAGT...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACTAAGTCCTTGACTTaGCAGCCCACTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPTKSLT*QPTVLA
Trigger: AGCAAGGACAGTGGGCTGCCAAGTCAAGGACTTAGT...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATCTCGTAGTCTCGCTTTaGCCTCGTAGTATGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHLVVSL*PRSMRH
Trigger: GTGCCTCATACTACGAGGCCAAAGCGAGACTACGAG...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTTCTCATCTCATCTCTTaGGCAGAAAGCCCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSSHLIS*AESPSE
Trigger: CTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGA...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCTCTCATCTCATCTCTTaGGCAGAAAGCCCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSSHLIS*AESPSE
Trigger: CTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGA...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACGCTCTGGACATCTGCTaGGGTGAGGAGGCTCTCATC +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYALDIC*GEEALI
Trigger: GATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGC...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCGCTCTGGACATCTGCTaGGGTGAGGAGGCTCTCATC +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFALDIC*GEEALI
Trigger: GATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGC...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGGCTCTGGACATCTGCTaGGGTGAGGAGGCTCTCATC +
Preference number: 4 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKALDIC*GEEALI
Trigger: GATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGC...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGGCTCTGGACATCTGCTaGGGTGAGGAGGCTCTCATC +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLALDIC*GEEALI
Trigger: GATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGC...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTGCTCTGGACATCTGCTaGGGTGAGGAGGCTCTCATC +
Preference number: 4 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLALDIC*GEEALI
Trigger: GATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGC...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCCAGCTAAATCAGCTCTaGACATCTGCTGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAQLNQL*TSAGVR
Trigger: CCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTG...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCAGCAAGCCTTCAGGTTaGAGAGAGCTCTGGACAAAG +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSSKPSG*RELWTK
Trigger: CTTTGTCCAGAGCTCTCTCCAACCTGAAGGCTTGCT...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCTGGAGAGTTCTTTCCTaGCTCGGAGTCCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFWRVLS*LGVLKG
Trigger: GCCCTTCAGGACTCCGAGCCAGGAAAGAACTCTCCA...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp TATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTGGCAGCAGGCATTTTTACAATaGGGCCACCCACCGCTGACA +
Preference number: 4 (lower is better)
Translates to: YLLLSYPAYMLVCCTVWQQAFLQ*GHPPLT
Trigger: TGTCAGCGGTGGGTGGCCCCATTGTAAAAATGCCTG...CTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280241.12
ENST00000398309.6
CDS-3UTR CCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTTCCACTGAACAATTCTaGGCTGGGCATCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPSTEQF*AGHLPW
Trigger: CCAAGGCAGATGCCCAGCCCAGAATTGTTCAGTGGA...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
3UTR CAA 72 bp GTGAAGGTGACATTGCACCCCCAGCAAGCCTTCAGGTaGGAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGC +
Preference number: 4 (lower is better)
Translates to: VKVTLHPQQAFR*ERALDKVCSVS
Trigger: GCTAACACTGCAAACTTTGTCCAGAGCTCTCTCCAACCTGAAGGCTTGCTGGGGGTGCAATGTCACCTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTGTGCTTTGGAATTGGTaGGTACCTTCCTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPVLWNW*VPSWRD
Trigger: ATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCAC...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCAGAGTCATTGAAGGCTaGCGAGTTGCGGTGCTATGT +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKARVIEG*RVAVLC
Trigger: ACATAGCACCGCAACTCGTCAGCCTTCAATGACTCT...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTAGAGTCATTGAAGGCTaGCGAGTTGCGGTGCTATGT +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPRVIEG*RVAVLC
Trigger: ACATAGCACCGCAACTCGTCAGCCTTCAATGACTCT...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCCCCCACCGACAATGTTaGAGCCCAGGCCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTPHRQC*SPGQWS
Trigger: GCTCCACTGGCCTGGGCTTCAACATTGTCGGTGGGG...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCATTAAAACTAAGTCCTTaGCTTGGCAGCCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPLKLSP*LGSPLS
Trigger: GGACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAA...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCATATCAAGTCGTCATTaGTCCGATCCTTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSISSRH*SDPSWA
Trigger: GGCCCATGAAGGATCGGATCAATGACGACTTGATAT...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAATATCAAGTCGTCATTaGTCCGATCCTTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPISSRH*SDPSWA
Trigger: GGCCCATGAAGGATCGGATCAATGACGACTTGATAT...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCTTGAGGGAATCCAGATaGAAGGCCCAGATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSLRESR*KAQIAL
Trigger: AAGAGCAATCTGGGCCTTTCATCTGGATTCCCTCAA...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGGACATCTGCTGGGGTaGGGAGGCTCTCATCTCATC +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTGHLLG*GGSHLI
Trigger: GATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCC...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCCATGGACTTGCTGTCTaGATCAGCCATGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAHGLAV*ISHEPF
Trigger: AAAGGGCTCATGGCTGATTCAGACAGCAAGTCCATG...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTCTGGGCTGAGTAGGTaGAACGGCGACCTAAAGTAT +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKASGLSR*NGDLKY
Trigger: ATACTTTAGGTCGCCGTTTCACCTACTCAGCCCAGA...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCCTTTACTTTCTGGGCTaGGTAGGTGAAACGGCGACC +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFLYFLG*VGETAT
Trigger: GGTCGCCGTTTCACCTACTCAGCCCAGAAAGTAAAG...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTATGGCATGGCTTCAATaGGGAGGAAGAGGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSMAWLQ*GGRGLL
Trigger: TAGCAAACCTCTTCCTCCTCATTGAAGCCATGCCAT...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTATGGCATGGCTTCAATaGGGAGGAAGAGGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPMAWLQ*GGRGLL
Trigger: TAGCAAACCTCTTCCTCCTCATTGAAGCCATGCCAT...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTAGTCGAGGTAAGGAATaGTCATGTGGAGCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPSRGKE*SCGASS
Trigger: TGAGGACGCTCCACATGATCATTCCTTACCTCGACT...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTTCCCTTTGCCCTTGGTaGTCGTCTTGTGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVSLCPW*SSCGGF
Trigger: AAAGCCCCCACAAGACGAGCACCAAGGGCAAAGGGA...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR GCA 90 bp CAAGATACAATCATTGACCCTGAGTCTGCCATCCTCTGCTGCAGCACCTCCTGGTCTGCCATCCTCTGCTaGAGCACCTCCTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: QDTIIDPESAILCCSTSWSAILC*STSWYN
Trigger: ATTATACCAGGAGGTGCTGCAGCAGAGGATGGCAGA...CCAGGAGGTGCTGCAGCAGAGGATGGCAGACTCAGGGTCAATGATTGTATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529401.5
CDS-3UTR GCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGGAGTCTGCCATCCTCTaGTGCAGCACCTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLESAIL*CSTSWY
Trigger: ATACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTC...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCCCGAACGATAGACCCTaGTTCCTTCAGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFPNDRP*FLQGFH
Trigger: GTGGAAGCCCTGAAGGAAGCAGGGTCTATCGTTCGG...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCCGAACGATAGACCCTaGTTCCTTCAGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PSFILQCLFCPTLWPLCFPNDRP*FLQGFH
Trigger: GTGGAAGCCCTGAAGGAAGCAGGGTCTATCGTTCGG...GAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCCCGAACGATAGACCCTaGTTCCTTCAGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGPNDRP*FLQGFH
Trigger: GTGGAAGCCCTGAAGGAAGCAGGGTCTATCGTTCGG...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GCAATGCCTCAAATCCTTTTCATGGTAGGAGATAGCTCAGGGGTATCTCCTGCCCCGAACGATAGACCCTaGTTCCTTCAGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: AMPQILFMVGDSSGVSPAPNDRP*FLQGFH
Trigger: GTGGAAGCCCTGAAGGAAGCAGGGTCTATCGTTCGG...GGCAGGAGATACCCCTGAGCTATCTCCTACCATGAAAAGGATTTGAGGCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGGCTGACGAGTTGCGGTaGTATGTTGGGAATGACTGG +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKADELR*YVGNDW
Trigger: CCAGTCATTCCCAACATAGCACCGCAACTCGTCAGC...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATCACCACGGAGGTCAATaGCATTCACCGATAGGATCT +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHHHGGQ*HSPIGS
Trigger: AGATCCTATCGGTGAATGGCATTGACCTCCGTGGTG...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTGGCAGCACCACGGAGGTCAATaGCATTCACCGATAGGATCT +
Preference number: 4 (lower is better)
Translates to: YLLLSYPAYMLVCCTVWQHHGGQ*HSPIGS
Trigger: AGATCCTATCGGTGAATGGCATTGACCTCCGTGGTG...CTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCAGTGCAGCAGCTGCCTaGTCGTGGGATGCACCACGG +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFSAAAA*SWDAPR
Trigger: CCGTGGTGCATCCCACGAGCAGGCAGCTGCTGCACT...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCCGGACCCGGAGCTCATaGTGTGGTTCATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGRTRSS*CGSSSA
Trigger: AGCAGATGATGAACCACAGCATGAGCTCCGGGTCCG...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTTTGATGACTCTCCTGGCTTaGCACCACTCATCATCAGAG +
Preference number: 4 (lower is better)
Translates to: SWSWGRTPPSFFSRVTALMTLLA*HHSSSE
Trigger: CTCTGATGATGAGTGGTGGCAAGCCAGGAGAGTCAT...CAAAGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCACAAAGTGATAGTCTCTaGCATCCACCTCGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPQSDSL*HPPRSL
Trigger: GAGACTACGAGGTGGATGGCAGAGACTATCACTTTG...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATATCAGCTCTGGACATCTaGTGGGGTGAGGAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFISALDI*WGEEAL
Trigger: GAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGA...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTCAGCTCTGGACATCTaGTGGGGTGAGGAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PITDVGNGKADEVRVLAISALDI*WGEEAL
Trigger: GAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGA...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATTACATGCTGGTTTGCTaGACAGTGTGGCAGAATCCC +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHYMLVC*TVWQNP
Trigger: GGGATTCTGCCACACTGTGCAGCAAACCAGCATGTA...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTACATGCTGGTTTGCTaGACAGTGTGGCAGAATCCC +
Preference number: 4 (lower is better)
Translates to: PITLMALSLALLPSLHAGYMLVC*TVWQNP
Trigger: GGGATTCTGCCACACTGTGCAGCAAACCAGCATGTA...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCCCTACCCAGCCTACATaGTGGTTTGCTGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLPTQPT*WFAAQC
Trigger: ACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGG...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GGAGGCGGGCTGGAGCAGGCTCCAGGTCAGGGCCTCACGCTCAGCTTTACTTTCAGTCATCAGATTTGCTaGAAAATACACCAGTTCATT +
Preference number: 4 (lower is better)
Translates to: GGGLEQAPGQGLTLSFTFSHQIC*KIHQFI
Trigger: AATGAACTGGTGTATTTTGCAGCAAATCTGATGACT...GAAAGTAAAGCTGAGCGTGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCTCTCCGTCTCCTTGGTaGCAGGTTCTCCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFSPSPW*QVLLSA
Trigger: AGCAGACAGGAGAACCTGGCACCAAGGAGACGGAGA...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404783.7
ENST00000426717.6
CDS-3UTR GCA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAAGGGACCCAAACGCTGTaGTCGCCGGGCACATGGAGC +
Preference number: 4 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKGTQTL*SPGTWS
Trigger: GCTCCATGTGCCCGGCGAGCACAGCGTTTGGGTCCC...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR CCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTTCCACCGCTTTACTGTaGGAAACCTCTGACACATCA +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSSTALL*ETSDTS
Trigger: TGATGTGTCAGAGGTTTCCCACAGTAAAGCGGTGGA...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCCAGGGGAATAGTGCCTaGGAGAAGCAGGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFQGNSA*EKQAYH
Trigger: GTGATAAGCCTGCTTCTCCCAGGCACTATTCCCCTG...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTGGGAGCGTTTCTGATTaGTTCGCAGGGATCCGGACC +
Preference number: 4 (lower is better)
Translates to: PITDVGNGKADEVRVLAIGSVSD*FAGIRT
Trigger: GGTCCGGATCCCTGCGAACCAATCAGAAACGCTCCC...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTGGGAGCGTTTCTGATTaGTTCGCAGGGATCCGGACC +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSGSVSD*FAGIRT
Trigger: GGTCCGGATCCCTGCGAACCAATCAGAAACGCTCCC...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCGGGAGCGTTTCTGATTaGTTCGCAGGGATCCGGACC +
Preference number: 4 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGGSVSD*FAGIRT
Trigger: GGTCCGGATCCCTGCGAACCAATCAGAAACGCTCCC...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTTTGACTAAGTCCTTGACTTaGCAGCCCACTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: SWSWGRTPPSFFSRVTALTKSLT*QPTVLA
Trigger: AGCAAGGACAGTGGGCTGCCAAGTCAAGGACTTAGT...CAAAGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCCAGCTAAATCAGCTCTaGACATCTGCTGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLQLNQL*TSAGVR
Trigger: CCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTG...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCAAAGCTAATCCCAGGTaGAATCCCCTCCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAKANPR*NPLLSV
Trigger: CACTGACAGGAGGGGATTCCACCTGGGATTAGCTTT...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTTCTCCCCAAACACCATaGGCAAAAGCAATGCTGATG +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPSPQTP*AKAMLM
Trigger: CATCAGCATTGCTTTTGCCCATGGTGTTTGGGGAGA...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGCGATGGGGCTTAGTCTaGGCATGCACAGAACCCAGA +
Preference number: 4 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKRWGLV*ACTEPR
Trigger: TCTGGGTTCTGTGCATGCCCAGACTAAGCCCCATCG...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCAATCCCTGCCAGGTCTaGATGTACCCCAGAAATAAG +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSNPCQV*MYPRNK
Trigger: CTTATTTCTGGGGTACATCCAGACCTGGCAGGGATT...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACACCCAGCCTACATGCTaGTTTGCTGCACAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYTQPTC*FAAQCG
Trigger: GCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGT...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCACCCAGCCTACATGCTaGTTTGCTGCACAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PSFILQCLFCPTLWPLCFTQPTC*FAAQCG
Trigger: GCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGT...GAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCGGTTGGAGAGAGCTCTaGACAAAGTTTGCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSGWREL*TKFAVL
Trigger: TAACACTGCAAACTTTGTCCAGAGCTCTCTCCAACC...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTCTCCGGGAGGCGGGCTaGAGCAGGCTCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILLREAG*SRLQVR
Trigger: CCTGACCTGGAGCCTGCTCCAGCCCGCCTCCCGGAG...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCGTCAACCTTGCCACTTaGTTGTCTGTCCTCATGAGT +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTVNLAT*LSVLMS
Trigger: ACTCATGAGGACAGACAACCAAGTGGCAAGGTTGAC...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTACTTAGTACAGTGGTaGACAGGCATCCAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PITLMALSLALLPSLHAGYLVQW*TGIQAG
Trigger: CCCTGCTTGGATGCCTGTCCACCACTGTACTAAGTA...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR CCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATGGGCCTCTTACTTCGTaGGTTAGTCGAGGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHGPLTS*VSRGKE
Trigger: TTCCTTACCTCGACTAACCCACGAAGTAAGAGGCCC...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGGCCTCTTACTTCGTaGGTTAGTCGAGGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPGPLTS*VSRGKE
Trigger: TTCCTTACCTCGACTAACCCACGAAGTAAGAGGCCC...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AAGATACAATCATTGACCCTGAGTCTGCCATCCTCTGCTGCAGCACCTCCTGGTAGCCCGAGAAACACTTaGCCGTTGCATAGCGAAAGC +
Preference number: 4 (lower is better)
Translates to: KIQSLTLSLPSSAAAPPGSPRNT*PLHSES
Trigger: GCTTTCGCTATGCAACGGCCAAGTGTTTCTCGGGCT...ACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTCAGGGTCAATGATTGTATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529401.5
CDS-3UTR CCA 90 bp CAGTTAAAGGAACAACAGCCTTTCACCTGGTGTGGTCAGTGGATTCGCATACAAGTAAGACATGGAGACTaGAGGGTCGGGGGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: QLKEQQPFTWCGQWIRIQVRHGD*RVGGCR
Trigger: CCGGCAACCCCCGACCCTCCAGTCTCCATGTCTTAC...TTGTATGCGAATCCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR TCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCGCATTCATACTGCACTaGTGCCTACTCTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSAFILH*CLLFPL
Trigger: CAAAGGAAAGAGTAGGCATCAGTGCAGTATGAATGC...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR TCA 90 bp GAGGTAACAAAGCCACGGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACCTGTACCCGAGCCCCTaGCAGTTCCTCTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: EVTKPRFTFFGHEPSIFHLYPSP*QFLCQP
Trigger: TGGCTGGCAGAGGAACTGTCAGGGGCTCGGGTACAG...GTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACCGTGGCTTTGTTACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR TCA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCGAGGAGGGCATGGTCTaGGAACTGTACCCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFEEGMV*ELYPSP
Trigger: GGGGCTCGGGTACAGTTCTCAGACCATGCCCTCCTC...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR TCA 90 bp GAGGTAACAAAGCCACGGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACGAGGAGGGCATGGTCTaGGAACTGTACCCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: EVTKPRFTFFGHEPSIFHEEGMV*ELYPSP
Trigger: GGGGCTCGGGTACAGTTCTCAGACCATGCCCTCCTC...GTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACCGTGGCTTTGTTACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR TCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGAGAGTCATTGAAGGCTaGCGAGTTGCGGTGCTATGT +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKRVIEG*RVAVLC
Trigger: ACATAGCACCGCAACTCGTCAGCCTTCAATGACTCT...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACCGTTGGAGAGTCATTaGAGGCTGACGAGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVPLESH*RLTSCG
Trigger: ACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGG...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GAGGTAACAAAGCCACGGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACCCCCACCGACAATGTTaGAGCCCAGGCCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: EVTKPRFTFFGHEPSIFHPHRQC*SPGQWS
Trigger: GCTCCACTGGCCTGGGCTTCAACATTGTCGGTGGGG...GTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACCGTGGCTTTGTTACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR TCA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTCCCCACCGACAATGTTaGAGCCCAGGCCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPPHRQC*SPGQWS
Trigger: GCTCCACTGGCCTGGGCTTCAACATTGTCGGTGGGG...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR TCA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAGCTCATAGGAAAGAATaGGGTCTTCTTGTCCTCGTT +
Preference number: 4 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPAHRKE*GLLVLV
Trigger: AACGAGGACAAGAAGACCTCATTCTTTCCTATGAGC...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTTTGAGGGAATCCAGATaGAAGGCCCAGATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPLRESR*KAQIAL
Trigger: AAGAGCAATCTGGGCCTTTCATCTGGATTCCCTCAA...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTGAAGCCCCATCACTCTaGTGGCTCTATCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFEAPSL*WLYLLL
Trigger: GAGCAAGAGATAGAGCCATCAGAGTGATGGGGCTTC...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCCCGATGTTCTTACTGTaGAGAAGCCCCATCACTCTG +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFPMFLL*RSPITL
Trigger: CAGAGTGATGGGGCTTCTTCACAGTAAGAACATCGG...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCGATGTTCTTACTGTaGAGAAGCCCCATCACTCTG +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKPMFLL*RSPITL
Trigger: CAGAGTGATGGGGCTTCTTCACAGTAAGAACATCGG...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCGATCTGGCACTTTTCTaGAAGGGCCCAGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGDLALF*KGPACV
Trigger: CACACATGCTGGGCCCTTTCAGAAAAGTGCCAGATC...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTGGTTGTCTGTCCTCATaGGTTGCTAGGGAGATACTA +
Preference number: 4 (lower is better)
Translates to: PITLMALSLALLPSLHAGGCLSS*VAREIL
Trigger: TAGTATCTCCCTAGCAACTCATGAGGACAGACAACC...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTAGAGAGGTTCTTTTCTaGTACATGCACGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSREVLF*YMHEFW
Trigger: CCAGAACTCGTGCATGTATCAGAAAAGAACCTCTCT...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTTTACATCACAGGGGGTaGCCATGCAGCATTCTCGCT +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVLHHRG*PCSILA
Trigger: AGCGAGAATGCTGCATGGTCACCCCCTGTGATGTAA...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404783.7
ENST00000426717.6
CDS-3UTR GCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGTCTGCCATCCTCTGCTaGAGCACCTCCTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKSAILC*STSWYN
Trigger: ATTATACCAGGAGGTGCTGCAGCAGAGGATGGCAGA...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGAGTCTGCCATCCTCTaGTGCAGCACCTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTESAIL*CSTSWY
Trigger: ATACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTC...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTACACCAGGCCCGAGTCTGCCATCCTCTaGTGCAGCACCTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: QILGILNRKVLGHKYTRPESAIL*CSTSWY
Trigger: ATACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTC...GGGCCTGGTGTACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATAGAGTCTGCCATCCTCTaGTGCAGCACCTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFIESAIL*CSTSWY
Trigger: ATACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTC...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGGCTGACGAGTTGCGGTaGTATGTTGGGAATGACTGG +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLADELR*YVGNDW
Trigger: CCAGTCATTCCCAACATAGCACCGCAACTCGTCAGC...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCGCTGACGAGTTGCGGTaGTATGTTGGGAATGACTGG +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGADELR*YVGNDW
Trigger: CCAGTCATTCCCAACATAGCACCGCAACTCGTCAGC...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTCCAGTGGAGCCTTTGTaGAGGACTACCTTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLPVEPL*RTTLRG
Trigger: GCCTCGCAAGGTAGTCCTGCACAAAGGCTCCACTGG...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CAAATCCTTTTCATGGTAGGAGATAGCTCAGGGGTATCTCCTGCCCATGGTTTTCCAGTGGAGCCTTTGTaGAGGACTACCTTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: QILFMVGDSSGVSPAHGFPVEPL*RTTLRG
Trigger: GCCTCGCAAGGTAGTCCTGCACAAAGGCTCCACTGG...AAAACCATGGGCAGGAGATACCCCTGAGCTATCTCCTACCATGAAAAGGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCCACCACGGAGGTCAATaGCATTCACCGATAGGATCT +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFHHGGQ*HSPIGS
Trigger: AGATCCTATCGGTGAATGGCATTGACCTCCGTGGTG...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTCTGTGGTTCATCATCTaGTCTCGTAGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPLWFII*SRRSWI
Trigger: AATCCATGACCTACGAGAGCAGATGATGAACCACAG...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTCAGCTCTGGACATCTaGTGGGGTGAGGAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLSALDI*WGEEAL
Trigger: GAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGA...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCCCTACCCAGCCTACATaGTGGTTTGCTGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFPTQPT*WFAAQC
Trigger: ACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGG...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCCTACCCAGCCTACATaGTGGTTTGCTGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: PSFILQCLFCPTLWPLCFPTQPT*WFAAQC
Trigger: ACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGG...GAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACGCCCCAGGCTCCGAGTaGATTTGCACCAGATGTAAT +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYAPGSE*ICTRCN
Trigger: ATTACATCTGGTGCAAATGCACTCGGAGCCTGGGGC...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTATGTCCTCAGAGCCATaGGGTAGTGCTGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLMSSEP*GSAGSG
Trigger: CCCACTCCCAGCACTACCGCATGGCTCTGAGGACAT...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCAGGAGGTACTCCACATaGTTCAAGGGAATTGATCTT +
Preference number: 4 (lower is better)
Translates to: ERALDKVCSVSTSLAPGSRRYST*FKGIDL
Trigger: AAGATCAATTCCCTTGAAGCATGTGGAGTACCTCCT...GGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTACGGGTACAGCCTGGTaGACTCAGAAGTTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: PITLMALSLALLPSLHAGTGTAW*TQKLRN
Trigger: GTTTCTTAACTTCTGAGTGCACCAGGCTGTACCCGT...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTCTCCCTCCCATCCTGTaGTACAGCTCGGTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTLPPIL*YSSVEK
Trigger: TTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAG...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCCTCCCTCCCATCCTGTaGTACAGCTCGGTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGLPPIL*YSSVEK
Trigger: TTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAG...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTCAGGAGTGTAAGCTGTaGAGTGTCTCTGTAAACTCC +
Preference number: 4 (lower is better)
Translates to: PITLMALSLALLPSLHAGQECKL*SVSVNS
Trigger: GGAGTTTACAGAGACACTGCACAGCTTACACTCCTG...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GTCATGGCCAAAATTGATCTTCAGTCCTCTTCCACCACGTTGGCATCCTTCAGTGACAAGACATTTCTTTaGCACCGCTGGCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: VMAKIDLQSSSTTLASFSDKTFL*HRWPPL
Trigger: CAGGGGTGGCCAGCGGTGGCAAAGAAATGTCTTGTC...ACTGAAGGATGCCAACGTGGTGGAAGAGGACTGAAGATCAATTTTGGCCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR CCA 90 bp GAGGTAACAAAGCCACGGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACGCATCGTGGGAGCAGTaGGAGCAGCGACAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: EVTKPRFTFFGHEPSIFHASWEQ*EQRQQL
Trigger: GAGCTGCTGTCGCTGCTCCCACTGCTCCCACGATGC...GTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACCGTGGCTTTGTTACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATAGTCCTGAGGAGGGCATaGTCTGAGAACTGTACCCGA +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFIVLRRA*SENCTR
Trigger: TCGGGTACAGTTCTCAGACCATGCCCTCCTCAGGAC...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR CCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTAGCTGAACCAACCATGTaGGCAGGTACAATGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVAEPTM*AGTMLP
Trigger: GGGGAGCATTGTACCTGCCCACATGGTTGGTTCAGC...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR CCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGAGGACTGGCCTGTGCTaGGCTGAACCAACCATGTGG +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGRTGLC*AEPTMW
Trigger: CCACATGGTTGGTTCAGCCCAGCACAGGCCAGTCCT...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR CCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTCCACCGCTTTACTGTaGGAAACCTCTGACACATCA +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKASTALL*ETSDTS
Trigger: TGATGTGTCAGAGGTTTCCCACAGTAAAGCGGTGGA...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTTCTCCAGGAATGTGTTaGTTCCCCACACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFSPGMC*FPTPPA
Trigger: TGCAGGAGGTGTGGGGAACCAACACATTCCTGGAGA...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCTTGCCAGAGAGTAGATaGTTTTCCATTGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSLPESR*FSIGGE
Trigger: TTCTCCACCAATGGAAAACCATCTACTCTCTGGCAA...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CCA 90 bp AGGGACACTGATGAAAGCTCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCTTGCCAGAGAGTAGATaGTTTTCCATTGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RDTDESSWSWGRTPPSFFLPESR*FSIGGE
Trigger: TTCTCCACCAATGGAAAACCATCTACTCTCTGGCAA...GAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGAGCTTTCATCAGTGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTCAGGTTCCGGAGGCCTaGTGTAGTCGTCGTCAACAA +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTQVPEA*CSRRQQ
Trigger: TTGTTGACGACGACTACACCAGGCCTCCGGAACCTG...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTCAGGTTCCGGAGGCCTaGTGTAGTCGTCGTCAACAA +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSQVPEA*CSRRQQ
Trigger: TTGTTGACGACGACTACACCAGGCCTCCGGAACCTG...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCCAGGGGAATAGTGCCTaGGAGAAGCAGGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFQGNSA*EKQAYH
Trigger: GTGATAAGCCTGCTTCTCCCAGGCACTATTCCCCTG...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCCAGGGGAATAGTGCCTaGGAGAAGCAGGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGQGNSA*EKQAYH
Trigger: GTGATAAGCCTGCTTCTCCCAGGCACTATTCCCCTG...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACATCTGGTCTCCTCTCTaGAGCTCCCCACTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYIWSPL*SSPLRS
Trigger: AGACCTAAGTGGGGAGCTCCAGAGAGGAGACCAGAT...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACTTCACCGATAGGATCTaGTCTCCTCTCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYFTDRI*SPLWSS
Trigger: GGAGCTCCAGAGAGGAGACCAGATCCTATCGGTGAA...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAAGCAGCTGCCTGCTCGTaGGATGCACCACGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKAAACS*DAPRRS
Trigger: TGACCTCCGTGGTGCATCCCACGAGCAGGCAGCTGC...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGACTAAGTCCTTGACTTaGCAGCCCACTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKTKSLT*QPTVLA
Trigger: AGCAAGGACAGTGGGCTGCCAAGTCAAGGACTTAGT...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTCTCGTAGTCTCGCTTTaGCCTCGTAGTATGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVLVVSL*PRSMRH
Trigger: GTGCCTCATACTACGAGGCCAAAGCGAGACTACGAG...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCCTCGTAGTCTCGCTTTaGCCTCGTAGTATGAGGCAC +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGLVVSL*PRSMRH
Trigger: GTGCCTCATACTACGAGGCCAAAGCGAGACTACGAG...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCAATGCCTCAAATCCTTTTCATGGTAGGAGATAGCTCAGGGGTATCTCCTGCCCTCGTAGTCTCGCTTTaGCCTCGTAGTATGAGGCAC +
Preference number: 4 (lower is better)
Translates to: AMPQILFMVGDSSGVSPALVVSL*PRSMRH
Trigger: GTGCCTCATACTACGAGGCCAAAGCGAGACTACGAG...GGCAGGAGATACCCCTGAGCTATCTCCTACCATGAAAAGGATTTGAGGCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCGTTCATCCCTACACCTaGCACTTTGAGCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSVHPYT*HFEQTK
Trigger: TTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAAC...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCGTTCATCCCTACACCTaGCACTTTGAGCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTVHPYT*HFEQTK
Trigger: TTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAAC...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTCTCATCTCATCTCTTaGGCAGAAAGCCCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLSHLIS*AESPSE
Trigger: CTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGA...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGCAGCTAAATCAGCTCTaGACATCTGCTGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLQLNQL*TSAGVR
Trigger: CCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTG...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCAAAGCTAATCCCAGGTaGAATCCCCTCCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLKANPR*NPLLSV
Trigger: CACTGACAGGAGGGGATTCCACCTGGGATTAGCTTT...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCAAAGCTAATCCCAGGTaGAATCCCCTCCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFKANPR*NPLLSV
Trigger: CACTGACAGGAGGGGATTCCACCTGGGATTAGCTTT...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTCTCCCCAAACACCATaGGCAAAAGCAATGCTGATG +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKASPQTP*AKAMLM
Trigger: CATCAGCATTGCTTTTGCCCATGGTGTTTGGGGAGA...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACGATGGGGCTTAGTCTaGGCATGCACAGAACCCAGA +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVRWGLV*ACTEPR
Trigger: TCTGGGTTCTGTGCATGCCCAGACTAAGCCCCATCG...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCCAGAAATAAGGCGATaGGGCTTAGTCTGGGCATGC +
Preference number: 4 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLPEIRR*GLVWAC
Trigger: GCATGCCCAGACTAAGCCCCATCGCCTTATTTCTGG...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCAGCTGGGATCAGGAATaGCATTCTGGTGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSSWDQE*HSGVRK
Trigger: TTTTCTGACACCAGAATGCCATTCCTGATCCCAGCT...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATACCAGTTACACGATCTaGCACTTTTCTGAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHTSYTI*HFSERA
Trigger: GGCCCTTTCAGAAAAGTGCCAGATCGTGTAACTGGT...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTAAGCTGAGACCCCCGTaGTGCTACACATTGTACCAG +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVKLRPP*CYTLYQ
Trigger: CTGGTACAATGTGTAGCACCACGGGGGTCTCAGCTT...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACGGCAACGGTGCAGGCTaGCTCCGGGAGGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNGNGAG*LREAGW
Trigger: CCAGCCCGCCTCCCGGAGCCAGCCTGCACCGTTGCC...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCGTCAACCTTGCCACTTaGTTGTCTGTCCTCATGAGT +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAVNLAT*LSVLMS
Trigger: ACTCATGAGGACAGACAACCAAGTGGCAAGGTTGAC...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGCAGGCATTTTTACAATaGGGCCACCCACCGCTGACA +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLQAFLQ*GHPPLT
Trigger: TGTCAGCGGTGGGTGGCCCCATTGTAAAAATGCCTG...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280241.12
ENST00000398309.6
CDS-3UTR CCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCCTTGACTGGCATTCTTaGGTCTTTCCACTGCCACAG +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLLDWHS*VFPLPQ
Trigger: CTGTGGCAGTGGAAAGACCCAAGAATGCCAGTCAAG...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTCGGTCAGTATCTTATaGCCCACCTGTCTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: PITLMALSLALLPSLHAGSVSIL*PTCLLD
Trigger: GTCAAGAAGACAGGTGGGCCATAAGATACTGACCGA...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376104.7
CDS-3UTR CCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCTACATGCACGAGTTCTaGGCCTCTTACTTCGTGGGT +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFYMHEF*ASYFVG
Trigger: ACCCACGAAGTAAGAGGCCCAGAACTCGTGCATGTA...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATAGCTTCTCCGTCTCCTTaGTGCCAGGTTCTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFIASPSP*CQVLLS
Trigger: AGACAGGAGAACCTGGCACCAAGGAGACGGAGAAGC...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404783.7
ENST00000426717.6
CDS-3UTR TCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCACTGTGGGAAACCTCTaGCACATCAACCTCATTCAC +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLTVGNL*HINLIH
Trigger: GTGAATGAGGTTGATGTGTCAGAGGTTTCCCACAGT...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGACTGTGGGAAACCTCTaGCACATCAACCTCATTCAC +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKTVGNL*HINLIH
Trigger: GTGAATGAGGTTGATGTGTCAGAGGTTTCCCACAGT...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCGTGCTTTGGAATTGGTaGGTACCTTCCTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLVLWNW*VPSWRD
Trigger: ATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCAC...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACAGAGTCATTGAAGGCTaGCGAGTTGCGGTGCTATGT +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYRVIEG*RVAVLC
Trigger: ACATAGCACCGCAACTCGTCAGCCTTCAATGACTCT...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCCGTTGGAGAGTCATTaGAGGCTGACGAGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGPLESH*RLTSCG
Trigger: ACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGG...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTCCGTTGGAGAGTCATTaGAGGCTGACGAGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLPLESH*RLTSCG
Trigger: ACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGG...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GTAGCAATGCCTCAAATCCTTTTCATGGTAGGAGATAGCTCAGGGGTATCTCCTCCGTTGGAGAGTCATTaGAGGCTGACGAGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: VAMPQILFMVGDSSGVSPPLESH*RLTSCG
Trigger: ACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGG...AGGAGATACCCCTGAGCTATCTCCTACCATGAAAAGGATTTGAGGCATTGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR TCA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAACCCCACCGACAATGTTaGAGCCCAGGCCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKPHRQC*SPGQWS
Trigger: GCTCCACTGGCCTGGGCTTCAACATTGTCGGTGGGG...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGTCCACCAGCCAGAATaGAGGACACAAAAATACCTT +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPVHQPE*RTQKYL
Trigger: AAGGTATTTTTGTGTCCTTCATTCTGGCTGGTGGAC...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCTTAAAACTAAGTCCTTaGCTTGGCAGCCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFLKLSP*LGSPLS
Trigger: GGACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAA...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTTAAAACTAAGTCCTTaGCTTGGCAGCCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLLKLSP*LGSPLS
Trigger: GGACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAA...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGAAGCCCCATCACTCTaGTGGCTCTATCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTEAPSL*WLYLLL
Trigger: GAGCAAGAGATAGAGCCATCAGAGTGATGGGGCTTC...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCGAAGCCCCATCACTCTaGTGGCTCTATCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPEAPSL*WLYLLL
Trigger: GAGCAAGAGATAGAGCCATCAGAGTGATGGGGCTTC...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGCCGATGTTCTTACTGTaGAGAAGCCCCATCACTCTG +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLPMFLL*RSPITL
Trigger: CAGAGTGATGGGGCTTCTTCACAGTAAGAACATCGG...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GACAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATCCTGGCTCGGAGTCCTaGAGGGCCGGCAGTAGGATC +
Preference number: 4 (lower is better)
Translates to: DNTTNGGVNSIGKDPLTNPGSES*RAGSRI
Trigger: GATCCTACTGCCGGCCCTTCAGGACTCCGAGCCAGG...ATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCATGGACTTGCTGTCTaGATCAGCCATGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFHGLAV*ISHEPF
Trigger: AAAGGGCTCATGGCTGATTCAGACAGCAAGTCCATG...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTCATGGACTTGCTGTCTaGATCAGCCATGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVHGLAV*ISHEPF
Trigger: AAAGGGCTCATGGCTGATTCAGACAGCAAGTCCATG...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTTTTCAGGTCTCAGTTTaGTCCAGCTGGATTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVFQVSV*SSWIEA
Trigger: GGCCTCAATCCAGCTGGATCAAACTGAGACCTGAAA...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR TCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCAGTCGAGGTAAGGAATaGTCATGTGGAGCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGSRGKE*SCGASS
Trigger: TGAGGACGCTCCACATGATCATTCCTTACCTCGACT...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCTTCCCTCTGTCAGTTTaGAAATGCATTGATCTCTGT +
Preference number: 4 (lower is better)
Translates to: ERALDKVCSVSTSLAPGSFPLSV*KCIDLC
Trigger: ACAGAGATCAATGCATTTTCAAACTGACAGAGGGAA...GGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398309.6
CDS-3UTR GCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTTCCTTTGGTCAGCTCTaGACAGAAATGTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVSFGQL*TEMSPP
Trigger: GGGAGGAGACATTTCTGTGCAGAGCTGACCAAAGGA...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR GCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTTGCTTGGTGAGGTATaGATTCATACTGCACTGATG +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTLLGEV*IHTALM
Trigger: CATCAGTGCAGTATGAATGCATACCTCACCAAGCAA...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR GCA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCCTAAAGTGCCATTGTTaGCAGAGAGTAGATGGTTTT +
Preference number: 4 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSLKCHC*QRVDGF
Trigger: AAAACCATCTACTCTCTGGCAACAATGGCACTTTAG...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR GCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTATAGTTTGTTCACAGTaGTGTAAACAGGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSIVCSQ*CKQVPE
Trigger: CTCCGGAACCTGTTTACAGCACTGTGAACAAACTAT...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTATAGTTTGTTCACAGTaGTGTAAACAGGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPIVCSQ*CKQVPE
Trigger: CTCCGGAACCTGTTTACAGCACTGTGAACAAACTAT...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCGCTGACGAGTTGCGGTaGTATGTTGGGAATGACTGG +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPADELR*YVGNDW
Trigger: CCAGTCATTCCCAACATAGCACCGCAACTCGTCAGC...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCCCAGTGGAGCCTTTGTaGAGGACTACCTTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTPVEPL*RTTLRG
Trigger: GCCTCGCAAGGTAGTCCTGCACAAAGGCTCCACTGG...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCCCAGTGGAGCCTTTGTaGAGGACTACCTTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFPVEPL*RTTLRG
Trigger: GCCTCGCAAGGTAGTCCTGCACAAAGGCTCCACTGG...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATCTGTGGTTCATCATCTaGTCTCGTAGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHLWFII*SRRSWI
Trigger: AATCCATGACCTACGAGAGCAGATGATGAACCACAG...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTATGACTCTCCTGGCTTaGCACCACTCATCATCAGAG +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFMTLLA*HHSSSE
Trigger: CTCTGATGATGAGTGGTGGCAAGCCAGGAGAGTCAT...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCATGACTCTCCTGGCTTaGCACCACTCATCATCAGAG +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGMTLLA*HHSSSE
Trigger: CTCTGATGATGAGTGGTGGCAAGCCAGGAGAGTCAT...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTGGATCACTGGTTTCCTaGTCACTCTGCTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFGSLVS*SLCSLF
Trigger: GAACAAGGAGCAGAGTGAGCAGGAAACCAGTGATCC...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCCAAAGTGATAGTCTCTaGCATCCACCTCGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFQSDSL*HPPRSL
Trigger: GAGACTACGAGGTGGATGGCAGAGACTATCACTTTG...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCAAAGTGATAGTCTCTaGCATCCACCTCGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKQSDSL*HPPRSL
Trigger: GAGACTACGAGGTGGATGGCAGAGACTATCACTTTG...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTGTGTTTGCCTCTTTCTaGTACAAATCTCACAGACTG +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSVFASF*YKSHRL
Trigger: CAGTCTGTGAGATTTGTAGCAGAAAGAGGCAAACAC...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCATGAAAGGCCCAGATTaGTCTTCAATAACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSMKGPD*SSITSL
Trigger: CAAGCTTGTTATTGAAGAGCAATCTGGGCCTTTCAT...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGGCTTAGTCTGGGCATaGACAGAACCCAGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTGLVWA*TEPRVE
Trigger: CTCTACTCTGGGTTCTGTGCATGCCCAGACTAAGCC...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTGGCTTAGTCTGGGCATaGACAGAACCCAGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSGLVWA*TEPRVE
Trigger: CTCTACTCTGGGTTCTGTGCATGCCCAGACTAAGCC...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCTACATGCTGGTTTGCTaGACAGTGTGGCAGAATCCC +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFYMLVC*TVWQNP
Trigger: GGGATTCTGCCACACTGTGCAGCAAACCAGCATGTA...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCCTACCCAGCCTACATaGTGGTTTGCTGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPPTQPT*WFAAQC
Trigger: ACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGG...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AAGATACAATCATTGACCCTGAGTCTGCCATCCTCTGCTGCAGCACCTCCTGGTGAAACACTTGGCCGTTaGATAGCGAAAGCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: KIQSLTLSLPSSAAAPPGETLGR*IAKAGN
Trigger: GTTACCAGCTTTCGCTATGCAACGGCCAAGTGTTTC...ACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTCAGGGTCAATGATTGTATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529401.5
CDS-3UTR GCA 90 bp GTAGCAATGCCTCAAATCCTTTTCATGGTAGGAGATAGCTCAGGGGTATCTCCTCTCAGGGGTATCTCCTaGCCATGGTTTTGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: VAMPQILFMVGDSSGVSPLRGIS*PWFWVG
Trigger: CCCTACCCAAAACCATGGGCAGGAGATACCCCTGAG...AGGAGATACCCCTGAGCTATCTCCTACCATGAAAAGGATTTGAGGCATTGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCGCATGTAAAAGGATGTaGCCGCCTACTCTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGACKRM*PPTLPS
Trigger: ACTGGGGAGAGTAGGCGGGCACATCCTTTTACATGC...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR CCA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATGCATCGTGGGAGCAGTaGGAGCAGCGACAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHASWEQ*EQRQQL
Trigger: GAGCTGCTGTCGCTGCTCCCACTGCTCCCACGATGC...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR CCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTATCTCCAGGAATGTGTTaGTTCCCCACACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVSPGMC*FPTPPA
Trigger: TGCAGGAGGTGTGGGGAACCAACACATTCCTGGAGA...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACAGGGGAATAGTGCCTaGGAGAAGCAGGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVQGNSA*EKQAYH
Trigger: GTGATAAGCCTGCTTCTCCCAGGCACTATTCCCCTG...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTCAGGGGAATAGTGCCTaGGAGAAGCAGGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTQGNSA*EKQAYH
Trigger: GTGATAAGCCTGCTTCTCCCAGGCACTATTCCCCTG...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTTATGTTGGGAATGACTaGTCATCTCAGAGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSYVGND*SSQSQV
Trigger: TACCTGACTCTGAGATGACCAGTCATTCCCAACATA...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCATCTGGTCTCCTCTCTaGAGCTCCCCACTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPIWSPL*SSPLRS
Trigger: AGACCTAAGTGGGGAGCTCCAGAGAGGAGACCAGAT...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTAATCTGGTCTCCTCTCTaGAGCTCCCCACTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVIWSPL*SSPLRS
Trigger: AGACCTAAGTGGGGAGCTCCAGAGAGGAGACCAGAT...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCTTCACCGATAGGATCTaGTCTCCTCTCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPFTDRI*SPLWSS
Trigger: GGAGCTCCAGAGAGGAGACCAGATCCTATCGGTGAA...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTATTCACCGATAGGATCTaGTCTCCTCTCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVFTDRI*SPLWSS
Trigger: GGAGCTCCAGAGAGGAGACCAGATCCTATCGGTGAA...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTGTAGGTCATGGATTTTaGCCTCAAATCGAGCGTAAT +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSVGHGF*PQIERN
Trigger: ATTACGCTCGATTTGAGGCCAAAATCCATGACCTAC...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAGTAGGTCATGGATTTTaGCCTCAAATCGAGCGTAAT +
Preference number: 4 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPVGHGF*PQIERN
Trigger: ATTACGCTCGATTTGAGGCCAAAATCCATGACCTAC...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATTGCTCTCGTAGGTCATaGATTTTGGCCTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHCSRRS*ILASNR
Trigger: TCGATTTGAGGCCAAAATCCATGACCTACGAGAGCA...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCACTAAGTCCTTGACTTaGCAGCCCACTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFTKSLT*QPTVLA
Trigger: AGCAAGGACAGTGGGCTGCCAAGTCAAGGACTTAGT...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACTCGTAGTCTCGCTTTaGCCTCGTAGTATGAGGCAC +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVLVVSL*PRSMRH
Trigger: GTGCCTCATACTACGAGGCCAAAGCGAGACTACGAG...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTCTCGTAGTCTCGCTTTaGCCTCGTAGTATGAGGCAC +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSLVVSL*PRSMRH
Trigger: GTGCCTCATACTACGAGGCCAAAGCGAGACTACGAG...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCGATCATAGGTTTTCTTaGCTTGTTCCTCTGTTAGAC +
Preference number: 4 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSDHRFS*LVPLLD
Trigger: GTCTAACAGAGGAACAAGCCAAGAAAACCTATGATC...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTTCTCATCTCATCTCTTaGGCAGAAAGCCCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVSHLIS*AESPSE
Trigger: CTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGA...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGTCTCATCTCATCTCTTaGGCAGAAAGCCCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKSHLIS*AESPSE
Trigger: CTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGA...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTCTCATCTCATCTCTTaGGCAGAAAGCCCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLSHLIS*AESPSE
Trigger: CTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGA...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCGCTCTGGACATCTGCTaGGGTGAGGAGGCTCTCATC +
Preference number: 4 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTALDIC*GEEALI
Trigger: GATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGC...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACCAGAAATAAGGCGATaGGGCTTAGTCTGGGCATGC +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVPEIRR*GLVWAC
Trigger: GCATGCCCAGACTAAGCCCCATCGCCTTATTTCTGG...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTCCAGAAATAAGGCGATaGGGCTTAGTCTGGGCATGC +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSPEIRR*GLVWAC
Trigger: GCATGCCCAGACTAAGCCCCATCGCCTTATTTCTGG...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAGCAACACTAGTAAATaGAAAGCACATCACACGACC +
Preference number: 4 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPSNTSK*KAHHTT
Trigger: GGTCGTGTGATGTGCTTTCCATTTACTAGTGTTGCT...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTAGCAAGCCTTCAGGTTaGAGAGAGCTCTGGACAAAG +
Preference number: 4 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLSKPSG*RELWTK
Trigger: CTTTGTCCAGAGCTCTCTCCAACCTGAAGGCTTGCT...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGTGGAGAGTTCTTTCCTaGCTCGGAGTCCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGWRVLS*LGVLKG
Trigger: GCCCTTCAGGACTCCGAGCCAGGAAAGAACTCTCCA...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTATCTCGAGCCAGAGGTTaGAGAGTTCTTTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVSRARG*RVLSWL
Trigger: GAGCCAGGAAAGAACTCTCCAACCTCTGGCTCGAGA...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCAGTCTGCCATCCCATTaGGAGTCAACCTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGSLPSH*ESTLPL
Trigger: AAGTGGCAAGGTTGACTCCCAATGGGATGGCAGACT...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCCTAACGGGTACAGCCTaGTGCACTCAGAAGTTAAGA +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLLTGTA*CTQKLR
Trigger: TCTTAACTTCTGAGTGCACCAGGCTGTACCCGTTAG...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACCTTGACTGGCATTCTTaGGTCTTTCCACTGCCACAG +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYLDWHS*VFPLPQ
Trigger: CTGTGGCAGTGGAAAGACCCAAGAATGCCAGTCAAG...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR CCA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTTACATGCACGAGTTCTaGGCCTCTTACTTCGTGGGT +
Preference number: 4 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLYMHEF*ASYFVG
Trigger: ACCCACGAAGTAAGAGGCCCAGAACTCGTGCATGTA...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ATGGGACTGAACATCAAACTCCAGCCATTGGATTGTAGGGCTTTTAAGCTACCTGGCTTCTGTAAGACATaGAGACTGGAGGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: MGLNIKLQPLDCRAFKLPGFCKT*RLEGRG
Trigger: CCCCCGACCCTCCAGTCTCCATGTCTTACAGAAGCC...AGGTAGCTTAAAAGCCCTACAATCCAATGGCTGGAGTTTGATGTTCAGTCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR CCA 90 bp GTAGCAATGCCTCAAATCCTTTTCATGGTAGGAGATAGCTCAGGGGTATCTCCTGGTATCTCCTGCCCATaGTTTTGGGTAGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VAMPQILFMVGDSSGVSPGISCP*FWVGLV
Trigger: CACCAGCCCTACCCAAAACCATGGGCAGGAGATACC...AGGAGATACCCCTGAGCTATCTCCTACCATGAAAAGGATTTGAGGCATTGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR TCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCAATTTCTGTCCCATTaGCATAAGGAATTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSQFLSH*HKELCP
Trigger: TGGACACAATTCCTTATGTCAATGGGACAGAAATTG...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCACTGTGGGAAACCTCTaGCACATCAACCTCATTCAC +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGTVGNL*HINLIH
Trigger: GTGAATGAGGTTGATGTGTCAGAGGTTTCCCACAGT...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGACTGTGGGAAACCTCTaGCACATCAACCTCATTCAC +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLTVGNL*HINLIH
Trigger: GTGAATGAGGTTGATGTGTCAGAGGTTTCCCACAGT...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACACTGTGGGAAACCTCTaGCACATCAACCTCATTCAC +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYTVGNL*HINLIH
Trigger: GTGAATGAGGTTGATGTGTCAGAGGTTTCCCACAGT...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTACTGTGGGAAACCTCTaGCACATCAACCTCATTCAC +
Preference number: 4 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLTVGNL*HINLIH
Trigger: GTGAATGAGGTTGATGTGTCAGAGGTTTCCCACAGT...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTGTGCTTTGGAATTGGTaGGTACCTTCCTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLVLWNW*VPSWRD
Trigger: ATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCAC...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACGTGCTTTGGAATTGGTaGGTACCTTCCTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYVLWNW*VPSWRD
Trigger: ATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCAC...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTAAGAGTCATTGAAGGCTaGCGAGTTGCGGTGCTATGT +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVRVIEG*RVAVLC
Trigger: ACATAGCACCGCAACTCGTCAGCCTTCAATGACTCT...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCCCGTTGGAGAGTCATTaGAGGCTGACGAGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFPLESH*RLTSCG
Trigger: ACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGG...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTCCCCACCGACAATGTTaGAGCCCAGGCCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILPHRQC*SPGQWS
Trigger: GCTCCACTGGCCTGGGCTTCAACATTGTCGGTGGGG...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTTTAAAACTAAGTCCTTaGCTTGGCAGCCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVLKLSP*LGSPLS
Trigger: GGACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAA...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACTTAAAACTAAGTCCTTaGCTTGGCAGCCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYLKLSP*LGSPLS
Trigger: GGACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAA...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCGCTCATAGGAAAGAATaGGGTCTTCTTGTCCTCGTT +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLAHRKE*GLLVLV
Trigger: AACGAGGACAAGAAGACCTCATTCTTTCCTATGAGC...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACATATCAAGTCGTCATTaGTCCGATCCTTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYISSRH*SDPSWA
Trigger: GGCCCATGAAGGATCGGATCAATGACGACTTGATAT...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCATATCAAGTCGTCATTaGTCCGATCCTTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: PSFILQCLFCPTLWPLCFISSRH*SDPSWA
Trigger: GGCCCATGAAGGATCGGATCAATGACGACTTGATAT...GAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTATATCAAGTCGTCATTaGTCCGATCCTTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLISSRH*SDPSWA
Trigger: GGCCCATGAAGGATCGGATCAATGACGACTTGATAT...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GATAGGGACACTGATGAAAGCTCATGGAGCTGGGGACGGACGCCTCCAAGCTTCCTTGATAGCATTTCCTaGTACATCAAGTATACAGTG +
Preference number: 4 (lower is better)
Translates to: DRDTDESSWSWGRTPPSFLDSIS*YIKYTV
Trigger: CACTGTATACTTGATGTATCAGGAAATGCTATCAAG...GAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGAGCTTTCATCAGTGTCCCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR TCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTGAGGGAATCCAGATaGAAGGCCCAGATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGLRESR*KAQIAL
Trigger: AAGAGCAATCTGGGCCTTTCATCTGGATTCCCTCAA...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTTGAGGGAATCCAGATaGAAGGCCCAGATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLLRESR*KAQIAL
Trigger: AAGAGCAATCTGGGCCTTTCATCTGGATTCCCTCAA...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTTTGAGGGAATCCAGATaGAAGGCCCAGATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLLRESR*KAQIAL
Trigger: AAGAGCAATCTGGGCCTTTCATCTGGATTCCCTCAA...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCTTGAGGGAATCCAGATaGAAGGCCCAGATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFLRESR*KAQIAL
Trigger: AAGAGCAATCTGGGCCTTTCATCTGGATTCCCTCAA...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCGGACATCTGCTGGGGTaGGGAGGCTCTCATCTCATC +
Preference number: 4 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFGHLLG*GGSHLI
Trigger: GATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCC...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTTCCAAAAATATCCATaGGGGCAACTCATTAAGGGA +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTFQKYP*GQLIKG
Trigger: TCCCTTAATGAGTTGCCCTCATGGATATTTTTGGAA...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCAATTGTCTTTCCTTGTaGCTCTATCTCTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSNCLSL*LYLFAL
Trigger: CAGAGCAAAGAGATAGAGTCACAAGGAAAGACAATT...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCAGTGGTTATTATCACTaGAAAGTCTCTCCCCAAACA +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTSGYYH*KVSPQT
Trigger: TGTTTGGGGAGAGACTTTTCAGTGATAATAACCACT...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCAGTGGTTATTATCACTaGAAAGTCTCTCCCCAAACA +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSSGYYH*KVSPQT
Trigger: TGTTTGGGGAGAGACTTTTCAGTGATAATAACCACT...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACCGATGTTCTTACTGTaGAGAAGCCCCATCACTCTG +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFIPMFLL*RSPITL
Trigger: CAGAGTGATGGGGCTTCTTCACAGTAAGAACATCGG...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTGTTGGTGGTTCAATTTaGTTGTACTTAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PITLMALSLALLPSLHAGVGGSI*LYLATA
Trigger: TGCTGTGGCTAAGTACAATCAAATTGAACCACCAAC...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGGATCTGGCACTTTTCTaGAAGGGCCCAGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGDLALF*KGPACV
Trigger: CACACATGCTGGGCCCTTTCAGAAAAGTGCCAGATC...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCCAGCTGTACAAGAAATaGTTTCCAAAGCACAGGTTT +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTQLYKK*FPKHRF
Trigger: AAACCTGTGCTTTGGAAATCATTTCTTGTACAGCTG...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGGGTTGTCTGTCCTCATaGGTTGCTAGGGAGATACTA +
Preference number: 4 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKGCLSS*VAREIL
Trigger: TAGTATCTCCCTAGCAACTCATGAGGACAGACAACC...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTAAGTCGAGGTAAGGAATaGTCATGTGGAGCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVSRGKE*SCGASS
Trigger: TGAGGACGCTCCACATGATCATTCCTTACCTCGACT...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCAGTCGAGGTAAGGAATaGTCATGTGGAGCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGSRGKE*SCGASS
Trigger: TGAGGACGCTCCACATGATCATTCCTTACCTCGACT...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCAGAGAGGTTCTTTTCTaGTACATGCACGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFREVLF*YMHEFW
Trigger: CCAGAACTCGTGCATGTATCAGAAAAGAACCTCTCT...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCGGAGCGTCCTCATCTTaGTATCGATACTTCTTCACG +
Preference number: 4 (lower is better)
Translates to: PSFILQCLFCPTLWPLCFGASSS*YRYFFT
Trigger: CGTGAAGAAGTATCGATATCAAGATGAGGACGCTCC...GAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398309.6
CDS-3UTR TCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACGGAGCGTCCTCATCTTaGTATCGATACTTCTTCACG +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYGASSS*YRYFFT
Trigger: CGTGAAGAAGTATCGATATCAAGATGAGGACGCTCC...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398309.6
ENST00000524982.5
CDS-3UTR GCA 90 bp TATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTGGCAGAGTATCTTTGACAGCTaGTATAAGCAGTGCATCGTG +
Preference number: 4 (lower is better)
Translates to: YLLLSYPAYMLVCCTVWQSIFDS*YKQCIV
Trigger: CACGATGCACTGCTTATAGCAGCTGTCAAAGATACT...CTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR GCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCTCTGCCATCCTCTGCTaGAGCACCTCCTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPSAILC*STSWYN
Trigger: ATTATACCAGGAGGTGCTGCAGCAGAGGATGGCAGA...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTATCTGCCATCCTCTGCTaGAGCACCTCCTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVSAILC*STSWYN
Trigger: ATTATACCAGGAGGTGCTGCAGCAGAGGATGGCAGA...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTCACCACGGAGGTCAATaGCATTCACCGATAGGATCT +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSHHGGQ*HSPIGS
Trigger: AGATCCTATCGGTGAATGGCATTGACCTCCGTGGTG...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTTGCCTGCTCGTGGGATaGACCACGGAGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSCLLVG*TTEVNA
Trigger: GGCATTGACCTCCGTGGTGCATCCCACGAGCAGGCA...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTTGCCTGCTCGTGGGATaGACCACGGAGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEICLLVG*TTEVNA
Trigger: GGCATTGACCTCCGTGGTGCATCCCACGAGCAGGCA...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATTGCCTGCTCGTGGGATaGACCACGGAGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHCLLVG*TTEVNA
Trigger: GGCATTGACCTCCGTGGTGCATCCCACGAGCAGGCA...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTAGTGCAGCAGCTGCCTaGTCGTGGGATGCACCACGG +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILSAAAA*SWDAPR
Trigger: CCGTGGTGCATCCCACGAGCAGGCAGCTGCTGCACT...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTACACAGTGCAGCAGCTGCCTaGTCGTGGGATGCACCACGG +
Preference number: 4 (lower is better)
Translates to: YETDIRDSQQEGFRAQVHSAAAA*SWDAPR
Trigger: CCGTGGTGCATCCCACGAGCAGGCAGCTGCTGCACT...GTGTACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCCTGTGGTTCATCATCTaGTCTCGTAGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLLWFII*SRRSWI
Trigger: AATCCATGACCTACGAGAGCAGATGATGAACCACAG...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTATGACTCTCCTGGCTTaGCACCACTCATCATCAGAG +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSMTLLA*HHSSSE
Trigger: CTCTGATGATGAGTGGTGGCAAGCCAGGAGAGTCAT...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATAGGATCACTGGTTTCCTaGTCACTCTGCTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFIGSLVS*SLCSLF
Trigger: GAACAAGGAGCAGAGTGAGCAGGAAACCAGTGATCC...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACCAAAGTGATAGTCTCTaGCATCCACCTCGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYQSDSL*HPPRSL
Trigger: GAGACTACGAGGTGGATGGCAGAGACTATCACTTTG...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCACAAATCTCACAGACTaGACACTGGTTCCATATAAA +
Preference number: 4 (lower is better)
Translates to: ERALDKVCSVSTSLAPGSTNLTD*TLVPYK
Trigger: TTTATATGGAACCAGTGTGCAGTCTGTGAGATTTGT...GGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCATGAAAGGCCCAGATTaGTCTTCAATAACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSMKGPD*SSITSL
Trigger: CAAGCTTGTTATTGAAGAGCAATCTGGGCCTTTCAT...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCATGAAAGGCCCAGATTaGTCTTCAATAACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTMKGPD*SSITSL
Trigger: CAAGCTTGTTATTGAAGAGCAATCTGGGCCTTTCAT...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCGTGTGGCAGAATCCCTaGCAGGTCTGGATGTACCCC +
Preference number: 4 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFVWQNP*QVWMYP
Trigger: GGGGTACATCCAGACCTGGCAGGGATTCTGCCACAC...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCGCTCTGGACAAAGTTTaGAGTGTTAGCACCAGTCTG +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGALDKV*SVSTSL
Trigger: CAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGC...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCGAGGAGGAAGAGGTTTaGTATCAGAATAATTGGGGC +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLEEEEV*YQNNWG
Trigger: GCCCCAATTATTCTGATAGCAAACCTCTTCCTCCTC...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GTTGGCATCCTTCAGTTAAAGGAACAACAGCCTTTCACCTGGTGTGGTCAGTGGCTTGGGTCTTTCCACTaGCACAGGAGTCAATATCTC +
Preference number: 4 (lower is better)
Translates to: VGILQLKEQQPFTWCGQWLGSFH*HRSQYL
Trigger: GAGATATTGACTCCTGTGGCAGTGGAAAGACCCAAG...CCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAACTGAAGGATGCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR GCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGTCTGGGCTGGGCATCTaGCTTGGTTTTGAGTTGTCG +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGSGLGI*LGFELS
Trigger: CGACAACTCAAAACCAAGGCAGATGCCCAGCCCAGA...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR GCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCTTTTCTGATACATaGACGAGTTCTGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAFFSDT*TSSGPL
Trigger: AAGAGGCCCAGAACTCGTGCATGTATCAGAAAAGAA...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTACACCAGGCCCAGAACCCTCCCAGAACCCTCTCTGTaGCAAATGTCAGACAATTTA +
Preference number: 4 (lower is better)
Translates to: GILNRKVLGHKYTRPRTLPEPSL*QMSDNL
Trigger: TAAATTGTCTGACATTTGGCACAGAGAGGGTTCTGG...GAGGGTTCTGGGCCTGGTGTACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTTGCTGCAGCACCTCCTaGTATAATCTTCGTAATAAA +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPCCSTS*YNLRNK
Trigger: TTTATTACGAAGATTATACCAGGAGGTGCTGCAGCA...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTGTGAGTAATATCAGGTaGACCATAAGGATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPVSNIR*TIRISH
Trigger: ATGACTGATCCTTATGGTCCACCTGATATTACTCAC...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATTTGCCAGAGAGTAGATaGTTTTCCATTGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHLPESR*FSIGGE
Trigger: TTCTCCACCAATGGAAAACCATCTACTCTCTGGCAA...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCCAGGTTCCGGAGGCCTaGTGTAGTCGTCGTCAACAA +
Preference number: 4 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTQVPEA*CSRRQQ
Trigger: TTGTTGACGACGACTACACCAGGCCTCCGGAACCTG...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTTTGTATGTTGGGAATGACTaGTCATCTCAGAGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: SWSWGRTPPSFFSRVTALYVGND*SSQSQV
Trigger: TACCTGACTCTGAGATGACCAGTCATTCCCAACATA...CAAAGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp GACAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATGCAGCTGCCTGCTCGTaGGATGCACCACGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: DNTTNGGVNSIGKDPLTNAAACS*DAPRRS
Trigger: TGACCTCCGTGGTGCATCCCACGAGCAGGCAGCTGC...ATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CCA 90 bp TATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTGGCAGGTAGGTCATGGATTTTaGCCTCAAATCGAGCGTAAT +
Preference number: 4 (lower is better)
Translates to: YLLLSYPAYMLVCCTVWQVGHGF*PQIERN
Trigger: ATTACGCTCGATTTGAGGCCAAAATCCATGACCTAC...CTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTGTAGGTCATGGATTTTaGCCTCAAATCGAGCGTAAT +
Preference number: 4 (lower is better)
Translates to: PITLMALSLALLPSLHAGVGHGF*PQIERN
Trigger: ATTACGCTCGATTTGAGGCCAAAATCCATGACCTAC...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTTTGGACACTGTAGGTCATGGATTTTaGCCTCAAATCGAGCGTAAT +
Preference number: 4 (lower is better)
Translates to: SWGRTPPSFFSRVTALDTVGHGF*PQIERN
Trigger: ATTACGCTCGATTTGAGGCCAAAATCCATGACCTAC...AGTGTCCAAAGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp GGCTACCAGAAATGTGAGCGAAAGGCAAGTAAAAGCCGCAGAGGAGGCTGCATTTGCTCTCGTAGGTCATaGATTTTGGCCTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: GYQKCERKASKSRRGGCICSRRS*ILASNR
Trigger: TCGATTTGAGGCCAAAATCCATGACCTACGAGAGCA...AATGCAGCCTCCTCTGCGGCTTTTACTTGCCTTTCGCTCACATTTCTGGTAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR CCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCTGCTCTCGTAGGTCATaGATTTTGGCCTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFCSRRS*ILASNR
Trigger: TCGATTTGAGGCCAAAATCCATGACCTACGAGAGCA...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGTGCTCTCGTAGGTCATaGATTTTGGCCTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKCSRRS*ILASNR
Trigger: TCGATTTGAGGCCAAAATCCATGACCTACGAGAGCA...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCAAGAACAGCACAGCAAATTAAAGAGATACCAAGCATTGAAGAGCAGCCAGAAGGGAGCGTTTCTGATTaGTTCGCAGGGATCCGGACC +
Preference number: 4 (lower is better)
Translates to: ARTAQQIKEIPSIEEQPEGSVSD*FAGIRT
Trigger: GGTCCGGATCCCTGCGAACCAATCAGAAACGCTCCC...TTCTGGCTGCTCTTCAATGCTTGGTATCTCTTTAATTTGCTGTGCTGTTCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR CCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTACTAAGTCCTTGACTTaGCAGCCCACTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTTKSLT*QPTVLA
Trigger: AGCAAGGACAGTGGGCTGCCAAGTCAAGGACTTAGT...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTCTCGTAGTCTCGCTTTaGCCTCGTAGTATGAGGCAC +
Preference number: 4 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLLVVSL*PRSMRH
Trigger: GTGCCTCATACTACGAGGCCAAAGCGAGACTACGAG...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTGATCATAGGTTTTCTTaGCTTGTTCCTCTGTTAGAC +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPDHRFS*LVPLLD
Trigger: GTCTAACAGAGGAACAAGCCAAGAAAACCTATGATC...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCACCTCTGTTTCCTTCATaGCTTCATACAGTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPPLFPS*LHTVCV
Trigger: AACACAAACTGTATGAAGCCATGAAGGAAACAGAGG...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTATCTCATCTCATCTCTTaGGCAGAAAGCCCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVSHLIS*AESPSE
Trigger: CTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGA...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCAGCTAAATCAGCTCTaGACATCTGCTGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGQLNQL*TSAGVR
Trigger: CCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTG...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATAAAAGCTAATCCCAGGTaGAATCCCCTCCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFIKANPR*NPLLSV
Trigger: CACTGACAGGAGGGGATTCCACCTGGGATTAGCTTT...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCAAAGCTAATCCCAGGTaGAATCCCCTCCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGKANPR*NPLLSV
Trigger: CACTGACAGGAGGGGATTCCACCTGGGATTAGCTTT...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGTCTCCCCAAACACCATaGGCAAAAGCAATGCTGATG +
Preference number: 4 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKSPQTP*AKAMLM
Trigger: CATCAGCATTGCTTTTGCCCATGGTGTTTGGGGAGA...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCGAACCCAGAGTAGAGTaGTTATTATCACTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSEPRVE*LLSLKS
Trigger: ACTTTTCAGTGATAATAACCACTCTACTCTGGGTTC...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTAAGAAGTTATCGTGGTaGCCTAAAAATAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PITLMALSLALLPSLHAGKKLSW*PKNRAG
Trigger: CCCAGCTCTATTTTTAGGCCACCACGATAACTTCTT...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCGCACCAGATGTAATCTaGGTAACTTTCATGCCATTT +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSAPDVI*VTFMPF
Trigger: AAATGGCATGAAAGTTACCCAGATTACATCTGGTGC...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGAAGCTGAGACCCCCGTaGTGCTACACATTGTACCAG +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGKLRPP*CYTLYQ
Trigger: CTGGTACAATGTGTAGCACCACGGGGGTCTCAGCTT...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTTGCTATCAGAATAATTaGGGCCAGAGTCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPCYQNN*GQSLPL
Trigger: TAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCA...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTGCTATCAGAATAATTaGGGCCAGAGTCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKACYQNN*GQSLPL
Trigger: TAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCA...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCGTCAACCTTGCCACTTaGTTGTCTGTCCTCATGAGT +
Preference number: 4 (lower is better)
Translates to: PSFILQCLFCPTLWPLCFVNLAT*LSVLMS
Trigger: ACTCATGAGGACAGACAACCAAGTGGCAAGGTTGAC...GAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTAGTCTGCCATCCCATTaGGAGTCAACCTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSSLPSH*ESTLPL
Trigger: AAGTGGCAAGGTTGACTCCCAATGGGATGGCAGACT...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTAGTCTGCCATCCCATTaGGAGTCAACCTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTSLPSH*ESTLPL
Trigger: AAGTGGCAAGGTTGACTCCCAATGGGATGGCAGACT...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCTACTTAGTACAGTGGTaGACAGGCATCCAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGYLVQW*TGIQAG
Trigger: CCCTGCTTGGATGCCTGTCCACCACTGTACTAAGTA...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTACATGCACGAGTTCTaGGCCTCTTACTTCGTGGGT +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSYMHEF*ASYFVG
Trigger: ACCCACGAAGTAAGAGGCCCAGAACTCGTGCATGTA...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTAGTTACTTATATTTCTaGAGAGCCCCGGTGTTATCC +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPSYLYF*RAPVLS
Trigger: GGATAACACCGGGGCTCTCCAGAAATATAAGTAACT...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398309.6
CDS-3UTR CCA 90 bp GTTAAAGGAACAACAGCCTTTCACCTGGTGTGGTCAGTGGATTCGCATACAAGGGCCTTTCACCTGGTGTaGTCAGTGGATTCGCATACA +
Preference number: 4 (lower is better)
Translates to: VKGTTAFHLVWSVDSHTRAFHLV*SVDSHT
Trigger: TGTATGCGAATCCACTGACCACACCAGGTGAAAGGC...CCTTGTATGCGAATCCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR TCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTAGCTGTGTTGCTTGGTaGGGTATGCATTCATACTGC +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTSCVAW*GMHSYC
Trigger: GCAGTATGAATGCATACCTCACCAAGCAACACAGCT...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR TCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAATGGGCCCCCTGGTCCTaGGGAGGGCATGGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKWAPWS*GGHGLR
Trigger: TCTCAGACCATGCCCTCCTCAGGACCAGGGGGCCCA...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR TCA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACTGGGCCCCCTGGTCCTaGGGAGGGCATGGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNWAPWS*GGHGLR
Trigger: TCTCAGACCATGCCCTCCTCAGGACCAGGGGGCCCA...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR TCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAATGGCCTGTGCTGGGCTaGACCAACCATGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQWPVLG*TNHVGR
Trigger: CCTGCCCACATGGTTGGTTCAGCCCAGCACAGGCCA...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR TCA 90 bp CAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTACACCAGGCCCGTGCTTTGGAATTGGTaGGTACCTTCCTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: QILGILNRKVLGHKYTRPVLWNW*VPSWRD
Trigger: ATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCAC...GGGCCTGGTGTACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR TCA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAACCGTTGGAGAGTCATTaGAGGCTGACGAGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKPLESH*RLTSCG
Trigger: ACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGG...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTGTCCACCAGCCAGAATaGAGGACACAAAAATACCTT +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFVHQPE*RTQKYL
Trigger: AAGGTATTTTTGTGTCCTTCATTCTGGCTGGTGGAC...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTTTAAAACTAAGTCCTTaGCTTGGCAGCCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTLKLSP*LGSPLS
Trigger: GGACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAA...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTATATCAAGTCGTCATTaGTCCGATCCTTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSISSRH*SDPSWA
Trigger: GGCCCATGAAGGATCGGATCAATGACGACTTGATAT...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTATATCAAGTCGTCATTaGTCCGATCCTTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: PITDVGNGKADEVRVLAIISSRH*SDPSWA
Trigger: GGCCCATGAAGGATCGGATCAATGACGACTTGATAT...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTGAGGGAATCCAGATaGAAGGCCCAGATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSLRESR*KAQIAL
Trigger: AAGAGCAATCTGGGCCTTTCATCTGGATTCCCTCAA...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTGGACATCTGCTGGGGTaGGGAGGCTCTCATCTCATC +
Preference number: 4 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEIGHLLG*GGSHLI
Trigger: GATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCC...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGAAGGGATGTGCTGCATaGGAGTGTATCACTAATGTG +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLKGCAA*ECITNV
Trigger: CACATTAGTGATACACTCTCATGCAGCACATCCCTT...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGAAGGGATGTGCTGCATaGGAGTGTATCACTAATGTG +
Preference number: 4 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKKGCAA*ECITNV
Trigger: CACATTAGTGATACACTCTCATGCAGCACATCCCTT...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTTTCCAAAAATATCCATaGGGGCAACTCATTAAGGGA +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPFQKYP*GQLIKG
Trigger: TCCCTTAATGAGTTGCCCTCATGGATATTTTTGGAA...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTAGTGGTTATTATCACTaGAAAGTCTCTCCCCAAACA +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPSGYYH*KVSPQT
Trigger: TGTTTGGGGAGAGACTTTTCAGTGATAATAACCACT...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGATGAAAGTAGGCCTTaGCCTGAAACTGGCGAATTG +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTDESRP*PETGEL
Trigger: CAATTCGCCAGTTTCAGGTCAAGGCCTACTTTCATC...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp TATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTGGCAGAGAGTCTGCCTTTATTaGAAGAAAATGTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: YLLLSYPAYMLVCCTVWQRVCLY*KKMSSE
Trigger: CTCTGAGGACATTTTCTTTCAATAAAGGCAGACTCT...CTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTCTCTCCAAACCAAGGTaGTGGCATGGCTTCAATGAG +
Preference number: 4 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLLSKPR*WHGFNE
Trigger: CTCATTGAAGCCATGCCATCACCTTGGTTTGGAGAG...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCACAAAACTGTCATATTaGAAGGATCTAACGGGTACA +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTTKLSY*KDLTGT
Trigger: TGTACCCGTTAGATCCTTTCAATATGACAGTTTTGT...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp TATGTCATGGCCAAAATTGATCTTCAGTCCTCTTCCACCACGTTGGCATCCTTCTTTCAGGTCTCAGTTTaGTCCAGCTGGATTGAGGCC +
Preference number: 4 (lower is better)
Translates to: YVMAKIDLQSSSTTLASFFQVSV*SSWIEA
Trigger: GGCCTCAATCCAGCTGGATCAAACTGAGACCTGAAA...GAAGGATGCCAACGTGGTGGAAGAGGACTGAAGATCAATTTTGGCCATGACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR TCA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAAAGCAGGGGCTTCCACTaGACAATTCTGGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKSRGFH*TILGWA
Trigger: TGCCCAGCCCAGAATTGTTCAGTGGAAGCCCCTGCT...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR TCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTAGAGAGGTTCTTTTCTaGTACATGCACGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVREVLF*YMHEFW
Trigger: CCAGAACTCGTGCATGTATCAGAAAAGAACCTCTCT...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCGCTCATAGGAAAGAATaGGGTCTTCTTGTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPAHRKE*GLLVLG
Trigger: ACCGAGGACAAGAAGACCTCATTCTTTCCTATGAGC...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404783.7
CDS-3UTR TCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATAGCTCATAGGAAAGAATaGGGTCTTCTTGTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFIAHRKE*GLLVLG
Trigger: ACCGAGGACAAGAAGACCTCATTCTTTCCTATGAGC...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404783.7
ENST00000524982.5
CDS-3UTR TCA 90 bp GAAGAGCAGCCAGAACGGAAAGGAATACACTCATGCAAGGCTACCAGAAATGTGAGAGATACCAAGCATTaGAGAGCAGCCAGAACGGAA +
Preference number: 4 (lower is better)
Translates to: EEQPERKGIHSCKATRNVRDTKH*RAARTE
Trigger: TTCCGTTCTGGCTGCTCTTCAATGCTTGGTATCTCT...CACATTTCTGGTAGCCTTGCATGAGTGTATTCCTTTCCGTTCTGGCTGCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR TCA 90 bp CAGTTAAAGGAACAACAGCCTTTCACCTGGTGTGGTCAGTGGATTCGCATACAACCGCGATTTCCTAAATaGGAAAGTGCAGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: QLKEQQPFTWCGQWIRIQPRFPK*ESAAAW
Trigger: CCAAGCAGCTGCACTTTCTCATTTAGGAAATCGCGG...TTGTATGCGAATCCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR TCA 90 bp TCAGTTAAAGGAACAACAGCCTTTCACCTGGTGTGGTCAGTGGATTCGCATACATACTCAATGGGCACTTaGTGCAGGATGAGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: SVKGTTAFHLVWSVDSHTYSMGT*CRMSWR
Trigger: TCGCCAACTCATCCTGCATCAAGTGCCCATTGAGTA...TGTATGCGAATCCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR TCA 90 bp ATCCTTCAGTTAAAGGAACAACAGCCTTTCACCTGGTGTGGTCAGTGGATTCGCGATGTGACAGACCAGTaGTCTACTTCGCCATTTCAG +
Preference number: 4 (lower is better)
Translates to: ILQLKEQQPFTWCGQWIRDVTDQ*STSPFQ
Trigger: CTGAAATGGCGAAGTAGATCACTGGTCTGTCACATC...GCGAATCCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAACTGAAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR TCA 90 bp TATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTACACGGAGCTGGCTGCAGCTaGACTCTCAGGAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: YETDIRDSQQEGFRAQVHGAGCS*TLRRTQ
Trigger: CTGGGTTCTCCTGAGAGTTCAGCTGCAGCCAGCTCC...GTGTACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR TCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGATTGTCATGCGAGCTaGAGGGGGCTGAAATTATTC +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTDCHAS*RGLKLF
Trigger: GAATAATTTCAGCCCCCTTCAGCTCGCATGACAATC...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR GCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTAGCAGGACTGGCCTGTaGTGGGCTGAACCAACCATG +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSSRTGL*WAEPTM
Trigger: CATGGTTGGTTCAGCCCAGCACAGGCCAGTCCTGCT...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR GCA 90 bp GTAGCAATGCCTCAAATCCTTTTCATGGTAGGAGATAGCTCAGGGGTATCTCCTTCTGCCATCCTCTGCTaGAGCACCTCCTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: VAMPQILFMVGDSSGVSPSAILC*STSWYN
Trigger: ATTATACCAGGAGGTGCTGCAGCAGAGGATGGCAGA...AGGAGATACCCCTGAGCTATCTCCTACCATGAAAAGGATTTGAGGCATTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTCCTTCCATCTTTTTGTaGAGCTCCTCCATCTATAAT +
Preference number: 4 (lower is better)
Translates to: PITLMALSLALLPSLHAGPSIFL*SSSIYN
Trigger: ATTATAGATGGAGGAGCTGCACAAAAAGATGGAAGG...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTGGCAGCTAAAGTGCCATTGTTaGCAGAGAGTAGATGGTTTT +
Preference number: 4 (lower is better)
Translates to: YLLLSYPAYMLVCCTVWQLKCHC*QRVDGF
Trigger: AAAACCATCTACTCTCTGGCAACAATGGCACTTTAG...CTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCATAGTTTGTTCACAGTaGTGTAAACAGGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLIVCSQ*CKQVPE
Trigger: CTCCGGAACCTGTTTACAGCACTGTGAACAAACTAT...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTTGTGCAGGACTACCTTaGGAGGCTCTCCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEICAGLP*EALLPG
Trigger: CCCTGGAAGGAGAGCCTCGCAAGGTAGTCCTGCACA...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CAAATCCTTTTCATGGTAGGAGATAGCTCAGGGGTATCTCCTGCCCATGGTTTTCACCACGGAGGTCAATaGCATTCACCGATAGGATCT +
Preference number: 4 (lower is better)
Translates to: QILFMVGDSSGVSPAHGFHHGGQ*HSPIGS
Trigger: AGATCCTATCGGTGAATGGCATTGACCTCCGTGGTG...AAAACCATGGGCAGGAGATACCCCTGAGCTATCTCCTACCATGAAAAGGATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTAGTGCAGCAGCTGCCTaGTCGTGGGATGCACCACGG +
Preference number: 4 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVISAAAA*SWDAPR
Trigger: CCGTGGTGCATCCCACGAGCAGGCAGCTGCTGCACT...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCAAGCATTGAAGAGCAGCCAGAACGGAAAGGAATACACTCATGCAAGGCTACCCTGTGGTTCATCATCTaGTCTCGTAGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: PSIEEQPERKGIHSCKATLWFII*SRRSWI
Trigger: AATCCATGACCTACGAGAGCAGATGATGAACCACAG...GGTAGCCTTGCATGAGTGTATTCCTTTCCGTTCTGGCTGCTCTTCAATGCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR GCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCTGTGGTTCATCATCTaGTCTCGTAGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFLWFII*SRRSWI
Trigger: AATCCATGACCTACGAGAGCAGATGATGAACCACAG...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGCTGTGGTTCATCATCTaGTCTCGTAGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLLWFII*SRRSWI
Trigger: AATCCATGACCTACGAGAGCAGATGATGAACCACAG...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCCGGACCCGGAGCTCATaGTGTGGTTCATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFRTRSS*CGSSSA
Trigger: AGCAGATGATGAACCACAGCATGAGCTCCGGGTCCG...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCGGACCCGGAGCTCATaGTGTGGTTCATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFRTRSS*CGSSSA
Trigger: AGCAGATGATGAACCACAGCATGAGCTCCGGGTCCG...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATACCAAGCATTGAAGAGCAGCCAGAACGGAAAGGAATACACTCATGCAAGGCTATGACTCTCCTGGCTTaGCACCACTCATCATCAGAG +
Preference number: 4 (lower is better)
Translates to: IPSIEEQPERKGIHSCKAMTLLA*HHSSSE
Trigger: CTCTGATGATGAGTGGTGGCAAGCCAGGAGAGTCAT...AGCCTTGCATGAGTGTATTCCTTTCCGTTCTGGCTGCTCTTCAATGCTTGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR GCA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTCAAAGTGATAGTCTCTaGCATCCACCTCGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: PITDVGNGKADEVRVLAIQSDSL*HPPRSL
Trigger: GAGACTACGAGGTGGATGGCAGAGACTATCACTTTG...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACAAAGTGATAGTCTCTaGCATCCACCTCGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVQSDSL*HPPRSL
Trigger: GAGACTACGAGGTGGATGGCAGAGACTATCACTTTG...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACAAATCTCACAGACTaGACACTGGTTCCATATAAA +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPTNLTD*TLVPYK
Trigger: TTTATATGGAACCAGTGTGCAGTCTGTGAGATTTGT...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCACAAATCTCACAGACTaGACACTGGTTCCATATAAA +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSTNLTD*TLVPYK
Trigger: TTTATATGGAACCAGTGTGCAGTCTGTGAGATTTGT...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCACAAGTATACAGTGTTTaGCTCTTTCTGCTACAAATC +
Preference number: 4 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPQVYSV*LFLLQI
Trigger: GATTTGTAGCAGAAAGAGGCAAACACTGTATACTTG...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCAGTTATTCAACTATTTaGATGGCAGGCTCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSSYSTI*MAGSGY
Trigger: ATAACCTGAGCCTGCCATGCAAATAGTTGAATAACT...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAGTTATTCAACTATTTaGATGGCAGGCTCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPSYSTI*MAGSGY
Trigger: ATAACCTGAGCCTGCCATGCAAATAGTTGAATAACT...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCAGTCATCAGATTTGCTaGAAAATACACCAGTTCATT +
Preference number: 4 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSSHQIC*KIHQFI
Trigger: AATGAACTGGTGTATTTTGCAGCAAATCTGATGACT...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGGGCTCCGAGTGCATTTaGACCAGATGTAATCTGGGT +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGGSECI*TRCNLG
Trigger: ACCCAGATTACATCTGGTGCAAATGCACTCGGAGCC...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCGCCCCAGGCTCCGAGTaGATTTGCACCAGATGTAAT +
Preference number: 4 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTAPGSE*ICTRCN
Trigger: ATTACATCTGGTGCAAATGCACTCGGAGCCTGGGGC...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAACTGAGACCCCCGTGGTaGTACACATTGTACCAGAGC +
Preference number: 4 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKLRPPW*YTLYQS
Trigger: GCTCTGGTACAATGTGTAGCACCACGGGGGTCTCAG...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GAGTGCATTTGCACCAGATGTAATCTGGGTAACTTTCATGCCATTTCCATACAAATGTCCTCAGAGCCATaGGGTAGTGCTGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: ECICTRCNLGNFHAISIQMSSEP*GSAGSG
Trigger: CCCACTCCCAGCACTACCGCATGGCTCTGAGGACAT...TTGTATGGAAATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCGAGGAGGAAGAGGTTTaGTATCAGAATAATTGGGGC +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFEEEEV*YQNNWG
Trigger: GCCCCAATTATTCTGATAGCAAACCTCTTCCTCCTC...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCATTGGGAGTCAACCTTaGCACTTGGTTGTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPIGSQP*HLVVCP
Trigger: AGGACAGACAACCAAGTGGCAAGGTTGACTCCCAAT...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCGAGAGAAGAAAAGTCTaGCATCCCATTGGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: PSFILQCLFCPTLWPLCFERRKV*HPIGSQ
Trigger: TTGACTCCCAATGGGATGGCAGACTTTTCTTCTCTC...GAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTGAGAGAAGAAAAGTCTaGCATCCCATTGGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLERRKV*HPIGSQ
Trigger: TTGACTCCCAATGGGATGGCAGACTTTTCTTCTCTC...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCACGGGTACAGCCTGGTaGACTCAGAAGTTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGTGTAW*TQKLRN
Trigger: GTTTCTTAACTTCTGAGTGCACCAGGCTGTACCCGT...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTACGGGTACAGCCTGGTaGACTCAGAAGTTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSTGTAW*TQKLRN
Trigger: GTTTCTTAACTTCTGAGTGCACCAGGCTGTACCCGT...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCACGTTAGTCCGGAGTaGACAGTAACATGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLHVSPE*TVTCKE
Trigger: TTCTTTGCATGTTACTGTGCACTCCGGACTAACGTG...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398309.6
ENST00000524982.5
CDS-3UTR GCA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCCCAGGTTCTCCTGTCTaGTGTCCGGTTCACACTTGC +
Preference number: 4 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFPGSPV*CPVHTC
Trigger: GCAAGTGTGAACCGGACAGCAGACAGGAGAACCTGG...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426717.6
CDS-3UTR GCA 90 bp GGCTACCAGAAATGTGAGCGAAAGGCAAGTAAAAGCCGCAGAGGAGGCTGCATTTTTACAGGAACCCGCTaGTTGATTGCTGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GYQKCERKASKSRRGGCIFTGTR*LIAVSS
Trigger: AGAAGAAACAGCAATCAAGCAGCGGGTTCCTGTAAA...AATGCAGCCTCCTCTGCGGCTTTTACTTGCCTTTCGCTCACATTTCTGGTAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR GCA 90 bp CTACCTAATGAGGGAAACACCAAACTACTCTGGTATGATCACAGAGGCATCCAAAGCACTGAAATGTCCTaGACCCTCCACGCGATGAAG +
Preference number: 4 (lower is better)
Translates to: LPNEGNTKLLWYDHRGIQSTEMS*TLHAMK
Trigger: CTTCATCGCGTGGAGGGTGCAGGACATTTCAGTGCT...TTGGATGCCTCTGTGATCATACCAGAGTAGTTTGGTGTTTCCCTCATTAGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR GCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTTGGTGCAAGCAACTTTaGAGTGGCAAATCATTGGTG +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFWCKQL*SGKSLV
Trigger: CACCAATGATTTGCCACTGCAAAGTTGCTTGCACCA...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR CCA 90 bp GAGGTAACAAAGCCACGGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTTGGTGCTCGTCTTGTaGGGGCTTTTCCGCACACTG +
Preference number: 4 (lower is better)
Translates to: EVTKPRFTFFGHEPSIFHLVLVL*GLFRTL
Trigger: CAGTGTGCGGAAAAGCCCCCACAAGACGAGCACCAA...GTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACCGTGGCTTTGTTACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTTCCACCGCTTTACTGTaGGAAACCTCTGACACATCA +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTSTALL*ETSDTS
Trigger: TGATGTGTCAGAGGTTTCCCACAGTAAAGCGGTGGA...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTCCACCGCTTTACTGTaGGAAACCTCTGACACATCA +
Preference number: 4 (lower is better)
Translates to: PITDVGNGKADEVRVLAISTALL*ETSDTS
Trigger: TGATGTGTCAGAGGTTTCCCACAGTAAAGCGGTGGA...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCGTGAGTAATATCAGGTaGACCATAAGGATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAVSNIR*TIRISH
Trigger: ATGACTGATCCTTATGGTCCACCTGATATTACTCAC...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCTTGCCAGAGAGTAGATaGTTTTCCATTGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFLPESR*FSIGGE
Trigger: TTCTCCACCAATGGAAAACCATCTACTCTCTGGCAA...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTTCACCGATAGGATCTaGTCTCCTCTCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFFTDRI*SPLWSS
Trigger: GGAGCTCCAGAGAGGAGACCAGATCCTATCGGTGAA...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACAGCAGCTGCCTGCTCGTaGGATGCACCACGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTAAACS*DAPRRS
Trigger: TGACCTCCGTGGTGCATCCCACGAGCAGGCAGCTGC...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp TATATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTACGCAGCTGCCTGCTCGTaGGATGCACCACGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: YMKQILGILNRKVLGHKYAAACS*DAPRRS
Trigger: TGACCTCCGTGGTGCATCCCACGAGCAGGCAGCTGC...GTACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp GGCTACCAGAAATGTGAGCGAAAGGCAAGTAAAAGCCGCAGAGGAGGCTGCATTGTAGGTCATGGATTTTaGCCTCAAATCGAGCGTAAT +
Preference number: 4 (lower is better)
Translates to: GYQKCERKASKSRRGGCIVGHGF*PQIERN
Trigger: ATTACGCTCGATTTGAGGCCAAAATCCATGACCTAC...AATGCAGCCTCCTCTGCGGCTTTTACTTGCCTTTCGCTCACATTTCTGGTAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR CCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCGTAGGTCATGGATTTTaGCCTCAAATCGAGCGTAAT +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFVGHGF*PQIERN
Trigger: ATTACGCTCGATTTGAGGCCAAAATCCATGACCTAC...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGGTAGGTCATGGATTTTaGCCTCAAATCGAGCGTAAT +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKVGHGF*PQIERN
Trigger: ATTACGCTCGATTTGAGGCCAAAATCCATGACCTAC...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTGCTCTCGTAGGTCATaGATTTTGGCCTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLCSRRS*ILASNR
Trigger: TCGATTTGAGGCCAAAATCCATGACCTACGAGAGCA...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTTGCTCTCGTAGGTCATaGATTTTGGCCTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVCSRRS*ILASNR
Trigger: TCGATTTGAGGCCAAAATCCATGACCTACGAGAGCA...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCTGCTCTCGTAGGTCATaGATTTTGGCCTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFCSRRS*ILASNR
Trigger: TCGATTTGAGGCCAAAATCCATGACCTACGAGAGCA...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCCTCGTAGTCTCGCTTTaGCCTCGTAGTATGAGGCAC +
Preference number: 4 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTLVVSL*PRSMRH
Trigger: GTGCCTCATACTACGAGGCCAAAGCGAGACTACGAG...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTAAATTGTCATTGTACTaGCCGGCTTCTATAAACTTG +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPKLSLY*PASINL
Trigger: CAAGTTTATAGAAGCCGGCCAGTACAATGACAATTT...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTAAATTGTCATTGTACTaGCCGGCTTCTATAAACTTG +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSKLSLY*PASINL
Trigger: CAAGTTTATAGAAGCCGGCCAGTACAATGACAATTT...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAATTGTCATTGTACTaGCCGGCTTCTATAAACTTG +
Preference number: 4 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPKLSLY*PASINL
Trigger: CAAGTTTATAGAAGCCGGCCAGTACAATGACAATTT...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTCACAGACTGCACACTaGTTCCATATAAATTGTCAT +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTSQTAH*FHINCH
Trigger: ATGACAATTTATATGGAACCAGTGTGCAGTCTGTGA...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTTTGGATCATAGGTTTTCTTaGCTTGTTCCTCTGTTAGAC +
Preference number: 4 (lower is better)
Translates to: SWSWGRTPPSFFSRVTALDHRFS*LVPLLD
Trigger: GTCTAACAGAGGAACAAGCCAAGAAAACCTATGATC...CAAAGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp CCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCGTTCATCCCTACACCTaGCACTTTGAGCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: PSFILQCLFCPTLWPLCFVHPYT*HFEQTK
Trigger: TTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAAC...GAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACGTTCATCCCTACACCTaGCACTTTGAGCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYVHPYT*HFEQTK
Trigger: TTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAAC...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCCAGCTAAATCAGCTCTaGACATCTGCTGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFQLNQL*TSAGVR
Trigger: CCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTG...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCATCCACTCTAAAGTaGGAAACCAACTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKPSTLK*ETNSSS
Trigger: ACTAGAAGAGTTGGTTTCCCACTTTAGAGTGGATGG...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTTCTCCCCAAACACCATaGGCAAAAGCAATGCTGATG +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTSPQTP*AKAMLM
Trigger: CATCAGCATTGCTTTTGCCCATGGTGTTTGGGGAGA...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCAGCTGGGATCAGGAATaGCATTCTGGTGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGSWDQE*HSGVRK
Trigger: TTTTCTGACACCAGAATGCCATTCCTGATCCCAGCT...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTAGGTGTAAATTCTATTaGAAAAGACCCTCTCACCAA +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPRCKFY*KRPSHQ
Trigger: TTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCT...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCAGGTGTAAATTCTATTaGAAAAGACCCTCTCACCAA +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTRCKFY*KRPSHQ
Trigger: TTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCT...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCAGACAACACAACAAATaGAGGTGTAAATTCTATTGG +
Preference number: 4 (lower is better)
Translates to: ERALDKVCSVSTSLAPGSRQHNK*RCKFYW
Trigger: CCAATAGAATTTACACCTCCATTTGTTGTGTTGTCT...GGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATGCACCAGATGTAATCTaGGTAACTTTCATGCCATTT +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHAPDVI*VTFMPF
Trigger: AAATGGCATGAAAGTTACCCAGATTACATCTGGTGC...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GTTTGCTATCAGAATAATTGGGGCCAGAGTCTGCCTTTATTGAAAGAAAATGTCGTGTTAGCACCAGTCTaGCCCCAGGCTCCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: VCYQNNWGQSLPLLKENVVLAPV*PQAPSA
Trigger: TGCACTCGGAGCCTGGGGCCAGACTGGTGCTAACAC...GACATTTTCTTTCAATAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCGGTTGGAGAGAGCTCTaGACAAAGTTTGCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: PSFILQCLFCPTLWPLCFGWREL*TKFAVL
Trigger: TAACACTGCAAACTTTGTCCAGAGCTCTCTCCAACC...GAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTGGAGAGTTCTTTCCTaGCTCGGAGTCCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFWRVLS*LGVLKG
Trigger: GCCCTTCAGGACTCCGAGCCAGGAAAGAACTCTCCA...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTAGTCAACCTTGCCACTTaGTTGTCTGTCCTCATGAGT +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVVNLAT*LSVLMS
Trigger: ACTCATGAGGACAGACAACCAAGTGGCAAGGTTGAC...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGAGTCTGCCATCCCATTaGGAGTCAACCTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGSLPSH*ESTLPL
Trigger: AAGTGGCAAGGTTGACTCCCAATGGGATGGCAGACT...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp TCAGTTAAAGGAACAACAGCCTTTCACCTGGTGTGGTCAGTGGATTCGCATACACTTGACTGGCATTCTTaGGTCTTTCCACTGCCACAG +
Preference number: 4 (lower is better)
Translates to: SVKGTTAFHLVWSVDSHTLDWHS*VFPLPQ
Trigger: CTGTGGCAGTGGAAAGACCCAAGAATGCCAGTCAAG...TGTATGCGAATCCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR CCA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCTCCACTGAACAATTCTaGGCTGGGCATCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTSTEQF*AGHLPW
Trigger: CCAAGGCAGATGCCCAGCCCAGAATTGTTCAGTGGA...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR CCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCGATACTTAGTACAGTaGTGGACAGGCATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPRYLVQ*WTGIQA
Trigger: TGCTTGGATGCCTGTCCACCACTGTACTAAGTATCG...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR CCA 90 bp CCAAGCATTGAAGAGCAGCCAGAACGGAAAGGAATACACTCATGCAAGGCTACCCGAGCACAAAATTATTaGAACAAAGCAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSIEEQPERKGIHSCKATRAQNY*NKAGRR
Trigger: CCTCCTCCCTGCTTTGTTCCAATAATTTTGTGCTCG...GGTAGCCTTGCATGAGTGTATTCCTTTCCGTTCTGGCTGCTCTTCAATGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR CCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCGAGCACAAAATTATTaGAACAAAGCAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFRAQNY*NKAGRR
Trigger: CCTCCTCCCTGCTTTGTTCCAATAATTTTGTGCTCG...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404783.7
ENST00000426717.6
CDS-3UTR TCA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAATGGCCTGTGCTGGGCTaGACCAACCATGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKWPVLG*TNHVGR
Trigger: CCTGCCCACATGGTTGGTTCAGCCCAGCACAGGCCA...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR TCA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCCGTTGGAGAGTCATTaGAGGCTGACGAGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEIPLESH*RLTSCG
Trigger: ACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGG...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATAGTCCACCAGCCAGAATaGAGGACACAAAAATACCTT +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFIVHQPE*RTQKYL
Trigger: AAGGTATTTTTGTGTCCTTCATTCTGGCTGGTGGAC...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ATACCAAGCATTGAAGAGCAGCCAGAACGGAAAGGAATACACTCATGCAAGGCTTTAAAACTAAGTCCTTaGCTTGGCAGCCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: IPSIEEQPERKGIHSCKALKLSP*LGSPLS
Trigger: GGACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAA...AGCCTTGCATGAGTGTATTCCTTTCCGTTCTGGCTGCTCTTCAATGCTTGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR TCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCGCTCATAGGAAAGAATaGGGTCTTCTTGTCCTCGTT +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPAHRKE*GLLVLV
Trigger: AACGAGGACAAGAAGACCTCATTCTTTCCTATGAGC...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TACACCAGGCCCAGAACCCTCTCTGTGCCAAATGTCAGACAATTTATCCCCTTTGCTCATAGGAAAGAATaGGGTCTTCTTGTCCTCGTT +
Preference number: 4 (lower is better)
Translates to: YTRPRTLSVPNVRQFIPFAHRKE*GLLVLV
Trigger: AACGAGGACAAGAAGACCTCATTCTTTCCTATGAGC...AAAGGGGATAAATTGTCTGACATTTGGCACAGAGAGGGTTCTGGGCCTGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR TCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTGGACATCTGCTGGGGTaGGGAGGCTCTCATCTCATC +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILGHLLG*GGSHLI
Trigger: GATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCC...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTAAGGGATGTGCTGCATaGGAGTGTATCACTAATGTG +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSKGCAA*ECITNV
Trigger: CACATTAGTGATACACTCTCATGCAGCACATCCCTT...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTGTTGGTGGTTCAATTTaGTTGTACTTAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFVGGSI*LYLATA
Trigger: TGCTGTGGCTAAGTACAATCAAATTGAACCACCAAC...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTGATCTGGCACTTTTCTaGAAGGGCCCAGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFDLALF*KGPACV
Trigger: CACACATGCTGGGCCCTTTCAGAAAAGTGCCAGATC...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTTTACTTTCTGGGCTaGGTAGGTGAAACGGCGACC +
Preference number: 4 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFLYFLG*VGETAT
Trigger: GGTCGCCGTTTCACCTACTCAGCCCAGAAAGTAAAG...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCAAGCACAGGTTTCAGTaGGGAAGGATATTTACAGAC +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGKHRFQ*GRIFTD
Trigger: GTCTGTAAATATCCTTCCTCACTGAAACCTGTGCTT...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCAAGCACAGGTTTCAGTaGGGAAGGATATTTACAGAC +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFKHRFQ*GRIFTD
Trigger: GTCTGTAAATATCCTTCCTCACTGAAACCTGTGCTT...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp TATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTGGCAGACAAAACTGTCATATTaGAAGGATCTAACGGGTACA +
Preference number: 4 (lower is better)
Translates to: YLLLSYPAYMLVCCTVWQTKLSY*KDLTGT
Trigger: TGTACCCGTTAGATCCTTTCAATATGACAGTTTTGT...CTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTTTGATCCAGCTGGATTaGGGCCAAGAGCCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFLIQLD*GQEPGN
Trigger: GTTACCTGGCTCTTGGCCTCAATCCAGCTGGATCAA...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR TCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGGCAATCTGTAAGCTCTaGAGATTTTTGAAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKAICKL*RFLKSV
Trigger: GACAGACTTCAAAAATCTTCAGAGCTTACAGATTGC...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR TCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTAGGAGCGTCCTCATCTTaGTATCGATACTTAGTACAG +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVGASSS*YRYLVQ
Trigger: CTGTACTAAGTATCGATATCAAGATGAGGACGCTCC...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR TCA 90 bp CTACCTAATGAGGGAAACACCAAACTACTCTGGTATGATCACAGAGGCATCCAAGCACTTGATGCAGGATaGGTTGGCGAAGCAGATTTC +
Preference number: 4 (lower is better)
Translates to: LPNEGNTKLLWYDHRGIQALDAG*VGEADF
Trigger: GAAATCTGCTTCGCCAACTCATCCTGCATCAAGTGC...TTGGATGCCTCTGTGATCATACCAGAGTAGTTTGGTGTTTCCCTCATTAGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR TCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTCAGTATCTGTCTTCTTaGCTGGCATTCTTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTQYLSS*LAFLGL
Trigger: AAGACCCAAGAATGCCAGTCAAGAAGACAGATACTG...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650630.1
CDS-3UTR TCA 90 bp GTTAAAGGAACAACAGCCTTTCACCTGGTGTGGTCAGTGGATTCGCATACAAGGCAAACTACTCTGGTATaGTCACAGAGGCATCCAACT +
Preference number: 4 (lower is better)
Translates to: VKGTTAFHLVWSVDSHTRQTTLV*SQRHPT
Trigger: AGTTGGATGCCTCTGTGATCATACCAGAGTAGTTTG...CCTTGTATGCGAATCCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR GCA 90 bp GAGGTAACAAAGCCACGGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACCGGCTGCAGCTGTGTTaGTTGGTGAGGTATGCATTC +
Preference number: 4 (lower is better)
Translates to: EVTKPRFTFFGHEPSIFHRLQLC*LVRYAF
Trigger: GAATGCATACCTCACCAAGCAACACAGCTGCAGCCG...GTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACCGTGGCTTTGTTACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp AAAGTATCTGTGTTGACAATTATAGGAGCAGGACTGGCCGTGATCCAACTAAAAGAGTCTGCCATCCTCTaGTGCAGCACCTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: KVSVLTIIGAGLAVIQLKESAIL*CSTSWY
Trigger: ATACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTC...TTTTAGTTGGATCACGGCCAGTCCTGCTCCTATAATTGTCAACACAGATACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529401.5
CDS-3UTR GCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCATCTTTTTGTaGAGCTCCTCCATCTATAAT +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKPSIFL*SSSIYN
Trigger: ATTATAGATGGAGGAGCTGCACAAAAAGATGGAAGG...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCCCTTCCATCTTTTTGTaGAGCTCCTCCATCTATAAT +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFPSIFL*SSSIYN
Trigger: ATTATAGATGGAGGAGCTGCACAAAAAGATGGAAGG...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCTAAAGTGCCATTGTTaGCAGAGAGTAGATGGTTTT +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKLKCHC*QRVDGF
Trigger: AAAACCATCTACTCTCTGGCAACAATGGCACTTTAG...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATAGTTTGTTCACAGTaGTGTAAACAGGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFIVCSQ*CKQVPE
Trigger: CTCCGGAACCTGTTTACAGCACTGTGAACAAACTAT...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCGCTGACGAGTTGCGGTaGTATGTTGGGAATGACTGG +
Preference number: 4 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFADELR*YVGNDW
Trigger: CCAGTCATTCCCAACATAGCACCGCAACTCGTCAGC...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TCCTTGTATATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACTGTGCAGGACTACCTTaGGAGGCTCTCCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLYMKQILGILNRKVLGHCAGLP*EALLPG
Trigger: CCCTGGAAGGAGAGCCTCGCAAGGTAGTCCTGCACA...GTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATATACAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTCCAGTGGAGCCTTTGTaGAGGACTACCTTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILPVEPL*RTTLRG
Trigger: GCCTCGCAAGGTAGTCCTGCACAAAGGCTCCACTGG...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTTGCCTGCTCGTGGGATaGACCACGGAGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVICLLVG*TTEVNA
Trigger: GGCATTGACCTCCGTGGTGCATCCCACGAGCAGGCA...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAAAGTGCAGCAGCTGCCTaGTCGTGGGATGCACCACGG +
Preference number: 4 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKSAAAA*SWDAPR
Trigger: CCGTGGTGCATCCCACGAGCAGGCAGCTGCTGCACT...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTAGTGCAGCAGCTGCCTaGTCGTGGGATGCACCACGG +
Preference number: 4 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQASAAAA*SWDAPR
Trigger: CCGTGGTGCATCCCACGAGCAGGCAGCTGCTGCACT...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAGTGCAGCAGCTGCCTaGTCGTGGGATGCACCACGG +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKSAAAA*SWDAPR
Trigger: CCGTGGTGCATCCCACGAGCAGGCAGCTGCTGCACT...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCAGGTTGATATTGTaGTATAATCGTCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAFRLIL*YNRHCL
Trigger: CAGACAGTGACGATTATAGCACAATATCAACCTGAA...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTCAGGTTGATATTGTaGTATAATCGTCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: PITLMALSLALLPSLHAGFRLIL*YNRHCL
Trigger: CAGACAGTGACGATTATAGCACAATATCAACCTGAA...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTACACCAGGCCCAGAACCCTCTTCAGGTTGATATTGTaGTATAATCGTCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: GILNRKVLGHKYTRPRTLFRLIL*YNRHCL
Trigger: CAGACAGTGACGATTATAGCACAATATCAACCTGAA...GAGGGTTCTGGGCCTGGTGTACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTGTGGTTCATCATCTaGTCTCGTAGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPLWFII*SRRSWI
Trigger: AATCCATGACCTACGAGAGCAGATGATGAACCACAG...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCCTGTGGTTCATCATCTaGTCTCGTAGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGLWFII*SRRSWI
Trigger: AATCCATGACCTACGAGAGCAGATGATGAACCACAG...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCGTGTTTGCCTCTTTCTaGTACAAATCTCACAGACTG +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFVFASF*YKSHRL
Trigger: CAGTCTGTGAGATTTGTAGCAGAAAGAGGCAAACAC...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGGTGTTTGCCTCTTTCTaGTACAAATCTCACAGACTG +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLVFASF*YKSHRL
Trigger: CAGTCTGTGAGATTTGTAGCAGAAAGAGGCAAACAC...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTTTGGACACTCAAGTATACAGTGTTTaGCTCTTTCTGCTACAAATC +
Preference number: 4 (lower is better)
Translates to: SWGRTPPSFFSRVTALDTQVYSV*LFLLQI
Trigger: GATTTGTAGCAGAAAGAGGCAAACACTGTATACTTG...AGTGTCCAAAGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCATGAAAGGCCCAGATTaGTCTTCAATAACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLMKGPD*SSITSL
Trigger: CAAGCTTGTTATTGAAGAGCAATCTGGGCCTTTCAT...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCATTTTGTTCTTCTAAATaGTCTTCTGTCGTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPFCSSK*SSVVVR
Trigger: TCTGACAACGACAGAAGAGCATTTAGAAGAACAAAA...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTGGCTTAGTCTGGGCATaGACAGAACCCAGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPGLVWA*TEPRVE
Trigger: CTCTACTCTGGGTTCTGTGCATGCCCAGACTAAGCC...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTGTGTGGCAGAATCCCTaGCAGGTCTGGATGTACCCC +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILVWQNP*QVWMYP
Trigger: GGGGTACATCCAGACCTGGCAGGGATTCTGCCACAC...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCACCCTCTCACCAATTTaGTTGGTGATTCTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: PSFILQCLFCPTLWPLCFTLSPI*LVILQA
Trigger: TGCTTGAAGAATCACCAAGCAAATTGGTGAGAGGGT...GAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATAATGTCCTCAGAGCCATaGGGTAGTGCTGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFIMSSEP*GSAGSG
Trigger: CCCACTCCCAGCACTACCGCATGGCTCTGAGGACAT...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACAGGAGGTACTCCACATaGTTCAAGGGAATTGATCTT +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYRRYST*FKGIDL
Trigger: AAGATCAATTCCCTTGAAGCATGTGGAGTACCTCCT...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCGCTGTTACAAGAAACTaGACAGCTGTACAAGAAATG +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLAVTRN*TAVQEM
Trigger: CATTTCTTGTACAGCTGTGCAGTTTCTTGTAACAGC...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAGGAATAAATGCATGTTaGATAGCTTGTTCACATTGT +
Preference number: 4 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPGINAC*IACSHC
Trigger: ACAATGTGAACAAGCTATGCAACATGCATTTATTCC...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330014.11
ENST00000418306.6
CDS-3UTR GCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTTTCTTTTCTGATACATaGACGAGTTCTGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFFFSDT*TSSGPL
Trigger: AAGAGGCCCAGAACTCGTGCATGTATCAGAAAAGAA...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTCACGTTAGTCCGGAGTaGACAGTAACATGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: PITDVGNGKADEVRVLAIHVSPE*TVTCKE
Trigger: TTCTTTGCATGTTACTGTGCACTCCGGACTAACGTG...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398309.6
CDS-3UTR GCA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTGAAACACTTGGCCGTTaGATAGCGAAAGCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLETLGR*IAKAGN
Trigger: GTTACCAGCTTTCGCTATGCAACGGCCAAGTGTTTC...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418306.6
CDS-3UTR GCA 90 bp AGGAGAACCCAGGGTTTTACATCAAAATGGGTGAAGCAGAGGGATACTCCTTGTGAAACACTTGGCCGTTaGATAGCGAAAGCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: RRTQGFTSKWVKQRDTPCETLGR*IAKAGN
Trigger: GTTACCAGCTTTCGCTATGCAACGGCCAAGTGTTTC...ACAAGGAGTATCCCTCTGCTTCACCCATTTTGATGTAAAACCCTGGGTTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCTGCTGCAGCACCTCCTaGTATAATCTTCGTAATAAA +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFCCSTS*YNLRNK
Trigger: TTTATTACGAAGATTATACCAGGAGGTGCTGCAGCA...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GACCCTGAGTCTGCCATCCTCTGCTGCAGCACCTCCTGGTATAATCTTCGTAATTGCTGCAGCACCTCCTaGTATAATCTTCGTAATAAA +
Preference number: 4 (lower is better)
Translates to: DPESAILCCSTSWYNLRNCCSTS*YNLRNK
Trigger: TTTATTACGAAGATTATACCAGGAGGTGCTGCAGCA...ATTACGAAGATTATACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTCAGGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529401.5
CDS-3UTR CCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGTCCACCGCTTTACTGTaGGAAACCTCTGACACATCA +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGSTALL*ETSDTS
Trigger: TGATGTGTCAGAGGTTTCCCACAGTAAAGCGGTGGA...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCGTGAGTAATATCAGGTaGACCATAAGGATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFVSNIR*TIRISH
Trigger: ATGACTGATCCTTATGGTCCACCTGATATTACTCAC...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACTTGCCAGAGAGTAGATaGTTTTCCATTGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYLPESR*FSIGGE
Trigger: TTCTCCACCAATGGAAAACCATCTACTCTCTGGCAA...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAACAGGTTCCGGAGGCCTaGTGTAGTCGTCGTCAACAA +
Preference number: 4 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKQVPEA*CSRRQQ
Trigger: TTGTTGACGACGACTACACCAGGCCTCCGGAACCTG...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGTATGTTGGGAATGACTaGTCATCTCAGAGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKYVGND*SSQSQV
Trigger: TACCTGACTCTGAGATGACCAGTCATTCCCAACATA...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAGGTAACAAAGCCACGGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACATCTGGTCTCCTCTCTaGAGCTCCCCACTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: EVTKPRFTFFGHEPSIFHIWSPL*SSPLRS
Trigger: AGACCTAAGTGGGGAGCTCCAGAGAGGAGACCAGAT...GTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACCGTGGCTTTGTTACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp GAGGTAACAAAGCCACGGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTTCACCGATAGGATCTaGTCTCCTCTCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: EVTKPRFTFFGHEPSIFHFTDRI*SPLWSS
Trigger: GGAGCTCCAGAGAGGAGACCAGATCCTATCGGTGAA...GTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACCGTGGCTTTGTTACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACGCAGCTGCCTGCTCGTaGGATGCACCACGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNAAACS*DAPRRS
Trigger: TGACCTCCGTGGTGCATCCCACGAGCAGGCAGCTGC...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCGTAGGTCATGGATTTTaGCCTCAAATCGAGCGTAAT +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGVGHGF*PQIERN
Trigger: ATTACGCTCGATTTGAGGCCAAAATCCATGACCTAC...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TCCTTGTATATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACGGGAGCGTTTCTGATTaGTTCGCAGGGATCCGGACC +
Preference number: 4 (lower is better)
Translates to: SLYMKQILGILNRKVLGHGSVSD*FAGIRT
Trigger: GGTCCGGATCCCTGCGAACCAATCAGAAACGCTCCC...GTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATATACAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp GCACAGCAAATTAAAGAGATACCAAGCATTGAAGAGCAGCCAGAACGGAAAGGAACTAAGTCCTTGACTTaGCAGCCCACTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: AQQIKEIPSIEEQPERKGTKSLT*QPTVLA
Trigger: AGCAAGGACAGTGGGCTGCCAAGTCAAGGACTTAGT...TCCTTTCCGTTCTGGCTGCTCTTCAATGCTTGGTATCTCTTTAATTTGCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR CCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCACTAAGTCCTTGACTTaGCAGCCCACTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFTKSLT*QPTVLA
Trigger: AGCAAGGACAGTGGGCTGCCAAGTCAAGGACTTAGT...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATAAATTGTCATTGTACTaGCCGGCTTCTATAAACTTG +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHKLSLY*PASINL
Trigger: CAAGTTTATAGAAGCCGGCCAGTACAATGACAATTT...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATTCACAGACTGCACACTaGTTCCATATAAATTGTCAT +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHSQTAH*FHINCH
Trigger: ATGACAATTTATATGGAACCAGTGTGCAGTCTGTGA...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGTTCATCCCTACACCTaGCACTTTGAGCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTVHPYT*HFEQTK
Trigger: TTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAAC...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTGTTCATCCCTACACCTaGCACTTTGAGCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: PITDVGNGKADEVRVLAIVHPYT*HFEQTK
Trigger: TTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAAC...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCTCTCATCTCATCTCTTaGGCAGAAAGCCCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTSHLIS*AESPSE
Trigger: CTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGA...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTCTCATCTCATCTCTTaGGCAGAAAGCCCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFSHLIS*AESPSE
Trigger: CTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGA...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCCAGCTAAATCAGCTCTaGACATCTGCTGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFQLNQL*TSAGVR
Trigger: CCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTG...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCATGAGGTTCGAGTGCTaGCAATTTTTCTTTAAAGCA +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAMRFEC*QFFFKA
Trigger: TGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCAT...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACCCATCCACTCTAAAGTaGGAAACCAACTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYPSTLK*ETNSSS
Trigger: ACTAGAAGAGTTGGTTTCCCACTTTAGAGTGGATGG...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCCCATCCACTCTAAAGTaGGAAACCAACTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFPSTLK*ETNSSS
Trigger: ACTAGAAGAGTTGGTTTCCCACTTTAGAGTGGATGG...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTGGCAGGAACCCAGAGTAGAGTaGTTATTATCACTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: YLLLSYPAYMLVCCTVWQEPRVE*LLSLKS
Trigger: ACTTTTCAGTGATAATAACCACTCTACTCTGGGTTC...CTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTACCCAGCCTACATGCTaGTTTGCTGCACAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEITQPTC*FAAQCG
Trigger: GCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGT...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTAAGAAGTTATCGTGGTaGCCTAAAAATAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFKKLSW*PKNRAG
Trigger: CCCAGCTCTATTTTTAGGCCACCACGATAACTTCTT...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTAGCAACACTAGTAAATaGAAAGCACATCACACGACC +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVSNTSK*KAHHTT
Trigger: GGTCGTGTGATGTGCTTTCCATTTACTAGTGTTGCT...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTACAAAACCAAGGGTTaGTGGTTCAATTTGATTGTA +
Preference number: 4 (lower is better)
Translates to: GSHLISWAESPSEVHPYTYKTKG*WFNLIV
Trigger: TACAATCAAATTGAACCACCAACCCTTGGTTTTGTA...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGTGCTATCAGAATAATTaGGGCCAGAGTCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKCYQNN*GQSLPL
Trigger: TAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCA...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTATATCTAGCAAAGCTTaGAATAAGCTGCTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSISSKA*NKLLLK
Trigger: CTTTAAGAGCAGCTTATTCCAAGCTTTGCTAGATAT...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR CCA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCATCTGTAAAACTTGATTaGCTTCTTCTATCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPSVKLD*LLLSSA
Trigger: AGCAGAAGATAGAAGAAGCCAATCAAGTTTTACAGA...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR CCA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTTCTGTAAAACTTGATTaGCTTCTTCTATCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: EEALISSLGQKARQRFIPSVKLD*LLLSSA
Trigger: AGCAGAAGATAGAAGAAGCCAATCAAGTTTTACAGA...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR CCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCAGCATTCTCGCTCACTaGGTACATATATTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLSILAH*VHIFPC
Trigger: ACAAGGAAATATATGTACCCAGTGAGCGAGAATGCT...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404783.7
CDS-3UTR CCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTTATGTTGGGAATGACTaGTGTAGTCGTCGTCAACAA +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVYVGND*CSRRQQ
Trigger: TTGTTGACGACGACTACACCAGTCATTCCCAACATA...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418306.6
CDS-3UTR CCA 90 bp TCAGTTAAAGGAACAACAGCCTTTCACCTGGTGTGGTCAGTGGATTCGCATACAACCTGGTGTGGTCAGTaGATTCGCATACAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: SVKGTTAFHLVWSVDSHTTWCGQ*IRIQGL
Trigger: CAAACCTTGTATGCGAATCCACTGACCACACCAGGT...TGTATGCGAATCCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR CCA 90 bp GGACTGAACATCAAACTCCAGCCATTGGATTGTAGGGCTTTTAAGCTACCTAATCAACAGCCTTTCACCTaGTGTGGTCAGTGGATTCGC +
Preference number: 4 (lower is better)
Translates to: GLNIKLQPLDCRAFKLPNQQPFT*CGQWIR
Trigger: GCGAATCCACTGACCACACCAGGTGAAAGGCTGTTG...ATTAGGTAGCTTAAAAGCCCTACAATCCAATGGCTGGAGTTTGATGTTCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472545.6
3UTR CAA 72 bp AACTCAAAAAGGAGAGAAGAAAAGTCTGCCATCCCATaGGGAGTCAACCTTGCCACTTGGTTGTCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: NSKRREEKSAIP*GVNLATWLSVL
Trigger: GAGGACAGACAACCAAGTGGCAAGGTTGACTCCCAATGGGATGGCAGACTTTTCTTCTCTCCTTTTTGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCCAATTTCTGTCCCATTaGCATAAGGAATTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGQFLSH*HKELCP
Trigger: TGGACACAATTCCTTATGTCAATGGGACAGAAATTG...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGCAATTTCTGTCCCATTaGCATAAGGAATTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLQFLSH*HKELCP
Trigger: TGGACACAATTCCTTATGTCAATGGGACAGAAATTG...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTAGAGTCATTGAAGGCTaGCGAGTTGCGGTGCTATGT +
Preference number: 4 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPRVIEG*RVAVLC
Trigger: ACATAGCACCGCAACTCGTCAGCCTTCAATGACTCT...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR TCA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCTTAAAACTAAGTCCTTaGCTTGGCAGCCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTLKLSP*LGSPLS
Trigger: GGACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAA...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCATATCAAGTCGTCATTaGTCCGATCCTTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFISSRH*SDPSWA
Trigger: GGCCCATGAAGGATCGGATCAATGACGACTTGATAT...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATATCAAGTCGTCATTaGTCCGATCCTTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTISSRH*SDPSWA
Trigger: GGCCCATGAAGGATCGGATCAATGACGACTTGATAT...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTTGGACATCTGCTGGGGTaGGGAGGCTCTCATCTCATC +
Preference number: 4 (lower is better)
Translates to: QHNKWRCKFYWKRPSHQFGHLLG*GGSHLI
Trigger: GATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCC...AAATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp CCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCAGTGGTTATTATCACTaGAAAGTCTCTCCCCAAACA +
Preference number: 4 (lower is better)
Translates to: PSFILQCLFCPTLWPLCFSGYYH*KVSPQT
Trigger: TGTTTGGGGAGAGACTTTTCAGTGATAATAACCACT...GAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATGAAGCCCCATCACTCTaGTGGCTCTATCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHEAPSL*WLYLLL
Trigger: GAGCAAGAGATAGAGCCATCAGAGTGATGGGGCTTC...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTCCGATGTTCTTACTGTaGAGAAGCCCCATCACTCTG +
Preference number: 4 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPPMFLL*RSPITL
Trigger: CAGAGTGATGGGGCTTCTTCACAGTAAGAACATCGG...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCGGTTGCATGCTCAGTTaGGAAACCAAAGAAGTTATC +
Preference number: 4 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGGCMLS*ETKEVI
Trigger: GATAACTTCTTTGGTTTCTCAACTGAGCATGCAACC...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCGGTTGCATGCTCAGTTaGGAAACCAAAGAAGTTATC +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPGCMLS*ETKEVI
Trigger: GATAACTTCTTTGGTTTCTCAACTGAGCATGCAACC...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GAGTGCATTTGCACCAGATGTAATCTGGGTAACTTTCATGCCATTTCCATACAAGATCTGGCACTTTTCTaGAAGGGCCCAGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: ECICTRCNLGNFHAISIQDLALF*KGPACV
Trigger: CACACATGCTGGGCCCTTTCAGAAAAGTGCCAGATC...TTGTATGGAAATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTTCTGGGCTGAGTAGGTaGAACGGCGACCTAAAGTAT +
Preference number: 4 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPSGLSR*NGDLKY
Trigger: ATACTTTAGGTCGCCGTTTCACCTACTCAGCCCAGA...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATCTTTACTTTCTGGGCTaGGTAGGTGAAACGGCGACC +
Preference number: 4 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHLYFLG*VGETAT
Trigger: GGTCGCCGTTTCACCTACTCAGCCCAGAAAGTAAAG...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTCTCCAAACCAAGGTaGTGGCATGGCTTCAATGAG +
Preference number: 4 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFLSKPR*WHGFNE
Trigger: CTCATTGAAGCCATGCCATCACCTTGGTTTGGAGAG...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCAGCTGTACAAGAAATaGTTTCCAAAGCACAGGTTT +
Preference number: 4 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLQLYKK*FPKHRF
Trigger: AAACCTGTGCTTTGGAAATCATTTCTTGTACAGCTG...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTTTCAGAGGAGAAATATaGGACTGCAAGACATATCCA +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVFRGEI*DCKTYP
Trigger: TGGATATGTCTTGCAGTCTCATATTTCTCCTCTGAA...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCAGAGGAGAAATATaGGACTGCAAGACATATCCA +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGFRGEI*DCKTYP
Trigger: TGGATATGTCTTGCAGTCTCATATTTCTCCTCTGAA...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TCAGTTAAAGGAACAACAGCCTTTCACCTGGTGTGGTCAGTGGATTCGCATACAATGGAGACATTAAAGTaGCAGTGCTACTCAATGGGC +
Preference number: 4 (lower is better)
Translates to: SVKGTTAFHLVWSVDSHTMETLK*QCYSMG
Trigger: GCCCATTGAGTAGCACTGTCACTTTAATGTCTCCAT...TGTATGCGAATCCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR TCA 90 bp TTAAAGGAACAACAGCCTTTCACCTGGTGTGGTCAGTGGATTCGCATACAAGGTTGTCATGGCCAAAATTaGTCTTCAGTCCTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LKEQQPFTWCGQWIRIQGCHGQN*SSVLFH
Trigger: GTGGAAGAGGACTGAAGATCAATTTTGGCCATGACA...ACCTTGTATGCGAATCCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR TCA 90 bp GACCCTGAGTCTGCCATCCTCTGCTGCAGCACCTCCTGGTATAATCTTCGTAATATAGCCCAGAGTTTGTaGCATTTAAGTGATTTCGAA +
Preference number: 4 (lower is better)
Translates to: DPESAILCCSTSWYNLRNIAQSL*HLSDFE
Trigger: TTCGAAATCACTTAAATGTCACAAACTCTGGGCTAT...ATTACGAAGATTATACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTCAGGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529401.5
CDS-3UTR GCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACCCTTCCATCTTTTTGTaGAGCTCCTCCATCTATAAT +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYPSIFL*SSSIYN
Trigger: ATTATAGATGGAGGAGCTGCACAAAAAGATGGAAGG...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGCCTTCCATCTTTTTGTaGAGCTCCTCCATCTATAAT +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLPSIFL*SSSIYN
Trigger: ATTATAGATGGAGGAGCTGCACAAAAAGATGGAAGG...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCCTAAAGTGCCATTGTTaGCAGAGAGTAGATGGTTTT +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGLKCHC*QRVDGF
Trigger: AAAACCATCTACTCTCTGGCAACAATGGCACTTTAG...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGCTAAAGTGCCATTGTTaGCAGAGAGTAGATGGTTTT +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLLKCHC*QRVDGF
Trigger: AAAACCATCTACTCTCTGGCAACAATGGCACTTTAG...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATAATAGTTTGTTCACAGTaGTGTAAACAGGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFIIVCSQ*CKQVPE
Trigger: CTCCGGAACCTGTTTACAGCACTGTGAACAAACTAT...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTGCTGACGAGTTGCGGTaGTATGTTGGGAATGACTGG +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSADELR*YVGNDW
Trigger: CCAGTCATTCCCAACATAGCACCGCAACTCGTCAGC...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACTGCCTGCTCGTGGGATaGACCACGGAGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNCLLVG*TTEVNA
Trigger: GGCATTGACCTCCGTGGTGCATCCCACGAGCAGGCA...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAATGCCTGCTCGTGGGATaGACCACGGAGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKCLLVG*TTEVNA
Trigger: GGCATTGACCTCCGTGGTGCATCCCACGAGCAGGCA...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATACGGACCCGGAGCTCATaGTGTGGTTCATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFIRTRSS*CGSSSA
Trigger: AGCAGATGATGAACCACAGCATGAGCTCCGGGTCCG...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTCGGACCCGGAGCTCATaGTGTGGTTCATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILRTRSS*CGSSSA
Trigger: AGCAGATGATGAACCACAGCATGAGCTCCGGGTCCG...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCCAAAGTGATAGTCTCTaGCATCCACCTCGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFQSDSL*HPPRSL
Trigger: GAGACTACGAGGTGGATGGCAGAGACTATCACTTTG...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTGTGTTTGCCTCTTTCTaGTACAAATCTCACAGACTG +
Preference number: 4 (lower is better)
Translates to: PITDVGNGKADEVRVLAIVFASF*YKSHRL
Trigger: CAGTCTGTGAGATTTGTAGCAGAAAGAGGCAAACAC...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTGTGTTTGCCTCTTTCTaGTACAAATCTCACAGACTG +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSVFASF*YKSHRL
Trigger: CAGTCTGTGAGATTTGTAGCAGAAAGAGGCAAACAC...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCCAAGTATACAGTGTTTaGCTCTTTCTGCTACAAATC +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLQVYSV*LFLLQI
Trigger: GATTTGTAGCAGAAAGAGGCAAACACTGTATACTTG...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACATGAAAGGCCCAGATTaGTCTTCAATAACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYMKGPD*SSITSL
Trigger: CAAGCTTGTTATTGAAGAGCAATCTGGGCCTTTCAT...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCTGATGAGGTTCGAGTaGTGGCAATTTTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKLMRFE*WQFFFK
Trigger: TTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAG...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACCAACAAAAGGGAGAGTaGAACTTTCAGGTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYQQKGE*NFQVLN
Trigger: ATTCAAGACCTGAAAGTTGCACTCTCCCTTTTGTTG...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTGTGTGGCAGAATCCCTaGCAGGTCTGGATGTACCCC +
Preference number: 4 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVIVWQNP*QVWMYP
Trigger: GGGGTACATCCAGACCTGGCAGGGATTCTGCCACAC...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATAGTCATCAGATTTGCTaGAAAATACACCAGTTCATT +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHSHQIC*KIHQFI
Trigger: AATGAACTGGTGTATTTTGCAGCAAATCTGATGACT...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTAGTCATCAGATTTGCTaGAAAATACACCAGTTCATT +
Preference number: 4 (lower is better)
Translates to: PITLMALSLALLPSLHAGSHQIC*KIHQFI
Trigger: AATGAACTGGTGTATTTTGCAGCAAATCTGATGACT...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATACTGAGACCCCCGTGGTaGTACACATTGTACCAGAGC +
Preference number: 4 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFILRPPW*YTLYQS
Trigger: GCTCTGGTACAATGTGTAGCACCACGGGGGTCTCAG...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATAACAGAGGCACCCGAGTaGAGCTTTGTGAAGACAGGC +
Preference number: 4 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFITEAPE*SFVKTG
Trigger: GCCTGTCTTCACAAAGCTGCACTCGGGTGCCTCTGT...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTAGGAGGTACTCCACATaGTTCAAGGGAATTGATCTT +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTRRYST*FKGIDL
Trigger: AAGATCAATTCCCTTGAAGCATGTGGAGTACCTCCT...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTGCTGTTACAAGAAACTaGACAGCTGTACAAGAAATG +
Preference number: 4 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLAVTRN*TAVQEM
Trigger: CATTTCTTGTACAGCTGTGCAGTTTCTTGTAACAGC...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGGCTGTTACAAGAAACTaGACAGCTGTACAAGAAATG +
Preference number: 4 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKAVTRN*TAVQEM
Trigger: CATTTCTTGTACAGCTGTGCAGTTTCTTGTAACAGC...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCATTGGGAGTCAACCTTaGCACTTGGTTGTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFIGSQP*HLVVCP
Trigger: AGGACAGACAACCAAGTGGCAAGGTTGACTCCCAAT...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCCAGGAGTGTAAGCTGTaGAGTGTCTCTGTAAACTCC +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFQECKL*SVSVNS
Trigger: GGAGTTTACAGAGACACTGCACAGCTTACACTCCTG...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCACTGGCCGGAATAAATaGATGTTGCATAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPTGRNK*MLHSLF
Trigger: GAACAAGCTATGCAACATGCATTTATTCCGGCCAGT...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330014.11
CDS-3UTR GCA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCCTTGGGTCTTTCCACTaGCACAGGAGTCAATATCTC +
Preference number: 4 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTLGSFH*HRSQYL
Trigger: GAGATATTGACTCCTGTGGCAGTGGAAAGACCCAAG...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR GCA 90 bp ACATGTTCTGCAAGAACAGCACAGCAAATTAAAGAGATACCAAGCATTGAAGAGCCAGGTTCTCCTGTCTaGTGTCCGGTTCACACTTGC +
Preference number: 4 (lower is better)
Translates to: TCSARTAQQIKEIPSIEEPGSPV*CPVHTC
Trigger: GCAAGTGTGAACCGGACAGCAGACAGGAGAACCTGG...CTCTTCAATGCTTGGTATCTCTTTAATTTGCTGTGCTGTTCTTGCAGAACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR GCA 90 bp CTACCTAATGAGGGAAACACCAAACTACTCTGGTATGATCACAGAGGCATCCAAATGAGAAAGTGCAGCTaGTTGGCTTTCACATCCACC +
Preference number: 4 (lower is better)
Translates to: LPNEGNTKLLWYDHRGIQMRKCS*LAFTST
Trigger: GGTGGATGTGAAAGCCAAGCAGCTGCACTTTCTCAT...TTGGATGCCTCTGTGATCATACCAGAGTAGTTTGGTGTTTCCCTCATTAGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR GCA 90 bp GTTAAAGGAACAACAGCCTTTCACCTGGTGTGGTCAGTGGATTCGCATACAAGGGAGTCATTCACATCATaGCATCTCTTCGCATTCAAG +
Preference number: 4 (lower is better)
Translates to: VKGTTAFHLVWSVDSHTRESFTS*HLFAFK
Trigger: CTTGAATGCGAAGAGATGGCATGATGTGAATGACTC...CCTTGTATGCGAATCCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR GCA 90 bp GACCCTGAGTCTGCCATCCTCTGCTGCAGCACCTCCTGGTATAATCTTCGTAATTTCCAACGGAATAAATaGATGTTGCATAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: DPESAILCCSTSWYNLRNFQRNK*MLHSLF
Trigger: GAACAAGCTATGCAACATGCATTTATTCCGTTGGAA...ATTACGAAGATTATACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTCAGGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529401.5
CDS-3UTR GCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGAAGAAGAAAACATACTaGAGCTCCCGATTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKKKKTY*SSRFGK
Trigger: TTTACCAAATCGGGAGCTGCAGTATGTTTTCTTCTT...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR CCA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACAAGGACTGGCCTGTGCTaGGCTGAACCAACCATGTGG +
Preference number: 4 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTRTGLC*AEPTMW
Trigger: CCACATGGTTGGTTCAGCCCAGCACAGGCCAGTCCT...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTTGCTGCAGCACCTCCTaGTATAATCTTCGTAATAAA +
Preference number: 4 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLCCSTS*YNLRNK
Trigger: TTTATTACGAAGATTATACCAGGAGGTGCTGCAGCA...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTGCTGCAGCACCTCCTaGTATAATCTTCGTAATAAA +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGCCSTS*YNLRNK
Trigger: TTTATTACGAAGATTATACCAGGAGGTGCTGCAGCA...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAGTGCATTTGCACCAGATGTAATCTGGGTAACTTTCATGCCATTTCCATACAATCTCCAGGAATGTGTTaGTTCCCCACACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ECICTRCNLGNFHAISIQSPGMC*FPTPPA
Trigger: TGCAGGAGGTGTGGGGAACCAACACATTCCTGGAGA...TTGTATGGAAATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACGTGAGTAATATCAGGTaGACCATAAGGATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYVSNIR*TIRISH
Trigger: ATGACTGATCCTTATGGTCCACCTGATATTACTCAC...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTATATGTTGGGAATGACTaGTCATCTCAGAGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVYVGND*SSQSQV
Trigger: TACCTGACTCTGAGATGACCAGTCATTCCCAACATA...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATGAGGCATTGATAACGTaGAGAATATCTCCATATTTA +
Preference number: 4 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHEALIT*RISPYL
Trigger: TAAATATGGAGATATTCTCCACGTTATCAATGCCTC...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCGAGGCATTGATAACGTaGAGAATATCTCCATATTTA +
Preference number: 4 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAEALIT*RISPYL
Trigger: TAAATATGGAGATATTCTCCACGTTATCAATGCCTC...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTCTCGTAGTCTCGCTTTaGCCTCGTAGTATGAGGCAC +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSLVVSL*PRSMRH
Trigger: GTGCCTCATACTACGAGGCCAAAGCGAGACTACGAG...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCTCACAGACTGCACACTaGTTCCATATAAATTGTCAT +
Preference number: 4 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFSQTAH*FHINCH
Trigger: ATGACAATTTATATGGAACCAGTGTGCAGTCTGTGA...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTCCTCTGTTTCCTTCATaGCTTCATACAGTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVPLFPS*LHTVCV
Trigger: AACACAAACTGTATGAAGCCATGAAGGAAACAGAGG...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCCCTCTGTTTCCTTCATaGCTTCATACAGTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFPLFPS*LHTVCV
Trigger: AACACAAACTGTATGAAGCCATGAAGGAAACAGAGG...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTCAGCTAAATCAGCTCTaGACATCTGCTGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSQLNQL*TSAGVR
Trigger: CCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTG...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGATGAGGTTCGAGTGCTaGCAATTTTTCTTTAAAGCA +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKMRFEC*QFFFKA
Trigger: TGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCAT...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTCTCCCCAAACACCATaGGCAAAAGCAATGCTGATG +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFSPQTP*AKAMLM
Trigger: CATCAGCATTGCTTTTGCCCATGGTGTTTGGGGAGA...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCAGCAACACTAGTAAATaGAAAGCACATCACACGACC +
Preference number: 4 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGSNTSK*KAHHTT
Trigger: GGTCGTGTGATGTGCTTTCCATTTACTAGTGTTGCT...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTAGACAACACAACAAATaGAGGTGTAAATTCTATTGG +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPRQHNK*RCKFYW
Trigger: CCAATAGAATTTACACCTCCATTTGTTGTGTTGTCT...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCACCAGTTACACGATCTaGCACTTTTCTGAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFTSYTI*HFSERA
Trigger: GGCCCTTTCAGAAAAGTGCCAGATCGTGTAACTGGT...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GAGTGCATTTGCACCAGATGTAATCTGGGTAACTTTCATGCCATTTCCATACAATCTCGAGCCAGAGGTTaGAGAGTTCTTTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ECICTRCNLGNFHAISIQSRARG*RVLSWL
Trigger: GAGCCAGGAAAGAACTCTCCAACCTCTGGCTCGAGA...TTGTATGGAAATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAATCTCGAGCCAGAGGTTaGAGAGTTCTTTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKSRARG*RVLSWL
Trigger: GAGCCAGGAAAGAACTCTCCAACCTCTGGCTCGAGA...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTATTAGCCTGAGTCCTTaGCTTAAATATATTTGTAGG +
Preference number: 4 (lower is better)
Translates to: ALISSLGQKARQRFIPTPISLSP*LKYICR
Trigger: CCTACAAATATATTTAAGCCAAGGACTCAGGCTAAT...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGGCAGTGGCAAATCATTaGTGTAAAACAGTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGAVANH*CKTVRV
Trigger: GACCCTGACTGTTTTACACCAATGATTTGCCACTGC...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR CCA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCAAGCAACTTTGCAGTaGCAAATCATTGGTGTAAAA +
Preference number: 4 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKQATLQ*QIIGVK
Trigger: TTTTACACCAATGATTTGCCACTGCAAAGTTGCTTG...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR TCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTCAATTTCTGTCCCATTaGCATAAGGAATTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTQFLSH*HKELCP
Trigger: TGGACACAATTCCTTATGTCAATGGGACAGAAATTG...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACAATTTCTGTCCCATTaGCATAAGGAATTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVQFLSH*HKELCP
Trigger: TGGACACAATTCCTTATGTCAATGGGACAGAAATTG...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTTTGGACACTGACCATTTTCAATTTCTGTCCCATTaGCATAAGGAATTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RTPPSFFSRVTALDTDHFQFLSH*HKELCP
Trigger: TGGACACAATTCCTTATGTCAATGGGACAGAAATTG...AAAATGGTCAGTGTCCAAAGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR TCA 90 bp GAGGTAACAAAGCCACGGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACGTGCTTTGGAATTGGTaGGTACCTTCCTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: EVTKPRFTFFGHEPSIFHVLWNW*VPSWRD
Trigger: ATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCAC...GTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACCGTGGCTTTGTTACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR TCA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACACCGTTGGAGAGTCATTaGAGGCTGACGAGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTPLESH*RLTSCG
Trigger: ACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGG...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR TCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCGTCCACCAGCCAGAATaGAGGACACAAAAATACCTT +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFVHQPE*RTQKYL
Trigger: AAGGTATTTTTGTGTCCTTCATTCTGGCTGGTGGAC...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTTTAAAACTAAGTCCTTaGCTTGGCAGCCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFLKLSP*LGSPLS
Trigger: GGACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAA...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCGCTCATAGGAAAGAATaGGGTCTTCTTGTCCTCGTT +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFAHRKE*GLLVLV
Trigger: AACGAGGACAAGAAGACCTCATTCTTTCCTATGAGC...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCTTGATAGCATTTCCTaGTACATCAAGTATACAGTG +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFLDSIS*YIKYTV
Trigger: CACTGTATACTTGATGTATCAGGAAATGCTATCAAG...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACCTTGATAGCATTTCCTaGTACATCAAGTATACAGTG +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYLDSIS*YIKYTV
Trigger: CACTGTATACTTGATGTATCAGGAAATGCTATCAAG...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAGGACATCTGCTGGGGTaGGGAGGCTCTCATCTCATC +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKGHLLG*GGSHLI
Trigger: GATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCC...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTAATTGTCTTTCCTTGTaGCTCTATCTCTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSNCLSL*LYLFAL
Trigger: CAGAGCAAAGAGATAGAGTCACAAGGAAAGACAATT...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTGAAGCCCCATCACTCTaGTGGCTCTATCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILEAPSL*WLYLLL
Trigger: GAGCAAGAGATAGAGCCATCAGAGTGATGGGGCTTC...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACATGTTTAGCGTAAGATaGACAATGCCTGTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYMFSVR*TMPVFG
Trigger: TCCAAAAACAGGCATTGTTCATCTTACGCTAAACAT...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCGATGAAAGTAGGCCTTaGCCTGAAACTGGCGAATTG +
Preference number: 4 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFDESRP*PETGEL
Trigger: CAATTCGCCAGTTTCAGGTCAAGGCCTACTTTCATC...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTCATTGTACCAGAGCATaGAAAATAGCACCAGTTACA +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTHCTRA*KIAPVT
Trigger: TGTAACTGGTGCTATTTTTCATGCTCTGGTACAATG...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAACATGGACTTGCTGTCTaGATCAGCCATGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKHGLAV*ISHEPF
Trigger: AAAGGGCTCATGGCTGATTCAGACAGCAAGTCCATG...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCAGAGTCTGCCTTTATTaGAAGAAAATGTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPRVCLY*KKMSSE
Trigger: CTCTGAGGACATTTTCTTTCAATAAAGGCAGACTCT...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTCTCCAAACCAAGGTaGTGGCATGGCTTCAATGAG +
Preference number: 4 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEILSKPR*WHGFNE
Trigger: CTCATTGAAGCCATGCCATCACCTTGGTTTGGAGAG...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCAGCTGTACAAGAAATaGTTTCCAAAGCACAGGTTT +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPQLYKK*FPKHRF
Trigger: AAACCTGTGCTTTGGAAATCATTTCTTGTACAGCTG...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGACAAAACTGTCATATTaGAAGGATCTAACGGGTACA +
Preference number: 4 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKTKLSY*KDLTGT
Trigger: TGTACCCGTTAGATCCTTTCAATATGACAGTTTTGT...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GAAACACCAAACTACTCTGGTATGATCACAGAGGCATCCAACTGTAGTAATTATTTGATCCAGCTGGATTaGGGCCAAGAGCCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: ETPNYSGMITEASNCSNYLIQLD*GQEPGN
Trigger: GTTACCTGGCTCTTGGCCTCAATCCAGCTGGATCAA...ATAATTACTACAGTTGGATGCCTCTGTGATCATACCAGAGTAGTTTGGTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR TCA 90 bp GCACAGCAAATTAAAGAGATACCAAGCATTGAAGAGCAGCCAGAACGGAAAGGACAGGAACCCGCTGCTTaGTTGCTGTTTCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: AQQIKEIPSIEEQPERKGQEPAA*LLFLLF
Trigger: AAAAAGAAGAAACAGCAATCAAGCAGCGGGTTCCTG...TCCTTTCCGTTCTGGCTGCTCTTCAATGCTTGGTATCTCTTTAATTTGCTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR TCA 90 bp AACTCCAGCCATTGGATTGTAGGGCTTTTAAGCTACCTAATGAGGGAAACACCACAGTATCTGTCTTCTTaGCTGGCATTCTTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: NSSHWIVGLLSYLMRETPQYLSS*LAFLGL
Trigger: AAGACCCAAGAATGCCAGTCAAGAAGACAGATACTG...TGGTGTTTCCCTCATTAGGTAGCTTAAAAGCCCTACAATCCAATGGCTGGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR GCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTCGGCTGCAGCTGTGTTaGTTGGTGAGGTATGCATTC +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILRLQLC*LVRYAF
Trigger: GAATGCATACCTCACCAAGCAACACAGCTGCAGCCG...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR GCA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAAAGCAGGACTGGCCTGTaGTGGGCTGAACCAACCATG +
Preference number: 4 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKSRTGL*WAEPTM
Trigger: CATGGTTGGTTCAGCCCAGCACAGGCCAGTCCTGCT...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTTCTGCCATCCTCTGCTaGAGCACCTCCTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSSAILC*STSWYN
Trigger: ATTATACCAGGAGGTGCTGCAGCAGAGGATGGCAGA...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAATCTGCCATCCTCTGCTaGAGCACCTCCTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKSAILC*STSWYN
Trigger: ATTATACCAGGAGGTGCTGCAGCAGAGGATGGCAGA...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAAGAGTCTGCCATCCTCTaGTGCAGCACCTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQESAIL*CSTSWY
Trigger: ATACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTC...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAACCGAACGATAGACCCTaGTTCCTTCAGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQPNDRP*FLQGFH
Trigger: GTGGAAGCCCTGAAGGAAGCAGGGTCTATCGTTCGG...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACTAAAGTGCCATTGTTaGCAGAGAGTAGATGGTTTT +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVLKCHC*QRVDGF
Trigger: AAAACCATCTACTCTCTGGCAACAATGGCACTTTAG...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AGGAGAACCCAGGGTTTTACATCAAAATGGGTGAAGCAGAGGGATACTCCTTGTATAGTTTGTTCACAGTaGTGTAAACAGGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: RRTQGFTSKWVKQRDTPCIVCSQ*CKQVPE
Trigger: CTCCGGAACCTGTTTACAGCACTGTGAACAAACTAT...ACAAGGAGTATCCCTCTGCTTCACCCATTTTGATGTAAAACCCTGGGTTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAATGTGCAGGACTACCTTaGGAGGCTCTCCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKCAGLP*EALLPG
Trigger: CCCTGGAAGGAGAGCCTCGCAAGGTAGTCCTGCACA...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAATGTGCAGGACTACCTTaGGAGGCTCTCCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKCAGLP*EALLPG
Trigger: CCCTGGAAGGAGAGCCTCGCAAGGTAGTCCTGCACA...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAACCAGTGGAGCCTTTGTaGAGGACTACCTTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKPVEPL*RTTLRG
Trigger: GCCTCGCAAGGTAGTCCTGCACAAAGGCTCCACTGG...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACCCAGTGGAGCCTTTGTaGAGGACTACCTTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNPVEPL*RTTLRG
Trigger: GCCTCGCAAGGTAGTCCTGCACAAAGGCTCCACTGG...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTTTCAGGTTGATATTGTaGTATAATCGTCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFFRLIL*YNRHCL
Trigger: CAGACAGTGACGATTATAGCACAATATCAACCTGAA...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTTCAGGTTGATATTGTaGTATAATCGTCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLFRLIL*YNRHCL
Trigger: CAGACAGTGACGATTATAGCACAATATCAACCTGAA...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCTTCAGGTTGATATTGTaGTATAATCGTCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: PSFILQCLFCPTLWPLCFFRLIL*YNRHCL
Trigger: CAGACAGTGACGATTATAGCACAATATCAACCTGAA...GAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGTTCAGGTTGATATTGTaGTATAATCGTCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKFRLIL*YNRHCL
Trigger: CAGACAGTGACGATTATAGCACAATATCAACCTGAA...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTCGGACCCGGAGCTCATaGTGTGGTTCATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVIRTRSS*CGSSSA
Trigger: AGCAGATGATGAACCACAGCATGAGCTCCGGGTCCG...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTACACCGGATCACTGGTTTCCTaGTCACTCTGCTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: MKQILGILNRKVLGHKYTGSLVS*SLCSLF
Trigger: GAACAAGGAGCAGAGTGAGCAGGAAACCAGTGATCC...GGTGTACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTGGATCACTGGTTTCCTaGTCACTCTGCTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSGSLVS*SLCSLF
Trigger: GAACAAGGAGCAGAGTGAGCAGGAAACCAGTGATCC...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGACAAATCTCACAGACTaGACACTGGTTCCATATAAA +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLTNLTD*TLVPYK
Trigger: TTTATATGGAACCAGTGTGCAGTCTGTGAGATTTGT...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCACAAATCTCACAGACTaGACACTGGTTCCATATAAA +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFTNLTD*TLVPYK
Trigger: TTTATATGGAACCAGTGTGCAGTCTGTGAGATTTGT...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTCAAGTATACAGTGTTTaGCTCTTTCTGCTACAAATC +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVQVYSV*LFLLQI
Trigger: GATTTGTAGCAGAAAGAGGCAAACACTGTATACTTG...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACCAAGTATACAGTGTTTaGCTCTTTCTGCTACAAATC +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYQVYSV*LFLLQI
Trigger: GATTTGTAGCAGAAAGAGGCAAACACTGTATACTTG...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCCAAGTATACAGTGTTTaGCTCTTTCTGCTACAAATC +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFQVYSV*LFLLQI
Trigger: GATTTGTAGCAGAAAGAGGCAAACACTGTATACTTG...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGCAAGTATACAGTGTTTaGCTCTTTCTGCTACAAATC +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLQVYSV*LFLLQI
Trigger: GATTTGTAGCAGAAAGAGGCAAACACTGTATACTTG...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTAATGAAAGGCCCAGATTaGTCTTCAATAACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVMKGPD*SSITSL
Trigger: CAAGCTTGTTATTGAAGAGCAATCTGGGCCTTTCAT...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATAATGAAAGGCCCAGATTaGTCTTCAATAACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFIMKGPD*SSITSL
Trigger: CAAGCTTGTTATTGAAGAGCAATCTGGGCCTTTCAT...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCTCAGCTCTGGACATCTaGTGGGGTGAGGAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: NLGISLSPWLKYICRNLGSALDI*WGEEAL
Trigger: GAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGA...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTCTGATGAGGTTCGAGTaGTGGCAATTTTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVLMRFE*WQFFFK
Trigger: TTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAG...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGCTGATGAGGTTCGAGTaGTGGCAATTTTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLLMRFE*WQFFFK
Trigger: TTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAG...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCTGATGAGGTTCGAGTaGTGGCAATTTTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFLMRFE*WQFFFK
Trigger: TTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAG...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCAGTTATTCAACTATTTaGATGGCAGGCTCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: PSFILQCLFCPTLWPLCFSYSTI*MAGSGY
Trigger: ATAACCTGAGCCTGCCATGCAAATAGTTGAATAACT...GAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTTACATGCTGGTTTGCTaGACAGTGTGGCAGAATCCC +
Preference number: 4 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEIYMLVC*TVWQNP
Trigger: GGGATTCTGCCACACTGTGCAGCAAACCAGCATGTA...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACTGAAACTGGCGAATTaGAGACATGGACATATCTTT +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVLKLAN*RHGHIF
Trigger: AAAGATATGTCCATGTCTGCAATTCGCCAGTTTCAG...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTGAAACTGGCGAATTaGAGACATGGACATATCTTT +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPLKLAN*RHGHIF
Trigger: AAAGATATGTCCATGTCTGCAATTCGCCAGTTTCAG...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGACCCTCTCACCAATTTaGTTGGTGATTCTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGTLSPI*LVILQA
Trigger: TGCTTGAAGAATCACCAAGCAAATTGGTGAGAGGGT...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAAGCTCTGGACAAAGTTTaGAGTGTTAGCACCAGTCTG +
Preference number: 4 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKALDKV*SVSTSL
Trigger: CAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGC...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCGTGTCATTAGTCCAGTaGATGGACTTGCTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTVSLVQ*MDLLSE
Trigger: TTCAGACAGCAAGTCCATGCACTGGACTAATGACAC...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTATTGGGAGTCAACCTTaGCACTTGGTTGTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPIGSQP*HLVVCP
Trigger: AGGACAGACAACCAAGTGGCAAGGTTGACTCCCAAT...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTCTCCCTCCCATCCTGTaGTACAGCTCGGTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVILPPIL*YSSVEK
Trigger: TTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAG...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAACAGGAGTGTAAGCTGTaGAGTGTCTCTGTAAACTCC +
Preference number: 4 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKQECKL*SVSVNS
Trigger: GGAGTTTACAGAGACACTGCACAGCTTACACTCCTG...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCGGAATAAATGCATGTTaGATAGCTTGTTCACATTGT +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLGINAC*IACSHC
Trigger: ACAATGTGAACAAGCTATGCAACATGCATTTATTCC...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330014.11
ENST00000418306.6
CDS-3UTR GCA 90 bp GACCCTGAGTCTGCCATCCTCTGCTGCAGCACCTCCTGGTATAATCTTCGTAATGGAATAAATGCATGTTaGATAGCTTGTTCACATTGT +
Preference number: 4 (lower is better)
Translates to: DPESAILCCSTSWYNLRNGINAC*IACSHC
Trigger: ACAATGTGAACAAGCTATGCAACATGCATTTATTCC...ATTACGAAGATTATACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTCAGGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529401.5
CDS-3UTR GCA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAACTTGGGTCTTTCCACTaGCACAGGAGTCAATATCTC +
Preference number: 4 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKLGSFH*HRSQYL
Trigger: GAGATATTGACTCCTGTGGCAGTGGAAAGACCCAAG...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR GCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTGCATTTTTCAACAGCTaGTCCTCTGGTTTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSAFFNS*SSGFLN
Trigger: ATTAAGGAAACCAGAGGAGCAGCTGTTGAAAAATGC...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR GCA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTGAGTGCACAGTAACATaGAAAGAACATTGCAGTAAA +
Preference number: 4 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLECTVT*KEHCSK
Trigger: TTTACTGCAATGTTCTTTGCATGTTACTGTGCACTC...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398309.6
ENST00000524982.5
CDS-3UTR CCA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTATAAGCAGTGCATCGTaGGAGCAGTGGGAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVIISSAS*EQWEQR
Trigger: TCGCTGCTCCCACTGCTCCCACGATGCACTGCTTAT...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR CCA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACAGTCCTGAGGAGGGCATaGTCTGAGAACTGTACCCGA +
Preference number: 4 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTVLRRA*SENCTR
Trigger: TCGGGTACAGTTCTCAGACCATGCCCTCCTCAGGAC...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAAAAGTCCCTTTGCCCTTaGTGCTCGTCTTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKKSLCP*CSSCGG
Trigger: GCCCCCACAAGACGAGCACCAAGGGCAAAGGGACTT...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACAGCTGAACCAACCATGTaGGCAGGTACAATGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTAEPTM*AGTMLP
Trigger: GGGGAGCATTGTACCTGCCCACATGGTTGGTTCAGC...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTATGCTGCAGCACCTCCTaGTATAATCTTCGTAATAAA +
Preference number: 4 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVCCSTS*YNLRNK
Trigger: TTTATTACGAAGATTATACCAGGAGGTGCTGCAGCA...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTTGCTGCAGCACCTCCTaGTATAATCTTCGTAATAAA +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTCCSTS*YNLRNK
Trigger: TTTATTACGAAGATTATACCAGGAGGTGCTGCAGCA...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATAGTGAGTAATATCAGGTaGACCATAAGGATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFIVSNIR*TIRISH
Trigger: ATGACTGATCCTTATGGTCCACCTGATATTACTCAC...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTGCCAGAGAGTAGATaGTTTTCCATTGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLLPESR*FSIGGE
Trigger: TTCTCCACCAATGGAAAACCATCTACTCTCTGGCAA...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGTTGCCAGAGAGTAGATaGTTTTCCATTGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGLPESR*FSIGGE
Trigger: TTCTCCACCAATGGAAAACCATCTACTCTCTGGCAA...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTATGTTGGGAATGACTaGTCATCTCAGAGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLYVGND*SSQSQV
Trigger: TACCTGACTCTGAGATGACCAGTCATTCCCAACATA...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTACACATCTGGTCTCCTCTCTaGAGCTCCCCACTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: YETDIRDSQQEGFRAQVHIWSPL*SSPLRS
Trigger: AGACCTAAGTGGGGAGCTCCAGAGAGGAGACCAGAT...GTGTACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGCTCTCGTAGGTCATaGATTTTGGCCTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFCSRRS*ILASNR
Trigger: TCGATTTGAGGCCAAAATCCATGACCTACGAGAGCA...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCGGGAGCGTTTCTGATTaGTTCGCAGGGATCCGGACC +
Preference number: 4 (lower is better)
Translates to: NLGISLSPWLKYICRNLGGSVSD*FAGIRT
Trigger: GGTCCGGATCCCTGCGAACCAATCAGAAACGCTCCC...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACGGGAGCGTTTCTGATTaGTTCGCAGGGATCCGGACC +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNGSVSD*FAGIRT
Trigger: GGTCCGGATCCCTGCGAACCAATCAGAAACGCTCCC...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTGGGAGCGTTTCTGATTaGTTCGCAGGGATCCGGACC +
Preference number: 4 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQAGSVSD*FAGIRT
Trigger: GGTCCGGATCCCTGCGAACCAATCAGAAACGCTCCC...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TGCAAGGCTACCAGAAATGTGAGCGAAAGGCAAGTAAAAGCCGCAGAGGAGGCTGAGGCATTGATAACGTaGAGAATATCTCCATATTTA +
Preference number: 4 (lower is better)
Translates to: CKATRNVSERQVKAAEEAEALIT*RISPYL
Trigger: TAAATATGGAGATATTCTCCACGTTATCAATGCCTC...AGCCTCCTCTGCGGCTTTTACTTGCCTTTCGCTCACATTTCTGGTAGCCTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR CCA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCGAGGCATTGATAACGTaGAGAATATCTCCATATTTA +
Preference number: 4 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLEALIT*RISPYL
Trigger: TAAATATGGAGATATTCTCCACGTTATCAATGCCTC...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GTTTGCTATCAGAATAATTGGGGCCAGAGTCTGCCTTTATTGAAAGAAAATGTCCTCGTAGTCTCGCTTTaGCCTCGTAGTATGAGGCAC +
Preference number: 4 (lower is better)
Translates to: VCYQNNWGQSLPLLKENVLVVSL*PRSMRH
Trigger: GTGCCTCATACTACGAGGCCAAAGCGAGACTACGAG...GACATTTTCTTTCAATAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTAAATTGTCATTGTACTaGCCGGCTTCTATAAACTTG +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVKLSLY*PASINL
Trigger: CAAGTTTATAGAAGCCGGCCAGTACAATGACAATTT...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTAAATTGTCATTGTACTaGCCGGCTTCTATAAACTTG +
Preference number: 4 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLKLSLY*PASINL
Trigger: CAAGTTTATAGAAGCCGGCCAGTACAATGACAATTT...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTCACAGACTGCACACTaGTTCCATATAAATTGTCAT +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLSQTAH*FHINCH
Trigger: ATGACAATTTATATGGAACCAGTGTGCAGTCTGTGA...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACTCACAGACTGCACACTaGTTCCATATAAATTGTCAT +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYSQTAH*FHINCH
Trigger: ATGACAATTTATATGGAACCAGTGTGCAGTCTGTGA...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTTCACAGACTGCACACTaGTTCCATATAAATTGTCAT +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFSQTAH*FHINCH
Trigger: ATGACAATTTATATGGAACCAGTGTGCAGTCTGTGA...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTGATCATAGGTTTTCTTaGCTTGTTCCTCTGTTAGAC +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSDHRFS*LVPLLD
Trigger: GTCTAACAGAGGAACAAGCCAAGAAAACCTATGATC...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCGATCATAGGTTTTCTTaGCTTGTTCCTCTGTTAGAC +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPDHRFS*LVPLLD
Trigger: GTCTAACAGAGGAACAAGCCAAGAAAACCTATGATC...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACCTCTGTTTCCTTCATaGCTTCATACAGTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFIPLFPS*LHTVCV
Trigger: AACACAAACTGTATGAAGCCATGAAGGAAACAGAGG...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTCCTCTGTTTCCTTCATaGCTTCATACAGTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSPLFPS*LHTVCV
Trigger: AACACAAACTGTATGAAGCCATGAAGGAAACAGAGG...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACATGAGGTTCGAGTGCTaGCAATTTTTCTTTAAAGCA +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYMRFEC*QFFFKA
Trigger: TGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCAT...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGATGAGGTTCGAGTGCTaGCAATTTTTCTTTAAAGCA +
Preference number: 4 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKMRFEC*QFFFKA
Trigger: TGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCAT...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAATCTCCCCAAACACCATaGGCAAAAGCAATGCTGATG +
Preference number: 4 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKSPQTP*AKAMLM
Trigger: CATCAGCATTGCTTTTGCCCATGGTGTTTGGGGAGA...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGAACCCAGAGTAGAGTaGTTATTATCACTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVEPRVE*LLSLKS
Trigger: ACTTTTCAGTGATAATAACCACTCTACTCTGGGTTC...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTACCCAGCCTACATGCTaGTTTGCTGCACAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVITQPTC*FAAQCG
Trigger: GCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGT...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCAGCTGGGATCAGGAATaGCATTCTGGTGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFSWDQE*HSGVRK
Trigger: TTTTCTGACACCAGAATGCCATTCCTGATCCCAGCT...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTAGGTGTAAATTCTATTaGAAAAGACCCTCTCACCAA +
Preference number: 4 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLRCKFY*KRPSHQ
Trigger: TTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCT...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTAATACACCAGTTCATTaGAGCCATAGAGACATCAAC +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTNTPVH*SHRDIN
Trigger: GTTGATGTCTCTATGGCTCCAATGAACTGGTGTATT...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTAATACACCAGTTCATTaGAGCCATAGAGACATCAAC +
Preference number: 4 (lower is better)
Translates to: PITDVGNGKADEVRVLAINTPVH*SHRDIN
Trigger: GTTGATGTCTCTATGGCTCCAATGAACTGGTGTATT...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATAGCAAGCCTTCAGGTTaGAGAGAGCTCTGGACAAAG +
Preference number: 4 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHSKPSG*RELWTK
Trigger: CTTTGTCCAGAGCTCTCTCCAACCTGAAGGCTTGCT...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTAACGGGTACAGCCTaGTGCACTCAGAAGTTAAGA +
Preference number: 4 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFLTGTA*CTQKLR
Trigger: TCTTAACTTCTGAGTGCACCAGGCTGTACCCGTTAG...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTCTAACGGGTACAGCCTaGTGCACTCAGAAGTTAAGA +
Preference number: 4 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPLTGTA*CTQKLR
Trigger: TCTTAACTTCTGAGTGCACCAGGCTGTACCCGTTAG...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAAGGGCCTCTTACTTCGTaGGTTAGTCGAGGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKGPLTS*VSRGKE
Trigger: TTCCTTACCTCGACTAACCCACGAAGTAAGAGGCCC...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AAGAAACATGTTCTGCAAGAACAGCACAGCAAATTAAAGAGATACCAAGCATTGGCTTCTCCGTCTCCTTaGTGCCAGGTTCTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: KKHVLQEQHSKLKRYQALASPSP*CQVLLS
Trigger: AGACAGGAGAACCTGGCACCAAGGAGACGGAGAAGC...CAATGCTTGGTATCTCTTTAATTTGCTGTGCTGTTCTTGCAGAACATGTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR CCA 90 bp TTAAGCTACCTAATGAGGGAAACACCAAACTACTCTGGTATGATCACAGAGGCACCTCTTCCACCACGTTaGCATCCTTCAGTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: LSYLMRETPNYSGMITEAPLPPR*HPSVKG
Trigger: TCCTTTAACTGAAGGATGCCAACGTGGTGGAAGAGG...TGCCTCTGTGATCATACCAGAGTAGTTTGGTGTTTCCCTCATTAGGTAGCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR CCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCACGATAAAGTGTTGTTaGTGCAAGCAACTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPTIKCC*CKQLCS
Trigger: ACTGCAAAGTTGCTTGCACCAACAACACTTTATCGT...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648622.1
3UTR CAA 72 bp TGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATaGATGAAAGTAGGCCTTGACCTGAAACTGGCGAAT +
Preference number: 4 (lower is better)
Translates to: WHSGVRKLLGAI*MKVGLDLKLAN
Trigger: ATTCGCCAGTTTCAGGTCAAGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTGTGCTTTGGAATTGGTaGGTACCTTCCTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEIVLWNW*VPSWRD
Trigger: ATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCAC...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TCCTTGTATATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAGAGTCATTGAAGGCTaGCGAGTTGCGGTGCTATGT +
Preference number: 4 (lower is better)
Translates to: SLYMKQILGILNRKVLGHRVIEG*RVAVLC
Trigger: ACATAGCACCGCAACTCGTCAGCCTTCAATGACTCT...GTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATATACAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR TCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACCCGTTGGAGAGTCATTaGAGGCTGACGAGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNPLESH*RLTSCG
Trigger: ACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGG...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAAGTCCACCAGCCAGAATaGAGGACACAAAAATACCTT +
Preference number: 4 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKVHQPE*RTQKYL
Trigger: AAGGTATTTTTGTGTCCTTCATTCTGGCTGGTGGAC...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTTTGAGGGAATCCAGATaGAAGGCCCAGATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSLRESR*KAQIAL
Trigger: AAGAGCAATCTGGGCCTTTCATCTGGATTCCCTCAA...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCAAGGGATGTGCTGCATaGGAGTGTATCACTAATGTG +
Preference number: 4 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFKGCAA*ECITNV
Trigger: CACATTAGTGATACACTCTCATGCAGCACATCCCTT...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAAAAGGGATGTGCTGCATaGGAGTGTATCACTAATGTG +
Preference number: 4 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKKGCAA*ECITNV
Trigger: CACATTAGTGATACACTCTCATGCAGCACATCCCTT...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGTTCCAAAAATATCCATaGGGGCAACTCATTAAGGGA +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGFQKYP*GQLIKG
Trigger: TCCCTTAATGAGTTGCCCTCATGGATATTTTTGGAA...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAAGATGAAAGTAGGCCTTaGCCTGAAACTGGCGAATTG +
Preference number: 4 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKDESRP*PETGEL
Trigger: CAATTCGCCAGTTTCAGGTCAAGGCCTACTTTCATC...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GACAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTCTGGGCTGAGTAGGTaGAACGGCGACCTAAAGTAT +
Preference number: 4 (lower is better)
Translates to: DNTTNGGVNSIGKDPLTNSGLSR*NGDLKY
Trigger: ATACTTTAGGTCGCCGTTTCACCTACTCAGCCCAGA...ATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp CAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTTCTTTACTTTCTGGGCTaGGTAGGTGAAACGGCGACC +
Preference number: 4 (lower is better)
Translates to: QHNKWRCKFYWKRPSHQFLYFLG*VGETAT
Trigger: GGTCGCCGTTTCACCTACTCAGCCCAGAAAGTAAAG...AAATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCGGATATTTACAGACTTaGGTGTGTGTGTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTGYLQT*VCVCVS
Trigger: GGAAACACACACACACACTCAAGTCTGTAAATATCC...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTGGTTGTCTGTCCTCATaGGTTGCTAGGGAGATACTA +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSGCLSS*VAREIL
Trigger: TAGTATCTCCCTAGCAACTCATGAGGACAGACAACC...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp CAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTTTTGATCCAGCTGGATTaGGGCCAAGAGCCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: QHNKWRCKFYWKRPSHQFLIQLD*GQEPGN
Trigger: GTTACCTGGCTCTTGGCCTCAATCCAGCTGGATCAA...AAATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376104.7
CDS-3UTR TCA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTAGCTCTGAAGATTTTTaGAGTCTGTCATGGCACGGA +
Preference number: 4 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFSSEDF*SLSWHG
Trigger: TCCGTGCCATGACAGACTTCAAAAATCTTCAGAGCT...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR TCA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCAGAGGAGAAATATaGGACTGCAAGACATATCCA +
Preference number: 4 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLFRGEI*DCKTYP
Trigger: TGGATATGTCTTGCAGTCTCATATTTCTCCTCTGAA...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAATTACATCACAGGGGGTaGCCATGCAGCATTCTCGCT +
Preference number: 4 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQLHHRG*PCSILA
Trigger: AGCGAGAATGCTGCATGGTCACCCCCTGTGATGTAA...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426717.6
CDS-3UTR GCA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACTCCCTTTGCCCTTGGTaGTCGTCTTGTGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNSLCPW*SSCGGF
Trigger: AAAGCCCCCACAAGACGAGCACCAAGGGCAAAGGGA...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACCCCCACAAGTCCCTTTaGCCTTGGTGCTCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNPHKSL*PWCSSC
Trigger: ACAAGACGAGCACCAAGGGCAAAGGGACTTGTGGGG...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACGAGTCTGCCATCCTCTaGTGCAGCACCTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNESAIL*CSTSWY
Trigger: ATACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTC...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACCCGAACGATAGACCCTaGTTCCTTCAGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNPNDRP*FLQGFH
Trigger: GTGGAAGCCCTGAAGGAAGCAGGGTCTATCGTTCGG...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCCGAACGATAGACCCTaGTTCCTTCAGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQAPNDRP*FLQGFH
Trigger: GTGGAAGCCCTGAAGGAAGCAGGGTCTATCGTTCGG...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAAGCTGACGAGTTGCGGTaGTATGTTGGGAATGACTGG +
Preference number: 4 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQADELR*YVGNDW
Trigger: CCAGTCATTCCCAACATAGCACCGCAACTCGTCAGC...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTCACCACGGAGGTCAATaGCATTCACCGATAGGATCT +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILHHGGQ*HSPIGS
Trigger: AGATCCTATCGGTGAATGGCATTGACCTCCGTGGTG...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACCGGACCCGGAGCTCATaGTGTGGTTCATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNRTRSS*CGSSSA
Trigger: AGCAGATGATGAACCACAGCATGAGCTCCGGGTCCG...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCACAAATCTCACAGACTaGACACTGGTTCCATATAAA +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPTNLTD*TLVPYK
Trigger: TTTATATGGAACCAGTGTGCAGTCTGTGAGATTTGT...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATAACAAATCTCACAGACTaGACACTGGTTCCATATAAA +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFITNLTD*TLVPYK
Trigger: TTTATATGGAACCAGTGTGCAGTCTGTGAGATTTGT...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTCAAGTATACAGTGTTTaGCTCTTTCTGCTACAAATC +
Preference number: 4 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTQVYSV*LFLLQI
Trigger: GATTTGTAGCAGAAAGAGGCAAACACTGTATACTTG...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTCAAGTATACAGTGTTTaGCTCTTTCTGCTACAAATC +
Preference number: 4 (lower is better)
Translates to: PITDVGNGKADEVRVLAIQVYSV*LFLLQI
Trigger: GATTTGTAGCAGAAAGAGGCAAACACTGTATACTTG...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTTTTTGTTCTTCTAAATaGTCTTCTGTCGTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVFCSSK*SSVVVR
Trigger: TCTGACAACGACAGAAGAGCATTTAGAAGAACAAAA...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTTTTTGTTCTTCTAAATaGTCTTCTGTCGTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFFCSSK*SSVVVR
Trigger: TCTGACAACGACAGAAGAGCATTTAGAAGAACAAAA...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACTTTTGTTCTTCTAAATaGTCTTCTGTCGTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYFCSSK*SSVVVR
Trigger: TCTGACAACGACAGAAGAGCATTTAGAAGAACAAAA...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTTTTGTTCTTCTAAATaGTCTTCTGTCGTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLFCSSK*SSVVVR
Trigger: TCTGACAACGACAGAAGAGCATTTAGAAGAACAAAA...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTTTGTTCTTCTAAATaGTCTTCTGTCGTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGFCSSK*SSVVVR
Trigger: TCTGACAACGACAGAAGAGCATTTAGAAGAACAAAA...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATAAGTTATTCAACTATTTaGATGGCAGGCTCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFISYSTI*MAGSGY
Trigger: ATAACCTGAGCCTGCCATGCAAATAGTTGAATAACT...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAAGCCCCAGGCTCCGAGTaGATTTGCACCAGATGTAAT +
Preference number: 4 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQAPGSE*ICTRCN
Trigger: ATTACATCTGGTGCAAATGCACTCGGAGCCTGGGGC...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GAGTGCATTTGCACCAGATGTAATCTGGGTAACTTTCATGCCATTTCCATACAAGCTCTGGACAAAGTTTaGAGTGTTAGCACCAGTCTG +
Preference number: 4 (lower is better)
Translates to: ECICTRCNLGNFHAISIQALDKV*SVSTSL
Trigger: CAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGC...TTGTATGGAAATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAACTGAGACCCCCGTGGTaGTACACATTGTACCAGAGC +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKLRPPW*YTLYQS
Trigger: GCTCTGGTACAATGTGTAGCACCACGGGGGTCTCAG...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATATTGGGAGTCAACCTTaGCACTTGGTTGTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHIGSQP*HLVVCP
Trigger: AGGACAGACAACCAAGTGGCAAGGTTGACTCCCAAT...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCGAGAGAAGAAAAGTCTaGCATCCCATTGGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFERRKV*HPIGSQ
Trigger: TTGACTCCCAATGGGATGGCAGACTTTTCTTCTCTC...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATCAGGAGTGTAAGCTGTaGAGTGTCTCTGTAAACTCC +
Preference number: 4 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHQECKL*SVSVNS
Trigger: GGAGTTTACAGAGACACTGCACAGCTTACACTCCTG...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCTAATGAGGGAAACACCAAACTACTCTGGTATGATCACAGAGGCATCCAACTGGCATTTTTCAACAGCTaGTCCTCTGGTTTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: PNEGNTKLLWYDHRGIQLAFFNS*SSGFLN
Trigger: ATTAAGGAAACCAGAGGAGCAGCTGTTGAAAAATGC...CAGTTGGATGCCTCTGTGATCATACCAGAGTAGTTTGGTGTTTCCCTCATTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR GCA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATAATTGACCGGAATAAATaGATGTTGCATAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFIIDRNK*MLHSLF
Trigger: GAACAAGCTATGCAACATGCATTTATTCCGGTCAAT...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418306.6
CDS-3UTR CCA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACATAAGCAGTGCATCGTaGGAGCAGTGGGAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNISSAS*EQWEQR
Trigger: TCGCTGCTCCCACTGCTCCCACGATGCACTGCTTAT...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAATCCACCGCTTTACTGTaGGAAACCTCTGACACATCA +
Preference number: 4 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKSTALL*ETSDTS
Trigger: TGATGTGTCAGAGGTTTCCCACAGTAAAGCGGTGGA...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATCAGGTTCCGGAGGCCTaGTGTAGTCGTCGTCAACAA +
Preference number: 4 (lower is better)
Translates to: VINLGISLSPWLKYICRNQVPEA*CSRRQQ
Trigger: TTGTTGACGACGACTACACCAGGCCTCCGGAACCTG...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CCA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACCAGGTTCCGGAGGCCTaGTGTAGTCGTCGTCAACAA +
Preference number: 4 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNQVPEA*CSRRQQ
Trigger: TTGTTGACGACGACTACACCAGGCCTCCGGAACCTG...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCCAGGTTCCGGAGGCCTaGTGTAGTCGTCGTCAACAA +
Preference number: 4 (lower is better)
Translates to: NLGISLSPWLKYICRNLGQVPEA*CSRRQQ
Trigger: TTGTTGACGACGACTACACCAGGCCTCCGGAACCTG...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAACAGGTTCCGGAGGCCTaGTGTAGTCGTCGTCAACAA +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKQVPEA*CSRRQQ
Trigger: TTGTTGACGACGACTACACCAGGCCTCCGGAACCTG...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GTATATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTACAGGGGAATAGTGCCTaGGAGAAGCAGGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: VYETDIRDSQQEGFRAQVQGNSA*EKQAYH
Trigger: GTGATAAGCCTGCTTCTCCCAGGCACTATTCCCCTG...TACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTTTCACCGATAGGATCTaGTCTCCTCTCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVIFTDRI*SPLWSS
Trigger: GGAGCTCCAGAGAGGAGACCAGATCCTATCGGTGAA...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAATGCTCTCGTAGGTCATaGATTTTGGCCTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKCSRRS*ILASNR
Trigger: TCGATTTGAGGCCAAAATCCATGACCTACGAGAGCA...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTACTAAGTCCTTGACTTaGCAGCCCACTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILTKSLT*QPTVLA
Trigger: AGCAAGGACAGTGGGCTGCCAAGTCAAGGACTTAGT...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGGAGGCATTGATAACGTaGAGAATATCTCCATATTTA +
Preference number: 4 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKEALIT*RISPYL
Trigger: TAAATATGGAGATATTCTCCACGTTATCAATGCCTC...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACGAGGCATTGATAACGTaGAGAATATCTCCATATTTA +
Preference number: 4 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYEALIT*RISPYL
Trigger: TAAATATGGAGATATTCTCCACGTTATCAATGCCTC...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCAAATTGTCATTGTACTaGCCGGCTTCTATAAACTTG +
Preference number: 4 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGKLSLY*PASINL
Trigger: CAAGTTTATAGAAGCCGGCCAGTACAATGACAATTT...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTATGAGGTTCGAGTGCTaGCAATTTTTCTTTAAAGCA +
Preference number: 4 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSMRFEC*QFFFKA
Trigger: TGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCAT...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAACGATGGGGCTTAGTCTaGGCATGCACAGAACCCAGA +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKRWGLV*ACTEPR
Trigger: TCTGGGTTCTGTGCATGCCCAGACTAAGCCCCATCG...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAACCAGAAATAAGGCGATaGGGCTTAGTCTGGGCATGC +
Preference number: 4 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQPEIRR*GLVWAC
Trigger: GCATGCCCAGACTAAGCCCCATCGCCTTATTTCTGG...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCGTTTGCTGCACAGTGTaGCAGAATCCCTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: NLGISLSPWLKYICRNLGVCCTV*QNPCQV
Trigger: GACCTGGCAGGGATTCTGCCACACTGTGCAGCAAAC...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTTACAAAACCAAGGGTTaGTGGTTCAATTTGATTGTA +
Preference number: 4 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFYKTKG*WFNLIV
Trigger: TACAATCAAATTGAACCACCAACCCTTGGTTTTGTA...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCAGACAACACAACAAATaGAGGTGTAAATTCTATTGG +
Preference number: 4 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFRQHNK*RCKFYW
Trigger: CCAATAGAATTTACACCTCCATTTGTTGTGTTGTCT...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTGGTTGGAGAGAGCTCTaGACAAAGTTTGCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFGWREL*TKFAVL
Trigger: TAACACTGCAAACTTTGTCCAGAGCTCTCTCCAACC...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTACCAGTTACACGATCTaGCACTTTTCTGAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSTSYTI*HFSERA
Trigger: GGCCCTTTCAGAAAAGTGCCAGATCGTGTAACTGGT...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTAAGCTGAGACCCCCGTaGTGCTACACATTGTACCAG +
Preference number: 4 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVIKLRPP*CYTLYQ
Trigger: CTGGTACAATGTGTAGCACCACGGGGGTCTCAGCTT...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTTGGAGAGTTCTTTCCTaGCTCGGAGTCCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQAWRVLS*LGVLKG
Trigger: GCCCTTCAGGACTCCGAGCCAGGAAAGAACTCTCCA...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAACGATACTTAGTACAGTaGTGGACAGGCATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKRYLVQ*WTGIQA
Trigger: TGCTTGGATGCCTGTCCACCACTGTACTAAGTATCG...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR CCA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATATACATGCACGAGTTCTaGGCCTCTTACTTCGTGGGT +
Preference number: 4 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFIYMHEF*ASYFVG
Trigger: ACCCACGAAGTAAGAGGCCCAGAACTCGTGCATGTA...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CCA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATACCACACACACGATCCTaGGCATGTGCTACTAAAGAG +
Preference number: 4 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFIPHTRS*ACATKE
Trigger: CTCTTTAGTAGCACATGCCCAGGATCGTGTGTGTGG...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398309.6
CDS-3UTR CCA 90 bp AACTCCAGCCATTGGATTGTAGGGCTTTTAAGCTACCTAATGAGGGAAACACCAAGGAAAGCAATCCCTTaGCATGGAGACATTAAAGTG +
Preference number: 4 (lower is better)
Translates to: NSSHWIVGLLSYLMRETPRKAIP*HGDIKV
Trigger: CACTTTAATGTCTCCATGCCAAGGGATTGCTTTCCT...TGGTGTTTCCCTCATTAGGTAGCTTAAAAGCCCTACAATCCAATGGCTGGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR CCA 90 bp CAGTTAAAGGAACAACAGCCTTTCACCTGGTGTGGTCAGTGGATTCGCATACAACATCCTAGCAAAGCTTaGAATAAGCTGCTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: QLKEQQPFTWCGQWIRIQHPSKA*NKLLLK
Trigger: CTTTAAGAGCAGCTTATTCCAAGCTTTGCTAGGATG...TTGTATGCGAATCCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
3UTR CAA 72 bp GATGATCTTTGTCTAAATTGTCCGCCTGTCTTAGCTTaGTCCTCAGCTGTTACAAGAAACTGCACAGCTGTA +
Preference number: 4 (lower is better)
Translates to: DDLCLNCPPVLA*SSAVTRNCTAV
Trigger: TACAGCTGTGCAGTTTCTTGTAACAGCTGAGGACAAAGCTAAGACAGGCGGACAATTTAGACAAAGATCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CAA 72 bp AAGGATCTAATGGGACTGAACATCAAACTCCAGCCATaGGATTGTAGGGCTTTTAAGCTACCTAATGAGGGA +
Preference number: 4 (lower is better)
Translates to: KDLMGLNIKLQP*DCRAFKLPNEG
Trigger: TCCCTCATTAGGTAGCTTAAAAGCCCTACAATCCAATGGCTGGAGTTTGATGTTCAGTCCCATTAGATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR TCA 90 bp TCCTTGTATATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACACTGTGGGAAACCTCTaGCACATCAACCTCATTCAC +
Preference number: 4 (lower is better)
Translates to: SLYMKQILGILNRKVLGHTVGNL*HINLIH
Trigger: GTGAATGAGGTTGATGTGTCAGAGGTTTCCCACAGT...GTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATATACAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR TCA 90 bp GACAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATGTGCTTTGGAATTGGTaGGTACCTTCCTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: DNTTNGGVNSIGKDPLTNVLWNW*VPSWRD
Trigger: ATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCAC...ATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR TCA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATAGTGCTTTGGAATTGGTaGGTACCTTCCTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFIVLWNW*VPSWRD
Trigger: ATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCAC...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR TCA 90 bp GAGTGCATTTGCACCAGATGTAATCTGGGTAACTTTCATGCCATTTCCATACAAGTCCACCAGCCAGAATaGAGGACACAAAAATACCTT +
Preference number: 4 (lower is better)
Translates to: ECICTRCNLGNFHAISIQVHQPE*RTQKYL
Trigger: AAGGTATTTTTGTGTCCTTCATTCTGGCTGGTGGAC...TTGTATGGAAATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR TCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTTTAAAACTAAGTCCTTaGCTTGGCAGCCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILLKLSP*LGSPLS
Trigger: GGACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAA...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGATGTTTAGCGTAAGATaGACAATGCCTGTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGMFSVR*TMPVFG
Trigger: TCCAAAAACAGGCATTGTTCATCTTACGCTAAACAT...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAAGTTGGTGGTTCAATTTaGTTGTACTTAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKVGGSI*LYLATA
Trigger: TGCTGTGGCTAAGTACAATCAAATTGAACCACCAAC...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCGTTGGTGGTTCAATTTaGTTGTACTTAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFVGGSI*LYLATA
Trigger: TGCTGTGGCTAAGTACAATCAAATTGAACCACCAAC...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp CATAGCAAAACAAATAGTAGCATATGTGTAAGTTCACCTTTGCCCACTGAATTCGGCGAGGAAAAACACTaGGACTTCGAGAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: HSKTNSSICVSSPLPTEFGEEKH*DFERSQ
Trigger: TTGGCTTCTCTCGAAGTCTCAGTGTTTTTCCTCGCC...GAATTCAGTGGGCAAAGGTGAACTTACACATATGCTACTATTTGTTTTGCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR GCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACAGCTGCTATAAGCAGTaGATCGTGGGAGCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNSCYKQ*IVGAVG
Trigger: TCCCACTGCTCCCACGATGCACTGCTTATAGCAGCT...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR GCA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAGCTGCTATAAGCAGTaGATCGTGGGAGCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNSCYKQ*IVGAVG
Trigger: TCCCACTGCTCCCACGATGCACTGCTTATAGCAGCT...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp GAGGTAACAAAGCCACGGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACGGTATGCATTCATACTaGACTGATGCCTACTCTTTC +
Preference number: 4 (lower is better)
Translates to: EVTKPRFTFFGHEPSIFHGMHSY*TDAYSF
Trigger: GAAAGAGTAGGCATCAGTGCAGTATGAATGCATACC...GTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACCGTGGCTTTGTTACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTATAGTTTGTTCACAGTaGTGTAAACAGGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFIVCSQ*CKQVPE
Trigger: CTCCGGAACCTGTTTACAGCACTGTGAACAAACTAT...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GAGGTAACAAAGCCACGGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACATAGTTTGTTCACAGTaGTGTAAACAGGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: EVTKPRFTFFGHEPSIFHIVCSQ*CKQVPE
Trigger: CTCCGGAACCTGTTTACAGCACTGTGAACAAACTAT...GTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACCGTGGCTTTGTTACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAAATAGTTTGTTCACAGTaGTGTAAACAGGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKIVCSQ*CKQVPE
Trigger: CTCCGGAACCTGTTTACAGCACTGTGAACAAACTAT...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACGCTGACGAGTTGCGGTaGTATGTTGGGAATGACTGG +
Preference number: 4 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNADELR*YVGNDW
Trigger: CCAGTCATTCCCAACATAGCACCGCAACTCGTCAGC...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTGTGGTTCATCATCTaGTCTCGTAGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEILWFII*SRRSWI
Trigger: AATCCATGACCTACGAGAGCAGATGATGAACCACAG...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAACTGTGGTTCATCATCTaGTCTCGTAGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKLWFII*SRRSWI
Trigger: AATCCATGACCTACGAGAGCAGATGATGAACCACAG...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTTATGACTCTCCTGGCTTaGCACCACTCATCATCAGAG +
Preference number: 4 (lower is better)
Translates to: QHNKWRCKFYWKRPSHQFMTLLA*HHSSSE
Trigger: CTCTGATGATGAGTGGTGGCAAGCCAGGAGAGTCAT...AAATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GTTTGCTATCAGAATAATTGGGGCCAGAGTCTGCCTTTATTGAAAGAAAATGTCCAAAGTGATAGTCTCTaGCATCCACCTCGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: VCYQNNWGQSLPLLKENVQSDSL*HPPRSL
Trigger: GAGACTACGAGGTGGATGGCAGAGACTATCACTTTG...GACATTTTCTTTCAATAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTCAAAGTGATAGTCTCTaGCATCCACCTCGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILQSDSL*HPPRSL
Trigger: GAGACTACGAGGTGGATGGCAGAGACTATCACTTTG...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCAAGTATACAGTGTTTaGCTCTTTCTGCTACAAATC +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGQVYSV*LFLLQI
Trigger: GATTTGTAGCAGAAAGAGGCAAACACTGTATACTTG...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCTTTTGTTCTTCTAAATaGTCTTCTGTCGTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPFCSSK*SSVVVR
Trigger: TCTGACAACGACAGAAGAGCATTTAGAAGAACAAAA...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCCTACCCAGCCTACATaGTGGTTTGCTGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQAPTQPT*WFAAQC
Trigger: ACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGG...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTTGGCTCCGAGTGCATTTaGACCAGATGTAATCTGGGT +
Preference number: 4 (lower is better)
Translates to: QHNKWRCKFYWKRPSHQFGSECI*TRCNLG
Trigger: ACCCAGATTACATCTGGTGCAAATGCACTCGGAGCC...AAATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACGCCCCAGGCTCCGAGTaGATTTGCACCAGATGTAAT +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNAPGSE*ICTRCN
Trigger: ATTACATCTGGTGCAAATGCACTCGGAGCCTGGGGC...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GTTTGCTATCAGAATAATTGGGGCCAGAGTCTGCCTTTATTGAAAGAAAATGTCGCTCTGGACAAAGTTTaGAGTGTTAGCACCAGTCTG +
Preference number: 4 (lower is better)
Translates to: VCYQNNWGQSLPLLKENVALDKV*SVSTSL
Trigger: CAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGC...GACATTTTCTTTCAATAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTGTGTCATTAGTCCAGTaGATGGACTTGCTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSVSLVQ*MDLLSE
Trigger: TTCAGACAGCAAGTCCATGCACTGGACTAATGACAC...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATGTGTCATTAGTCCAGTaGATGGACTTGCTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHVSLVQ*MDLLSE
Trigger: TTCAGACAGCAAGTCCATGCACTGGACTAATGACAC...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTGAGGAGGAAGAGGTTTaGTATCAGAATAATTGGGGC +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSEEEEV*YQNNWG
Trigger: GCCCCAATTATTCTGATAGCAAACCTCTTCCTCCTC...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp AAATGTGAGCGAAAGGCAAGTAAAAGCCGCAGAGGAGGCTGCATTAAGAAAACTAACCCGCTGCTTGATTaGTGTTTCTTCTTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: KCERKASKSRRGGCIKKTNPLLD*CFFFLA
Trigger: TGCTAAAAAGAAGAAACAGCAATCAAGCAGCGGGTT...AGTTTTCTTAATGCAGCCTCCTCTGCGGCTTTTACTTGCCTTTCGCTCACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR CCA 90 bp GTTTGCTATCAGAATAATTGGGGCCAGAGTCTGCCTTTATTGAAAGAAAATGTCTCCACCGCTTTACTGTaGGAAACCTCTGACACATCA +
Preference number: 4 (lower is better)
Translates to: VCYQNNWGQSLPLLKENVSTALL*ETSDTS
Trigger: TGATGTGTCAGAGGTTTCCCACAGTAAAGCGGTGGA...GACATTTTCTTTCAATAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CCA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACTCTCCAGGAATGTGTTaGTTCCCCACACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNSPGMC*FPTPPA
Trigger: TGCAGGAGGTGTGGGGAACCAACACATTCCTGGAGA...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAATCTCCAGGAATGTGTTaGTTCCCCACACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKSPGMC*FPTPPA
Trigger: TGCAGGAGGTGTGGGGAACCAACACATTCCTGGAGA...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTTTGCCAGAGAGTAGATaGTTTTCCATTGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFLPESR*FSIGGE
Trigger: TTCTCCACCAATGGAAAACCATCTACTCTCTGGCAA...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAGGTAACAAAGCCACGGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTTGCCAGAGAGTAGATaGTTTTCCATTGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: EVTKPRFTFFGHEPSIFHLPESR*FSIGGE
Trigger: TTCTCCACCAATGGAAAACCATCTACTCTCTGGCAA...GTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACCGTGGCTTTGTTACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACCAGGGGAATAGTGCCTaGGAGAAGCAGGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNQGNSA*EKQAYH
Trigger: GTGATAAGCCTGCTTCTCCCAGGCACTATTCCCCTG...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATATCTGGTCTCCTCTCTaGAGCTCCCCACTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: VINLGISLSPWLKYICRNIWSPL*SSPLRS
Trigger: AGACCTAAGTGGGGAGCTCCAGAGAGGAGACCAGAT...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAATTCACCGATAGGATCTaGTCTCCTCTCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKFTDRI*SPLWSS
Trigger: GGAGCTCCAGAGAGGAGACCAGATCCTATCGGTGAA...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTGTAGGTCATGGATTTTaGCCTCAAATCGAGCGTAAT +
Preference number: 4 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFVGHGF*PQIERN
Trigger: ATTACGCTCGATTTGAGGCCAAAATCCATGACCTAC...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAGTGCATTTGCACCAGATGTAATCTGGGTAACTTTCATGCCATTTCCATACAATGCTCTCGTAGGTCATaGATTTTGGCCTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: ECICTRCNLGNFHAISIQCSRRS*ILASNR
Trigger: TCGATTTGAGGCCAAAATCCATGACCTACGAGAGCA...TTGTATGGAAATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GTAGCAATGCCTCAAATCCTTTTCATGGTAGGAGATAGCTCAGGGGTATCTCCTAAATTGTCATTGTACTaGCCGGCTTCTATAAACTTG +
Preference number: 4 (lower is better)
Translates to: VAMPQILFMVGDSSGVSPKLSLY*PASINL
Trigger: CAAGTTTATAGAAGCCGGCCAGTACAATGACAATTT...AGGAGATACCCCTGAGCTATCTCCTACCATGAAAAGGATTTGAGGCATTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTCACAGACTGCACACTaGTTCCATATAAATTGTCAT +
Preference number: 4 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLSQTAH*FHINCH
Trigger: ATGACAATTTATATGGAACCAGTGTGCAGTCTGTGA...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCGATCATAGGTTTTCTTaGCTTGTTCCTCTGTTAGAC +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFDHRFS*LVPLLD
Trigger: GTCTAACAGAGGAACAAGCCAAGAAAACCTATGATC...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GAGTGCATTTGCACCAGATGTAATCTGGGTAACTTTCATGCCATTTCCATACAAGTTCATCCCTACACCTaGCACTTTGAGCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: ECICTRCNLGNFHAISIQVHPYT*HFEQTK
Trigger: TTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAAC...TTGTATGGAAATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACCAGCTAAATCAGCTCTaGACATCTGCTGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNQLNQL*TSAGVR
Trigger: CCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTG...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCCATCCACTCTAAAGTaGGAAACCAACTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFPSTLK*ETNSSS
Trigger: ACTAGAAGAGTTGGTTTCCCACTTTAGAGTGGATGG...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATCCAGAAATAAGGCGATaGGGCTTAGTCTGGGCATGC +
Preference number: 4 (lower is better)
Translates to: VINLGISLSPWLKYICRNPEIRR*GLVWAC
Trigger: GCATGCCCAGACTAAGCCCCATCGCCTTATTTCTGG...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTAATCCCTGCCAGGTCTaGATGTACCCCAGAAATAAG +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILNPCQV*MYPRNK
Trigger: CTTATTTCTGGGGTACATCCAGACCTGGCAGGGATT...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GTTTGCTATCAGAATAATTGGGGCCAGAGTCTGCCTTTATTGAAAGAAAATGTCAATCCCTGCCAGGTCTaGATGTACCCCAGAAATAAG +
Preference number: 4 (lower is better)
Translates to: VCYQNNWGQSLPLLKENVNPCQV*MYPRNK
Trigger: CTTATTTCTGGGGTACATCCAGACCTGGCAGGGATT...GACATTTTCTTTCAATAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCAATACACCAGTTCATTaGAGCCATAGAGACATCAAC +
Preference number: 4 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTNTPVH*SHRDIN
Trigger: GTTGATGTCTCTATGGCTCCAATGAACTGGTGTATT...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCATTAGCCTGAGTCCTTaGCTTAAATATATTTGTAGG +
Preference number: 4 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPISLSP*LKYICR
Trigger: CCTACAAATATATTTAAGCCAAGGACTCAGGCTAAT...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAATACATGCACGAGTTCTaGGCCTCTTACTTCGTGGGT +
Preference number: 4 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQYMHEF*ASYFVG
Trigger: ACCCACGAAGTAAGAGGCCCAGAACTCGTGCATGTA...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGTTAAATACTTTACAATaGGATCGCATCGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGLNTLQ*DRIADC
Trigger: ACAGTCTGCGATGCGATCCCATTGTAAAGTATTTAA...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398309.6
CDS-3UTR CCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACAGCCCGAGAAACACTTaGCCGTTGCATAGCGAAAGC +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNSPRNT*PLHSES
Trigger: GCTTTCGCTATGCAACGGCCAAGTGTTTCTCGGGCT...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418306.6
CDS-3UTR CCA 90 bp TTTTACATCAAAATGGGTGAAGCAGAGGGATACTCCTTGTATATGAAACAGATAAGCCCGAGAAACACTTaGCCGTTGCATAGCGAAAGC +
Preference number: 4 (lower is better)
Translates to: FYIKMGEAEGYSLYMKQISPRNT*PLHSES
Trigger: GCTTTCGCTATGCAACGGCCAAGTGTTTCTCGGGCT...TATCTGTTTCATATACAAGGAGTATCCCTCTGCTTCACCCATTTTGATGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp ACATCAAACTCCAGCCATTGGATTGTAGGGCTTTTAAGCTACCTAATGAGGGAATCAAACTCCAGCCATTaGATTGTAGGGCTTTTAAGC +
Preference number: 4 (lower is better)
Translates to: TSNSSHWIVGLLSYLMRESNSSH*IVGLLS
Trigger: GCTTAAAAGCCCTACAATCCAATGGCTGGAGTTTGA...TTCCCTCATTAGGTAGCTTAAAAGCCCTACAATCCAATGGCTGGAGTTTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR TCA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACAAGCTGTGTTGCTTGGTaGGGTATGCATTCATACTGC +
Preference number: 4 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTSCVAW*GMHSYC
Trigger: GCAGTATGAATGCATACCTCACCAAGCAACACAGCT...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR TCA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACAACTGTGGGAAACCTCTaGCACATCAACCTCATTCAC +
Preference number: 4 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTTVGNL*HINLIH
Trigger: GTGAATGAGGTTGATGTGTCAGAGGTTTCCCACAGT...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR TCA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAGAGTCATTGAAGGCTaGCGAGTTGCGGTGCTATGT +
Preference number: 4 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNRVIEG*RVAVLC
Trigger: ACATAGCACCGCAACTCGTCAGCCTTCAATGACTCT...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR TCA 90 bp GTATATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTATTAAAACTAAGTCCTTaGCTTGGCAGCCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: VYETDIRDSQQEGFRAQVLKLSP*LGSPLS
Trigger: GGACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAA...TACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR TCA 90 bp GTATATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTAATATCAAGTCGTCATTaGTCCGATCCTTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: VYETDIRDSQQEGFRAQVISSRH*SDPSWA
Trigger: GGCCCATGAAGGATCGGATCAATGACGACTTGATAT...TACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR TCA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCCGATGTTCTTACTGTaGAGAAGCCCCATCACTCTG +
Preference number: 4 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQAPMFLL*RSPITL
Trigger: CAGAGTGATGGGGCTTCTTCACAGTAAGAACATCGG...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAAGGTTGCATGCTCAGTTaGGAAACCAAAGAAGTTATC +
Preference number: 4 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKGCMLS*ETKEVI
Trigger: GATAACTTCTTTGGTTTCTCAACTGAGCATGCAACC...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCCATTGTACCAGAGCATaGAAAATAGCACCAGTTACA +
Preference number: 4 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFHCTRA*KIAPVT
Trigger: TGTAACTGGTGCTATTTTTCATGCTCTGGTACAATG...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTAAGCACAGGTTTCAGTaGGGAAGGATATTTACAGAC +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSKHRFQ*GRIFTD
Trigger: GTCTGTAAATATCCTTCCTCACTGAAACCTGTGCTT...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GAGTGCATTTGCACCAGATGTAATCTGGGTAACTTTCATGCCATTTCCATACAAAAGCACAGGTTTCAGTaGGGAAGGATATTTACAGAC +
Preference number: 4 (lower is better)
Translates to: ECICTRCNLGNFHAISIQKHRFQ*GRIFTD
Trigger: GTCTGTAAATATCCTTCCTCACTGAAACCTGTGCTT...TTGTATGGAAATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTCAGCTGTACAAGAAATaGTTTCCAAAGCACAGGTTT +
Preference number: 4 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPQLYKK*FPKHRF
Trigger: AAACCTGTGCTTTGGAAATCATTTCTTGTACAGCTG...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAAGGTTGTCTGTCCTCATaGGTTGCTAGGGAGATACTA +
Preference number: 4 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQGCLSS*VAREIL
Trigger: TAGTATCTCCCTAGCAACTCATGAGGACAGACAACC...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCACAAAACTGTCATATTaGAAGGATCTAACGGGTACA +
Preference number: 4 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTTKLSY*KDLTGT
Trigger: TGTACCCGTTAGATCCTTTCAATATGACAGTTTTGT...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACTTTCAGGTCTCAGTTTaGTCCAGCTGGATTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNFQVSV*SSWIEA
Trigger: GGCCTCAATCCAGCTGGATCAAACTGAGACCTGAAA...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR TCA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAAGCAATCTGTAAGCTCTaGAGATTTTTGAAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKAICKL*RFLKSV
Trigger: GACAGACTTCAAAAATCTTCAGAGCTTACAGATTGC...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR TCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAGTCGAGGTAAGGAATaGTCATGTGGAGCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKSRGKE*SCGASS
Trigger: TGAGGACGCTCCACATGATCATTCCTTACCTCGACT...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAATCTGCCATCCTCTGCTaGAGCACCTCCTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKSAILC*STSWYN
Trigger: ATTATACCAGGAGGTGCTGCAGCAGAGGATGGCAGA...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACTCTGCCATCCTCTGCTaGAGCACCTCCTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNSAILC*STSWYN
Trigger: ATTATACCAGGAGGTGCTGCAGCAGAGGATGGCAGA...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACTCTGCCATCCTCTGCTaGAGCACCTCCTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNSAILC*STSWYN
Trigger: ATTATACCAGGAGGTGCTGCAGCAGAGGATGGCAGA...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAACCTTCCATCTTTTTGTaGAGCTCCTCCATCTATAAT +
Preference number: 4 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKPSIFL*SSSIYN
Trigger: ATTATAGATGGAGGAGCTGCACAAAAAGATGGAAGG...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACCACCACGGAGGTCAATaGCATTCACCGATAGGATCT +
Preference number: 4 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNHHGGQ*HSPIGS
Trigger: AGATCCTATCGGTGAATGGCATTGACCTCCGTGGTG...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAACACCACGGAGGTCAATaGCATTCACCGATAGGATCT +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKHHGGQ*HSPIGS
Trigger: AGATCCTATCGGTGAATGGCATTGACCTCCGTGGTG...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTATGACTCTCCTGGCTTaGCACCACTCATCATCAGAG +
Preference number: 4 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQAMTLLA*HHSSSE
Trigger: CTCTGATGATGAGTGGTGGCAAGCCAGGAGAGTCAT...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAATGACTCTCCTGGCTTaGCACCACTCATCATCAGAG +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKMTLLA*HHSSSE
Trigger: CTCTGATGATGAGTGGTGGCAAGCCAGGAGAGTCAT...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACGGATCACTGGTTTCCTaGTCACTCTGCTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNGSLVS*SLCSLF
Trigger: GAACAAGGAGCAGAGTGAGCAGGAAACCAGTGATCC...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTGGATCACTGGTTTCCTaGTCACTCTGCTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQAGSLVS*SLCSLF
Trigger: GAACAAGGAGCAGAGTGAGCAGGAAACCAGTGATCC...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTTTGTTCTTCTAAATaGTCTTCTGTCGTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLFCSSK*SSVVVR
Trigger: TCTGACAACGACAGAAGAGCATTTAGAAGAACAAAA...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTCAACAAAAGGGAGAGTaGAACTTTCAGGTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPQQKGE*NFQVLN
Trigger: ATTCAAGACCTGAAAGTTGCACTCTCCCTTTTGTTG...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTCTGAAACTGGCGAATTaGAGACATGGACATATCTTT +
Preference number: 4 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPLKLAN*RHGHIF
Trigger: AAAGATATGTCCATGTCTGCAATTCGCCAGTTTCAG...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTACCCTCTCACCAATTTaGTTGGTGATTCTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSTLSPI*LVILQA
Trigger: TGCTTGAAGAATCACCAAGCAAATTGGTGAGAGGGT...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTGGCTCCGAGTGCATTTaGACCAGATGTAATCTGGGT +
Preference number: 4 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQAGSECI*TRCNLG
Trigger: ACCCAGATTACATCTGGTGCAAATGCACTCGGAGCC...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAAAGGAGGTACTCCACATaGTTCAAGGGAATTGATCTT +
Preference number: 4 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKRRYST*FKGIDL
Trigger: AAGATCAATTCCCTTGAAGCATGTGGAGTACCTCCT...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GAGGTAACAAAGCCACGGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTGCTGCAGCACCTCCTaGTATAATCTTCGTAATAAA +
Preference number: 4 (lower is better)
Translates to: EVTKPRFTFFGHEPSIFHCCSTS*YNLRNK
Trigger: TTTATTACGAAGATTATACCAGGAGGTGCTGCAGCA...GTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACCGTGGCTTTGTTACCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp GTATATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTATCCACCGCTTTACTGTaGGAAACCTCTGACACATCA +
Preference number: 4 (lower is better)
Translates to: VYETDIRDSQQEGFRAQVSTALL*ETSDTS
Trigger: TGATGTGTCAGAGGTTTCCCACAGTAAAGCGGTGGA...TACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTGTGAGTAATATCAGGTaGACCATAAGGATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFVSNIR*TIRISH
Trigger: ATGACTGATCCTTATGGTCCACCTGATATTACTCAC...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTTATGTTGGGAATGACTaGTCATCTCAGAGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSYVGND*SSQSQV
Trigger: TACCTGACTCTGAGATGACCAGTCATTCCCAACATA...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTGTAGGTCATGGATTTTaGCCTCAAATCGAGCGTAAT +
Preference number: 4 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEIVGHGF*PQIERN
Trigger: ATTACGCTCGATTTGAGGCCAAAATCCATGACCTAC...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAACTAAGTCCTTGACTTaGCAGCCCACTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKTKSLT*QPTVLA
Trigger: AGCAAGGACAGTGGGCTGCCAAGTCAAGGACTTAGT...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCCCTCTGTTTCCTTCATaGCTTCATACAGTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFPLFPS*LHTVCV
Trigger: AACACAAACTGTATGAAGCCATGAAGGAAACAGAGG...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGAGGTTCGAGTGCTaGCAATTTTTCTTTAAAGCA +
Preference number: 4 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTMRFEC*QFFFKA
Trigger: TGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCAT...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAAAGCTAATCCCAGGTaGAATCCCCTCCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKKANPR*NPLLSV
Trigger: CACTGACAGGAGGGGATTCCACCTGGGATTAGCTTT...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTCCATCCACTCTAAAGTaGGAAACCAACTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSPSTLK*ETNSSS
Trigger: ACTAGAAGAGTTGGTTTCCCACTTTAGAGTGGATGG...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTAGCAACACTAGTAAATaGAAAGCACATCACACGACC +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSSNTSK*KAHHTT
Trigger: GGTCGTGTGATGTGCTTTCCATTTACTAGTGTTGCT...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGTACAAAACCAAGGGTTaGTGGTTCAATTTGATTGTA +
Preference number: 4 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGYKTKG*WFNLIV
Trigger: TACAATCAAATTGAACCACCAACCCTTGGTTTTGTA...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATAGCAAGCCTTCAGGTTaGAGAGAGCTCTGGACAAAG +
Preference number: 4 (lower is better)
Translates to: VINLGISLSPWLKYICRNSKPSG*RELWTK
Trigger: CTTTGTCCAGAGCTCTCTCCAACCTGAAGGCTTGCT...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTACCAGTTACACGATCTaGCACTTTTCTGAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVITSYTI*HFSERA
Trigger: GGCCCTTTCAGAAAAGTGCCAGATCGTGTAACTGGT...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAGGGCCTCTTACTTCGTaGGTTAGTCGAGGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKGPLTS*VSRGKE
Trigger: TTCCTTACCTCGACTAACCCACGAAGTAAGAGGCCC...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TGGTCAGTGGATTCGCATACAAGGTTTGTAGTTCTTATTTATGATGTGACAGACGAAAGTGCAGCTGCTTaGCTTTCACATCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: WSVDSHTRFVVLIYDVTDESAAA*LSHPPF
Trigger: AAAAGGTGGATGTGAAAGCCAAGCAGCTGCACTTTC...GTCTGTCACATCATAAATAAGAACTACAAACCTTGTATGCGAATCCACTGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR TCA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATCAATTTCTGTCCCATTaGCATAAGGAATTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHQFLSH*HKELCP
Trigger: TGGACACAATTCCTTATGTCAATGGGACAGAAATTG...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACAGTCCACCAGCCAGAATaGAGGACACAAAAATACCTT +
Preference number: 4 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTVHQPE*RTQKYL
Trigger: AAGGTATTTTTGTGTCCTTCATTCTGGCTGGTGGAC...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR TCA 90 bp GTATATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTAGTCCACCAGCCAGAATaGAGGACACAAAAATACCTT +
Preference number: 4 (lower is better)
Translates to: VYETDIRDSQQEGFRAQVVHQPE*RTQKYL
Trigger: AAGGTATTTTTGTGTCCTTCATTCTGGCTGGTGGAC...TACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR TCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACATATCAAGTCGTCATTaGTCCGATCCTTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNISSRH*SDPSWA
Trigger: GGCCCATGAAGGATCGGATCAATGACGACTTGATAT...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCCTTGATAGCATTTCCTaGTACATCAAGTATACAGTG +
Preference number: 4 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFLDSIS*YIKYTV
Trigger: CACTGTATACTTGATGTATCAGGAAATGCTATCAAG...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAATTGAGGGAATCCAGATaGAAGGCCCAGATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKLRESR*KAQIAL
Trigger: AAGAGCAATCTGGGCCTTTCATCTGGATTCCCTCAA...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTAAGGGATGTGCTGCATaGGAGTGTATCACTAATGTG +
Preference number: 4 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVIKGCAA*ECITNV
Trigger: CACATTAGTGATACACTCTCATGCAGCACATCCCTT...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTTTCCAAAAATATCCATaGGGGCAACTCATTAAGGGA +
Preference number: 4 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEIFQKYP*GQLIKG
Trigger: TCCCTTAATGAGTTGCCCTCATGGATATTTTTGGAA...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACGATGAAAGTAGGCCTTaGCCTGAAACTGGCGAATTG +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNDESRP*PETGEL
Trigger: CAATTCGCCAGTTTCAGGTCAAGGCCTACTTTCATC...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GTTTGCTATCAGAATAATTGGGGCCAGAGTCTGCCTTTATTGAAAGAAAATGTCGGTTGCATGCTCAGTTaGGAAACCAAAGAAGTTATC +
Preference number: 4 (lower is better)
Translates to: VCYQNNWGQSLPLLKENVGCMLS*ETKEVI
Trigger: GATAACTTCTTTGGTTTCTCAACTGAGCATGCAACC...GACATTTTCTTTCAATAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAAAGAGTCTGCCTTTATTaGAAGAAAATGTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKRVCLY*KKMSSE
Trigger: CTCTGAGGACATTTTCTTTCAATAAAGGCAGACTCT...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTAGAGTCTGCCTTTATTaGAAGAAAATGTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSRVCLY*KKMSSE
Trigger: CTCTGAGGACATTTTCTTTCAATAAAGGCAGACTCT...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCATGGCATGGCTTCAATaGGGAGGAAGAGGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: NLGISLSPWLKYICRNLGMAWLQ*GGRGLL
Trigger: TAGCAAACCTCTTCCTCCTCATTGAAGCCATGCCAT...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GACAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATGGATATTTACAGACTTaGGTGTGTGTGTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: DNTTNGGVNSIGKDPLTNGYLQT*VCVCVS
Trigger: GGAAACACACACACACACTCAAGTCTGTAAATATCC...ATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAAGGAGCGTCCTCATCTTaGTATCGATACTTAGTACAG +
Preference number: 4 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQGASSS*YRYLVQ
Trigger: CTGTACTAAGTATCGATATCAAGATGAGGACGCTCC...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR TCA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATGATCTCTGTTTTCTCTaGCTACAAAACGACATGTCT +
Preference number: 4 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHDLCFL*LQNDMS
Trigger: AGACATGTCGTTTTGTAGTCAGAGAAAACAGAGATC...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398309.6
CDS-3UTR TCA 90 bp GAGGTAACAAAGCCACGGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACCACGTTCTTTGGACATaGACCATCAATTTTTCACTA +
Preference number: 4 (lower is better)
Translates to: EVTKPRFTFFGHEPSIFHHVLWT*TINFSL
Trigger: TAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTG...GTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACCGTGGCTTTGTTACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR TCA 90 bp ACATCAAACTCCAGCCATTGGATTGTAGGGCTTTTAAGCTACCTAATGAGGGAATGTAGTTCTTATTTATaGTGTGACAGACCAGTGATC +
Preference number: 4 (lower is better)
Translates to: TSNSSHWIVGLLSYLMRECSSYL*CDRPVI
Trigger: GATCACTGGTCTGTCACATCATAAATAAGAACTACA...TTCCCTCATTAGGTAGCTTAAAAGCCCTACAATCCAATGGCTGGAGTTTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR TCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAAGGAGCGTCCTCATCTTaGTATCGATACTTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQGASSS*YRYFLH
Trigger: ATGCAAGAAGTATCGATATCAAGATGAGGACGCTCC...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR GCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTGGTATGCATTCATACTaGACTGATGCCTACTCTTTC +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILGMHSY*TDAYSF
Trigger: GAAAGAGTAGGCATCAGTGCAGTATGAATGCATACC...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR GCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTCTAAAGTGCCATTGTTaGCAGAGAGTAGATGGTTTT +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSLKCHC*QRVDGF
Trigger: AAAACCATCTACTCTCTGGCAACAATGGCACTTTAG...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTACAAATCTCACAGACTaGACACTGGTTCCATATAAA +
Preference number: 4 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFTNLTD*TLVPYK
Trigger: TTTATATGGAACCAGTGTGCAGTCTGTGAGATTTGT...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTGTGTTTGCCTCTTTCTaGTACAAATCTCACAGACTG +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILVFASF*YKSHRL
Trigger: CAGTCTGTGAGATTTGTAGCAGAAAGAGGCAAACAC...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TCCTTGTATATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACGTGTTTGCCTCTTTCTaGTACAAATCTCACAGACTG +
Preference number: 4 (lower is better)
Translates to: SLYMKQILGILNRKVLGHVFASF*YKSHRL
Trigger: CAGTCTGTGAGATTTGTAGCAGAAAGAGGCAAACAC...GTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATATACAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCCTGATGAGGTTCGAGTaGTGGCAATTTTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFLMRFE*WQFFFK
Trigger: TTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAG...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTCAACAAAAGGGAGAGTaGAACTTTCAGGTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSQQKGE*NFQVLN
Trigger: ATTCAAGACCTGAAAGTTGCACTCTCCCTTTTGTTG...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAAAGTTATTCAACTATTTaGATGGCAGGCTCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKSYSTI*MAGSGY
Trigger: ATAACCTGAGCCTGCCATGCAAATAGTTGAATAACT...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCAGGACTATGGGAAGATaGATAATTTTGCATTTCTGT +
Preference number: 4 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFRTMGR*IILHFC
Trigger: ACAGAAATGCAAAATTATGCATCTTCCCATAGTCCT...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAAGTGTCATTAGTCCAGTaGATGGACTTGCTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQVSLVQ*MDLLSE
Trigger: TTCAGACAGCAAGTCCATGCACTGGACTAATGACAC...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTGAGGAGGAAGAGGTTTaGTATCAGAATAATTGGGGC +
Preference number: 4 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVIEEEEV*YQNNWG
Trigger: GCCCCAATTATTCTGATAGCAAACCTCTTCCTCCTC...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAAGAGAGAAGAAAAGTCTaGCATCCCATTGGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQERRKV*HPIGSQ
Trigger: TTGACTCCCAATGGGATGGCAGACTTTTCTTCTCTC...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp AGCAGAGGGATACTCCTTGTATATGAAACAGATATTAGGGATTCTCAACAGGAAACTGGCCGGAATAAATaGATGTTGCATAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: SRGILLVYETDIRDSQQETGRNK*MLHSLF
Trigger: GAACAAGCTATGCAACATGCATTTATTCCGGCCAGT...TTCCTGTTGAGAATCCCTAATATCTGTTTCATATACAAGGAGTATCCCTCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp GAGTGCATTTGCACCAGATGTAATCTGGGTAACTTTCATGCCATTTCCATACAAGCATTTTTCAACAGCTaGTCCTCTGGTTTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: ECICTRCNLGNFHAISIQAFFNS*SSGFLN
Trigger: ATTAAGGAAACCAGAGGAGCAGCTGTTGAAAAATGC...TTGTATGGAAATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376104.7
CDS-3UTR GCA 90 bp TCTGCAAGAACAGCACAGCAAATTAAAGAGATACCAAGCATTGAAGAGCAGCCAAGAAGAAACATGTTCTaGAAGAACAGCACAGCAAAT +
Preference number: 4 (lower is better)
Translates to: SARTAQQIKEIPSIEEQPRRNMF*KNSTAN
Trigger: ATTTGCTGTGCTGTTCTTGCAGAACATGTTTCTTCT...TGGCTGCTCTTCAATGCTTGGTATCTCTTTAATTTGCTGTGCTGTTCTTGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR CCA 90 bp ATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTACACCTGCTGCAGCACCTCCTaGTATAATCTTCGTAATAAA +
Preference number: 4 (lower is better)
Translates to: MKQILGILNRKVLGHKYTCCSTS*YNLRNK
Trigger: TTTATTACGAAGATTATACCAGGAGGTGCTGCAGCA...GGTGTACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAATCCACCGCTTTACTGTaGGAAACCTCTGACACATCA +
Preference number: 4 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKSTALL*ETSDTS
Trigger: TGATGTGTCAGAGGTTTCCCACAGTAAAGCGGTGGA...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAATCCACCGCTTTACTGTaGGAAACCTCTGACACATCA +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKSTALL*ETSDTS
Trigger: TGATGTGTCAGAGGTTTCCCACAGTAAAGCGGTGGA...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAAAAATTGTCATTGTACTaGCCGGCTTCTATAAACTTG +
Preference number: 4 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKKLSLY*PASINL
Trigger: CAAGTTTATAGAAGCCGGCCAGTACAATGACAATTT...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAATCACAGACTGCACACTaGTTCCATATAAATTGTCAT +
Preference number: 4 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKSQTAH*FHINCH
Trigger: ATGACAATTTATATGGAACCAGTGTGCAGTCTGTGA...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTATGAGGTTCGAGTGCTaGCAATTTTTCTTTAAAGCA +
Preference number: 4 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPMRFEC*QFFFKA
Trigger: TGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCAT...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTATGAGGTTCGAGTGCTaGCAATTTTTCTTTAAAGCA +
Preference number: 4 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFMRFEC*QFFFKA
Trigger: TGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCAT...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTCCATCCACTCTAAAGTaGGAAACCAACTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILPSTLK*ETNSSS
Trigger: ACTAGAAGAGTTGGTTTCCCACTTTAGAGTGGATGG...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTGAACCCAGAGTAGAGTaGTTATTATCACTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFEPRVE*LLSLKS
Trigger: ACTTTTCAGTGATAATAACCACTCTACTCTGGGTTC...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAATCCCTGCCAGGTCTaGATGTACCCCAGAAATAAG +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKNPCQV*MYPRNK
Trigger: CTTATTTCTGGGGTACATCCAGACCTGGCAGGGATT...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATAAAGAAGTTATCGTGGTaGCCTAAAAATAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFIKKLSW*PKNRAG
Trigger: CCCAGCTCTATTTTTAGGCCACCACGATAACTTCTT...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GAGTGCATTTGCACCAGATGTAATCTGGGTAACTTTCATGCCATTTCCATACAAGCACCAGATGTAATCTaGGTAACTTTCATGCCATTT +
Preference number: 4 (lower is better)
Translates to: ECICTRCNLGNFHAISIQAPDVI*VTFMPF
Trigger: AAATGGCATGAAAGTTACCCAGATTACATCTGGTGC...TTGTATGGAAATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTTGCTATCAGAATAATTaGGGCCAGAGTCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILCYQNN*GQSLPL
Trigger: TAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCA...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATCTAACGGGTACAGCCTaGTGCACTCAGAAGTTAAGA +
Preference number: 4 (lower is better)
Translates to: VINLGISLSPWLKYICRNLTGTA*CTQKLR
Trigger: TCTTAACTTCTGAGTGCACCAGGCTGTACCCGTTAG...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAAGCATTCATACTGCACTaGTGCCTACTCTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKAFILH*CLLFPL
Trigger: CAAAGGAAAGAGTAGGCATCAGTGCAGTATGAATGC...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR TCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTCAATTTCTGTCCCATTaGCATAAGGAATTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILQFLSH*HKELCP
Trigger: TGGACACAATTCCTTATGTCAATGGGACAGAAATTG...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTGTCCACCAGCCAGAATaGAGGACACAAAAATACCTT +
Preference number: 4 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQAVHQPE*RTQKYL
Trigger: AAGGTATTTTTGTGTCCTTCATTCTGGCTGGTGGAC...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACGCTCATAGGAAAGAATaGGGTCTTCTTGTCCTCGTT +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNAHRKE*GLLVLV
Trigger: AACGAGGACAAGAAGACCTCATTCTTTCCTATGAGC...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTGATAGCATTTCCTaGTACATCAAGTATACAGTG +
Preference number: 4 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEILDSIS*YIKYTV
Trigger: CACTGTATACTTGATGTATCAGGAAATGCTATCAAG...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTCTTGATAGCATTTCCTaGTACATCAAGTATACAGTG +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSLDSIS*YIKYTV
Trigger: CACTGTATACTTGATGTATCAGGAAATGCTATCAAG...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GACAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATAATTGTCTTTCCTTGTaGCTCTATCTCTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: DNTTNGGVNSIGKDPLTNNCLSL*LYLFAL
Trigger: CAGAGCAAAGAGATAGAGTCACAAGGAAAGACAATT...ATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTATGTTTAGCGTAAGATaGACAATGCCTGTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEIMFSVR*TMPVFG
Trigger: TCCAAAAACAGGCATTGTTCATCTTACGCTAAACAT...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAAATGTTTAGCGTAAGATaGACAATGCCTGTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKMFSVR*TMPVFG
Trigger: TCCAAAAACAGGCATTGTTCATCTTACGCTAAACAT...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATATGTTTAGCGTAAGATaGACAATGCCTGTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHMFSVR*TMPVFG
Trigger: TCCAAAAACAGGCATTGTTCATCTTACGCTAAACAT...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCAGCTCTGAAGATTTTTaGAGTCTGTCATGGCACGGA +
Preference number: 4 (lower is better)
Translates to: NLGISLSPWLKYICRNLGSSEDF*SLSWHG
Trigger: TCCGTGCCATGACAGACTTCAAAAATCTTCAGAGCT...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376104.7
CDS-3UTR TCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACAGAGAGGTTCTTTTCTaGTACATGCACGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNREVLF*YMHEFW
Trigger: CCAGAACTCGTGCATGTATCAGAAAAGAACCTCTCT...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAGAGAGGTTCTTTTCTaGTACATGCACGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKREVLF*YMHEFW
Trigger: CCAGAACTCGTGCATGTATCAGAAAAGAACCTCTCT...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp GACAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTTCAGAGGAGAAATATaGGACTGCAAGACATATCCA +
Preference number: 4 (lower is better)
Translates to: DNTTNGGVNSIGKDPLTNFRGEI*DCKTYP
Trigger: TGGATATGTCTTGCAGTCTCATATTTCTCCTCTGAA...ATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000398309.6
CDS-3UTR TCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTTTCAGAGGAGAAATATaGGACTGCAAGACATATCCA +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILFRGEI*DCKTYP
Trigger: TGGATATGTCTTGCAGTCTCATATTTCTCCTCTGAA...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACAAGTATCTTTGACAGCTaGTATAAGCAGTGCATCGTG +
Preference number: 4 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTSIFDS*YKQCIV
Trigger: CACGATGCACTGCTTATAGCAGCTGTCAAAGATACT...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAATTCAGGTTGATATTGTaGTATAATCGTCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKFRLIL*YNRHCL
Trigger: CAGACAGTGACGATTATAGCACAATATCAACCTGAA...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATCTGTGGTTCATCATCTaGTCTCGTAGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: VINLGISLSPWLKYICRNLWFII*SRRSWI
Trigger: AATCCATGACCTACGAGAGCAGATGATGAACCACAG...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp TACATCAAAATGGGTGAAGCAGAGGGATACTCCTTGTATATGAAACAGATATTACTGTGGTTCATCATCTaGTCTCGTAGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: YIKMGEAEGYSLYMKQILLWFII*SRRSWI
Trigger: AATCCATGACCTACGAGAGCAGATGATGAACCACAG...TAATATCTGTTTCATATACAAGGAGTATCCCTCTGCTTCACCCATTTTGATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTCTGATGAGGTTCGAGTaGTGGCAATTTTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSLMRFE*WQFFFK
Trigger: TTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAG...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GTTTGCTATCAGAATAATTGGGGCCAGAGTCTGCCTTTATTGAAAGAAAATGTCCAACAAAAGGGAGAGTaGAACTTTCAGGTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: VCYQNNWGQSLPLLKENVQQKGE*NFQVLN
Trigger: ATTCAAGACCTGAAAGTTGCACTCTCCCTTTTGTTG...GACATTTTCTTTCAATAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCAGGACTATGGGAAGATaGATAATTTTGCATTTCTGT +
Preference number: 4 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFRTMGR*IILHFC
Trigger: ACAGAAATGCAAAATTATGCATCTTCCCATAGTCCT...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GTTTGCTATCAGAATAATTGGGGCCAGAGTCTGCCTTTATTGAAAGAAAATGTCCTGAAACTGGCGAATTaGAGACATGGACATATCTTT +
Preference number: 4 (lower is better)
Translates to: VCYQNNWGQSLPLLKENVLKLAN*RHGHIF
Trigger: AAAGATATGTCCATGTCTGCAATTCGCCAGTTTCAG...GACATTTTCTTTCAATAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTTTCTTTTCTGATACATaGACGAGTTCTGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVIFFSDT*TSSGPL
Trigger: AAGAGGCCCAGAACTCGTGCATGTATCAGAAAAGAA...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GACAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTGCTGCAGCACCTCCTaGTATAATCTTCGTAATAAA +
Preference number: 4 (lower is better)
Translates to: DNTTNGGVNSIGKDPLTNCCSTS*YNLRNK
Trigger: TTTATTACGAAGATTATACCAGGAGGTGCTGCAGCA...ATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CCA 90 bp TCCTTGTATATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACGTGAGTAATATCAGGTaGACCATAAGGATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: SLYMKQILGILNRKVLGHVSNIR*TIRISH
Trigger: ATGACTGATCCTTATGGTCCACCTGATATTACTCAC...GTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATATACAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTTTGCCAGAGAGTAGATaGTTTTCCATTGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVILPESR*FSIGGE
Trigger: TTCTCCACCAATGGAAAACCATCTACTCTCTGGCAA...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TACATCAAAATGGGTGAAGCAGAGGGATACTCCTTGTATATGAAACAGATATTATGCTCTCGTAGGTCATaGATTTTGGCCTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: YIKMGEAEGYSLYMKQILCSRRS*ILASNR
Trigger: TCGATTTGAGGCCAAAATCCATGACCTACGAGAGCA...TAATATCTGTTTCATATACAAGGAGTATCCCTCTGCTTCACCCATTTTGATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTTCACAGACTGCACACTaGTTCCATATAAATTGTCAT +
Preference number: 4 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEISQTAH*FHINCH
Trigger: ATGACAATTTATATGGAACCAGTGTGCAGTCTGTGA...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACGTTCATCCCTACACCTaGCACTTTGAGCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNVHPYT*HFEQTK
Trigger: TTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAAC...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATGAACCCAGAGTAGAGTaGTTATTATCACTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHEPRVE*LLSLKS
Trigger: ACTTTTCAGTGATAATAACCACTCTACTCTGGGTTC...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACAGCTGGGATCAGGAATaGCATTCTGGTGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNSWDQE*HSGVRK
Trigger: TTTTCTGACACCAGAATGCCATTCCTGATCCCAGCT...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTAGACAACACAACAAATaGAGGTGTAAATTCTATTGG +
Preference number: 4 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPRQHNK*RCKFYW
Trigger: CCAATAGAATTTACACCTCCATTTGTTGTGTTGTCT...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTGCACCAGATGTAATCTaGGTAACTTTCATGCCATTT +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILAPDVI*VTFMPF
Trigger: AAATGGCATGAAAGTTACCCAGATTACATCTGGTGC...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAGGTTGGAGAGAGCTCTaGACAAAGTTTGCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKGWREL*TKFAVL
Trigger: TAACACTGCAAACTTTGTCCAGAGCTCTCTCCAACC...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTTTGGTAAAAAGCCAGTaGCTTGCTGCAATCCAGAGT +
Preference number: 4 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQALVKSQ*LAAIQS
Trigger: ACTCTGGATTGCAGCAAGCCACTGGCTTTTTACCAA...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR TCA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACACAATTTCTGTCCCATTaGCATAAGGAATTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTQFLSH*HKELCP
Trigger: TGGACACAATTCCTTATGTCAATGGGACAGAAATTG...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR TCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAAAATTGTCTTTCCTTGTaGCTCTATCTCTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQNCLSL*LYLFAL
Trigger: CAGAGCAAAGAGATAGAGTCACAAGGAAAGACAATT...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTATGTTTAGCGTAAGATaGACAATGCCTGTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILMFSVR*TMPVFG
Trigger: TCCAAAAACAGGCATTGTTCATCTTACGCTAAACAT...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTGGATATTTACAGACTTaGGTGTGTGTGTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQAGYLQT*VCVCVS
Trigger: GGAAACACACACACACACTCAAGTCTGTAAATATCC...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACGGATATTTACAGACTTaGGTGTGTGTGTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNGYLQT*VCVCVS
Trigger: GGAAACACACACACACACTCAAGTCTGTAAATATCC...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp TTTTACATCAAAATGGGTGAAGCAGAGGGATACTCCTTGTATATGAAACAGATATTACATCAAAATGGGTaGAGCAGAGGGATACTCCTT +
Preference number: 4 (lower is better)
Translates to: FYIKMGEAEGYSLYMKQILHQNG*SRGILL
Trigger: AAGGAGTATCCCTCTGCTTCACCCATTTTGATGTAA...TATCTGTTTCATATACAAGGAGTATCCCTCTGCTTCACCCATTTTGATGTAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAATTGCTTGGTGAGGTATaGATTCATACTGCACTGATG +
Preference number: 4 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKLLGEV*IHTALM
Trigger: CATCAGTGCAGTATGAATGCATACCTCACCAAGCAA...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACACTAAAGTGCCATTGTTaGCAGAGAGTAGATGGTTTT +
Preference number: 4 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTLKCHC*QRVDGF
Trigger: AAAACCATCTACTCTCTGGCAACAATGGCACTTTAG...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATAACAAATCTCACAGACTaGACACTGGTTCCATATAAA +
Preference number: 4 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFITNLTD*TLVPYK
Trigger: TTTATATGGAACCAGTGTGCAGTCTGTGAGATTTGT...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp AGCAGAGGGATACTCCTTGTATATGAAACAGATATTAGGGATTCTCAACAGGAAACAAATCTCACAGACTaGACACTGGTTCCATATAAA +
Preference number: 4 (lower is better)
Translates to: SRGILLVYETDIRDSQQETNLTD*TLVPYK
Trigger: TTTATATGGAACCAGTGTGCAGTCTGTGAGATTTGT...TTCCTGTTGAGAATCCCTAATATCTGTTTCATATACAAGGAGTATCCCTCTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTACAAATCTCACAGACTaGACACTGGTTCCATATAAA +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILTNLTD*TLVPYK
Trigger: TTTATATGGAACCAGTGTGCAGTCTGTGAGATTTGT...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCGTGTTTGCCTCTTTCTaGTACAAATCTCACAGACTG +
Preference number: 4 (lower is better)
Translates to: NLGISLSPWLKYICRNLGVFASF*YKSHRL
Trigger: CAGTCTGTGAGATTTGTAGCAGAAAGAGGCAAACAC...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp CAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTTATGAAAGGCCCAGATTaGTCTTCAATAACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: QHNKWRCKFYWKRPSHQFMKGPD*SSITSL
Trigger: CAAGCTTGTTATTGAAGAGCAATCTGGGCCTTTCAT...AAATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAAAGGACTATGGGAAGATaGATAATTTTGCATTTCTGT +
Preference number: 4 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKRTMGR*IILHFC
Trigger: ACAGAAATGCAAAATTATGCATCTTCCCATAGTCCT...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTAGGACTATGGGAAGATaGATAATTTTGCATTTCTGT +
Preference number: 4 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSRTMGR*IILHFC
Trigger: ACAGAAATGCAAAATTATGCATCTTCCCATAGTCCT...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTCTTTTCTGATACATaGACGAGTTCTGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: VINLGISLSPWLKYICRNFFSDT*TSSGPL
Trigger: AAGAGGCCCAGAACTCGTGCATGTATCAGAAAAGAA...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000398309.6
CDS-3UTR GCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACTTCTTTTCTGATACATaGACGAGTTCTGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNFFSDT*TSSGPL
Trigger: AAGAGGCCCAGAACTCGTGCATGTATCAGAAAAGAA...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAATATGTTGGGAATGACTaGTCATCTCAGAGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKYVGND*SSQSQV
Trigger: TACCTGACTCTGAGATGACCAGTCATTCCCAACATA...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACTATGTTGGGAATGACTaGTCATCTCAGAGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNYVGND*SSQSQV
Trigger: TACCTGACTCTGAGATGACCAGTCATTCCCAACATA...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAGTAGGTCATGGATTTTaGCCTCAAATCGAGCGTAAT +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKVGHGF*PQIERN
Trigger: ATTACGCTCGATTTGAGGCCAAAATCCATGACCTAC...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTACACCGAGGCATTGATAACGTaGAGAATATCTCCATATTTA +
Preference number: 4 (lower is better)
Translates to: MKQILGILNRKVLGHKYTEALIT*RISPYL
Trigger: TAAATATGGAGATATTCTCCACGTTATCAATGCCTC...GGTGTACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTGAGGCATTGATAACGTaGAGAATATCTCCATATTTA +
Preference number: 4 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEIEALIT*RISPYL
Trigger: TAAATATGGAGATATTCTCCACGTTATCAATGCCTC...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAACCTCTGTTTCCTTCATaGCTTCATACAGTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQPLFPS*LHTVCV
Trigger: AACACAAACTGTATGAAGCCATGAAGGAAACAGAGG...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTATGAGGTTCGAGTGCTaGCAATTTTTCTTTAAAGCA +
Preference number: 4 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILMRFEC*QFFFKA
Trigger: TGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCAT...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATAAGAAGTTATCGTGGTaGCCTAAAAATAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VINLGISLSPWLKYICRNKKLSW*PKNRAG
Trigger: CCCAGCTCTATTTTTAGGCCACCACGATAACTTCTT...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTTACAAAACCAAGGGTTaGTGGTTCAATTTGATTGTA +
Preference number: 4 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEIYKTKG*WFNLIV
Trigger: TACAATCAAATTGAACCACCAACCCTTGGTTTTGTA...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCTTCCAAAAATATCCATaGGGGCAACTCATTAAGGGA +
Preference number: 4 (lower is better)
Translates to: NLGISLSPWLKYICRNLGFQKYP*GQLIKG
Trigger: TCCCTTAATGAGTTGCCCTCATGGATATTTTTGGAA...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACAATTGTCTTTCCTTGTaGCTCTATCTCTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNNCLSL*LYLFAL
Trigger: CAGAGCAAAGAGATAGAGTCACAAGGAAAGACAATT...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCAGTGGTTATTATCACTaGAAAGTCTCTCCCCAAACA +
Preference number: 4 (lower is better)
Translates to: NLGISLSPWLKYICRNLGSGYYH*KVSPQT
Trigger: TGTTTGGGGAGAGACTTTTCAGTGATAATAACCACT...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACCATTGTACCAGAGCATaGAAAATAGCACCAGTTACA +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNHCTRA*KIAPVT
Trigger: TGTAACTGGTGCTATTTTTCATGCTCTGGTACAATG...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAACCTTCCATCTTTTTGTaGAGCTCCTCCATCTATAAT +
Preference number: 4 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKPSIFL*SSSIYN
Trigger: ATTATAGATGGAGGAGCTGCACAAAAAGATGGAAGG...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCCCTTCCATCTTTTTGTaGAGCTCCTCCATCTATAAT +
Preference number: 4 (lower is better)
Translates to: NLGISLSPWLKYICRNLGPSIFL*SSSIYN
Trigger: ATTATAGATGGAGGAGCTGCACAAAAAGATGGAAGG...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR GCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAACCTTCCATCTTTTTGTaGAGCTCCTCCATCTATAAT +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKPSIFL*SSSIYN
Trigger: ATTATAGATGGAGGAGCTGCACAAAAAGATGGAAGG...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAACTAAAGTGCCATTGTTaGCAGAGAGTAGATGGTTTT +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKLKCHC*QRVDGF
Trigger: AAAACCATCTACTCTCTGGCAACAATGGCACTTTAG...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp TTTTACATCAAAATGGGTGAAGCAGAGGGATACTCCTTGTATATGAAACAGATACTAAAGTGCCATTGTTaGCAGAGAGTAGATGGTTTT +
Preference number: 4 (lower is better)
Translates to: FYIKMGEAEGYSLYMKQILKCHC*QRVDGF
Trigger: AAAACCATCTACTCTCTGGCAACAATGGCACTTTAG...TATCTGTTTCATATACAAGGAGTATCCCTCTGCTTCACCCATTTTGATGTAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACATTCAGGTTGATATTGTaGTATAATCGTCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTFRLIL*YNRHCL
Trigger: CAGACAGTGACGATTATAGCACAATATCAACCTGAA...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAATTCAGGTTGATATTGTaGTATAATCGTCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQFRLIL*YNRHCL
Trigger: CAGACAGTGACGATTATAGCACAATATCAACCTGAA...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACATGAAAGGCCCAGATTaGTCTTCAATAACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNMKGPD*SSITSL
Trigger: CAAGCTTGTTATTGAAGAGCAATCTGGGCCTTTCAT...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR GCA 90 bp CAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTTCTGATGAGGTTCGAGTaGTGGCAATTTTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: QHNKWRCKFYWKRPSHQFLMRFE*WQFFFK
Trigger: TTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAG...AAATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACAATAGGCCTTTCTAACTaGTTGATATTTTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTIGLSN*LIFSWK
Trigger: CTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTAT...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCTGCTGCAGCACCTCCTaGTATAATCTTCGTAATAAA +
Preference number: 4 (lower is better)
Translates to: NLGISLSPWLKYICRNLGCCSTS*YNLRNK
Trigger: TTTATTACGAAGATTATACCAGGAGGTGCTGCAGCA...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CCA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTGTGAGTAATATCAGGTaGACCATAAGGATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQAVSNIR*TIRISH
Trigger: ATGACTGATCCTTATGGTCCACCTGATATTACTCAC...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAAGTGAGTAATATCAGGTaGACCATAAGGATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKVSNIR*TIRISH
Trigger: ATGACTGATCCTTATGGTCCACCTGATATTACTCAC...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAGTGAGTAATATCAGGTaGACCATAAGGATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKVSNIR*TIRISH
Trigger: ATGACTGATCCTTATGGTCCACCTGATATTACTCAC...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp GTATATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTATCACAGACTGCACACTaGTTCCATATAAATTGTCAT +
Preference number: 4 (lower is better)
Translates to: VYETDIRDSQQEGFRAQVSQTAH*FHINCH
Trigger: ATGACAATTTATATGGAACCAGTGTGCAGTCTGTGA...TACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CCA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCGATCATAGGTTTTCTTaGCTTGTTCCTCTGTTAGAC +
Preference number: 4 (lower is better)
Translates to: NLGISLSPWLKYICRNLGDHRFS*LVPLLD
Trigger: GTCTAACAGAGGAACAAGCCAAGAAAACCTATGATC...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACGATCATAGGTTTTCTTaGCTTGTTCCTCTGTTAGAC +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNDHRFS*LVPLLD
Trigger: GTCTAACAGAGGAACAAGCCAAGAAAACCTATGATC...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAGATCATAGGTTTTCTTaGCTTGTTCCTCTGTTAGAC +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKDHRFS*LVPLLD
Trigger: GTCTAACAGAGGAACAAGCCAAGAAAACCTATGATC...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTGATCATAGGTTTTCTTaGCTTGTTCCTCTGTTAGAC +
Preference number: 4 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQADHRFS*LVPLLD
Trigger: GTCTAACAGAGGAACAAGCCAAGAAAACCTATGATC...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAAGAACCCAGAGTAGAGTaGTTATTATCACTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQEPRVE*LLSLKS
Trigger: ACTTTTCAGTGATAATAACCACTCTACTCTGGGTTC...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTAATACACCAGTTCATTaGAGCCATAGAGACATCAAC +
Preference number: 4 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQANTPVH*SHRDIN
Trigger: GTTGATGTCTCTATGGCTCCAATGAACTGGTGTATT...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GTTTGCTATCAGAATAATTGGGGCCAGAGTCTGCCTTTATTGAAAGAAAATGTCATATCTAGCAAAGCTTaGAATAAGCTGCTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: VCYQNNWGQSLPLLKENVISSKA*NKLLLK
Trigger: CTTTAAGAGCAGCTTATTCCAAGCTTTGCTAGATAT...GACATTTTCTTTCAATAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376104.7
CDS-3UTR CCA 90 bp TTTTACATCAAAATGGGTGAAGCAGAGGGATACTCCTTGTATATGAAACAGATAGGTTTTACATCAAAATaGGTGAAGCAGAGGGATACT +
Preference number: 4 (lower is better)
Translates to: FYIKMGEAEGYSLYMKQIGFTSK*VKQRDT
Trigger: AGTATCCCTCTGCTTCACCCATTTTGATGTAAAACC...TATCTGTTTCATATACAAGGAGTATCCCTCTGCTTCACCCATTTTGATGTAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR TCA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATCTTGATAGCATTTCCTaGTACATCAAGTATACAGTG +
Preference number: 4 (lower is better)
Translates to: VINLGISLSPWLKYICRNLDSIS*YIKYTV
Trigger: CACTGTATACTTGATGTATCAGGAAATGCTATCAAG...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR TCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACCTTGATAGCATTTCCTaGTACATCAAGTATACAGTG +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNLDSIS*YIKYTV
Trigger: CACTGTATACTTGATGTATCAGGAAATGCTATCAAG...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCTTGATAGCATTTCCTaGTACATCAAGTATACAGTG +
Preference number: 4 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQALDSIS*YIKYTV
Trigger: CACTGTATACTTGATGTATCAGGAAATGCTATCAAG...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR TCA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAAAGAACATTATTAGTTTaGGTTCTGACTGACCTTCAG +
Preference number: 4 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKRTLLV*VLTDLQ
Trigger: CTGAAGGTCAGTCAGAACTCAAACTAATAATGTTCT...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR TCA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAAGCCTTTCTAACTGCTTaGTATTTTCCTGGAAGATTA +
Preference number: 4 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKAFLTA*YFPGRL
Trigger: TAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGC...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR GCA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATAGTTATTCAACTATTTaGATGGCAGGCTCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: VINLGISLSPWLKYICRNSYSTI*MAGSGY
Trigger: ATAACCTGAGCCTGCCATGCAAATAGTTGAATAACT...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GTATATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTAGGAATAAATGCATGTTaGATAGCTTGTTCACATTGT +
Preference number: 4 (lower is better)
Translates to: VYETDIRDSQQEGFRAQVGINAC*IACSHC
Trigger: ACAATGTGAACAAGCTATGCAACATGCATTTATTCC...TACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR GCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAGAGTGCACAGTAACATaGAAAGAACATTGCAGTAAA +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKECTVT*KEHCSK
Trigger: TTTACTGCAATGTTCTTTGCATGTTACTGTGCACTC...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398309.6
ENST00000524982.5
CDS-3UTR GCA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTGATATCGATACTTCTTaGATCCAAACATCAACGATA +
Preference number: 4 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVIDIDTS*IQTSTI
Trigger: TATCGTTGATGTTTGGATGCAAGAAGTATCGATATC...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR CCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAAATTGTCATTGTACTaGCCGGCTTCTATAAACTTG +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKKLSLY*PASINL
Trigger: CAAGTTTATAGAAGCCGGCCAGTACAATGACAATTT...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAATCACAGACTGCACACTaGTTCCATATAAATTGTCAT +
Preference number: 4 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKSQTAH*FHINCH
Trigger: ATGACAATTTATATGGAACCAGTGTGCAGTCTGTGA...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAAATTAGCCTGAGTCCTTaGCTTAAATATATTTGTAGG +
Preference number: 4 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQISLSP*LKYICR
Trigger: CCTACAAATATATTTAAGCCAAGGACTCAGGCTAAT...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CAA 72 bp TTATATTACTACAAAACCAAGGGTTGGTGGTTCAATTaGATTGTACTTAGCCACAGCAACACTAGTAAATGG +
Preference number: 4 (lower is better)
Translates to: LYYYKTKGWWFN*IVLSHSNTSKW
Trigger: CCATTTACTAGTGTTGCTGTGGCTAAGTACAATCAAATTGAACCACCAACCCTTGGTTTTGTAGTAATATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
3UTR CAA 72 bp GGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTaGCTTGGTGATTCTTCAAGCAAATATATATGTATC +
Preference number: 4 (lower is better)
Translates to: GVNSIGKDPLTN*LGDSSSKYICI
Trigger: GATACATATATATTTGCTTGAAGAATCACCAAGCAAATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR GCA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTTTGTTCTTCTAAATaGTCTTCTGTCGTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: VINLGISLSPWLKYICRNFCSSK*SSVVVR
Trigger: TCTGACAACGACAGAAGAGCATTTAGAAGAACAAAA...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCGAGGCATTGATAACGTaGAGAATATCTCCATATTTA +
Preference number: 4 (lower is better)
Translates to: NLGISLSPWLKYICRNLGEALIT*RISPYL
Trigger: TAAATATGGAGATATTCTCCACGTTATCAATGCCTC...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CCA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACGAGGCATTGATAACGTaGAGAATATCTCCATATTTA +
Preference number: 4 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNEALIT*RISPYL
Trigger: TAAATATGGAGATATTCTCCACGTTATCAATGCCTC...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CCA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCATTAGCCTGAGTCCTTaGCTTAAATATATTTGTAGG +
Preference number: 4 (lower is better)
Translates to: NLGISLSPWLKYICRNLGISLSP*LKYICR
Trigger: CCTACAAATATATTTAAGCCAAGGACTCAGGCTAAT...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS GCA 90 bp TGGAGCGACAGCCTAGACCGAGCTGCCGCTTCGATCACTGCCCCCTaGACCCGCCGTGGCCATCCCGGAGCCCCGGTGGAAGCAACGCCG +
Preference number: 5 (lower is better)
Translates to: WSDSLDRAAASITAP*TRRGHPGAPVEATP
Trigger: CGGCGTTGCTTCCACCGGGGCTCCGGGATGGCCACGGCGGGTGCAGGGGGCAGTGATCGAAGCGGCAGCTCGGTCTAGGCTGTCGCTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS GCA 90 bp GGGCACATGGAGCGACAGCCTAGACCGAGCTGCCGCTTCGATCACTaGCCCCTGCACCCGCCGTGGCCATCCCGGAGCCCCGGTGGAAGC +
Preference number: 5 (lower is better)
Translates to: GHMERQPRPSCRFDH*PLHPPWPSRSPGGS
Trigger: GCTTCCACCGGGGCTCCGGGATGGCCACGGCGGGTGCAGGGGGCAGTGATCGAAGCGGCAGCTCGGTCTAGGCTGTCGCTCCATGTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS CCA 90 bp CCTAGACCGAGCTGCCGCTTCGATCACTGCCCCCTGCACCCGCCGTaGCCATCCCGGAGCCCCGGTGGAAGCAACGCCGCGGGCAAGTAC +
Preference number: 5 (lower is better)
Translates to: PRPSCRFDHCPLHPP*PSRSPGGSNAAGKY
Trigger: GTACTTGCCCGCGGCGTTGCTTCCACCGGGGCTCCGGGATGGCCACGGCGGGTGCAGGGGGCAGTGATCGAAGCGGCAGCTCGGTCTAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS GCA 90 bp AACGCTGTGCTCGCCGGGCACATGGAGCGACAGCCTAGACCGAGCTaGCGCTTCGATCACTGCCCCCTGCACCCGCCGTGGCCATCCCGG +
Preference number: 5 (lower is better)
Translates to: NAVLAGHMERQPRPS*RFDHCPLHPPWPSR
Trigger: CCGGGATGGCCACGGCGGGTGCAGGGGGCAGTGATCGAAGCGGCAGCTCGGTCTAGGCTGTCGCTCCATGTGCCCGGCGAGCACAGCGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS GCA 90 bp TTCCGGGCTGCGGCAGTGGCAGCTCGCTGGGGGACCCAAACGCTGTaGTCGCCGGGCACATGGAGCGACAGCCTAGACCGAGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: FRAAAVAARWGTQTL*SPGTWSDSLDRAAA
Trigger: AGCGGCAGCTCGGTCTAGGCTGTCGCTCCATGTGCCCGGCGAGCACAGCGTTTGGGTCCCCCAGCGAGCTGCCACTGCCGCAGCCCGGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS CCA 90 bp GTGGCAGCTCGCTGGGGGACCCAAACGCTGTGCTCGCCGGGCACATaGAGCGACAGCCTAGACCGAGCTGCCGCTTCGATCACTGCCCCC +
Preference number: 5 (lower is better)
Translates to: VAARWGTQTLCSPGT*SDSLDRAAASITAP
Trigger: GGGGGCAGTGATCGAAGCGGCAGCTCGGTCTAGGCTGTCGCTCCATGTGCCCGGCGAGCACAGCGTTTGGGTCCCCCAGCGAGCTGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS CCA 90 bp TCAGGGTCCTTAACAACAGGGGACATTCCTTCCGGGCTGCGGCAGTaGCAGCTCGCTGGGGGACCCAAACGCTGTGCTCGCCGGGCACAT +
Preference number: 5 (lower is better)
Translates to: SGSLTTGDIPSGLRQ*QLAGGPKRCARRAH
Trigger: ATGTGCCCGGCGAGCACAGCGTTTGGGTCCCCCAGCGAGCTGCCACTGCCGCAGCCCGGAAGGAATGTCCCCTGTTGTTAAGGACCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS GCA 90 bp GGACTGGCCTGTGCTGGGCTGAACCAACCATGTGGGCAGGTACAATaGTCCCCACAAGTCCCTTTGCCCTTGGTGCTCGTCTTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: GLACAGLNQPCGQVQ*SPQVPLPLVLVLWG
Trigger: CCCCCACAAGACGAGCACCAAGGGCAAAGGGACTTGTGGGGAGCATTGTACCTGCCCACATGGTTGGTTCAGCCCAGCACAGGCCAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280241.12
ENST00000398301.6
CDS-3UTR CAA 90 bp GGGTATCTCCTGCCCATGGTTTTGGGTAGGGCTGGTGGGAACCTGGGAGCTGGCCCCGTTGGAGAGTCATaGAAGGCTGACGAGTTGCGG +
Preference number: 5 (lower is better)
Translates to: GYLLPMVLGRAGGNLGAGPVGES*KADELR
Trigger: CCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGG...GCCAGCTCCCAGGTTCCCACCAGCCCTACCCAAAACCATGGGCAGGAGATACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS GCA 90 bp GCTGGAGCTGTCACTTGCAGGCTGTTGCTTTCTCAGTTCCTCTCATaGTGGTTAGCTGAGGGAGAGGGTGGGAGGAGGGAGGGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: AGAVTCRLLLSQFLS*WLAEGEGGRREGLG
Trigger: CCCCAACCCCTCCCTCCTCCCACCCTCTCCCTCAGCTAACCAGCATGAGAGGAACTGAGAAAGCAACAGCCTGCAAGTGACAGCTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527466.1
CDS CCA 90 bp GGAGCTGTCACTTGCAGGCTGTTGCTTTCTCAGTTCCTCTCATGCTaGTTAGCTGAGGGAGAGGGTGGGAGGAGGGAGGGGTTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: GAVTCRLLLSQFLSC*LAEGEGGRREGLGE
Trigger: CTCCCCCAACCCCTCCCTCCTCCCACCCTCTCCCTCAGCTAACCAGCATGAGAGGAACTGAGAAAGCAACAGCCTGCAAGTGACAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527466.1
CDS CCA 90 bp GGTGAGGCAGGCGCTGCCTTTGTAGCCAGCTCACACACATCCAGTTaGCTAAGTATTTGTCTGCAGTTCTTCGGCACCGGCACCGTCGCC +
Preference number: 5 (lower is better)
Translates to: GEAGAAFVASSHTSS*LSICLQFFGTGTVA
Trigger: GGCGACGGTGCCGGTGCCGAAGAACTGCAGACAAATACTTAGCCAACTGGATGTGTGTGAGCTGGCTACAAAGGCAGCGCCTGCCTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527466.1
CDS-3UTR CAA 90 bp GGAGGCGGGCTGGAGCAGGCTCCAGGTCAGGGCCTCACGCTCAGCTTTACTTTCAACCTTGCCACTTGGTaGTCTGTCCTCATGAGTTGC +
Preference number: 5 (lower is better)
Translates to: GGGLEQAPGQGLTLSFTFNLATW*SVLMSC
Trigger: GCAACTCATGAGGACAGACAACCAAGTGGCAAGGTT...GAAAGTAAAGCTGAGCGTGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS TCA 90 bp GCCAGTCTGCAGGTATATTTACATCCTGCCAGCAGGAGGTCCGGGTaGGGCAGGCGCTGCCTTTGTAGCCAGCTCACACACATCCAGTTG +
Preference number: 5 (lower is better)
Translates to: ASLQVYLHPASRRSG*GRRCLCSQLTHIQL
Trigger: CAACTGGATGTGTGTGAGCTGGCTACAAAGGCAGCGCCTGCCTCACCCGGACCTCCTGCTGGCAGGATGTAAATATACCTGCAGACTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527466.1
CDS GCA 90 bp CAGCAGTGGCACCTCCTCCTTGGCTCCTACTCTGCTGAACAGGCCTaGAGTGGTTCCAGCTTCCTGTGGTTGATTCTGGCCCTAAGTTCC +
Preference number: 5 (lower is better)
Translates to: QQWHLLLGSYSAEQA*SGSSFLWLILALSS
Trigger: GGAACTTAGGGCCAGAATCAACCACAGGAAGCTGGAACCACTGCAGGCCTGTTCAGCAGAGTAGGAGCCAAGGAGGAGGTGCCACTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530589.1
CDS-3UTR CAA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTCCCTTGGTGCTCGTCTaGTGGGGGCTTTTCCGCACA +
Preference number: 5 (lower is better)
Translates to: EEALISSLGQKARQRFIPPLVLV*WGLFRT
Trigger: TGTGCGGAAAAGCCCCCACAAGACGAGCACCAAGGG...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR CAA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTCAAGTCCCTTTGCCCTaGGTGCTCGTCTTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: EEALISSLGQKARQRFIPQVPLP*VLVLWG
Trigger: CCCCCACAAGACGAGCACCAAGGGCAAAGGGACTTG...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS TCA 90 bp CTTGCGAGGCTCTCCTTCCAGGGAGACGGCCCGTTGGAGAGTCATTaGAGGCTGACGAGTTGCGGTGCTATGTTGGGAATGACTGGTCAT +
Preference number: 5 (lower is better)
Translates to: LARLSFQGDGPLESH*RLTSCGAMLGMTGH
Trigger: ATGACCAGTCATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGGCCGTCTCCCTGGAAGGAGAGCCTCGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS TCA 90 bp CTTGCGAGGCTCTCCTTCCAGGGAGACGGCCCGTTGGAGAGTCATTaGAGGCTGACGAGTTGCGGTGCTATGTTGGGAATGACTGGTGTA +
Preference number: 5 (lower is better)
Translates to: LARLSFQGDGPLESH*RLTSCGAMLGMTGV
Trigger: TACACCAGTCATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGGCCGTCTCCCTGGAAGGAGAGCCTCGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418306.6
CDS GCA 90 bp TTCCACCGTGGATTCCTCAGTATCTTTGACAGCTGCTATAAGCAGTaGATCGTGGGAGCAGTGGGAGCAGCGACAGCAGCTCCGCACAGC +
Preference number: 5 (lower is better)
Translates to: FHRGFLSIFDSCYKQ*IVGAVGAATAAPHS
Trigger: GCTGTGCGGAGCTGCTGTCGCTGCTCCCACTGCTCCCACGATGCACTGCTTATAGCAGCTGTCAAAGATACTGAGGAATCCACGGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280241.12
ENST00000398301.6
CDS GCA 90 bp ATAATCGTCACTGTCTGTCCAGCCCCCTTTAGTGCAGCAGCTGCCTaGTCGTGGGATGCACCACGGAGGTCAATGCCATTCACCGATAGG +
Preference number: 5 (lower is better)
Translates to: IIVTVCPAPFSAAAA*SWDAPRRSMPFTDR
Trigger: CCTATCGGTGAATGGCATTGACCTCCGTGGTGCATCCCACGAGCAGGCAGCTGCTGCACTAAAGGGGGCTGGACAGACAGTGACGATTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS GCA 90 bp CCCTGCCCAAGCCCCGTTCTTTTAGGGAAGAGCACTGAAATGTCCTaGACCCTCCACGCGATGAAGTGTTTCCTCAGGCAGGAGCAACAG +
Preference number: 5 (lower is better)
Translates to: PCPSPVLLGKSTEMS*TLHAMKCFLRQEQQ
Trigger: CTGTTGCTCCTGCCTGAGGAAACACTTCATCGCGTGGAGGGTGCAGGACATTTCAGTGCTCTTCCCTAAAAGAACGGGGCTTGGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS CCA 90 bp GCTCCGGCAAAACTTCCCGGTGGCTTCCTGGGCTCCGTGGCTGCATaGTCTTTTAGCGGATTCCTTGATTGGAACAAGGCTCCTGTGAGT +
Preference number: 5 (lower is better)
Translates to: APAKLPGGFLGSVAA*SFSGFLDWNKAPVS
Trigger: ACTCACAGGAGCCTTGTTCCAATCAAGGAATCCGCTAAAAGACCATGCAGCCACGGAGCCCAGGAAGCCACCGGGAAGTTTTGCCGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527088.1
CDS-3UTR CAA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTCCCGTTGGAGAGTCATaGAAGGCTGACGAGTTGCGG +
Preference number: 5 (lower is better)
Translates to: EEALISSLGQKARQRFIPPVGES*KADELR
Trigger: CCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGG...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GGAGGCGGGCTGGAGCAGGCTCCAGGTCAGGGCCTCACGCTCAGCTTTACTTTCGTCTGTCCTCATGAGTaGCTAGGGAGATACTATACT +
Preference number: 5 (lower is better)
Translates to: GGGLEQAPGQGLTLSFTFVCPHE*LGRYYT
Trigger: AGTATAGTATCTCCCTAGCAACTCATGAGGACAGAC...GAAAGTAAAGCTGAGCGTGAGGCCCTGACCTGGAGCCTGCTCCAGCCCGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS TCA 90 bp CGGCATCCATCCCATCGGACCCCCGGCTGCAGCTGTGTTGCTTGGTaGGGTATGCATTCATACTGCACTGATGCCTACTCTTTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: RHPSHRTPGCSCVAW*GMHSYCTDAYSFLW
Trigger: CCAAAGGAAAGAGTAGGCATCAGTGCAGTATGAATGCATACCTCACCAAGCAACACAGCTGCAGCCGGGGGTCCGATGGGATGGATGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280241.12
ENST00000398301.6
CDS CCA 90 bp AATTATAGGAGCAGGACTGGCCTGTGCTGGGCTGAACCAACCATGTaGGCAGGTACAATGCTCCCCACAAGTCCCTTTGCCCTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: NYRSRTGLCWAEPTM*AGTMLPTSPFALGA
Trigger: AGCACCAAGGGCAAAGGGACTTGTGGGGAGCATTGTACCTGCCCACATGGTTGGTTCAGCCCAGCACAGGCCAGTCCTGCTCCTATAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280241.12
ENST00000398301.6
CDS-3UTR CAA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTCCCGTTGGAGAGTCATaGAAGGCTGACGAGTTGCGG +
Preference number: 5 (lower is better)
Translates to: ALISSLGQKARQRFIPTPPVGES*KADELR
Trigger: CCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGG...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTCTTTCCACCCTCCTTTaGCTGGGGATGACCCCCATC +
Preference number: 5 (lower is better)
Translates to: PITLMALSLALLPSLHAGLSTLL*LGMTPI
Trigger: GATGGGGGTCATCCCCAGCAAAAGGAGGGTGGAAAG...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCCTCTCATCTCATCTCTaGGGCAGAAAGCCCGTCAGA +
Preference number: 5 (lower is better)
Translates to: ERALDKVCSVSTSLAPGSLSSHL*GRKPVR
Trigger: TCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAG...GGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTTGTGTGAAGGTGACATaGCACCCCCAGCAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSCVKVT*HPQQAF
Trigger: GAAGGCTTGCTGGGGGTGCAATGTCACCTTCACACA...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCGTCTCGAGCCAGAGGTaGGAGAGTTCTTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSVSSQR*ESSFLA
Trigger: AGCCAGGAAAGAACTCTCCAACCTCTGGCTCGAGAC...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS GCA 90 bp CATCCCATCGGACCCCCGGCTGCAGCTGTGTTGCTTGGTGAGGTATaGATTCATACTGCACTGATGCCTACTCTTTCCTTTGGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: HPIGPPAAAVLLGEV*IHTALMPTLSFGQL
Trigger: GAGCTGACCAAAGGAAAGAGTAGGCATCAGTGCAGTATGAATGCATACCTCACCAAGCAACACAGCTGCAGCCGGGGGTCCGATGGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280241.12
ENST00000398301.6
CDS GCA 90 bp CCACCTCGGCTCAGAGACGAACAGAATCAGGCTGGAGCTGTCACTTaGAGGCTGTTGCTTTCTCAGTTCCTCTCATGCTGGTTAGCTGAG +
Preference number: 5 (lower is better)
Translates to: PPRLRDEQNQAGAVT*RLLLSQFLSCWLAE
Trigger: CTCAGCTAACCAGCATGAGAGGAACTGAGAAAGCAACAGCCTGCAAGTGACAGCTCCAGCCTGATTCTGTTCGTCTCTGAGCCGAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527466.1
CDS CCA 90 bp AGAAATCAGCTCCGGCAAAACTTCCCGGTGGCTTCCTGGGCTCCGTaGCTGCATGGTCTTTTAGCGGATTCCTTGATTGGAACAAGGCTC +
Preference number: 5 (lower is better)
Translates to: RNQLRQNFPVASWAP*LHGLLADSLIGTRL
Trigger: GAGCCTTGTTCCAATCAAGGAATCCGCTAAAAGACCATGCAGCCACGGAGCCCAGGAAGCCACCGGGAAGTTTTGCCGGAGCTGATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527088.1
CDS-3UTR CAA 90 bp AGGGACACTGATGAAAGCTCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCGGGCCTTTGAACAGTTaGATTTCCACAACGGTCTCC +
Preference number: 5 (lower is better)
Translates to: RDTDESSWSWGRTPPSFFGPLNS*ISTTVS
Trigger: GGAGACCGTTGTGGAAATCAAACTGTTCAAAGGCCC...GAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGAGCTTTCATCAGTGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCGTCTCCAGGAATGTGTaGGTTCCCCACACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFVSRNV*VPHTSC
Trigger: GCAGGAGGTGTGGGGAACCAACACATTCCTGGAGAC...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCCCCGTTGGAGAGTCATaGAAGGCTGACGAGTTGCGG +
Preference number: 5 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFPVGES*KADELR
Trigger: CCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGG...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCTTGTGCAGGACTACCTaGCGAGGCTCTCCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFLCRTT*RGSPSR
Trigger: CCTGGAAGGAGAGCCTCGCAAGGTAGTCCTGCACAA...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCACCTACACCTGGCACTTaGAGCAAACCAAAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPPTPGT*SKPKPS
Trigger: GGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCCTACACCTGGCACTTaGAGCAAACCAAAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSPTPGT*SKPKPS
Trigger: GGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCCCTACACCTGGCACTTaGAGCAAACCAAAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: GSHLISWAESPSEVHPYTPTPGT*SKPKPS
Trigger: GGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTCTCTCATCTCATCTCTaGGGCAGAAAGCCCGTCAGA +
Preference number: 5 (lower is better)
Translates to: EEALISSLGQKARQRFIPLSSHL*GRKPVR
Trigger: TCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAG...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCACATTGGGAGTCAACCTaGCCACTTGGTTGTCTGTCC +
Preference number: 5 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPHWEST*PLGCLS
Trigger: GGACAGACAACCAAGTGGCAAGGTTGACTCCCAATG...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS GCA 90 bp ATAGGAGCAGGACTGGCCTTCTCTGATTTCGCCTTCCTGGCATTGTaGACGAACCTGCGACCCAGCTTCTTAGCATACCAGATAGAGGCA +
Preference number: 5 (lower is better)
Translates to: IGAGLAFSDFAFLAL*TNLRPSFLAYQIEA
Trigger: TGCCTCTATCTGGTATGCTAAGAAGCTGGGTCGCAGGTTCGTGCACAATGCCAGGAAGGCGAAATCAGAGAAGGCCAGTCCTGCTCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527466.1
CDS CCA 90 bp GTGGATTCCTCAGTATCTTTGACAGCTGCTATAAGCAGTGCATCGTaGGAGCAGTGGGAGCAGCGACAGCAGCTCCGCACAGCATTATCT +
Preference number: 5 (lower is better)
Translates to: VDSSVSLTAAISSAS*EQWEQRQQLRTALS
Trigger: AGATAATGCTGTGCGGAGCTGCTGTCGCTGCTCCCACTGCTCCCACGATGCACTGCTTATAGCAGCTGTCAAAGATACTGAGGAATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280241.12
ENST00000398301.6
CDS-3UTR CAA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCGCAAGATACAATCATaGACCCTGAGTCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSRKIQS*TLSLPS
Trigger: GGATGGCAGACTCAGGGTCAATGATTGTATCTTGCG...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AGCTCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTCGCAAGATACAATCATaGACCCTGAGTCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: SSWSWGRTPPSFFSRVTARKIQS*TLSLPS
Trigger: GGATGGCAGACTCAGGGTCAATGATTGTATCTTGCG...AGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTGGGCCTTTGAACAGTTaGATTTCCACAACGGTCTCC +
Preference number: 5 (lower is better)
Translates to: EEALISSLGQKARQRFIPGPLNS*ISTTVS
Trigger: GGAGACCGTTGTGGAAATCAAACTGTTCAAAGGCCC...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCGGGCCTTTGAACAGTTaGATTTCCACAACGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GSHLISWAESPSEVHPYTGPLNS*ISTTVS
Trigger: GGAGACCGTTGTGGAAATCAAACTGTTCAAAGGCCC...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTCTCCAGGAATGTGTaGGTTCCCCACACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVVSRNV*VPHTSC
Trigger: GCAGGAGGTGTGGGGAACCAACACATTCCTGGAGAC...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTGTCTCCAGGAATGTGTaGGTTCCCCACACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFVSRNV*VPHTSC
Trigger: GCAGGAGGTGTGGGGAACCAACACATTCCTGGAGAC...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAGCATGTGCTTTGGAATaGGTGAGTACCTTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPACALE*VSTFLE
Trigger: CTCCAGGAAGGTACTCACCAATTCCAAAGCACATGC...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTTTGAAGGCTGACGAGTaGCGGTGCTATGTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: EEALISSLGQKARQRFIPLKADE*RCYVGN
Trigger: ATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAA...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGCCCGTTGGAGAGTCATaGAAGGCTGACGAGTTGCGG +
Preference number: 5 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLPVGES*KADELR
Trigger: CCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGG...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCTTGTGCAGGACTACCTaGCGAGGCTCTCCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: PSFILQCLFCPTLWPLCFLCRTT*RGSPSR
Trigger: CCTGGAAGGAGAGCCTCGCAAGGTAGTCCTGCACAA...GAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTTTGTGCAGGACTACCTaGCGAGGCTCTCCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVLCRTT*RGSPSR
Trigger: CCTGGAAGGAGAGCCTCGCAAGGTAGTCCTGCACAA...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACTTGTGCAGGACTACCTaGCGAGGCTCTCCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYLCRTT*RGSPSR
Trigger: CCTGGAAGGAGAGCCTCGCAAGGTAGTCCTGCACAA...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTTTGTGCAGGACTACCTaGCGAGGCTCTCCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFLCRTT*RGSPSR
Trigger: CCTGGAAGGAGAGCCTCGCAAGGTAGTCCTGCACAA...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTAGGCCAGTGGAGCCTTaGTGCAGGACTACCTTGCGA +
Preference number: 5 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFRPVEP*CRTTLR
Trigger: TCGCAAGGTAGTCCTGCACAAAGGCTCCACTGGCCT...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCAGGCCAGTGGAGCCTTaGTGCAGGACTACCTTGCGA +
Preference number: 5 (lower is better)
Translates to: PSFILQCLFCPTLWPLCFRPVEP*CRTTLR
Trigger: TCGCAAGGTAGTCCTGCACAAAGGCTCCACTGGCCT...GAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGAGGCCAGTGGAGCCTTaGTGCAGGACTACCTTGCGA +
Preference number: 5 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLRPVEP*CRTTLR
Trigger: TCGCAAGGTAGTCCTGCACAAAGGCTCCACTGGCCT...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTAGGCCAGTGGAGCCTTaGTGCAGGACTACCTTGCGA +
Preference number: 5 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLRPVEP*CRTTLR
Trigger: TCGCAAGGTAGTCCTGCACAAAGGCTCCACTGGCCT...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGCTTTCCACCCTCCTTTaGCTGGGGATGACCCCCATC +
Preference number: 5 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLLSTLL*LGMTPI
Trigger: GATGGGGGTCATCCCCAGCAAAAGGAGGGTGGAAAG...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTCTTTCCACCCTCCTTTaGCTGGGGATGACCCCCATC +
Preference number: 5 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVLSTLL*LGMTPI
Trigger: GATGGGGGTCATCCCCAGCAAAAGGAGGGTGGAAAG...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGCTTTCCACCCTCCTTTaGCTGGGGATGACCCCCATC +
Preference number: 5 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKLSTLL*LGMTPI
Trigger: GATGGGGGTCATCCCCAGCAAAAGGAGGGTGGAAAG...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACCTTTCCACCCTCCTTTaGCTGGGGATGACCCCCATC +
Preference number: 5 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYLSTLL*LGMTPI
Trigger: GATGGGGGTCATCCCCAGCAAAAGGAGGGTGGAAAG...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCGACCCTCTCACCAATTaGCTTGGTGATTCTTCAAGC +
Preference number: 5 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSDPLTN*LGDSSS
Trigger: GCTTGAAGAATCACCAAGCAAATTGGTGAGAGGGTC...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCCAGCAAGCCTTCAGGTaGGAGAGAGCTCTGGACAAA +
Preference number: 5 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAQQAFR*ERALDK
Trigger: TTTGTCCAGAGCTCTCTCCAACCTGAAGGCTTGCTG...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTTTGGACACTGACCATTTTCTCCTGCCCATGGTTTaGGGTAGGGCTGGTGGGAAC +
Preference number: 5 (lower is better)
Translates to: RTPPSFFSRVTALDTDHFLLPMV*GRAGGN
Trigger: GTTCCCACCAGCCCTACCCAAAACCATGGGCAGGAG...AAAATGGTCAGTGTCCAAAGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS CCA 90 bp CACAATCAACTTCCCACCTCGGCTCAGAGACGAACAGAATCAGGCTaGAGCTGTCACTTGCAGGCTGTTGCTTTCTCAGTTCCTCTCATG +
Preference number: 5 (lower is better)
Translates to: HNQLPTSAQRRTESG*SCHLQAVAFSVPLM
Trigger: CATGAGAGGAACTGAGAAAGCAACAGCCTGCAAGTGACAGCTCCAGCCTGATTCTGTTCGTCTCTGAGCCGAGGTGGGAAGTTGATTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527466.1
CDS-3UTR CAA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCGTCTCCAGGAATGTGTaGGTTCCCCACACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGVSRNV*VPHTSC
Trigger: GCAGGAGGTGTGGGGAACCAACACATTCCTGGAGAC...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACACTGATGAAAGCTCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGCATGTGCTTTGGAATaGGTGAGTACCTTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: TLMKAHGAGDGRLQASSQACALE*VSTFLE
Trigger: CTCCAGGAAGGTACTCACCAATTCCAAAGCACATGC...TTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGAGCTTTCATCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGAGAGGAGGAAGCTTTaGTCACACTCAACAGGGGAA +
Preference number: 5 (lower is better)
Translates to: ALISSLGQKARQRFIPTPERRKL*SHSTGE
Trigger: TTCCCCTGTTGAGTGTGACAAAAGCTTCCTCCTCTC...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTTTGGACACTTTGAAGGCTGACGAGTaGCGGTGCTATGTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: SWGRTPPSFFSRVTALDTLKADE*RCYVGN
Trigger: ATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAA...AGTGTCCAAAGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATATTGTGCAGGACTACCTaGCGAGGCTCTCCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFILCRTT*RGSPSR
Trigger: CCTGGAAGGAGAGCCTCGCAAGGTAGTCCTGCACAA...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CAGGAGAACCCAGGGTTTTACATCAAAATGGGTGAAGCAGAGGGATACTCCTTGTTGTGCAGGACTACCTaGCGAGGCTCTCCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: QENPGFYIKMGEAEGYSLLCRTT*RGSPSR
Trigger: CCTGGAAGGAGAGCCTCGCAAGGTAGTCCTGCACAA...CAAGGAGTATCCCTCTGCTTCACCCATTTTGATGTAAAACCCTGGGTTCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCAGGCCAGTGGAGCCTTaGTGCAGGACTACCTTGCGA +
Preference number: 5 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPRPVEP*CRTTLR
Trigger: TCGCAAGGTAGTCCTGCACAAAGGCTCCACTGGCCT...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTACACCAGGCCCAGGCCAGTGGAGCCTTaGTGCAGGACTACCTTGCGA +
Preference number: 5 (lower is better)
Translates to: QILGILNRKVLGHKYTRPRPVEP*CRTTLR
Trigger: TCGCAAGGTAGTCCTGCACAAAGGCTCCACTGGCCT...GGGCCTGGTGTACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACTTTCCACCCTCCTTTaGCTGGGGATGACCCCCATC +
Preference number: 5 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFILSTLL*LGMTPI
Trigger: GATGGGGGTCATCCCCAGCAAAAGGAGGGTGGAAAG...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAAGAGCAGCCAGAACGGAAAGGAATACACTCATGCAAGGCTACCAGAAATGTGCTTTCCACCCTCCTTTaGCTGGGGATGACCCCCATC +
Preference number: 5 (lower is better)
Translates to: EEQPERKGIHSCKATRNVLSTLL*LGMTPI
Trigger: GATGGGGGTCATCCCCAGCAAAAGGAGGGTGGAAAG...CACATTTCTGGTAGCCTTGCATGAGTGTATTCCTTTCCGTTCTGGCTGCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR CAA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCGATATCAAGTCGTCATaGATCCGATCCTTCATGGGC +
Preference number: 5 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSDIKSS*IRSFMG
Trigger: GCCCATGAAGGATCGGATCAATGACGACTTGATATC...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTGATATCAAGTCGTCATaGATCCGATCCTTCATGGGC +
Preference number: 5 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSDIKSS*IRSFMG
Trigger: GCCCATGAAGGATCGGATCAATGACGACTTGATATC...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCTGCTGATAGGGACACTGATGAAAGCTCATGGAGCTGGGGACGGACGCCTCCAGCAACTTGTAACCGCTaGATAGCATTTCCTGATACA +
Preference number: 5 (lower is better)
Translates to: AADRDTDESSWSWGRTPPATCNR*IAFPDT
Trigger: TGTATCAGGAAATGCTATCAAGCGGTTACAAGTTGC...TGGAGGCGTCCGTCCCCAGCTCCATGAGCTTTCATCAGTGTCCCTATCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACGTCTCGAGCCAGAGGTaGGAGAGTTCTTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYVSSQR*ESSFLA
Trigger: AGCCAGGAAAGAACTCTCCAACCTCTGGCTCGAGAC...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCGTCTGTCCTCATGAGTaGCTAGGGAGATACTATACT +
Preference number: 5 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSVCPHE*LGRYYT
Trigger: AGTATAGTATCTCCCTAGCAACTCATGAGGACAGAC...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGTCCTCTCAGAGTCTTaGTTCCATAACCGTCGTCAC +
Preference number: 5 (lower is better)
Translates to: ALISSLGQKARQRFIPTPVLSES*FHNRRH
Trigger: GTGACGACGGTTATGGAACAAAGACTCTGAGAGGAC...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330014.11
ENST00000418306.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCGTCCTCTCAGAGTCTTaGTTCCATAACCGTCGTCAC +
Preference number: 5 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAVLSES*FHNRRH
Trigger: GTGACGACGGTTATGGAACAAAGACTCTGAGAGGAC...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330014.11
ENST00000418306.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTACAAAACGACATGTCTaGAAGGCACTGAGTGAGAGC +
Preference number: 5 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSTKRHV*KALSES
Trigger: GCTCTCACTCAGTGCCTTCAAGACATGTCGTTTTGT...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398309.6
CDS-3UTR CAA 90 bp TACCAGAAATGTGAGCGAAAGGCAAGTAAAAGCCGCAGAGGAGGCTGCATTAAGAGCTTCTCCGTCTCCTaGGTGCCAGGTTCTCCTGTC +
Preference number: 5 (lower is better)
Translates to: YQKCERKASKSRRGGCIKSFSVS*VPGSPV
Trigger: GACAGGAGAACCTGGCACCAAGGAGACGGAGAAGCT...CTTAATGCAGCCTCCTCTGCGGCTTTTACTTGCCTTTCGCTCACATTTCTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR CAA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTAAGCTTCTCCGTCTCCTaGGTGCCAGGTTCTCCTGTC +
Preference number: 5 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVSFSVS*VPGSPV
Trigger: GACAGGAGAACCTGGCACCAAGGAGACGGAGAAGCT...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404783.7
ENST00000426717.6
CDS-3UTR CAA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTAGCTTCTCCGTCTCCTaGGTGCCAGGTTCTCCTGTC +
Preference number: 5 (lower is better)
Translates to: PITDVGNGKADEVRVLAISFSVS*VPGSPV
Trigger: GACAGGAGAACCTGGCACCAAGGAGACGGAGAAGCT...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404783.7
ENST00000426717.6
CDS-3UTR CAA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTACTGCAGCTCCCGATTaGGTAAAAAGCCAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: PITLMALSLALLPSLHAGTAAPD*VKSQWL
Trigger: AAGCCACTGGCTTTTTACCAAATCGGGAGCTGCAGT...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR CAA 90 bp AAGATACAATCATTGACCCTGAGTCTGCCATCCTCTGCTGCAGCACCTCCTGGTCGCAAGATACAATCATaGACCCTGAGTCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: KIQSLTLSLPSSAAAPPGRKIQS*TLSLPS
Trigger: GGATGGCAGACTCAGGGTCAATGATTGTATCTTGCG...ACCAGGAGGTGCTGCAGCAGAGGATGGCAGACTCAGGGTCAATGATTGTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529401.5
CDS-3UTR CAA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGGGGCCTTTGAACAGTTaGATTTCCACAACGGTCTCC +
Preference number: 5 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKGPLNS*ISTTVS
Trigger: GGAGACCGTTGTGGAAATCAAACTGTTCAAAGGCCC...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCGCATGTGCTTTGGAATaGGTGAGTACCTTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFACALE*VSTFLE
Trigger: CTCCAGGAAGGTACTCACCAATTCCAAAGCACATGC...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTCCCGTTGGAGAGTCATaGAAGGCTGACGAGTTGCGG +
Preference number: 5 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLPVGES*KADELR
Trigger: CCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGG...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTTTTAAAACTAAGTCCTaGACTTGGCAGCCCACTGTC +
Preference number: 5 (lower is better)
Translates to: EEALISSLGQKARQRFIPFKTKS*TWQPTV
Trigger: GACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAAA...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AGGAGAACCCAGGGTTTTACATCAAAATGGGTGAAGCAGAGGGATACTCCTTGTCTTTCCACCCTCCTTTaGCTGGGGATGACCCCCATC +
Preference number: 5 (lower is better)
Translates to: RRTQGFTSKWVKQRDTPCLSTLL*LGMTPI
Trigger: GATGGGGGTCATCCCCAGCAAAAGGAGGGTGGAAAG...ACAAGGAGTATCCCTCTGCTTCACCCATTTTGATGTAAAACCCTGGGTTCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCAAGAATGAGGTCTTCTaGTCCTCGTTCAGGATCACT +
Preference number: 5 (lower is better)
Translates to: GSHLISWAESPSEVHPYTKNEVF*SSFRIT
Trigger: AGTGATCCTGAACGAGGACAAGAAGACCTCATTCTT...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AGCTCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTAAGAATGAGGTCTTCTaGTCCTCGTTCAGGATCACT +
Preference number: 5 (lower is better)
Translates to: SSWSWGRTPPSFFSRVTAKNEVF*SSFRIT
Trigger: AGTGATCCTGAACGAGGACAAGAAGACCTCATTCTT...AGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp GGAGTATTCCCACCTCCCTCCCATCCTGTGCTACAGCTCGGTGGAGAAACATCCCCGGCTTCTATAAACTaGTGCTCTTGGATATCTTTC +
Preference number: 5 (lower is better)
Translates to: GVFPPPSHPVLQLGGETSPASIN*CSWISF
Trigger: GAAAGATATCCAAGAGCACAAGTTTATAGAAGCCGG...GGATGTTTCTCCACCGAGCTGTAGCACAGGATGGGAGGGAGGTGGGAATACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTGGTTCCATATAAATaGTCATTGTACTGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSLVPYK*SLYWPA
Trigger: AGCCGGCCAGTACAATGACAATTTATATGGAACCAG...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTACACCTGGCACTTaGAGCAAACCAAAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFPTPGT*SKPKPS
Trigger: GGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCCCTACACCTGGCACTTaGAGCAAACCAAAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGPTPGT*SKPKPS
Trigger: GGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCTCTCATCTCATCTCTaGGGCAGAAAGCCCGTCAGA +
Preference number: 5 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFLSSHL*GRKPVR
Trigger: TCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAG...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCCTCTCATCTCATCTCTaGGGCAGAAAGCCCGTCAGA +
Preference number: 5 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGLSSHL*GRKPVR
Trigger: TCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAG...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTGGAACAGATCTCTCATaGGCTCTAGTACCATCTCTG +
Preference number: 5 (lower is better)
Translates to: PITLMALSLALLPSLHAGGTDLS*ALVPSL
Trigger: CAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCC...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCGAGAGGGAGAATGCATaGCTAGCCCTTCCATTGGCA +
Preference number: 5 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGERENA*LALPLA
Trigger: TGCCAATGGAAGGGCTAGCAATGCATTCTCCCTCTC...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCCCTGAAACTGGCGAATaGCAGACATGGACATATCTT +
Preference number: 5 (lower is better)
Translates to: GSHLISWAESPSEVHPYTPETGE*QTWTYL
Trigger: AAGATATGTCCATGTCTGCAATTCGCCAGTTTCAGG...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTTCTGGGAGCAATATaGATGAAAGTAGGCCTTGAC +
Preference number: 5 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSLLGAI*MKVGLD
Trigger: GTCAAGGCCTACTTTCATCAATATTGCTCCCAGAAG...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCGGTTGGTGGTTCAATTaGATTGTACTTAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: GSHLISWAESPSEVHPYTGWWFN*IVLSHS
Trigger: GCTGTGGCTAAGTACAATCAAATTGAACCACCAACC...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTATGTGTGAAGGTGACATaGCACCCCCAGCAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVCVKVT*HPQQAF
Trigger: GAAGGCTTGCTGGGGGTGCAATGTCACCTTCACACA...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCGCCTGTCTTAGCTTaGTCCTCAGCTGTTACAAGA +
Preference number: 5 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKPPVLA*SSAVTR
Trigger: TCTTGTAACAGCTGAGGACAAAGCTAAGACAGGCGG...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGCATTGGGAGTCAACCTaGCCACTTGGTTGTCTGTCC +
Preference number: 5 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLHWEST*PLGCLS
Trigger: GGACAGACAACCAAGTGGCAAGGTTGACTCCCAATG...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCAAGTCTGCCATCCCATaGGGAGTCAACCTTGCCACT +
Preference number: 5 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGKSAIP*GVNLAT
Trigger: AGTGGCAAGGTTGACTCCCAATGGGATGGCAGACTT...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGAAGTCTGCCATCCCATaGGGAGTCAACCTTGCCACT +
Preference number: 5 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKKSAIP*GVNLAT
Trigger: AGTGGCAAGGTTGACTCCCAATGGGATGGCAGACTT...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTAAGTCTGCCATCCCATaGGGAGTCAACCTTGCCACT +
Preference number: 5 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFKSAIP*GVNLAT
Trigger: AGTGGCAAGGTTGACTCCCAATGGGATGGCAGACTT...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGGTCCTCTCAGAGTCTTaGTTCCATAACCGTCGTCAC +
Preference number: 5 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKVLSES*FHNRRH
Trigger: GTGACGACGGTTATGGAACAAAGACTCTGAGAGGAC...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330014.11
ENST00000418306.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGAGCGTCCTCATCTaGATATCGATACTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: GSHLISWAESPSEVHPYTWSVLI*ISILLH
Trigger: GTGAAGAAGTATCGATATCAAGATGAGGACGCTCCA...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398309.6
CDS TCA 90 bp CGGCTGCAGCTGTGTTGCTTGGTGAGGTATGCATTCATACTGCACTaGTGCCTACTCTTTCCTTTGGTCAGCTCTGCACAGAAATGTCTC +
Preference number: 5 (lower is better)
Translates to: RLQLCCLVRYAFILH*CLLFPLVSSAQKCL
Trigger: GAGACATTTCTGTGCAGAGCTGACCAAAGGAAAGAGTAGGCATCAGTGCAGTATGAATGCATACCTCACCAAGCAACACAGCTGCAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280241.12
ENST00000398301.6
CDS TCA 90 bp AGGCCTGGTGTAGTCGTCGTCAACAAGCATGTGCTTTGGAATTGGTaGGTACCTTCCTGGAGAGATGGGTGGCAGGGAGGTTTTATATTC +
Preference number: 5 (lower is better)
Translates to: RPGVVVVNKHVLWNW*VPSWRDGWQGGFIF
Trigger: GAATATAAAACCTCCCTGCCACCCATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCACATGCTTGTTGACGACGACTACACCAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS TCA 90 bp CCAGATAGAGGCAAACATAGCGATGCCAATGGAAGGAATTCACAATaGAGCTGCCGCACAATCAACTTCCCACCTCGGCTCAGAGACGAA +
Preference number: 5 (lower is better)
Translates to: PDRGKHSDANGRNSQ*SCRTINFPPRLRDE
Trigger: TTCGTCTCTGAGCCGAGGTGGGAAGTTGATTGTGCGGCAGCTTCATTGTGAATTCCTTCCATTGGCATCGCTATGTTTGCCTCTATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527466.1
CDS CCA 90 bp GGGCACTTGATGCAGGATGAGTTGGCGAAGCAGATTTCTTCACACTaGAGTCATTCACATCATGCCATCTCTTCGCATTCAAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GHLMQDELAKQISSH*SHSHHAISSHSSSS
Trigger: GGAGCTGCTTGAATGCGAAGAGATGGCATGATGTGAATGACTCCAGTGTGAAGAAATCTGCTTCGCCAACTCATCCTGCATCAAGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR CAA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCGATTCCTCAGTATCTTaGACAGCTGCTATAAGCAGT +
Preference number: 5 (lower is better)
Translates to: GSHLISWAESPSEVHPYTDSSVS*TAAISS
Trigger: ACTGCTTATAGCAGCTGTCAAAGATACTGAGGAATC...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR CAA 90 bp GAGGTAACAAAGCCACGGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACCAAGTCCCTTTGCCCTaGGTGCTCGTCTTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: EVTKPRFTFFGHEPSIFHQVPLP*VLVLWG
Trigger: CCCCCACAAGACGAGCACCAAGGGCAAAGGGACTTG...GTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACCGTGGCTTTGTTACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTCCCCACAAGTCCCTTaGCCCTTGGTGCTCGTCTTG +
Preference number: 5 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFSPQVP*PLVLVL
Trigger: CAAGACGAGCACCAAGGGCAAAGGGACTTGTGGGGA...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR CAA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCGCAAGATACAATCATaGACCCTGAGTCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFRKIQS*TLSLPS
Trigger: GGATGGCAGACTCAGGGTCAATGATTGTATCTTGCG...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACCGCAAGATACAATCATaGACCCTGAGTCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYRKIQS*TLSLPS
Trigger: GGATGGCAGACTCAGGGTCAATGATTGTATCTTGCG...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCGGGCCTTTGAACAGTTaGATTTCCACAACGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PSFILQCLFCPTLWPLCFGPLNS*ISTTVS
Trigger: GGAGACCGTTGTGGAAATCAAACTGTTCAAAGGCCC...GAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTGGGCCTTTGAACAGTTaGATTTCCACAACGGTCTCC +
Preference number: 5 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLGPLNS*ISTTVS
Trigger: GGAGACCGTTGTGGAAATCAAACTGTTCAAAGGCCC...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCGTCTCCAGGAATGTGTaGGTTCCCCACACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTVSRNV*VPHTSC
Trigger: GCAGGAGGTGTGGGGAACCAACACATTCCTGGAGAC...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCGTCTCCAGGAATGTGTaGGTTCCCCACACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFVSRNV*VPHTSC
Trigger: GCAGGAGGTGTGGGGAACCAACACATTCCTGGAGAC...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATCAACCTTCCATCTTTTaGTGCAGCTCCTCCATCTAT +
Preference number: 5 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHQPSIF*CSSSIY
Trigger: ATAGATGGAGGAGCTGCACAAAAAGATGGAAGGTTG...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAGTAGATGGTTTTCCATaGGTGGAGAATAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPVDGFP*VENKSE
Trigger: CTCACTCTTATTCTCCACCAATGGAAAACCATCTAC...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCATATTCTAAAGTGCCATaGTTGCCAGAGAGTAGATGG +
Preference number: 5 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPYSKVP*LPESRW
Trigger: CCATCTACTCTCTGGCAACAATGGCACTTTAGAATA...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCTATTCTAAAGTGCCATaGTTGCCAGAGAGTAGATGG +
Preference number: 5 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSYSKVP*LPESRW
Trigger: CCATCTACTCTCTGGCAACAATGGCACTTTAGAATA...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCGCATGTGCTTTGGAATaGGTGAGTACCTTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGACALE*VSTFLE
Trigger: CTCCAGGAAGGTACTCACCAATTCCAAAGCACATGC...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGGCATGTGCTTTGGAATaGGTGAGTACCTTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKACALE*VSTFLE
Trigger: CTCCAGGAAGGTACTCACCAATTCCAAAGCACATGC...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCGCATGTGCTTTGGAATaGGTGAGTACCTTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFACALE*VSTFLE
Trigger: CTCCAGGAAGGTACTCACCAATTCCAAAGCACATGC...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGGAGAGGAGGAAGCTTTaGTCACACTCAACAGGGGAA +
Preference number: 5 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLERRKL*SHSTGE
Trigger: TTCCCCTGTTGAGTGTGACAAAAGCTTCCTCCTCTC...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTAGTTGCGGTGCTATGTaGGGAATGACTGGTCATCTC +
Preference number: 5 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVSCGAM*GMTGHL
Trigger: GAGATGACCAGTCATTCCCAACATAGCACCGCAACT...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCAGTTGCGGTGCTATGTaGGGAATGACTGGTCATCTC +
Preference number: 5 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGSCGAM*GMTGHL
Trigger: GAGATGACCAGTCATTCCCAACATAGCACCGCAACT...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCAGTTGCGGTGCTATGTaGGGAATGACTGGTCATCTC +
Preference number: 5 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFSCGAM*GMTGHL
Trigger: GAGATGACCAGTCATTCCCAACATAGCACCGCAACT...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTTTGAAGGCTGACGAGTaGCGGTGCTATGTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLLKADE*RCYVGN
Trigger: ATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAA...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCAGGCCAGTGGAGCCTTaGTGCAGGACTACCTTGCGA +
Preference number: 5 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFRPVEP*CRTTLR
Trigger: TCGCAAGGTAGTCCTGCACAAAGGCTCCACTGGCCT...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTAAGAATGAGGTCTTCTaGTCCTCGTTCAGGATCACT +
Preference number: 5 (lower is better)
Translates to: ALISSLGQKARQRFIPTPKNEVF*SSFRIT
Trigger: AGTGATCCTGAACGAGGACAAGAAGACCTCATTCTT...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATAAGAATGAGGTCTTCTaGTCCTCGTTCAGGATCACT +
Preference number: 5 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHKNEVF*SSFRIT
Trigger: AGTGATCCTGAACGAGGACAAGAAGACCTCATTCTT...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCAAGAATGAGGTCTTCTaGTCCTCGTTCAGGATCACT +
Preference number: 5 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAKNEVF*SSFRIT
Trigger: AGTGATCCTGAACGAGGACAAGAAGACCTCATTCTT...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCACCGGCTTCTATAAACTaGTGCTCTTGGATATCTTTC +
Preference number: 5 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPPASIN*CSWISF
Trigger: GAAAGATATCCAAGAGCACAAGTTTATAGAAGCCGG...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AGCTCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTCCGGCTTCTATAAACTaGTGCTCTTGGATATCTTTC +
Preference number: 5 (lower is better)
Translates to: SSWSWGRTPPSFFSRVTAPASIN*CSWISF
Trigger: GAAAGATATCCAAGAGCACAAGTTTATAGAAGCCGG...AGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTCTGGTTCCATATAAATaGTCATTGTACTGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: PITLMALSLALLPSLHAGLVPYK*SLYWPA
Trigger: AGCCGGCCAGTACAATGACAATTTATATGGAACCAG...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTGCAACTTGTAACCGCTaGATAGCATTTCCTGATACA +
Preference number: 5 (lower is better)
Translates to: EEALISSLGQKARQRFIPATCNR*IAFPDT
Trigger: TGTATCAGGAAATGCTATCAAGCGGTTACAAGTTGC...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTCCTACACCTGGCACTTaGAGCAAACCAAAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTPTPGT*SKPKPS
Trigger: GGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCCCTACACCTGGCACTTaGAGCAAACCAAAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGPTPGT*SKPKPS
Trigger: GGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAGAGAGCTCTGGACAAAGTTTGCAGTGTTAGCACCAGTCTGGCCCCAGGCTCCGAACAATGCCTGTTTTaGGAAAGAGACTCTCATTCT +
Preference number: 5 (lower is better)
Translates to: ERALDKVCSVSTSLAPGSEQCLF*ERDSHS
Trigger: AGAATGAGAGTCTCTTTCCAAAAACAGGCATTGTTC...GGAGCCTGGGGCCAGACTGGTGCTAACACTGCAAACTTTGTCCAGAGCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTATAGAGACATCAACATaGGGAAGTGCAAGACAACAC +
Preference number: 5 (lower is better)
Translates to: EEALISSLGQKARQRFIPIETST*GSARQH
Trigger: GTGTTGTCTTGCACTTCCCAATGTTGATGTCTCTAT...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCATAGAGACATCAACATaGGGAAGTGCAAGACAACAC +
Preference number: 5 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSIETST*GSARQH
Trigger: GTGTTGTCTTGCACTTCCCAATGTTGATGTCTCTAT...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGCAAGCCTTCAGGTaGGAGAGAGCTCTGGACAAA +
Preference number: 5 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFIQQAFR*ERALDK
Trigger: TTTGTCCAGAGCTCTCTCCAACCTGAAGGCTTGCTG...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCGTCCAGTGCATGGACTaGCTGTCTGAATCAGCCATG +
Preference number: 5 (lower is better)
Translates to: PRVEWLLSLKSLSPNTMGVQCMD*LSESAM
Trigger: CATGGCTGATTCAGACAGCAAGTCCATGCACTGGAC...GCCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATGTCTGTCCTCATGAGTaGCTAGGGAGATACTATACT +
Preference number: 5 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHVCPHE*LGRYYT
Trigger: AGTATAGTATCTCCCTAGCAACTCATGAGGACAGAC...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGAACCTTGCCACTTGGTaGTCTGTCCTCATGAGTTGC +
Preference number: 5 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKNLATW*SVLMSC
Trigger: GCAACTCATGAGGACAGACAACCAAGTGGCAAGGTT...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCAAGAATGAGGTCTTCTaGTCCTCTCAGAGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSKNEVF*SSQSLC
Trigger: ACAAAGACTCTGAGAGGACAAGAAGACCTCATTCTT...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330014.11
ENST00000418306.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCAAGAATGAGGTCTTCTaGTCCTCTCAGAGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: GSHLISWAESPSEVHPYTKNEVF*SSQSLC
Trigger: ACAAAGACTCTGAGAGGACAAGAAGACCTCATTCTT...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330014.11
ENST00000418306.6
ENST00000426717.6
CDS-3UTR CAA 90 bp ATGCAAGGCTACCAGAAATGTGAGCGAAAGGCAAGTAAAAGCCGCAGAGGAGGCAAGAGATACCAAGCATaGAAGAGCAGCCAGAACGGA +
Preference number: 5 (lower is better)
Translates to: MQGYQKCERKASKSRRGGKRYQA*KSSQNG
Trigger: TCCGTTCTGGCTGCTCTTCAATGCTTGGTATCTCTT...GCCTCCTCTGCGGCTTTTACTTGCCTTTCGCTCACATTTCTGGTAGCCTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR CAA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCAGTTGCGGTGCTATGTaGGGAATGACTGGTGTAGTC +
Preference number: 5 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFSCGAM*GMTGVV
Trigger: GACTACACCAGTCATTCCCAACATAGCACCGCAACT...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418306.6
CDS GCA 90 bp AATAGTGCCTGGGAGAAGCAGGCTTATCACATAGTTTGTTCACAGTaGTGTAAACAGGTTCCGGAGGCCTGGTGTAGTCGTCGTCAACAA +
Preference number: 5 (lower is better)
Translates to: NSAWEKQAYHIVCSQ*CKQVPEAWCSRRQQ
Trigger: TTGTTGACGACGACTACACCAGGCCTCCGGAACCTGTTTACAGCACTGTGAACAAACTATGTGATAAGCCTGCTTCTCCCAGGCACTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAGGTAACAAAGCCACGGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTCCCCACAAGTCCCTTaGCCCTTGGTGCTCGTCTTG +
Preference number: 5 (lower is better)
Translates to: EVTKPRFTFFGHEPSIFHSPQVP*PLVLVL
Trigger: CAAGACGAGCACCAAGGGCAAAGGGACTTGTGGGGA...GTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACCGTGGCTTTGTTACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTCCAAAGTATCTGTGTaGACAATTATAGGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: GSHLISWAESPSEVHPYTSKVSV*TIIGAG
Trigger: TCCTGCTCCTATAATTGTCAACACAGATACTTTGGA...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTCGCAAGATACAATCATaGACCCTGAGTCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTRKIQS*TLSLPS
Trigger: GGATGGCAGACTCAGGGTCAATGATTGTATCTTGCG...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTCGCAAGATACAATCATaGACCCTGAGTCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSRKIQS*TLSLPS
Trigger: GGATGGCAGACTCAGGGTCAATGATTGTATCTTGCG...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AGCTCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTAAACCTTTAGGGCCTTaGAACAGTTTGATTTCCACA +
Preference number: 5 (lower is better)
Translates to: SSWSWGRTPPSFFSRVTAKPLGP*NSLIST
Trigger: TGTGGAAATCAAACTGTTCAAAGGCCCTAAAGGTTT...AGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTAAACCTTTAGGGCCTTaGAACAGTTTGATTTCCACA +
Preference number: 5 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSKPLGP*NSLIST
Trigger: TGTGGAAATCAAACTGTTCAAAGGCCCTAAAGGTTT...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCAACCTTCCATCTTTTaGTGCAGCTCCTCCATCTAT +
Preference number: 5 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKQPSIF*CSSSIY
Trigger: ATAGATGGAGGAGCTGCACAAAAAGATGGAAGGTTG...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGTAGATGGTTTTCCATaGGTGGAGAATAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: ALISSLGQKARQRFIPTPVDGFP*VENKSE
Trigger: CTCACTCTTATTCTCCACCAATGGAAAACCATCTAC...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATGTAGATGGTTTTCCATaGGTGGAGAATAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHVDGFP*VENKSE
Trigger: CTCACTCTTATTCTCCACCAATGGAAAACCATCTAC...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCGTAGATGGTTTTCCATaGGTGGAGAATAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAVDGFP*VENKSE
Trigger: CTCACTCTTATTCTCCACCAATGGAAAACCATCTAC...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTTTGGTAGATGGTTTTCCATaGGTGGAGAATAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: SWSWGRTPPSFFSRVTALVDGFP*VENKSE
Trigger: CTCACTCTTATTCTCCACCAATGGAAAACCATCTAC...CAAAGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTTATTCTAAAGTGCCATaGTTGCCAGAGAGTAGATGG +
Preference number: 5 (lower is better)
Translates to: ALISSLGQKARQRFIPTPYSKVP*LPESRW
Trigger: CCATCTACTCTCTGGCAACAATGGCACTTTAGAATA...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATTATTCTAAAGTGCCATaGTTGCCAGAGAGTAGATGG +
Preference number: 5 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHYSKVP*LPESRW
Trigger: CCATCTACTCTCTGGCAACAATGGCACTTTAGAATA...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTGCATGTGCTTTGGAATaGGTGAGTACCTTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSACALE*VSTFLE
Trigger: CTCCAGGAAGGTACTCACCAATTCCAAAGCACATGC...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCAGTTGCGGTGCTATGTaGGGAATGACTGGTCATCTC +
Preference number: 5 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPSCGAM*GMTGHL
Trigger: GAGATGACCAGTCATTCCCAACATAGCACCGCAACT...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCTTGAAGGCTGACGAGTaGCGGTGCTATGTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPLKADE*RCYVGN
Trigger: ATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAA...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCCCGTTGGAGAGTCATaGAAGGCTGACGAGTTGCGG +
Preference number: 5 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFPVGES*KADELR
Trigger: CCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGG...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAACCCGTTGGAGAGTCATaGAAGGCTGACGAGTTGCGG +
Preference number: 5 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKPVGES*KADELR
Trigger: CCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGG...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATGCAAGGCTACCAGAAATGTGAGCGAAAGGCAAGTAAAAGCCGCAGAGGAGGCTTTAAAACTAAGTCCTaGACTTGGCAGCCCACTGTC +
Preference number: 5 (lower is better)
Translates to: MQGYQKCERKASKSRRGGFKTKS*TWQPTV
Trigger: GACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAAA...GCCTCCTCTGCGGCTTTTACTTGCCTTTCGCTCACATTTCTGGTAGCCTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR CAA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGTTTAAAACTAAGTCCTaGACTTGGCAGCCCACTGTC +
Preference number: 5 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKFKTKS*TWQPTV
Trigger: GACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAAA...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCGATATCAAGTCGTCATaGATCCGATCCTTCATGGGC +
Preference number: 5 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFDIKSS*IRSFMG
Trigger: GCCCATGAAGGATCGGATCAATGACGACTTGATATC...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTGATATCAAGTCGTCATaGATCCGATCCTTCATGGGC +
Preference number: 5 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLDIKSS*IRSFMG
Trigger: GCCCATGAAGGATCGGATCAATGACGACTTGATATC...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCCCATATAAATTGTCATaGTACTGGCCGGCTTCTATA +
Preference number: 5 (lower is better)
Translates to: GSHLISWAESPSEVHPYTPYKLS*YWPASI
Trigger: TATAGAAGCCGGCCAGTACAATGACAATTTATATGG...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AGCTCATGGAGCTGGGGACGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTCCATATAAATTGTCATaGTACTGGCCGGCTTCTATA +
Preference number: 5 (lower is better)
Translates to: SSWSWGRTPPSFFSRVTAPYKLS*YWPASI
Trigger: TATAGAAGCCGGCCAGTACAATGACAATTTATATGG...AGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCGTCCCCAGCTCCATGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCACCATATAAATTGTCATaGTACTGGCCGGCTTCTATA +
Preference number: 5 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPPYKLS*YWPASI
Trigger: TATAGAAGCCGGCCAGTACAATGACAATTTATATGG...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCTGGTTCCATATAAATaGTCATTGTACTGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKLVPYK*SLYWPA
Trigger: AGCCGGCCAGTACAATGACAATTTATATGGAACCAG...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCGCAACTTGTAACCGCTaGATAGCATTTCCTGATACA +
Preference number: 5 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAATCNR*IAFPDT
Trigger: TGTATCAGGAAATGCTATCAAGCGGTTACAAGTTGC...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTAAGTTATTCAACTATTaGCATGGCAGGCTCAGGTTA +
Preference number: 5 (lower is better)
Translates to: EEALISSLGQKARQRFIPKLFNY*HGRLRL
Trigger: TAACCTGAGCCTGCCATGCAAATAGTTGAATAACTT...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTGAACAATGCCTGTTTTaGGAAAGAGACTCTCATTCT +
Preference number: 5 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSEQCLF*ERDSHS
Trigger: AGAATGAGAGTCTCTTTCCAAAAACAGGCATTGTTC...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGGAGAGGGAGAATGCATaGCTAGCCCTTCCATTGGCA +
Preference number: 5 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGERENA*LALPLA
Trigger: TGCCAATGGAAGGGCTAGCAATGCATTCTCCCTCTC...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCTTCTGGGAGCAATATaGATGAAAGTAGGCCTTGAC +
Preference number: 5 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKLLGAI*MKVGLD
Trigger: GTCAAGGCCTACTTTCATCAATATTGCTCCCAGAAG...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTAGGATATTTACAGACTaGAGTGTGTGTGTGTGTTTC +
Preference number: 5 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSRIFTD*SVCVCF
Trigger: GAAACACACACACACACTCAAGTCTGTAAATATCCT...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCACACAAAACTGTCATATaGAAAGGATCTAACGGGTAC +
Preference number: 5 (lower is better)
Translates to: GQKARQRFIPTPGTLSKPHKTVI*KGSNGY
Trigger: GTACCCGTTAGATCCTTTCAATATGACAGTTTTGTG...TGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTTGCCTTGGTTTTGAGTaGTCGTCTCATCAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: ALISSLGQKARQRFIPTPCLGFE*SSHQFH
Trigger: ATGAAACTGATGAGACGACAACTCAAAACCAAGGCA...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR CAA 90 bp GTTGGCATCCTTCAGTTAAAGGAACAACAGCCTTTCACCTGGTGTGGTCAGTGGAGAAAGTGCAGCTGCTaGGCTTTCACATCCACCTTT +
Preference number: 5 (lower is better)
Translates to: VGILQLKEQQPFTWCGQWRKCSC*AFTSTF
Trigger: AAAGGTGGATGTGAAAGCCAAGCAGCTGCACTTTCT...CCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAACTGAAGGATGCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR CAA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTATCAACGATAAAGTGTaGTTGGTGCAAGCAACTTTG +
Preference number: 5 (lower is better)
Translates to: EEALISSLGQKARQRFIPINDKV*LVQATL
Trigger: CAAAGTTGCTTGCACCAACAACACTTTATCGTTGAT...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS TCA 90 bp CTTTCCACTGCCACAGGAGTCAATATCTCTTTTCAGGTCTCAGTTTaGTCCAGCTGGATTGAGGCCAAGAGCCAGGTAACTGTTGCAAAC +
Preference number: 5 (lower is better)
Translates to: LSTATGVNISFQVSV*SSWIEAKSQVTVAN
Trigger: GTTTGCAACAGTTACCTGGCTCTTGGCCTCAATCCAGCTGGATCAAACTGAGACCTGAAAAGAGATATTGACTCCTGTGGCAGTGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376104.7
ENST00000472545.6
ENST00000526147.1
ENST00000650630.1
CDS TCA 90 bp ATGACTGGTGTAGTCGTCGTCAACAAGCATGTGCTTTGGAATTGGTaGGTACCTTCCTGGAGAGATGGGTGGCAGGGAGGTTTTATATTC +
Preference number: 5 (lower is better)
Translates to: MTGVVVVNKHVLWNW*VPSWRDGWQGGFIF
Trigger: GAATATAAAACCTCCCTGCCACCCATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCACATGCTTGTTGACGACGACTACACCAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418306.6
CDS GCA 90 bp TATGGCCCACCTGTCTTCTTGACTGGCATTCTTGGGTCTTTCCACTaGCACAGGAGTCAATATCTCTTTTCAGGTCTCAGTTTGATCCAG +
Preference number: 5 (lower is better)
Translates to: YGPPVFLTGILGSFH*HRSQYLFSGLSLIQ
Trigger: CTGGATCAAACTGAGACCTGAAAAGAGATATTGACTCCTGTGGCAGTGGAAAGACCCAAGAATGCCAGTCAAGAAGACAGGTGGGCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376104.7
CDS CCA 90 bp TCGGTCAGTATCTTATGGCCCACCTGTCTTCTTGACTGGCATTCTTaGGTCTTTCCACTGCCACAGGAGTCAATATCTCTTTTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: SVSILWPTCLLDWHS*VFPLPQESISLFRS
Trigger: AGACCTGAAAAGAGATATTGACTCCTGTGGCAGTGGAAAGACCCAAGAATGCCAGTCAAGAAGACAGGTGGGCCATAAGATACTGACCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376104.7
CDS CCA 90 bp CTCAGAGCTACGAAGGTCACATTGGCTGTCAAAGGACATGTCTTCTaGCTAGAAGAAGCCCTGGTGAAATCTTATGTGATATCGGCACCA +
Preference number: 5 (lower is better)
Translates to: LRATKVTLAVKGHVF*LEEALVKSYVISAP
Trigger: TGGTGCCGATATCACATAAGATTTCACCAGGGCTTCTTCTAGCCAGAAGACATGTCCTTTGACAGCCAATGTGACCTTCGTAGCTCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434967.1
CDS-3UTR CAA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTCGCAAGATACAATCATaGACCCTGAGTCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLRKIQS*TLSLPS
Trigger: GGATGGCAGACTCAGGGTCAATGATTGTATCTTGCG...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAAGTCTCCAGGAATGTGTaGGTTCCCCACACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKVSRNV*VPHTSC
Trigger: GCAGGAGGTGTGGGGAACCAACACATTCCTGGAGAC...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATGTCTCCAGGAATGTGTaGGTTCCCCACACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHVSRNV*VPHTSC
Trigger: GCAGGAGGTGTGGGGAACCAACACATTCCTGGAGAC...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGTCTAAAGTGCCATTGTaGCCAGAGAGTAGATGGTTT +
Preference number: 5 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKSKVPL*PESRWF
Trigger: AAACCATCTACTCTCTGGCAACAATGGCACTTTAGA...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTATTCTAAAGTGCCATaGTTGCCAGAGAGTAGATGG +
Preference number: 5 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLYSKVP*LPESRW
Trigger: CCATCTACTCTCTGGCAACAATGGCACTTTAGAATA...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGCAACAAGCATGTGCTTaGGAATTGGTGAGTACCTTC +
Preference number: 5 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLQQACA*ELVSTF
Trigger: GAAGGTACTCACCAATTCCAAAGCACATGCTTGTTG...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GTAGCAATGCCTCAAATCCTTTTCATGGTAGGAGATAGCTCAGGGGTATCTCCTGAGAGGAGGAAGCTTTaGTCACACTCAACAGGGGAA +
Preference number: 5 (lower is better)
Translates to: VAMPQILFMVGDSSGVSPERRKL*SHSTGE
Trigger: TTCCCCTGTTGAGTGTGACAAAAGCTTCCTCCTCTC...AGGAGATACCCCTGAGCTATCTCCTACCATGAAAAGGATTTGAGGCATTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp AGGAGAACCCAGGGTTTTACATCAAAATGGGTGAAGCAGAGGGATACTCCTTGTAGTTGCGGTGCTATGTaGGGAATGACTGGTCATCTC +
Preference number: 5 (lower is better)
Translates to: RRTQGFTSKWVKQRDTPCSCGAM*GMTGHL
Trigger: GAGATGACCAGTCATTCCCAACATAGCACCGCAACT...ACAAGGAGTATCCCTCTGCTTCACCCATTTTGATGTAAAACCCTGGGTTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGTTGAAGGCTGACGAGTaGCGGTGCTATGTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGLKADE*RCYVGN
Trigger: ATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAA...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCATCTTCAGGTTGATATaGTGCTATAATCGTCACTGT +
Preference number: 5 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSIFRLI*CYNRHC
Trigger: ACAGTGACGATTATAGCACAATATCAACCTGAAGAT...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTAGCGTAATCTTCAGGTaGATATTGTGCTATAATCGT +
Preference number: 5 (lower is better)
Translates to: EEALISSLGQKARQRFIPSVIFR*ILCYNR
Trigger: ACGATTATAGCACAATATCAACCTGAAGATTACGCT...AGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCTCTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTAGCGTAATCTTCAGGTaGATATTGTGCTATAATCGT +
Preference number: 5 (lower is better)
Translates to: ALQLNQLWTSAGVRRLSSSVIFR*ILCYNR
Trigger: ACGATTATAGCACAATATCAACCTGAAGATTACGCT...AGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTTTTAAAACTAAGTCCTaGACTTGGCAGCCCACTGTC +
Preference number: 5 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFFKTKS*TWQPTV
Trigger: GACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAAA...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTTTTAAAACTAAGTCCTaGACTTGGCAGCCCACTGTC +
Preference number: 5 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLFKTKS*TWQPTV
Trigger: GACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAAA...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCTTTAAAACTAAGTCCTaGACTTGGCAGCCCACTGTC +
Preference number: 5 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFFKTKS*TWQPTV
Trigger: GACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAAA...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTTCCACCCTCCTTTaGCTGGGGATGACCCCCATC +
Preference number: 5 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEILSTLL*LGMTPI
Trigger: GATGGGGGTCATCCCCAGCAAAAGGAGGGTGGAAAG...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATCTTTCCACCCTCCTTTaGCTGGGGATGACCCCCATC +
Preference number: 5 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHLSTLL*LGMTPI
Trigger: GATGGGGGTCATCCCCAGCAAAAGGAGGGTGGAAAG...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCTCAATCACTCCAGGTTaGGCATTAAACTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: RQRFIPTPGTLSKPKPSFSITPG*ALNFTV
Trigger: GACAGTGAAGTTTAATGCCAAACCTGGAGTGATTGA...GAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTTTTTACGCTTGTCATaGAATGACCCTTTCGAATCA +
Preference number: 5 (lower is better)
Translates to: GSHLISWAESPSEVHPYTFLRLS*NDPFES
Trigger: TGATTCGAAAGGGTCATTCAATGACAAGCGTAAAAA...GGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCGGCTTCTATAAACTaGTGCTCTTGGATATCTTTC +
Preference number: 5 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKPASIN*CSWISF
Trigger: GAAAGATATCCAAGAGCACAAGTTTATAGAAGCCGG...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCCCATATAAATTGTCATaGTACTGGCCGGCTTCTATA +
Preference number: 5 (lower is better)
Translates to: ESPSEVHPYTWHFEQTKAPYKLS*YWPASI
Trigger: TATAGAAGCCGGCCAGTACAATGACAATTTATATGG...GGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCCTGGTTCCATATAAATaGTCATTGTACTGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFLVPYK*SLYWPA
Trigger: AGCCGGCCAGTACAATGACAATTTATATGGAACCAG...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTGGTTCCATATAAATaGTCATTGTACTGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: PSFILQCLFCPTLWPLCFLVPYK*SLYWPA
Trigger: AGCCGGCCAGTACAATGACAATTTATATGGAACCAG...GAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCCCTACACCTGGCACTTaGAGCAAACCAAAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFPTPGT*SKPKPS
Trigger: GGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCCTCTCATCTCATCTCTaGGGCAGAAAGCCCGTCAGA +
Preference number: 5 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFLSSHL*GRKPVR
Trigger: TCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAG...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCATCACTCTGATGGCTCTATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTAAGTTATTCAACTATTaGCATGGCAGGCTCAGGTTA +
Preference number: 5 (lower is better)
Translates to: PITLMALSLALLPSLHAGKLFNY*HGRLRL
Trigger: TAACCTGAGCCTGCCATGCAAATAGTTGAATAACTT...ACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATAGAGCCATCAGAGTGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTAGGAACAGATCTCTCATaGGCTCTAGTACCATCTCTG +
Preference number: 5 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVGTDLS*ALVPSL
Trigger: CAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCC...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGAGAAAGGCAGTTCAGTaGGTTGAGCTCAAAGTCATT +
Preference number: 5 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKRKAVQ*VELKVI
Trigger: AATGACTTTGAGCTCAACCAACTGAACTGCCTTTCT...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTCTCTCACCAATTTGCTaGGTGATTCTTCAAGCAAAT +
Preference number: 5 (lower is better)
Translates to: ALISSLGQKARQRFIPTPLSPIC*VILQAN
Trigger: ATTTGCTTGAAGAATCACCAAGCAAATTGGTGAGAG...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGACCCTCTCACCAATTaGCTTGGTGATTCTTCAAGC +
Preference number: 5 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTDPLTN*LGDSSS
Trigger: GCTTGAAGAATCACCAAGCAAATTGGTGAGAGGGTC...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GTGAGGAGGCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCTACAAGTCATCAGATTaGCTGCAAAATACACCAGTT +
Preference number: 5 (lower is better)
Translates to: VRRLSSHLLGRKPVRGSSYKSSD*LQNTPV
Trigger: AACTGGTGTATTTTGCAGCAAATCTGATGACTTGTA...GGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGCCTCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTGTCTCGAGCCAGAGGTaGGAGAGTTCTTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFVSSQR*ESSFLA
Trigger: AGCCAGGAAAGAACTCTCCAACCTCTGGCTCGAGAC...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTAGGATATTTACAGACTaGAGTGTGTGTGTGTGTTTC +
Preference number: 5 (lower is better)
Translates to: ALISSLGQKARQRFIPTPRIFTD*SVCVCF
Trigger: GAAACACACACACACACTCAAGTCTGTAAATATCCT...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCCGCCTGTCTTAGCTTaGTCCTCAGCTGTTACAAGA +
Preference number: 5 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGPPVLA*SSAVTR
Trigger: TCTTGTAACAGCTGAGGACAAAGCTAAGACAGGCGG...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTAGCATCTGCCTTGGTTTaGAGTTGTCGTCTCATCAGT +
Preference number: 5 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVASALV*SCRLIS
Trigger: ACTGATGAGACGACAACTCAAAACCAAGGCAGATGC...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR CAA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTTGGAGCGTCCTCATCTaGATATCGATACTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLWSVLI*ISILLH
Trigger: GTGAAGAAGTATCGATATCAAGATGAGGACGCTCCA...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398309.6
ENST00000524982.5
CDS-3UTR CAA 90 bp CCAAGCATTGAAGAGCAGCCAGAACGGAAAGGAATACACTCATGCAAGGCTACCTCGAGCACAAAATTATaGGAACAAAGCAGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PSIEEQPERKGIHSCKATSSTKL*EQSREE
Trigger: CTCCTCCCTGCTTTGTTCCAATAATTTTGTGCTCGA...GGTAGCCTTGCATGAGTGTATTCCTTTCCGTTCTGGCTGCTCTTCAATGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR CAA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCCATGTTTCAGAGTCTTaGTTCCATAACCGTCGTCAC +
Preference number: 5 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGHVSES*FHNRRH
Trigger: GTGACGACGGTTATGGAACAAAGACTCTGAAACATG...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404783.7
ENST00000524982.5
CDS-3UTR CAA 90 bp GGACTGAACATCAAACTCCAGCCATTGGATTGTAGGGCTTTTAAGCTACCTAATAGACAAGACATTTCTTaGCCACCGCTGGCCACCCCT +
Preference number: 5 (lower is better)
Translates to: GLNIKLQPLDCRAFKLPNRQDIS*PPLATP
Trigger: AGGGGTGGCCAGCGGTGGCAAAGAAATGTCTTGTCT...ATTAGGTAGCTTAAAAGCCCTACAATCCAATGGCTGGAGTTTGATGTTCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS CCA 90 bp CAACAAGCATGTGCTTTGGAATTGGTGAGTACCTTCCTGGAGAGATaGGTGGCAGGGAGGTTTTATATTCTAAAGTGCCATTGTTGCCAG +
Preference number: 5 (lower is better)
Translates to: QQACALELVSTFLER*VAGRFYILKCHCCQ
Trigger: CTGGCAACAATGGCACTTTAGAATATAAAACCTCCCTGCCACCCATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCACATGCTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CCA 90 bp CTGAGAGGAGGAAGCTTTTGTCACACTCAACAGGGGAATAGTGCCTaGGAGAAGCAGGCTTATCACATAGTTTGTTCACAGTGCTGTAAA +
Preference number: 5 (lower is better)
Translates to: LRGGSFCHTQQGNSA*EKQAYHIVCSQCCK
Trigger: TTTACAGCACTGTGAACAAACTATGTGATAAGCCTGCTTCTCCCAGGCACTATTCCCCTGTTGAGTGTGACAAAAGCTTCCTCCTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CCA 90 bp ATGCACAGGCAATCCATCCTGGATCCCTACACAGGACTCAGTACATaGAAATCACACCAGCAAATCAGCAAAGGTGAGAAAAGCCTTTTG +
Preference number: 5 (lower is better)
Translates to: MHRQSILDPYTGLST*KSHQQISKGEKSLL
Trigger: CAAAAGGCTTTTCTCACCTTTGCTGATTTGCTGGTGTGATTTCCATGTACTGAGTCCTGTGTAGGGATCCAGGATGGATTGCCTGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527088.1
CDS-3UTR CAA 90 bp AGCAGAGGGATACTCCTTGTATATGAAACAGATATTAGGGATTCTCAACAGGAAGTCTCCAGGAATGTGTaGGTTCCCCACACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SRGILLVYETDIRDSQQEVSRNV*VPHTSC
Trigger: GCAGGAGGTGTGGGGAACCAACACATTCCTGGAGAC...TTCCTGTTGAGAATCCCTAATATCTGTTTCATATACAAGGAGTATCCCTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCGTAGATGGTTTTCCATaGGTGGAGAATAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGVDGFP*VENKSE
Trigger: CTCACTCTTATTCTCCACCAATGGAAAACCATCTAC...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTCTAAAGTGCCATTGTaGCCAGAGAGTAGATGGTTT +
Preference number: 5 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLSKVPL*PESRWF
Trigger: AAACCATCTACTCTCTGGCAACAATGGCACTTTAGA...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCTCTAAAGTGCCATTGTaGCCAGAGAGTAGATGGTTT +
Preference number: 5 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFSKVPL*PESRWF
Trigger: AAACCATCTACTCTCTGGCAACAATGGCACTTTAGA...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTTCTAAAGTGCCATTGTaGCCAGAGAGTAGATGGTTT +
Preference number: 5 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVSKVPL*PESRWF
Trigger: AAACCATCTACTCTCTGGCAACAATGGCACTTTAGA...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTTCTAAAGTGCCATTGTaGCCAGAGAGTAGATGGTTT +
Preference number: 5 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLSKVPL*PESRWF
Trigger: AAACCATCTACTCTCTGGCAACAATGGCACTTTAGA...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCGCATGTGCTTTGGAATaGGTGAGTACCTTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFACALE*VSTFLE
Trigger: CTCCAGGAAGGTACTCACCAATTCCAAAGCACATGC...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACAACAAGCATGTGCTTaGGAATTGGTGAGTACCTTC +
Preference number: 5 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVQQACA*ELVSTF
Trigger: GAAGGTACTCACCAATTCCAAAGCACATGCTTGTTG...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTCAACAAGCATGTGCTTaGGAATTGGTGAGTACCTTC +
Preference number: 5 (lower is better)
Translates to: PITDVGNGKADEVRVLAIQQACA*ELVSTF
Trigger: GAAGGTACTCACCAATTCCAAAGCACATGCTTGTTG...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCGAGAGGAGGAAGCTTTaGTCACACTCAACAGGGGAA +
Preference number: 5 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTERRKL*SHSTGE
Trigger: TTCCCCTGTTGAGTGTGACAAAAGCTTCCTCCTCTC...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTCCCGTTGGAGAGTCATaGAAGGCTGACGAGTTGCGG +
Preference number: 5 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILPVGES*KADELR
Trigger: CCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGG...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTACACCAGGCCCAGAACCCTCAGCGTAATCTTCAGGTaGATATTGTGCTATAATCGT +
Preference number: 5 (lower is better)
Translates to: GILNRKVLGHKYTRPRTLSVIFR*ILCYNR
Trigger: ACGATTATAGCACAATATCAACCTGAAGATTACGCT...GAGGGTTCTGGGCCTGGTGTACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTATTTAAAACTAAGTCCTaGACTTGGCAGCCCACTGTC +
Preference number: 5 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVFKTKS*TWQPTV
Trigger: GACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAAA...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACTCAATCACTCCAGGTTaGGCATTAAACTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYSITPG*ALNFTV
Trigger: GACAGTGAAGTTTAATGCCAAACCTGGAGTGATTGA...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTTCAATCACTCCAGGTTaGGCATTAAACTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVSITPG*ALNFTV
Trigger: GACAGTGAAGTTTAATGCCAAACCTGGAGTGATTGA...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTCAATCACTCCAGGTTaGGCATTAAACTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGSITPG*ALNFTV
Trigger: GACAGTGAAGTTTAATGCCAAACCTGGAGTGATTGA...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCAATGCCTCAAATCCTTTTCATGGTAGGAGATAGCTCAGGGGTATCTCCTGCCTCAATCACTCCAGGTTaGGCATTAAACTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: AMPQILFMVGDSSGVSPASITPG*ALNFTV
Trigger: GACAGTGAAGTTTAATGCCAAACCTGGAGTGATTGA...GGCAGGAGATACCCCTGAGCTATCTCCTACCATGAAAAGGATTTGAGGCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp TATCTCTTGCTCTCCTACCCAGCCTACATGCTGGTTTGCTGCACAGTGTGGCAGTTTTTACGCTTGTCATaGAATGACCCTTTCGAATCA +
Preference number: 5 (lower is better)
Translates to: YLLLSYPAYMLVCCTVWQFLRLS*NDPFES
Trigger: TGATTCGAAAGGGTCATTCAATGACAAGCGTAAAAA...CTGCCACACTGTGCAGCAAACCAGCATGTAGGCTGGGTAGGAGAGCAAGAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATTTTTTACGCTTGTCATaGAATGACCCTTTCGAATCA +
Preference number: 5 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHFLRLS*NDPFES
Trigger: TGATTCGAAAGGGTCATTCAATGACAAGCGTAAAAA...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGCCGGCTTCTATAAACTaGTGCTCTTGGATATCTTTC +
Preference number: 5 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKPASIN*CSWISF
Trigger: GAAAGATATCCAAGAGCACAAGTTTATAGAAGCCGG...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCCCATATAAATTGTCATaGTACTGGCCGGCTTCTATA +
Preference number: 5 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLPYKLS*YWPASI
Trigger: TATAGAAGCCGGCCAGTACAATGACAATTTATATGG...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACTGGTTCCATATAAATaGTCATTGTACTGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVLVPYK*SLYWPA
Trigger: AGCCGGCCAGTACAATGACAATTTATATGGAACCAG...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CTGCAGCTAAATCAGCTCTGGACATCTGCTGGGGTGAGGAGGCTCTCATCTCATTCAAGTATACAGTGTTaGCCTCTTTCTGCTACAAAT +
Preference number: 5 (lower is better)
Translates to: LQLNQLWTSAGVRRLSSHSSIQC*PLSATN
Trigger: ATTTGTAGCAGAAAGAGGCAAACACTGTATACTTGA...ATGAGATGAGAGCCTCCTCACCCCAGCAGATGTCCAGAGCTGATTTAGCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCGCAACTTGTAACCGCTaGATAGCATTTCCTGATACA +
Preference number: 5 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGATCNR*IAFPDT
Trigger: TGTATCAGGAAATGCTATCAAGCGGTTACAAGTTGC...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTCTCATCTCATCTCTaGGGCAGAAAGCCCGTCAGA +
Preference number: 5 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFLSSHL*GRKPVR
Trigger: TCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAG...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCAAGTTATTCAACTATTaGCATGGCAGGCTCAGGTTA +
Preference number: 5 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLKLFNY*HGRLRL
Trigger: TAACCTGAGCCTGCCATGCAAATAGTTGAATAACTT...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CAGAAAGCCCGTCAGAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGAGGCAGTTCAGTTGGTaGAGCTCAAAGTCATTAATT +
Preference number: 5 (lower is better)
Translates to: QKARQRFIPTPGTLSKPKRQFSW*SSKSLI
Trigger: AATTAATGACTTTGAGCTCAACCAACTGAACTGCCT...CTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTCTGACGGGCTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCAGAAAGGCAGTTCAGTaGGTTGAGCTCAAAGTCATT +
Preference number: 5 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFRKAVQ*VELKVI
Trigger: AATGACTTTGAGCTCAACCAACTGAACTGCCTTTCT...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGAGAAAGGCAGTTCAGTaGGTTGAGCTCAAAGTCATT +
Preference number: 5 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLRKAVQ*VELKVI
Trigger: AATGACTTTGAGCTCAACCAACTGAACTGCCTTTCT...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTGAGAGGGAGAATGCATaGCTAGCCCTTCCATTGGCA +
Preference number: 5 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPERENA*LALPLA
Trigger: TGCCAATGGAAGGGCTAGCAATGCATTCTCCCTCTC...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTCCTGAAACTGGCGAATaGCAGACATGGACATATCTT +
Preference number: 5 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSPETGE*QTWTYL
Trigger: AAGATATGTCCATGTCTGCAATTCGCCAGTTTCAGG...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACTTCTGGGAGCAATATaGATGAAAGTAGGCCTTGAC +
Preference number: 5 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVLLGAI*MKVGLD
Trigger: GTCAAGGCCTACTTTCATCAATATTGCTCCCAGAAG...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTGGTTGGTGGTTCAATTaGATTGTACTTAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: PITDVGNGKADEVRVLAIGWWFN*IVLSHS
Trigger: GCTGTGGCTAAGTACAATCAAATTGAACCACCAACC...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATAGGTTGGTGGTTCAATTaGATTGTACTTAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFIGWWFN*IVLSHS
Trigger: GCTGTGGCTAAGTACAATCAAATTGAACCACCAACC...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GCTCTCATCTCATCTCTTGGGCAGAAAGCCCGTCAGAGGTTCATCCCTACACCTTACAAGTCATCAGATTaGCTGCAAAATACACCAGTT +
Preference number: 5 (lower is better)
Translates to: ALISSLGQKARQRFIPTPYKSSD*LQNTPV
Trigger: AACTGGTGTATTTTGCAGCAAATCTGATGACTTGTA...AGGTGTAGGGATGAACCTCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAATGTGTGAAGGTGACATaGCACCCCCAGCAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKCVKVT*HPQQAF
Trigger: GAAGGCTTGCTGGGGGTGCAATGTCACCTTCACACA...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACAATGGAATTTTGATTTaGGTAAAGCTGAGACCCCCG +
Preference number: 5 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYNGILI*VKLRPP
Trigger: CGGGGGTCTCAGCTTTACCAAAATCAAAATTCCATT...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTAATGGAATTTTGATTTaGGTAAAGCTGAGACCCCCG +
Preference number: 5 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLNGILI*VKLRPP
Trigger: CGGGGGTCTCAGCTTTACCAAAATCAAAATTCCATT...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAAGTCTCGAGCCAGAGGTaGGAGAGTTCTTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKVSSQR*ESSFLA
Trigger: AGCCAGGAAAGAACTCTCCAACCTCTGGCTCGAGAC...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTGTCCAGTGCATGGACTaGCTGTCTGAATCAGCCATG +
Preference number: 5 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFVQCMD*LSESAM
Trigger: CATGGCTGATTCAGACAGCAAGTCCATGCACTGGAC...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATGCTTCAAGGGAATaGATCTTTTTCCCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLHASRE*IFFPLG
Trigger: TCCTAGAGGGAAAAAGATCAATTCCCTTGAAGCATG...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCTCGAGCACAAAATTATaGGAACAAAGCAGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPSSTKL*EQSREE
Trigger: CTCCTCCCTGCTTTGTTCCAATAATTTTGTGCTCGA...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404783.7
ENST00000426717.6
CDS-3UTR CAA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTCATGTTTCAGAGTCTTaGTTCCATAACCGTCGTCAC +
Preference number: 5 (lower is better)
Translates to: PITDVGNGKADEVRVLAIHVSES*FHNRRH
Trigger: GTGACGACGGTTATGGAACAAAGACTCTGAAACATG...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404783.7
CDS-3UTR CAA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTAAAGAATGAGGTCTTCTaGTCCTCGGTAGCTACTTTC +
Preference number: 5 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVKNEVF*SSVATF
Trigger: GAAAGTAGCTACCGAGGACAAGAAGACCTCATTCTT...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404783.7
ENST00000524982.5
CDS-3UTR CAA 90 bp ATCAAACTCCAGCCATTGGATTGTAGGGCTTTTAAGCTACCTAATGAGGGAAACCTACTCAATGGGCACTaGATGCAGGATGAGTTGGCG +
Preference number: 5 (lower is better)
Translates to: IKLQPLDCRAFKLPNEGNLLNGH*MQDELA
Trigger: CGCCAACTCATCCTGCATCAAGTGCCCATTGAGTAG...GTTTCCCTCATTAGGTAGCTTAAAAGCCCTACAATCCAATGGCTGGAGTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR CAA 90 bp GGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTACACCAGGCCCAGAACCCTCTGGACACTGACCATTTaGAGCCCTAAAATTTTGTTT +
Preference number: 5 (lower is better)
Translates to: GILNRKVLGHKYTRPRTLWTLTI*SPKILF
Trigger: AAACAAAATTTTAGGGCTCAAAATGGTCAGTGTCCA...GAGGGTTCTGGGCCTGGTGTACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTGGAGCGTCCTCATCTaGATATCGATACTTCTTGCA +
Preference number: 5 (lower is better)
Translates to: PITDVGNGKADEVRVLAIWSVLI*ISILLA
Trigger: TGCAAGAAGTATCGATATCAAGATGAGGACGCTCCA...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS TCA 90 bp AGGAGTCAATATCTCTTTTCAGGTCTCAGTTTGATCCAGCTGGATTaGGGCCAAGAGCCAGGTAACTGTTGCAAACCACTTCAGTGTTCA +
Preference number: 5 (lower is better)
Translates to: RSQYLFSGLSLIQLD*GQEPGNCCKPLQCS
Trigger: TGAACACTGAAGTGGTTTGCAACAGTTACCTGGCTCTTGGCCTCAATCCAGCTGGATCAAACTGAGACCTGAAAAGAGATATTGACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376104.7
ENST00000472545.6
ENST00000526147.1
ENST00000650630.1
CDS GCA 90 bp ACCTTCCTGGAGAGATGGGTGGCAGGGAGGTTTTATATTCTAAAGTaGCATTGTTGCCAGAGAGTAGATGGTTTTCCATTGGTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: TFLERWVAGRFYILK*HCCQRVDGFPLVEN
Trigger: ATTCTCCACCAATGGAAAACCATCTACTCTCTGGCAACAATGGCACTTTAGAATATAAAACCTCCCTGCCACCCATCTCTCCAGGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CCA 90 bp AAGGATATGACCTCAGGCTGGAGTCAGATTGAATTCAGGCCAGAGTaGGGAGTGGAGAATACAATAAGAATGGGCATGGTTCTTCCATAT +
Preference number: 5 (lower is better)
Translates to: KDMTSGWSQIEFRPE*GVENTIRMGMVLPY
Trigger: ATATGGAAGAACCATGCCCATTCTTATTGTATTCTCCACTCCCCACTCTGGCCTGAATTCAATCTGACTCCAGCCTGAGGTCATATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529111.5
CDS CCA 90 bp TACGTCATGCCTAAAATTTCAGGTAAGAAGGATATGACCTCAGGCTaGAGTCAGATTGAATTCAGGCCAGAGTGGGGAGTGGAGAATACA +
Preference number: 5 (lower is better)
Translates to: YVMPKISGKKDMTSG*SQIEFRPEWGVENT
Trigger: TGTATTCTCCACTCCCCACTCTGGCCTGAATTCAATCTGACTCCAGCCTGAGGTCATATCCTTCTTACCTGAAATTTTAGGCATGACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529111.5
CDS CCA 90 bp TTGGTCCAAATTCTAACTACATCTGCTGGAATAAGTAACACTGCCTaGGACTCAGTCTTCAGTTTCCTCACCTTCACGTTAGTCCGGAGT +
Preference number: 5 (lower is better)
Translates to: LVQILTTSAGISNTA*DSVFSFLTFTLVRS
Trigger: ACTCCGGACTAACGTGAAGGTGAGGAAACTGAAGACTGAGTCCCAGGCAGTGTTACTTATTCCAGCAGATGTAGTTAGAATTTGGACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530589.1
CDS-3UTR CAA 90 bp GACAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATCCGGCTGCAGCTGTGTaGCTTGGTGAGGTATGCATT +
Preference number: 5 (lower is better)
Translates to: DNTTNGGVNSIGKDPLTNPAAAV*LGEVCI
Trigger: AATGCATACCTCACCAAGCAACACAGCTGCAGCCGG...ATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR CAA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAACCCTTGGTGCTCGTCTaGTGGGGGCTTTTCCGCACA +
Preference number: 5 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKPLVLV*WGLFRT
Trigger: TGTGCGGAAAAGCCCCCACAAGACGAGCACCAAGGG...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTTCCAAAGTATCTGTGTaGACAATTATAGGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVSKVSV*TIIGAG
Trigger: TCCTGCTCCTATAATTGTCAACACAGATACTTTGGA...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTTCCAAAGTATCTGTGTaGACAATTATAGGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLSKVSV*TIIGAG
Trigger: TCCTGCTCCTATAATTGTCAACACAGATACTTTGGA...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCGGGCCTTTGAACAGTTaGATTTCCACAACGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFGPLNS*ISTTVS
Trigger: GGAGACCGTTGTGGAAATCAAACTGTTCAAAGGCCC...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACAGTCTCCAGGAATGTGTaGGTTCCCCACACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTVSRNV*VPHTSC
Trigger: GCAGGAGGTGTGGGGAACCAACACATTCCTGGAGAC...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTCAACCTTCCATCTTTTaGTGCAGCTCCTCCATCTAT +
Preference number: 5 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLQPSIF*CSSSIY
Trigger: ATAGATGGAGGAGCTGCACAAAAAGATGGAAGGTTG...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTATATTCTAAAGTGCCATaGTTGCCAGAGAGTAGATGG +
Preference number: 5 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVYSKVP*LPESRW
Trigger: CCATCTACTCTCTGGCAACAATGGCACTTTAGAATA...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CGGACGCCTCCAAGCTTCTTCTCAAGAGTAACTGCTTTGGACACTGACCATTTTTATTCTAAAGTGCCATaGTTGCCAGAGAGTAGATGG +
Preference number: 5 (lower is better)
Translates to: RTPPSFFSRVTALDTDHFYSKVP*LPESRW
Trigger: CCATCTACTCTCTGGCAACAATGGCACTTTAGAATA...AAAATGGTCAGTGTCCAAAGCAGTTACTCTTGAGAAGAAGCTTGGAGGCGTCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTGCATGTGCTTTGGAATaGGTGAGTACCTTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFACALE*VSTFLE
Trigger: CTCCAGGAAGGTACTCACCAATTCCAAAGCACATGC...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAGGTAACAAAGCCACGGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACAGTTGCGGTGCTATGTaGGGAATGACTGGTCATCTC +
Preference number: 5 (lower is better)
Translates to: EVTKPRFTFFGHEPSIFHSCGAM*GMTGHL
Trigger: GAGATGACCAGTCATTCCCAACATAGCACCGCAACT...GTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACCGTGGCTTTGTTACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp GAGGTAACAAAGCCACGGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTTGAAGGCTGACGAGTaGCGGTGCTATGTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: EVTKPRFTFFGHEPSIFHLKADE*RCYVGN
Trigger: ATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAA...GTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACCGTGGCTTTGTTACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTGAAGGCTGACGAGTaGCGGTGCTATGTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFLKADE*RCYVGN
Trigger: ATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAA...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAATTGAAGGCTGACGAGTaGCGGTGCTATGTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKLKADE*RCYVGN
Trigger: ATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAA...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACATTGTGCAGGACTACCTaGCGAGGCTCTCCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTLCRTT*RGSPSR
Trigger: CCTGGAAGGAGAGCCTCGCAAGGTAGTCCTGCACAA...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp CAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTTAGGCCAGTGGAGCCTTaGTGCAGGACTACCTTGCGA +
Preference number: 5 (lower is better)
Translates to: QHNKWRCKFYWKRPSHQFRPVEP*CRTTLR
Trigger: TCGCAAGGTAGTCCTGCACAAAGGCTCCACTGGCCT...AAATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CAA 90 bp CAAATCCTTTTCATGGTAGGAGATAGCTCAGGGGTATCTCCTGCCCATGGTTTTTTTAAAACTAAGTCCTaGACTTGGCAGCCCACTGTC +
Preference number: 5 (lower is better)
Translates to: QILFMVGDSSGVSPAHGFFKTKS*TWQPTV
Trigger: GACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAAA...AAAACCATGGGCAGGAGATACCCCTGAGCTATCTCCTACCATGAAAAGGATTTG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTCAATCACTCCAGGTTaGGCATTAAACTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: PITDVGNGKADEVRVLAISITPG*ALNFTV
Trigger: GACAGTGAAGTTTAATGCCAAACCTGGAGTGATTGA...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TGTGAGCGAAAGGCAAGTAAAAGCCGCAGAGGAGGCTGCATTAAGAAAACTCAGTCAATCACTCCAGGTTaGGCATTAAACTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: CERKASKSRRGGCIKKTQSITPG*ALNFTV
Trigger: GACAGTGAAGTTTAATGCCAAACCTGGAGTGATTGA...CTGAGTTTTCTTAATGCAGCCTCCTCTGCGGCTTTTACTTGCCTTTCGCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR CAA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTCCGGCTTCTATAAACTaGTGCTCTTGGATATCTTTC +
Preference number: 5 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSPASIN*CSWISF
Trigger: GAAAGATATCCAAGAGCACAAGTTTATAGAAGCCGG...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCCCATATAAATTGTCATaGTACTGGCCGGCTTCTATA +
Preference number: 5 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFPYKLS*YWPASI
Trigger: TATAGAAGCCGGCCAGTACAATGACAATTTATATGG...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAACTTGTAACCGCTaGATAGCATTTCCTGATACA +
Preference number: 5 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTATCNR*IAFPDT
Trigger: TGTATCAGGAAATGCTATCAAGCGGTTACAAGTTGC...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCGCAACTTGTAACCGCTaGATAGCATTTCCTGATACA +
Preference number: 5 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPATCNR*IAFPDT
Trigger: TGTATCAGGAAATGCTATCAAGCGGTTACAAGTTGC...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTAGCAACTTGTAACCGCTaGATAGCATTTCCTGATACA +
Preference number: 5 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVATCNR*IAFPDT
Trigger: TGTATCAGGAAATGCTATCAAGCGGTTACAAGTTGC...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTCTCTCATCTCATCTCTaGGGCAGAAAGCCCGTCAGA +
Preference number: 5 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSLSSHL*GRKPVR
Trigger: TCTGACGGGCTTTCTGCCCAAGAGATGAGATGAGAG...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGGTGAGGAAGAAGTCTTaGTCAGACTTAAAAGGAACT +
Preference number: 5 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKVRKKS*SDLKGT
Trigger: AGTTCCTTTTAAGTCTGACAAAGACTTCTTCCTCAC...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGGTGAGGAAGAAGTCTTaGTCAGACTTAAAAGGAACT +
Preference number: 5 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLVRKKS*SDLKGT
Trigger: AGTTCCTTTTAAGTCTGACAAAGACTTCTTCCTCAC...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCCCTAATTACTCATTGTaGGCCAAAATGCTAAATGGT +
Preference number: 5 (lower is better)
Translates to: PKPSFILQCLFCPTLWPLPNYSL*AKMLNG
Trigger: ACCATTTAGCATTTTGGCCAACAATGAGTAATTAGG...GAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCAGGCAGTTCAGTTGGTaGAGCTCAAAGTCATTAATT +
Preference number: 5 (lower is better)
Translates to: ILQCLFCPTLWPLCFLHGRQFSW*SSKSLI
Trigger: AATTAATGACTTTGAGCTCAACCAACTGAACTGCCT...GCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTAGAAAGGCAGTTCAGTaGGTTGAGCTCAAAGTCATT +
Preference number: 5 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSRKAVQ*VELKVI
Trigger: AATGACTTTGAGCTCAACCAACTGAACTGCCTTTCT...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTGAGAGGGAGAATGCATaGCTAGCCCTTCCATTGGCA +
Preference number: 5 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEIERENA*LALPLA
Trigger: TGCCAATGGAAGGGCTAGCAATGCATTCTCCCTCTC...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCCTACAAAACCAAGGGTaGGTGGTTCAATTTGATTGT +
Preference number: 5 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFLQNQG*VVQFDC
Trigger: ACAATCAAATTGAACCACCAACCCTTGGTTTTGTAG...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGCTACAAAACCAAGGGTaGGTGGTTCAATTTGATTGT +
Preference number: 5 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKLQNQG*VVQFDC
Trigger: ACAATCAAATTGAACCACCAACCCTTGGTTTTGTAG...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACCTCTCACCAATTTGCTaGGTGATTCTTCAAGCAAAT +
Preference number: 5 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYLSPIC*VILQAN
Trigger: ATTTGCTTGAAGAATCACCAAGCAAATTGGTGAGAG...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCGACCCTCTCACCAATTaGCTTGGTGATTCTTCAAGC +
Preference number: 5 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFDPLTN*LGDSSS
Trigger: GCTTGAAGAATCACCAAGCAAATTGGTGAGAGGGTC...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GTTTGCTATCAGAATAATTGGGGCCAGAGTCTGCCTTTATTGAAAGAAAATGTCTGTGTGAAGGTGACATaGCACCCCCAGCAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: VCYQNNWGQSLPLLKENVCVKVT*HPQQAF
Trigger: GAAGGCTTGCTGGGGGTGCAATGTCACCTTCACACA...GACATTTTCTTTCAATAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCAATGGAATTTTGATTTaGGTAAAGCTGAGACCCCCG +
Preference number: 5 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPNGILI*VKLRPP
Trigger: CGGGGGTCTCAGCTTTACCAAAATCAAAATTCCATT...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAAGTCCAGTGCATGGACTaGCTGTCTGAATCAGCCATG +
Preference number: 5 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKVQCMD*LSESAM
Trigger: CATGGCTGATTCAGACAGCAAGTCCATGCACTGGAC...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACATGCTTCAAGGGAATaGATCTTTTTCCCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFIHASRE*IFFPLG
Trigger: TCCTAGAGGGAAAAAGATCAATTCCCTTGAAGCATG...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCCGCCTGTCTTAGCTTaGTCCTCAGCTGTTACAAGA +
Preference number: 5 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFPPVLA*SSAVTR
Trigger: TCTTGTAACAGCTGAGGACAAAGCTAAGACAGGCGG...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTAACCTTGCCACTTGGTaGTCTGTCCTCATGAGTTGC +
Preference number: 5 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPNLATW*SVLMSC
Trigger: GCAACTCATGAGGACAGACAACCAAGTGGCAAGGTT...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACCACAAAACTGTCATATaGAAAGGATCTAACGGGTAC +
Preference number: 5 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYHKTVI*KGSNGY
Trigger: GTACCCGTTAGATCCTTTCAATATGACAGTTTTGTG...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCGCATCTGCCTTGGTTTaGAGTTGTCGTCTCATCAGT +
Preference number: 5 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFASALV*SCRLIS
Trigger: ACTGATGAGACGACAACTCAAAACCAAGGCAGATGC...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR CAA 90 bp CAGTTAAAGGAACAACAGCCTTTCACCTGGTGTGGTCAGTGGATTCGCATACAATTGATGCAGGATGAGTaGGCGAAGCAGATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: QLKEQQPFTWCGQWIRIQLMQDE*AKQISS
Trigger: TGAAGAAATCTGCTTCGCCAACTCATCCTGCATCAA...TTGTATGCGAATCCACTGACCACACCAGGTGAAAGGCTGTTGTTCCTTTAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR CAA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTGGTGCAAGCAACTTaGCAGTGGCAAATCATTGGT +
Preference number: 5 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLLVQAT*QWQIIG
Trigger: ACCAATGATTTGCCACTGCAAAGTTGCTTGCACCAA...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR CAA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTAACGATAAAGTGTTGTaGGTGCAAGCAACTTTGCAG +
Preference number: 5 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTNDKVL*VQATLQ
Trigger: CTGCAAAGTTGCTTGCACCAACAACACTTTATCGTT...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS TCA 90 bp GGTGTGGTCAGTGGATTCGCATACAAGGTTTGTAGTTCTTATTTATaGTGTGACAGACCAGTGATCTACTTCGCCATTTCAGCATCCTGG +
Preference number: 5 (lower is better)
Translates to: GVVSGFAYKVCSSYL*CDRPVIYFAISASW
Trigger: CCAGGATGCTGAAATGGCGAAGTAGATCACTGGTCTGTCACATCATAAATAAGAACTACAAACCTTGTATGCGAATCCACTGACCACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530260.5
CDS GCA 90 bp GAGAGATGGGTGGCAGGGAGGTTTTATATTCTAAAGTGCCATTGTTaGCAGAGAGTAGATGGTTTTCCATTGGTGGAGAATAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: ERWVAGRFYILKCHC*QRVDGFPLVENKSE
Trigger: CTCACTCTTATTCTCCACCAATGGAAAACCATCTACTCTCTGGCAACAATGGCACTTTAGAATATAAAACCTCCCTGCCACCCATCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACACCGGCTGCAGCTGTGTaGCTTGGTGAGGTATGCATT +
Preference number: 5 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTPAAAV*LGEVCI
Trigger: AATGCATACCTCACCAAGCAACACAGCTGCAGCCGG...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATATCCAAAGTATCTGTGTaGACAATTATAGGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFISKVSV*TIIGAG
Trigger: TCCTGCTCCTATAATTGTCAACACAGATACTTTGGA...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCAAACCTTTAGGGCCTTaGAACAGTTTGATTTCCACA +
Preference number: 5 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPKPLGP*NSLIST
Trigger: TGTGGAAATCAAACTGTTCAAAGGCCCTAAAGGTTT...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTAAAACCTTTAGGGCCTTaGAACAGTTTGATTTCCACA +
Preference number: 5 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVKPLGP*NSLIST
Trigger: TGTGGAAATCAAACTGTTCAAAGGCCCTAAAGGTTT...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAAGAGAGGAGGAAGCTTTaGTCACACTCAACAGGGGAA +
Preference number: 5 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKERRKL*SHSTGE
Trigger: TTCCCCTGTTGAGTGTGACAAAAGCTTCCTCCTCTC...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTGAGAGGAGGAAGCTTTaGTCACACTCAACAGGGGAA +
Preference number: 5 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEIERRKL*SHSTGE
Trigger: TTCCCCTGTTGAGTGTGACAAAAGCTTCCTCCTCTC...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTTTGAAGGCTGACGAGTaGCGGTGCTATGTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSLKADE*RCYVGN
Trigger: ATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAA...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACCCCGTTGGAGAGTCATaGAAGGCTGACGAGTTGCGG +
Preference number: 5 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNPVGES*KADELR
Trigger: CCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGG...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp AACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATTTAGGCTTGTGCAGGACTACCTaGCGAGGCTCTCCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: NLGISLSPWLKYICRNLGLCRTT*RGSPSR
Trigger: CCTGGAAGGAGAGCCTCGCAAGGTAGTCCTGCACAA...GCCTAAATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CAA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAAAGGCCAGTGGAGCCTTaGTGCAGGACTACCTTGCGA +
Preference number: 5 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKRPVEP*CRTTLR
Trigger: TCGCAAGGTAGTCCTGCACAAAGGCTCCACTGGCCT...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTATCTTCAGGTTGATATaGTGCTATAATCGTCACTGT +
Preference number: 5 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLIFRLI*CYNRHC
Trigger: ACAGTGACGATTATAGCACAATATCAACCTGAAGAT...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTATCTTCAGGTTGATATaGTGCTATAATCGTCACTGT +
Preference number: 5 (lower is better)
Translates to: AFLHTAMSFLSHPLAPLFIFRLI*CYNRHC
Trigger: ACAGTGACGATTATAGCACAATATCAACCTGAAGAT...AAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCAGCGTAATCTTCAGGTaGATATTGTGCTATAATCGT +
Preference number: 5 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFSVIFR*ILCYNR
Trigger: ACGATTATAGCACAATATCAACCTGAAGATTACGCT...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACAGCGTAATCTTCAGGTaGATATTGTGCTATAATCGT +
Preference number: 5 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYSVIFR*ILCYNR
Trigger: ACGATTATAGCACAATATCAACCTGAAGATTACGCT...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTAGCGTAATCTTCAGGTaGATATTGTGCTATAATCGT +
Preference number: 5 (lower is better)
Translates to: LSHPLAPLFPSWLHTVCVSVIFR*ILCYNR
Trigger: ACGATTATAGCACAATATCAACCTGAAGATTACGCT...AACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAACTTTCCACCCTCCTTTaGCTGGGGATGACCCCCATC +
Preference number: 5 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKLSTLL*LGMTPI
Trigger: GATGGGGGTCATCCCCAGCAAAAGGAGGGTGGAAAG...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTCAATCACTCCAGGTTaGGCATTAAACTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLSITPG*ALNFTV
Trigger: GACAGTGAAGTTTAATGCCAAACCTGGAGTGATTGA...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCAATGCCTCAAATCCTTTTCATGGTAGGAGATAGCTCAGGGGTATCTCCTGCCTTTTTACGCTTGTCATaGAATGACCCTTTCGAATCA +
Preference number: 5 (lower is better)
Translates to: AMPQILFMVGDSSGVSPAFLRLS*NDPFES
Trigger: TGATTCGAAAGGGTCATTCAATGACAAGCGTAAAAA...GGCAGGAGATACCCCTGAGCTATCTCCTACCATGAAAAGGATTTGAGGCATTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTCCATATAAATTGTCATaGTACTGGCCGGCTTCTATA +
Preference number: 5 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTPYKLS*YWPASI
Trigger: TATAGAAGCCGGCCAGTACAATGACAATTTATATGG...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACCATATAAATTGTCATaGTACTGGCCGGCTTCTATA +
Preference number: 5 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVPYKLS*YWPASI
Trigger: TATAGAAGCCGGCCAGTACAATGACAATTTATATGG...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTACTCAAGTATACAGTGTTaGCCTCTTTCTGCTACAAAT +
Preference number: 5 (lower is better)
Translates to: PTLWPLCFLHGFIQFVLYSSIQC*PLSATN
Trigger: ATTTGTAGCAGAAAGAGGCAAACACTGTATACTTGA...GTACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCTCAAGTATACAGTGTTaGCCTCTTTCTGCTACAAAT +
Preference number: 5 (lower is better)
Translates to: PSYCNVFSVPPFGPSVSFSSIQC*PLSATN
Trigger: ATTTGTAGCAGAAAGAGGCAAACACTGTATACTTGA...GAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTCAAGTATACAGTGTTaGCCTCTTTCTGCTACAAAT +
Preference number: 5 (lower is better)
Translates to: CPTLWPLCFLHGFIQFVLSSIQC*PLSATN
Trigger: ATTTGTAGCAGAAAGAGGCAAACACTGTATACTTGA...CAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTTCAAGTATACAGTGTTaGCCTCTTTCTGCTACAAAT +
Preference number: 5 (lower is better)
Translates to: TAMSFLSHPLAPLFPSWLSSIQC*PLSATN
Trigger: ATTTGTAGCAGAAAGAGGCAAACACTGTATACTTGA...AAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCAATGCCTCAAATCCTTTTCATGGTAGGAGATAGCTCAGGGGTATCTCCTGCCTCAAGTATACAGTGTTaGCCTCTTTCTGCTACAAAT +
Preference number: 5 (lower is better)
Translates to: AMPQILFMVGDSSGVSPASSIQC*PLSATN
Trigger: ATTTGTAGCAGAAAGAGGCAAACACTGTATACTTGA...GGCAGGAGATACCCCTGAGCTATCTCCTACCATGAAAAGGATTTGAGGCATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTGTGAGGAAGAAGTCTTaGTCAGACTTAAAAGGAACT +
Preference number: 5 (lower is better)
Translates to: PITDVGNGKADEVRVLAIVRKKS*SDLKGT
Trigger: AGTTCCTTTTAAGTCTGACAAAGACTTCTTCCTCAC...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCGGAACAGATCTCTCATaGGCTCTAGTACCATCTCTG +
Preference number: 5 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFGTDLS*ALVPSL
Trigger: CAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCC...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTAGGCAGTTCAGTTGGTaGAGCTCAAAGTCATTAATT +
Preference number: 5 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSRQFSW*SSKSLI
Trigger: AATTAATGACTTTGAGCTCAACCAACTGAACTGCCT...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTAGAACAATGCCTGTTTTaGGAAAGAGACTCTCATTCT +
Preference number: 5 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVEQCLF*ERDSHS
Trigger: AGAATGAGAGTCTCTTTCCAAAAACAGGCATTGTTC...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAAGACCCTCTCACCAATTaGCTTGGTGATTCTTCAAGC +
Preference number: 5 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKDPLTN*LGDSSS
Trigger: GCTTGAAGAATCACCAAGCAAATTGGTGAGAGGGTC...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTATAGAGACATCAACATaGGGAAGTGCAAGACAACAC +
Preference number: 5 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLIETST*GSARQH
Trigger: GTGTTGTCTTGCACTTCCCAATGTTGATGTCTCTAT...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp AACTTGGTCCAGGTGCAGCTCCAAGAAAGGCAGTTCAGTTGGTTGAGCTCAAAGTACAAGTCATCAGATTaGCTGCAAAATACACCAGTT +
Preference number: 5 (lower is better)
Translates to: NLVQVQLQERQFSWLSSKYKSSD*LQNTPV
Trigger: AACTGGTGTATTTTGCAGCAAATCTGATGACTTGTA...CTTTGAGCTCAACCAACTGAACTGCCTTTCTTGGAGCTGCACCTGGACCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATACAGCAAGCCTTCAGGTaGGAGAGAGCTCTGGACAAA +
Preference number: 5 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFIQQAFR*ERALDK
Trigger: TTTGTCCAGAGCTCTCTCCAACCTGAAGGCTTGCTG...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GTTTGCTATCAGAATAATTGGGGCCAGAGTCTGCCTTTATTGAAAGAAAATGTCCAGCAAGCCTTCAGGTaGGAGAGAGCTCTGGACAAA +
Preference number: 5 (lower is better)
Translates to: VCYQNNWGQSLPLLKENVQQAFR*ERALDK
Trigger: TTTGTCCAGAGCTCTCTCCAACCTGAAGGCTTGCTG...GACATTTTCTTTCAATAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATCCGCCTGTCTTAGCTTaGTCCTCAGCTGTTACAAGA +
Preference number: 5 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHPPVLA*SSAVTR
Trigger: TCTTGTAACAGCTGAGGACAAAGCTAAGACAGGCGG...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTCTTCAGTGTTCAGTTTaGAAATCCAGGCTGAGTCTT +
Preference number: 5 (lower is better)
Translates to: PTPGTLSKPKPSFILQCLLQCSV*KSRLSL
Trigger: AAGACTCAGCCTGGATTTCAAAACTGAACACTGAAG...AAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS TCA 90 bp AGACATGTAAGCATAAGCTATGTAAACGGTCCGCGATTTCCTAAATaGGAAAGTGCAGCTGCTTGGCTTTCACATCCACCTTTTCTCTCA +
Preference number: 5 (lower is better)
Translates to: RHVSISYVNGPRFPK*ESAAAWLSHPPFLS
Trigger: TGAGAGAAAAGGTGGATGTGAAAGCCAAGCAGCTGCACTTTCTCATTTAGGAAATCGCGGACCGTTTACATAGCTTATGCTTACATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS TCA 90 bp CAATCCTGCCTCCCAGCTAGCTGCTGGTGTTTGAAATTCCAACTCTaGAGTGGTAGTCTGGTATCTTCTTTTAAAATGTGGAAGAGAGTA +
Preference number: 5 (lower is better)
Translates to: QSCLPASCWCLKFQL*SGSLVSSFKMWKRV
Trigger: TACTCTCTTCCACATTTTAAAAGAAGATACCAGACTACCACTTCAGAGTTGGAATTTCAAACACCAGCAGCTAGCTGGGAGGCAGGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529399.1
CDS TCA 90 bp TCTATAACATATACGTCATGCCTAAAATTTCAGGTAAGAAGGATATaGCCTCAGGCTGGAGTCAGATTGAATTCAGGCCAGAGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: SITYTSCLKFQVRRI*PQAGVRLNSGQSGE
Trigger: CTCCCCACTCTGGCCTGAATTCAATCTGACTCCAGCCTGAGGTCATATCCTTCTTACCTGAAATTTTAGGCATGACGTATATGTTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529111.5
CDS GCA 90 bp AGGAGTGGGCATGTTTTCCTGCTGTGGTTAATCTGTAGATTGCCTTaGCATCTTCTGTTTGTTTCTAGGCTCTTTCATGGATTATGCAAC +
Preference number: 5 (lower is better)
Translates to: RSGHVFLLWLICRLP*HLLFVSRLFHGLCN
Trigger: GTTGCATAATCCATGAAAGAGCCTAGAAACAAACAGAAGATGGCAAGGCAATCTACAGATTAACCACAGCAGGAAAACATGCCCACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530589.1
CDS-3UTR CAA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATACGCAAGATACAATCATaGACCCTGAGTCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFIRKIQS*TLSLPS
Trigger: GGATGGCAGACTCAGGGTCAATGATTGTATCTTGCG...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CAA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCAACCTTCCATCTTTTaGTGCAGCTCCTCCATCTAT +
Preference number: 5 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFQPSIF*CSSSIY
Trigger: ATAGATGGAGGAGCTGCACAAAAAGATGGAAGGTTG...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTCAACCTTCCATCTTTTaGTGCAGCTCCTCCATCTAT +
Preference number: 5 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPQPSIF*CSSSIY
Trigger: ATAGATGGAGGAGCTGCACAAAAAGATGGAAGGTTG...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CAA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCCAACAAGCATGTGCTTaGGAATTGGTGAGTACCTTC +
Preference number: 5 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFQQACA*ELVSTF
Trigger: GAAGGTACTCACCAATTCCAAAGCACATGCTTGTTG...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTCAACAAGCATGTGCTTaGGAATTGGTGAGTACCTTC +
Preference number: 5 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPQQACA*ELVSTF
Trigger: GAAGGTACTCACCAATTCCAAAGCACATGCTTGTTG...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CAA 90 bp AGAACCCAGGGTTTTACATCAAAATGGGTGAAGCAGAGGGATACTCCTTGTATACAACAAGCATGTGCTTaGGAATTGGTGAGTACCTTC +
Preference number: 5 (lower is better)
Translates to: RTQGFTSKWVKQRDTPCIQQACA*ELVSTF
Trigger: GAAGGTACTCACCAATTCCAAAGCACATGCTTGTTG...TATACAAGGAGTATCCCTCTGCTTCACCCATTTTGATGTAAAACCCTGGGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp TCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATACAGTTTGTGTTGTAATCTTCAGGTTGATATaGTGCTATAATCGTCACTGT +
Preference number: 5 (lower is better)
Translates to: SHPLAPLFPSWLHTVCVVIFRLI*CYNRHC
Trigger: ACAGTGACGATTATAGCACAATATCAACCTGAAGAT...TACAACACAAACTGTATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCAATTACAGATGTGGGTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTATCTTCAGGTTGATATaGTGCTATAATCGTCACTGT +
Preference number: 5 (lower is better)
Translates to: PITDVGNGKADEVRVLAIIFRLI*CYNRHC
Trigger: ACAGTGACGATTATAGCACAATATCAACCTGAAGAT...AATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTACCCACATCTGTAATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GAGGTTCATCCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTATCTTCAGGTTGATATaGTGCTATAATCGTCACTGT +
Preference number: 5 (lower is better)
Translates to: EVHPYTWHFEQTKAFLHTIFRLI*CYNRHC
Trigger: ACAGTGACGATTATAGCACAATATCAACCTGAAGAT...AGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGGATGAACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCTACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTATCTTCAGGTTGATATaGTGCTATAATCGTCACTGT +
Preference number: 5 (lower is better)
Translates to: PYTWHFEQTKAFLHTAMSIFRLI*CYNRHC
Trigger: ACAGTGACGATTATAGCACAATATCAACCTGAAGAT...AGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAATTTAAAACTAAGTCCTaGACTTGGCAGCCCACTGTC +
Preference number: 5 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKFKTKS*TWQPTV
Trigger: GACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAAA...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTTTTAAAACTAAGTCCTaGACTTGGCAGCCCACTGTC +
Preference number: 5 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFFKTKS*TWQPTV
Trigger: GACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAAA...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTACACCGATATCAAGTCGTCATaGATCCGATCCTTCATGGGC +
Preference number: 5 (lower is better)
Translates to: MKQILGILNRKVLGHKYTDIKSS*IRSFMG
Trigger: GCCCATGAAGGATCGGATCAATGACGACTTGATATC...GGTGTACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTGATATCAAGTCGTCATaGATCCGATCCTTCATGGGC +
Preference number: 5 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEIDIKSS*IRSFMG
Trigger: GCCCATGAAGGATCGGATCAATGACGACTTGATATC...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCCCGGCTTCTATAAACTaGTGCTCTTGGATATCTTTC +
Preference number: 5 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFPASIN*CSWISF
Trigger: GAAAGATATCCAAGAGCACAAGTTTATAGAAGCCGG...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCCTGGTTCCATATAAATaGTCATTGTACTGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFLVPYK*SLYWPA
Trigger: AGCCGGCCAGTACAATGACAATTTATATGGAACCAG...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCTCAAGTATACAGTGTTaGCCTCTTTCTGCTACAAAT +
Preference number: 5 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPSSIQC*PLSATN
Trigger: ATTTGTAGCAGAAAGAGGCAAACACTGTATACTTGA...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CAATGTCTTTTCTGTCCCACCCTTTGGCCCCTCTGTTTCCTTCATGGCTTCATATCAAGTATACAGTGTTaGCCTCTTTCTGCTACAAAT +
Preference number: 5 (lower is better)
Translates to: QCLFCPTLWPLCFLHGFISSIQC*PLSATN
Trigger: ATTTGTAGCAGAAAGAGGCAAACACTGTATACTTGA...TATGAAGCCATGAAGGAAACAGAGGGGCCAAAGGGTGGGACAGAAAAGACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCGCAACTTGTAACCGCTaGATAGCATTTCCTGATACA +
Preference number: 5 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFATCNR*IAFPDT
Trigger: TGTATCAGGAAATGCTATCAAGCGGTTACAAGTTGC...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGGTGAGGAAGAAGTCTTaGTCAGACTTAAAAGGAACT +
Preference number: 5 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGVRKKS*SDLKGT
Trigger: AGTTCCTTTTAAGTCTGACAAAGACTTCTTCCTCAC...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGGAACAATGCCTGTTTTaGGAAAGAGACTCTCATTCT +
Preference number: 5 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGEQCLF*ERDSHS
Trigger: AGAATGAGAGTCTCTTTCCAAAAACAGGCATTGTTC...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCCTGAAACTGGCGAATaGCAGACATGGACATATCTT +
Preference number: 5 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFPETGE*QTWTYL
Trigger: AAGATATGTCCATGTCTGCAATTCGCCAGTTTCAGG...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp AAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTGTCCCACCCTTTGGCCCTACAAGTCATCAGATTaGCTGCAAAATACACCAGTT +
Preference number: 5 (lower is better)
Translates to: KPKPSFILQCLFCPTLWPYKSSD*LQNTPV
Trigger: AACTGGTGTATTTTGCAGCAAATCTGATGACTTGTA...GGGCCAAAGGGTGGGACAGAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTCCGTGGTGCTACACATaGTACCAGAGCATGAAAAAT +
Preference number: 5 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPPWCYT*YQSMKN
Trigger: ATTTTTCATGCTCTGGTACAATGTGTAGCACCACGG...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAACATTGGGAGTCAACCTaGCCACTTGGTTGTCTGTCC +
Preference number: 5 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQHWEST*PLGCLS
Trigger: GGACAGACAACCAAGTGGCAAGGTTGACTCCCAATG...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CTACCTAATGAGGGAAACACCAAACTACTCTGGTATGATCACAGAGGCATCCAACTTCAGTGTTCAGTTTaGAAATCCAGGCTGAGTCTT +
Preference number: 5 (lower is better)
Translates to: LPNEGNTKLLWYDHRGIQLQCSV*KSRLSL
Trigger: AAGACTCAGCCTGGATTTCAAAACTGAACACTGAAG...TTGGATGCCTCTGTGATCATACCAGAGTAGTTTGGTGTTTCCCTCATTAGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR CAA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTTCGAGCACAAAATTATaGGAACAAAGCAGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFSSTKL*EQSREE
Trigger: CTCCTCCCTGCTTTGTTCCAATAATTTTGTGCTCGA...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404783.7
ENST00000426717.6
CDS-3UTR CAA 90 bp CTACCTAATGAGGGAAACACCAAACTACTCTGGTATGATCACAGAGGCATCCAACTACCCACCTTCCTTTaGCAGAAAAGACAAGACATT +
Preference number: 5 (lower is better)
Translates to: LPNEGNTKLLWYDHRGIQLPTFL*QKRQDI
Trigger: AATGTCTTGTCTTTTCTGCAAAAGGAAGGTGGGTAG...TTGGATGCCTCTGTGATCATACCAGAGTAGTTTGGTGTTTCCCTCATTAGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR CAA 90 bp CAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTACACCAGGCCCGCAGAGGGATACTCCTaGTATATGAAACAGATATTA +
Preference number: 5 (lower is better)
Translates to: QILGILNRKVLGHKYTRPAEGYS*YMKQIL
Trigger: TAATATCTGTTTCATATACAAGGAGTATCCCTCTGC...GGGCCTGGTGTACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAACCCAGTCACACAAGATaGTCATGCGAGCTGAAGGGG +
Preference number: 5 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKPSHTR*SCELKG
Trigger: CCCCTTCAGCTCGCATGACAATCTTGTGTGACTGGG...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS-3UTR CAA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACACGCAAGATACAATCATaGACCCTGAGTCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTRKIQS*TLSLPS
Trigger: GGATGGCAGACTCAGGGTCAATGATTGTATCTTGCG...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCAAACCTTTAGGGCCTTaGAACAGTTTGATTTCCACA +
Preference number: 5 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFKPLGP*NSLIST
Trigger: TGTGGAAATCAAACTGTTCAAAGGCCCTAAAGGTTT...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATCAACCTTCCATCTTTTaGTGCAGCTCCTCCATCTAT +
Preference number: 5 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHQPSIF*CSSSIY
Trigger: ATAGATGGAGGAGCTGCACAAAAAGATGGAAGGTTG...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTCAACCTTCCATCTTTTaGTGCAGCTCCTCCATCTAT +
Preference number: 5 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSQPSIF*CSSSIY
Trigger: ATAGATGGAGGAGCTGCACAAAAAGATGGAAGGTTG...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AGAACCCAGGGTTTTACATCAAAATGGGTGAAGCAGAGGGATACTCCTTGTATATCTAAAGTGCCATTGTaGCCAGAGAGTAGATGGTTT +
Preference number: 5 (lower is better)
Translates to: RTQGFTSKWVKQRDTPCISKVPL*PESRWF
Trigger: AAACCATCTACTCTCTGGCAACAATGGCACTTTAGA...TATACAAGGAGTATCCCTCTGCTTCACCCATTTTGATGTAAAACCCTGGGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp CAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTTGAGAGGAGGAAGCTTTaGTCACACTCAACAGGGGAA +
Preference number: 5 (lower is better)
Translates to: QHNKWRCKFYWKRPSHQFERRKL*SHSTGE
Trigger: TTCCCCTGTTGAGTGTGACAAAAGCTTCCTCCTCTC...AAATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CAA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTAGTTGCGGTGCTATGTaGGGAATGACTGGTCATCTC +
Preference number: 5 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVISCGAM*GMTGHL
Trigger: GAGATGACCAGTCATTCCCAACATAGCACCGCAACT...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTTCAATCACTCCAGGTTaGGCATTAAACTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFSITPG*ALNFTV
Trigger: GACAGTGAAGTTTAATGCCAAACCTGGAGTGATTGA...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATAAGAATGAGGTCTTCTaGTCCTCGTTCAGGATCACT +
Preference number: 5 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHKNEVF*SSFRIT
Trigger: AGTGATCCTGAACGAGGACAAGAAGACCTCATTCTT...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACCCTACACCTGGCACTTaGAGCAAACCAAAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNPTPGT*SKPKPS
Trigger: GGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTAGG...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACAGAACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCGTGAGGAAGAAGTCTTaGTCAGACTTAAAAGGAACT +
Preference number: 5 (lower is better)
Translates to: TEPRVEWLLSLKSLSPNTVRKKS*SDLKGT
Trigger: AGTTCCTTTTAAGTCTGACAAAGACTTCTTCCTCAC...GGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACCCAGAGTAGAGTGGTTATTATCACTGAAAAGTCTCTCCCCAAACACCATGGGCCTAATTACTCATTGTaGGCCAAAATGCTAAATGGT +
Preference number: 5 (lower is better)
Translates to: TQSRVVIITEKSLPKHHGPNYSL*AKMLNG
Trigger: ACCATTTAGCATTTTGGCCAACAATGAGTAATTAGG...CCCATGGTGTTTGGGGAGAGACTTTTCAGTGATAATAACCACTCTACTCTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCGAACAATGCCTGTTTTaGGAAAGAGACTCTCATTCT +
Preference number: 5 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFEQCLF*ERDSHS
Trigger: AGAATGAGAGTCTCTTTCCAAAAACAGGCATTGTTC...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAACCGTGGTGCTACACATaGTACCAGAGCATGAAAAAT +
Preference number: 5 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKPWCYT*YQSMKN
Trigger: ATTTTTCATGCTCTGGTACAATGTGTAGCACCACGG...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GAGTGCATTTGCACCAGATGTAATCTGGGTAACTTTCATGCCATTTCCATACAAGTCTGTCCTCATGAGTaGCTAGGGAGATACTATACT +
Preference number: 5 (lower is better)
Translates to: ECICTRCNLGNFHAISIQVCPHE*LGRYYT
Trigger: AGTATAGTATCTCCCTAGCAACTCATGAGGACAGAC...TTGTATGGAAATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATCATTGGGAGTCAACCTaGCCACTTGGTTGTCTGTCC +
Preference number: 5 (lower is better)
Translates to: VINLGISLSPWLKYICRNHWEST*PLGCLS
Trigger: GGACAGACAACCAAGTGGCAAGGTTGACTCCCAATG...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAAGTCTGCCATCCCATaGGGAGTCAACCTTGCCACT +
Preference number: 5 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKKSAIP*GVNLAT
Trigger: AGTGGCAAGGTTGACTCCCAATGGGATGGCAGACTT...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp ACATCAAACTCCAGCCATTGGATTGTAGGGCTTTTAAGCTACCTAATGAGGGAAATCAAACTCCAGCCATaGGATTGTAGGGCTTTTAAG +
Preference number: 5 (lower is better)
Translates to: TSNSSHWIVGLLSYLMREIKLQP*DCRAFK
Trigger: CTTAAAAGCCCTACAATCCAATGGCTGGAGTTTGAT...TTCCCTCATTAGGTAGCTTAAAAGCCCTACAATCCAATGGCTGGAGTTTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS GCA 90 bp TGTTCTGTTGCTACATGGTGTTGCCTTTGTTTTCTCAAGTTGAATTaGTCACAAAGTGCAGATAGAGAAATACTCCTTTGCCTACCTGAC +
Preference number: 5 (lower is better)
Translates to: CSVATWCCLCFLKLN*SQSADREILLCLPD
Trigger: GTCAGGTAGGCAAAGGAGTATTTCTCTATCTGCACTTTGTGAGCAATTCAACTTGAGAAAACAAAGGCAACACCATGTAGCAACAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456295.2
ENST00000529111.5
CDS-3UTR CAA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTCTGCAGCTGTGTTGCTaGGTGAGGTATGCATTCATA +
Preference number: 5 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVILQLCC*VRYAFI
Trigger: TATGAATGCATACCTCACCAAGCAACACAGCTGCAG...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR CAA 90 bp TACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTTCCAAAGTATCTGTGTaGACAATTATAGGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: YTWHFEQTKAFLHTAMSFSKVSV*TIIGAG
Trigger: TCCTGCTCCTATAATTGTCAACACAGATACTTTGGA...AAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAATCCAAAGTATCTGTGTaGACAATTATAGGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKSKVSV*TIIGAG
Trigger: TCCTGCTCCTATAATTGTCAACACAGATACTTTGGA...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACCGCAAGATACAATCATaGACCCTGAGTCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNRKIQS*TLSLPS
Trigger: GGATGGCAGACTCAGGGTCAATGATTGTATCTTGCG...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAGGGCCTTTGAACAGTTaGATTTCCACAACGGTCTCC +
Preference number: 5 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKGPLNS*ISTTVS
Trigger: GGAGACCGTTGTGGAAATCAAACTGTTCAAAGGCCC...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAAGGGCCTTTGAACAGTTaGATTTCCACAACGGTCTCC +
Preference number: 5 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKGPLNS*ISTTVS
Trigger: GGAGACCGTTGTGGAAATCAAACTGTTCAAAGGCCC...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp TCCTTGTATATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACCAACCTTCCATCTTTTaGTGCAGCTCCTCCATCTAT +
Preference number: 5 (lower is better)
Translates to: SLYMKQILGILNRKVLGHQPSIF*CSSSIY
Trigger: ATAGATGGAGGAGCTGCACAAAAAGATGGAAGGTTG...GTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATATACAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTGTAGATGGTTTTCCATaGGTGGAGAATAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEIVDGFP*VENKSE
Trigger: CTCACTCTTATTCTCCACCAATGGAAAACCATCTAC...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GTAATGGGAAGGCTGATGAGGTTCGAGTGCTGGCAATTTTTCTTTAAAGCAAAATATTCTAAAGTGCCATaGTTGCCAGAGAGTAGATGG +
Preference number: 5 (lower is better)
Translates to: VMGRLMRFECWQFFFKAKYSKVP*LPESRW
Trigger: CCATCTACTCTCTGGCAACAATGGCACTTTAGAATA...TTTTGCTTTAAAGAAAAATTGCCAGCACTCGAACCTCATCAGCCTTCCCATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAAGCATGTGCTTTGGAATaGGTGAGTACCTTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKACALE*VSTFLE
Trigger: CTCCAGGAAGGTACTCACCAATTCCAAAGCACATGC...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAGAGAGGAGGAAGCTTTaGTCACACTCAACAGGGGAA +
Preference number: 5 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKERRKL*SHSTGE
Trigger: TTCCCCTGTTGAGTGTGACAAAAGCTTCCTCCTCTC...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAAGAGAGGAGGAAGCTTTaGTCACACTCAACAGGGGAA +
Preference number: 5 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKERRKL*SHSTGE
Trigger: TTCCCCTGTTGAGTGTGACAAAAGCTTCCTCCTCTC...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTAGTTGCGGTGCTATGTaGGGAATGACTGGTCATCTC +
Preference number: 5 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQASCGAM*GMTGHL
Trigger: GAGATGACCAGTCATTCCCAACATAGCACCGCAACT...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACAGTTGCGGTGCTATGTaGGGAATGACTGGTCATCTC +
Preference number: 5 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNSCGAM*GMTGHL
Trigger: GAGATGACCAGTCATTCCCAACATAGCACCGCAACT...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTTTGAAGGCTGACGAGTaGCGGTGCTATGTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQALKADE*RCYVGN
Trigger: ATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAA...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATATTTAAAACTAAGTCCTaGACTTGGCAGCCCACTGTC +
Preference number: 5 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFIFKTKS*TWQPTV
Trigger: GACAGTGGGCTGCCAAGTCAAGGACTTAGTTTTAAA...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATTCAATCACTCCAGGTTaGGCATTAAACTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHSITPG*ALNFTV
Trigger: GACAGTGAAGTTTAATGCCAAACCTGGAGTGATTGA...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATCCGGCTTCTATAAACTaGTGCTCTTGGATATCTTTC +
Preference number: 5 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHPASIN*CSWISF
Trigger: GAAAGATATCCAAGAGCACAAGTTTATAGAAGCCGG...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAACCATATAAATTGTCATaGTACTGGCCGGCTTCTATA +
Preference number: 5 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKPYKLS*YWPASI
Trigger: TATAGAAGCCGGCCAGTACAATGACAATTTATATGG...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTCTGGTTCCATATAAATaGTCATTGTACTGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILLVPYK*SLYWPA
Trigger: AGCCGGCCAGTACAATGACAATTTATATGGAACCAG...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AGCAGAGGGATACTCCTTGTATATGAAACAGATATTAGGGATTCTCAACAGGAACTGGTTCCATATAAATaGTCATTGTACTGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: SRGILLVYETDIRDSQQELVPYK*SLYWPA
Trigger: AGCCGGCCAGTACAATGACAATTTATATGGAACCAG...TTCCTGTTGAGAATCCCTAATATCTGTTTCATATACAAGGAGTATCCCTCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp ACACCTGGCACTTTGAGCAAACCAAAGCCTTCCTTCATACTGCAATGTCTTTTCTCAAGTATACAGTGTTaGCCTCTTTCTGCTACAAAT +
Preference number: 5 (lower is better)
Translates to: TPGTLSKPKPSFILQCLFSSIQC*PLSATN
Trigger: ATTTGTAGCAGAAAGAGGCAAACACTGTATACTTGA...GAAAAGACATTGCAGTATGAAGGAAGGCTTTGGTTTGCTCAAAGTGCCAGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GACAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATCCTGAAACTGGCGAATaGCAGACATGGACATATCTT +
Preference number: 5 (lower is better)
Translates to: DNTTNGGVNSIGKDPLTNPETGE*QTWTYL
Trigger: AAGATATGTCCATGTCTGCAATTCGCCAGTTTCAGG...ATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GTTTGCTATCAGAATAATTGGGGCCAGAGTCTGCCTTTATTGAAAGAAAATGTCCCGTGGTGCTACACATaGTACCAGAGCATGAAAAAT +
Preference number: 5 (lower is better)
Translates to: VCYQNNWGQSLPLLKENVPWCYT*YQSMKN
Trigger: ATTTTTCATGCTCTGGTACAATGTGTAGCACCACGG...GACATTTTCTTTCAATAAAGGCAGACTCTGGCCCCAATTATTCTGATAGCAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAAAGGATATTTACAGACTaGAGTGTGTGTGTGTGTTTC +
Preference number: 5 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKRIFTD*SVCVCF
Trigger: GAAACACACACACACACTCAAGTCTGTAAATATCCT...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACCTTGCCACTTGGTaGTCTGTCCTCATGAGTTGC +
Preference number: 5 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKNLATW*SVLMSC
Trigger: GCAACTCATGAGGACAGACAACCAAGTGGCAAGGTT...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CAAATTAAAGAGATACCAAGCATTGAAGAGCAGCCAGAACGGAAAGGAATACACAAGTATTCAGAGTCTTaGTTCCATAACCGTCGTCAC +
Preference number: 5 (lower is better)
Translates to: QIKEIPSIEEQPERKGIHKYSES*FHNRRH
Trigger: GTGACGACGGTTATGGAACAAAGACTCTGAATACTT...GTGTATTCCTTTCCGTTCTGGCTGCTCTTCAATGCTTGGTATCTCTTTAATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS-3UTR CAA 90 bp ACATGTTCTGCAAGAACAGCACAGCAAATTAAAGAGATACCAAGCATTGAAGAGACAGGAACCCGCTGCTaGATTGCTGTTTCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: TCSARTAQQIKEIPSIEETGTRC*IAVSSF
Trigger: AAAAGAAGAAACAGCAATCAAGCAGCGGGTTCCTGT...CTCTTCAATGCTTGGTATCTCTTTAATTTGCTGTGCTGTTCTTGCAGAACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398304.5
CDS TCA 90 bp ACACATGTTCTGTTGCTACATGGTGTTGCCTTTGTTTTCTCAAGTTaGATTGCTCACAAAGTGCAGATAGAGAAATACTCCTTTGCCTAC +
Preference number: 5 (lower is better)
Translates to: THVLLLHGVAFVFSS*IAHKVQIEKYSFAY
Trigger: GTAGGCAAAGGAGTATTTCTCTATCTGCACTTTGTGAGCAATTCAACTTGAGAAAACAAAGGCAACACCATGTAGCAACAGAACATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456295.2
ENST00000529111.5
CDS TCA 90 bp TCGCATACAAGGTTTGTAGTTCTTATTTATGATGTGACAGACCAGTaGTCTACTTCGCCATTTCAGCATCCTAGCAAAGCTTGGAATAAG +
Preference number: 5 (lower is better)
Translates to: SHTRFVVLIYDVTDQ*STSPFQHPSKAWNK
Trigger: CTTATTCCAAGCTTTGCTAGGATGCTGAAATGGCGAAGTAGATCACTGGTCTGTCACATCATAAATAAGAACTACAAACCTTGTATGCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS TCA 90 bp GAAGTAATACAGGAAGCTTGTCTTGGAAGAGGAGCATGTTATAGTTaGGTGTTGATGGATCTTACTCAAGAGGTAGCTACTAGGATGAAA +
Preference number: 5 (lower is better)
Translates to: EVIQEACLGRGACYS*VLMDLTQEVATRMK
Trigger: TTTCATCCTAGTAGCTACCTCTTGAGTAAGATCCATCAACACTCAACTATAACATGCTCCTCTTCCAAGACAAGCTTCCTGTATTACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529111.5
CDS TCA 90 bp TCGCATACAAGGTTTGTAGTTCTTATTTATGATGTGACAGACCAGTaGTCTACTTCGCCATTTCAGCATCCTGGTATAACTTCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: SHTRFVVLIYDVTDQ*STSPFQHPGITSFL
Trigger: AAGGAAGGAAGTTATACCAGGATGCTGAAATGGCGAAGTAGATCACTGGTCTGTCACATCATAAATAAGAACTACAAACCTTGTATGCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530260.5
CDS-3UTR CAA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTTGCCTACTCTTTCCTTaGGTCAGCTCTGCACAGAAA +
Preference number: 5 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQACLLFP*VSSAQK
Trigger: TTTCTGTGCAGAGCTGACCAAAGGAAAGAGTAGGCA...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280241.12
CDS-3UTR CAA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAATGCCTACTCTTTCCTTaGGTCAGCTCTGCACAGAAA +
Preference number: 5 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKCLLFP*VSSAQK
Trigger: TTTCTGTGCAGAGCTGACCAAAGGAAAGAGTAGGCA...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp AAAGTATCTGTGTTGACAATTATAGGAGCAGGACTGGCCGTGATCCAACTAAAATCCAAAGTATCTGTGTaGACAATTATAGGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: KVSVLTIIGAGLAVIQLKSKVSV*TIIGAG
Trigger: TCCTGCTCCTATAATTGTCAACACAGATACTTTGGA...TTTTAGTTGGATCACGGCCAGTCCTGCTCCTATAATTGTCAACACAGATACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529401.5
CDS-3UTR CAA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTAAACCTTTAGGGCCTTaGAACAGTTTGATTTCCACA +
Preference number: 5 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSKPLGP*NSLIST
Trigger: TGTGGAAATCAAACTGTTCAAAGGCCCTAAAGGTTT...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATATCTAAAGTGCCATTGTaGCCAGAGAGTAGATGGTTT +
Preference number: 5 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFISKVPL*PESRWF
Trigger: AAACCATCTACTCTCTGGCAACAATGGCACTTTAGA...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CAA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACACAACAAGCATGTGCTTaGGAATTGGTGAGTACCTTC +
Preference number: 5 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTQQACA*ELVSTF
Trigger: GAAGGTACTCACCAATTCCAAAGCACATGCTTGTTG...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp ATGGCATTCTGGTGTCAGAAAACTTCTGGGAGCAATATTGATGAAAGTAGGCCTAGCGTAATCTTCAGGTaGATATTGTGCTATAATCGT +
Preference number: 5 (lower is better)
Translates to: MAFWCQKTSGSNIDESRPSVIFR*ILCYNR
Trigger: ACGATTATAGCACAATATCAACCTGAAGATTACGCT...AGGCCTACTTTCATCAATATTGCTCCCAGAAGTTTTCTGACACCAGAATGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CAA 90 bp GCATCTAGGAACAGATCTCTCATTGGCTCTAGTACCATCTCTGGATGTTACAAATTTTTACGCTTGTCATaGAATGACCCTTTCGAATCA +
Preference number: 5 (lower is better)
Translates to: ASRNRSLIGSSTISGCYKFLRLS*NDPFES
Trigger: TGATTCGAAAGGGTCATTCAATGACAAGCGTAAAAA...TTTGTAACATCCAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCCTAGATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAGATATCAAGTCGTCATaGATCCGATCCTTCATGGGC +
Preference number: 5 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKDIKSS*IRSFMG
Trigger: GCCCATGAAGGATCGGATCAATGACGACTTGATATC...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTAAGTTATTCAACTATTaGCATGGCAGGCTCAGGTTA +
Preference number: 5 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSKLFNY*HGRLRL
Trigger: TAACCTGAGCCTGCCATGCAAATAGTTGAATAACTT...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATAAGTTATTCAACTATTaGCATGGCAGGCTCAGGTTA +
Preference number: 5 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHKLFNY*HGRLRL
Trigger: TAACCTGAGCCTGCCATGCAAATAGTTGAATAACTT...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp CCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCCCTAATTACTCATTGTaGGCCAAAATGCTAAATGGT +
Preference number: 5 (lower is better)
Translates to: PLLSVRLVLHTLANFMKFPNYSL*AKMLNG
Trigger: ACCATTTAGCATTTTGGCCAACAATGAGTAATTAGG...GAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACGGAACAGATCTCTCATaGGCTCTAGTACCATCTCTG +
Preference number: 5 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNGTDLS*ALVPSL
Trigger: CAGAGATGGTACTAGAGCCAATGAGAGATCTGTTCC...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTAGGCAGTTCAGTTGGTaGAGCTCAAAGTCATTAATT +
Preference number: 5 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSRQFSW*SSKSLI
Trigger: AATTAATGACTTTGAGCTCAACCAACTGAACTGCCT...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTAGGCAGTTCAGTTGGTaGAGCTCAAAGTCATTAATT +
Preference number: 5 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEIRQFSW*SSKSLI
Trigger: AATTAATGACTTTGAGCTCAACCAACTGAACTGCCT...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GACAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATAGAAAGGCAGTTCAGTaGGTTGAGCTCAAAGTCATT +
Preference number: 5 (lower is better)
Translates to: DNTTNGGVNSIGKDPLTNRKAVQ*VELKVI
Trigger: AATGACTTTGAGCTCAACCAACTGAACTGCCTTTCT...ATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp AAAGGGAGAGTGCAACTTTCAGGTCTTGAATTTGATCATCTGCTGATGTTGCATCTACAAAACCAAGGGTaGGTGGTTCAATTTGATTGT +
Preference number: 5 (lower is better)
Translates to: KGRVQLSGLEFDHLLMLHLQNQG*VVQFDC
Trigger: ACAATCAAATTGAACCACCAACCCTTGGTTTTGTAG...ATGCAACATCAGCAGATGATCAAATTCAAGACCTGAAAGTTGCACTCTCCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp ACTACACACTTATCCTTCCCTGATAGTATGTCATCTCCAAAGGGATTCCTTTCTCTCTCACCAATTTGCTaGGTGATTCTTCAAGCAAAT +
Preference number: 5 (lower is better)
Translates to: TTHLSFPDSMSSPKGFLSLSPIC*VILQAN
Trigger: ATTTGCTTGAAGAATCACCAAGCAAATTGGTGAGAG...AGAAAGGAATCCCTTTGGAGATGACATACTATCAGGGAAGGATAAGTGTGTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTTCCGTGGTGCTACACATaGTACCAGAGCATGAAAAAT +
Preference number: 5 (lower is better)
Translates to: QHNKWRCKFYWKRPSHQFPWCYT*YQSMKN
Trigger: ATTTTTCATGCTCTGGTACAATGTGTAGCACCACGG...AAATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GACAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATAATGGAATTTTGATTTaGGTAAAGCTGAGACCCCCG +
Preference number: 5 (lower is better)
Translates to: DNTTNGGVNSIGKDPLTNNGILI*VKLRPP
Trigger: CGGGGGTCTCAGCTTTACCAAAATCAAAATTCCATT...ATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp CCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCTTCATGCTTCAAGGGAATaGATCTTTTTCCCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: PPVSEVSPPYTCKFYEILHASRE*IFFPLG
Trigger: TCCTAGAGGGAAAAAGATCAATTCCCTTGAAGCATG...AAGAATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GAGTGCATTTGCACCAGATGTAATCTGGGTAACTTTCATGCCATTTCCATACAAAGGATATTTACAGACTaGAGTGTGTGTGTGTGTTTC +
Preference number: 5 (lower is better)
Translates to: ECICTRCNLGNFHAISIQRIFTD*SVCVCF
Trigger: GAAACACACACACACACTCAAGTCTGTAAATATCCT...TTGTATGGAAATGGCATGAAAGTTACCCAGATTACATCTGGTGCAAATGCACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTCACAAAACTGTCATATaGAAAGGATCTAACGGGTAC +
Preference number: 5 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEIHKTVI*KGSNGY
Trigger: GTACCCGTTAGATCCTTTCAATATGACAGTTTTGTG...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GACAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTGGAGCGTCCTCATCTaGATATCGATACTTAGTACA +
Preference number: 5 (lower is better)
Translates to: DNTTNGGVNSIGKDPLTNWSVLI*ISILST
Trigger: TGTACTAAGTATCGATATCAAGATGAGGACGCTCCA...ATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376104.7
CDS-3UTR CAA 90 bp TTAAGCTACCTAATGAGGGAAACACCAAACTACTCTGGTATGATCACAGAGGCACTGCTACAGTATTTATaGAGAGAACTGCATAGCAAA +
Preference number: 5 (lower is better)
Translates to: LSYLMRETPNYSGMITEALLQYL*RELHSK
Trigger: TTTGCTATGCAGTTCTCTCAATAAATACTGTAGCAG...TGCCTCTGTGATCATACCAGAGTAGTTTGGTGTTTCCCTCATTAGGTAGCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS-3UTR CAA 90 bp TCCTTGTATATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACTCAAGAGTAACTGCTTaGGACACTGACCATTTTGAG +
Preference number: 5 (lower is better)
Translates to: SLYMKQILGILNRKVLGHSRVTA*DTDHFE
Trigger: CTCAAAATGGTCAGTGTCCAAAGCAGTTACTCTTGA...GTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATATACAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACAGATTCCTCAGTATCTTaGACAGCTGCTATAAGCAGT +
Preference number: 5 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTDSSVS*TAAISS
Trigger: ACTGCTTATAGCAGCTGTCAAAGATACTGAGGAATC...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATAAAACCTTTAGGGCCTTaGAACAGTTTGATTTCCACA +
Preference number: 5 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFIKPLGP*NSLIST
Trigger: TGTGGAAATCAAACTGTTCAAAGGCCCTAAAGGTTT...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CAA 90 bp GACAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATAAACCTTTAGGGCCTTaGAACAGTTTGATTTCCACA +
Preference number: 5 (lower is better)
Translates to: DNTTNGGVNSIGKDPLTNKPLGP*NSLIST
Trigger: TGTGGAAATCAAACTGTTCAAAGGCCCTAAAGGTTT...ATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CAA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACCAACCTTCCATCTTTTaGTGCAGCTCCTCCATCTAT +
Preference number: 5 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNQPSIF*CSSSIY
Trigger: ATAGATGGAGGAGCTGCACAAAAAGATGGAAGGTTG...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAACAACCTTCCATCTTTTaGTGCAGCTCCTCCATCTAT +
Preference number: 5 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKQPSIF*CSSSIY
Trigger: ATAGATGGAGGAGCTGCACAAAAAGATGGAAGGTTG...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GGTTCACGTTCTTTGGACATGAACCATCAATTTTTCACTATAGGTAGGTTTACATCTAAAGTGCCATTGTaGCCAGAGAGTAGATGGTTT +
Preference number: 5 (lower is better)
Translates to: GSRSLDMNHQFFTIGRFTSKVPL*PESRWF
Trigger: AAACCATCTACTCTCTGGCAACAATGGCACTTTAGA...TGTAAACCTACCTATAGTGAAAAATTGATGGTTCATGTCCAAAGAACGTGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACCAACAAGCATGTGCTTaGGAATTGGTGAGTACCTTC +
Preference number: 5 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNQQACA*ELVSTF
Trigger: GAAGGTACTCACCAATTCCAAAGCACATGCTTGTTG...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TCCCCTCCTGTCAGTGAGGTTAGTCCTCCATACACTTGCAAATTTTATGAAATTATCTTCAGGTTGATATaGTGCTATAATCGTCACTGT +
Preference number: 5 (lower is better)
Translates to: SPPVSEVSPPYTCKFYEIIFRLI*CYNRHC
Trigger: ACAGTGACGATTATAGCACAATATCAACCTGAAGAT...AATTTCATAAAATTTGCAAGTGTATGGAGGACTAACCTCACTGACAGGAGGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAACTTCTGGGAGCAATATaGATGAAAGTAGGCCTTGAC +
Preference number: 5 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKLLGAI*MKVGLD
Trigger: GTCAAGGCCTACTTTCATCAATATTGCTCCCAGAAG...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATGGTTGGTGGTTCAATTaGATTGTACTTAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: VINLGISLSPWLKYICRNGWWFN*IVLSHS
Trigger: GCTGTGGCTAAGTACAATCAAATTGAACCACCAACC...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAATGGAGCGTCCTCATCTaGATATCGATACTTAGTACA +
Preference number: 5 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQWSVLI*ISILST
Trigger: TGTACTAAGTATCGATATCAAGATGAGGACGCTCCA...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR CAA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACAAGAATGAGGTCTTCTaGTCCTCGGTAGCTACTTTC +
Preference number: 5 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNKNEVF*SSVATF
Trigger: GAAAGTAGCTACCGAGGACAAGAAGACCTCATTCTT...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404783.7
ENST00000524982.5
CDS-3UTR CAA 90 bp TATATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACAAGTACTCCAAAGTATCTGTGTaGACAATTATAGGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: YMKQILGILNRKVLGHKYSKVSV*TIIGAG
Trigger: TCCTGCTCCTATAATTGTCAACACAGATACTTTGGA...GTACTTGTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp AAGTCTTTGTCAGACTTAAAAGGAACTCAGATGCTCTTAACAGATCATTGGCAAAAACCTTTAGGGCCTTaGAACAGTTTGATTTCCACA +
Preference number: 5 (lower is better)
Translates to: KSLSDLKGTQMLLTDHWQKPLGP*NSLIST
Trigger: TGTGGAAATCAAACTGTTCAAAGGCCCTAAAGGTTT...TTGCCAATGATCTGTTAAGAGCATCTGAGTTCCTTTTAAGTCTGACAAAGACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAAGTAGATGGTTTTCCATaGGTGGAGAATAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKVDGFP*VENKSE
Trigger: CTCACTCTTATTCTCCACCAATGGAAAACCATCTAC...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAGTAGATGGTTTTCCATaGGTGGAGAATAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKVDGFP*VENKSE
Trigger: CTCACTCTTATTCTCCACCAATGGAAAACCATCTAC...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTTCTAAAGTGCCATTGTaGCCAGAGAGTAGATGGTTT +
Preference number: 5 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQASKVPL*PESRWF
Trigger: AAACCATCTACTCTCTGGCAACAATGGCACTTTAGA...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAATATTCTAAAGTGCCATaGTTGCCAGAGAGTAGATGG +
Preference number: 5 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKYSKVP*LPESRW
Trigger: CCATCTACTCTCTGGCAACAATGGCACTTTAGAATA...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp TCCTTGTATATGAAACAGATATTAGGGATTCTCAACAGGAAGGTTTTAGGGCACATCTTCAGGTTGATATaGTGCTATAATCGTCACTGT +
Preference number: 5 (lower is better)
Translates to: SLYMKQILGILNRKVLGHIFRLI*CYNRHC
Trigger: ACAGTGACGATTATAGCACAATATCAACCTGAAGAT...GTGCCCTAAAACCTTCCTGTTGAGAATCCCTAATATCTGTTTCATATACAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531015.5
CDS-3UTR CAA 90 bp AGGATATTTACAGACTTGAGTGTGTGTGTGTGTTTCCAACCACAGTCATTCATATTTTTACGCTTGTCATaGAATGACCCTTTCGAATCA +
Preference number: 5 (lower is better)
Translates to: RIFTDLSVCVCFQPQSFIFLRLS*NDPFES
Trigger: TGATTCGAAAGGGTCATTCAATGACAAGCGTAAAAA...TATGAATGACTGTGGTTGGAAACACACACACACACTCAAGTCTGTAAATATCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
CDS-3UTR CAA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAACCGGCTTCTATAAACTaGTGCTCTTGGATATCTTTC +
Preference number: 5 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKPASIN*CSWISF
Trigger: GAAAGATATCCAAGAGCACAAGTTTATAGAAGCCGG...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACCCGGCTTCTATAAACTaGTGCTCTTGGATATCTTTC +
Preference number: 5 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNPASIN*CSWISF
Trigger: GAAAGATATCCAAGAGCACAAGTTTATAGAAGCCGG...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTCCATATAAATTGTCATaGTACTGGCCGGCTTCTATA +
Preference number: 5 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVIPYKLS*YWPASI
Trigger: TATAGAAGCCGGCCAGTACAATGACAATTTATATGG...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GACAACACAACAAATGGAGGTGTAAATTCTATTGGAAAAGACCCTCTCACCAATTCAAGTATACAGTGTTaGCCTCTTTCTGCTACAAAT +
Preference number: 5 (lower is better)
Translates to: DNTTNGGVNSIGKDPLTNSSIQC*PLSATN
Trigger: ATTTGTAGCAGAAAGAGGCAAACACTGTATACTTGA...ATTGGTGAGAGGGTCTTTTCCAATAGAATTTACACCTCCATTTGTTGTGTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTGCAACTTGTAACCGCTaGATAGCATTTCCTGATACA +
Preference number: 5 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQAATCNR*IAFPDT
Trigger: TGTATCAGGAAATGCTATCAAGCGGTTACAAGTTGC...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACAGAAAGGCAGTTCAGTaGGTTGAGCTCAAAGTCATT +
Preference number: 5 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNRKAVQ*VELKVI
Trigger: AATGACTTTGAGCTCAACCAACTGAACTGCCTTTCT...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAACATGCTTCAAGGGAATaGATCTTTTTCCCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKHASRE*IFFPLG
Trigger: TCCTAGAGGGAAAAAGATCAATTCCCTTGAAGCATG...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTAAGAATGAGGTCTTCTaGTCCTCTCAGAGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQAKNEVF*SSQSLC
Trigger: ACAAAGACTCTGAGAGGACAAGAAGACCTCATTCTT...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426717.6
CDS-3UTR CAA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACCTTCAGTGTTCAGTTTaGAAATCCAGGCTGAGTCTT +
Preference number: 5 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNLQCSV*KSRLSL
Trigger: AAGACTCAGCCTGGATTTCAAAACTGAACACTGAAG...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS-3UTR CAA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTTGCCTTGGTTTTGAGTaGTCGTCTCATCAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQACLGFE*SSHQFH
Trigger: ATGAAACTGATGAGACGACAACTCAAAACCAAGGCA...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS CCA 90 bp GTGTTGATGGATCTTACTCAAGAGGTAGCTACTAGGATGAAAGACTaGAAGGCATTTCACATTCAATCAATCATTTATCTTTTTCTGGTA +
Preference number: 5 (lower is better)
Translates to: VLMDLTQEVATRMKD*KAFHIQSIIYLFLV
Trigger: TACCAGAAAAAGATAAATGATTGATTGAATGTGAAATGCCTTCCAGTCTTTCATCCTAGTAGCTACCTCTTGAGTAAGATCCATCAACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529111.5
CDS CCA 90 bp CATGTAGACCAGCAATACAACACAAGAGAGAAGAAGAACCACAAATaGAGCTTGTTAACTTTCCATCATATTTGTAATGTCACTACAAGA +
Preference number: 5 (lower is better)
Translates to: HVDQQYNTREKKNHK*SLLTFHHICNVTTR
Trigger: TCTTGTAGTGACATTACAAATATGATGGAAAGTTAACAAGCTCCATTTGTGGTTCTTCTTCTCTCTTGTGTTGTATTGCTGGTCTACATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529111.5
CDS-3UTR CAA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACTCCAAAGTATCTGTGTaGACAATTATAGGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNSKVSV*TIIGAG
Trigger: TCCTGCTCCTATAATTGTCAACACAGATACTTTGGA...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp TTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACAAAAAACCTTTAGGGCCTTaGAACAGTTTGATTTCCACA +
Preference number: 5 (lower is better)
Translates to: FIGLSNCLIFSWKIRGNKKPLGP*NSLIST
Trigger: TGTGGAAATCAAACTGTTCAAAGGCCCTAAAGGTTT...TTTGTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp TCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTCAGGTTATTAGCGTAATCTTCAGGTaGATATTGTGCTATAATCGT +
Preference number: 5 (lower is better)
Translates to: SVTRNKVIQLFAWQAQVISVIFR*ILCYNR
Trigger: ACGATTATAGCACAATATCAACCTGAAGATTACGCT...AATAACCTGAGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACCCATATAAATTGTCATaGTACTGGCCGGCTTCTATA +
Preference number: 5 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNPYKLS*YWPASI
Trigger: TATAGAAGCCGGCCAGTACAATGACAATTTATATGG...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATGTGAGGAAGAAGTCTTaGTCAGACTTAAAAGGAACT +
Preference number: 5 (lower is better)
Translates to: VINLGISLSPWLKYICRNVRKKS*SDLKGT
Trigger: AGTTCCTTTTAAGTCTGACAAAGACTTCTTCCTCAC...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAGGCAGTTCAGTTGGTaGAGCTCAAAGTCATTAATT +
Preference number: 5 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKRQFSW*SSKSLI
Trigger: AATTAATGACTTTGAGCTCAACCAACTGAACTGCCT...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp AATTGTATGTCAGTAACTAGGAACAAAGTTATTCAACTATTTGCATGGCAGGCTGAACAATGCCTGTTTTaGGAAAGAGACTCTCATTCT +
Preference number: 5 (lower is better)
Translates to: NCMSVTRNKVIQLFAWQAEQCLF*ERDSHS
Trigger: AGAATGAGAGTCTCTTTCCAAAAACAGGCATTGTTC...AGCCTGCCATGCAAATAGTTGAATAACTTTGTTCCTAGTTACTGACATACAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GTGATCAACTTAGGAATTAGCCTGAGTCCTTGGCTTAAATATATTTGTAGGAATCTCTCACCAATTTGCTaGGTGATTCTTCAAGCAAAT +
Preference number: 5 (lower is better)
Translates to: VINLGISLSPWLKYICRNLSPIC*VILQAN
Trigger: ATTTGCTTGAAGAATCACCAAGCAAATTGGTGAGAG...ATTCCTACAAATATATTTAAGCCAAGGACTCAGGCTAATTCCTAAGTTGATCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAACACAAAACTGTCATATaGAAAGGATCTAACGGGTAC +
Preference number: 5 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKHKTVI*KGSNGY
Trigger: GTACCCGTTAGATCCTTTCAATATGACAGTTTTGTG...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
CDS-3UTR CAA 90 bp ATTTTCATAGGCCTTTCTAACTGCTTGATATTTTCCTGGAAGATTAGAGGTAACACCTTCAGGTTGATATaGTGCTATAATCGTCACTGT +
Preference number: 5 (lower is better)
Translates to: IFIGLSNCLIFSWKIRGNTFRLI*CYNRHC
Trigger: ACAGTGACGATTATAGCACAATATCAACCTGAAGGT...GTTACCTCTAATCTTCCAGGAAAATATCAAGCAGTTAGAAAGGCCTATGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS-3UTR CAA 90 bp ATGGCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAATCAAGTATACAGTGTTaGCCTCTTTCTGCTACAAAT +
Preference number: 5 (lower is better)
Translates to: MASYSLCCTFVRIHIDCKSSIQC*PLSATN
Trigger: ATTTGTAGCAGAAAGAGGCAAACACTGTATACTTGA...TTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGCCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000648622.1
ENST00000650630.1
CDS-3UTR CAA 90 bp GCTTCATACAGTTTGTGTTGTACATTCGTAAGAATTCACATTGACTGCAAAAACCCTAATTACTCATTGTaGGCCAAAATGCTAAATGGT +
Preference number: 5 (lower is better)
Translates to: ASYSLCCTFVRIHIDCKNPNYSL*AKMLNG
Trigger: ACCATTTAGCATTTTGGCCAACAATGAGTAATTAGG...GTTTTTGCAGTCAATGTGAATTCTTACGAATGTACAACACAAACTGTATGAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000426717.6
ENST00000648622.1
ENST00000650630.1
CDS CCA 72 bp CCCCCTGCACCCGCCGTGGCCATCCCGGAGCCCCGGTaGAAGCAACGCCGCGGGCAAGTACCGAGCCTCTCG +
Preference number: 6 (lower is better)
Translates to: PPAPAVAIPEPR*KQRRGQVPSLS
Trigger: CGAGAGGCTCGGTACTTGCCCGCGGCGTTGCTTCCACCGGGGCTCCGGGATGGCCACGGCGGGTGCAGGGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS CCA 72 bp AGCTGCCGCTTCGATCACTGCCCCCTGCACCCGCCGTaGCCATCCCGGAGCCCCGGTGGAAGCAACGCCGCG +
Preference number: 6 (lower is better)
Translates to: SCRFDHCPLHPP*PSRSPGGSNAA
Trigger: CGCGGCGTTGCTTCCACCGGGGCTCCGGGATGGCCACGGCGGGTGCAGGGGGCAGTGATCGAAGCGGCAGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS GCA 72 bp GAGCGACAGCCTAGACCGAGCTGCCGCTTCGATCACTaGCCCCTGCACCCGCCGTGGCCATCCCGGAGCCCC +
Preference number: 6 (lower is better)
Translates to: ERQPRPSCRFDH*PLHPPWPSRSP
Trigger: GGGGCTCCGGGATGGCCACGGCGGGTGCAGGGGGCAGTGATCGAAGCGGCAGCTCGGTCTAGGCTGTCGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS GCA 72 bp AGCCTAGACCGAGCTGCCGCTTCGATCACTGCCCCCTaGACCCGCCGTGGCCATCCCGGAGCCCCGGTGGAA +
Preference number: 6 (lower is better)
Translates to: SLDRAAASITAP*TRRGHPGAPVE
Trigger: TTCCACCGGGGCTCCGGGATGGCCACGGCGGGTGCAGGGGGCAGTGATCGAAGCGGCAGCTCGGTCTAGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS GCA 72 bp CTCGCCGGGCACATGGAGCGACAGCCTAGACCGAGCTaGCGCTTCGATCACTGCCCCCTGCACCCGCCGTGG +
Preference number: 6 (lower is better)
Translates to: LAGHMERQPRPS*RFDHCPLHPPW
Trigger: CCACGGCGGGTGCAGGGGGCAGTGATCGAAGCGGCAGCTCGGTCTAGGCTGTCGCTCCATGTGCCCGGCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS GCA 72 bp GCGGCAGTGGCAGCTCGCTGGGGGACCCAAACGCTGTaGTCGCCGGGCACATGGAGCGACAGCCTAGACCGA +
Preference number: 6 (lower is better)
Translates to: AAVAARWGTQTL*SPGTWSDSLDR
Trigger: TCGGTCTAGGCTGTCGCTCCATGTGCCCGGCGAGCACAGCGTTTGGGTCCCCCAGCGAGCTGCCACTGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS CCA 72 bp CGCTGGGGGACCCAAACGCTGTGCTCGCCGGGCACATaGAGCGACAGCCTAGACCGAGCTGCCGCTTCGATC +
Preference number: 6 (lower is better)
Translates to: RWGTQTLCSPGT*SDSLDRAAASI
Trigger: GATCGAAGCGGCAGCTCGGTCTAGGCTGTCGCTCCATGTGCCCGGCGAGCACAGCGTTTGGGTCCCCCAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS CCA 72 bp TTAACAACAGGGGACATTCCTTCCGGGCTGCGGCAGTaGCAGCTCGCTGGGGGACCCAAACGCTGTGCTCGC +
Preference number: 6 (lower is better)
Translates to: LTTGDIPSGLRQ*QLAGGPKRCAR
Trigger: GCGAGCACAGCGTTTGGGTCCCCCAGCGAGCTGCCACTGCCGCAGCCCGGAAGGAATGTCCCCTGTTGTTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS CAA 72 bp AAGCCCAGGCCAGTGGAGCCTTTGTGCAGGACTACCTaGCGAGGCTCTCCTTCCAGGGAGACGGCCCGTTGG +
Preference number: 6 (lower is better)
Translates to: KPRPVEPLCRTT*RGSPSRETARW
Trigger: CCAACGGGCCGTCTCCCTGGAAGGAGAGCCTCGCAAGGTAGTCCTGCACAAAGGCTCCACTGGCCTGGGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CCA 72 bp TGTCCAGCCCCCTTTAGTGCAGCAGCTGCCTGCTCGTaGGATGCACCACGGAGGTCAATGCCATTCACCGAT +
Preference number: 6 (lower is better)
Translates to: CPAPFSAAAACS*DAPRRSMPFTD
Trigger: ATCGGTGAATGGCATTGACCTCCGTGGTGCATCCCACGAGCAGGCAGCTGCTGCACTAAAGGGGGCTGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CAA 90 bp CCTTGCGAGGCTCTCCTTCCAGGGAGACGGCCCGTTGGAGAGTCATaGAAGGCTGACGAGTTGCGGTGCTATGTTGGGAATGACTGGTCA +
Preference number: 6 (lower is better)
Translates to: PCEALLPGRRPVGES*KADELRCYVGNDWS
Trigger: TGACCAGTCATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGGCCGTCTCCCTGGAAGGAGAGCCTCGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CAA 90 bp CCTTGCGAGGCTCTCCTTCCAGGGAGACGGCCCGTTGGAGAGTCATaGAAGGCTGACGAGTTGCGGTGCTATGTTGGGAATGACTGGTGT +
Preference number: 6 (lower is better)
Translates to: PCEALLPGRRPVGES*KADELRCYVGNDWC
Trigger: ACACCAGTCATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGGCCGTCTCCCTGGAAGGAGAGCCTCGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418306.6
CDS GCA 72 bp TGTGCTGGGCTGAACCAACCATGTGGGCAGGTACAATaGTCCCCACAAGTCCCTTTGCCCTTGGTGCTCGTC +
Preference number: 6 (lower is better)
Translates to: CAGLNQPCGQVQ*SPQVPLPLVLV
Trigger: GACGAGCACCAAGGGCAAAGGGACTTGTGGGGAGCATTGTACCTGCCCACATGGTTGGTTCAGCCCAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280241.12
ENST00000398301.6
CDS CAA 90 bp CAGGTTCCGGAGGCCTGGTGTAGTCGTCGTCAACAAGCATGTGCTTaGGAATTGGTGAGTACCTTCCTGGAGAGATGGGTGGCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: QVPEAWCSRRQQACA*ELVSTFLERWVAGR
Trigger: CCTCCCTGCCACCCATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCACATGCTTGTTGACGACGACTACACCAGGCCTCCGGAACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS TCA 72 bp CTCTCCTTCCAGGGAGACGGCCCGTTGGAGAGTCATTaGAGGCTGACGAGTTGCGGTGCTATGTTGGGAATG +
Preference number: 6 (lower is better)
Translates to: LSFQGDGPLESH*RLTSCGAMLGM
Trigger: CATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGGCCGTCTCCCTGGAAGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CCA 72 bp CTTCTCAGCACAGCGCAAGCCCCACACACACGATCCTaGGCATGTGCTACTAAAGAGCATCCGTTCCCTCTG +
Preference number: 6 (lower is better)
Translates to: LLSTAQAPHTRS*ACATKEHPFPL
Trigger: CAGAGGGAACGGATGCTCTTTAGTAGCACATGCCCAGGATCGTGTGTGTGGGGCTTGCGCTGTGCTGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398309.6
ENST00000529111.5
ENST00000532653.5
CDS CCA 72 bp AGAAATCAGCTCCGGCAAAACTTCCCGGTGGCTTCCTaGGCTCCGTGGCTGCATGGTCTTTTAGCGGATTCC +
Preference number: 6 (lower is better)
Translates to: RNQLRQNFPVAS*APWLHGLLADS
Trigger: GGAATCCGCTAAAAGACCATGCAGCCACGGAGCCCAGGAAGCCACCGGGAAGTTTTGCCGGAGCTGATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527088.1
CDS CAA 72 bp GGCATCCATCCCATCGGACCCCCGGCTGCAGCTGTGTaGCTTGGTGAGGTATGCATTCATACTGCACTGATG +
Preference number: 6 (lower is better)
Translates to: GIHPIGPPAAAV*LGEVCIHTALM
Trigger: CATCAGTGCAGTATGAATGCATACCTCACCAAGCAACACAGCTGCAGCCGGGGGTCCGATGGGATGGATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280241.12
ENST00000398301.6
CDS CAA 72 bp GCTCTCCTTCCAGGGAGACGGCCCGTTGGAGAGTCATaGAAGGCTGACGAGTTGCGGTGCTATGTTGGGAAT +
Preference number: 6 (lower is better)
Translates to: ALLPGRRPVGES*KADELRCYVGN
Trigger: ATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGGCCGTCTCCCTGGAAGGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CAA 90 bp ACTCCTGACGGCATCCATCCCATCGGACCCCCGGCTGCAGCTGTGTaGCTTGGTGAGGTATGCATTCATACTGCACTGATGCCTACTCTT +
Preference number: 6 (lower is better)
Translates to: TPDGIHPIGPPAAAV*LGEVCIHTALMPTL
Trigger: AAGAGTAGGCATCAGTGCAGTATGAATGCATACCTCACCAAGCAACACAGCTGCAGCCGGGGGTCCGATGGGATGGATGCCGTCAGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280241.12
ENST00000398301.6
CDS CAA 90 bp CGCTGCCTTTGTAGCCAGCTCACACACATCCAGTTGGCTAAGTATTaGTCTGCAGTTCTTCGGCACCGGCACCGTCGCCACCAAACTCCA +
Preference number: 6 (lower is better)
Translates to: RCLCSQLTHIQLAKY*SAVLRHRHRRHQTP
Trigger: TGGAGTTTGGTGGCGACGGTGCCGGTGCCGAAGAACTGCAGACAAATACTTAGCCAACTGGATGTGTGTGAGCTGGCTACAAAGGCAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527466.1
CDS TCA 72 bp TCCCATCGGACCCCCGGCTGCAGCTGTGTTGCTTGGTaGGGTATGCATTCATACTGCACTGATGCCTACTCT +
Preference number: 6 (lower is better)
Translates to: SHRTPGCSCVAW*GMHSYCTDAYS
Trigger: AGAGTAGGCATCAGTGCAGTATGAATGCATACCTCACCAAGCAACACAGCTGCAGCCGGGGGTCCGATGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280241.12
ENST00000398301.6
CDS TCA 72 bp GGAAGAGCACTGAAATGTCCTGCACCCTCCACGCGATaGAGTGTTTCCTCAGGCAGGAGCAACAGCAGCACT +
Preference number: 6 (lower is better)
Translates to: GRALKCPAPSTR*SVSSGRSNSST
Trigger: AGTGCTGCTGTTGCTCCTGCCTGAGGAAACACTTCATCGCGTGGAGGGTGCAGGACATTTCAGTGCTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS GCA 72 bp GGTTGGGGGAGAAAAGGCAGTCCTGTTTGGCCAGTCTaGAGGTATATTTACATCCTGCCAGCAGGAGGTCCG +
Preference number: 6 (lower is better)
Translates to: GWGRKGSPVWPV*RYIYILPAGGP
Trigger: CGGACCTCCTGCTGGCAGGATGTAAATATACCTGCAGACTGGCCAAACAGGACTGCCTTTTCTCCCCCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527466.1
CDS CCA 72 bp TCAGTATCTTTGACAGCTGCTATAAGCAGTGCATCGTaGGAGCAGTGGGAGCAGCGACAGCAGCTCCGCACA +
Preference number: 6 (lower is better)
Translates to: SVSLTAAISSAS*EQWEQRQQLRT
Trigger: TGTGCGGAGCTGCTGTCGCTGCTCCCACTGCTCCCACGATGCACTGCTTATAGCAGCTGTCAAAGATACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280241.12
ENST00000398301.6
CDS CAA 72 bp TGTAGCCAGCTCACACACATCCAGTTGGCTAAGTATTaGTCTGCAGTTCTTCGGCACCGGCACCGTCGCCAC +
Preference number: 6 (lower is better)
Translates to: CSQLTHIQLAKY*SAVLRHRHRRH
Trigger: GTGGCGACGGTGCCGGTGCCGAAGAACTGCAGACAAATACTTAGCCAACTGGATGTGTGTGAGCTGGCTACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527466.1
CDS CAA 90 bp CTTCCAGGGAGACGGCCCGTTGGAGAGTCATTGAAGGCTGACGAGTaGCGGTGCTATGTTGGGAATGACTGGTCATCTCAGAGTCAGGTA +
Preference number: 6 (lower is better)
Translates to: LPGRRPVGESLKADE*RCYVGNDWSSQSQV
Trigger: TACCTGACTCTGAGATGACCAGTCATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGGCCGTCTCCCTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CAA 90 bp CTTCCAGGGAGACGGCCCGTTGGAGAGTCATTGAAGGCTGACGAGTaGCGGTGCTATGTTGGGAATGACTGGTGTAGTCGTCGTCAACAA +
Preference number: 6 (lower is better)
Translates to: LPGRRPVGESLKADE*RCYVGNDWCSRRQQ
Trigger: TTGTTGACGACGACTACACCAGTCATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGGCCGTCTCCCTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418306.6
CDS CAA 90 bp GTTTCTGCTTCCTGTGATAATTCCAACAGCAGTGGCACCTCCTCCTaGGCTCCTACTCTGCTGAACAGGCCTGCAGTGGTTCCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: VSASCDNSNSSGTSS*APTLLNRPAVVPAS
Trigger: GGAAGCTGGAACCACTGCAGGCCTGTTCAGCAGAGTAGGAGCCAAGGAGGAGGTGCCACTGCTGTTGGAATTATCACAGGAAGCAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530589.1
CDS GCA 72 bp GGATTCCTCAGTATCTTTGACAGCTGCTATAAGCAGTaGATCGTGGGAGCAGTGGGAGCAGCGACAGCAGCT +
Preference number: 6 (lower is better)
Translates to: GFLSIFDSCYKQ*IVGAVGAATAA
Trigger: AGCTGCTGTCGCTGCTCCCACTGCTCCCACGATGCACTGCTTATAGCAGCTGTCAAAGATACTGAGGAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280241.12
ENST00000398301.6
CDS GCA 72 bp AGCCCCGTTCTTTTAGGGAAGAGCACTGAAATGTCCTaGACCCTCCACGCGATGAAGTGTTTCCTCAGGCAG +
Preference number: 6 (lower is better)
Translates to: SPVLLGKSTEMS*TLHAMKCFLRQ
Trigger: CTGCCTGAGGAAACACTTCATCGCGTGGAGGGTGCAGGACATTTCAGTGCTCTTCCCTAAAAGAACGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS CCA 72 bp CTTCCCACCTCGGCTCAGAGACGAACAGAATCAGGCTaGAGCTGTCACTTGCAGGCTGTTGCTTTCTCAGTT +
Preference number: 6 (lower is better)
Translates to: LPTSAQRRTESG*SCHLQAVAFSV
Trigger: AACTGAGAAAGCAACAGCCTGCAAGTGACAGCTCCAGCCTGATTCTGTTCGTCTCTGAGCCGAGGTGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527466.1
CDS CCA 72 bp TCCGTGGCTGCATGGTCTTTTAGCGGATTCCTTGATTaGAACAAGGCTCCTGTGAGTGCCCCGCACAGTTCT +
Preference number: 6 (lower is better)
Translates to: SVAAWSFSGFLD*NKAPVSAPHSS
Trigger: AGAACTGTGCGGGGCACTCACAGGAGCCTTGTTCCAATCAAGGAATCCGCTAAAAGACCATGCAGCCACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527088.1
CDS CCA 72 bp AAACTTCCCGGTGGCTTCCTGGGCTCCGTGGCTGCATaGTCTTTTAGCGGATTCCTTGATTGGAACAAGGCT +
Preference number: 6 (lower is better)
Translates to: KLPGGFLGSVAA*SFSGFLDWNKA
Trigger: AGCCTTGTTCCAATCAAGGAATCCGCTAAAAGACCATGCAGCCACGGAGCCCAGGAAGCCACCGGGAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527088.1
CDS CAA 72 bp AGACGGCCCGTTGGAGAGTCATTGAAGGCTGACGAGTaGCGGTGCTATGTTGGGAATGACTGGTCATCTCAG +
Preference number: 6 (lower is better)
Translates to: RRPVGESLKADE*RCYVGNDWSSQ
Trigger: CTGAGATGACCAGTCATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGGCCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CAA 72 bp AGACGGCCCGTTGGAGAGTCATTGAAGGCTGACGAGTaGCGGTGCTATGTTGGGAATGACTGGTGTAGTCGT +
Preference number: 6 (lower is better)
Translates to: RRPVGESLKADE*RCYVGNDWCSR
Trigger: ACGACTACACCAGTCATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGGCCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418306.6
CDS CAA 72 bp AGGCGCTGCCTTTGTAGCCAGCTCACACACATCCAGTaGGCTAAGTATTTGTCTGCAGTTCTTCGGCACCGG +
Preference number: 6 (lower is better)
Translates to: RRCLCSQLTHIQ*AKYLSAVLRHR
Trigger: CCGGTGCCGAAGAACTGCAGACAAATACTTAGCCAACTGGATGTGTGTGAGCTGGCTACAAAGGCAGCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527466.1
CDS CAA 72 bp TCCTGTGATAATTCCAACAGCAGTGGCACCTCCTCCTaGGCTCCTACTCTGCTGAACAGGCCTGCAGTGGTT +
Preference number: 6 (lower is better)
Translates to: SCDNSNSSGTSS*APTLLNRPAVV
Trigger: AACCACTGCAGGCCTGTTCAGCAGAGTAGGAGCCAAGGAGGAGGTGCCACTGCTGTTGGAATTATCACAGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530589.1
CDS CAA 72 bp AGGATGTGCCCGCCTACTCTCCCCAGTCACACAAGATaGTCATGCGAGCTGAAGGGGGCTGAAATTATTCCC +
Preference number: 6 (lower is better)
Translates to: RMCPPTLPSHTR*SCELKGAEIIP
Trigger: GGGAATAATTTCAGCCCCCTTCAGCTCGCATGACAATCTTGTGTGACTGGGGAGAGTAGGCGGGCACATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS CAA 90 bp CCGGAGGCCTGGTGTAGTCGTCGTCAACAAGCATGTGCTTTGGAATaGGTGAGTACCTTCCTGGAGAGATGGGTGGCAGGGAGGTTTTAT +
Preference number: 6 (lower is better)
Translates to: PEAWCSRRQQACALE*VSTFLERWVAGRFY
Trigger: ATAAAACCTCCCTGCCACCCATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCACATGCTTGTTGACGACGACTACACCAGGCCTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS TCA 72 bp GTAGTCGTCGTCAACAAGCATGTGCTTTGGAATTGGTaGGTACCTTCCTGGAGAGATGGGTGGCAGGGAGGT +
Preference number: 6 (lower is better)
Translates to: VVVVNKHVLWNW*VPSWRDGWQGG
Trigger: ACCTCCCTGCCACCCATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCACATGCTTGTTGACGACGACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS GCA 72 bp CCCGTTGGAGAGTCATTGAAGGCTGACGAGTTGCGGTaGTATGTTGGGAATGACTGGTCATCTCAGAGTCAG +
Preference number: 6 (lower is better)
Translates to: PVGESLKADELR*YVGNDWSSQSQ
Trigger: CTGACTCTGAGATGACCAGTCATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS GCA 72 bp CCCGTTGGAGAGTCATTGAAGGCTGACGAGTTGCGGTaGTATGTTGGGAATGACTGGTGTAGTCGTCGTCAA +
Preference number: 6 (lower is better)
Translates to: PVGESLKADELR*YVGNDWCSRRQ
Trigger: TTGACGACGACTACACCAGTCATTCCCAACATAGCACCGCAACTCGTCAGCCTTCAATGACTCTCCAACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418306.6
CDS GCA 72 bp CTCAGAGACGAACAGAATCAGGCTGGAGCTGTCACTTaGAGGCTGTTGCTTTCTCAGTTCCTCTCATGCTGG +
Preference number: 6 (lower is better)
Translates to: LRDEQNQAGAVT*RLLLSQFLSCW
Trigger: CCAGCATGAGAGGAACTGAGAAAGCAACAGCCTGCAAGTGACAGCTCCAGCCTGATTCTGTTCGTCTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527466.1
CDS CAA 72 bp TGGTGTAGTCGTCGTCAACAAGCATGTGCTTTGGAATaGGTGAGTACCTTCCTGGAGAGATGGGTGGCAGGG +
Preference number: 6 (lower is better)
Translates to: WCSRRQQACALE*VSTFLERWVAG
Trigger: CCCTGCCACCCATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCACATGCTTGTTGACGACGACTACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CAA 72 bp GAGGCCTGGTGTAGTCGTCGTCAACAAGCATGTGCTTaGGAATTGGTGAGTACCTTCCTGGAGAGATGGGTG +
Preference number: 6 (lower is better)
Translates to: EAWCSRRQQACA*ELVSTFLERWV
Trigger: CACCCATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCACATGCTTGTTGACGACGACTACACCAGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CAA 72 bp GCTCAGAGACGAACAGAATCAGGCTGGAGCTGTCACTaGCAGGCTGTTGCTTTCTCAGTTCCTCTCATGCTG +
Preference number: 6 (lower is better)
Translates to: AQRRTESGWSCH*QAVAFSVPLML
Trigger: CAGCATGAGAGGAACTGAGAAAGCAACAGCCTGCAAGTGACAGCTCCAGCCTGATTCTGTTCGTCTCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527466.1
CDS CAA 90 bp GGCCTCAAATCGAGCGTAATCTGGCTCAGAGCTACGAAGGTCACATaGGCTGTCAAAGGACATGTCTTCTGGCTAGAAGAAGCCCTGGTG +
Preference number: 6 (lower is better)
Translates to: GLKSSVIWLRATKVT*AVKGHVFWLEEALV
Trigger: CACCAGGGCTTCTTCTAGCCAGAAGACATGTCCTTTGACAGCCAATGTGACCTTCGTAGCTCTGAGCCAGATTACGCTCGATTTGAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434967.1
CDS CAA 90 bp TATGTTGGGAATGACTGGTGTAGTCGTCGTCAACAAGCATGTGCTTaGGAATTGGTGAGTACCTTCCTGGAGAGATGGGTGGCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: YVGNDWCSRRQQACA*ELVSTFLERWVAGR
Trigger: CCTCCCTGCCACCCATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCACATGCTTGTTGACGACGACTACACCAGTCATTCCCAACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418306.6
CDS CAA 90 bp ATTATAGGAGCAGGACTGGCCTTCTCTGATTTCGCCTTCCTGGCATaGTGCACGAACCTGCGACCCAGCTTCTTAGCATACCAGATAGAG +
Preference number: 6 (lower is better)
Translates to: IIGAGLAFSDFAFLA*CTNLRPSFLAYQIE
Trigger: CTCTATCTGGTATGCTAAGAAGCTGGGTCGCAGGTTCGTGCACAATGCCAGGAAGGCGAAATCAGAGAAGGCCAGTCCTGCTCCTATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527466.1
CDS TCA 72 bp GGCAAACATAGCGATGCCAATGGAAGGAATTCACAATaGAGCTGCCGCACAATCAACTTCCCACCTCGGCTC +
Preference number: 6 (lower is better)
Translates to: GKHSDANGRNSQ*SCRTINFPPRL
Trigger: GAGCCGAGGTGGGAAGTTGATTGTGCGGCAGCTTCATTGTGAATTCCTTCCATTGGCATCGCTATGTTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527466.1
CDS CCA 72 bp GTGATAGTCTCTGCCATCCACCTCGTAGTCTCGCTTTaGCCTCGTAGTATGAGGCACACAGGAGCCAAATTT +
Preference number: 6 (lower is better)
Translates to: VIVSAIHLVVSL*PRSMRHTGAKF
Trigger: AAATTTGGCTCCTGTGTGCCTCATACTACGAGGCCAAAGCGAGACTACGAGGTGGATGGCAGAGACTATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000420775.6
ENST00000426717.6
ENST00000457267.5
ENST00000524982.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CAA 90 bp ACACAGGAGCCAAATTTATCAGGGAATTCAGATATCAAGTCGTCATaGATCCGATCCTTCATGGGCCCCAGGATAATCACCGGCCGGGTG +
Preference number: 6 (lower is better)
Translates to: TQEPNLSGNSDIKSS*IRSFMGPRIITGRV
Trigger: CACCCGGCCGGTGATTATCCTGGGGCCCATGAAGGATCGGATCAATGACGACTTGATATCTGAATTCCCTGATAAATTTGGCTCCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000420775.6
ENST00000426717.6
ENST00000457267.5
ENST00000524982.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CAA 90 bp GGGAATGACTGGTGTAGTCGTCGTCAACAAGCATGTGCTTTGGAATaGGTGAGTACCTTCCTGGAGAGATGGGTGGCAGGGAGGTTTTAT +
Preference number: 6 (lower is better)
Translates to: GNDWCSRRQQACALE*VSTFLERWVAGRFY
Trigger: ATAAAACCTCCCTGCCACCCATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCACATGCTTGTTGACGACGACTACACCAGTCATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418306.6
CDS GCA 72 bp TGGGAGAAGCAGGCTTATCACATAGTTTGTTCACAGTaGTGTAAACAGGTTCCGGAGGCCTGGTGTAGTCGT +
Preference number: 6 (lower is better)
Translates to: WEKQAYHIVCSQ*CKQVPEAWCSR
Trigger: ACGACTACACCAGGCCTCCGGAACCTGTTTACAGCACTGTGAACAAACTATGTGATAAGCCTGCTTCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS GCA 72 bp CAGGGGCTTCCACTGAACAATTCTGGGCTGGGCATCTaGCTTGGTTTTGAGTTGTCGTCTCATCAGTTTCAT +
Preference number: 6 (lower is better)
Translates to: QGLPLNNSGLGI*LGFELSSHQFH
Trigger: ATGAAACTGATGAGACGACAACTCAAAACCAAGGCAGATGCCCAGCCCAGAATTGTTCAGTGGAAGCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376104.7
ENST00000650630.1
CDS CAA 72 bp CCGGGGATGTCCCCTTTCGAATCAATCACTCCAGGTTaGGCATTAAACTTCACTGTCTTCAATCGGGCACGT +
Preference number: 6 (lower is better)
Translates to: PGMSPFESITPG*ALNFTVFNRAR
Trigger: ACGTGCCCGATTGAAGACAGTGAAGTTTAATGCCAAACCTGGAGTGATTGATTCGAAAGGGGACATCCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000330014.11
ENST00000398304.5
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000532653.5
CDS TCA 72 bp CTGTGTTGCTTGGTGAGGTATGCATTCATACTGCACTaGTGCCTACTCTTTCCTTTGGTCAGCTCTGCACAG +
Preference number: 6 (lower is better)
Translates to: LCCLVRYAFILH*CLLFPLVSSAQ
Trigger: CTGTGCAGAGCTGACCAAAGGAAAGAGTAGGCATCAGTGCAGTATGAATGCATACCTCACCAAGCAACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280241.12
ENST00000398301.6
CDS TCA 72 bp GCCACAGGAGTCAATATCTCTTTTCAGGTCTCAGTTTaGTCCAGCTGGATTGAGGCCAAGAGCCAGGTAACT +
Preference number: 6 (lower is better)
Translates to: ATGVNISFQVSV*SSWIEAKSQVT
Trigger: AGTTACCTGGCTCTTGGCCTCAATCCAGCTGGATCAAACTGAGACCTGAAAAGAGATATTGACTCCTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376104.7
ENST00000472545.6
ENST00000526147.1
ENST00000650630.1
CDS CAA 72 bp AATGACTGGTGTAGTCGTCGTCAACAAGCATGTGCTTaGGAATTGGTGAGTACCTTCCTGGAGAGATGGGTG +
Preference number: 6 (lower is better)
Translates to: NDWCSRRQQACA*ELVSTFLERWV
Trigger: CACCCATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCACATGCTTGTTGACGACGACTACACCAGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418306.6
CDS CAA 72 bp TCGAGCGTAATCTGGCTCAGAGCTACGAAGGTCACATaGGCTGTCAAAGGACATGTCTTCTGGCTAGAAGAA +
Preference number: 6 (lower is better)
Translates to: SSVIWLRATKVT*AVKGHVFWLEE
Trigger: TTCTTCTAGCCAGAAGACATGTCCTTTGACAGCCAATGTGACCTTCGTAGCTCTGAGCCAGATTACGCTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434967.1
CDS CAA 90 bp CCTTGGCATGGAGACATTAAAGTGACAGTGCTACTCAATGGGCACTaGATGCAGGATGAGTTGGCGAAGCAGATTTCTTCACACTGGAGT +
Preference number: 6 (lower is better)
Translates to: PWHGDIKVTVLLNGH*MQDELAKQISSHWS
Trigger: ACTCCAGTGTGAAGAAATCTGCTTCGCCAACTCATCCTGCATCAAGTGCCCATTGAGTAGCACTGTCACTTTAATGTCTCCATGCCAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS CAA 90 bp TCACCTAATCCGGGGATGTCCCCTTTCGAATCAATCACTCCAGGTTaGGCATTAAACTTCACTGTCTTCAATCGGGCACGTTCCTTTCTT +
Preference number: 6 (lower is better)
Translates to: SPNPGMSPFESITPG*ALNFTVFNRARSFL
Trigger: AAGAAAGGAACGTGCCCGATTGAAGACAGTGAAGTTTAATGCCAAACCTGGAGTGATTGATTCGAAAGGGGACATCCCCGGATTAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000330014.11
ENST00000398304.5
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000532653.5
CDS CCA 72 bp GGAAGCTTTTGTCACACTCAACAGGGGAATAGTGCCTaGGAGAAGCAGGCTTATCACATAGTTTGTTCACAG +
Preference number: 6 (lower is better)
Translates to: GSFCHTQQGNSA*EKQAYHIVCSQ
Trigger: CTGTGAACAAACTATGTGATAAGCCTGCTTCTCCCAGGCACTATTCCCCTGTTGAGTGTGACAAAAGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CCA 72 bp ATCTTATGGCCCACCTGTCTTCTTGACTGGCATTCTTaGGTCTTTCCACTGCCACAGGAGTCAATATCTCTT +
Preference number: 6 (lower is better)
Translates to: ILWPTCLLDWHS*VFPLPQESISL
Trigger: AAGAGATATTGACTCCTGTGGCAGTGGAAAGACCCAAGAATGCCAGTCAAGAAGACAGGTGGGCCATAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376104.7
CDS CCA 72 bp AGCTCGGTCAGTATCTGTCTTCTTGACTGGCATTCTTaGGTCTTTCCACTGCCACAGGAGTCAATATCTCTT +
Preference number: 6 (lower is better)
Translates to: SSVSICLLDWHS*VFPLPQESISL
Trigger: AAGAGATATTGACTCCTGTGGCAGTGGAAAGACCCAAGAATGCCAGTCAAGAAGACAGATACTGACCGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472545.6
ENST00000650630.1
CDS CCA 72 bp CCTAAAATTTCAGGTAAGAAGGATATGACCTCAGGCTaGAGTCAGATTGAATTCAGGCCAGAGTGGGGAGTG +
Preference number: 6 (lower is better)
Translates to: PKISGKKDMTSG*SQIEFRPEWGV
Trigger: CACTCCCCACTCTGGCCTGAATTCAATCTGACTCCAGCCTGAGGTCATATCCTTCTTACCTGAAATTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529111.5
CDS CAA 72 bp ACAGTGCTACTCAATGGGCACTTGATGCAGGATGAGTaGGCGAAGCAGATTTCTTCACACTGGAGTCATTCA +
Preference number: 6 (lower is better)
Translates to: TVLLNGHLMQDE*AKQISSHWSHS
Trigger: TGAATGACTCCAGTGTGAAGAAATCTGCTTCGCCAACTCATCCTGCATCAAGTGCCCATTGAGTAGCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS CAA 90 bp ATTAAAGTGACAGTGCTACTCAATGGGCACTTGATGCAGGATGAGTaGGCGAAGCAGATTTCTTCACACTGGAGTCATTCACATCATGCC +
Preference number: 6 (lower is better)
Translates to: IKVTVLLNGHLMQDE*AKQISSHWSHSHHA
Trigger: GGCATGATGTGAATGACTCCAGTGTGAAGAAATCTGCTTCGCCAACTCATCCTGCATCAAGTGCCCATTGAGTAGCACTGTCACTTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS TCA 72 bp AGCATAAGCTATGTAAACGGTCCGCGATTTCCTAAATaGGAAAGTGCAGCTGCTTGGCTTTCACATCCACCT +
Preference number: 6 (lower is better)
Translates to: SISYVNGPRFPK*ESAAAWLSHPP
Trigger: AGGTGGATGTGAAAGCCAAGCAGCTGCACTTTCTCATTTAGGAAATCGCGGACCGTTTACATAGCTTATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS GCA 72 bp GACGCCAGGAAGAATTCTTATCTCCAAATTCAATCCTaGCTCCCAGCTAGCTGCTGGTGTTTGAAATTCCAA +
Preference number: 6 (lower is better)
Translates to: DARKNSYLQIQS*LPASCWCLKFQ
Trigger: TTGGAATTTCAAACACCAGCAGCTAGCTGGGAGGCAGGATTGAATTTGGAGATAAGAATTCTTCCTGGCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529399.1
CDS CCA 72 bp TGTGCTTTGGAATTGGTGAGTACCTTCCTGGAGAGATaGGTGGCAGGGAGGTTTTATATTCTAAAGTGCCAT +
Preference number: 6 (lower is better)
Translates to: CALELVSTFLER*VAGRFYILKCH
Trigger: ATGGCACTTTAGAATATAAAACCTCCCTGCCACCCATCTCTCCAGGAAGGTACTCACCAATTCCAAAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CCA 72 bp GTTGTTGGTGCAAGCAACTTTGCAGTGGCAAATCATTaGTGTAAAACAGTCAGGGTCCTTAACAACAGGGGA +
Preference number: 6 (lower is better)
Translates to: VVGASNFAVANH*CKTVRVLNNRG
Trigger: TCCCCTGTTGTTAAGGACCCTGACTGTTTTACACCAATGATTTGCCACTGCAAAGTTGCTTGCACCAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS CAA 72 bp GGAGACATTAAAGTGACAGTGCTACTCAATGGGCACTaGATGCAGGATGAGTTGGCGAAGCAGATTTCTTCA +
Preference number: 6 (lower is better)
Translates to: GDIKVTVLLNGH*MQDELAKQISS
Trigger: TGAAGAAATCTGCTTCGCCAACTCATCCTGCATCAAGTGCCCATTGAGTAGCACTGTCACTTTAATGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS GCA 72 bp AATTGCTCACAAAGTGCAGATAGAGAAATACTCCTTTaGCTACCTGACGTAGAGGGAGCGTTTCTGATTGGT +
Preference number: 6 (lower is better)
Translates to: NCSQSADREILL*LPDVEGAFLIG
Trigger: ACCAATCAGAAACGCTCCCTCTACGTCAGGTAGGCAAAGGAGTATTTCTCTATCTGCACTTTGTGAGCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456295.2
ENST00000529111.5
CDS GCA 72 bp TTCCCTCTGAAGAAGAAGAAGAAGAAGAAAACATACTaGAGCTCCCGATTTGGTAAAAAGCCAGTGGCTTGC +
Preference number: 6 (lower is better)
Translates to: FPLKKKKKKKTY*SSRFGKKPVAC
Trigger: GCAAGCCACTGGCTTTTTACCAAATCGGGAGCTGCAGTATGTTTTCTTCTTCTTCTTCTTCTTCAGAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS CCA 72 bp ACGAAGGTCACATTGGCTGTCAAAGGACATGTCTTCTaGCTAGAAGAAGCCCTGGTGAAATCTTATGTGATA +
Preference number: 6 (lower is better)
Translates to: TKVTLAVKGHVF*LEEALVKSYVI
Trigger: TATCACATAAGATTTCACCAGGGCTTCTTCTAGCCAGAAGACATGTCCTTTGACAGCCAATGTGACCTTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434967.1
CDS CCA 72 bp GTCCTTCAGTTTAGGAGTGGGCATGTTTTCCTGCTGTaGTTAATCTGTAGATTGCCTTGCCATCTTCTGTTT +
Preference number: 6 (lower is better)
Translates to: VLQFRSGHVFLL*LICRLPCHLLF
Trigger: AAACAGAAGATGGCAAGGCAATCTACAGATTAACCACAGCAGGAAAACATGCCCACTCCTAAACTGAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530589.1
CDS CAA 72 bp GGTGGCAGGGAGGTTTTATATTCTAAAGTGCCATTGTaGCCAGAGAGTAGATGGTTTTCCATTGGTGGAGAA +
Preference number: 6 (lower is better)
Translates to: GGREVLYSKVPL*PESRWFSIGGE
Trigger: TTCTCCACCAATGGAAAACCATCTACTCTCTGGCAACAATGGCACTTTAGAATATAAAACCTCCCTGCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CAA 72 bp ATGGGTGGCAGGGAGGTTTTATATTCTAAAGTGCCATaGTTGCCAGAGAGTAGATGGTTTTCCATTGGTGGA +
Preference number: 6 (lower is better)
Translates to: MGGREVLYSKVP*LPESRWFSIGG
Trigger: TCCACCAATGGAAAACCATCTACTCTCTGGCAACAATGGCACTTTAGAATATAAAACCTCCCTGCCACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398301.6
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CAA 72 bp AACTCCAGTAACCCTTTCGAATCAATCACTCCAGGTTaGGCATTAAACTTCACTGTCTTCAATCGGGCACGT +
Preference number: 6 (lower is better)
Translates to: NSSNPFESITPG*ALNFTVFNRAR
Trigger: ACGTGCCCGATTGAAGACAGTGAAGTTTAATGCCAAACCTGGAGTGATTGATTCGAAAGGGTTACTGGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530800.5
CDS CAA 72 bp AGAAGAAGAAGAAGAAAACATACTGCAGCTCCCGATTaGGTAAAAAGCCAGTGGCTTGCTGCAATCCAGAGT +
Preference number: 6 (lower is better)
Translates to: RRRRRKHTAAPD*VKSQWLAAIQS
Trigger: ACTCTGGATTGCAGCAAGCCACTGGCTTTTTACCAAATCGGGAGCTGCAGTATGTTTTCTTCTTCTTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS TCA 72 bp CTCCCAGCTAGCTGCTGGTGTTTGAAATTCCAACTCTaGAGTGGTAGTCTGGTATCTTCTTTTAAAATGTGG +
Preference number: 6 (lower is better)
Translates to: LPASCWCLKFQL*SGSLVSSFKMW
Trigger: CCACATTTTAAAAGAAGATACCAGACTACCACTTCAGAGTTGGAATTTCAAACACCAGCAGCTAGCTGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529399.1
CDS TCA 72 bp CAGGAAGCTTGTCTTGGAAGAGGAGCATGTTATAGTTaGGTGTTGATGGATCTTACTCAAGAGGTAGCTACT +
Preference number: 6 (lower is better)
Translates to: QEACLGRGACYS*VLMDLTQEVAT
Trigger: AGTAGCTACCTCTTGAGTAAGATCCATCAACACTCAACTATAACATGCTCCTCTTCCAAGACAAGCTTCCTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529111.5
CDS TCA 72 bp TATACGTCATGCCTAAAATTTCAGGTAAGAAGGATATaGCCTCAGGCTGGAGTCAGATTGAATTCAGGCCAG +
Preference number: 6 (lower is better)
Translates to: YTSCLKFQVRRI*PQAGVRLNSGQ
Trigger: CTGGCCTGAATTCAATCTGACTCCAGCCTGAGGTCATATCCTTCTTACCTGAAATTTTAGGCATGACGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529111.5
CDS CCA 72 bp CACACCAGCAAATCAGCAAAGGTGAGAAAAGCCTTTTaGAAATTGCACACAGAAAGAAGCAGAGCTTGGATT +
Preference number: 6 (lower is better)
Translates to: HTSKSAKVRKAF*KLHTERSRAWI
Trigger: AATCCAAGCTCTGCTTCTTTCTGTGTGCAATTTCCAAAAGGCTTTTCTCACCTTTGCTGATTTGCTGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527088.1
CDS CCA 72 bp ATTCTAACTACATCTGCTGGAATAAGTAACACTGCCTaGGACTCAGTCTTCAGTTTCCTCACCTTCACGTTA +
Preference number: 6 (lower is better)
Translates to: ILTTSAGISNTA*DSVFSFLTFTL
Trigger: TAACGTGAAGGTGAGGAAACTGAAGACTGAGTCCCAGGCAGTGTTACTTATTCCAGCAGATGTAGTTAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530589.1
CDS CAA 72 bp TCATTGAATGACCCTTTCGAATCAATCACTCCAGGTTaGGCATTAAACTTCACTGTCTTCAATCGGGCACGT +
Preference number: 6 (lower is better)
Translates to: SLNDPFESITPG*ALNFTVFNRAR
Trigger: ACGTGCCCGATTGAAGACAGTGAAGTTTAATGCCAAACCTGGAGTGATTGATTCGAAAGGGTCATTCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000420775.6
ENST00000531015.5
ENST00000648622.1
ENST00000650630.1
CDS CAA 72 bp GTGGGACACATGTTCTGTTGCTACATGGTGTTGCCTTaGTTTTCTCAAGTTGAATTGCTCACAAAGTGCAGA +
Preference number: 6 (lower is better)
Translates to: VGHMFCCYMVLP*FSQVELLTKCR
Trigger: TCTGCACTTTGTGAGCAATTCAACTTGAGAAAACAAAGGCAACACCATGTAGCAACAGAACATGTGTCCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456295.2
ENST00000529111.5
CDS CAA 72 bp TCACACCAGCAAATCAGCAAAGGTGAGAAAAGCCTTTaGGAAATTGCACACAGAAAGAAGCAGAGCTTGGAT +
Preference number: 6 (lower is better)
Translates to: SHQQISKGEKSL*EIAHRKKQSLD
Trigger: ATCCAAGCTCTGCTTCTTTCTGTGTGCAATTTCCAAAAGGCTTTTCTCACCTTTGCTGATTTGCTGGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527088.1
CDS CAA 90 bp TTACGCTTGTCATTGAATGACCCTTTCGAATCAATCACTCCAGGTTaGGCATTAAACTTCACTGTCTTCAATCGGGCACGTTCCTTTCTT +
Preference number: 6 (lower is better)
Translates to: LRLSLNDPFESITPG*ALNFTVFNRARSFL
Trigger: AAGAAAGGAACGTGCCCGATTGAAGACAGTGAAGTTTAATGCCAAACCTGGAGTGATTGATTCGAAAGGGTCATTCAATGACAAGCGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000280241.12
ENST00000376104.7
ENST00000398309.6
ENST00000420775.6
ENST00000531015.5
ENST00000648622.1
ENST00000650630.1
CDS CAA 90 bp ACATGGAAATCACACCAGCAAATCAGCAAAGGTGAGAAAAGCCTTTaGGAAATTGCACACAGAAAGAAGCAGAGCTTGGATTCTGTACAG +
Preference number: 6 (lower is better)
Translates to: TWKSHQQISKGEKSL*EIAHRKKQSLDSVQ
Trigger: CTGTACAGAATCCAAGCTCTGCTTCTTTCTGTGTGCAATTTCCAAAAGGCTTTTCTCACCTTTGCTGATTTGCTGGTGTGATTTCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527088.1
CDS CAA 90 bp CAGTTTAGGAGTGGGCATGTTTTCCTGCTGTGGTTAATCTGTAGATaGCCTTGCCATCTTCTGTTTGTTTCTAGGCTCTTTCATGGATTA +
Preference number: 6 (lower is better)
Translates to: QFRSGHVFLLWLICR*PCHLLFVSRLFHGL
Trigger: TAATCCATGAAAGAGCCTAGAAACAAACAGAAGATGGCAAGGCAATCTACAGATTAACCACAGCAGGAAAACATGCCCACTCCTAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530589.1
CDS CCA 72 bp AAGTGGGTTAAGTGGGACACATGTTCTGTTGCTACATaGTGTTGCCTTTGTTTTCTCAAGTTGAATTGCTCA +
Preference number: 6 (lower is better)
Translates to: KWVKWDTCSVAT*CCLCFLKLNCS
Trigger: TGAGCAATTCAACTTGAGAAAACAAAGGCAACACCATGTAGCAACAGAACATGTGTCCCACTTAACCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456295.2
ENST00000529111.5
CDS CAA 72 bp ATACTGAAGCCTAAACCTTTAGGGCCTTTGAACAGTTaGATTTCCACAACGGTCTCCAAAATAGGTCGTCTT +
Preference number: 6 (lower is better)
Translates to: ILKPKPLGPLNS*ISTTVSKIGRL
Trigger: AAGACGACCTATTTTGGAGACCGTTGTGGAAATCAAACTGTTCAAAGGCCCTAAAGGTTTAGGCTTCAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398299.1
ENST00000398301.6
ENST00000398309.6
ENST00000418306.6
ENST00000524941.5
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS CAA 72 bp AACATCAACGATAAAGTGTTGTTGGTGCAAGCAACTTaGCAGTGGCAAATCATTGGTGTAAAACAGTCAGGG +
Preference number: 6 (lower is better)
Translates to: NINDKVLLVQAT*QWQIIGVKQSG
Trigger: CCCTGACTGTTTTACACCAATGATTTGCCACTGCAAAGTTGCTTGCACCAACAACACTTTATCGTTGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648622.1
CDS CAA 90 bp GCATATTTAAACTCCAGTAACCCTTTCGAATCAATCACTCCAGGTTaGGCATTAAACTTCACTGTCTTCAATCGGGCACGTTCCTTTCTT +
Preference number: 6 (lower is better)
Translates to: AYLNSSNPFESITPG*ALNFTVFNRARSFL
Trigger: AAGAAAGGAACGTGCCCGATTGAAGACAGTGAAGTTTAATGCCAAACCTGGAGTGATTGATTCGAAAGGGTTACTGGAGTTTAAATATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530800.5
CDS TCA 72 bp AGGTTTGTAGTTCTTATTTATGATGTGACAGACCAGTaGTCTACTTCGCCATTTCAGCATCCTAGCAAAGCT +
Preference number: 6 (lower is better)
Translates to: RFVVLIYDVTDQ*STSPFQHPSKA
Trigger: AGCTTTGCTAGGATGCTGAAATGGCGAAGTAGATCACTGGTCTGTCACATCATAAATAAGAACTACAAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472545.6
CDS CCA 72 bp TTCCATTGGTGGAGAATAAGAGTGAGTAATATCAGGTaGACCATAAGGATCAGTCATATAAATGGTAGTGGG +
Preference number: 6 (lower is better)
Translates to: FHWWRIRVSNIR*TIRISHINGSG
Trigger: CCCACTACCATTTATATGACTGATCCTTATGGTCCACCTGATATTACTCACTCTTATTCTCCACCAATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398299.1
ENST00000398301.6
ENST00000398309.6
ENST00000418306.6
ENST00000524982.5
ENST00000529111.5
ENST00000531015.5
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1
CDS TCA 72 bp AGGTTTGTAGTTCTTATTTATGATGTGACAGACCAGTaGTCTACTTCGCCATTTCAGCATCCTGGTATAACT +
Preference number: 6 (lower is better)
Translates to: RFVVLIYDVTDQ*STSPFQHPGIT
Trigger: AGTTATACCAGGATGCTGAAATGGCGAAGTAGATCACTGGTCTGTCACATCATAAATAAGAACTACAAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530260.5
CDS TCA 72 bp AGATCCACACAGAGACATATCAGAACATTATTAGTTTaGGTTCTGACTGACCTTCAGGTTGATATTGTGCTA +
Preference number: 6 (lower is better)
Translates to: RSTQRHIRTLLV*VLTDLQVDIVL
Trigger: TAGCACAATATCAACCTGAAGGTCAGTCAGAACTCAAACTAATAATGTTCTGATATGTCTCTGTGTGGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398301.6
CDS CAA 90 bp GACCAGCAATACAACACAAGAGAGAAGAAGAACCACAAATGGAGCTaGTTAACTTTCCATCATATTTGTAATGTCACTACAAGACATGTT +
Preference number: 6 (lower is better)
Translates to: DQQYNTREKKNHKWS*LTFHHICNVTTRHV
Trigger: AACATGTCTTGTAGTGACATTACAAATATGATGGAAAGTTAACAAGCTCCATTTGTGGTTCTTCTTCTCTCTTGTGTTGTATTGCTGGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529111.5
CDS CAA 72 bp CAGATGAAAGGCCCAGATTGCTCTTCAATAACAAGCTaGCATTGGTTATATATATCTTCTAAAGTATCTCCT +
Preference number: 6 (lower is better)
Translates to: QMKGPDCSSITS*HWLYISSKVSP
Trigger: AGGAGATACTTTAGAAGATATATATAACCAATGCAAGCTTGTTATTGAAGAGCAATCTGGGCCTTTCATCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000280241.12
ENST00000330014.11
ENST00000376104.7
ENST00000398309.6
ENST00000404783.7
ENST00000418306.6
ENST00000426717.6
ENST00000524982.5
ENST00000529159.1
ENST00000532653.5
ENST00000648622.1
ENST00000650630.1