RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DLEC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000008226

Ensembl transcript IDs: ENST00000308059.11, ENST00000346219.7, ENST00000440294.6, ENST00000447130.1, ENST00000469151.1, ENST00000477260.1, ENST00000478428.1

Found 742 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTaGATACCCTGGGAACTGAGTGAGGTCCCAGGCTGGAGGCGCTAC +
Preference number: 1 (lower is better)
Translates to: GVHVHRDWNGSRCRL*IPWELSEVPGWRRY
Trigger: GTAGCGCCTCCAGCCTGGGACCTCACTCAGTTCCCAGGGTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR GCA 90 bp TTGAAAGGGATACTAGCCTGCAGTGGGCATCTGTCACCGTGTGTGTaGCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTC +
Preference number: 1 (lower is better)
Translates to: LKGILACSGHLSPCV*PSGRPGYRLPTDLV
Trigger: GACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACGGTGACAGATGCCCACTGCAGGCTAGTATCCCTTTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR CCA 90 bp GATACTAGCCTGCAGTGGGCATCTGTCACCGTGTGTGTGCCCAAGTaGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTGATGGTT +
Preference number: 1 (lower is better)
Translates to: DTSLQWASVTVCVPK*EARVPLAHRSGLMV
Trigger: AACCATCAGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACGGTGACAGATGCCCACTGCAGGCTAGTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR TCA 90 bp TGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTaGTGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGGTCAG +
Preference number: 1 (lower is better)
Translates to: CPSGRPGYRLPTDLV*WFCILLVHDVLLGQ
Trigger: CTGACCCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR CCA 90 bp GTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTaGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGG +
Preference number: 1 (lower is better)
Translates to: VCAQVGGQGTACPQI*SDGFASYLSMTSFW
Trigger: CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR CCA 90 bp CTGTTTTCCTTAAGGGCCAGCCTTGAAAGGGATACTAGCCTGCAGTaGGCATCTGTCACCGTGTGTGTGCCCAAGTGGGAGGCCAGGGTA +
Preference number: 1 (lower is better)
Translates to: LFSLRASLERDTSLQ*ASVTVCVPKWEARV
Trigger: TACCCTGGCCTCCCACTTGGGCACACACACGGTGACAGATGCCCACTGCAGGCTAGTATCCCTTTCAAGGCTGGCCCTTAAGGAAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR CCA 90 bp CCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGTaGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCT +
Preference number: 1 (lower is better)
Translates to: PLPSQLSFVFTGHTE*CPCASGLEWEPLPS
Trigger: AGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCACTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR GCA 90 bp TTCCTAGCCGTGGACCGAAGGTTTTCAGGCTCAAATCGTATGAAGTaGTGGGCTGTTAAGTCTGTGAGCTCTCCAGGGTCTGGCTGGCTT +
Preference number: 1 (lower is better)
Translates to: FLAVDRRFSGSNRMK*WAVKSVSSPGSGWL
Trigger: AAGCCAGCCAGACCCTGGAGAGCTCACAGACTTAACAGCCCAGCACTTCATACGATTTGAGCCTGAAAACCTTCGGTCCACGGCTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447130.1
3UTR TCA 90 bp GCTGTGGTGTGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATaGGGGCCTAGGCTGAGACCATTGTGGAAGGGGGTTCTTCCATTC +
Preference number: 1 (lower is better)
Translates to: AVVWPVLYVSSEDIS*GPRLRPLWKGVLPF
Trigger: GAATGGAAGAACCCCCTTCCACAATGGTCTCAGCCTAGGCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCACACCACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR TCA 90 bp CTTGCCCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATaGCGTCCTTCTGGGTCAGCCTGGTCTGGAGGTAATTTGGTGGGT +
Preference number: 1 (lower is better)
Translates to: LAHRSGLMVLHPTCP*RPSGSAWSGGNLVG
Trigger: ACCCACCAAATTACCTCCAGACCAGGCTGACCCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR CCA 90 bp CTAGCCGTGGACCGAAGGTTTTCAGGCTCAAATCGTATGAAGTGCTaGGCTGTTAAGTCTGTGAGCTCTCCAGGGTCTGGCTGGCTTTTT +
Preference number: 1 (lower is better)
Translates to: LAVDRRFSGSNRMKC*AVKSVSSPGSGWLF
Trigger: AAAAAGCCAGCCAGACCCTGGAGAGCTCACAGACTTAACAGCCCAGCACTTCATACGATTTGAGCCTGAAAACCTTCGGTCCACGGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447130.1
3UTR GCA 90 bp CCAATTAAGTTTTGTTTTCACAGGGCATACGGAGTGGTGTCCATGTaGATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACCCT +
Preference number: 1 (lower is better)
Translates to: PIKFCFHRAYGVVSM*IGTGMGAAAVFEYP
Trigger: AGGGTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCACTCCGTATGCCCTGTGAAAACAAAACTTAATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR CCA 90 bp GTCCATGACGTCCTTCTGGGTCAGCCTGGTCTGGAGGTAATTTGGTaGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCAT +
Preference number: 1 (lower is better)
Translates to: VHDVLLGQPGLEVIW*VPLPSQLSFVFTGH
Trigger: ATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAATTACCTCCAGACCAGGCTGACCCAGAAGGACGTCATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR CCA 90 bp CTTGTCCATGACGTCCTTCTGGGTCAGCCTGGTCTGGAGGTAATTTaGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGG +
Preference number: 1 (lower is better)
Translates to: LVHDVLLGQPGLEVI*WVPLPSQLSFVFTG
Trigger: CCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAATTACCTCCAGACCAGGCTGACCCAGAAGGACGTCATGGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR TCA 90 bp GGTGGCAGTGGACAGATCAAGGCACTTCAACTCATTTGGAAAATGTaGACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCA +
Preference number: 1 (lower is better)
Translates to: GGSGQIKALQLIWKM*TLMTWYRSGWGVEP
Trigger: TGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTTGAAGTGCCTTGATCTGTCCACTGCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR GCA 90 bp GAGCACACTGTGAAAATCCCTCAGGTAGCATTTCTAATAATCAGCTaGTTCCTAGCCGTGGACCGAAGGTTTTCAGGCTCAAATCGTATG +
Preference number: 1 (lower is better)
Translates to: EHTVKIPQVAFLIIS*FLAVDRRFSGSNRM
Trigger: CATACGATTTGAGCCTGAAAACCTTCGGTCCACGGCTAGGAAGCAGCTGATTATTAGAAATGCTACCTGAGGGATTTTCACAGTGTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447130.1
3UTR-3UTR CCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTCATGTGCATCGGGACTaGAATGGGAGCCGCTGCCGT +
Preference number: 2 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSHVHRD*NGSRCR
Trigger: ACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATG...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR-3UTR TCA 90 bp GTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACTCTGAGGACATATCATaGGGGCCTAGGCTGAGACCA +
Preference number: 2 (lower is better)
Translates to: VVSMCIGTGMGAAAVFEYSEDIS*GPRLRP
Trigger: TGGTCTCAGCCTAGGCCCTCATGATATGTCCTCAGA...GTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR-3UTR TCA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGTGGGTGGGGTGTTaGGCCACCCATCAGACCCTC +
Preference number: 2 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTEWVGC*ATHQTL
Trigger: GAGGGTCTGATGGGTGGCTCAACACCCCACCCACTC...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR-3UTR GCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTTCCATGGATGAGAAGTaGAATGGGCATAGTAAAAGT +
Preference number: 2 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSSMDEK*NGHSKS
Trigger: ACTTTTACTATGCCCATTGCACTTCTCATCCATGGA...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR-3UTR CCA 90 bp CCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAGTGATCTCAATGTGGTaGTCTCTGCTGTGGTGTGGC +
Preference number: 2 (lower is better)
Translates to: PPIRPSLAVQDKSSLGHPVISMW*SLLWCG
Trigger: GCCACACCACAGCAGAGACCACCACATTGAGATCAC...TGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR-3UTR CCA 90 bp AAGCAATTTTCCTGCCTCAGCCTCAGCCTCCCGAGTATCTGGGATTATAGGTGTTCCATGACGTCCTTCTaGGTCAGCCTGGTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: KQFSCLSLSLPSIWDYRCSMTSF*VSLVWR
Trigger: CCTCCAGACCAGGCTGACCCAGAAGGACGTCATGGA...ACACCTATAATCCCAGATACTCGGGAGGCTGAGGCTGAGGCAGGAAAATTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR CAA 90 bp GTCCTTCTGGGTCAGCCTGGTCTGGAGGTAATTTGGTGGGTGCCTTaGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGTGG +
Preference number: 2 (lower is better)
Translates to: VLLGQPGLEVIWWVP*PSQLSFVFTGHTEW
Trigger: CCACTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAATTACCTCCAGACCAGGCTGACCCAGAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR-3UTR GCA 90 bp CCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGCGCAGACAGTCCTGCTaGTCTAGCAGCAAGGCAGTA +
Preference number: 2 (lower is better)
Translates to: PQIWSDGFASYLSMTSFWRRQSC*SSSKAV
Trigger: TACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCG...CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR-3UTR GCA 90 bp AAGCAATTTTCCTGCCTCAGCCTCAGCCTCCCGAGTATCTGGGATTATAGGTGTCTACGCAGACAGTCCTaGTGCTCTAGCAGCAAGGCA +
Preference number: 2 (lower is better)
Translates to: KQFSCLSLSLPSIWDYRCLRRQS*CSSSKA
Trigger: TGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCGTAG...ACACCTATAATCCCAGATACTCGGGAGGCTGAGGCTGAGGCAGGAAAATTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR-3UTR CCA 90 bp AAGCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAGGCTGAGACCATTGTaGAAGGGGGTTCTTCCATTC +
Preference number: 2 (lower is better)
Translates to: KQNHMGKLSTGGGGSGQIRLRPL*KGVLPF
Trigger: GAATGGAAGAACCCCCTTCCACAATGGTCTCAGCCT...GATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR-3UTR TCA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAAGTCTTCGCTATGCACTaGGTAGTGATCTCAATGTGG +
Preference number: 2 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQVFAMH*VVISMW
Trigger: CCACATTGAGATCACTACTCAGTGCATAGCGAAGAC...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR-3UTR CCA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAAGTAGTGATCTCAATGTaGTGGTCTCTGCTGTGGTGT +
Preference number: 2 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQVVISM*WSLLWC
Trigger: ACACCACAGCAGAGACCACCACATTGAGATCACTAC...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR-3UTR CCA 90 bp AAGCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCCTAATTTTGCCATACTaGTCTTCGCTATGCACTGAG +
Preference number: 2 (lower is better)
Translates to: KQNHMGKLSTGGGGSGQILILPY*SSLCTE
Trigger: CTCAGTGCATAGCGAAGACCAGTATGGCAAAATTAG...GATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR CCA 72 bp CTGCAGTGGGCATCTGTCACCGTGTGTGTGCCCAAGTaGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGT +
Preference number: 3 (lower is better)
Translates to: LQWASVTVCVPK*EARVPLAHRSG
Trigger: ACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACGGTGACAGATGCCCACTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR TCA 72 bp GTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTaGATACCCTGGGAACTGAGTGAGGTCCCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: VHRDWNGSRCRL*IPWELSEVPGW
Trigger: CCAGCCTGGGACCTCACTCAGTTCCCAGGGTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR GCA 72 bp ATACTAGCCTGCAGTGGGCATCTGTCACCGTGTGTGTaGCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACA +
Preference number: 3 (lower is better)
Translates to: ILACSGHLSPCV*PSGRPGYRLPT
Trigger: TGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACGGTGACAGATGCCCACTGCAGGCTAGTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR GCA 72 bp GGTCCCAGGCTGGAGGCGCTACGCAGACAGTCCTGCTaGTCTAGCAGCAAGGCAGTAACACCACAAAAGCAA +
Preference number: 3 (lower is better)
Translates to: GPRLEALRRQSC*SSSKAVTPQKQ
Trigger: TTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCGTAGCGCCTCCAGCCTGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR CCA 72 bp CATACGGAGTGGTGTCCATGTGCATCGGGACTGGAATaGGAGCCGCTGCCGTCTTTGAATACCCTGGGAACT +
Preference number: 3 (lower is better)
Translates to: HTEWCPCASGLE*EPLPSLNTLGT
Trigger: AGTTCCCAGGGTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCACTCCGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR TCA 72 bp GGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTaGTGGTTTTGCATCCTACTTGTCCATGACGTCCTT +
Preference number: 3 (lower is better)
Translates to: GRPGYRLPTDLV*WFCILLVHDVL
Trigger: AAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR CCA 72 bp CAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTaGTCTGATGGTTTTGCATCCTACTTGTCCATGACG +
Preference number: 3 (lower is better)
Translates to: QVGGQGTACPQI*SDGFASYLSMT
Trigger: CGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR-3UTR CAA 90 bp CCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCACCTAGGCTGAGACCATaGTGGAAGGGGGTTCTTCCA +
Preference number: 3 (lower is better)
Translates to: PPIRPSLAVQDKSSLGHPPRLRP*WKGVLP
Trigger: TGGAAGAACCCCCTTCCACAATGGTCTCAGCCTAGG...TGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR GCA 72 bp TTTTGTTTTCACAGGGCATACGGAGTGGTGTCCATGTaGATCGGGACTGGAATGGGAGCCGCTGCCGTCTTT +
Preference number: 3 (lower is better)
Translates to: FCFHRAYGVVSM*IGTGMGAAAVF
Trigger: AAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCACTCCGTATGCCCTGTGAAAACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR CCA 72 bp GACCGAAGGTTTTCAGGCTCAAATCGTATGAAGTGCTaGGCTGTTAAGTCTGTGAGCTCTCCAGGGTCTGGC +
Preference number: 3 (lower is better)
Translates to: DRRFSGSNRMKC*AVKSVSSPGSG
Trigger: GCCAGACCCTGGAGAGCTCACAGACTTAACAGCCCAGCACTTCATACGATTTGAGCCTGAAAACCTTCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447130.1
3UTR-3UTR CAA 90 bp AAGCAATTTTCCTGCCTCAGCCTCAGCCTCCCGAGTATCTGGGATTATAGGTGTTGGTCTGGAGGTAATTaGGTGGGTGCCTTTGCCCAG +
Preference number: 3 (lower is better)
Translates to: KQFSCLSLSLPSIWDYRCWSGGN*VGAFAQ
Trigger: CTGGGCAAAGGCACCCACCAAATTACCTCCAGACCA...ACACCTATAATCCCAGATACTCGGGAGGCTGAGGCTGAGGCAGGAAAATTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR-3UTR CAA 90 bp CCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTGATGGTTTTGGGCACTTCAACTCATTaGGAAAATGTGAACACTGAT +
Preference number: 3 (lower is better)
Translates to: PKWEARVPLAHRSGLMVLGTSTH*ENVNTD
Trigger: ATCAGTGTTCACATTTTCCAAATGAGTTGAAGTGCC...CAAAACCATCAGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR TCA 72 bp TGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATaGGGGCCTAGGCTGAGACCATTGTGGAAGGGGGTT +
Preference number: 3 (lower is better)
Translates to: WPVLYVSSEDIS*GPRLRPLWKGV
Trigger: AACCCCCTTCCACAATGGTCTCAGCCTAGGCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR GCA 72 bp GTGGACCGAAGGTTTTCAGGCTCAAATCGTATGAAGTaGTGGGCTGTTAAGTCTGTGAGCTCTCCAGGGTCT +
Preference number: 3 (lower is better)
Translates to: VDRRFSGSNRMK*WAVKSVSSPGS
Trigger: AGACCCTGGAGAGCTCACAGACTTAACAGCCCAGCACTTCATACGATTTGAGCCTGAAAACCTTCGGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447130.1
3UTR CCA 72 bp AGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGTaGTGTCCATGTGCATCGGGACTGGAATGGGAGCCG +
Preference number: 3 (lower is better)
Translates to: SQLSFVFTGHTE*CPCASGLEWEP
Trigger: CGGCTCCCATTCCAGTCCCGATGCACATGGACACCACTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR CCA 72 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTaGCAGTGGACAGATCAAGGCACTTCAACTCATTTG +
Preference number: 3 (lower is better)
Translates to: AKPHGKTQHWWW*QWTDQGTSTHL
Trigger: CAAATGAGTTGAAGTGCCTTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR-3UTR CAA 90 bp CCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGTTTCCAAGACTAATTTaGCCATACTGGTCTTCGCTA +
Preference number: 3 (lower is better)
Translates to: PQIWSDGFASYLSMTSFWFPRLI*PYWSSL
Trigger: TAGCGAAGACCAGTATGGCAAAATTAGTCTTGGAAA...CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR TCA 72 bp AAGACTAATTTTGCCATACTGGTCTTCGCTATGCACTaGGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGG +
Preference number: 3 (lower is better)
Translates to: KTNFAILVFAMH*VVISMWWSLLW
Trigger: CCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAATTAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTGCTGCTGGACCCGGCTaGTGGCGAAGTTGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSAAGPG*WRSWRP
Trigger: TGGGCGCCAACTTCGCCACCAGCCGGGTCCAGCAGC...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTGGTAGGGCCCCAGCATaGCCTGGGAAAAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSGRAPA*PGKSEG
Trigger: TCCCTCACTTTTCCCAGGGCATGCTGGGGCCCTACC...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTACCCCAGAGCAGGGCTaGTCGGGAATGAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSTPEQG*SGMRSL
Trigger: CAGTGACCTCATTCCCGAGCAGCCCTGCTCTGGGGT...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp CCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTGATGGTTTTGCCCGGAGCCGCAGGGTaGAGGACTTCTCACCGAGCA +
Preference number: 4 (lower is better)
Translates to: PKWEARVPLAHRSGLMVLPGAAG*RTSHRA
Trigger: TGCTCGGTGAGAAGTCCTGCACCCTGCGGCTCCGGG...CAAAACCATCAGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTCCAGGCTGGCTGGAGTaGAGTGGTGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSPGWLE*SGVISA
Trigger: AGCCGAGATCACACCACTGCACTCCAGCCAGCCTGG...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTTCCCAGAGCGAAGTATaGCGTGGAAGGCGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSSQSEV*RGRRED
Trigger: GTCCTCCCGCCTTCCACGCCATACTTCGCTCTGGGA...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp GTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACGCAGGTCCTGGCTTGTaGGGCCAGGGACACCCCCAG +
Preference number: 4 (lower is better)
Translates to: VVSMCIGTGMGAAAVFEYAGPGL*GQGHPQ
Trigger: CTGGGGGTGTCCCTGGCCCCACAAGCCAGGACCTGC...GTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTGATGGTTTTGCGCTGCCGCGGGCCTTaGTCAAGCTTGCGCTCACTT +
Preference number: 4 (lower is better)
Translates to: PKWEARVPLAHRSGLMVLRCRGP*SSLRSL
Trigger: AAGTGAGCGCAAGCTTGATCAAGGCCCGCGGCAGCG...CAAAACCATCAGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTTCCAGATGCTGGCAGTaGAGGGCCTCCAAGGTGATG +
Preference number: 4 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSSRCWQ*RASKVM
Trigger: CATCACCTTGGAGGCCCTGCACTGCCAGCATCTGGA...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTTCACTGGCCTGGCACTaGAATTCCATACTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSSLAWH*NSILPP
Trigger: CGGCGGCAGTATGGAATTCCAGTGCCAGGCCAGTGA...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTGTCAGCTTCAGGTGGTaGGTGGTCACCAGCTCACTC +
Preference number: 4 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSVSFRW*VVTSSL
Trigger: GAGTGAGCTGGTGACCACCCACCACCTGAAGCTGAC...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTCAGCACTGGTGGTGGTaGCAGTGGACAGATCAAGGC +
Preference number: 4 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSQHWWW*QWTDQG
Trigger: GCCTTGATCTGTCCACTGCCACCACCACCAGTGCTG...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAACGCAGACGAAGCAGCTaGGGCTCGGGACGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQRRRSS*GSGRCA
Trigger: GGCGCAGCGTCCCGAGCCTCAGCTGCTTCGTCTGCG...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGCGCAGACGAAGCAGCTaGGGCTCGGGACGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVRRRSS*GSGRCA
Trigger: GGCGCAGCGTCCCGAGCCTCAGCTGCTTCGTCTGCG...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTACCCCCTCATGTGCCTaGAGGATGACTGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSTPSCA*RMTEMS
Trigger: GCTCATCTCAGTCATCCTGCAGGCACATGAGGGGGT...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGTCCAGGTGGGCTGGCTaGGGCTGCTGGACCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWSRWAG*GCWTRL
Trigger: CAGCCGGGTCCAGCAGCCCCAGCCAGCCCACCTGGA...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTAGCGGCTGGTCGTGGTaGTGTTCTGCAGCGCAATTA +
Preference number: 4 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSSGWSW*CSAAQL
Trigger: TAATTGCGCTGCAGAACACCACCACGACCAGCCGCT...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTGATGGTTTTGGGTAGCGGCTGGTCGTaGTGGTGTTCTGCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: PKWEARVPLAHRSGLMVLGSGWS*WCSAAQ
Trigger: TTGCGCTGCAGAACACCACCACGACCAGCCGCTACC...CAAAACCATCAGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTTCCCCCACAGGTATCTaGTGGGTGACTTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSSPTGI*WVTCCC
Trigger: ACAACAGCAAGTCACCCATCAGATACCTGTGGGGGA...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGGGCGGCCTCCGGGCCTaGAGGGGGATCAGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVGGLRA*RGIRSV
Trigger: CACACTTCTGATCCCCCTGCAGGCCCGGAGGCCGCC...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTTTGGCCAGGTGCTCTTaGATCCGCACTGTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSLARCS*IRTVFS
Trigger: GCTAAAGACAGTGCGGATGCAAGAGCACCTGGCCAA...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTAAAGGGATACTAGCCTaGAGTGGGCATCTGTCACCG +
Preference number: 4 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSKGILA*SGHLSP
Trigger: CGGTGACAGATGCCCACTGCAGGCTAGTATCCCTTT...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTGTCCTTTATGCTGGCTGGGGCTGCTaGACCCGGCTGGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: LSSDLNVVVSAVVWPVLYAGWGC*TRLVAK
Trigger: CTTCGCCACCAGCCGGGTCCAGCAGCCCCAGCCAGC...ATAAAGGACAGGCCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTGTCCTTTATTCCAGGTGGGCTGGCTaGGGCTGCTGGACCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LSSDLNVVVSAVVWPVLYSRWAG*GCWTRL
Trigger: CAGCCGGGTCCAGCAGCCCCAGCCAGCCCACCTGGA...ATAAAGGACAGGCCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGGACTTCCAGGTGGGCTaGCTGGGGCTGCTGGACCCG +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVDFQVG*LGLLDP
Trigger: CGGGTCCAGCAGCCCCAGCCAGCCCACCTGGAAGTC...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp AGCATGTCCCGGGGCCAGCTCAAACACCGAAGGCAGGATTCCAAAAGGAGGTTGGAGCGAAGTATGGCGTaGAAGGCGGGAGGACTCGCA +
Preference number: 4 (lower is better)
Translates to: SMSRGQLKHRRQDSKRRLERSMA*KAGGLA
Trigger: TGCGAGTCCTCCCGCCTTCCACGCCATACTTCGCTC...CAACCTCCTTTTGGAATCCTGCCTTCGGTGTTTGAGCTGGCCCCGGGACATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGGCAGGTCCTGGCTTGTaGGGCCAGGGACACCCCCAG +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVAGPGL*GQGHPQ
Trigger: CTGGGGGTGTCCCTGGCCCCACAAGCCAGGACCTGC...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTGATGGTTTTGCCAGCAGGCCATGTTTaGGGGAGACTGTCACCATGC +
Preference number: 4 (lower is better)
Translates to: PKWEARVPLAHRSGLMVLPAGHV*GRLSPC
Trigger: GCATGGTGACAGTCTCCCCCAAACATGGCCTGCTGG...CAAAACCATCAGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTACTCAGCACTGGTGGTaGTGGCAGTGGACAGATCAA +
Preference number: 4 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSTQHWW*WQWTDQ
Trigger: TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGT...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp GTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACCTCCAGCCTGGCTCATaGCCCGCTCATTTTCCGCAA +
Preference number: 4 (lower is better)
Translates to: VVSMCIGTGMGAAAVFEYLQPGS*PAHFPQ
Trigger: TTGCGGAAAATGAGCGGGTCATGAGCCAGGCTGGAG...GTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGGCAGGGCCTCCAAGGTaGTGTCCACCCTGCACTCCC +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVAGPPR*CPPCTP
Trigger: GGGAGTGCAGGGTGGACATCACCTTGGAGGCCCTGC...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGTGGTCCTCAGGGAGCTaGTGGGGCAGCCCACCGCTG +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVWSSGS*WGSPPL
Trigger: CAGCGGTGGGCTGCCCCATCAGCTCCCTGAGGACCA...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CTGCTGTGGTGTGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATGAGGGCACCCTGGGAACTGAGTaGGGTCCCAGGCTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: LLWCGLSFMLALRTYHEGTLGTE*GPRLEA
Trigger: CGCCTCCAGCCTGGGACCTCACTCAGTTCCCAGGGT...GCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCACACCACAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATaGCGTCCTTCTGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PKWEARVPLAHRSGLMVLHPTCP*RPSGSA
Trigger: GGCTGACCCAGAAGGACGTCATGGACAAGTAGGATG...CAAAACCATCAGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCGGCGGGGCCGGGCTaGGAAGCTGTAGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSAAGPG*EAVVEG
Trigger: GCCTTCCACTACAGCTTCGCAGCCCGGCCCCGCCGC...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp CCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAAGGACGGTCTCCAGATaGTGGCAGTGCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PPIRPSLAVQDKSSLGHPRTVSR*WQCRAS
Trigger: GGAGGCCCTGCACTGCCAGCATCTGGAGACCGTCCT...TGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp AAGCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCGCTGGACCCGGCTGGTaGCGAAGTTGGCGCCCACAT +
Preference number: 4 (lower is better)
Translates to: KQNHMGKLSTGGGGSGQIAGPGW*RSWRPH
Trigger: ATGTGGGCGCCAACTTCGCCACCAGCCGGGTCCAGC...GATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGGCTGGGGCTGCTaGACCCGGCTGGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSAGWGC*TRLVAK
Trigger: CTTCGCCACCAGCCGGGTCCAGCAGCCCCAGCCAGC...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTGTCCTTTATGACTTCCAGGTGGGCTaGCTGGGGCTGCTGGACCCG +
Preference number: 4 (lower is better)
Translates to: LSSDLNVVVSAVVWPVLYDFQVG*LGLLDP
Trigger: CGGGTCCAGCAGCCCCAGCCAGCCCACCTGGAAGTC...ATAAAGGACAGGCCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAACAGGCGGAGCTCCTTTaGGTGGCCTGGCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQQAELL*VAWPLL
Trigger: GAGCAGTGGCCAGGCCACCCAAAGGAGCTCCGCCTG...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCAGGCGGAGCTCCTTTaGGTGGCCTGGCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWQAELL*VAWPLL
Trigger: GAGCAGTGGCCAGGCCACCCAAAGGAGCTCCGCCTG...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGGGGCCAGGAGCTCTGTaGTCCTGGCTCGCCCCATCT +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVGPGAL*SWLAPS
Trigger: AGATGGGGCGAGCCAGGACCACAGAGCTCCTGGCCC...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAACACAGCGGCCTTGGCTaGCTCCTGCTGGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQHSGLG*LLLAHQ
Trigger: CTGATGGGCCAGCAGGAGCCAGCCAAGGCCGCTGTG...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTGTCCTTTATAGGCCACAGCGGCCTTaGCTGGCTCCTGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LSSDLNVVVSAVVWPVLYRPQRP*LAPAGP
Trigger: TGGGCCAGCAGGAGCCAGCCAAGGCCGCTGTGGCCT...ATAAAGGACAGGCCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTGATGGTTTTGACAGGGCATACGGAGTaGTGTCCATGTGCATCGGGA +
Preference number: 4 (lower is better)
Translates to: PKWEARVPLAHRSGLMVLTGHTE*CPCASG
Trigger: TCCCGATGCACATGGACACCACTCCGTATGCCCTGT...CAAAACCATCAGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTGTCCTTTATCCTCACTGGGCTCTATaGCCCCTGTGCCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LSSDLNVVVSAVVWPVLYPHWAL*PLCRAP
Trigger: TGGAGCCCGGCACAGGGGTCATAGAGCCCAGTGAGG...ATAAAGGACAGGCCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp AAGCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCTGGCTGGGAGCTGGCTaGCGTTCCGGATCTGGATGG +
Preference number: 4 (lower is better)
Translates to: KQNHMGKLSTGGGGSGQIWLGAG*RSGSGW
Trigger: CCATCCAGATCCGGAACGTCAGCCAGCTCCCAGCCA...GATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGCCTCAGTGGCACCGCTaGGCCAAAGTCCAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVPQWHR*AKVQAE
Trigger: CTCCGCCTGGACTTTGGCTCAGCGGTGCCACTGAGG...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAAAGGGCTGCTCGGGAATaGGGTCACTGGCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQRAARE*GHWPGT
Trigger: AGTGCCAGGCCAGTGACCTCATTCCCGAGCAGCCCT...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp GTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACACTCCTAGGCACAAGTaGTCCTCTTGCCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VVSMCIGTGMGAAAVFEYTPRHK*SSCLSL
Trigger: CAGGCTGAGGCAAGAGGATCACTTGTGCCTAGGAGT...GTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCGCGGCGGGGCCGGGCTaGGAAGCTGTAGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVAAGPG*EAVVEG
Trigger: GCCTTCCACTACAGCTTCGCAGCCCGGCCCCGCCGC...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGGCGAGATATCTTGGGTaGGCAGCGAGGAGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVARYLG*AARRGA
Trigger: TGCGCCCCTCCTCGCTGCGCACCCAAGATATCTCGC...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp CCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCACTGGGCTCTCCTTCATaGGCCATGTGGCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PPIRPSLAVQDKSSLGHPLGSPS*AMWLGA
Trigger: AGCTCCCAGCCACATGGCGCATGAAGGAGAGCCCAG...TGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGCCCACCGCTGCCATGTaGACTGGGATGACTTCCGGC +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVPTAAM*TGMTSG
Trigger: GCCGGAAGTCATCCCAGTGCACATGGCAGCGGTGGG...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGCCCGGAGCCGCAGGGTaGAGGACTTCTCACCGAGCA +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVPGAAG*RTSHRA
Trigger: TGCTCGGTGAGAAGTCCTGCACCCTGCGGCTCCGGG...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTGCTGTGGTGTGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATGAGGGCGCCCACATTGTCCCCTaGCACTCGTTGGTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: LLWCGLSFMLALRTYHEGAHIVP*HSLVRD
Trigger: GTCCCGGACCAACGAGTGCCAGGGGACAATGTGGGC...GCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCACACCACAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGGGCTGGTGGCGAAGTTaGCGCCCACATTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWGWWRS*RPHCPL
Trigger: CAGGGGACAATGTGGGCGCCAACTTCGCCACCAGCC...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCATCCACGAACTCCTCGTaGCGCTCATTCTCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PPIRPSLAVQDKSSLGHPSTNSS*RSFSLP
Trigger: CGGCAGCGAGAATGAGCGCCACGAGGAGTTCGTGGA...TGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAACATGCGCCATGTGGCTaGGAGCTGGCTGACGTTCCG +
Preference number: 4 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQHAPCG*ELADVP
Trigger: CGGAACGTCAGCCAGCTCCCAGCCACATGGCGCATG...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGCGGAGCTCCTTTGGGTaGCCTGGCCACTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVRSSFG*PGHCSV
Trigger: CACAGAGCAGTGGCCAGGCCACCCAAAGGAGCTCCG...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAGGGTGCCGAACCTCATaGCTGGTTCCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPIRPSLAVQDKSSLGHPGCRTS*LVPSGP
Trigger: AGGCCCAGAAGGAACCAGCCATGAGGTTCGGCACCC...TGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAAGCTCATTCCCGGCTTaGTCCCGCAGCGGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: PPIRPSLAVQDKSSLGHPSSFPA*SRSGKG
Trigger: ACCTTTCCCGCTGCGGGACCAAGCCGGGAATGAGCT...TGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAGCCCGTGCTTGGGCCTaGGTGATATGTCTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: PPIRPSLAVQDKSSLGHPARAWA*VICLSN
Trigger: GTTGGAGAGACATATCACTCAGGCCCAAGCACGGGC...TGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGAGGTTTCTCCAGGCATaGGGGGCTGCAGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWRFLQA*GAAGWA
Trigger: AGCCCAACCTGCAGCCCCTCATGCCTGGAGAAACCT...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTCCTCACTGGGCTCTATaGCCCCTGTGCCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAPHWAL*PLCRAP
Trigger: TGGAGCCCGGCACAGGGGTCATAGAGCCCAGTGAGG...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGCACTCCCCCAGAGAGTaGAGCTGGCCACTCGAAGGC +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVHSPRE*SWPLEG
Trigger: GCCTTCGAGTGGCCAGCTTCACTCTCTGGGGGAGTG...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGCAGGGCCTCCAAGGTaGTGTCCACCCTGCACTCCC +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAAGPPR*CPPCTP
Trigger: GGGAGTGCAGGGTGGACATCACCTTGGAGGCCCTGC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGCTCCCACCGTGCAGATaGGGTTGTCCCAGTACTCGC +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVLPPCR*GCPSTR
Trigger: GCGAGTACTGGGACAACCTCATCTGCACGGTGGGAG...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCATGTGCACTGGGATaGCTTCCGGCAGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWPCALG*LPAAGL
Trigger: GAGACCTGCTGCCGGAAGTCATCCCAGTGCACATGG...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGTGGTCCTCAGGGAGCTaGTGGGGCAGCCCACCGCTG +
Preference number: 4 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTWSSGS*WGSPPL
Trigger: CAGCGGTGGGCTGCCCCATCAGCTCCCTGAGGACCA...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGTGGCTCGCCCCATCTTaGGAAACGGAGAAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWWLAPS*ETEKGL
Trigger: CAGGCCCTTCTCCGTTTCTCAAGATGGGGCGAGCCA...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp AAGCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCCATGAGGGCCTAGGCTaGGACCATTGTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: KQNHMGKLSTGGGGSGQIHEGLG*DHCGRG
Trigger: CCCCCTTCCACAATGGTCTCAGCCTAGGCCCTCATG...GATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp TGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGGAGTGGGTGGGGTGTTaGGCCACCCATCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: WWVPLPSQLSFVFTGHTEEWVGC*ATHQTL
Trigger: GAGGGTCTGATGGGTGGCTCAACACCCCACCCACTC...CTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CTGCTGTGGTGTGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATGAGGGCCTGGTCTTGAACTCCTaGCCTCGTGATCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: LLWCGLSFMLALRTYHEGLVLNS*PRDPPA
Trigger: GGCGGGAGGATCACGAGGTCAGGAGTTCAAGACCAG...GCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCACACCACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp GTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACTTCCGCAATAGCCCGTaGTTGGGCCTGAGTGATATG +
Preference number: 4 (lower is better)
Translates to: VVSMCIGTGMGAAAVFEYFRNSP*LGLSDM
Trigger: CATATCACTCAGGCCCAAGCACGGGCTATTGCGGAA...GTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGGGGTGGCCTGGCCACTaGTCTGTGCTGCAATCAGAG +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVGWPGH*SVLQSE
Trigger: CTCTGATTGCAGCACAGAGCAGTGGCCAGGCCACCC...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp CCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGCCCACCGCTGCCATGTaGACTGGGATGACTTCCGGC +
Preference number: 4 (lower is better)
Translates to: PQIWSDGFASYLSMTSFWPTAAM*TGMTSG
Trigger: GCCGGAAGTCATCCCAGTGCACATGGCAGCGGTGGG...CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGGGGCAGCCCACCGCTaGCATGTGCACTGGGATGAC +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAGAAHR*HVHWDD
Trigger: GTCATCCCAGTGCACATGGCAGCGGTGGGCTGCCCC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAACCCACCGCAAAGTCCTaGAGGCGATGCCTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQPTAKS*RRCLFP
Trigger: AGGGAAGAGGCATCGCCTGCAGGACTTTGCGGTGGG...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGACCCCAGAGCAGGGCTaGTCGGGAATGAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVTPEQG*SGMRSL
Trigger: CAGTGACCTCATTCCCGAGCAGCCCTGCTCTGGGGT...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGCCCACATTGTCCCCTaGCACTCGTTGGTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVAHIVP*HSLVRD
Trigger: GTCCCGGACCAACGAGTGCCAGGGGACAATGTGGGC...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGGACCCGGCTGGTaGCGAAGTTGGCGCCCACAT +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSAGPGW*RSWRPH
Trigger: ATGTGGGCGCCAACTTCGCCACCAGCCGGGTCCAGC...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCGCTGCTGGACCCGGCTaGTGGCGAAGTTGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVAAGPG*WRSWRP
Trigger: TGGGCGCCAACTTCGCCACCAGCCGGGTCCAGCAGC...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCACGAATCTGCTGCAGCTaGTCCACGAACTCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: PPIRPSLAVQDKSSLGHPRICCS*STNSSW
Trigger: CCACGAGGAGTTCGTGGACCAGCTGCAGCAGATTCG...TGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCTCGCAGGTAGCGGCTaGTCGTGGTGGTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWLAGSG*SWWCSA
Trigger: TGCAGAACACCACCACGACCAGCCGCTACCTGCGAG...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TCAGGCTCAAATCGTATGAAGTGCTGGGCTGTTAAGTCTGTGAGCTCTCCAGGGCTCGCAGGTAGCGGCTaGTCGTGGTGGTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SGSNRMKCWAVKSVSSPGLAGSG*SWWCSA
Trigger: TGCAGAACACCACCACGACCAGCCGCTACCTGCGAG...CCCTGGAGAGCTCACAGACTTAACAGCCCAGCACTTCATACGATTTGAGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS-3UTR CCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTAATCGTATGAAGTGCTaGGCTGTTAAGTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSNRMKC*AVKSVS
Trigger: GCTCACAGACTTAACAGCCCAGCACTTCATACGATT...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp AAGCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCCATGTGGCTGGGAGCTaGCTGACGTTCCGGATCTGG +
Preference number: 4 (lower is better)
Translates to: KQNHMGKLSTGGGGSGQIHVAGS*LTFRIW
Trigger: CCAGATCCGGAACGTCAGCCAGCTCCCAGCCACATG...GATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCATGTGGCTGGGAGCTaGCTGACGTTCCGGATCTGG +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWHVAGS*LTFRIW
Trigger: CCAGATCCGGAACGTCAGCCAGCTCCCAGCCACATG...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTGCTGTGGTGTGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATGAGGGCACGGTCTCCAGATGCTaGCAGTGCAGGGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LLWCGLSFMLALRTYHEGTVSRC*QCRASK
Trigger: CTTGGAGGCCCTGCACTGCCAGCATCTGGAGACCGT...GCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCACACCACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGAGGAGCTTGCCCCAGTaGAACTGGGTAGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVRSLPQ*NWVGRS
Trigger: GCTCCTGCCTACCCAGTTCCACTGGGGCAAGCTCCT...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGGGGTGCCGAACCTCATaGCTGGTTCCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVGCRTS*LVPSGP
Trigger: AGGCCCAGAAGGAACCAGCCATGAGGTTCGGCACCC...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAATCTCCTCCGGAGACCTaGGTGCCGAACCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQSPPET*VPNLMA
Trigger: AGCCATGAGGTTCGGCACCCAGGTCTCCGGAGGAGA...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGCTGATACAGTACAGGTaGCCGGAGGGCACCCCCTCA +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVLIQYR*PEGTPS
Trigger: TGAGGGGGTGCCCTCCGGCCACCTGTACTGTATCAG...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTGATGGTTTTGATGAGGTCACTGGCCTaGCACTGGAATTCCATACTG +
Preference number: 4 (lower is better)
Translates to: PKWEARVPLAHRSGLMVLMRSLA*HWNSIL
Trigger: CAGTATGGAATTCCAGTGCCAGGCCAGTGACCTCAT...CAAAACCATCAGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGGGCCAGGAGCTCTGTaGTCCTGGCTCGCCCCATCT +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSGPGAL*SWLAPS
Trigger: AGATGGGGCGAGCCAGGACCACAGAGCTCCTGGCCC...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp GTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACCTTCCACCACCATCGTaGACTCGTACAGCTCACTAC +
Preference number: 4 (lower is better)
Translates to: VVSMCIGTGMGAAAVFEYLPPPS*TRTAHY
Trigger: GTAGTGAGCTGTACGAGTCCACGATGGTGGTGGAAG...GTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGAGTGAGGTCCCAGGCTaGAGGCGCTACGCAGACAGT +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWSEVPG*RRYADS
Trigger: ACTGTCTGCGTAGCGCCTCCAGCCTGGGACCTCACT...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAAGCATCGGGACTGGAATaGGAGCCGCTGCCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQASGLE*EPLPSL
Trigger: CAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGC...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTCGCTGCCGCGGGCCTTaGTCAAGCTTGCGCTCACTT +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSARCRGP*SSLRSL
Trigger: AAGTGAGCGCAAGCTTGATCAAGGCCCGCGGCAGCG...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGTCACTGGAGGCAACCTaGCAAGGCTCTCGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWSLEAT*QGSRGP
Trigger: AGGACCTCGAGAGCCTTGTCAGGTTGCCTCCAGTGA...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGAGGTTTCTCCAGGCATaGGGGGCTGCAGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVRFLQA*GAAGWA
Trigger: AGCCCAACCTGCAGCCCCTCATGCCTGGAGAAACCT...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTTGGCTGGGAGCTGGCTaGCGTTCCGGATCTGGATGG +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSWLGAG*RSGSGW
Trigger: CCATCCAGATCCGGAACGTCAGCCAGCTCCCAGCCA...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTCACTCCCCCAGAGAGTaGAGCTGGCCACTCGAAGGC +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSHSPRE*SWPLEG
Trigger: GCCTTCGAGTGGCCAGCTTCACTCTCTGGGGGAGTG...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCCCTCAGTGGCACCGCTaGGCCAAAGTCCAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVPQWHR*AKVQAE
Trigger: CTCCGCCTGGACTTTGGCTCAGCGGTGCCACTGAGG...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTAGGGCTGCTCGGGAATaGGGTCACTGGCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSRAARE*GHWPGT
Trigger: AGTGCCAGGCCAGTGACCTCATTCCCGAGCAGCCCT...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTGTCCTTTATCAGCTGCTTGTCCGCTaGGGCTGTCTCCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: LSSDLNVVVSAVVWPVLYQLLVR*GCLLLT
Trigger: TGTGAGGAGGAGACAGCCTCAGCGGACAAGCAGCTG...ATAAAGGACAGGCCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGAGCTCCCGAATCTGCTaGAGCTGGTCCACGAACTCC +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVSSRIC*SWSTNS
Trigger: GGAGTTCGTGGACCAGCTGCAGCAGATTCGGGAGCT...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAACCAGGCATGAGGGGCTaGAGGTTGGGCTTCATGATC +
Preference number: 4 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQPGMRG*RLGFMI
Trigger: GATCATGAAGCCCAACCTGCAGCCCCTCATGCCTGG...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp AAGCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCGAGTTTGTGGCTTTCTaGCCCAGGCGGAGCAGACCA +
Preference number: 4 (lower is better)
Translates to: KQNHMGKLSTGGGGSGQIEFVAF*PRRSRP
Trigger: TGGTCTGCTCCGCCTGGGGCAGAAAGCCACAAACTC...GATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTAGGACGGTCTCCAGATaGTGGCAGTGCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSRTVSR*WQCRAS
Trigger: GGAGGCCCTGCACTGCCAGCATCTGGAGACCGTCCT...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCGGGGCAGCCCACCGCTaGCATGTGCACTGGGATGAC +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVGAAHR*HVHWDD
Trigger: GTCATCCCAGTGCACATGGCAGCGGTGGGCTGCCCC...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp CCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGCTCCGGAGACCTGGGTaGCGAACCTCATGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PQIWSDGFASYLSMTSFWLRRPG*RTSWLV
Trigger: AACCAGCCATGAGGTTCGGCACCCAGGTCTCCGGAG...CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp CCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCATGCTGGCACTGGAGCTaGCCTCAACTGATGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PPIRPSLAVQDKSSLGHPCWHWS*PQLMSQ
Trigger: CTGACTCATCAGTTGAGGGCAGCTCCAGTGCCAGCA...TGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGGCAGGGACCACCACCTaGTTGGGGCTGATACAGTAC +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWAGTTT*LGLIQY
Trigger: GTACTGTATCAGCCCCAAGCAGGTGGTGGTCCCTGC...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp CTGCTGTGGTGTGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATGAGGGCTGTAGATGGTACTGCTaGCCCCAGCAGGGACCACCA +
Preference number: 4 (lower is better)
Translates to: LLWCGLSFMLALRTYHEGCRWYC*PQQGPP
Trigger: TGGTGGTCCCTGCTGGGGGCAGCAGTACCATCTACA...GCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCACACCACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGTGTAGATGGTACTGCTaGCCCCAGCAGGGACCACCA +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWCRWYC*PQQGPP
Trigger: TGGTGGTCCCTGCTGGGGGCAGCAGTACCATCTACA...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGCCCACCGCAAAGTCCTaGAGGCGATGCCTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVPTAKS*RRCLFP
Trigger: AGGGAAGAGGCATCGCCTGCAGGACTTTGCGGTGGG...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp CTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTGTCCTTTATGCTTGGAGCACCAGCTaGTTGTCCGCTGAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LSSDLNVVVSAVVWPVLYAWSTS*LSAEAV
Trigger: GACAGCCTCAGCGGACAAGCAGCTGGTGCTCCAAGC...ATAAAGGACAGGCCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTGTCCTTTATTCCCCTGGCACTCGTTaGTCCGGGACGCTAAAGACC +
Preference number: 4 (lower is better)
Translates to: LSSDLNVVVSAVVWPVLYSPGTR*SGTLKT
Trigger: GGTCTTTAGCGTCCCGGACCAACGAGTGCCAGGGGA...ATAAAGGACAGGCCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGGCTGGTGGCGAAGTTaGCGCCCACATTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSGWWRS*RPHCPL
Trigger: CAGGGGACAATGTGGGCGCCAACTTCGCCACCAGCC...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGAAGTGCGAGATATCTTaGGTGCGCAGCGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWKCEIS*VRSEEG
Trigger: CCCCTCCTCGCTGCGCACCCAAGATATCTCGCACTT...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGGAGCGAAGTATGGCGTaGAAGGCGGGAGGACTCGCA +
Preference number: 4 (lower is better)
Translates to: PQIWSDGFASYLSMTSFWERSMA*KAGGLA
Trigger: TGCGAGTCCTCCCGCCTTCCACGCCATACTTCGCTC...CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGAGCGAAGTATGGCGTaGAAGGCGGGAGGACTCGCA +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVERSMA*KAGGLA
Trigger: TGCGAGTCCTCCCGCCTTCCACGCCATACTTCGCTC...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp GTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACAACTGGACAATGTACTaGCAGGTCATTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: VVSMCIGTGMGAAAVFEYNWTMY*QVIPGA
Trigger: GGCTCCTGGAATGACCTGCCAGTACATTGTCCAGTT...GTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTGTCCTTTATTCACACAGCAGGTCCTaGCTTGTGGGGCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: LSSDLNVVVSAVVWPVLYSHSRS*LVGPGT
Trigger: TGTCCCTGGCCCCACAAGCCAGGACCTGCTGTGTGA...ATAAAGGACAGGCCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTCATGCGCCATGTGGCTaGGAGCTGGCTGACGTTCCG +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSHAPCG*ELADVP
Trigger: CGGAACGTCAGCCAGCTCCCAGCCACATGGCGCATG...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTTCCTGGAGGGAGACTaGGCTCTCCTTCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVFLEGD*ALLHAP
Trigger: TGGCGCATGAAGGAGAGCCCAGTCTCCCTCCAGGAA...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTGTCCTTTATAGGAGCTTGCCCCAGTaGAACTGGGTAGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LSSDLNVVVSAVVWPVLYRSLPQ*NWVGRS
Trigger: GCTCCTGCCTACCCAGTTCCACTGGGGCAAGCTCCT...ATAAAGGACAGGCCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTGCTGTGGTGTGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATGAGGGCCTGGCACTCCTCACTTaGGCCCAGCAGGCCATGTTT +
Preference number: 4 (lower is better)
Translates to: LLWCGLSFMLALRTYHEGLALLT*AQQAMF
Trigger: AAACATGGCCTGCTGGGCCCAAGTGAGGAGTGCCAG...GCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCACACCACAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGCTGGCACTCCTCACTTaGGCCCAGCAGGCCATGTTT +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVLALLT*AQQAMF
Trigger: AAACATGGCCTGCTGGGCCCAAGTGAGGAGTGCCAG...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGCTCCTTTGGGTGGCCTaGCCACTGCTCTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: WWVPLPSQLSFVFTGHTELLWVA*PLLCAA
Trigger: TGCAGCACAGAGCAGTGGCCAGGCCACCCAAAGGAG...CTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGCTCCTTTGGGTGGCCTaGCCACTGCTCTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVLLWVA*PLLCAA
Trigger: TGCAGCACAGAGCAGTGGCCAGGCCACCCAAAGGAG...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTCGGAGCTCCTTTGGGTaGCCTGGCCACTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSRSSFG*PGHCSV
Trigger: CACAGAGCAGTGGCCAGGCCACCCAAAGGAGCTCCG...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGCCAGCTGCTCTCGCTTaGCCAGGTGCTCTTGCATCC +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVPAALA*PGALAS
Trigger: GGATGCAAGAGCACCTGGCCAAGCGAGAGCAGCTGG...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGTCTCCTCCGGAGACCTaGGTGCCGAACCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVSPPET*VPNLMA
Trigger: AGCCATGAGGTTCGGCACCCAGGTCTCCGGAGGAGA...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCACCCTATTGCTGGCACTaGAGCTGCCCTCAACTGATG +
Preference number: 4 (lower is better)
Translates to: PPIRPSLAVQDKSSLGHPPYCWH*SCPQLM
Trigger: CATCAGTTGAGGGCAGCTCCAGTGCCAGCAATAGGG...TGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGGTGCCACCCTATTGCTaGCACTGGAGCTGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWVPPYC*HWSCPQ
Trigger: TTGAGGGCAGCTCCAGTGCCAGCAATAGGGTGGCAC...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTCACTGGCCTGGCACTaGAATTCCATACTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVSLAWH*NSILPP
Trigger: CGGCGGCAGTATGGAATTCCAGTGCCAGGCCAGTGA...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp AAGCAATTTTCCTGCCTCAGCCTCAGCCTCCCGAGTATCTGGGATTATAGGTGTGTGTGTGTGCCCAAGTaGGAGGCCAGGGTACCGCTT +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLSLPSIWDYRCVCVPK*EARVPL
Trigger: AAGCGGTACCCTGGCCTCCCACTTGGGCACACACAC...ACACCTATAATCCCAGATACTCGGGAGGCTGAGGCTGAGGCAGGAAAATTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGCTCCGTTGTCCAGGCTaGCTGGAGTGCAGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: PQIWSDGFASYLSMTSFWLRCPG*LECSGV
Trigger: CACACCACTGCACTCCAGCCAGCCTGGACAACGGAG...CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR CAA 72 bp TGCCCACAGATCTGGTCTGATGGTTTTGCATCCTACTaGTCCATGACGTCCTTCTGGGTCAGCCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: CPQIWSDGFASY*SMTSFWVSLVW
Trigger: CCAGACCAGGCTGACCCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGCGGAAGACGCCGGTaGGCAAGTGCGAGATATCTT +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVCGRRR*ASARYL
Trigger: AAGATATCTCGCACTTGCTCACCGGCGTCTTCCGCA...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGGCCGATGACCTCGGCTaGGTACAAGTTGCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: PQIWSDGFASYLSMTSFWADDLG*VQVAED
Trigger: GTCTTCCGCAACTTGTACTCAGCCGAGGTCATCGGC...CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGTCACTTCGTCGCCGATaGCCTCGGCTGAGTACAAGT +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWSLRRR*PRLSTS
Trigger: ACTTGTACTCAGCCGAGGTCATCGGCGACGAAGTGA...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGCCCGTGCTTGGGCCTaGGTGATATGTCTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVARAWA*VICLSN
Trigger: GTTGGAGAGACATATCACTCAGGCCCAAGCACGGGC...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGTCACTGGAGGCAACCTaGCAAGGCTCTCGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PQIWSDGFASYLSMTSFWSLEAT*QGSRGP
Trigger: AGGACCTCGAGAGCCTTGTCAGGTTGCCTCCAGTGA...CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTAAGCTTCTTCCTGCATaGATCTTCAAGCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSKLLPA*IFKLLV
Trigger: AACAAGAAGCTTGAAGATTCATGCAGGAAGAAGCTT...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGCGGTTGCAATGGCCTTaGAACTTAGTGGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVRLQWP*NLVVAS
Trigger: GCTGGCCACCACTAAGTTTCAAGGCCATTGCAACCG...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp TGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGGGGCTGTTAAGTCTGTaGGCTCTCCAGGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: WWVPLPSQLSFVFTGHTEGLLSL*ALQGLA
Trigger: AGCCAGACCCTGGAGAGCTCACAGACTTAACAGCCC...CTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGGGCTGTTAAGTCTGTaGGCTCTCCAGGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVGLLSL*ALQGLA
Trigger: AGCCAGACCCTGGAGAGCTCACAGACTTAACAGCCC...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTCTCCCACCGTGCAGATaGGGTTGTCCCAGTACTCGC +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSALPPCR*GCPSTR
Trigger: GCGAGTACTGGGACAACCTCATCTGCACGGTGGGAG...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTCCATGTGCACTGGGATaGCTTCCGGCAGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAPCALG*LPAAGL
Trigger: GAGACCTGCTGCCGGAAGTCATCCCAGTGCACATGG...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp TGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGATGGCTGAATTCCGATaGACTGGAGGGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: WWVPLPSQLSFVFTGHTEMAEFR*TGGAWG
Trigger: TCCCCAGGCCCCTCCAGTTCATCGGAATTCAGCCAT...CTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGTGCTGTCCAAGCTCATaGAACCCAGGGCGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: PQIWSDGFASYLSMTSFWCCPSS*NPGRSQ
Trigger: CTGGCTACGCCCTGGGTTTCATGAGCTTGGACAGCA...CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGTGCTGTCCAAGCTCATaGAACCCAGGGCGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVCCPSS*NPGRSQ
Trigger: CTGGCTACGCCCTGGGTTTCATGAGCTTGGACAGCA...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTTGGCTCGCCCCATCTTaGGAAACGGAGAAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSWLAPS*ETEKGL
Trigger: CAGGCCCTTCTCCGTTTCTCAAGATGGGGCGAGCCA...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGGAGCCTCAGGGCTGGTaGGGCAACATGTATCTCTCA +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWEPQGW*GNMYLS
Trigger: TGAGAGATACATGTTGCCTCACCAGCCCTGAGGCTC...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTCATGAGGGCCTAGGCTaGGACCATTGTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAHEGLG*DHCGRG
Trigger: CCCCCTTCCACAATGGTCTCAGCCTAGGCCCTCATG...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCGCGAGATATCTTGGGTaGGCAGCGAGGAGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVARYLG*AARRGA
Trigger: TGCGCCCCTCCTCGCTGCGCACCCAAGATATCTCGC...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGAGCTCCCGAATCTGCTaGAGCTGGTCCACGAACTCC +
Preference number: 4 (lower is better)
Translates to: WWVPLPSQLSFVFTGHTESSRIC*SWSTNS
Trigger: GGAGTTCGTGGACCAGCTGCAGCAGATTCGGGAGCT...CTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTATTCCTTGGTTGACTTaGTTTCTTGAGAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSIPWLT*FLERFS
Trigger: AGAGAACCTCTCAAGAAAGCAAGTCAACCAAGGAAT...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp GTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACTCCAAAGCAATCAGCTaGCCAATTCCTATGGTCACC +
Preference number: 4 (lower is better)
Translates to: VVSMCIGTGMGAAAVFEYSKAIS*PIPMVT
Trigger: GGTGACCATAGGAATTGGGCAGCTGATTGCTTTGGA...GTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTCTGGGCTCTCCTTCATaGGCCATGTGGCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSLGSPS*AMWLGA
Trigger: AGCTCCCAGCCACATGGCGCATGAAGGAGAGCCCAG...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp AAGCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCCTGGCCACTGCTCTGTaGTGCAATCAGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KQNHMGKLSTGGGGSGQILATAL*CNQSSP
Trigger: AGGAGAGCTCTGATTGCAGCACAGAGCAGTGGCCAG...GATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGGGTGGCCTGGCCACTaGTCTGTGCTGCAATCAGAG +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAGWPGH*SVLQSE
Trigger: CTCTGATTGCAGCACAGAGCAGTGGCCAGGCCACCC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGTCTCGCTTGGCCAGGTaGTCTTGCATCCGCACTGTC +
Preference number: 4 (lower is better)
Translates to: WWVPLPSQLSFVFTGHTESRLAR*SCIRTV
Trigger: GACAGTGCGGATGCAAGAGCACCTGGCCAAGCGAGA...CTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGGTAGGGCCCCAGCATaGCCTGGGAAAAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAGRAPA*PGKSEG
Trigger: TCCCTCACTTTTCCCAGGGCATGCTGGGGCCCTACC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGACCCCCTCATGTGCCTaGAGGATGACTGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVTPSCA*RMTEMS
Trigger: GCTCATCTCAGTCATCCTGCAGGCACATGAGGGGGT...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGCTTGGAGCACCAGCTaGTTGTCCGCTGAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAAWSTS*LSAEAV
Trigger: GACAGCCTCAGCGGACAAGCAGCTGGTGCTCCAAGC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp CCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGGATGGAGGTTGGGGGTaGATTGGCGGATCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: PQIWSDGFASYLSMTSFWDGGWG*IGGSCF
Trigger: GAAGCACGATCCGCCAATGCACCCCCAACCTCCATC...CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp CTGCTGTGGTGTGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATGAGGGCCGCAGACAGTCCTGCTaGTCTAGCAGCAAGGCAGTA +
Preference number: 4 (lower is better)
Translates to: LLWCGLSFMLALRTYHEGRRQSC*SSSKAV
Trigger: TACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCG...GCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCACACCACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp AAGCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCCTACGCAGACAGTCCTaGTGCTCTAGCAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: KQNHMGKLSTGGGGSGQILRRQS*CSSSKA
Trigger: TGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCGTAG...GATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCCTGTCACCGTGTGTGTaGCCAAGTGGGAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVLSPCV*PSGRPG
Trigger: CCCTGGCCTCCCACTTGGGCACACACACGGTGACAG...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTTCCACGAACTCCTCGTaGCGCTCATTCTCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSSTNSS*RSFSLP
Trigger: CGGCAGCGAGAATGAGCGCCACGAGGAGTTCGTGGA...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGGTAGCGGCTGGTCGTaGTGGTGTTCTGCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSGSGWS*WCSAAQ
Trigger: TTGCGCTGCAGAACACCACCACGACCAGCCGCTACC...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp AATCAGCTGCTTCCTAGCCGTGGACCGAAGGTTTTCAGGCTCAAATCGTATGAATCCCAGAGCGAAGTATaGCGTGGAAGGCGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: NQLLPSRGPKVFRLKSYESQSEV*RGRRED
Trigger: GTCCTCCCGCCTTCCACGCCATACTTCGCTCTGGGA...TTCATACGATTTGAGCCTGAAAACCTTCGGTCCACGGCTAGGAAGCAGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGGGGATCAGAAGTGTGTaGGCTGACTGGGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWGIRSV*ADWVST
Trigger: AGTGGAGACCCAGTCAGCCCACACACTTCTGATCCC...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTTCACACAGCAGGTCCTaGCTTGTGGGGCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSSHSRS*LVGPGT
Trigger: TGTCCCTGGCCCCACAAGCCAGGACCTGCTGTGTGA...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTTCCTCAGGCCTTTCCTaGAGGGAGACTGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSASSGLS*RETGLS
Trigger: GGAGAGCCCAGTCTCCCTCCAGGAAAGGCCTGAGGA...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTACGGTCTCCAGATGCTaGCAGTGCAGGGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSATVSRC*QCRASK
Trigger: CTTGGAGGCCCTGCACTGCCAGCATCTGGAGACCGT...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGAACTCCAACTTGAGCTaGCACTCCTCACTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWNSNLS*HSSLGP
Trigger: GGGCCCAAGTGAGGAGTGCCAGCTCAAGTTGGAGTT...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGCAAGGGAGGGCCAGATaGGTCAGCTCTTCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVQGRAR*VSSSWV
Trigger: TACCCAGGAAGAGCTGACCCATCTGGCCCTCCCTTG...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGCCACTTGCAGTCCCTaGGGCTTCCCAGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVATCSP*GFPEMP
Trigger: AGGCATTTCTGGGAAGCCCCAGGGACTGCAAGTGGC...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGGGGCAGGAGGCATGTTaGGAAGGCTGGTCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWGQEAC*EGWSFC
Trigger: GCAAAAAGACCAGCCTTCCCAACATGCCTCCTGCCC...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAGCAGCTCCTTTCCCGTaGGATAGCATGCTCTCCATA +
Preference number: 4 (lower is better)
Translates to: PPIRPSLAVQDKSSLGHPAAPFP*DSMLSI
Trigger: TATGGAGAGCATGCTATCCCACGGGAAAGGAGCTGC...TGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTCGCTGCCATGTGCACTaGGATGACTTCCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSRCHVH*DDFRQQ
Trigger: CTGCTGCCGGAAGTCATCCCAGTGCACATGGCAGCG...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTCGCTGCCATGTGCACTaGGATGACTTCCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSARCHVH*DDFRQQ
Trigger: CTGCTGCCGGAAGTCATCCCAGTGCACATGGCAGCG...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTCTGATACAGTACAGGTaGCCGGAGGGCACCCCCTCA +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSLIQYR*PEGTPS
Trigger: TGAGGGGGTGCCCTCCGGCCACCTGTACTGTATCAG...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGGCTTCAGGTGGTGGGTaGTCACCAGCTCACTCAGCA +
Preference number: 4 (lower is better)
Translates to: WWVPLPSQLSFVFTGHTEASGGG*SPAHSA
Trigger: TGCTGAGTGAGCTGGTGACCACCCACCACCTGAAGC...CTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp AAGCAATTTTCCTGCCTCAGCCTCAGCCTCCCGAGTATCTGGGATTATAGGTGTGGGGCACCACCTGAGTaGTCTGGTTGGTGTACTCCA +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLSLPSIWDYRCGAPPE*SGWCTP
Trigger: TGGAGTACACCAACCAGACCACTCAGGTGGTGCCCC...ACACCTATAATCCCAGATACTCGGGAGGCTGAGGCTGAGGCAGGAAAATTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTCATGTGCATCGGGACTaGAATGGGAGCCGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAHVHRD*NGSRCR
Trigger: ACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATG...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTGCTGTGGTGTGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATGAGGGCGGTCTGGAGGTAATTTaGTGGGTGCCTTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LLWCGLSFMLALRTYHEGGLEVI*WVPLPS
Trigger: GCTGGGCAAAGGCACCCACCAAATTACCTCCAGACC...GCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCACACCACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTGTCCTTTATTGCGGAAGACGCCGGTaGGCAAGTGCGAGATATCTT +
Preference number: 4 (lower is better)
Translates to: LSSDLNVVVSAVVWPVLYCGRRR*ASARYL
Trigger: AAGATATCTCGCACTTGCTCACCGGCGTCTTCCGCA...ATAAAGGACAGGCCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp AAGCAATTTTCCTGCCTCAGCCTCAGCCTCCCGAGTATCTGGGATTATAGGTGTTCACTTCGTCGCCGATaGCCTCGGCTGAGTACAAGT +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLSLPSIWDYRCSLRRR*PRLSTS
Trigger: ACTTGTACTCAGCCGAGGTCATCGGCGACGAAGTGA...ACACCTATAATCCCAGATACTCGGGAGGCTGAGGCTGAGGCAGGAAAATTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTCTCCAGCCTGGCTCATaGCCCGCTCATTTTCCGCAA +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSLQPGS*PAHFPQ
Trigger: TTGCGGAAAATGAGCGGGTCATGAGCCAGGCTGGAG...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp TGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGGCAGGTTGGGCTTCATaGTCTGCCAGTAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: WWVPLPSQLSFVFTGHTEAGWAS*SASRRP
Trigger: TGGCCTTCTACTGGCAGATCATGAAGCCCAACCTGC...CTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGGAGAAAAGCTCAGGATaGACTCGTGGTCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWEKSSG*TRGLCG
Trigger: CCCACACAGACCACGAGTTCATCCTGAGCTTTTCTC...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp AAGCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCACCAAACTGAAGGGCTaGGACGTTGATGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: KQNHMGKLSTGGGGSGQITKLKG*DVDDEG
Trigger: GCCCTCATCATCAACGTCTCAGCCCTTCAGTTTGGT...GATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGACCAAACTGAAGGGCTaGGACGTTGATGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWTKLKG*DVDDEG
Trigger: GCCCTCATCATCAACGTCTCAGCCCTTCAGTTTGGT...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGCGGAGCAGACCAAACTaGAGGGCTGAGACGTTGATG +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVRSRPN*RAETLM
Trigger: CATCAACGTCTCAGCCCTTCAGTTTGGTCTGCTCCG...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CTGCTGTGGTGTGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATGAGGGCCAGTCAACTCCAACTTaGGCTGGCACTCCTCACTTG +
Preference number: 4 (lower is better)
Translates to: LLWCGLSFMLALRTYHEGQSTPT*AGTPHL
Trigger: CAAGTGAGGAGTGCCAGCTCAAGTTGGAGTTGACTG...GCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCACACCACAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTTTCATGCCTGACACGTaGCAAGGGAGGGCCAGATGG +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAFMPDT*QGRARW
Trigger: CCATCTGGCCCTCCCTTGTCACGTGTCAGGCATGAA...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp AAGCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCATGCCCTGGGAAAAGTaGGGGAAGAAAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: KQNHMGKLSTGGGGSGQIMPWEK*GKKAAP
Trigger: AGGAGCTGCTTTCTTCCCTCACTTTTCCCAGGGCAT...GATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCCAGCTGCTTGTCCGCTaGGGCTGTCTCCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVQLLVR*GCLLLT
Trigger: TGTGAGGAGGAGACAGCCTCAGCGGACAAGCAGCTG...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CTGCTGTGGTGTGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATGAGGGCCACTACTCCTGGCAGTaGAGAAAACCTGCAAGGCGA +
Preference number: 4 (lower is better)
Translates to: LLWCGLSFMLALRTYHEGHYSWQ*RKPARR
Trigger: TCGCCTTGCAGGTTTTCTTCACTGCCAGGAGTAGTG...GCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCACACCACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTCTGAGGACATATCATaGGGGCCTAGGCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVSEDIS*GPRLRP
Trigger: TGGTCTCAGCCTAGGCCCTCATGATATGTCCTCAGA...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp CCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGGGCCTTGATCAAGCTTaGGCTCACTTCGTCGCCGAT +
Preference number: 4 (lower is better)
Translates to: PQIWSDGFASYLSMTSFWGLDQA*AHFVAD
Trigger: ATCGGCGACGAAGTGAGCGCAAGCTTGATCAAGGCC...CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTTCCGCAATAGCCCGTaGTTGGGCCTGAGTGATATG +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVFRNSP*LGLSDM
Trigger: CATATCACTCAGGCCCAAGCACGGGCTATTGCGGAA...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTCCAGGCATGAGGGGCTaGAGGTTGGGCTTCATGATC +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSPGMRG*RLGFMI
Trigger: GATCATGAAGCCCAACCTGCAGCCCCTCATGCCTGG...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGAGTTTGTGGCTTTCTaGCCCAGGCGGAGCAGACCA +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSEFVAF*PRRSRP
Trigger: TGGTCTGCTCCGCCTGGGGCAGAAAGCCACAAACTC...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTTCCAGATGCTGGCAGTaGAGGGCCTCCAAGGTGATG +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSSRCWQ*RASKVM
Trigger: CATCACCTTGGAGGCCCTGCACTGCCAGCATCTGGA...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAACCAGTGGCTTCTTCATaGCTGACACGTGACAAGGGA +
Preference number: 4 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQPVASS*LTRDKG
Trigger: TCCCTTGTCACGTGTCAGGCATGAAGAAGCCACTGG...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGATGGTAATGGCCACTTaGAGTCCCTGGGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVMVMAT*SPWGFP
Trigger: TGGGAAGCCCCAGGGACTGCAAGTGGCCATTACCAT...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGCTGGCCACTGCTCTGTaGTGCAATCAGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVLATAL*CNQSSP
Trigger: AGGAGAGCTCTGATTGCAGCACAGAGCAGTGGCCAG...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTTCTCGCTTGGCCAGGTaGTCTTGCATCCGCACTGTC +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSASRLAR*SCIRTV
Trigger: GACAGTGCGGATGCAAGAGCACCTGGCCAAGCGAGA...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTCCATAAAATCCAGCTaGTCTCGCTTGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVSIKSS*SRLARC
Trigger: GCACCTGGCCAAGCGAGAGCAGCTGGATTTTATGGA...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCCTCCGGAGACCTGGGTaGCGAACCTCATGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVLRRPG*RTSWLV
Trigger: AACCAGCCATGAGGTTCGGCACCCAGGTCTCCGGAG...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCAGGGACCACCACCTaGTTGGGGCTGATACAGTAC +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSAGTTT*LGLIQY
Trigger: GTACTGTATCAGCCCCAAGCAGGTGGTGGTCCCTGC...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGGTACACTCCACCTTGTaGAGGATCTCAGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: WWVPLPSQLSFVFTGHTEVHSTL*RISGLS
Trigger: GCTCAGCCCTGAGATCCTGCACAAGGTGGAGTGTAC...CTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGACTGGAATTCCATACTaGCGCCGTAGTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVTGIPY*RRSPAP
Trigger: TGGAGCTGGACTACGGCGGCAGTATGGAATTCCAGT...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp AAGCAATTTTCCTGCCTCAGCCTCAGCCTCCCGAGTATCTGGGATTATAGGTGTGCGTTTTGGAGCTCCTaGTCTCCATGGCAACCGAGA +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLSLPSIWDYRCAFWSS*SPWQPR
Trigger: TCTCGGTTGCCATGGAGACCAGGAGCTCCAAAACGC...ACACCTATAATCCCAGATACTCGGGAGGCTGAGGCTGAGGCAGGAAAATTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGAAGACCTCCGCGTTTTaGAGCTCCTGGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: PQIWSDGFASYLSMTSFWKTSAF*SSWSPW
Trigger: CCATGGAGACCAGGAGCTCCAAAACGCGGAGGTCTT...CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTAAGTGCGAGATATCTTaGGTGCGCAGCGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSKCEIS*VRSEEG
Trigger: CCCCTCCTCGCTGCGCACCCAAGATATCTCGCACTT...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTCGAATCTGCTGCAGCTaGTCCACGAACTCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSARICCS*STNSSW
Trigger: CCACGAGGAGTTCGTGGACCAGCTGCAGCAGATTCG...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCCTCGCAGGTAGCGGCTaGTCGTGGTGGTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVLAGSG*SWWCSA
Trigger: TGCAGAACACCACCACGACCAGCCGCTACCTGCGAG...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCCCAGAGCGAAGTATaGCGTGGAAGGCGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVSQSEV*RGRRED
Trigger: GTCCTCCCGCCTTCCACGCCATACTTCGCTCTGGGA...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp AGCATGTCCCGGGGCCAGCTCAAACACCGAAGGCAGGATTCCAAAAGGAGGTTGAATCGTATGAAGTGCTaGGCTGTTAAGTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: SMSRGQLKHRRQDSKRRLNRMKC*AVKSVS
Trigger: GCTCACAGACTTAACAGCCCAGCACTTCATACGATT...CAACCTCCTTTTGGAATCCTGCCTTCGGTGTTTGAGCTGGCCCCGGGACATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGAACTCGTGGTCTGTGTaGGGGCTTAGAACCCCCTTT +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVNSWSV*GLRTPF
Trigger: AAAGGGGGTTCTAAGCCCCCACACAGACCACGAGTT...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGCGTTCCGGATCTGGATaGAGTTTGTGGCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVRSGSG*SLWLSA
Trigger: GGCAGAAAGCCACAAACTCCATCCAGATCCGGAACG...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTTTCCTGGAGGGAGACTaGGCTCTCCTTCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAFLEGD*ALLHAP
Trigger: TGGCGCATGAAGGAGAGCCCAGTCTCCCTCCAGGAA...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCCTCAGGCCTTTCCTaGAGGGAGACTGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVSSGLS*RETGLS
Trigger: GGAGAGCCCAGTCTCCCTCCAGGAAAGGCCTGAGGA...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGATGCAGAATTCTGCTTaGTGTCCGAGGAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVMQNSA*CPRSLP
Trigger: GGGCAAGCTCCTCGGACACCAAGCAGAATTCTGCAT...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGATGCAGAATTCTGCTTaGTGTCCGAGGAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWMQNSA*CPRSLP
Trigger: GGGCAAGCTCCTCGGACACCAAGCAGAATTCTGCAT...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTCCAGCAGGCCATGTTTaGGGGAGACTGTCACCATGC +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSPAGHV*GRLSPC
Trigger: GCATGGTGACAGTCTCCCCCAAACATGGCCTGCTGG...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGTTGGTGAGAATGAGCTaGCGAGTCACACGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVLVRMS*RVTRVL
Trigger: GAGGACCCGTGTGACTCGCCAGCTCATTCTCACCAA...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGCCAGCTGCTCTCGCTTaGCCAGGTGCTCTTGCATCC +
Preference number: 4 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTPAALA*PGALAS
Trigger: GGATGCAAGAGCACCTGGCCAAGCGAGAGCAGCTGG...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGGGATGTCACAGGGGCTaGAGTTATTCAGGCGAAGGG +
Preference number: 4 (lower is better)
Translates to: PQIWSDGFASYLSMTSFWGCHRG*SYSGEG
Trigger: CCCTTCGCCTGAATAACTCCAGCCCCTGTGACATCC...CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCAGCTCATTCCCGGCTTaGTCCCGCAGCGGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVSSFPA*SRSGKG
Trigger: ACCTTTCCCGCTGCGGGACCAAGCCGGGAATGAGCT...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGCCCTATTGCTGGCACTaGAGCTGCCCTCAACTGATG +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVPYCWH*SCPQLM
Trigger: CATCAGTTGAGGGCAGCTCCAGTGCCAGCAATAGGG...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGCCACCCTATTGCTaGCACTGGAGCTGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAVPPYC*HWSCPQ
Trigger: TTGAGGGCAGCTCCAGTGCCAGCAATAGGGTGGCAC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTTCAGGTGGTGGGTaGTCACCAGCTCACTCAGCA +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSASGGG*SPAHSA
Trigger: TGCTGAGTGAGCTGGTGACCACCCACCACCTGAAGC...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGGGGCACCACCTGAGTaGTCTGGTTGGTGTACTCCA +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAGAPPE*SGWCTP
Trigger: TGGAGTACACCAACCAGACCACTCAGGTGGTGCCCC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTGTCCTTTATAGGTTGGGGGTGCATTaGCGGATCGTGCTTCTAGCA +
Preference number: 4 (lower is better)
Translates to: LSSDLNVVVSAVVWPVLYRLGVH*RIVLLA
Trigger: TGCTAGAAGCACGATCCGCCAATGCACCCCCAACCT...ATAAAGGACAGGCCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAAGGCTGAGACCATTGTaGAAGGGGGTTCTTCCATTC +
Preference number: 4 (lower is better)
Translates to: PPIRPSLAVQDKSSLGHPRLRPL*KGVLPF
Trigger: GAATGGAAGAACCCCCTTCCACAATGGTCTCAGCCT...TGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGTGGTATAGGAGTGGGTaGGGTGTTGAGCCACCCATC +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVWYRSG*GVEPPI
Trigger: GATGGGTGGCTCAACACCCCACCCACTCCTATACCA...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTTCTGGGTCAGCCTaGTCTGGAGGTAATTTGGTG +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWPSGSA*SGGNLV
Trigger: CACCAAATTACCTCCAGACCAGGCTGACCCAGAAGG...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGGATACTAGCCTGCAGTaGGCATCTGTCACCGTGTGT +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVDTSLQ*ASVTVC
Trigger: ACACACGGTGACAGATGCCCACTGCAGGCTAGTATC...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp TGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGCCTTTAGGTGCAGAGTaGAACGGCACTGTATCGGTG +
Preference number: 4 (lower is better)
Translates to: WWVPLPSQLSFVFTGHTEPLGAE*NGTVSV
Trigger: CACCGATACAGTGCCGTTTCACTCTGCACCTAAAGG...CTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp AGGTTTTCAGGCTCAAATCGTATGAAGTGCTGGGCTGTTAAGTCTGTGAGCTCTGGGCTGTTAAGTCTGTaGGCTCTCCAGGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RFSGSNRMKCWAVKSVSSGLLSL*ALQGLA
Trigger: AGCCAGACCCTGGAGAGCTCACAGACTTAACAGCCC...AGAGCTCACAGACTTAACAGCCCAGCACTTCATACGATTTGAGCCTGAAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS-3UTR TCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTCGGAGCAGACCAAACTaGAGGGCTGAGACGTTGATG +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSARSRPN*RAETLM
Trigger: CATCAACGTCTCAGCCCTTCAGTTTGGTCTGCTCCG...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGAGCTCTTCCTGGGTATaGGCAGTCAACTCCAACTTG +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWSSSWV*AVNSNL
Trigger: CAAGTTGGAGTTGACTGCTCATACCCAGGAAGAGCT...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTTCATGCCTGACACGTaGCAAGGGAGGGCCAGATGG +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVFMPDT*QGRARW
Trigger: CCATCTGGCCCTCCCTTGTCACGTGTCAGGCATGAA...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGTGTTGGCACAGCCTGTaGTGTCAATGCACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PQIWSDGFASYLSMTSFWCWHSL*CQCTAA
Trigger: AGCAGCTGTGCATTGACATCACAGGCTGTGCCAACA...CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCATGGCTGAATTCCGATaGACTGGAGGGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVMAEFR*TGGAWG
Trigger: TCCCCAGGCCCCTCCAGTTCATCGGAATTCAGCCAT...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTTGCCTGCAGGATGACTaGGATGAGCTTCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSCLQDD*DELLCH
Trigger: GTGGCACAGAAGCTCATCTCAGTCATCCTGCAGGCA...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTTGCCTGCAGGATGACTaGGATGAGCTTCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSACLQDD*DELLCH
Trigger: GTGGCACAGAAGCTCATCTCAGTCATCCTGCAGGCA...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGTCTGAGGACATATCATaGGGGCCTAGGCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVSEDIS*GPRLRP
Trigger: TGGTCTCAGCCTAGGCCCTCATGATATGTCCTCAGA...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGGTCGTGGTGGTGTTCTaGAGCGCAATTACCATCTCA +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWVVVVF*SAITIS
Trigger: TGAGATGGTAATTGCGCTGCAGAACACCACCACGAC...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TCAGGCTCAAATCGTATGAAGTGCTGGGCTGTTAAGTCTGTGAGCTCTCCAGGGGTCGTGGTGGTGTTCTaGAGCGCAATTACCATCTCA +
Preference number: 4 (lower is better)
Translates to: SGSNRMKCWAVKSVSSPGVVVVF*SAITIS
Trigger: TGAGATGGTAATTGCGCTGCAGAACACCACCACGAC...CCCTGGAGAGCTCACAGACTTAACAGCCCAGCACTTCATACGATTTGAGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS-3UTR GCA 90 bp AAGCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCGGGAGACTGTCACCATaGAGAATTCTGCTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: KQNHMGKLSTGGGGSGQIGRLSP*RILLGV
Trigger: GACACCAAGCAGAATTCTGCATGGTGACAGTCTCCC...GATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp TGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGGGGGCTTCCCAGAAATaGCTAGAACCAGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: WWVPLPSQLSFVFTGHTEGASQK*LEPVAS
Trigger: AGAAGCCACTGGTTCTAGGCATTTCTGGGAAGCCCC...CTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTATGGTAATGGCCACTTaGAGTCCCTGGGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAMVMAT*SPWGFP
Trigger: TGGGAAGCCCCAGGGACTGCAAGTGGCCATTACCAT...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTAGATGTAGATGGTACTaGTGCCCCCAGCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSARCRWY*CPQQGP
Trigger: TGGTCCCTGCTGGGGGCAGCAGTACCATCTACATCT...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTAGATGTAGATGGTACTaGTGCCCCCAGCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSRCRWY*CPQQGP
Trigger: TGGTCCCTGCTGGGGGCAGCAGTACCATCTACATCT...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTACACTCCACCTTGTaGAGGATCTCAGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAVHSTL*RISGLS
Trigger: GCTCAGCCCTGAGATCCTGCACAAGGTGGAGTGTAC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGTTCAAGCAATTTTCCTaGCTCAGCCTCAGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVFKQFS*LSLSLP
Trigger: CGGGAGGCTGAGGCTGAGGCAGGAAAATTGCTTGAA...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCGTTTTGGAGCTCCTaGTCTCCATGGCAACCGAGA +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSAFWSS*SPWQPR
Trigger: TCTCGGTTGCCATGGAGACCAGGAGCTCCAAAACGC...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTAAGACCTCCGCGTTTTaGAGCTCCTGGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAKTSAF*SSWSPW
Trigger: CCATGGAGACCAGGAGCTCCAAAACGCGGAGGTCTT...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTAGCGGCTGGTCGTGGTaGTGTTCTGCAGCGCAATTA +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSSGWSW*CSAAQL
Trigger: TAATTGCGCTGCAGAACACCACCACGACCAGCCGCT...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp GAAAATCCCTCAGGTAGCATTTCTAATAATCAGCTGCTTCCTAGCCGTGGACCGAGCGGCTGGTCGTGGTaGTGTTCTGCAGCGCAATTA +
Preference number: 4 (lower is better)
Translates to: ENPSGSISNNQLLPSRGPSGWSW*CSAAQL
Trigger: TAATTGCGCTGCAGAACACCACCACGACCAGCCGCT...CGGTCCACGGCTAGGAAGCAGCTGATTATTAGAAATGCTACCTGAGGGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS-3UTR CCA 90 bp ATTTCTAATAATCAGCTGCTTCCTAGCCGTGGACCGAAGGTTTTCAGGCTCAAAGGTAGCGGCTGGTCGTaGTGGTGTTCTGCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: ISNNQLLPSRGPKVFRLKGSGWS*WCSAAQ
Trigger: TTGCGCTGCAGAACACCACCACGACCAGCCGCTACC...TTTGAGCCTGAAAACCTTCGGTCCACGGCTAGGAAGCAGCTGATTATTAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGGGATCAGAAGTGTGTaGGCTGACTGGGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSGIRSV*ADWVST
Trigger: AGTGGAGACCCAGTCAGCCCACACACTTCTGATCCC...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGCTCAGGATGAACTCGTaGTCTGTGTGGGGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: WWVPLPSQLSFVFTGHTELRMNS*SVWGLR
Trigger: TCTAAGCCCCCACACAGACCACGAGTTCATCCTGAG...CTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGCTCAGGATGAACTCGTaGTCTGTGTGGGGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVLRMNS*SVWGLR
Trigger: TCTAAGCCCCCACACAGACCACGAGTTCATCCTGAG...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTTCTGGATGGAGTTTGTaGCTTTCTGCCCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSSGWSL*LSAPGG
Trigger: TCCGCCTGGGGCAGAAAGCCACAAACTCCATCCAGA...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGCGTTCCGGATCTGGATaGAGTTTGTGGCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PQIWSDGFASYLSMTSFWRSGSG*SLWLSA
Trigger: GGCAGAAAGCCACAAACTCCATCCAGATCCGGAACG...CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGCTCTGTAGGTACACATaGGGCTTCTGTACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVLCRYT*GFCTSA
Trigger: TGCTGAGGTACAGAAGCCCCATGTGTACCTACAGAG...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCTCTGTAGGTACACATaGGGCTTCTGTACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWLCRYT*GFCTSA
Trigger: TGCTGAGGTACAGAAGCCCCATGTGTACCTACAGAG...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCATTTCTAACCTCCACCTaGCTGCTCTGTAGGTACACA +
Preference number: 4 (lower is better)
Translates to: PPIRPSLAVQDKSSLGHPFLTST*LLCRYT
Trigger: TGTGTACCTACAGAGCAGCCAGGTGGAGGTTAGAAA...TGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGCAAGGGAGGGCCAGATaGGTCAGCTCTTCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTQGRAR*VSSSWV
Trigger: TACCCAGGAAGAGCTGACCCATCTGGCCCTCCCTTG...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTTTGGTGAGAATGAGCTaGCGAGTCACACGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSLVRMS*RVTRVL
Trigger: GAGGACCCGTGTGACTCGCCAGCTCATTCTCACCAA...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGGCATGTTGGGAAGGCTaGTCTTTTTGCTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWACWEG*SFCSGC
Trigger: ACAGCCTGAGCAAAAAGACCAGCCTTCCCAACATGC...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGGCATGTTGGGAAGGCTaGTCTTTTTGCTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVACWEG*SFCSGC
Trigger: ACAGCCTGAGCAAAAAGACCAGCCTTCCCAACATGC...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGGATGTCACAGGGGCTaGAGTTATTCAGGCGAAGGG +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAGCHRG*SYSGEG
Trigger: CCCTTCGCCTGAATAACTCCAGCCCCTGTGACATCC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCGTCAGCTTCAGGTGGTaGGTGGTCACCAGCTCACTC +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVVSFRW*VVTSSL
Trigger: GAGTGAGCTGGTGACCACCCACCACCTGAAGCTGAC...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGATGTTCTCCTGTGCTTaGAGCACCAGCTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PQIWSDGFASYLSMTSFWMFSCA*STSCLS
Trigger: GGACAAGCAGCTGGTGCTCCAAGCACAGGAGAACAT...CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGCTTCCACCACCATCGTaGACTCGTACAGCTCACTAC +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVLPPPS*TRTAHY
Trigger: GTAGTGAGCTGTACGAGTCCACGATGGTGGTGGAAG...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGAGGCTGAGACCATTGTaGAAGGGGGTTCTTCCATTC +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWRLRPL*KGVLPF
Trigger: GAATGGAAGAACCCCCTTCCACAATGGTCTCAGCCT...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp AAGCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCGTCTCTGCTGTGGTGTaGCCTGTCCTTTATGTTAGC +
Preference number: 4 (lower is better)
Translates to: KQNHMGKLSTGGGGSGQIVSAVV*PVLYVS
Trigger: GCTAACATAAAGGACAGGCCACACCACAGCAGAGAC...GATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGATCTCAATGTGGTaGTCTCTGCTGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVVISMW*SLLWCG
Trigger: GCCACACCACAGCAGAGACCACCACATTGAGATCAC...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGCTGGAGGTAATTTGGTaGGTGCCTTTGCCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: WWVPLPSQLSFVFTGHTELEVIW*VPLPSQ
Trigger: TTGGCTGGGCAAAGGCACCCACCAAATTACCTCCAG...CTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGTCCATGACGTCCTTCTaGGTCAGCCTGGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTSMTSF*VSLVWR
Trigger: CCTCCAGACCAGGCTGACCCAGAAGGACGTCATGGA...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGATTATGATCGATCCCTaGGGAGGGGAACATGCACAC +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVIMIDP*GGEHAH
Trigger: GTGTGCATGTTCCCCTCCCCAGGGATCGATCATAAT...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAAGTGCTTGGGCCTGAGTaGTATGTCTCTCCAACATTT +
Preference number: 4 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQVLGPE*YVSPTF
Trigger: AAATGTTGGAGAGACATATCACTCAGGCCCAAGCAC...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CTGCTGTGGTGTGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATGAGGGCTCTGGGGAGATCAAATaGTGTTTCCGTAGCAACTCG +
Preference number: 4 (lower is better)
Translates to: LLWCGLSFMLALRTYHEGSGEIK*CFRSNS
Trigger: CGAGTTGCTACGGAAACATCATTTGATCTCCCCAGA...GCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCACACCACAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTCCTTTAGGTGCAGAGTaGAACGGCACTGTATCGGTG +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSPLGAE*NGTVSV
Trigger: CACCGATACAGTGCCGTTTCACTCTGCACCTAAAGG...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCAGGCTCAAATCGTATaGAGTGCTGGGCTGTTAAGT +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWQAQIV*SAGLLS
Trigger: ACTTAACAGCCCAGCACTTCATACGATTTGAGCCTG...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCGCAGGTTGGGCTTCATaGTCTGCCAGTAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVAGWAS*SASRRP
Trigger: TGGCCTTCTACTGGCAGATCATGAAGCCCAACCTGC...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGAGAAAAGCTCAGGATaGACTCGTGGTCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAEKSSG*TRGLCG
Trigger: CCCACACAGACCACGAGTTCATCCTGAGCTTTTCTC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGCAGGTATCTGATGGGTaGCTTGCTGTTGTTCCACAT +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVQVSDG*LAVVPH
Trigger: ATGTGGAACAACAGCAAGTCACCCATCAGATACCTG...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTTCCCCCACAGGTATCTaGTGGGTGACTTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSASPTGI*WVTCCC
Trigger: ACAACAGCAAGTCACCCATCAGATACCTGTGGGGGA...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTCAGTCAACTCCAACTTaGGCTGGCACTCCTCACTTG +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAQSTPT*AGTPHL
Trigger: CAAGTGAGGAGTGCCAGCTCAAGTTGGAGTTGACTG...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCGAAATACTCAAACTTaGGGGAGAAACGGGTCCGTA +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWRNTQT*GRNGSV
Trigger: TACGGACCCGTTTCTCCCTCAAGTTTGAGTATTTCG...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTATGCCCTGGGAAAAGTaGGGGAAGAAAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSMPWEK*GKKAAP
Trigger: AGGAGCTGCTTTCTTCCCTCACTTTTCCCAGGGCAT...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTTGTTGGCACAGCCTGTaGTGTCAATGCACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSCWHSL*CQCTAA
Trigger: AGCAGCTGTGCATTGACATCACAGGCTGTGCCAACA...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CTGCTGTGGTGTGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATGAGGGCAGTCAGTTTCATGGCTaGATTCCGATGAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLWCGLSFMLALRTYHEGSQFHG*IPMNWR
Trigger: CCTCCAGTTCATCGGAATTCAGCCATGAAACTGACT...GCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCACACCACAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGAGTCAGTTTCATGGCTaGATTCCGATGAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVSQFHG*IPMNWR
Trigger: CCTCCAGTTCATCGGAATTCAGCCATGAAACTGACT...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCAGCCGCTGCCGTCTTTaGATACCCTGGGAACTGAGT +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVSRCRL*IPWELS
Trigger: ACTCAGTTCCCAGGGTATTCAAAGACGGCAGCGGCT...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGCCCACAGATCTGGTCTaGTGGTTTTGCATCCTACTT +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVPTDLV*WFCILL
Trigger: AAGTAGGATGCAAAACCATCAGACCAGATCTGTGGG...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTGATGGTTTTGTTTCAACATTTGGGATaGTTGTGTTTGGGATTGTGT +
Preference number: 4 (lower is better)
Translates to: PKWEARVPLAHRSGLMVLFQHLG*LCLGLC
Trigger: ACACAATCCCAAACACAATCATCCCAAATGTTGAAA...CAAAACCATCAGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGGAGATGCCTTTAGGTaGAGAGTGAAACGGCACTGT +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVGDAFR*RVKRHC
Trigger: ACAGTGCCGTTTCACTCTGCACCTAAAGGCATCTCC...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGGGGCTTCCCAGAAATaGCTAGAACCAGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAGASQK*LEPVAS
Trigger: AGAAGCCACTGGTTCTAGGCATTTCTGGGAAGCCCC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTGCTGGCACTGGAGCTaGCCTCAACTGATGAGTCAG +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVCWHWS*PQLMSQ
Trigger: CTGACTCATCAGTTGAGGGCAGCTCCAGTGCCAGCA...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCAAGTCCTGCAGGCGATaGCTCTTCCCTGGAATCTCC +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVKSCRR*LFPGIS
Trigger: GGAGATTCCAGGGAAGAGGCATCGCCTGCAGGACTT...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGGAGACACTCTTCACTaGAGGCAACCTGACAAGGCT +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAGDTLH*RQPDKA
Trigger: AGCCTTGTCAGGTTGCCTCCAGTGAAGAGTGTCTCC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGGAGACACTCTTCACTaGAGGCAACCTGACAAGGCT +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSGDTLH*RQPDKA
Trigger: AGCCTTGTCAGGTTGCCTCCAGTGAAGAGTGTCTCC...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTCCGACTCTCCATTCTaGCAAGCAGAAGTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVSDSPF*QAEVCL
Trigger: TAGACAGACTTCTGCTTGCCAGAATGGAGAGTCGGA...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGTCCGACTCTCCATTCTaGCAAGCAGAAGTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWSDSPF*QAEVCL
Trigger: TAGACAGACTTCTGCTTGCCAGAATGGAGAGTCGGA...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTGCTGTGGTGTGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATGAGGGCTCTGGCTCTGTACTCTaGAATTCTCCTATCGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLWCGLSFMLALRTYHEGSGSVL*NSPIGA
Trigger: AGCACCGATAGGAGAATTCCAGAGTACAGAGCCAGA...GCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCACACCACAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTAGCCGTGGACCGAAGGTTTTCAGGCTCAAATCGTATGAAGTGCTGGGCTGTTTCTGGCTCTGTACTCTaGAATTCTCCTATCGGTGCT +
Preference number: 4 (lower is better)
Translates to: LAVDRRFSGSNRMKCWAVSGSVL*NSPIGA
Trigger: AGCACCGATAGGAGAATTCCAGAGTACAGAGCCAGA...AACAGCCCAGCACTTCATACGATTTGAGCCTGAAAACCTTCGGTCCACGGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGAACTGGACAATGTACTaGCAGGTCATTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVNWTMY*QVIPGA
Trigger: GGCTCCTGGAATGACCTGCCAGTACATTGTCCAGTT...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGACCAGCTCCTTTATCTaGCAGTTGTCGCACATGATG +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVTSSFI*QLSHMM
Trigger: CATCATGTGCGACAACTGCCAGATAAAGGAGCTGGT...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTGCTGTGGTGTGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATGAGGGCGCTGCCCAATTCCTATaGTCACCAGCTCCTTTATCT +
Preference number: 4 (lower is better)
Translates to: LLWCGLSFMLALRTYHEGAAQFL*SPAPLS
Trigger: AGATAAAGGAGCTGGTGACCATAGGAATTGGGCAGC...GCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCACACCACAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTAACTCGTGGTCTGTGTaGGGGCTTAGAACCCCCTTT +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSANSWSV*GLRTPF
Trigger: AAAGGGGGTTCTAAGCCCCCACACAGACCACGAGTT...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGAATGTAGTTCTCCCCTaGGATGATGAGGGCATATGG +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVNVVLP*DDEGIW
Trigger: CCATATGCCCTCATCATCCCAGGGGAGAACTACATT...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGGATGGAGTTTGTaGCTTTCTGCCCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVSGWSL*LSAPGG
Trigger: TCCGCCTGGGGCAGAAAGCCACAAACTCCATCCAGA...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp AAGCAATTTTCCTGCCTCAGCCTCAGCCTCCCGAGTATCTGGGATTATAGGTGTCTGACGTTCCGGATCTaGATGGAGTTTGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLSLPSIWDYRCLTFRI*MEFVAF
Trigger: GAAAGCCACAAACTCCATCCAGATCCGGAACGTCAG...ACACCTATAATCCCAGATACTCGGGAGGCTGAGGCTGAGGCAGGAAAATTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGTTTCTAACCTCCACCTaGCTGCTCTGTAGGTACACA +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWFLTST*LLCRYT
Trigger: TGTGTACCTACAGAGCAGCCAGGTGGAGGTTAGAAA...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCAACTCCAACTTGAGCTaGCACTCCTCACTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVNSNLS*HSSLGP
Trigger: GGGCCCAAGTGAGGAGTGCCAGCTCAAGTTGGAGTT...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTGTCCTTTATGAAACGGGTCCGTATTaGGGAGCGATTGGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: LSSDLNVVVSAVVWPVLYETGPY*GAIGEN
Trigger: ATTCTCACCAATCGCTCCCCAATACGGACCCGTTTC...ATAAAGGACAGGCCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGAAACGGGTCCGTATTaGGGAGCGATTGGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVETGPY*GAIGEN
Trigger: ATTCTCACCAATCGCTCCCCAATACGGACCCGTTTC...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGGGCAGGAGGCATGTTaGGAAGGCTGGTCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTGQEAC*EGWSFC
Trigger: GCAAAAAGACCAGCCTTCCCAACATGCCTCCTGCCC...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGCAGCTCCTTTCCCGTaGGATAGCATGCTCTCCATA +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAAAPFP*DSMLSI
Trigger: TATGGAGAGCATGCTATCCCACGGGAAAGGAGCTGC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAGTCTTCCTTGTCTTCTaGAACATAGGTCTCCCAATC +
Preference number: 4 (lower is better)
Translates to: PPIRPSLAVQDKSSLGHPVFLVF*NIGLPI
Trigger: GATTGGGAGACCTATGTTCCAGAAGACAAGGAAGAC...TGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGTTGGTCAGCTTCAGGTaGTGGGTGGTCACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTLVSFR*WVVTSS
Trigger: TGAGCTGGTGACCACCCACCACCTGAAGCTGACCAA...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTTGGTCAGCTTCAGGTaGTGGGTGGTCACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVLVSFR*WVVTSS
Trigger: TGAGCTGGTGACCACCCACCACCTGAAGCTGACCAA...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGAAGCCGGAAGTAGTGTaGGATCTCTGTAGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVKPEVV*DLCSVG
Trigger: ACCAACACTACAGAGATCCCACACTACTTCCGGCTT...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGGTAGTGATCTCAATGTaGTGGTCTCTGCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVVVISM*WSLLWC
Trigger: ACACCACAGCAGAGACCACCACATTGAGATCACTAC...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGAAAACTCAGCACTGGTaGTGGTGGCAGTGGACAGAT +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVKTQHW*WWQWTD
Trigger: ATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTT...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGGGAAAACTCAGCACTaGTGGTGGTGGCAGTGGACA +
Preference number: 4 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTGKTQH*WWWQWT
Trigger: TGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCC...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTGTCCTTTATGCTTGCCCACAGATCTaGTCTGATGGTTTTGCATCC +
Preference number: 4 (lower is better)
Translates to: LSSDLNVVVSAVVWPVLYACPQI*SDGFAS
Trigger: GGATGCAAAACCATCAGACCAGATCTGTGGGCAAGC...ATAAAGGACAGGCCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
3UTR CAA 72 bp GGTCAGCCTGGTCTGGAGGTAATTTGGTGGGTGCCTTaGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCAT +
Preference number: 4 (lower is better)
Translates to: GQPGLEVIWWVP*PSQLSFVFTGH
Trigger: ATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAATTACCTCCAGACCAGGCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGGTTGACTTGCTTTCTTaGGAGGTTCTCTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWVDLLS*EVLWSF
Trigger: AAAGGACCAGAGAACCTCTCAAGAAAGCAAGTCAAC...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGGTTGACTTGCTTTCTTaGGAGGTTCTCTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVVDLLS*EVLWSF
Trigger: AAAGGACCAGAGAACCTCTCAAGAAAGCAAGTCAAC...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGCTGGAAAGGTTCTACTaGGCCTTTCACCTCGATTTC +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVLERFY*AFHLDF
Trigger: GAAATCGAGGTGAAAGGCTCAGTAGAACCTTTCCAG...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTGTCCTTTATCAGGTATCTGATGGGTaGCTTGCTGTTGTTCCACAT +
Preference number: 4 (lower is better)
Translates to: LSSDLNVVVSAVVWPVLYQVSDG*LAVVPH
Trigger: ATGTGGAACAACAGCAAGTCACCCATCAGATACCTG...ATAAAGGACAGGCCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGGAGATGCCTTTAGGTaGAGAGTGAAACGGCACTGT +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSGDAFR*RVKRHC
Trigger: ACAGTGCCGTTTCACTCTGCACCTAAAGGCATCTCC...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGTCGTGGTGGTGTTCTaGAGCGCAATTACCATCTCA +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSVVVVF*SAITIS
Trigger: TGAGATGGTAATTGCGCTGCAGAACACCACCACGAC...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTCACCATGCAGAATTCTaGTTGGTGTCCGAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSHHAEF*LVSEEL
Trigger: AAGCTCCTCGGACACCAAGCAGAATTCTGCATGGTG...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCCCAGTGGCTTCTTCATaGCTGACACGTGACAAGGGA +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVPVASS*LTRDKG
Trigger: TCCCTTGTCACGTGTCAGGCATGAAGAAGCCACTGG...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTTGGCCAGGTGCTCTTaGATCCGCACTGTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVLARCS*IRTVFS
Trigger: GCTAAAGACAGTGCGGATGCAAGAGCACCTGGCCAA...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGTCCATAAAATCCAGCTaGTCTCGCTTGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTSIKSS*SRLARC
Trigger: GCACCTGGCCAAGCGAGAGCAGCTGGATTTTATGGA...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGACTGGAATTCCATACTaGCGCCGTAGTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTTGIPY*RRSPAP
Trigger: TGGAGCTGGACTACGGCGGCAGTATGGAATTCCAGT...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGTCCTGTACTCCAGCCTaGCTCATGACCCGCTCATTT +
Preference number: 4 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTSCTPA*LMTRSF
Trigger: AAATGAGCGGGTCATGAGCCAGGCTGGAGTACAGGA...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCCTGTACTCCAGCCTaGCTCATGACCCGCTCATTT +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVSCTPA*LMTRSF
Trigger: AAATGAGCGGGTCATGAGCCAGGCTGGAGTACAGGA...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGTTCAGCTCTTTCTTCTaGACGGAACGCTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: WWVPLPSQLSFVFTGHTEFSSFF*TERFSQ
Trigger: CTGTGAGAAGCGTTCCGTCCAGAAGAAAGAGCTGAA...CTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGTTCTCCTATCGGTGCTaGCTTCTTTGGAGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWFSYRC*LLWRKN
Trigger: GTTTTTCCTCCAAAGAAGCCAGCACCGATAGGAGAA...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGTCTGGCTCTGTACTCTaGAATTCTCCTATCGGTGCT +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVSGSVL*NSPIGA
Trigger: AGCACCGATAGGAGAATTCCAGAGTACAGAGCCAGA...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTGCTGTGGTGTGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATGAGGGCAGCACAACTCTGTTCTaGCTCTGTACTCTGGAATTC +
Preference number: 4 (lower is better)
Translates to: LLWCGLSFMLALRTYHEGSTTLF*LCTLEF
Trigger: GAATTCCAGAGTACAGAGCCAGAACAGAGTTGTGCT...GCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCACACCACAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGACCAGCTCCTTTATCTaGCAGTTGTCGCACATGATG +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVTSSFI*QLSHMM
Trigger: CATCATGTGCGACAACTGCCAGATAAAGGAGCTGGT...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGAATCGTATGAAGTGCTaGGCTGTTAAGTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWNRMKC*AVKSVS
Trigger: GCTCACAGACTTAACAGCCCAGCACTTCATACGATT...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCATGTTCTCCTGTGCTTaGAGCACCAGCTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVMFSCA*STSCLS
Trigger: GGACAAGCAGCTGGTGCTCCAAGCACAGGAGAACAT...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTCTCTGCTGTGGTGTaGCCTGTCCTTTATGTTAGC +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAVSAVV*PVLYVS
Trigger: GCTAACATAAAGGACAGGCCACACCACAGCAGAGAC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCGTGATCTCAATGTGGTaGTCTCTGCTGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVVISMW*SLLWCG
Trigger: GCCACACCACAGCAGAGACCACCACATTGAGATCAC...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTAGTGATCTCAATGTaGTGGTCTCTGCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVVVISM*WSLLWC
Trigger: ACACCACAGCAGAGACCACCACATTGAGATCACTAC...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGCTTGGGCCTGAGTaGTATGTCTCTCCAACATTT +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAVLGPE*YVSPTF
Trigger: AAATGTTGGAGAGACATATCACTCAGGCCCAAGCAC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTTCTGGGGAGATCAAATaGTGTTTCCGTAGCAACTCG +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSSGEIK*CFRSNS
Trigger: CGAGTTGCTACGGAAACATCATTTGATCTCCCCAGA...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTCTGGAAAGGTTCTACTaGGCCTTTCACCTCGATTTC +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSLERFY*AFHLDF
Trigger: GAAATCGAGGTGAAAGGCTCAGTAGAACCTTTCCAG...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCAGCTCTTCCTGGGTATaGGCAGTCAACTCCAACTTG +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVSSSWV*AVNSNL
Trigger: CAAGTTGGAGTTGACTGCTCATACCCAGGAAGAGCT...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTCGAAATACTCAAACTTaGGGGAGAAACGGGTCCGTA +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSARNTQT*GRNGSV
Trigger: TACGGACCCGTTTCTCCCTCAAGTTTGAGTATTTCG...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGAATTCTCCTATCGGTaGTGGCTTCTTTGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVEFSYR*WLLWRK
Trigger: TTTCCTCCAAAGAAGCCAGCACCGATAGGAGAATTC...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAATCAAATCGTATGAAGTaGTGGGCTGTTAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQSNRMK*WAVKSV
Trigger: CACAGACTTAACAGCCCAGCACTTCATACGATTTGA...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp AAGCAATTTTCCTGCCTCAGCCTCAGCCTCCCGAGTATCTGGGATTATAGGTGTTTTCTAATAATCAGCTaGTTCCTAGCCGTGGACCGA +
Preference number: 4 (lower is better)
Translates to: KQFSCLSLSLPSIWDYRCFLIIS*FLAVDR
Trigger: TCGGTCCACGGCTAGGAAGCAGCTGATTATTAGAAA...ACACCTATAATCCCAGATACTCGGGAGGCTGAGGCTGAGGCAGGAAAATTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGCACCATGCAGAATTCTaGTTGGTGTCCGAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTHHAEF*LVSEEL
Trigger: AAGCTCCTCGGACACCAAGCAGAATTCTGCATGGTG...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCGGGAGACTGTCACCATaGAGAATTCTGCTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVGRLSP*RILLGV
Trigger: GACACCAAGCAGAATTCTGCATGGTGACAGTCTCCC...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp GAGCACACTGTGAAAATCCCTCAGGTAGCATTTCTAATAATCAGCTGCTTCCTAAACAAAGCCGACGGTTaGAATGGCCCAGTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: EHTVKIPQVAFLIISCFLNKADG*NGPVPE
Trigger: CTCTGGGACTGGGCCATTGCAACCGTCGGCTTTGTT...TAGGAAGCAGCTGATTATTAGAAATGCTACCTGAGGGATTTTCACAGTGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTTTCAGCTCTTTCTTCTaGACGGAACGCTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSFSSFF*TERFSQ
Trigger: CTGTGAGAAGCGTTCCGTCCAGAAGAAAGAGCTGAA...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGAGTGTGTGGGCTGACTaGGTCTCCACTAAAATAAAA +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWSVWAD*VSTKIK
Trigger: TTTTATTTTAGTGGAGACCCAGTCAGCCCACACACT...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGCTGCCCAATTCCTATaGTCACCAGCTCCTTTATCT +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAAAQFL*SPAPLS
Trigger: AGATAAAGGAGCTGGTGACCATAGGAATTGGGCAGC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTAATGTAGTTCTCCCCTaGGATGATGAGGGCATATGG +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSANVVLP*DDEGIW
Trigger: CCATATGCCCTCATCATCCCAGGGGAGAACTACATT...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCCTGACGTTCCGGATCTaGATGGAGTTTGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVLTFRI*MEFVAF
Trigger: GAAAGCCACAAACTCCATCCAGATCCGGAACGTCAG...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTGCTGTGGTGTGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATGAGGGCGATGAGTCAGTTTCATaGCTGAATTCCGATGAACTG +
Preference number: 4 (lower is better)
Translates to: LLWCGLSFMLALRTYHEGDESVS*LNSDEL
Trigger: CAGTTCATCGGAATTCAGCCATGAAACTGACTCATC...GCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCACACCACAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGGATGAGTCAGTTTCATaGCTGAATTCCGATGAACTG +
Preference number: 4 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVDESVS*LNSDEL
Trigger: CAGTTCATCGGAATTCAGCCATGAAACTGACTCATC...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCATGAGGTCACTGGCCTaGCACTGGAATTCCATACTG +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVMRSLA*HWNSIL
Trigger: CAGTATGGAATTCCAGTGCCAGGCCAGTGACCTCAT...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTAAGCCGGAAGTAGTGTaGGATCTCTGTAGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAKPEVV*DLCSVG
Trigger: ACCAACACTACAGAGATCCCACACTACTTCCGGCTT...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCTAATTTTGCCATACTaGTCTTCGCTATGCACTGAG +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWLILPY*SSLCTE
Trigger: CTCAGTGCATAGCGAAGACCAGTATGGCAAAATTAG...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGGCAAGGCAAATCCATaGATGAGAAGTGCAATGGGC +
Preference number: 4 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTGKANP*MRSAMG
Trigger: GCCCATTGCACTTCTCATCCATGGATTTGCCTTGCC...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGCAGGCTCAAATCGTATaGAGTGCTGGGCTGTTAAGT +
Preference number: 4 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTQAQIV*SAGLLS
Trigger: ACTTAACAGCCCAGCACTTCATACGATTTGAGCCTG...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGTCTTCGCTATGCACTaGGTAGTGATCTCAATGTGG +
Preference number: 4 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTVFAMH*VVISMW
Trigger: CCACATTGAGATCACTACTCAGTGCATAGCGAAGAC...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCGTCTTCGCTATGCACTaGGTAGTGATCTCAATGTGG +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVVFAMH*VVISMW
Trigger: CCACATTGAGATCACTACTCAGTGCATAGCGAAGAC...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGATTCCTTGGTTGACTTaGTTTCTTGAGAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWIPWLT*FLERFS
Trigger: AGAGAACCTCTCAAGAAAGCAAGTCAACCAAGGAAT...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCCAAAGCAATCAGCTaGCCAATTCCTATGGTCACC +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVSKAIS*PIPMVT
Trigger: GGTGACCATAGGAATTGGGCAGCTGATTGCTTTGGA...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTTTTCTAATAATCAGCTaGTTCCTAGCCGTGGACCGA +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSFLIIS*FLAVDR
Trigger: TCGGTCCACGGCTAGGAAGCAGCTGATTATTAGAAA...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTAAGGCCAGCTCCACGTaGGTAGCATTTCTAATAATC +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSKASST*VAFLII
Trigger: GATTATTAGAAATGCTACGCACGTGGAGCTGGCCTT...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp AAGCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCTCCATGGATGAGAAGTaGAATGGGCATAGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: KQNHMGKLSTGGGGSGQISMDEK*NGHSKS
Trigger: ACTTTTACTATGCCCATTGCACTTCTCATCCATGGA...GATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCAGGCTGTCCACAGTGTaGTCTAACTCATCTTCGAAC +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVRLSTV*SNSSSN
Trigger: GTTCGAAGATGAGTTAGACCACACTGTGGACAGCCT...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTCGGTGCTGGCTTCTTTaGAGGAAAAACAAGAGACTT +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSARCWLL*RKNKRL
Trigger: AAGTCTCTTGTTTTTCCTCCAAAGAAGCCAGCACCG...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTTTCTCCTATCGGTGCTaGCTTCTTTGGAGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSFSYRC*LLWRKN
Trigger: GTTTTTCCTCCAAAGAAGCCAGCACCGATAGGAGAA...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGTCTTCCTTGTCTTCTaGAACATAGGTCTCCCAATC +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSVFLVF*NIGLPI
Trigger: GATTGGGAGACCTATGTTCCAGAAGACAAGGAAGAC...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGCTAATTTTGCCATACTaGTCTTCGCTATGCACTGAG +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVLILPY*SSLCTE
Trigger: CTCAGTGCATAGCGAAGACCAGTATGGCAAAATTAG...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CTGCTGTGGTGTGGCCTGTCCTTTATGTTAGCTCTGAGGACATATCATGAGGGCTTGAGCCACCACACCTaGCCTAAAAATGTAAATATC +
Preference number: 4 (lower is better)
Translates to: LLWCGLSFMLALRTYHEGLSHHT*PKNVNI
Trigger: GATATTTACATTTTTAGGCCAGGTGTGGTGGCTCAA...GCCCTCATGATATGTCCTCAGAGCTAACATAAAGGACAGGCCACACCACAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR GCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCGAATTCTCCTATCGGTaGTGGCTTCTTTGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVEFSYR*WLLWRK
Trigger: TTTCCTCCAAAGAAGCCAGCACCGATAGGAGAATTC...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp AGGTTTTCAGGCTCAAATCGTATGAAGTGCTGGGCTGTTAAGTCTGTGAGCTCTTTTCTAATAATCAGCTaGTTCCTAGCCGTGGACCGA +
Preference number: 4 (lower is better)
Translates to: RFSGSNRMKCWAVKSVSSFLIIS*FLAVDR
Trigger: TCGGTCCACGGCTAGGAAGCAGCTGATTATTAGAAA...AGAGCTCACAGACTTAACAGCCCAGCACTTCATACGATTTGAGCCTGAAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS-3UTR GCA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGAAGGCCAGCTCCACGTaGGTAGCATTTCTAATAATC +
Preference number: 4 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTKASST*VAFLII
Trigger: GATTATTAGAAATGCTACGCACGTGGAGCTGGCCTT...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp TGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGTGTGGCACACGTAAGTaGTTCATCCAGTTTTTATTC +
Preference number: 4 (lower is better)
Translates to: WWVPLPSQLSFVFTGHTECGTRK*FIQFLF
Trigger: GAATAAAAACTGGATGAACCACTTACGTGTGCCACA...CTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGTGTGGCACACGTAAGTaGTTCATCCAGTTTTTATTC +
Preference number: 4 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVCGTRK*FIQFLF
Trigger: GAATAAAAACTGGATGAACCACTTACGTGTGCCACA...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGCGGTGCTGGCTTCTTTaGAGGAAAAACAAGAGACTT +
Preference number: 4 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTRCWLL*RKNKRL
Trigger: AAGTCTCTTGTTTTTCCTCCAAAGAAGCCAGCACCG...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCAGCACAACTCTGTTCTaGCTCTGTACTCTGGAATTC +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVSTTLF*LCTLEF
Trigger: GAATTCCAGAGTACAGAGCCAGAACAGAGTTGTGCT...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTAGTGTGTGGGCTGACTaGGTCTCCACTAAAATAAAA +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSASVWAD*VSTKIK
Trigger: TTTTATTTTAGTGGAGACCCAGTCAGCCCACACACT...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR TCA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTAAGCTTCTTCCTGCATaGATCTTCAAGCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAKLLPA*IFKLLV
Trigger: AACAAGAAGCTTGAAGATTCATGCAGGAAGAAGCTT...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCAAATCGTATGAAGTaGTGGGCTGTTAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVSNRMK*WAVKSV
Trigger: CACAGACTTAACAGCCCAGCACTTCATACGATTTGA...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp GTGAAAATCCCTCAGGTAGCATTTCTAATAATCAGCTGCTTCCTAGCCGTGGACTCAAATCGTATGAAGTaGTGGGCTGTTAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VKIPQVAFLIISCFLAVDSNRMK*WAVKSV
Trigger: CACAGACTTAACAGCCCAGCACTTCATACGATTTGA...GTCCACGGCTAGGAAGCAGCTGATTATTAGAAATGCTACCTGAGGGATTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS-3UTR CCA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTTGGGATGATTGTGTTTaGGATTGTGTCTTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSWDDCV*DCVFWD
Trigger: ATCCCAAAAGACACAATCCCAAACACAATCATCCCA...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR TCA 90 bp ATAGATCAGATCCAAAGCAATCAGCTGCCCAATTCCTCCACTAATATAGCATGTCAGGCTCAAATCGTATaGAGTGCTGGGCTGTTAAGT +
Preference number: 4 (lower is better)
Translates to: IDQIQSNQLPNSSTNIACQAQIV*SAGLLS
Trigger: ACTTAACAGCCCAGCACTTCATACGATTTGAGCCTG...ACATGCTATATTAGTGGAGGAATTGGGCAGCTGATTGCTTTGGATCTGATCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS-3UTR CCA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCGGTGTAGTAATCTTCTaGGGAGATCAAATGATGTTT +
Preference number: 4 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVGVVIF*GDQMMF
Trigger: AAACATCATTTGATCTCCCCAGAAGATTACTACACC...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR GCA 90 bp ATAGATCAGATCCAAAGCAATCAGCTGCCCAATTCCTCCACTAATATAGCATGTTCCAAAGCAATCAGCTaGCCAATTCCTCCACTAATA +
Preference number: 4 (lower is better)
Translates to: IDQIQSNQLPNSSTNIACSKAIS*PIPPLI
Trigger: TATTAGTGGAGGAATTGGGCAGCTGATTGCTTTGGA...ACATGCTATATTAGTGGAGGAATTGGGCAGCTGATTGCTTTGGATCTGATCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS-3UTR CCA 90 bp AGAAATATAGATCAGATCCAAAGCAATCAGCTGCCCAATTCCTCCACTAATATAAGCACAACTCTGTTCTaGCTCTGTACTCTGGAATTC +
Preference number: 4 (lower is better)
Translates to: RNIDQIQSNQLPNSSTNISTTLF*LCTLEF
Trigger: GAATTCCAGAGTACAGAGCCAGAACAGAGTTGTGCT...TATATTAGTGGAGGAATTGGGCAGCTGATTGCTTTGGATCTGATCTATATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS TCA 90 bp GACGAAGCAGCTGAGGCTCGGGACGCTGCGCCAGCGCAAGCTGCGTaGGGCGGCGGGGCCGGGCTGCGAAGCTGTAGTGGAAGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: DEAAEARDAAPAQAA*GGGAGLRSCSGRPQ
Trigger: CTGAGGCCTTCCACTACAGCTTCGCAGCCCGGCCCCGCCGCCTCACGCAGCTTGCGCTGGCGCAGCGTCCCGAGCCTCAGCTGCTTCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS TCA 90 bp GAGATATCTTGGGTGCGCAGCGAGGAGGGGCGCAGACGAAGCAGCTaGGGCTCGGGACGCTGCGCCAGCGCAAGCTGCGTGAGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: EISWVRSEEGRRRSS*GSGRCASASCVRRR
Trigger: CCGCCGCCTCACGCAGCTTGCGCTGGCGCAGCGTCCCGAGCCTCAGCTGCTTCGTCTGCGCCCCTCCTCGCTGCGCACCCAAGATATCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CCA 90 bp CTTAGCCTGCCCAGCAATAGGCATTGTTGGGGCAAGCCGGGCGCCTaGGGCCTTCTGGCTGCCCCCACTCTGCTCATCCAGCCTCGGGCC +
Preference number: 5 (lower is better)
Translates to: LSLPSNRHCWGKPGA*GLLAAPTLLIQPRA
Trigger: GGCCCGAGGCTGGATGAGCAGAGTGGGGGCAGCCAGAAGGCCCCAGGCGCCCGGCTTGCCCCAACAATGCCTATTGCTGGGCAGGCTAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478428.1
CDS CCA 90 bp GGGAGGAATACAAGGAGGACTTCCAGGTGGGCTGGCTGGGGCTGCTaGACCCGGCTGGTGGCGAAGTTGGCGCCCACATTGTCCCCTGGC +
Preference number: 5 (lower is better)
Translates to: GRNTRRTSRWAGWGC*TRLVAKLAPTLSPG
Trigger: GCCAGGGGACAATGTGGGCGCCAACTTCGCCACCAGCCGGGTCCAGCAGCCCCAGCCAGCCCACCTGGAAGTCCTCCTTGTATTCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CCA 90 bp CAAACCGTCCCTGGCCAGCGGCATGCTGGCATGGCTCCCAGTTGCTaGGCCTCATGTGGGCAAGCCCAGGGTACCTACAGCCCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: QTVPGQRHAGMAPSC*ASCGQAQGTYSPVP
Trigger: GGGGACAGGGCTGTAGGTACCCTGGGCTTGCCCACATGAGGCCCAGCAACTGGGAGCCATGCCAGCATGCCGCTGGCCAGGGACGGTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS GCA 90 bp GAGGTGGTCCTCAGGGAGCTGATGGGGCAGCCCACCGCTGCCATGTaGACTGGGATGACTTCCGGCAGCAGGTCTCCCACCGTGCAGATG +
Preference number: 5 (lower is better)
Translates to: EVVLRELMGQPTAAM*TGMTSGSRSPTVQM
Trigger: CATCTGCACGGTGGGAGACCTGCTGCCGGAAGTCATCCCAGTGCACATGGCAGCGGTGGGCTGCCCCATCAGCTCCCTGAGGACCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 90 bp AGCACCAGCTGCTTGTCCGCTGAGGCTGTCTCCTCCTCACACTCCTaGTTCTGGCCAGGGCCAGGAGCTCTGTGGTCCTGGCTCGCCCCA +
Preference number: 5 (lower is better)
Translates to: STSCLSAEAVSSSHS*FWPGPGALWSWLAP
Trigger: TGGGGCGAGCCAGGACCACAGAGCTCCTGGCCCTGGCCAGAAGCAGGAGTGTGAGGAGGAGACAGCCTCAGCGGACAAGCAGCTGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000478428.1
CDS GCA 90 bp TCGAATTCCCTTCTAGCCTACCGTGGCCCACAGGGCTTCCCTCCATaGTGGGGCCAGCGCTGTGCTAACCTGGCCCTCGGGTCCCTGCAC +
Preference number: 5 (lower is better)
Translates to: SNSLLAYRGPQGFPP*WGQRCANLALGSLH
Trigger: GTGCAGGGACCCGAGGGCCAGGTTAGCACAGCGCTGGCCCCAGCATGGAGGGAAGCCCTGTGGGCCACGGTAGGCTAGAAGGGAATTCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440294.6
CDS GCA 90 bp GCACAAACCGTCCCTGGCCAGCGGCATGCTGGCATGGCTCCCAGTTaGTGGGCCTCATGTGGGCAAGCCCAGGGTACCTACAGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: AQTVPGQRHAGMAPS*WASCGQAQGTYSPV
Trigger: GACAGGGCTGTAGGTACCCTGGGCTTGCCCACATGAGGCCCAGCAACTGGGAGCCATGCCAGCATGCCGCTGGCCAGGGACGGTTTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS CCA 90 bp AATTCCCTTCTAGCCTACCGTGGCCCACAGGGCTTCCCTCCATGCTaGGGCCAGCGCTGTGCTAACCTGGCCCTCGGGTCCCTGCACCTC +
Preference number: 5 (lower is better)
Translates to: NSLLAYRGPQGFPPC*GQRCANLALGSLHL
Trigger: GAGGTGCAGGGACCCGAGGGCCAGGTTAGCACAGCGCTGGCCCCAGCATGGAGGGAAGCCCTGTGGGCCACGGTAGGCTAGAAGGGAATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440294.6
CDS TCA 90 bp GCTCCAGGACGGTCTCCAGATGCTGGCAGTGCAGGGCCTCCAAGGTaGTGTCCACCCTGCACTCCCCCAGAGAGTGAAGCTGGCCACTCG +
Preference number: 5 (lower is better)
Translates to: APGRSPDAGSAGPPR*CPPCTPPESEAGHS
Trigger: CGAGTGGCCAGCTTCACTCTCTGGGGGAGTGCAGGGTGGACATCACCTTGGAGGCCCTGCACTGCCAGCATCTGGAGACCGTCCTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS TCA 90 bp GGTGAGAATGAGCTGGCGAGTCACACGGGTCCTCAGTGGCACCGCTaGGCCAAAGTCCAGGCGGAGCTCCTTTGGGTGGCCTGGCCACTG +
Preference number: 5 (lower is better)
Translates to: GENELASHTGPQWHR*AKVQAELLWVAWPL
Trigger: CAGTGGCCAGGCCACCCAAAGGAGCTCCGCCTGGACTTTGGCTCAGCGGTGCCACTGAGGACCCGTGTGACTCGCCAGCTCATTCTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000477260.1
CDS GCA 90 bp AGTGTAGGAGGTGGTCCTCAGGGAGCTGATGGGGCAGCCCACCGCTaGCATGTGCACTGGGATGACTTCCGGCAGCAGGTCTCCCACCGT +
Preference number: 5 (lower is better)
Translates to: SVGGGPQGADGAAHR*HVHWDDFRQQVSHR
Trigger: ACGGTGGGAGACCTGCTGCCGGAAGTCATCCCAGTGCACATGGCAGCGGTGGGCTGCCCCATCAGCTCCCTGAGGACCACCTCCTACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CCA 90 bp CTGCTGGACCCGGCTGGTGGCGAAGTTGGCGCCCACATTGTCCCCTaGCACTCGTTGGTCCGGGACGCTAAAGACCTCCGCGTTTTGGAG +
Preference number: 5 (lower is better)
Translates to: LLDPAGGEVGAHIVP*HSLVRDAKDLRVLE
Trigger: CTCCAAAACGCGGAGGTCTTTAGCGTCCCGGACCAACGAGTGCCAGGGGACAATGTGGGCGCCAACTTCGCCACCAGCCGGGTCCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CCA 90 bp GGTCCTCAGGGAGCTGATGGGGCAGCCCACCGCTGCCATGTGCACTaGGATGACTTCCGGCAGCAGGTCTCCCACCGTGCAGATGAGGTT +
Preference number: 5 (lower is better)
Translates to: GPQGADGAAHRCHVH*DDFRQQVSHRADEV
Trigger: AACCTCATCTGCACGGTGGGAGACCTGCTGCCGGAAGTCATCCCAGTGCACATGGCAGCGGTGGGCTGCCCCATCAGCTCCCTGAGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CCA 90 bp CGGCTGGTGGCGAAGTTGGCGCCCACATTGTCCCCTGGCACTCGTTaGTCCGGGACGCTAAAGACCTCCGCGTTTTGGAGCTCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: RLVAKLAPTLSPGTR*SGTLKTSAFWSSWS
Trigger: AGACCAGGAGCTCCAAAACGCGGAGGTCTTTAGCGTCCCGGACCAACGAGTGCCAGGGGACAATGTGGGCGCCAACTTCGCCACCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CCA 90 bp CAGGCACCATTTTCCACCTCCAGCTCCAGGACGGTCTCCAGATGCTaGCAGTGCAGGGCCTCCAAGGTGATGTCCACCCTGCACTCCCCC +
Preference number: 5 (lower is better)
Translates to: QAPFSTSSSRTVSRC*QCRASKVMSTLHSP
Trigger: GGGGGAGTGCAGGGTGGACATCACCTTGGAGGCCCTGCACTGCCAGCATCTGGAGACCGTCCTGGAGCTGGAGGTGGAAAATGGTGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CCA 90 bp AAAGCCGACGGTTGCAATGGCCCAGTCCCAGAGCGAAGTATGGCGTaGAAGGCGGGAGGACTCGCAGGTAGCGGCTGGTCGTGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: KADGCNGPVPERSMA*KAGGLAGSGWSWWC
Trigger: ACACCACCACGACCAGCCGCTACCTGCGAGTCCTCCCGCCTTCCACGCCATACTTCGCTCTGGGACTGGGCCATTGCAACCGTCGGCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS CCA 90 bp CACAGTCCAACACCGGTGACACCAGTCCCAGAGCGAAGTATGGCGTaGAAGGCGGGAGGACTCGCAGGTAGCGGCTGGTCGTGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: HSPTPVTPVPERSMA*KAGGLAGSGWSWWC
Trigger: ACACCACCACGACCAGCCGCTACCTGCGAGTCCTCCCGCCTTCCACGCCATACTTCGCTCTGGGACTGGTGTCACCGGTGTTGGACTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469151.1
CDS-3UTR CAA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTGTCCCCTGGCACTCGTaGGTCCGGGACGCTAAAGAC +
Preference number: 5 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSVPWHS*VRDAKD
Trigger: GTCTTTAGCGTCCCGGACCAACGAGTGCCAGGGGAC...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS TCA 90 bp GTACAGGTGGCCGGAGGGCACCCCCTCATGTGCCTGCAGGATGACTaGGATGAGCTTCTGTGCCACCCTATTGCTGGCACTGGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: VQVAGGHPLMCLQDD*DELLCHPIAGTGAA
Trigger: GGCAGCTCCAGTGCCAGCAATAGGGTGGCACAGAAGCTCATCTCAGTCATCCTGCAGGCACATGAGGGGGTGCCCTCCGGCCACCTGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 90 bp CCATTTTCCACCTCCAGCTCCAGGACGGTCTCCAGATGCTGGCAGTaGAGGGCCTCCAAGGTGATGTCCACCCTGCACTCCCCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: PFSTSSSRTVSRCWQ*RASKVMSTLHSPRE
Trigger: CTCTCTGGGGGAGTGCAGGGTGGACATCACCTTGGAGGCCCTGCACTGCCAGCATCTGGAGACCGTCCTGGAGCTGGAGGTGGAAAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 90 bp CTCCAGGCACCATTTTCCACCTCCAGCTCCAGGACGGTCTCCAGATaGTGGCAGTGCAGGGCCTCCAAGGTGATGTCCACCCTGCACTCC +
Preference number: 5 (lower is better)
Translates to: LQAPFSTSSSRTVSR*WQCRASKVMSTLHS
Trigger: GGAGTGCAGGGTGGACATCACCTTGGAGGCCCTGCACTGCCAGCATCTGGAGACCGTCCTGGAGCTGGAGGTGGAAAATGGTGCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 90 bp ACTGGAATTCCATACTGCCGCCGTAGTCCAGCTCCACACTTAGCCTaGCCAGCAATAGGCATTGTTGGGGCAAGCCGGGCGCCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: TGIPYCRRSPAPHLA*PAIGIVGASRAPGA
Trigger: GGCCCCAGGCGCCCGGCTTGCCCCAACAATGCCTATTGCTGGGCAGGCTAAGTGTGGAGCTGGACTACGGCGGCAGTATGGAATTCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478428.1
CDS CCA 90 bp CACCTTTTCCTGGGAACATCCCCAGTCCCAGAGCGAAGTATGGCGTaGAAGGCGGGAGGACTCGCAGGTAGCGGCTGGTCGTGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: HLFLGTSPVPERSMA*KAGGLAGSGWSWWC
Trigger: ACACCACCACGACCAGCCGCTACCTGCGAGTCCTCCCGCCTTCCACGCCATACTTCGCTCTGGGACTGGGGATGTTCCCAGGAAAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS TCA 90 bp TGGTCACCAGCTCACTCAGCACCCCAGAGCAGGGCTGCTCGGGAATaGGGTCACTGGCCTGGCACTGGAATTCCATACTGCCGCCGTAGT +
Preference number: 5 (lower is better)
Translates to: WSPAHSAPQSRAARE*GHWPGTGIPYCRRS
Trigger: ACTACGGCGGCAGTATGGAATTCCAGTGCCAGGCCAGTGACCTCATTCCCGAGCAGCCCTGCTCTGGGGTGCTGAGTGAGCTGGTGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000478428.1
CDS GCA 90 bp ATGACCTCGGCTGAGTACAAGTTGCGGAAGACGCCGGTGAGCAAGTaGGAGATATCTTGGGTGCGCAGCGAGGAGGGGCGCAGACGAAGC +
Preference number: 5 (lower is better)
Translates to: MTSAEYKLRKTPVSK*EISWVRSEEGRRRS
Trigger: GCTTCGTCTGCGCCCCTCCTCGCTGCGCACCCAAGATATCTCGCACTTGCTCACCGGCGTCTTCCGCAACTTGTACTCAGCCGAGGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS GCA 90 bp ACACACCACCCTTGGCCCTGCCCAGGGAGCCATCTTGGGTGGGCATaGAGAAGCTGCCCAGACACCAGGCTTCATCCTCAGACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: THHPWPCPGSHLGWA*RSCPDTRLHPQTPV
Trigger: AACAGGAGTCTGAGGATGAAGCCTGGTGTCTGGGCAGCTTCTGCATGCCCACCCAAGATGGCTCCCTGGGCAGGGCCAAGGGTGGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS CCA 90 bp TGGAGGGAGACTGGGCTCTCCTTCATGCGCCATGTGGCTGGGAGCTaGCTGACGTTCCGGATCTGGATGGAGTTTGTGGCTTTCTGCCCC +
Preference number: 5 (lower is better)
Translates to: WRETGLSFMRHVAGS*LTFRIWMEFVAFCP
Trigger: GGGGCAGAAAGCCACAAACTCCATCCAGATCCGGAACGTCAGCCAGCTCCCAGCCACATGGCGCATGAAGGAGAGCCCAGTCTCCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CCA 90 bp CTCAGTGGCACCGCTGAGCCAAAGTCCAGGCGGAGCTCCTTTGGGTaGCCTGGCCACTGCTCTGTGCTGCAATCAGAGCTCTCCTTAGAG +
Preference number: 5 (lower is better)
Translates to: LSGTAEPKSRRSSFG*PGHCSVLQSELSLE
Trigger: CTCTAAGGAGAGCTCTGATTGCAGCACAGAGCAGTGGCCAGGCCACCCAAAGGAGCTCCGCCTGGACTTTGGCTCAGCGGTGCCACTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CCA 90 bp ACCCATGATGCTGAGAGAGGCCTCAAACTCTGCACAAACCGTCCCTaGCCAGCGGCATGCTGGCATGGCTCCCAGTTGCTGGGCCTCATG +
Preference number: 5 (lower is better)
Translates to: THDAERGLKLCTNRP*PAACWHGSQLLGLM
Trigger: CATGAGGCCCAGCAACTGGGAGCCATGCCAGCATGCCGCTGGCCAGGGACGGTTTGTGCAGAGTTTGAGGCCTCTCTCAGCATCATGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS CCA 90 bp CTCAGTGGCACCGCTGAGCCAAAGTCCAGGCGGAGCTCCTTTGGGTaGCCTGGCCACTGCTCTGTGCTGAAAACACTGTCCTGTGCCCAT +
Preference number: 5 (lower is better)
Translates to: LSGTAEPKSRRSSFG*PGHCSVLKTLSCAH
Trigger: ATGGGCACAGGACAGTGTTTTCAGCACAGAGCAGTGGCCAGGCCACCCAAAGGAGCTCCGCCTGGACTTTGGCTCAGCGGTGCCACTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS-3UTR CAA 90 bp GTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACCGGCTGGTGGCGAAGTaGGCGCCCACATTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: VVSMCIGTGMGAAAVFEYRLVAK*APTLSP
Trigger: AGGGGACAATGTGGGCGCCAACTTCGCCACCAGCCG...GTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS TCA 90 bp TGCAGGGCCTCCAAGGTGATGTCCACCCTGCACTCCCCCAGAGAGTaGAGCTGGCCACTCGAAGGCTCAATGTCGAAGGGAGACACATCC +
Preference number: 5 (lower is better)
Translates to: CRASKVMSTLHSPRE*SWPLEGSMSKGDTS
Trigger: GGATGTGTCTCCCTTCGACATTGAGCCTTCGAGTGGCCAGCTTCACTCTCTGGGGGAGTGCAGGGTGGACATCACCTTGGAGGCCCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 90 bp GGGCTGATACAGTACAGGTGGCCGGAGGGCACCCCCTCATGTGCCTaGAGGATGACTGAGATGAGCTTCTGTGCCACCCTATTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: GLIQYRWPEGTPSCA*RMTEMSFCATLLLA
Trigger: TGCCAGCAATAGGGTGGCACAGAAGCTCATCTCAGTCATCCTGCAGGCACATGAGGGGGTGCCCTCCGGCCACCTGTACTGTATCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 90 bp TCCGAAGCACCACACCCTCCCAGGATAGACAACGAGGCAGCTGGATaGTGGGACCAGAGGCAGGATCACTCATCTCAGCCCCAAACCCAC +
Preference number: 5 (lower is better)
Translates to: SEAPHPPRIDNEAAG*WDQRQDHSSQPQTH
Trigger: GTGGGTTTGGGGCTGAGATGAGTGATCCTGCCTCTGGTCCCAGCATCCAGCTGCCTCGTTGTCTATCCTGGGAGGGTGTGGTGCTTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440294.6
CDS GCA 90 bp CCTTGGCCCTGCCCAGGGAGCCATCTTGGGTGGGCATGCAGAAGCTaGCCAGACACCAGGCTTCATCCTCAGACTCCTGTTTCATTGAGC +
Preference number: 5 (lower is better)
Translates to: PWPCPGSHLGWACRS*PDTRLHPQTPVSLS
Trigger: GCTCAATGAAACAGGAGTCTGAGGATGAAGCCTGGTGTCTGGGCAGCTTCTGCATGCCCACCCAAGATGGCTCCCTGGGCAGGGCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS GCA 90 bp CTGTCCTGTGCCCATTGGTACTATGTAACACACCACCCTTGGCCCTaGCCAGGGAGCCATCTTGGGTGGGCATGCAGAAGCTGCCCAGAC +
Preference number: 5 (lower is better)
Translates to: LSCAHWYYVTHHPWP*PGSHLGWACRSCPD
Trigger: GTCTGGGCAGCTTCTGCATGCCCACCCAAGATGGCTCCCTGGGCAGGGCCAAGGGTGGTGTGTTACATAGTACCAATGGGCACAGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS CCA 90 bp ACTGGAGGCAACCTGACAAGGCTCTCGAGGTCCTGTACTCCAGCCTaGCTCATGACCCGCTCATTTTCCGCAATAGCCCGTGCTTGGGCC +
Preference number: 5 (lower is better)
Translates to: TGGNLTRLSRSCTPA*LMTRSFSAIARAWA
Trigger: GGCCCAAGCACGGGCTATTGCGGAAAATGAGCGGGTCATGAGCCAGGCTGGAGTACAGGACCTCGAGAGCCTTGTCAGGTTGCCTCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS-3UTR CAA 90 bp CCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTGATGGTTTTGAAGTTGGCGCCCACATaGTCCCCTGGCACTCGTTGG +
Preference number: 5 (lower is better)
Translates to: PKWEARVPLAHRSGLMVLKLAPT*SPGTRW
Trigger: CCAACGAGTGCCAGGGGACAATGTGGGCGCCAACTT...CAAAACCATCAGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp CGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTCGTATTGGGGAGCGATaGGTGAGAATGAGCTGGCGA +
Preference number: 5 (lower is better)
Translates to: RVCAQVGGQGTACPQIWSRIGER*VRMSWR
Trigger: TCGCCAGCTCATTCTCACCAATCGCTCCCCAATACG...AGACCAGATCTGTGGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS TCA 90 bp CCAGATGGGTCAGCTCTTCCTGGGTATGAGCAGTCAACTCCAACTTaGGCTGGCACTCCTCACTTGGGCCCAGCAGGCCATGTTTGGGGG +
Preference number: 5 (lower is better)
Translates to: PDGSALPGYEQSTPT*AGTPHLGPAGHVWG
Trigger: CCCCCAAACATGGCCTGCTGGGCCCAAGTGAGGAGTGCCAGCTCAAGTTGGAGTTGACTGCTCATACCCAGGAAGAGCTGACCCATCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 90 bp CCTCACTTGGGCCCAGCAGGCCATGTTTGGGGGAGACTGTCACCATaGAGAATTCTGCTTGGTGTCCGAGGAGCTTGCCCCAGTGGAACT +
Preference number: 5 (lower is better)
Translates to: PHLGPAGHVWGRLSP*RILLGVRGACPSGT
Trigger: AGTTCCACTGGGGCAAGCTCCTCGGACACCAAGCAGAATTCTGCATGGTGACAGTCTCCCCCAAACATGGCCTGCTGGGCCCAAGTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 90 bp ACATGTATCTCTCATCATAGGAGCCTTGGCCCCGGAGCCGCAGGGTaGAGGACTTCTCACCGAGCACACCTTCCACCACCATCGTGGACT +
Preference number: 5 (lower is better)
Translates to: TCISHHRSLGPGAAG*RTSHRAHLPPPSWT
Trigger: AGTCCACGATGGTGGTGGAAGGTGTGCTCGGTGAGAAGTCCTGCACCCTGCGGCTCCGGGGCCAAGGCTCCTATGATGAGAGATACATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000478428.1
CDS CCA 90 bp CCTTTCCTGGAGGGAGACTGGGCTCTCCTTCATGCGCCATGTGGCTaGGAGCTGGCTGACGTTCCGGATCTGGATGGAGTTTGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: PFLEGDWALLHAPCG*ELADVPDLDGVCGF
Trigger: AAAGCCACAAACTCCATCCAGATCCGGAACGTCAGCCAGCTCCCAGCCACATGGCGCATGAAGGAGAGCCCAGTCTCCCTCCAGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CCA 90 bp AATGTCGAAGGGAGACACATCCTCAGGCCTTTCCTGGAGGGAGACTaGGCTCTCCTTCATGCGCCATGTGGCTGGGAGCTGGCTGACGTT +
Preference number: 5 (lower is better)
Translates to: NVEGRHILRPFLEGD*ALLHAPCGWELADV
Trigger: AACGTCAGCCAGCTCCCAGCCACATGGCGCATGAAGGAGAGCCCAGTCTCCCTCCAGGAAAGGCCTGAGGATGTGTCTCCCTTCGACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CCA 90 bp TATGTAACACACCACCCTTGGCCCTGCCCAGGGAGCCATCTTGGGTaGGCATGCAGAAGCTGCCCAGACACCAGGCTTCATCCTCAGACT +
Preference number: 5 (lower is better)
Translates to: YVTHHPWPCPGSHLG*ACRSCPDTRLHPQT
Trigger: AGTCTGAGGATGAAGCCTGGTGTCTGGGCAGCTTCTGCATGCCCACCCAAGATGGCTCCCTGGGCAGGGCCAAGGGTGGTGTGTTACATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS CCA 90 bp GTACTATGTAACACACCACCCTTGGCCCTGCCCAGGGAGCCATCTTaGGTGGGCATGCAGAAGCTGCCCAGACACCAGGCTTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: VLCNTPPLALPREPS*VGMQKLPRHQASSS
Trigger: TGAGGATGAAGCCTGGTGTCTGGGCAGCTTCTGCATGCCCACCCAAGATGGCTCCCTGGGCAGGGCCAAGGGTGGTGTGTTACATAGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS-3UTR CAA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCAGGCGGAGCTCCTTaGGGTGGCCTGGCCACTGCT +
Preference number: 5 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWPGGAP*GGLATA
Trigger: AGCAGTGGCCAGGCCACCCAAAGGAGCTCCGCCTGG...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCACTCATCATAGGAGCCTaGGCCCCGGAGCCGCAGGGT +
Preference number: 5 (lower is better)
Translates to: PPIRPSLAVQDKSSLGHPLIIGA*APEPQG
Trigger: ACCCTGCGGCTCCGGGGCCAAGGCTCCTATGATGAG...TGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS TCA 90 bp GGCCTTGATCAAGCTTGCGCTCACTTCGTCGCCGATGACCTCGGCTaGGTACAAGTTGCGGAAGACGCCGGTGAGCAAGTGCGAGATATC +
Preference number: 5 (lower is better)
Translates to: GLDQACAHFVADDLG*VQVAEDAGEQVRDI
Trigger: GATATCTCGCACTTGCTCACCGGCGTCTTCCGCAACTTGTACTCAGCCGAGGTCATCGGCGACGAAGTGAGCGCAAGCTTGATCAAGGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS GCA 90 bp GTCCCTGGGGCTTCCCAGAAATGCCTAGAACCAGTGGCTTCTTCATaGCTGACACGTGACAAGGGAGGGCCAGATGGGTCAGCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: VPGASQKCLEPVASS*LTRDKGGPDGSALP
Trigger: AGGAAGAGCTGACCCATCTGGCCCTCCCTTGTCACGTGTCAGGCATGAAGAAGCCACTGGTTCTAGGCATTTCTGGGAAGCCCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 90 bp AAGGACACGTTCACCAGCATGTTCTCCTGTGCTTGGAGCACCAGCTaGTTGTCCGCTGAGGCTGTCTCCTCCTCACACTCCTGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: KDTFTSMFSCAWSTS*LSAEAVSSSHSCFW
Trigger: CCAGAAGCAGGAGTGTGAGGAGGAGACAGCCTCAGCGGACAAGCAGCTGGTGCTCCAAGCACAGGAGAACATGCTGGTGAACGTGTCCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000478428.1
CDS GCA 90 bp CTTTGGGTGGCCTGGCCACTGCTCTGTGCTGAAAACACTGTCCTGTaGCCATTGGTACTATGTAACACACCACCCTTGGCCCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LWVAWPLLCAENTVL*PLVLCNTPPLALPR
Trigger: CCTGGGCAGGGCCAAGGGTGGTGTGTTACATAGTACCAATGGGCACAGGACAGTGTTTTCAGCACAGAGCAGTGGCCAGGCCACCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS-3UTR CAA 90 bp GTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACATGAGGGGCTGCAGGTaGGGCTTCATGATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: VVSMCIGTGMGAAAVFEYMRGCR*GFMICQ
Trigger: CTGGCAGATCATGAAGCCCAACCTGCAGCCCCTCAT...GTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp CCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGCCAGGCGGAGCTCCTTaGGGTGGCCTGGCCACTGCT +
Preference number: 5 (lower is better)
Translates to: PQIWSDGFASYLSMTSFWPGGAP*GGLATA
Trigger: AGCAGTGGCCAGGCCACCCAAAGGAGCTCCGCCTGG...CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCTCATCATAGGAGCCTaGGCCCCGGAGCCGCAGGGT +
Preference number: 5 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWLIIGA*APEPQG
Trigger: ACCCTGCGGCTCCGGGGCCAAGGCTCCTATGATGAG...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 90 bp GCTGAGCCAAAGTCCAGGCGGAGCTCCTTTGGGTGGCCTGGCCACTaGTCTGTGCTGAAAACACTGTCCTGTGCCCATTGGTACTATGTA +
Preference number: 5 (lower is better)
Translates to: AEPKSRRSSFGWPGH*SVLKTLSCAHWYYV
Trigger: TACATAGTACCAATGGGCACAGGACAGTGTTTTCAGCACAGAGCAGTGGCCAGGCCACCCAAAGGAGCTCCGCCTGGACTTTGGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS CCA 90 bp AGTATGGCGTGGAAGGCGGGAGGACTCGCAGGTAGCGGCTGGTCGTaGTGGTGTTCTGCAGCGCAATTACCATCTCATAAACTGGACCAA +
Preference number: 5 (lower is better)
Translates to: SMAWKAGGLAGSGWS*WCSAAQLPSHKLDQ
Trigger: TTGGTCCAGTTTATGAGATGGTAATTGCGCTGCAGAACACCACCACGACCAGCCGCTACCTGCGAGTCCTCCCGCCTTCCACGCCATACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
ENST00000447130.1
ENST00000469151.1
CDS CCA 90 bp TCACTGGGCTCTATGACCCCTGTGCCGGGCTCCACTTCAATGATGTaGCAGTCGCTGATCTTCCCCCACAGGTATCTGATGGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: SLGSMTPVPGSTSMM*QSLIFPHRYLMGDL
Trigger: CAAGTCACCCATCAGATACCTGTGGGGGAAGATCAGCGACTGCCACATCATTGAAGTGGAGCCCGGCACAGGGGTCATAGAGCCCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CCA 90 bp CTGGGTATGAGCAGTCAACTCCAACTTGAGCTGGCACTCCTCACTTaGGCCCAGCAGGCCATGTTTGGGGGAGACTGTCACCATGCAGAA +
Preference number: 5 (lower is better)
Translates to: LGMSSQLQLELALLT*AQQAMFGGDCHHAE
Trigger: TTCTGCATGGTGACAGTCTCCCCCAAACATGGCCTGCTGGGCCCAAGTGAGGAGTGCCAGCTCAAGTTGGAGTTGACTGCTCATACCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CCA 90 bp CCCATAAAACACCAGCAGCTCCACCAGCCGGTCTTCCTTGTCTTCTaGAACATAGGTCTCCCAATCCAGGCGGATGTCACAGGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: PIKHQQLHQPVFLVF*NIGLPIQADVTGAG
Trigger: TCCAGCCCCTGTGACATCCGCCTGGATTGGGAGACCTATGTTCCAGAAGACAAGGAAGACCGGCTGGTGGAGCTGCTGGTGTTTTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CCA 90 bp AAAACACTGTCCTGTGCCCATTGGTACTATGTAACACACCACCCTTaGCCCTGCCCAGGGAGCCATCTTGGGTGGGCATGCAGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: KTLSCAHWYYVTHHP*PCPGSHLGWACRSC
Trigger: GCAGCTTCTGCATGCCCACCCAAGATGGCTCCCTGGGCAGGGCCAAGGGTGGTGTGTTACATAGTACCAATGGGCACAGGACAGTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS CCA 90 bp TTTCAGGGGTCCCACCGCAAAGTCCTGCAGGCGATGCCTCTTCCCTaGAATCTCCCTTTCCACCTACTGAGCCCAAGTCTGATCACAGCT +
Preference number: 5 (lower is better)
Translates to: FQGSHRKVLQAMPLP*NLPFHLLSPSLITA
Trigger: AGCTGTGATCAGACTTGGGCTCAGTAGGTGGAAAGGGAGATTCCAGGGAAGAGGCATCGCCTGCAGGACTTTGCGGTGGGACCCCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478428.1
CDS-3UTR CAA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAATCGCTGCCGCGGGCCTaGATCAAGCTTGCGCTCACT +
Preference number: 5 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQSLPRA*IKLALT
Trigger: AGTGAGCGCAAGCTTGATCAAGGCCCGCGGCAGCGA...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp GTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACCGCAATAGCCCGTGCTaGGGCCTGAGTGATATGTCT +
Preference number: 5 (lower is better)
Translates to: VVSMCIGTGMGAAAVFEYRNSPC*GLSDMS
Trigger: AGACATATCACTCAGGCCCAAGCACGGGCTATTGCG...GTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTACAGCAGGTCCTGGCTaGTGGGGCCAGGGACACCCC +
Preference number: 5 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSTAGPG*WGQGHP
Trigger: GGGGTGTCCCTGGCCCCACAAGCCAGGACCTGCTGT...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp GTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACCCTAGGCTGAGACCATaGTGGAAGGGGGTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: VVSMCIGTGMGAAAVFEYPRLRP*WKGVLP
Trigger: TGGAAGAACCCCCTTCCACAATGGTCTCAGCCTAGG...GTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAAGGAGTGGGTGGGGTGTaGAGCCACCCATCAGACCCT +
Preference number: 5 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQGVGGV*SHPSDP
Trigger: AGGGTCTGATGGGTGGCTCAACACCCCACCCACTCC...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS TCA 90 bp GTTTGTGGCTTTCTGCCCCAGGCGGAGCAGACCAAACTGAAGGGCTaGGACGTTGATGATGAGGGCAGGCCCCTTAAAGACAGCCTCAAT +
Preference number: 5 (lower is better)
Translates to: VCGFLPQAEQTKLKG*DVDDEGRPLKDSLN
Trigger: ATTGAGGCTGTCTTTAAGGGGCCTGCCCTCATCATCAACGTCTCAGCCCTTCAGTTTGGTCTGCTCCGCCTGGGGCAGAAAGCCACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CCA 90 bp ATGGCGTGGAAGGCGGGAGGACTCGCAGGTAGCGGCTGGTCGTGGTaGTGTTCTGCAGCGCAATTACCATCTCATAAACTGGACCAATTT +
Preference number: 5 (lower is better)
Translates to: MAWKAGGLAGSGWSW*CSAAQLPSHKLDQF
Trigger: AAATTGGTCCAGTTTATGAGATGGTAATTGCGCTGCAGAACACCACCACGACCAGCCGCTACCTGCGAGTCCTCCCGCCTTCCACGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
ENST00000447130.1
ENST00000469151.1
CDS CCA 90 bp AACACCACTGGCGAGGGCGAGTCTTCGATTTCACACAGCAGGTCCTaGCTTGTGGGGCCAGGGACACCCCCAGTAAAGTTCAACTCAAAA +
Preference number: 5 (lower is better)
Translates to: NTTGEGESSISHSRS*LVGPGTPPVKFNSK
Trigger: TTTTGAGTTGAACTTTACTGGGGGTGTCCCTGGCCCCACAAGCCAGGACCTGCTGTGTGAAATCGAAGACTCGCCCTCGCCAGTGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS-3UTR CAA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCAAGTGCGAGATATCTaGGGTGCGCAGCGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWQVRDI*GAQRGG
Trigger: CCCTCCTCGCTGCGCACCCAAGATATCTCGCACTTG...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp AAGCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCTCGGCTGAGTACAAGTaGCGGAAGACGCCGGTGAGC +
Preference number: 5 (lower is better)
Translates to: KQNHMGKLSTGGGGSGQISAEYK*RKTPVS
Trigger: GCTCACCGGCGTCTTCCGCAACTTGTACTCAGCCGA...GATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTCGGCTGAGTACAAGTaGCGGAAGACGCCGGTGAGC +
Preference number: 5 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVSAEYK*RKTPVS
Trigger: GCTCACCGGCGTCTTCCGCAACTTGTACTCAGCCGA...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGACAGCAGGTCCTGGCTaGTGGGGCCAGGGACACCCC +
Preference number: 5 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTTAGPG*WGQGHP
Trigger: GGGGTGTCCCTGGCCCCACAAGCCAGGACCTGCTGT...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGCCCAGCAGGCCATGTTaGGGGGAGACTGTCACCATG +
Preference number: 5 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVPSRPC*GETVTM
Trigger: CATGGTGACAGTCTCCCCCAAACATGGCCTGCTGGG...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGACCGTGCAGATGAGGTaGTCCCAGTACTCGCCCCAC +
Preference number: 5 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWTVQMR*SQYSPH
Trigger: GTGGGGCGAGTACTGGGACAACCTCATCTGCACGGT...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTGTCCTTTATAAGCTCATTCCCGGCTaGGTCCCGCAGCGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: LSSDLNVVVSAVVWPVLYKLIPG*VPQRER
Trigger: CCTTTCCCGCTGCGGGACCAAGCCGGGAATGAGCTT...ATAAAGGACAGGCCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAATTCTGTGCCACCCTATaGCTGGCACTGGAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQFCATL*LALELP
Trigger: GGGCAGCTCCAGTGCCAGCAATAGGGTGGCACAGAA...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAAGAGGTTGGGGGTGCATaGGCGGATCGTGCTTCTAGC +
Preference number: 5 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQEVGGA*ADRASS
Trigger: GCTAGAAGCACGATCCGCCAATGCACCCCCAACCTC...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS GCA 90 bp CAGACTCCTGTTTCATTGAGCTGCCAACCACAGACCCACCTTTCCTaGCCACCCATGATGCTGAGAGAGGCCTCAAACTCTGCACAAACC +
Preference number: 5 (lower is better)
Translates to: QTPVSLSCQPQTHLS*PPMMLREASNSAQT
Trigger: GGTTTGTGCAGAGTTTGAGGCCTCTCTCAGCATCATGGGTGGGCAGGAAAGGTGGGTCTGTGGTTGGCAGCTCAATGAAACAGGAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS CCA 90 bp TTGAGAAACGGAGAAGGGCCTGGAGACCATAAGCCGGAAGTAGTGTaGGATCTCTGTAGTGTTGGTCAGCTTCAGGTGGTGGGTGGTCAC +
Preference number: 5 (lower is better)
Translates to: LRNGEGPGDHKPEVV*DLCSVGQLQVVGGH
Trigger: GTGACCACCCACCACCTGAAGCTGACCAACACTACAGAGATCCCACACTACTTCCGGCTTATGGTCTCCAGGCCCTTCTCCGTTTCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000478428.1
CDS-3UTR CAA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTCCCCTGGCACTCGTaGGTCCGGGACGCTAAAGAC +
Preference number: 5 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAVPWHS*VRDAKD
Trigger: GTCTTTAGCGTCCCGGACCAACGAGTGCCAGGGGAC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCCGGCTGGTGGCGAAGTaGGCGCCCACATTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVRLVAK*APTLSP
Trigger: AGGGGACAATGTGGGCGCCAACTTCGCCACCAGCCG...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTTCGCTGCCGCGGGCCTaGATCAAGCTTGCGCTCACT +
Preference number: 5 (lower is better)
Translates to: HTGLRYALSSDLNVVVSASLPRA*IKLALT
Trigger: AGTGAGCGCAAGCTTGATCAAGGCCCGCGGCAGCGA...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp GTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACCCTTTCCTAGGCTCTTaGGGGAAAACAAGACCTCCA +
Preference number: 5 (lower is better)
Translates to: VVSMCIGTGMGAAAVFEYPFLGS*GKTRPP
Trigger: TGGAGGTCTTGTTTTCCCCAAAGAGCCTAGGAAAGG...GTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGATGAGGGGCTGCAGGTaGGGCTTCATGATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVMRGCR*GFMICQ
Trigger: CTGGCAGATCATGAAGCCCAACCTGCAGCCCCTCAT...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGGGATCTGGATGGAGTTaGTGGCTTTCTGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWGSGWS*WLSAPG
Trigger: GCCTGGGGCAGAAAGCCACAAACTCCATCCAGATCC...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp AAGCAATTTTCCTGCCTCAGCCTCAGCCTCCCGAGTATCTGGGATTATAGGTGTTGGTGTCCGAGGAGCTaGCCCCAGTGGAACTGGGTA +
Preference number: 5 (lower is better)
Translates to: KQFSCLSLSLPSIWDYRCWCPRS*PQWNWV
Trigger: TACCCAGTTCCACTGGGGCAAGCTCCTCGGACACCA...ACACCTATAATCCCAGATACTCGGGAGGCTGAGGCTGAGGCAGGAAAATTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGTGGTGTCCGAGGAGCTaGCCCCAGTGGAACTGGGTA +
Preference number: 5 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVWCPRS*PQWNWV
Trigger: TACCCAGTTCCACTGGGGCAAGCTCCTCGGACACCA...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGCCCAGCAGGCCATGTTaGGGGGAGACTGTCACCATG +
Preference number: 5 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVPSRPC*GETVTM
Trigger: CATGGTGACAGTCTCCCCCAAACATGGCCTGCTGGG...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGCTGGCACTCCTCACTaGGGCCCAGCAGGCCATGTT +
Preference number: 5 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAAGTPH*GPAGHV
Trigger: AACATGGCCTGCTGGGCCCAAGTGAGGAGTGCCAGC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGGCACTCCTCACTaGGGCCCAGCAGGCCATGTT +
Preference number: 5 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSAGTPH*GPAGHV
Trigger: AACATGGCCTGCTGGGCCCAAGTGAGGAGTGCCAGC...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGACCGTGCAGATGAGGTaGTCCCAGTACTCGCCCCAC +
Preference number: 5 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVTVQMR*SQYSPH
Trigger: GTGGGGCGAGTACTGGGACAACCTCATCTGCACGGT...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTAAGCTCATTCCCGGCTaGGTCCCGCAGCGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAKLIPG*VPQRER
Trigger: CCTTTCCCGCTGCGGGACCAAGCCGGGAATGAGCTT...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS TCA 90 bp TGGCTCATGACCCGCTCATTTTCCGCAATAGCCCGTGCTTGGGCCTaGGTGATATGTCTCTCCAACATTTCAAACTCATCCAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: WLMTRSFSAIARAWA*VICLSNISNSSSRC
Trigger: GCAGCGGCTGGATGAGTTTGAAATGTTGGAGAGACATATCACTCAGGCCCAAGCACGGGCTATTGCGGAAAATGAGCGGGTCATGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS GCA 90 bp TCTGTGCTGCAATCAGAGCTCTCCTTAGAGATGGTAATGGCCACTTaGAGTCCCTGGGGCTTCCCAGAAATGCCTAGAACCAGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: SVLQSELSLEMVMAT*SPWGFPEMPRTSGF
Trigger: GAAGCCACTGGTTCTAGGCATTTCTGGGAAGCCCCAGGGACTGCAAGTGGCCATTACCATCTCTAAGGAGAGCTCTGATTGCAGCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 90 bp TCTGGAGCACACTGTGAAAATCCCTCAGCTGCAAGGCAAACACAGTaGCCTGAAAACACCACTGCGTTCCAGCAGGTTGTCCTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SGAHCENPSAARQTQ*PENTTAFQQVVLEK
Trigger: CTTCTCCAGGACAACCTGCTGGAACGCAGTGGTGTTTTCAGGGCACTGTGTTTGCCTTGCAGCTGAGGGATTTTCACAGTGTGCTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440294.6
CDS-3UTR CAA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGAAAGACCTCCGCGTTTaGGAGCTCCTGGTCTCCATG +
Preference number: 5 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWKDLRV*ELLVSM
Trigger: CATGGAGACCAGGAGCTCCAAAACGCGGAGGTCTTT...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTCAAGTGCGAGATATCTaGGGTGCGCAGCGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAQVRDI*GAQRGG
Trigger: CCCTCCTCGCTGCGCACCCAAGATATCTCGCACTTG...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAACATGCAGAATTCTGCTaGGTGTCCGAGGAGCTTGCC +
Preference number: 5 (lower is better)
Translates to: AKPHGKTQHWWWWQWTDQHAEFC*VSEELA
Trigger: GGCAAGCTCCTCGGACACCAAGCAGAATTCTGCATG...TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCATGCAGAATTCTGCTaGGTGTCCGAGGAGCTTGCC +
Preference number: 5 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWHAEFC*VSEELA
Trigger: GGCAAGCTCCTCGGACACCAAGCAGAATTCTGCATG...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGATGGTAATGGCCACTaGCAGTCCCTGGGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSDGNGH*QSLGLP
Trigger: GGGAAGCCCCAGGGACTGCAAGTGGCCATTACCATC...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGGGAAGGCTGGTCTTTTaGCTCAGGCTGTTTTGGGGG +
Preference number: 5 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVGRLVF*LRLFWG
Trigger: CCCCCAAAACAGCCTGAGCAAAAAGACCAGCCTTCC...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTTTCTGTGCCACCCTATaGCTGGCACTGGAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSFCATL*LALELP
Trigger: GGGCAGCTCCAGTGCCAGCAATAGGGTGGCACAGAA...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGGGACCACCACCTGCTaGGGGCTGATACAGTACAGG +
Preference number: 5 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSGTTTC*GLIQYR
Trigger: CCTGTACTGTATCAGCCCCAAGCAGGTGGTGGTCCC...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGGGACCACCACCTGCTaGGGGCTGATACAGTACAGG +
Preference number: 5 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAGTTTC*GLIQYR
Trigger: CCTGTACTGTATCAGCCCCAAGCAGGTGGTGGTCCC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGCCAGTACACTCCACCTaGTGCAGGATCTCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: PQIWSDGFASYLSMTSFWPVHST*CRISGL
Trigger: CAGCCCTGAGATCCTGCACAAGGTGGAGTGTACTGG...CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTCTGGCTCGCCCCATCTaGAGAAACGGAGAAGGGCCT +
Preference number: 5 (lower is better)
Translates to: HTGLRYALSSDLNVVVSALARPI*RNGEGP
Trigger: AGGCCCTTCTCCGTTTCTCAAGATGGGGCGAGCCAG...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTCTGGCTCGCCCCATCTaGAGAAACGGAGAAGGGCCT +
Preference number: 5 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSLARPI*RNGEGP
Trigger: AGGCCCTTCTCCGTTTCTCAAGATGGGGCGAGCCAG...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp AAGCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCTGGTCTGGAGGTAATTaGGTGGGTGCCTTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: KQNHMGKLSTGGGGSGQIWSGGN*VGAFAQ
Trigger: CTGGGCAAAGGCACCCACCAAATTACCTCCAGACCA...GATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp TGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGTGGAATCTCACTCCGTaGTCCAGGCTGGCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: WWVPLPSQLSFVFTGHTEWNLTP*SRLAGV
Trigger: CACTCCAGCCAGCCTGGACAACGGAGTGAGATTCCA...CTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS CCA 90 bp CAATCAGAGCTCTCCTTAGAGATGGTAATGGCCACTTGCAGTCCCTaGGGCTTCCCAGAAATGCCTAGAACCAGTGGCTTCTTCATGCCT +
Preference number: 5 (lower is better)
Translates to: QSELSLEMVMATCSP*GFPEMPRTSGFFMP
Trigger: AGGCATGAAGAAGCCACTGGTTCTAGGCATTTCTGGGAAGCCCCAGGGACTGCAAGTGGCCATTACCATCTCTAAGGAGAGCTCTGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp GTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACTCCTTTATCTGGCAGTaGTCGCACATGATGATGAAG +
Preference number: 5 (lower is better)
Translates to: VVSMCIGTGMGAAAVFEYSFIWQ*SHMMMK
Trigger: CTTCATCATCATGTGCGACAACTGCCAGATAAAGGA...GTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGGGCAGGAGCGTGCCATaGATAAGTGTGATGGTTGTC +
Preference number: 5 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVGRSVP*ISVMVV
Trigger: GACAACCATCACACTTATCAATGGCACGCTCCTGCC...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCGATGGTAATGGCCACTaGCAGTCCCTGGGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVDGNGH*QSLGLP
Trigger: GGGAAGCCCCAGGGACTGCAAGTGGCCATTACCATC...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGCGTATTGGGGAGCGATaGGTGAGAATGAGCTGGCGA +
Preference number: 5 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVRIGER*VRMSWR
Trigger: TCGCCAGCTCATTCTCACCAATCGCTCCCCAATACG...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTCCAGTACACTCCACCTaGTGCAGGATCTCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSPVHST*CRISGL
Trigger: CAGCCCTGAGATCCTGCACAAGGTGGAGTGTACTGG...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGAGCCGCTGCCGTCTTaGAATACCCTGGGAACTGAG +
Preference number: 5 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAEPLPS*NTLGTE
Trigger: CTCAGTTCCCAGGGTATTCAAAGACGGCAGCGGCTC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS GCA 90 bp TACTCCAGCCTGGCTCATGACCCGCTCATTTTCCGCAATAGCCCGTaGTTGGGCCTGAGTGATATGTCTCTCCAACATTTCAAACTCATC +
Preference number: 5 (lower is better)
Translates to: YSSLAHDPLIFRNSP*LGLSDMSLQHFKLI
Trigger: GATGAGTTTGAAATGTTGGAGAGACATATCACTCAGGCCCAAGCACGGGCTATTGCGGAAAATGAGCGGGTCATGAGCCAGGCTGGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS-3UTR CAA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTAAAGACCTCCGCGTTTaGGAGCTCCTGGTCTCCATG +
Preference number: 5 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAKDLRV*ELLVSM
Trigger: CATGGAGACCAGGAGCTCCAAAACGCGGAGGTCTTT...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGATGAATCTGGTCATCTaGACTCCCCCAATGAGGCAG +
Preference number: 5 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWMNLVI*TPPMRQ
Trigger: CTGCCTCATTGGGGGAGTCAAGATGACCAGATTCAT...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGACGGTTGCAATGGCCTaGAAACTTAGTGGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVTVAMA*KLSGGQ
Trigger: CTGGCCACCACTAAGTTTCAAGGCCATTGCAACCGT...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGCCTTTCCTAGGCTCTTaGGGGAAAACAAGACCTCCA +
Preference number: 5 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVPFLGS*GKTRPP
Trigger: TGGAGGTCTTGTTTTCCCCAAAGAGCCTAGGAAAGG...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCGGATCTGGATGGAGTTaGTGGCTTTCTGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVGSGWS*WLSAPG
Trigger: GCCTGGGGCAGAAAGCCACAAACTCCATCCAGATCC...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGCCGAAATACTCAAACTaGAGGGAGAAACGGGTCCGT +
Preference number: 5 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVPKYSN*REKRVR
Trigger: ACGGACCCGTTTCTCCCTCAAGTTTGAGTATTTCGG...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCGAAATACTCAAACTaGAGGGAGAAACGGGTCCGT +
Preference number: 5 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWPKYSN*REKRVR
Trigger: ACGGACCCGTTTCTCCCTCAAGTTTGAGTATTTCGG...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGTTTGCTCAGGCTGTTTaGGGGGCTCCCGAAATACTC +
Preference number: 5 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVFAQAV*GAPEIL
Trigger: GAGTATTTCGGGAGCCCCCAAAACAGCCTGAGCAAA...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGGAAGGCTGGTCTTTTaGCTCAGGCTGTTTTGGGGG +
Preference number: 5 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAGRLVF*LRLFWG
Trigger: CCCCCAAAACAGCCTGAGCAAAAAGACCAGCCTTCC...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTCCTAGGCTGAGACCATaGTGGAAGGGGGTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSPRLRP*WKGVLP
Trigger: TGGAAGAACCCCCTTCCACAATGGTCTCAGCCTAGG...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CCTCTAGCACCATCTGGAGCACACTGTGAAAATCCCTCAGGTAGCATTTCTAATCAACAAAGCCGACGGTaGCAATGGCCCAGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: PLAPSGAHCENPSGSISNQQSRR*QWPSPR
Trigger: TCTGGGACTGGGCCATTGCAACCGTCGGCTTTGTTG...ATTAGAAATGCTACCTGAGGGATTTTCACAGTGTGCTCCAGATGGTGCTAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS-3UTR CAA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCCGCAATAGCCCGTGCTaGGGCCTGAGTGATATGTCT +
Preference number: 5 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVRNSPC*GLSDMS
Trigger: AGACATATCACTCAGGCCCAAGCACGGGCTATTGCG...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGTCGGTGCTGGCTTCTTaGGAGGAAAAACAAGAGACT +
Preference number: 5 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWSVLAS*EEKQET
Trigger: AGTCTCTTGTTTTTCCTCCAAAGAAGCCAGCACCGA...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTACGGTTGCAATGGCCTaGAAACTTAGTGGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSTVAMA*KLSGGQ
Trigger: CTGGCCACCACTAAGTTTCAAGGCCATTGCAACCGT...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGGATTCCAAAAGGAGGTaGTTCAACAAAGCCGACGGT +
Preference number: 5 (lower is better)
Translates to: LRYALSSDLNVVVSAVVWDSKRR*FNKADG
Trigger: ACCGTCGGCTTTGTTGAACAACCTCCTTTTGGAATC...CCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp TGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGGGTTTTGCATCCTACTaGTCCATGACGTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: WWVPLPSQLSFVFTGHTEGFASY*SMTSFW
Trigger: CCAGAAGGACGTCATGGACAAGTAGGATGCAAAACC...CTCCGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS CCA 90 bp AAAGCAATCAGCTGCCCAATTCCTATGGTCACCAGCTCCTTTATCTaGCAGTTGTCGCACATGATGATGAAGGTCTGCTCTGCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: KAISCPIPMVTSSFI*QLSHMMMKVCSAFP
Trigger: AGGAAAGGCAGAGCAGACCTTCATCATCATGTGCGACAACTGCCAGATAAAGGAGCTGGTGACCATAGGAATTGGGCAGCTGATTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS-3UTR CAA 90 bp AAGCAATTTTCCTGCCTCAGCCTCAGCCTCCCGAGTATCTGGGATTATAGGTGTTCGGTGCTGGCTTCTTaGGAGGAAAAACAAGAGACT +
Preference number: 5 (lower is better)
Translates to: KQFSCLSLSLPSIWDYRCSVLAS*EEKQET
Trigger: AGTCTCTTGTTTTTCCTCCAAAGAAGCCAGCACCGA...ACACCTATAATCCCAGATACTCGGGAGGCTGAGGCTGAGGCAGGAAAATTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGATGGGTGACTTGCTGTaGTTCCACATCTTAAAAGCC +
Preference number: 5 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVMGDLL*FHILKA
Trigger: GGCTTTTAAGATGTGGAACAACAGCAAGTCACCCAT...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCATATCTGATGGGTGACTaGCTGTTGTTCCACATCTTA +
Preference number: 5 (lower is better)
Translates to: PPIRPSLAVQDKSSLGHPYLMGD*LLFHIL
Trigger: TAAGATGTGGAACAACAGCAAGTCACCCATCAGATA...TGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCGGCAGGAGCGTGCCATaGATAAGTGTGATGGTTGTC +
Preference number: 5 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVGRSVP*ISVMVV
Trigger: GACAACCATCACACTTATCAATGGCACGCTCCTGCC...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTTTGCTCAGGCTGTTTaGGGGGCTCCCGAAATACTC +
Preference number: 5 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVFAQAV*GAPEIL
Trigger: GAGTATTTCGGGAGCCCCCAAAACAGCCTGAGCAAA...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp CTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTGTCCTTTATATCTCCCTTTCCACCTaGCTGTCCAAGCTCATGAAA +
Preference number: 5 (lower is better)
Translates to: LSSDLNVVVSAVVWPVLYISLST*LSKLMK
Trigger: TTTCATGAGCTTGGACAGCAAGGTGGAAAGGGAGAT...ATAAAGGACAGGCCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS GCA 90 bp AGCACAACTCTGTTCTGGCTCTGTACTCTGGAATTCTCCTATCGGTaGTGGCTTCTTTGGAGGAAAAACAAGAGACTTGCCTCCATATCG +
Preference number: 5 (lower is better)
Translates to: STTLFWLCTLEFSYR*WLLWRKNKRLASIS
Trigger: CGATATGGAGGCAAGTCTCTTGTTTTTCCTCCAAAGAAGCCAGCACCGATAGGAGAATTCCAGAGTACAGAGCCAGAACAGAGTTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS-3UTR CAA 90 bp TTTTGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCATGAATCTGGTCATCTaGACTCCCCCAATGAGGCAG +
Preference number: 5 (lower is better)
Translates to: FCHTGLRYALSSDLNVVVMNLVI*TPPMRQ
Trigger: CTGCCTCATTGGGGGAGTCAAGATGACCAGATTCAT...GACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGCTGAAACCCACATTTTaGCAGATGAATCTGGTCATC +
Preference number: 5 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVLKPTF*QMNLVI
Trigger: GATGACCAGATTCATCTGCAAAAATGTGGGTTTCAG...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGTCCTTTATCTGGCAGTaGTCGCACATGATGATGAAG +
Preference number: 5 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVSFIWQ*SHMMMK
Trigger: CTTCATCATCATGTGCGACAACTGCCAGATAAAGGA...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp AAGCAATTTTCCTGCCTCAGCCTCAGCCTCCCGAGTATCTGGGATTATAGGTGTATGGGTGACTTGCTGTaGTTCCACATCTTAAAAGCC +
Preference number: 5 (lower is better)
Translates to: KQFSCLSLSLPSIWDYRCMGDLL*FHILKA
Trigger: GGCTTTTAAGATGTGGAACAACAGCAAGTCACCCAT...ACACCTATAATCCCAGATACTCGGGAGGCTGAGGCTGAGGCAGGAAAATTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTATCTGATGGGTGACTaGCTGTTGTTCCACATCTTA +
Preference number: 5 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVYLMGD*LLFHIL
Trigger: TAAGATGTGGAACAACAGCAAGTCACCCATCAGATA...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp TGCCATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTATCTCCCTTTCCACCTaGCTGTCCAAGCTCATGAAA +
Preference number: 5 (lower is better)
Translates to: CHTGLRYALSSDLNVVVSISLST*LSKLMK
Trigger: TTTCATGAGCTTGGACAGCAAGGTGGAAAGGGAGAT...AGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 90 bp CCACAGTGTGGTCTAACTCATCTTCGAACTCAGCAAGCTTCTTCCTaGATGAATCTTCAAGCTTCTTGTTCAGCTCTTTCTTCTGGACGG +
Preference number: 5 (lower is better)
Translates to: PQCGLTHLRTQQASS*MNLQASCSALSSGR
Trigger: CCGTCCAGAAGAAAGAGCTGAACAAGAAGCTTGAAGATTCATGCAGGAAGAAGCTTGCTGAGTTCGAAGATGAGTTAGACCACACTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CCA 90 bp ACAACTCTGTTCTGGCTCTGTACTCTGGAATTCTCCTATCGGTGCTaGCTTCTTTGGAGGAAAAACAAGAGACTTGCCTCCATATCGAGT +
Preference number: 5 (lower is better)
Translates to: TTLFWLCTLEFSYRC*LLWRKNKRLASISS
Trigger: ACTCGATATGGAGGCAAGTCTCTTGTTTTTCCTCCAAAGAAGCCAGCACCGATAGGAGAATTCCAGAGTACAGAGCCAGAACAGAGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS-3UTR CAA 90 bp CTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGTGGCCTGTCCTTTATTCTCTGGTCCTTTCTTaGGCCTTAGGAGTTAAATTC +
Preference number: 5 (lower is better)
Translates to: LSSDLNVVVSAVVWPVLYSLVLS*ALGVKF
Trigger: GAATTTAACTCCTAAGGCCAAAGAAAGGACCAGAGA...ATAAAGGACAGGCCACACCACAGCAGAGACCACCACATTGAGATCACTACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp ACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGTCTCTGGTCCTTTCTTaGGCCTTAGGAGTTAAATTC +
Preference number: 5 (lower is better)
Translates to: TGLRYALSSDLNVVVSAVSLVLS*ALGVKF
Trigger: GAATTTAACTCCTAAGGCCAAAGAAAGGACCAGAGA...CACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS-3UTR CAA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGATTCCAAAAGGAGGTaGTTCAACAAAGCCGACGGT +
Preference number: 5 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTDSKRR*FNKADG
Trigger: ACCGTCGGCTTTGTTGAACAACCTCCTTTTGGAATC...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp AAGCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCTTTCCAAGACTAATTTaGCCATACTGGTCTTCGCTA +
Preference number: 5 (lower is better)
Translates to: KQNHMGKLSTGGGGSGQIFPRLI*PYWSSL
Trigger: TAGCGAAGACCAGTATGGCAAAATTAGTCTTGGAAA...GATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp GGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTGTGGTGGGCACTTCAACTCATTaGGAAAATGTGAACACTGAT +
Preference number: 5 (lower is better)
Translates to: GLRYALSSDLNVVVSAVVGTSTH*ENVNTD
Trigger: ATCAGTGTTCACATTTTCCAAATGAGTTGAAGTGCC...CACCACAGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS CCA 90 bp TCTTTGGCCTTAGGAGTTAAATTCCATGTCAGGCTGTCCACAGTGTaGTCTAACTCATCTTCGAACTCAGCAAGCTTCTTCCTGCATGAA +
Preference number: 5 (lower is better)
Translates to: SLALGVKFHVRLSTV*SNSSSNSASFFLHE
Trigger: TTCATGCAGGAAGAAGCTTGCTGAGTTCGAAGATGAGTTAGACCACACTGTGGACAGCCTGACATGGAATTTAACTCCTAAGGCCAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS-3UTR CAA 90 bp ATTTGGTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGATTTGGTGGGTGCCTTaGCCCAGCCAATTAAGTTTT +
Preference number: 5 (lower is better)
Translates to: IWWVPLPSQLSFVFTGHTIWWVP*PSQLSF
Trigger: AAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT...CGTATGCCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCACCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS-3UTR CAA 90 bp TTTCACCAGAAATATAGATCAGATCCAAAGCAATCAGCTGCCCAATTCCTCCACGATTCCAAAAGGAGGTaGTTCAACAAAGCCGACGGT +
Preference number: 5 (lower is better)
Translates to: FHQKYRSDPKQSAAQFLHDSKRR*FNKADG
Trigger: ACCGTCGGCTTTGTTGAACAACCTCCTTTTGGAATC...GTGGAGGAATTGGGCAGCTGATTGCTTTGGATCTGATCTATATTTCTGGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS-3UTR CAA 90 bp CATACTGGTCTTCGCTATGCACTGAGTAGTGATCTCAATGTGGTGGTCTCTGCTTTTCCAAGACTAATTTaGCCATACTGGTCTTCGCTA +
Preference number: 5 (lower is better)
Translates to: HTGLRYALSSDLNVVVSAFPRLI*PYWSSL
Trigger: TAGCGAAGACCAGTATGGCAAAATTAGTCTTGGAAA...AGCAGAGACCACCACATTGAGATCACTACTCAGTGCATAGCGAAGACCAGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CCA 90 bp TTCTTCCTGCATGAATCTTCAAGCTTCTTGTTCAGCTCTTTCTTCTaGACGGAACGCTTCTCACAGCTAAATGTCAGTTTTGAACATCCA +
Preference number: 5 (lower is better)
Translates to: FFLHESSSFLFSSFF*TERFSQLNVSFEHP
Trigger: TGGATGTTCAAAACTGACATTTAGCTGTGAGAAGCGTTCCGTCCAGAAGAAAGAGCTGAACAAGAAGCTTGAAGATTCATGCAGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS TCA 72 bp GCTGAGGCTCGGGACGCTGCGCCAGCGCAAGCTGCGTaGGGCGGCGGGGCCGGGCTGCGAAGCTGTAGTGGA +
Preference number: 6 (lower is better)
Translates to: AEARDAAPAQAA*GGGAGLRSCSG
Trigger: TCCACTACAGCTTCGCAGCCCGGCCCCGCCGCCTCACGCAGCTTGCGCTGGCGCAGCGTCCCGAGCCTCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS TCA 72 bp TGGGTGCGCAGCGAGGAGGGGCGCAGACGAAGCAGCTaGGGCTCGGGACGCTGCGCCAGCGCAAGCTGCGTG +
Preference number: 6 (lower is better)
Translates to: WVRSEEGRRRSS*GSGRCASASCV
Trigger: CACGCAGCTTGCGCTGGCGCAGCGTCCCGAGCCTCAGCTGCTTCGTCTGCGCCCCTCCTCGCTGCGCACCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS GCA 72 bp AGCCGGGCGCCTGGGGCCTTCTGGCTGCCCCCACTCTaGTCATCCAGCCTCGGGCCAGCCTTTCCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: SRAPGAFWLPPL*SSSLGPAFPWA
Trigger: AGCCCAGGGAAAGGCTGGCCCGAGGCTGGATGAGCAGAGTGGGGGCAGCCAGAAGGCCCCAGGCGCCCGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478428.1
CDS CAA 90 bp GGCTGGGGCTGCTGGACCCGGCTGGTGGCGAAGTTGGCGCCCACATaGTCCCCTGGCACTCGTTGGTCCGGGACGCTAAAGACCTCCGCG +
Preference number: 6 (lower is better)
Translates to: GWGCWTRLVAKLAPT*SPGTRWSGTLKTSA
Trigger: CGCGGAGGTCTTTAGCGTCCCGGACCAACGAGTGCCAGGGGACAATGTGGGCGCCAACTTCGCCACCAGCCGGGTCCAGCAGCCCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CAA 72 bp GCTGGCTGGGGCTGCTGGACCCGGCTGGTGGCGAAGTaGGCGCCCACATTGTCCCCTGGCACTCGTTGGTCC +
Preference number: 6 (lower is better)
Translates to: AGWGCWTRLVAK*APTLSPGTRWS
Trigger: GGACCAACGAGTGCCAGGGGACAATGTGGGCGCCAACTTCGCCACCAGCCGGGTCCAGCAGCCCCAGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS TCA 72 bp GAGCTGGCGAGTCACACGGGTCCTCAGTGGCACCGCTaGGCCAAAGTCCAGGCGGAGCTCCTTTGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: ELASHTGPQWHR*AKVQAELLWVA
Trigger: GGCCACCCAAAGGAGCTCCGCCTGGACTTTGGCTCAGCGGTGCCACTGAGGACCCGTGTGACTCGCCAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000477260.1
CDS GCA 72 bp CTCAGGGAGCTGATGGGGCAGCCCACCGCTGCCATGTaGACTGGGATGACTTCCGGCAGCAGGTCTCCCACC +
Preference number: 6 (lower is better)
Translates to: LRELMGQPTAAM*TGMTSGSRSPT
Trigger: GGTGGGAGACCTGCTGCCGGAAGTCATCCCAGTGCACATGGCAGCGGTGGGCTGCCCCATCAGCTCCCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 72 bp GGTGGTCCTCAGGGAGCTGATGGGGCAGCCCACCGCTaGCATGTGCACTGGGATGACTTCCGGCAGCAGGTC +
Preference number: 6 (lower is better)
Translates to: GGPQGADGAAHR*HVHWDDFRQQV
Trigger: GACCTGCTGCCGGAAGTCATCCCAGTGCACATGGCAGCGGTGGGCTGCCCCATCAGCTCCCTGAGGACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 72 bp GTCCCTGGCCAGCGGCATGCTGGCATGGCTCCCAGTTaGTGGGCCTCATGTGGGCAAGCCCAGGGTACCTAC +
Preference number: 6 (lower is better)
Translates to: VPGQRHAGMAPS*WASCGQAQGTY
Trigger: GTAGGTACCCTGGGCTTGCCCACATGAGGCCCAGCAACTGGGAGCCATGCCAGCATGCCGCTGGCCAGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS CCA 72 bp CCGGCTGGTGGCGAAGTTGGCGCCCACATTGTCCCCTaGCACTCGTTGGTCCGGGACGCTAAAGACCTCCGC +
Preference number: 6 (lower is better)
Translates to: PAGGEVGAHIVP*HSLVRDAKDLR
Trigger: GCGGAGGTCTTTAGCGTCCCGGACCAACGAGTGCCAGGGGACAATGTGGGCGCCAACTTCGCCACCAGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CCA 72 bp GGAGCTGATGGGGCAGCCCACCGCTGCCATGTGCACTaGGATGACTTCCGGCAGCAGGTCTCCCACCGTGCA +
Preference number: 6 (lower is better)
Translates to: GADGAAHRCHVH*DDFRQQVSHRA
Trigger: TGCACGGTGGGAGACCTGCTGCCGGAAGTCATCCCAGTGCACATGGCAGCGGTGGGCTGCCCCATCAGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CCA 72 bp CCTGGCCAGCGGCATGCTGGCATGGCTCCCAGTTGCTaGGCCTCATGTGGGCAAGCCCAGGGTACCTACAGC +
Preference number: 6 (lower is better)
Translates to: PGQRHAGMAPSC*ASCGQAQGTYS
Trigger: GCTGTAGGTACCCTGGGCTTGCCCACATGAGGCCCAGCAACTGGGAGCCATGCCAGCATGCCGCTGGCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS GCA 72 bp GGGGCCAGCGCTGTGCTAACCTGGCCCTCGGGTCCCTaGACCTCACTCTCTCTAGGGGATGCTGTGGTATGG +
Preference number: 6 (lower is better)
Translates to: GASAVLTWPSGP*TSLSLGDAVVW
Trigger: CCATACCACAGCATCCCCTAGAGAGAGTGAGGTGCAGGGACCCGAGGGCCAGGTTAGCACAGCGCTGGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440294.6
CDS CCA 72 bp GCGAGGGAGGAATACAAGGAGGACTTCCAGGTGGGCTaGCTGGGGCTGCTGGACCCGGCTGGTGGCGAAGTT +
Preference number: 6 (lower is better)
Translates to: AREEYKEDFQVG*LGLLDPAGGEV
Trigger: AACTTCGCCACCAGCCGGGTCCAGCAGCCCCAGCCAGCCCACCTGGAAGTCCTCCTTGTATTCCTCCCTCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CCA 72 bp CTGGGAACATCCCCAGTCCCAGAGCGAAGTATGGCGTaGAAGGCGGGAGGACTCGCAGGTAGCGGCTGGTCG +
Preference number: 6 (lower is better)
Translates to: LGTSPVPERSMA*KAGGLAGSGWS
Trigger: CGACCAGCCGCTACCTGCGAGTCCTCCCGCCTTCCACGCCATACTTCGCTCTGGGACTGGGGATGTTCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CCA 72 bp GGGACCACCACCTGCTTGGGGCTGATACAGTACAGGTaGCCGGAGGGCACCCCCTCATGTGCCTGCAGGATG +
Preference number: 6 (lower is better)
Translates to: GTTTCLGLIQYR*PEGTPSCACRM
Trigger: CATCCTGCAGGCACATGAGGGGGTGCCCTCCGGCCACCTGTACTGTATCAGCCCCAAGCAGGTGGTGGTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CCA 72 bp GGTTGCAATGGCCCAGTCCCAGAGCGAAGTATGGCGTaGAAGGCGGGAGGACTCGCAGGTAGCGGCTGGTCG +
Preference number: 6 (lower is better)
Translates to: GCNGPVPERSMA*KAGGLAGSGWS
Trigger: CGACCAGCCGCTACCTGCGAGTCCTCCCGCCTTCCACGCCATACTTCGCTCTGGGACTGGGCCATTGCAACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS CCA 72 bp ACACCGGTGACACCAGTCCCAGAGCGAAGTATGGCGTaGAAGGCGGGAGGACTCGCAGGTAGCGGCTGGTCG +
Preference number: 6 (lower is better)
Translates to: TPVTPVPERSMA*KAGGLAGSGWS
Trigger: CGACCAGCCGCTACCTGCGAGTCCTCCCGCCTTCCACGCCATACTTCGCTCTGGGACTGGTGTCACCGGTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469151.1
CDS CCA 72 bp CCACTCTGCTCATCCAGCCTCGGGCCAGCCTTTCCCTaGGCTCCTCTGCTGACTTCTCCACCCATGCCCGTC +
Preference number: 6 (lower is better)
Translates to: PLCSSSLGPAFP*APLLTSPPMPV
Trigger: GACGGGCATGGGTGGAGAAGTCAGCAGAGGAGCCCAGGGAAAGGCTGGCCCGAGGCTGGATGAGCAGAGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478428.1
CDS CCA 72 bp AGCTCCACACTTAGCCTGCCCAGCAATAGGCATTGTTaGGGCAAGCCGGGCGCCTGGGGCCTTCTGGCTGCC +
Preference number: 6 (lower is better)
Translates to: SSTLSLPSNRHC*GKPGAWGLLAA
Trigger: GGCAGCCAGAAGGCCCCAGGCGCCCGGCTTGCCCCAACAATGCCTATTGCTGGGCAGGCTAAGTGTGGAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478428.1
CDS CAA 72 bp TGCTGGACCCGGCTGGTGGCGAAGTTGGCGCCCACATaGTCCCCTGGCACTCGTTGGTCCGGGACGCTAAAG +
Preference number: 6 (lower is better)
Translates to: CWTRLVAKLAPT*SPGTRWSGTLK
Trigger: CTTTAGCGTCCCGGACCAACGAGTGCCAGGGGACAATGTGGGCGCCAACTTCGCCACCAGCCGGGTCCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CAA 90 bp CCGGCTGGTGGCGAAGTTGGCGCCCACATTGTCCCCTGGCACTCGTaGGTCCGGGACGCTAAAGACCTCCGCGTTTTGGAGCTCCTGGTC +
Preference number: 6 (lower is better)
Translates to: PAGGEVGAHIVPWHS*VRDAKDLRVLELLV
Trigger: GACCAGGAGCTCCAAAACGCGGAGGTCTTTAGCGTCCCGGACCAACGAGTGCCAGGGGACAATGTGGGCGCCAACTTCGCCACCAGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CCA 72 bp TTGCGGAAGACGCCGGTGAGCAAGTGCGAGATATCTTaGGTGCGCAGCGAGGAGGGGCGCAGACGAAGCAGC +
Preference number: 6 (lower is better)
Translates to: LRKTPVSKCEIS*VRSEEGRRRSS
Trigger: GCTGCTTCGTCTGCGCCCCTCCTCGCTGCGCACCCAAGATATCTCGCACTTGCTCACCGGCGTCTTCCGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CAA 72 bp GTTGCGGAAGACGCCGGTGAGCAAGTGCGAGATATCTaGGGTGCGCAGCGAGGAGGGGCGCAGACGAAGCAG +
Preference number: 6 (lower is better)
Translates to: VAEDAGEQVRDI*GAQRGGAQTKQ
Trigger: CTGCTTCGTCTGCGCCCCTCCTCGCTGCGCACCCAAGATATCTCGCACTTGCTCACCGGCGTCTTCCGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CAA 72 bp GTGGCACCGCTGAGCCAAAGTCCAGGCGGAGCTCCTTaGGGTGGCCTGGCCACTGCTCTGTGCTGCAATCAG +
Preference number: 6 (lower is better)
Translates to: VAPLSQSPGGAP*GGLATALCCNQ
Trigger: CTGATTGCAGCACAGAGCAGTGGCCAGGCCACCCAAAGGAGCTCCGCCTGGACTTTGGCTCAGCGGTGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CAA 72 bp CCACTGTTTGGGGAGACCCTGAAGGCCACAGCGGCCTaGGCTGGCTCCTGCTGGCCCATCAGCATAGTCCAG +
Preference number: 6 (lower is better)
Translates to: PLFGETLKATAA*AGSCWPISIVQ
Trigger: CTGGACTATGCTGATGGGCCAGCAGGAGCCAGCCAAGGCCGCTGTGGCCTTCAGGGTCTCCCCAAACAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS CAA 90 bp TGGTCCACGAACTCCTCGTGGCGCTCATTCTCGCTGCCGCGGGCCTaGATCAAGCTTGCGCTCACTTCGTCGCCGATGACCTCGGCTGAG +
Preference number: 6 (lower is better)
Translates to: WSTNSSWRSFSLPRA*IKLALTSSPMTSAE
Trigger: CTCAGCCGAGGTCATCGGCGACGAAGTGAGCGCAAGCTTGATCAAGGCCCGCGGCAGCGAGAATGAGCGCCACGAGGAGTTCGTGGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CAA 90 bp GGGTCCTCAGTGGCACCGCTGAGCCAAAGTCCAGGCGGAGCTCCTTaGGGTGGCCTGGCCACTGCTCTGTGCTGCAATCAGAGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: GSSVAPLSQSPGGAP*GGLATALCCNQSSP
Trigger: AGGAGAGCTCTGATTGCAGCACAGAGCAGTGGCCAGGCCACCCAAAGGAGCTCCGCCTGGACTTTGGCTCAGCGGTGCCACTGAGGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CAA 90 bp GCAGCCACCCTCAGGGGTATCAGGGCACACAAGCTCATTCCCGGCTaGGTCCCGCAGCGGGAAAGGTGGCCCATAAAACACCAGCAGCTC +
Preference number: 6 (lower is better)
Translates to: AATLRGIRAHKLIPG*VPQRERWPIKHQQL
Trigger: GAGCTGCTGGTGTTTTATGGGCCACCTTTCCCGCTGCGGGACCAAGCCGGGAATGAGCTTGTGTGCCCTGATACCCCTGAGGGTGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CAA 90 bp GCCTCAGGGCTGGTGAGGCAACATGTATCTCTCATCATAGGAGCCTaGGCCCCGGAGCCGCAGGGTGCAGGACTTCTCACCGAGCACACC +
Preference number: 6 (lower is better)
Translates to: ASGLVRQHVSLIIGA*APEPQGAGLLTEHT
Trigger: GGTGTGCTCGGTGAGAAGTCCTGCACCCTGCGGCTCCGGGGCCAAGGCTCCTATGATGAGAGATACATGTTGCCTCACCAGCCCTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000478428.1
CDS GCA 72 bp GCTGAGTACAAGTTGCGGAAGACGCCGGTGAGCAAGTaGGAGATATCTTGGGTGCGCAGCGAGGAGGGGCGC +
Preference number: 6 (lower is better)
Translates to: AEYKLRKTPVSK*EISWVRSEEGR
Trigger: GCGCCCCTCCTCGCTGCGCACCCAAGATATCTCGCACTTGCTCACCGGCGTCTTCCGCAACTTGTACTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS GCA 72 bp TCTCATCATAGGAGCCTTGGCCCCGGAGCCGCAGGGTaGAGGACTTCTCACCGAGCACACCTTCCACCACCA +
Preference number: 6 (lower is better)
Translates to: SHHRSLGPGAAG*RTSHRAHLPPP
Trigger: TGGTGGTGGAAGGTGTGCTCGGTGAGAAGTCCTGCACCCTGCGGCTCCGGGGCCAAGGCTCCTATGATGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000478428.1
CDS GCA 72 bp CCATACTGCCGCCGTAGTCCAGCTCCACACTTAGCCTaGCCAGCAATAGGCATTGTTGGGGCAAGCCGGGCG +
Preference number: 6 (lower is better)
Translates to: PYCRRSPAPHLA*PAIGIVGASRA
Trigger: CGCCCGGCTTGCCCCAACAATGCCTATTGCTGGGCAGGCTAAGTGTGGAGCTGGACTACGGCGGCAGTATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478428.1
CDS CCA 72 bp ACTCGTTGGTCCGGGACGCTAAAGACCTCCGCGTTTTaGAGCTCCTGGTCTCCATGGCAACCGAGACGCCGC +
Preference number: 6 (lower is better)
Translates to: TRWSGTLKTSAF*SSWSPWQPRRR
Trigger: GCGGCGTCTCGGTTGCCATGGAGACCAGGAGCTCCAAAACGCGGAGGTCTTTAGCGTCCCGGACCAACGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CCA 72 bp GCGAAGTTGGCGCCCACATTGTCCCCTGGCACTCGTTaGTCCGGGACGCTAAAGACCTCCGCGTTTTGGAGC +
Preference number: 6 (lower is better)
Translates to: AKLAPTLSPGTR*SGTLKTSAFWS
Trigger: GCTCCAAAACGCGGAGGTCTTTAGCGTCCCGGACCAACGAGTGCCAGGGGACAATGTGGGCGCCAACTTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CCA 72 bp TCCCGAATCTGCTGCAGCTGGTCCACGAACTCCTCGTaGCGCTCATTCTCGCTGCCGCGGGCCTTGATCAAG +
Preference number: 6 (lower is better)
Translates to: SRICCSWSTNSS*RSFSLPRALIK
Trigger: CTTGATCAAGGCCCGCGGCAGCGAGAATGAGCGCCACGAGGAGTTCGTGGACCAGCTGCAGCAGATTCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CCA 72 bp GTTTGGGGAGACCCTGAAGGCCACAGCGGCCTTGGCTaGCTCCTGCTGGCCCATCAGCATAGTCCAGTAGCT +
Preference number: 6 (lower is better)
Translates to: VWGDPEGHSGLG*LLLAHQHSPVA
Trigger: AGCTACTGGACTATGCTGATGGGCCAGCAGGAGCCAGCCAAGGCCGCTGTGGCCTTCAGGGTCTCCCCAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308059.11
CDS CCA 72 bp GCTGAGAGAGGCCTCAAACTCTGCACAAACCGTCCCTaGCCAGCGGCATGCTGGCATGGCTCCCAGTTGCTG +
Preference number: 6 (lower is better)
Translates to: AERGLKLCTNRP*PAACWHGSQLL
Trigger: CAGCAACTGGGAGCCATGCCAGCATGCCGCTGGCCAGGGACGGTTTGTGCAGAGTTTGAGGCCTCTCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS CAA 72 bp CACTCGTTGGTCCGGGACGCTAAAGACCTCCGCGTTTaGGAGCTCCTGGTCTCCATGGCAACCGAGACGCCG +
Preference number: 6 (lower is better)
Translates to: HSLVRDAKDLRV*ELLVSMATETP
Trigger: CGGCGTCTCGGTTGCCATGGAGACCAGGAGCTCCAAAACGCGGAGGTCTTTAGCGTCCCGGACCAACGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CAA 72 bp GGCGAAGTTGGCGCCCACATTGTCCCCTGGCACTCGTaGGTCCGGGACGCTAAAGACCTCCGCGTTTTGGAG +
Preference number: 6 (lower is better)
Translates to: GEVGAHIVPWHS*VRDAKDLRVLE
Trigger: CTCCAAAACGCGGAGGTCTTTAGCGTCCCGGACCAACGAGTGCCAGGGGACAATGTGGGCGCCAACTTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CAA 72 bp AACTCCTCGTGGCGCTCATTCTCGCTGCCGCGGGCCTaGATCAAGCTTGCGCTCACTTCGTCGCCGATGACC +
Preference number: 6 (lower is better)
Translates to: NSSWRSFSLPRA*IKLALTSSPMT
Trigger: GGTCATCGGCGACGAAGTGAGCGCAAGCTTGATCAAGGCCCGCGGCAGCGAGAATGAGCGCCACGAGGAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CAA 72 bp AGGGCCAGGAGCTCTGTGGTCCTGGCTCGCCCCATCTaGAGAAACGGAGAAGGGCCTGGAGACCATAAGCCG +
Preference number: 6 (lower is better)
Translates to: RARSSVVLARPI*RNGEGPGDHKP
Trigger: CGGCTTATGGTCTCCAGGCCCTTCTCCGTTTCTCAAGATGGGGCGAGCCAGGACCACAGAGCTCCTGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000478428.1
CDS CAA 90 bp CTTCTGGCCAGGGCCAGGAGCTCTGTGGTCCTGGCTCGCCCCATCTaGAGAAACGGAGAAGGGCCTGGAGACCATAAGCCGGAAGTAGTG +
Preference number: 6 (lower is better)
Translates to: LLARARSSVVLARPI*RNGEGPGDHKPEVV
Trigger: CACTACTTCCGGCTTATGGTCTCCAGGCCCTTCTCCGTTTCTCAAGATGGGGCGAGCCAGGACCACAGAGCTCCTGGCCCTGGCCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000478428.1
CDS TCA 72 bp GCTCACTCAGCACCCCAGAGCAGGGCTGCTCGGGAATaGGGTCACTGGCCTGGCACTGGAATTCCATACTGC +
Preference number: 6 (lower is better)
Translates to: AHSAPQSRAARE*GHWPGTGIPYC
Trigger: GCAGTATGGAATTCCAGTGCCAGGCCAGTGACCTCATTCCCGAGCAGCCCTGCTCTGGGGTGCTGAGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000478428.1
CDS GCA 72 bp GGCCCAGCAGGCCATGTTTGGGGGAGACTGTCACCATaGAGAATTCTGCTTGGTGTCCGAGGAGCTTGCCCC +
Preference number: 6 (lower is better)
Translates to: GPAGHVWGRLSP*RILLGVRGACP
Trigger: GGGGCAAGCTCCTCGGACACCAAGCAGAATTCTGCATGGTGACAGTCTCCCCCAAACATGGCCTGCTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 72 bp CAGTACAGGTGGCCGGAGGGCACCCCCTCATGTGCCTaGAGGATGACTGAGATGAGCTTCTGTGCCACCCTA +
Preference number: 6 (lower is better)
Translates to: QYRWPEGTPSCA*RMTEMSFCATL
Trigger: TAGGGTGGCACAGAAGCTCATCTCAGTCATCCTGCAGGCACATGAGGGGGTGCCCTCCGGCCACCTGTACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 72 bp CTGCCCACCCATGATGCTGAGAGAGGCCTCAAACTCTaGACAAACCGTCCCTGGCCAGCGGCATGCTGGCAT +
Preference number: 6 (lower is better)
Translates to: LPTHDAERGLKL*TNRPWPAACWH
Trigger: ATGCCAGCATGCCGCTGGCCAGGGACGGTTTGTGCAGAGTTTGAGGCCTCTCTCAGCATCATGGGTGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS CCA 72 bp GGCGAGGGCGAGTCTTCGATTTCACACAGCAGGTCCTaGCTTGTGGGGCCAGGGACACCCCCAGTAAAGTTC +
Preference number: 6 (lower is better)
Translates to: GEGESSISHSRS*LVGPGTPPVKF
Trigger: GAACTTTACTGGGGGTGTCCCTGGCCCCACAAGCCAGGACCTGCTGTGTGAAATCGAAGACTCGCCCTCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CCA 72 bp GAGGGAGACTGGGCTCTCCTTCATGCGCCATGTGGCTaGGAGCTGGCTGACGTTCCGGATCTGGATGGAGTT +
Preference number: 6 (lower is better)
Translates to: EGDWALLHAPCG*ELADVPDLDGV
Trigger: AACTCCATCCAGATCCGGAACGTCAGCCAGCTCCCAGCCACATGGCGCATGAAGGAGAGCCCAGTCTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS TCA 72 bp CAAGCTTGCGCTCACTTCGTCGCCGATGACCTCGGCTaGGTACAAGTTGCGGAAGACGCCGGTGAGCAAGTG +
Preference number: 6 (lower is better)
Translates to: QACAHFVADDLG*VQVAEDAGEQV
Trigger: CACTTGCTCACCGGCGTCTTCCGCAACTTGTACTCAGCCGAGGTCATCGGCGACGAAGTGAGCGCAAGCTTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS GCA 72 bp TGCAGGTCCAGTTTCAGGGGTCCCACCGCAAAGTCCTaGAGGCGATGCCTCTTCCCTGGAATCTCCCTTTCC +
Preference number: 6 (lower is better)
Translates to: CRSSFRGPTAKS*RRCLFPGISLS
Trigger: GGAAAGGGAGATTCCAGGGAAGAGGCATCGCCTGCAGGACTTTGCGGTGGGACCCCTGAAACTGGACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000478428.1
CDS GCA 72 bp TGCCCAGGGAGCCATCTTGGGTGGGCATGCAGAAGCTaGCCAGACACCAGGCTTCATCCTCAGACTCCTGTT +
Preference number: 6 (lower is better)
Translates to: CPGSHLGWACRS*PDTRLHPQTPV
Trigger: AACAGGAGTCTGAGGATGAAGCCTGGTGTCTGGGCAGCTTCTGCATGCCCACCCAAGATGGCTCCCTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS GCA 72 bp GCCCATTGGTACTATGTAACACACCACCCTTGGCCCTaGCCAGGGAGCCATCTTGGGTGGGCATGCAGAAGC +
Preference number: 6 (lower is better)
Translates to: AHWYYVTHHPWP*PGSHLGWACRS
Trigger: GCTTCTGCATGCCCACCCAAGATGGCTCCCTGGGCAGGGCCAAGGGTGGTGTGTTACATAGTACCAATGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS CCA 72 bp ACTGGGCTCTCCTTCATGCGCCATGTGGCTGGGAGCTaGCTGACGTTCCGGATCTGGATGGAGTTTGTGGCT +
Preference number: 6 (lower is better)
Translates to: TGLSFMRHVAGS*LTFRIWMEFVA
Trigger: AGCCACAAACTCCATCCAGATCCGGAACGTCAGCCAGCTCCCAGCCACATGGCGCATGAAGGAGAGCCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CAA 72 bp ACCAGCATGTTCTCCTGTGCTTGGAGCACCAGCTGCTaGTCCGCTGAGGCTGTCTCCTCCTCACACTCCTGC +
Preference number: 6 (lower is better)
Translates to: TSMFSCAWSTSC*SAEAVSSSHSC
Trigger: GCAGGAGTGTGAGGAGGAGACAGCCTCAGCGGACAAGCAGCTGGTGCTCCAAGCACAGGAGAACATGCTGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000478428.1
CDS CAA 72 bp CTGGTGAGGCAACATGTATCTCTCATCATAGGAGCCTaGGCCCCGGAGCCGCAGGGTGCAGGACTTCTCACC +
Preference number: 6 (lower is better)
Translates to: LVRQHVSLIIGA*APEPQGAGLLT
Trigger: GGTGAGAAGTCCTGCACCCTGCGGCTCCGGGGCCAAGGCTCCTATGATGAGAGATACATGTTGCCTCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000478428.1
CDS CAA 90 bp AAGCTTGCGCTCACTTCGTCGCCGATGACCTCGGCTGAGTACAAGTaGCGGAAGACGCCGGTGAGCAAGTGCGAGATATCTTGGGTGCGC +
Preference number: 6 (lower is better)
Translates to: KLALTSSPMTSAEYK*RKTPVSKCEISWVR
Trigger: GCGCACCCAAGATATCTCGCACTTGCTCACCGGCGTCTTCCGCAACTTGTACTCAGCCGAGGTCATCGGCGACGAAGTGAGCGCAAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CAA 90 bp GTGGCCTGGCCACTGCTCTGTGCTGAAAACACTGTCCTGTGCCCATaGGTACTATGTAACACACCACCCTTGGCCCTGCCCAGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: VAWPLLCAENTVLCP*VLCNTPPLALPREP
Trigger: TGGCTCCCTGGGCAGGGCCAAGGGTGGTGTGTTACATAGTACCAATGGGCACAGGACAGTGTTTTCAGCACAGAGCAGTGGCCAGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS CAA 90 bp TCCAACTTGAGCTGGCACTCCTCACTTGGGCCCAGCAGGCCATGTTaGGGGGAGACTGTCACCATGCAGAATTCTGCTTGGTGTCCGAGG +
Preference number: 6 (lower is better)
Translates to: SNLSWHSSLGPSRPC*GETVTMQNSAWCPR
Trigger: CCTCGGACACCAAGCAGAATTCTGCATGGTGACAGTCTCCCCCAAACATGGCCTGCTGGGCCCAAGTGAGGAGTGCCAGCTCAAGTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CAA 90 bp TCCCGGGGCCAGCTCAAACACCGAAGGCAGGATTCCAAAAGGAGGTaGTTCAACAAAGCCGACGGTTGCAATGGCCCAGTCCCAGAGCGA +
Preference number: 6 (lower is better)
Translates to: SRGQLKHRRQDSKRR*FNKADGCNGPVPER
Trigger: TCGCTCTGGGACTGGGCCATTGCAACCGTCGGCTTTGTTGAACAACCTCCTTTTGGAATCCTGCCTTCGGTGTTTGAGCTGGCCCCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS TCA 72 bp TCCAAGGTGATGTCCACCCTGCACTCCCCCAGAGAGTaGAGCTGGCCACTCGAAGGCTCAATGTCGAAGGGA +
Preference number: 6 (lower is better)
Translates to: SKVMSTLHSPRE*SWPLEGSMSKG
Trigger: TCCCTTCGACATTGAGCCTTCGAGTGGCCAGCTTCACTCTCTGGGGGAGTGCAGGGTGGACATCACCTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS TCA 72 bp CTTCCTCCCCTTAGCCTAGCCATCAGAAGGACCTTCTaGAAACCCAGGGTTGCTTCCCTGCTGCCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: LPPLSLAIRRTF*KPRVASLLPPP
Trigger: GGGAGGAGGCAGCAGGGAAGCAACCCTGGGTTTTCAGAAGGTCCTTCTGATGGCTAGGCTAAGGGGAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440294.6
CDS TCA 72 bp CCAGGCCGGAAGAGCTCACCTTGCTGTCCAAGCTCATaGAACCCAGGGCGTAGCCAGTACACTCCACCTTGT +
Preference number: 6 (lower is better)
Translates to: PGRKSSPCCPSS*NPGRSQYTPPC
Trigger: ACAAGGTGGAGTGTACTGGCTACGCCCTGGGTTTCATGAGCTTGGACAGCAAGGTGAGCTCTTCCGGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478428.1
CDS GCA 72 bp TTCACCAGCATGTTCTCCTGTGCTTGGAGCACCAGCTaGTTGTCCGCTGAGGCTGTCTCCTCCTCACACTCC +
Preference number: 6 (lower is better)
Translates to: FTSMFSCAWSTS*LSAEAVSSSHS
Trigger: GGAGTGTGAGGAGGAGACAGCCTCAGCGGACAAGCAGCTGGTGCTCCAAGCACAGGAGAACATGCTGGTGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000478428.1
CDS CCA 72 bp TGTGGGATCTCTGTAGTGTTGGTCAGCTTCAGGTGGTaGGTGGTCACCAGCTCACTCAGCACCCCAGAGCAG +
Preference number: 6 (lower is better)
Translates to: CGISVVLVSFRW*VVTSSLSTPEQ
Trigger: CTGCTCTGGGGTGCTGAGTGAGCTGGTGACCACCCACCACCTGAAGCTGACCAACACTACAGAGATCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000478428.1
CDS CCA 72 bp GAGAAGGACACGTTCACCAGCATGTTCTCCTGTGCTTaGAGCACCAGCTGCTTGTCCGCTGAGGCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: EKDTFTSMFSCA*STSCLSAEAVS
Trigger: GGAGACAGCCTCAGCGGACAAGCAGCTGGTGCTCCAAGCACAGGAGAACATGCTGGTGAACGTGTCCTTCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000478428.1
CDS CCA 72 bp AGCACCACACCCTCCCAGGATAGACAACGAGGCAGCTaGATGCTGGGACCAGAGGCAGGATCACTCATCTCA +
Preference number: 6 (lower is better)
Translates to: STTPSQDRQRGS*MLGPEAGSLIS
Trigger: TGAGATGAGTGATCCTGCCTCTGGTCCCAGCATCCAGCTGCCTCGTTGTCTATCCTGGGAGGGTGTGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440294.6
CDS CCA 72 bp GCCCTGAAAACACCACTGCGTTCCAGCAGGTTGTCCTaGAGAAGGCTGGGGCATGGCAGGAATTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: ALKTPLRSSRLS*RRLGHGRNSSS
Trigger: GGAGGAAGAATTCCTGCCATGCCCCAGCCTTCTCCAGGACAACCTGCTGGAACGCAGTGGTGTTTTCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440294.6
CDS TCA 72 bp TTTCTGCCCCAGGCGGAGCAGACCAAACTGAAGGGCTaGGACGTTGATGATGAGGGCAGGCCCCTTAAAGAC +
Preference number: 6 (lower is better)
Translates to: FLPQAEQTKLKG*DVDDEGRPLKD
Trigger: GTCTTTAAGGGGCCTGCCCTCATCATCAACGTCTCAGCCCTTCAGTTTGGTCTGCTCCGCCTGGGGCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS TCA 72 bp TCAGCTCTTCCTGGGTATGAGCAGTCAACTCCAACTTaGGCTGGCACTCCTCACTTGGGCCCAGCAGGCCAT +
Preference number: 6 (lower is better)
Translates to: SALPGYEQSTPT*AGTPHLGPAGH
Trigger: ATGGCCTGCTGGGCCCAAGTGAGGAGTGCCAGCTCAAGTTGGAGTTGACTGCTCATACCCAGGAAGAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS TCA 72 bp ATGCCTAGAACCAGTGGCTTCTTCATGCCTGACACGTaGCAAGGGAGGGCCAGATGGGTCAGCTCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: MPRTSGFFMPDT*QGRARWVSSSW
Trigger: CCAGGAAGAGCTGACCCATCTGGCCCTCCCTTGTCACGTGTCAGGCATGAAGAAGCCACTGGTTCTAGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 72 bp GCCATGTTTGGGGGAGACTGTCACCATGCAGAATTCTaGTTGGTGTCCGAGGAGCTTGCCCCAGTGGAACTG +
Preference number: 6 (lower is better)
Translates to: AMFGGDCHHAEF*LVSEELAPVEL
Trigger: CAGTTCCACTGGGGCAAGCTCCTCGGACACCAAGCAGAATTCTGCATGGTGACAGTCTCCCCCAAACATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CCA 72 bp AACCTGACAAGGCTCTCGAGGTCCTGTACTCCAGCCTaGCTCATGACCCGCTCATTTTCCGCAATAGCCCGT +
Preference number: 6 (lower is better)
Translates to: NLTRLSRSCTPA*LMTRSFSAIAR
Trigger: ACGGGCTATTGCGGAAAATGAGCGGGTCATGAGCCAGGCTGGAGTACAGGACCTCGAGAGCCTTGTCAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CCA 72 bp AAGGCGGGAGGACTCGCAGGTAGCGGCTGGTCGTGGTaGTGTTCTGCAGCGCAATTACCATCTCATAAACTG +
Preference number: 6 (lower is better)
Translates to: KAGGLAGSGWSW*CSAAQLPSHKL
Trigger: CAGTTTATGAGATGGTAATTGCGCTGCAGAACACCACCACGACCAGCCGCTACCTGCGAGTCCTCCCGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
ENST00000447130.1
ENST00000469151.1
CDS CCA 72 bp CACCAGCAGCTCCACCAGCCGGTCTTCCTTGTCTTCTaGAACATAGGTCTCCCAATCCAGGCGGATGTCACA +
Preference number: 6 (lower is better)
Translates to: HQQLHQPVFLVF*NIGLPIQADVT
Trigger: TGTGACATCCGCCTGGATTGGGAGACCTATGTTCCAGAAGACAAGGAAGACCGGCTGGTGGAGCTGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CCA 72 bp GCACTGGAGCTGCCCTCAACTGATGAGTCAGTTTCATaGCTGAATTCCGATGAACTGGAGGGGCCTGGGGAC +
Preference number: 6 (lower is better)
Translates to: ALELPSTDESVS*LNSDELEGPGD
Trigger: GTCCCCAGGCCCCTCCAGTTCATCGGAATTCAGCCATGAAACTGACTCATCAGTTGAGGGCAGCTCCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CAA 72 bp CTCACTTCGTCGCCGATGACCTCGGCTGAGTACAAGTaGCGGAAGACGCCGGTGAGCAAGTGCGAGATATCT +
Preference number: 6 (lower is better)
Translates to: LTSSPMTSAEYK*RKTPVSKCEIS
Trigger: AGATATCTCGCACTTGCTCACCGGCGTCTTCCGCAACTTGTACTCAGCCGAGGTCATCGGCGACGAAGTGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CAA 72 bp TTGCCCCAGTGGAACTGGGTAGGCAGGAGCGTGCCATaGATAAGTGTGATGGTTGTCTTCGTGGGCACACCC +
Preference number: 6 (lower is better)
Translates to: LPQWNWVGRSVP*ISVMVVFVGTP
Trigger: GGGTGTGCCCACGAAGACAACCATCACACTTATCAATGGCACGCTCCTGCCTACCCAGTTCCACTGGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CAA 72 bp CACAGTGCCCTGAAAACACCACTGCGTTCCAGCAGGTaGTCCTGGAGAAGGCTGGGGCATGGCAGGAATTCT +
Preference number: 6 (lower is better)
Translates to: HSALKTPLRSSR*SWRRLGHGRNS
Trigger: AGAATTCCTGCCATGCCCCAGCCTTCTCCAGGACAACCTGCTGGAACGCAGTGGTGTTTTCAGGGCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440294.6
CDS CAA 90 bp GGCAGGAGGCATGTTGGGAAGGCTGGTCTTTTTGCTCAGGCTGTTTaGGGGGCTCCCGAAATACTCAAACTTGAGGGAGAAACGGGTCCG +
Preference number: 6 (lower is better)
Translates to: GRRHVGKAGLFAQAV*GAPEILKLEGETGP
Trigger: CGGACCCGTTTCTCCCTCAAGTTTGAGTATTTCGGGAGCCCCCAAAACAGCCTGAGCAAAAAGACCAGCCTTCCCAACATGCCTCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000477260.1
CDS CAA 90 bp AGAAGCTGCCCAGACACCAGGCTTCATCCTCAGACTCCTGTTTCATaGAGCTGCCAACCACAGACCCACCTTTCCTGCCCACCCATGATG +
Preference number: 6 (lower is better)
Translates to: RSCPDTRLHPQTPVS*SCQPQTHLSCPPMM
Trigger: CATCATGGGTGGGCAGGAAAGGTGGGTCTGTGGTTGGCAGCTCAATGAAACAGGAGTCTGAGGATGAAGCCTGGTGTCTGGGCAGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS TCA 72 bp TGGAGCTGCCCTCAACTGATGAGTCAGTTTCATGGCTaGATTCCGATGAACTGGAGGGGCCTGGGGACCAGA +
Preference number: 6 (lower is better)
Translates to: WSCPQLMSQFHG*IPMNWRGLGTR
Trigger: TCTGGTCCCCAGGCCCCTCCAGTTCATCGGAATTCAGCCATGAAACTGACTCATCAGTTGAGGGCAGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS TCA 72 bp CAGACACCAGGCTTCATCCTCAGACTCCTGTTTCATTaGGCTGCCAACCACAGACCCACCTTTCCTGCCCAC +
Preference number: 6 (lower is better)
Translates to: QTPGFILRLLFH*AANHRPTFPAH
Trigger: GTGGGCAGGAAAGGTGGGTCTGTGGTTGGCAGCTCAATGAAACAGGAGTCTGAGGATGAAGCCTGGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS GCA 72 bp GCTTCCCAGAAATGCCTAGAACCAGTGGCTTCTTCATaGCTGACACGTGACAAGGGAGGGCCAGATGGGTCA +
Preference number: 6 (lower is better)
Translates to: ASQKCLEPVASS*LTRDKGGPDGS
Trigger: TGACCCATCTGGCCCTCCCTTGTCACGTGTCAGGCATGAAGAAGCCACTGGTTCTAGGCATTTCTGGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 72 bp CTCTCCATAAAATCCAGCTGCTCTCGCTTGGCCAGGTaGTCTTGCATCCGCACTGTCTTTAGCAGGGCAGGA +
Preference number: 6 (lower is better)
Translates to: LSIKSSCSRLAR*SCIRTVFSRAG
Trigger: TCCTGCCCTGCTAAAGACAGTGCGGATGCAAGAGCACCTGGCCAAGCGAGAGCAGCTGGATTTTATGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 72 bp ACCAGGCTTCATCCTCAGACTCCTGTTTCATTGAGCTaGCAACCACAGACCCACCTTTCCTGCCCACCCATG +
Preference number: 6 (lower is better)
Translates to: TRLHPQTPVSLS*QPQTHLSCPPM
Trigger: CATGGGTGGGCAGGAAAGGTGGGTCTGTGGTTGGCAGCTCAATGAAACAGGAGTCTGAGGATGAAGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS CCA 72 bp TGTTTGGGGGAGACTGTCACCATGCAGAATTCTGCTTaGTGTCCGAGGAGCTTGCCCCAGTGGAACTGGGTA +
Preference number: 6 (lower is better)
Translates to: CLGETVTMQNSA*CPRSLPQWNWV
Trigger: TACCCAGTTCCACTGGGGCAAGCTCCTCGGACACCAAGCAGAATTCTGCATGGTGACAGTCTCCCCCAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CCA 72 bp GGAGAAGGGCCTGGAGACCATAAGCCGGAAGTAGTGTaGGATCTCTGTAGTGTTGGTCAGCTTCAGGTGGTG +
Preference number: 6 (lower is better)
Translates to: GEGPGDHKPEVV*DLCSVGQLQVV
Trigger: CACCACCTGAAGCTGACCAACACTACAGAGATCCCACACTACTTCCGGCTTATGGTCTCCAGGCCCTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000478428.1
CDS CAA 72 bp ATGTTTGGGGGAGACTGTCACCATGCAGAATTCTGCTaGGTGTCCGAGGAGCTTGCCCCAGTGGAACTGGGT +
Preference number: 6 (lower is better)
Translates to: MFGGDCHHAEFC*VSEELAPVELG
Trigger: ACCCAGTTCCACTGGGGCAAGCTCCTCGGACACCAAGCAGAATTCTGCATGGTGACAGTCTCCCCCAAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CAA 72 bp CCAGACACCAGGCTTCATCCTCAGACTCCTGTTTCATaGAGCTGCCAACCACAGACCCACCTTTCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: PDTRLHPQTPVS*SCQPQTHLSCP
Trigger: TGGGCAGGAAAGGTGGGTCTGTGGTTGGCAGCTCAATGAAACAGGAGTCTGAGGATGAAGCCTGGTGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS TCA 72 bp CTGGAATCTCCCTTTCCACCTTGCTGTCCAAGCTCATaGAACCCAGGGCGTAGCCAGTACACTCCACCTTGT +
Preference number: 6 (lower is better)
Translates to: LESPFPPCCPSS*NPGRSQYTPPC
Trigger: ACAAGGTGGAGTGTACTGGCTACGCCCTGGGTTTCATGAGCTTGGACAGCAAGGTGGAAAGGGAGATTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS TCA 72 bp TCTGGGACTTCCTCTAGCACCATCTGGAGCACACTGTaGAAATCCCTCAGCTGCAAGGCAAACACAGTGCCC +
Preference number: 6 (lower is better)
Translates to: SGTSSSTIWSTL*KSLSCKANTVP
Trigger: GGGCACTGTGTTTGCCTTGCAGCTGAGGGATTTTCACAGTGTGCTCCAGATGGTGCTAGAGGAAGTCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440294.6
CDS GCA 72 bp GTTTCATTGAGCTGCCAACCACAGACCCACCTTTCCTaGCCACCCATGATGCTGAGAGAGGCCTCAAACTCT +
Preference number: 6 (lower is better)
Translates to: VSLSCQPQTHLS*PPMMLREASNS
Trigger: AGAGTTTGAGGCCTCTCTCAGCATCATGGGTGGGCAGGAAAGGTGGGTCTGTGGTTGGCAGCTCAATGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS CCA 72 bp CTCTCCTTAGAGATGGTAATGGCCACTTGCAGTCCCTaGGGCTTCCCAGAAATGCCTAGAACCAGTGGCTTC +
Preference number: 6 (lower is better)
Translates to: LSLEMVMATCSP*GFPEMPRTSGF
Trigger: GAAGCCACTGGTTCTAGGCATTTCTGGGAAGCCCCAGGGACTGCAAGTGGCCATTACCATCTCTAAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS CCA 72 bp AGGACTTCTCACCGAGCACACCTTCCACCACCATCGTaGACTCGTACAGCTCACTACTCCCATCAGCATAGT +
Preference number: 6 (lower is better)
Translates to: RTSHRAHLPPPS*TRTAHYSHQHS
Trigger: ACTATGCTGATGGGAGTAGTGAGCTGTACGAGTCCACGATGGTGGTGGAAGGTGTGCTCGGTGAGAAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346219.7
ENST00000478428.1
CDS CCA 72 bp CACTGCTCTGTGCTGAAAACACTGTCCTGTGCCCATTaGTACTATGTAACACACCACCCTTGGCCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: HCSVLKTLSCAH*YYVTHHPWPCP
Trigger: TGGGCAGGGCCAAGGGTGGTGTGTTACATAGTACCAATGGGCACAGGACAGTGTTTTCAGCACAGAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477260.1
CDS GCA 72 bp CTGGCTCATGACCCGCTCATTTTCCGCAATAGCCCGTaGTTGGGCCTGAGTGATATGTCTCTCCAACATTTC +
Preference number: 6 (lower is better)
Translates to: LAHDPLIFRNSP*LGLSDMSLQHF
Trigger: GAAATGTTGGAGAGACATATCACTCAGGCCCAAGCACGGGCTATTGCGGAAAATGAGCGGGTCATGAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS GCA 72 bp CAATCAGAGCTCTCCTTAGAGATGGTAATGGCCACTTaGAGTCCCTGGGGCTTCCCAGAAATGCCTAGAACC +
Preference number: 6 (lower is better)
Translates to: QSELSLEMVMAT*SPWGFPEMPRT
Trigger: GGTTCTAGGCATTTCTGGGAAGCCCCAGGGACTGCAAGTGGCCATTACCATCTCTAAGGAGAGCTCTGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308059.11
ENST00000346219.7
CDS GCA 72 bp CACTGTGAAAATCCCTCAGCTGCAAGGCAAACACAGTaGCCTGAAAACACCACTGCGTTCCAGCAGGTTGTC +
Preference number: 6 (lower is better)
Translates to: HCENPSAARQTQ*PENTTAFQQVV
Trigger: GACAACCTGCTGGAACGCAGTGGTGTTTTCAGGGCACTGTGTTTGCCTTGCAGCTGAGGGATTTTCACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440294.6
CDS CAA 72 bp CAGCTCAAACACCGAAGGCAGGATTCCAAAAGGAGGTaGTTCAACAAAGCCGACGGTTGCAATGGCCCAGTC +
Preference number: 6 (lower is better)
Translates to: QLKHRRQDSKRR*FNKADGCNGPV
Trigger: GACTGGGCCATTGCAACCGTCGGCTTTGTTGAACAACCTCCTTTTGGAATCCTGCCTTCGGTGTTTGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447130.1
CDS CAA 90 bp TCCAGCCTGGCTCATGACCCGCTCATTTTCCGCAATAGCCCGTGCTaGGGCCTGAGTGATATGTCTCTCCAACATTTCAAACTCATCCAG +
Preference number: 6 (lower is better)
Translates to: SSLAHDPLIFRNSPC*GLSDMSLQHFKLIQ
Trigger: CTGGATGAGTTTGAAATGTTGGAGAGACATATCACTCAGGCCCAAGCACGGGCTATTGCGGAAAATGAGCGGGTCATGAGCCAGGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CAA 90 bp ATCAGCTGCCCAATTCCTATGGTCACCAGCTCCTTTATCTGGCAGTaGTCGCACATGATGATGAAGGTCTGCTCTGCCTTTCCTAGGCTC +
Preference number: 6 (lower is better)
Translates to: ISCPIPMVTSSFIWQ*SHMMMKVCSAFPRL
Trigger: GAGCCTAGGAAAGGCAGAGCAGACCTTCATCATCATGTGCGACAACTGCCAGATAAAGGAGCTGGTGACCATAGGAATTGGGCAGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS TCA 72 bp ACCCGCTCATTTTCCGCAATAGCCCGTGCTTGGGCCTaGGTGATATGTCTCTCCAACATTTCAAACTCATCC +
Preference number: 6 (lower is better)
Translates to: TRSFSAIARAWA*VICLSNISNSS
Trigger: GGATGAGTTTGAAATGTTGGAGAGACATATCACTCAGGCCCAAGCACGGGCTATTGCGGAAAATGAGCGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CCA 72 bp GGAGTATCAGCACAACTCTGTTCTGGCTCTGTACTCTaGAATTCTCCTATCGGTGCTGGCTTCTTTGGAGGA +
Preference number: 6 (lower is better)
Translates to: GVSAQLCSGSVL*NSPIGAGFFGG
Trigger: TCCTCCAAAGAAGCCAGCACCGATAGGAGAATTCCAGAGTACAGAGCCAGAACAGAGTTGTGCTGATACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CCA 72 bp AGCTGCCCAATTCCTATGGTCACCAGCTCCTTTATCTaGCAGTTGTCGCACATGATGATGAAGGTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: SCPIPMVTSSFI*QLSHMMMKVCS
Trigger: AGAGCAGACCTTCATCATCATGTGCGACAACTGCCAGATAAAGGAGCTGGTGACCATAGGAATTGGGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CAA 72 bp GCTCATGACCCGCTCATTTTCCGCAATAGCCCGTGCTaGGGCCTGAGTGATATGTCTCTCCAACATTTCAAA +
Preference number: 6 (lower is better)
Translates to: AHDPLIFRNSPC*GLSDMSLQHFK
Trigger: TTTGAAATGTTGGAGAGACATATCACTCAGGCCCAAGCACGGGCTATTGCGGAAAATGAGCGGGTCATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CAA 72 bp CAGCTCAAACACCGAAGGCAGGATTCCAAAAGGAGGTaGTTCAACAAAGCCGACGGTTGCAATGGCCTTGAA +
Preference number: 6 (lower is better)
Translates to: QLKHRRQDSKRR*FNKADGCNGLE
Trigger: TTCAAGGCCATTGCAACCGTCGGCTTTGTTGAACAACCTCCTTTTGGAATCCTGCCTTCGGTGTTTGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CAA 72 bp CATGTTGGGAAGGCTGGTCTTTTTGCTCAGGCTGTTTaGGGGGCTCCCGAAATACTCAAACTTGAGGGAGAA +
Preference number: 6 (lower is better)
Translates to: HVGKAGLFAQAV*GAPEILKLEGE
Trigger: TTCTCCCTCAAGTTTGAGTATTTCGGGAGCCCCCAAAACAGCCTGAGCAAAAAGACCAGCCTTCCCAACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000477260.1
CDS CCA 72 bp TTCTGGCTCTGTACTCTGGAATTCTCCTATCGGTGCTaGCTTCTTTGGAGGAAAAACAAGAGACTTGCCTCC +
Preference number: 6 (lower is better)
Translates to: FWLCTLEFSYRC*LLWRKNKRLAS
Trigger: GGAGGCAAGTCTCTTGTTTTTCCTCCAAAGAAGCCAGCACCGATAGGAGAATTCCAGAGTACAGAGCCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CAA 72 bp CCAATTCCTATGGTCACCAGCTCCTTTATCTGGCAGTaGTCGCACATGATGATGAAGGTCTGCTCTGCCTTT +
Preference number: 6 (lower is better)
Translates to: PIPMVTSSFIWQ*SHMMMKVCSAF
Trigger: AAAGGCAGAGCAGACCTTCATCATCATGTGCGACAACTGCCAGATAAAGGAGCTGGTGACCATAGGAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CAA 72 bp CTGTACTCTGGAATTCTCCTATCGGTGCTGGCTTCTTaGGAGGAAAAACAAGAGACTTGCCTCCATATCGAG +
Preference number: 6 (lower is better)
Translates to: LYSGILLSVLAS*EEKQETCLHIE
Trigger: CTCGATATGGAGGCAAGTCTCTTGTTTTTCCTCCAAAGAAGCCAGCACCGATAGGAGAATTCCAGAGTACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CAA 90 bp TCTTCGAACTCAGCAAGCTTCTTCCTGCATGAATCTTCAAGCTTCTaGTTCAGCTCTTTCTTCTGGACGGAACGCTTCTCACAGCTAAAT +
Preference number: 6 (lower is better)
Translates to: SSNSASFFLHESSSF*FSSFFWTERFSQLN
Trigger: ATTTAGCTGTGAGAAGCGTTCCGTCCAGAAGAAAGAGCTGAACAAGAAGCTTGAAGATTCATGCAGGAAGAAGCTTGCTGAGTTCGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS CCA 72 bp TTAGGAGTTAAATTCCATGTCAGGCTGTCCACAGTGTaGTCTAACTCATCTTCGAACTCAGCAAGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: LGVKFHVRLSTV*SNSSSNSASFF
Trigger: GAAGAAGCTTGCTGAGTTCGAAGATGAGTTAGACCACACTGTGGACAGCCTGACATGGAATTTAACTCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6
CDS GCA 72 bp GGTCTAACTCATCTTCGAACTCAGCAAGCTTCTTCCTaGATGAATCTTCAAGCTTCTTGTTCAGCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: GLTHLRTQQASS*MNLQASCSALS
Trigger: AGAAAGAGCTGAACAAGAAGCTTGAAGATTCATGCAGGAAGAAGCTTGCTGAGTTCGAAGATGAGTTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308059.11
ENST00000346219.7
ENST00000440294.6