RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DLC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000164741

Ensembl transcript IDs: ENST00000276297.9, ENST00000316609.9, ENST00000358919.6, ENST00000503161.6, ENST00000506171.1, ENST00000509922.5, ENST00000510250.2, ENST00000510318.5, ENST00000511869.1, ENST00000512044.6, ENST00000513883.5, ENST00000515225.1, ENST00000517333.1, ENST00000517868.2, ENST00000520226.5, ENST00000521730.1, ENST00000529018.1, ENST00000631382.1

Found 981 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATCTCCGTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTaGGTGGCTCAGTTGCAGTTTGGCCTTGGAATGATTTGCAGTCCG +
Preference number: 1 (lower is better)
Translates to: ISVLPEPSPGFPVWE*VAQLQFGLGMICSP
Trigger: CGGACTGCAAATCATTCCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR CCA 90 bp GAGAGAATCTCCGTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTaGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTGGAATGATTTGC +
Preference number: 1 (lower is better)
Translates to: ERISVLPEPSPGFPV*EWVAQLQFGLGMIC
Trigger: GCAAATCATTCCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGATTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR TCA 90 bp TCGTTTCCTAACTGGACCTTTGTTGGAGAGAATCTCCGTGCTTCCTaGACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTT +
Preference number: 1 (lower is better)
Translates to: SFPNWTFVGENLRAS*TFTRVSCLGVGGSV
Trigger: AACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGATTCTCTCCAACAAAGGTCCAGTTAGGAAACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR GCA 90 bp GGAAAGAGAACTTTTGTGGCATTCACTGGTGACCCTGACTCTGCTTaGAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTCTCAGC +
Preference number: 1 (lower is better)
Translates to: GKRTFVAFTGDPDSA*KHLSAVARCRHPLS
Trigger: GCTGAGAGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAGGGTCACCAGTGAATGCCACAAAAGTTCTCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR CCA 90 bp TTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTaGCCTTGGAATGATTTGCAGTCCGATTTTTCCTTCAGCAAATCG +
Preference number: 1 (lower is better)
Translates to: FTRVSCLGVGGSVAV*PWNDLQSDFSFSKS
Trigger: CGATTTGCTGAAGGAAAAATCGGACTGCAAATCATTCCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR GCA 90 bp AGGTGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTaGCATTCAGCCAGCAACAAACACACATTCACACTCCTCTGTGCA +
Preference number: 1 (lower is better)
Translates to: RCLSVPDTESTLDIY*HSASNKHTFTLLCA
Trigger: TGCACAGAGGAGTGTGAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
3UTR CCA 90 bp AGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTaGAATGATTTGCAGTCCGATTTTTCCTTCAGCAAATCGCTCTTT +
Preference number: 1 (lower is better)
Translates to: RVSCLGVGGSVAVWP*NDLQSDFSFSKSLF
Trigger: AAAGAGCGATTTGCTGAAGGAAAAATCGGACTGCAAATCATTCCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR TCA 90 bp GATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACTaGATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACA +
Preference number: 1 (lower is better)
Translates to: DASISFLEVSQCARH*IHLRHLLPFSQQQT
Trigger: TGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
3UTR TCA 90 bp TTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTGGAATaGTTTGCAGTCCGATTTTTCCTTCAGCAAATCGCTCTTTTGATT +
Preference number: 1 (lower is better)
Translates to: FLFGSGWLSCSLALE*FAVRFFLQQIALLI
Trigger: AATCAAAAGAGCGATTTGCTGAAGGAAAAATCGGACTGCAAATCATTCCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR TCA 90 bp ACACATTCACACTCCTCTGTGCAAACCTTTCTTTGCTCATCTTGGTaGGAAAACACATCCAAGAGTACCAACTATTCCAGTGGATACACC +
Preference number: 1 (lower is better)
Translates to: THSHSSVQTFLCSSW*ENTSKSTNYSSGYT
Trigger: GGTGTATCCACTGGAATAGTTGGTACTCTTGGATGTGTTTTCTCACCAAGATGAGCAAAGAAAGGTTTGCACAGAGGAGTGTGAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
3UTR GCA 90 bp AAATGCTATGCTTTGCAATCTGTGGTTTTAAGGGTGGGAGTGAGATaGAATATTAAGGAAGGCAGCCCAGACTTTTCCCTTACTTTAAAC +
Preference number: 1 (lower is better)
Translates to: KCYALQSVVLRVGVR*NIKEGSPDFSLTLN
Trigger: GTTTAAAGTAAGGGAAAAGTCTGGGCTGCCTTCCTTAATATTGCATCTCACTCCCACCCTTAAAACCACAGATTGCAAAGCATAGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR CCA 90 bp AAATTCTTCTCTTGTCAAATTAAACAGTGGGAAAGAGAACTTTTGTaGCATTCACTGGTGACCCTGACTCTGCTTGCAAGCATCTTTCTG +
Preference number: 1 (lower is better)
Translates to: KFFSCQIKQWERELL*HSLVTLTLLASIFL
Trigger: CAGAAAGATGCTTGCAAGCAGAGTCAGGGTCACCAGTGAATGCCACAAAAGTTCTCTTTCCCACTGTTTAATTTGACAAGAGAAGAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR CCA 90 bp AAACTACATCACTATTTGCAATCGGGTCTAAAAATAAACTGCATTTaGAATGGGTGTAAGAGCCAACCTATTACAATCAAAGTACAGAAG +
Preference number: 1 (lower is better)
Translates to: KLHHYLQSGLKINCI*NGCKSQPITIKVQK
Trigger: CTTCTGTACTTTGATTGTAATAGGTTGGCTCTTACACCCATTCCAAATGCAGTTTATTTTTAGACCCGATTGCAAATAGTGATGTAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR-3UTR CCA 90 bp TTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTGGAATGGACAAGGGTGTTaGGCCCCCTTTCTGGGTGGA +
Preference number: 2 (lower is better)
Translates to: FTRVSCLGVGGSVAVWPWNGQGC*APFLGG
Trigger: TCCACCCAGAAAGGGGGCCCAACACCCTTGTCCATT...CCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR CAA 90 bp CATTCACTGGTGACCCTGACTCTGCTTGCAAGCATCTTTCTGCTGTaGCACGTTGTCGTCATCCTCTCAGCGTCGTTTCCTAACTGGACC +
Preference number: 2 (lower is better)
Translates to: HSLVTLTLLASIFLL*HVVVILSASFPNWT
Trigger: GGTCCAGTTAGGAAACGACGCTGAGAGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAGGGTCACCAGTGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR CAA 90 bp ACGTTGTCGTCATCCTCTCAGCGTCGTTTCCTAACTGGACCTTTGTaGGAGAGAATCTCCGTGCTTCCTGAACCTTCACCAGGGTTTCCT +
Preference number: 2 (lower is better)
Translates to: TLSSSSQRRFLTGPL*ERISVLPEPSPGFP
Trigger: AGGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGATTCTCTCCAACAAAGGTCCAGTTAGGAAACGACGCTGAGAGGATGACGACAACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR CAA 90 bp CCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTaGCAGTTTGGCCTTGGAATGATTTGCAGTCCGATTTTTCCTTCA +
Preference number: 2 (lower is better)
Translates to: PEPSPGFPVWEWVAQ*QFGLGMICSPIFPS
Trigger: TGAAGGAAAAATCGGACTGCAAATCATTCCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR-3UTR TCA 90 bp ATCTCCGTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTTCCAGTCAAGGTCTATaGATACAGACCCTCAACAAA +
Preference number: 2 (lower is better)
Translates to: ISVLPEPSPGFPVWEWVASSQGL*IQTLNK
Trigger: TTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGA...AGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR-3UTR TCA 90 bp ATCTCCGTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCTTTGCTCATCTTGGTaGGAAAACACATCCAAGAGT +
Preference number: 2 (lower is better)
Translates to: ISVLPEPSPGFPVWEWVALCSSW*ENTSKS
Trigger: ACTCTTGGATGTGTTTTCTCACCAAGATGAGCAAAG...AGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR-3UTR CCA 90 bp TGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAAACAAACACCATGGTaGTGGAAGCGGTTGCGTTGC +
Preference number: 2 (lower is better)
Translates to: CLSVPDTESTLDIYCHSAKQTPW*WKRLRC
Trigger: GCAACGCAACCGCTTCCACCACCATGGTGTTTGTTT...GGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
3UTR-3UTR CCA 90 bp TTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTGGTACAGAAGAGGTTCGTaGAAAAGGAATATGCTTAAT +
Preference number: 2 (lower is better)
Translates to: FTRVSCLGVGGSVAVWPWYRRGS*KRNMLN
Trigger: ATTAAGCATATTCCTTTTCCACGAACCTCTTCTGTA...CCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR-3UTR CCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCAAACACCATGGTGGTaGAAGCGGTTGCGTTGCTTC +
Preference number: 2 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQQTPWW*KRLRCF
Trigger: GAAGCAACGCAACCGCTTCCACCACCATGGTGTTTG...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
3UTR-3UTR TCA 90 bp CTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTCTCACATTACAGTAAAACCTaGATAAAGACCACCCTTCTA +
Preference number: 2 (lower is better)
Translates to: LTLLASIFLLLHVVVILSHYSKT*IKTTLL
Trigger: TAGAAGGGTGGTCTTTATTCAGGTTTTACTGTAATG...TGAGAGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR-3UTR CCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAAAACAAACACCATGGTaGTGGAAGCGGTTGCGTTGC +
Preference number: 2 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKKQTPW*WKRLRC
Trigger: GCAACGCAACCGCTTCCACCACCATGGTGTTTGTTT...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
3UTR-3UTR CCA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTCAAACACCATGGTGGTaGAAGCGGTTGCGTTGCTTC +
Preference number: 2 (lower is better)
Translates to: DTGTHTLISQENEVSSLSQTPWW*KRLRCF
Trigger: GAAGCAACGCAACCGCTTCCACCACCATGGTGTTTG...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
3UTR-3UTR TCA 90 bp GAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCACATCCAGTCAAGGTCTATaGATACAGACCCTCAACAAA +
Preference number: 2 (lower is better)
Translates to: ESTLDIYCHSASNKHTFTSSQGL*IQTLNK
Trigger: TTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGA...TGTGAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
3UTR CAA 90 bp TTCAAATTCTTCTCTTGTCAAATTAAACAGTGGGAAAGAGAACTTTaGTGGCATTCACTGGTGACCCTGACTCTGCTTGCAAGCATCTTT +
Preference number: 2 (lower is better)
Translates to: FKFFSCQIKQWEREL*WHSLVTLTLLASIF
Trigger: AAAGATGCTTGCAAGCAGAGTCAGGGTCACCAGTGAATGCCACAAAAGTTCTCTTTCCCACTGTTTAATTTGACAAGAGAAGAATTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR-3UTR TCA 90 bp TGTGATGGCGCTCTAAGTGACCTCAGCAGAGTTCTTGAAAATGTTCATATCCTTCCATGTATATCTTCATaGGGAACACTGATATCCAAA +
Preference number: 2 (lower is better)
Translates to: CDGALSDLSRVLENVHILPCISS*GTLISK
Trigger: TTTGGATATCAGTGTTCCTCATGAAGATATACATGG...AAGGATATGAACATTTTCAAGAACTCTGCTGAGGTCACTTAGAGCGCCATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR-3UTR CCA 90 bp TGTGATGGCGCTCTAAGTGACCTCAGCAGAGTTCTTGAAAATGTTCATATCCTTAAAATAAACTGCATTTaGAATGGGTGTAAGAGCCAA +
Preference number: 2 (lower is better)
Translates to: CDGALSDLSRVLENVHILKINCI*NGCKSQ
Trigger: TTGGCTCTTACACCCATTCCAAATGCAGTTTATTTT...AAGGATATGAACATTTTCAAGAACTCTGCTGAGGTCACTTAGAGCGCCATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR-3UTR CAA 90 bp TTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTGGCACCTTAGACATCTATaGCCATTCAGCCAGCAACAA +
Preference number: 3 (lower is better)
Translates to: FTRVSCLGVGGSVAVWPWHLRHL*PFSQQQ
Trigger: TTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTG...CCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR TCA 72 bp AACTGGACCTTTGTTGGAGAGAATCTCCGTGCTTCCTaGACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGT +
Preference number: 3 (lower is better)
Translates to: NWTFVGENLRAS*TFTRVSCLGVG
Trigger: ACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGATTCTCTCCAACAAAGGTCCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR CCA 72 bp CTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTaGGTGGCTCAGTTGCAGTTTGGCCTTGGAATGATT +
Preference number: 3 (lower is better)
Translates to: LPEPSPGFPVWE*VAQLQFGLGMI
Trigger: AATCATTCCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR TCA 72 bp GGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTGGAATaGTTTGCAGTCCGATTTTTCCTTCAGCAAATCGCT +
Preference number: 3 (lower is better)
Translates to: GSGWLSCSLALE*FAVRFFLQQIA
Trigger: AGCGATTTGCTGAAGGAAAAATCGGACTGCAAATCATTCCAAGGCCAAACTGCAACTGAGCCACCCACTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR-3UTR CAA 90 bp GTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGTGTGCAAACCTTTCTTaGCTCATCTTGGTGAGAAAA +
Preference number: 3 (lower is better)
Translates to: VLPEPSPGFPVWEWVAQLCANLS*LILVRK
Trigger: TTTTCTCACCAAGATGAGCAAAGAAAGGTTTGCACA...CAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR CCA 72 bp GTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTaGCCTTGGAATGATTTGCAGTCCGATTTTTCCTTC +
Preference number: 3 (lower is better)
Translates to: VSCLGVGGSVAV*PWNDLQSDFSF
Trigger: GAAGGAAAAATCGGACTGCAAATCATTCCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR-3UTR CAA 90 bp TTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTGGGGGTTGGTTTTCTTCTaGTTGCGTTTTACTATGATT +
Preference number: 3 (lower is better)
Translates to: FTRVSCLGVGGSVAVWPWGLVFF*LRFTMI
Trigger: AATCATAGTAAAACGCAACAAGAAGAAAACCAACCC...CCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR CCA 72 bp TGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTaGAATGATTTGCAGTCCGATTTTTCCTTCAGCAAA +
Preference number: 3 (lower is better)
Translates to: CLGVGGSVAVWP*NDLQSDFSFSK
Trigger: TTTGCTGAAGGAAAAATCGGACTGCAAATCATTCCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR GCA 72 bp AGTGTGCCAGACACTGAATCCACCTTAGACATCTATTaGCATTCAGCCAGCAACAAACACACATTCACACTC +
Preference number: 3 (lower is better)
Translates to: SVPDTESTLDIY*HSASNKHTFTL
Trigger: GAGTGTGAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
3UTR GCA 72 bp TGGGTGGCTCAGTTGCAGTTTGGCCTTGGAATGATTTaGAGTCCGATTTTTCCTTCAGCAAATCGCTCTTTT +
Preference number: 3 (lower is better)
Translates to: WVAQLQFGLGMI*SPIFPSANRSF
Trigger: AAAAGAGCGATTTGCTGAAGGAAAAATCGGACTGCAAATCATTCCAAGGCCAAACTGCAACTGAGCCACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR-3UTR CAA 90 bp TGTGATGGCGCTCTAAGTGACCTCAGCAGAGTTCTTGAAAATGTTCATATCCTTCTAAAATGCTATGCTTaGCAATCTGTGGTTTTAAGG +
Preference number: 3 (lower is better)
Translates to: CDGALSDLSRVLENVHILLKCYA*QSVVLR
Trigger: CCTTAAAACCACAGATTGCAAAGCATAGCATTTTAG...AAGGATATGAACATTTTCAAGAACTCTGCTGAGGTCACTTAGAGCGCCATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR TCA 72 bp TTTTTGCACAGTCTTACATATTCCAGTCAAGGTCTATaGATACAGACCCTCAACAAACAGGAAGCAGCTTTA +
Preference number: 3 (lower is better)
Translates to: FLHSLTYSSQGL*IQTLNKQEAAL
Trigger: TAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTGTGCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
3UTR TCA 72 bp CACACTGCAAATAAAGCGACACAGGTACGCATACACTaGTATCACAAGAGAATGAAGTATCTTCATTATCTT +
Preference number: 3 (lower is better)
Translates to: HTANKATQVRIH*YHKRMKYLHYL
Trigger: AAGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp TTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTGGTGGCAGCATCCTCGCTaGGGGGCGCGTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: FTRVSCLGVGGSVAVWPWWQHPR*GARGWG
Trigger: TCCCCAGCCACGCGCCCCCCAGCGAGGATGCTGCCA...CCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp TTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTGGCCGACTGGCTGCTGCTaGTGCTGGTCTGCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: FTRVSCLGVGGSVAVWPWPTGCC*CWSAWS
Trigger: ACTCCACGCAGACCAGCAGCAGCAGCAGCCAGTCGG...CCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp GTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGTCTCCGACTGGCTGCTaGTGCTGCTGGTCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: VLPEPSPGFPVWEWVAQLSPTGC*CCWSAW
Trigger: CCACGCAGACCAGCAGCAGCAGCAGCCAGTCGGAGA...CAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGGCCGGCATTGCGGCTaGCACTGCGGCCCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCGRHCG*HCGPGK
Trigger: CTTCCCGGGGCCGCAGTGCCAGCCGCAATGCCGGCC...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512044.6
CDS-3UTR GCA 90 bp TTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTGGACCCAGGTGCCCGAGTaGTTCCAGAGTGAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: FTRVSCLGVGGSVAVWPWTQVPE*FQSEGL
Trigger: AAGCCCCTCACTCTGGAAGCACTCGGGCACCTGGGT...CCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp ACTGAACCTGATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACCGGGTGGGAGTCGTCTaGGGACCCAGGGACCAGGTC +
Preference number: 4 (lower is better)
Translates to: TEPDASISFLEVSQCARHRVGVV*GPRDQV
Trigger: GACCTGGTCCCTGGGTCCCCAGACGACTCCCACCCG...GTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATCAGGTTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp TGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCTGGCAGCATCCTCGCTaGGGGGCGCGTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: CLSVPDTESTLDIYCHSAWQHPR*GARGWG
Trigger: TCCCCAGCCACGCGCCCCCCAGCGAGGATGCTGCCA...GGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGGCAGCATCCTCGCTaGGGGGCGCGTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQWQHPR*GARGWG
Trigger: TCCCCAGCCACGCGCCCCCCAGCGAGGATGCTGCCA...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ATCTCCGTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTAGCTGGACAGTTCCTTaGGAGAGGGCAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: ISVLPEPSPGFPVWEWVASWTVP*ERAGCR
Trigger: TCGGCAGCCTGCCCTCTCCCAAGGAACTGTCCAGCT...AGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGCCTCCTGGCGCTCGCTaGGGTCCATCAGCGTGCCTC +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQPPGAR*GPSACL
Trigger: GAGGCACGCTGATGGACCTCAGCGAGCGCCAGGAGG...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGGAGGCTTGGCCGATGTaGGCTCTGGAAACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: VLPEPSPGFPVWEWVAQLEAWPM*ALETVP
Trigger: TGGCACAGTTTCCAGAGCTCACATCGGCCAAGCCTC...CAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp TTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTGGCTGCTGCTGCTGGTCTaGGTGGAGTTGGAAACGCTC +
Preference number: 4 (lower is better)
Translates to: FTRVSCLGVGGSVAVWPWLLLLV*VELETL
Trigger: GAGCGTTTCCAACTCCACGCAGACCAGCAGCAGCAG...CCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCCGGGTGGGAGTCGTCTaGGGACCCAGGGACCAGGTC +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCRVGVV*GPRDQV
Trigger: GACCTGGTCCCTGGGTCCCCAGACGACTCCCACCCG...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGGGCCGTCCTTCGGGTaGGAGTCGTCTGGGGACCCA +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCGPSFG*ESSGDP
Trigger: TGGGTCCCCAGACGACTCCCACCCGAAGGACGGCCC...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGCCATCACGTGGGCCTTaGGGTCCCCCATCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQPSRGP*GPPSAR
Trigger: GCGAGCGGATGGGGGACCCCAAGGCCCACGTGATGG...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512044.6
CDS-3UTR TCA 90 bp CCAACTATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACCTCCTGGCGCTCGCTaGGGTCCATCAGCGTGCCTC +
Preference number: 4 (lower is better)
Translates to: PTIPVDTPVPQHTANKATPPGAR*GPSACL
Trigger: GAGGCACGCTGATGGACCTCAGCGAGCGCCAGGAGG...TGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAATAGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGGGCTGCCAGTGCTGCTaGGGCTGCGGACGGAAGACA +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQGCQCC*GCGRKT
Trigger: TGTCTTCCGTCCGCAGCCTCAGCAGCACTGGCAGCC...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTGGCTGCCAGTGCTGCTaGGGCTGCGGACGGAAGACA +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAGCQCC*GCGRKT
Trigger: TGTCTTCCGTCCGCAGCCTCAGCAGCACTGGCAGCC...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp CTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTCTCACTGTGCGCTGCACGTTaGCCGTCAGTGGGACCCCAA +
Preference number: 4 (lower is better)
Translates to: LTLLASIFLLLHVVVILSLCAAR*PSVGPQ
Trigger: TTGGGGTCCCACTGACGGTCAACGTGCAGCGCACAG...TGAGAGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp ACTGAACCTGATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACTCTCCGACTGGCTGCTaGTGCTGCTGGTCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: TEPDASISFLEVSQCARHSPTGC*CCWSAW
Trigger: CCACGCAGACCAGCAGCAGCAGCAGCCAGTCGGAGA...GTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATCAGGTTCAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGGCAGCCTTGATGGCCTaGAGGCGCTGGTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQAALMA*RRWSLG
Trigger: GCCCAAGGACCAGCGCCTGCAGGCCATCAAGGCTGC...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ACTGAACCTGATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACTCCTCAACGCATCCTTaGTCGCCGCTCCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: TEPDASISFLEVSQCARHSSTHP*SPLPAP
Trigger: AGGGGCAGGGAGCGGCGAGCAAGGATGCGTTGAGGA...GTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATCAGGTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358919.6
CDS-3UTR CCA 90 bp ATCTCCGTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGCTGACATTCCATTaGGGCAGGAAGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: ISVLPEPSPGFPVWEWVAQLTFH*GRKEAA
Trigger: TGCAGCCTCCTTCCTGCCCCAATGGAATGTCAGCTG...AGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGGGGCCGTCCTTCGGGTaGGAGTCGTCTGGGGACCCA +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVGPSFG*ESSGDP
Trigger: TGGGTCCCCAGACGACTCCCACCCGAAGGACGGCCC...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCCTCCTCCCCGCTGTCTaGGTCGCAGGCCTTAGCGAC +
Preference number: 4 (lower is better)
Translates to: CLSVPDTESTLDIYCHSALLPAV*VAGLSD
Trigger: GTCGCTAAGGCCTGCGACCCAGACAGCGGGGAGGAG...GGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358919.6
CDS-3UTR TCA 90 bp TTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTGGGAGAGGAGCTGGTGCTaGGGGCATTTTCTATGTCCT +
Preference number: 4 (lower is better)
Translates to: FTRVSCLGVGGSVAVWPWERSWC*GHFLCP
Trigger: AGGACATAGAAAATGCCCTCAGCACCAGCTCCTCTC...CCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGGCAGCCTTGATGGCCTaGAGGCGCTGGTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVAALMA*RRWSLG
Trigger: GCCCAAGGACCAGCGCCTGCAGGCCATCAAGGCTGC...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCTTGCTCGCCGCTCCCTaGCCCTCGTCACGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TESTLDIYCHSASNKHTFLLAAP*PSSRPQ
Trigger: CTGGGGCCGTGACGAGGGGCAGGGAGCGGCGAGCAA...GAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358919.6
CDS-3UTR CCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAACGGGTGGGAGTCGTCTaGGGACCCAGGGACCAGGTC +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVERVGVV*GPRDQV
Trigger: GACCTGGTCCCTGGGTCCCCAGACGACTCCCACCCG...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGGGCCGTCCTTCGGGTaGGAGTCGTCTGGGGACCCA +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVEGPSFG*ESSGDP
Trigger: TGGGTCCCCAGACGACTCCCACCCGAAGGACGGCCC...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ACTGAACCTGATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACACGGAAGACACCTCCTaGCGCTCGCTGAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: TEPDASISFLEVSQCARHTEDTS*RSLRSI
Trigger: GATGGACCTCAGCGAGCGCCAGGAGGTGTCTTCCGT...GTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATCAGGTTCAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACATGTGGCCAGGGCCGTaGAAGCTTCCCGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DTPVPQHTANKATQVRIHMWPGP*KLPVLQ
Trigger: CTGGAGGACGGGAAGCTTCCACGGCCCTGGCCACAT...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGATGTGGCCAGGGCCGTaGAAGCTTCCCGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQMWPGP*KLPVLQ
Trigger: CTGGAGGACGGGAAGCTTCCACGGCCCTGGCCACAT...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGGTGTATCTGTTTTaGAGAGGACGGGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: VLPEPSPGFPVWEWVAQLQVYLF*RGRAGR
Trigger: TCTCCCTGCCCGTCCTCTCCAAAACAGATACACCTG...CAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp ATCTCCGTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTGGCCGATGTGAGCTCTaGAAACTGTGCCATCTCAGT +
Preference number: 4 (lower is better)
Translates to: ISVLPEPSPGFPVWEWVAGRCEL*KLCHLS
Trigger: ACTGAGATGGCACAGTTTCCAGAGCTCACATCGGCC...AGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp ATCTCCGTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTAAGTCCATTTGCCACTaGTGGCACAAGGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: ISVLPEPSPGFPVWEWVAKSICH*WHKAHP
Trigger: AGGATGAGCCTTGTGCCATCAGTGGCAAATGGACTT...AGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGGACCGAGTCCAGGGCTaGGTCCGAATCTCCCTCATC +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQDRVQG*VRISLI
Trigger: GATGAGGGAGATTCGGACTCAGCCCTGGACTCGGTC...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGACCGAGTCCAGGGCTaGGTCCGAATCTCCCTCATC +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCDRVQG*VRISLI
Trigger: GATGAGGGAGATTCGGACTCAGCCCTGGACTCGGTC...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGCCTGCTGGATGCTCTaGGGCAACGGTTGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCACWML*GNGCPV
Trigger: CACAGGACAACCGTTGCCTCAGAGCATCCAGCAGGC...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTGCCTGCTGGATGCTCTaGGGCAACGGTTGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAACWML*GNGCPV
Trigger: CACAGGACAACCGTTGCCTCAGAGCATCCAGCAGGC...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp TGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCTCAGGGAGTTGCCTGTaGTGTCCAGGTCGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: CLSVPDTESTLDIYCHSASGSCL*CPGRWV
Trigger: CACCCAGCGACCTGGACAGCACAGGCAACTCCCTGA...GGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTCAGGGAGTTGCCTGTaGTGTCCAGGTCGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQSGSCL*CPGRWV
Trigger: CACCCAGCGACCTGGACAGCACAGGCAACTCCCTGA...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp GTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCTGCTTCAGCATGTCTaGCACGTCATAAGCAGACTG +
Preference number: 4 (lower is better)
Translates to: VLPEPSPGFPVWEWVAQLLLQHV*HVISRL
Trigger: CAGTCTGCTTATGACGTGGCAGACATGCTGAAGCAG...CAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp GAGAAAACACATCCAAGAGTACCAACTATTCCAGTGGATACACCAGTCCCTCAAGCAGCCTTGATGGCCTaGAGGCGCTGGTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: EKTHPRVPTIPVDTPVPQAALMA*RRWSLG
Trigger: GCCCAAGGACCAGCGCCTGCAGGCCATCAAGGCTGC...TTGAGGGACTGGTGTATCCACTGGAATAGTTGGTACTCTTGGATGTGTTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTACCCAGGTGCCCGAGTaGTTCCAGAGTGAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVATQVPE*FQSEGL
Trigger: AAGCCCCTCACTCTGGAAGCACTCGGGCACCTGGGT...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCACCCAGGTGCCCGAGTaGTTCCAGAGTGAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCTQVPE*FQSEGL
Trigger: AAGCCCCTCACTCTGGAAGCACTCGGGCACCTGGGT...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ACTGAACCTGATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACCACACCCACCACAGGTaGGCGATCGTGATCCACAGA +
Preference number: 4 (lower is better)
Translates to: TEPDASISFLEVSQCARHHTHHR*AIVIHR
Trigger: TCTGTGGATCACGATCGCGCACCTGTGGTGGGTGTG...GTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATCAGGTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGATCAGGAGGCCGGCATTaGGGCTGGCACTGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGSGGRH*GWHCGP
Trigger: GGGGCCGCAGTGCCAGCCGCAATGCCGGCCTCCTGA...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512044.6
CDS-3UTR CCA 90 bp TTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTGGAAGATGGGAGGTCCGTaGACTCAGTGTCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: FTRVSCLGVGGSVAVWPWKMGGP*TQCQKT
Trigger: TGTCTTCTGACACTGAGTCCACGGACCTCCCATCTT...CCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACACGGAAGACACCTCCTaGCGCTCGCTGAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: DTPVPQHTANKATQVRIHTEDTS*RSLRSI
Trigger: GATGGACCTCAGCGAGCGCCAGGAGGTGTCTTCCGT...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGACGGAAGACACCTCCTaGCGCTCGCTGAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQTEDTS*RSLRSI
Trigger: GATGGACCTCAGCGAGCGCCAGGAGGTGTCTTCCGT...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAATGGCAGCATCCTCGCTaGGGGGCGCGTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKWQHPR*GARGWG
Trigger: TCCCCAGCCACGCGCCCCCCAGCGAGGATGCTGCCA...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTAGCTGGACAGTTCCTTaGGAGAGGGCAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVASWTVP*ERAGCR
Trigger: TCGGCAGCCTGCCCTCTCCCAAGGAACTGTCCAGCT...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACTGCTGGTCTCCGACTaGCTGCTGCTGCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: IPVDTPVPQHTANKATQVLLVSD*LLLLLV
Trigger: GACCAGCAGCAGCAGCAGCCAGTCGGAGACCAGCAG...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTGGTGCCTGTTGGACCTaGTTAGGGAAGCCCCAACCC +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAGACWT*LGKPQP
Trigger: GGGTTGGGGCTTCCCTAACCAGGTCCAACAGGCACC...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp CTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTCTCATCAGTCGGTGCCTGTTaGACCTGGTTAGGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: LTLLASIFLLLHVVVILSSVGAC*TWLGKP
Trigger: GGGCTTCCCTAACCAGGTCCAACAGGCACCGACTGA...TGAGAGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp GAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCACACGGCCATGTCCTGGCTaGGAGCGAAGCGCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: ESTLDIYCHSASNKHTFTRPCPG*ERSALA
Trigger: AGCGAGGGCGCTTCGCTCCCAGCCAGGACATGGCCG...TGTGAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358919.6
CDS-3UTR CCA 90 bp ACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCGGTGCGGCCATGTCCTaGCTGGGAGCGAAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: TESTLDIYCHSASNKHTFGAAMS*LGAKRP
Trigger: AGGGCGCTTCGCTCCCAGCCAGGACATGGCCGCACC...GAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358919.6
CDS-3UTR CCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAGGGCGCGCCATCACGTaGGCCTTGGGGTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGGRAIT*ALGSPI
Trigger: GATGGGGGACCCCAAGGCCCACGTGATGGCGCGCCC...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512044.6
3UTR CAA 72 bp GTGACCCTGACTCTGCTTGCAAGCATCTTTCTGCTGTaGCACGTTGTCGTCATCCTCTCAGCGTCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: VTLTLLASIFLL*HVVVILSASFP
Trigger: AGGAAACGACGCTGAGAGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAGGGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAACCTCCTGGCGCTCGCTaGGGTCCATCAGCGTGCCTC +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKPPGAR*GPSACL
Trigger: GAGGCACGCTGATGGACCTCAGCGAGCGCCAGGAGG...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCGGCTGCCAGTGCTGCTaGGGCTGCGGACGGAAGACA +
Preference number: 4 (lower is better)
Translates to: TESTLDIYCHSASNKHTFGCQCC*GCGRKT
Trigger: TGTCTTCCGTCCGCAGCCTCAGCAGCACTGGCAGCC...GAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCATCCGCCAGGTCCCCTaGACTGGAGTAGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCIRQVP*TGVEDG
Trigger: TCCATCCTCTACTCCAGTTCAGGGGACCTGGCGGAT...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGGCCTGCTGGATGCTCTaGGGCAACGGTTGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVACWML*GNGCPV
Trigger: CACAGGACAACCGTTGCCTCAGAGCATCCAGCAGGC...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GACCCTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTATATGGGCCAGCCCTTaGGTGGCAGCTAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: DPDSACKHLSAVARCRHPIWASP*VAARFS
Trigger: TGAAAACCTAGCTGCCACTCAAGGGCTGGCCCATAT...AGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTGCCGGGACCACCTCTTaGTGTCCCTTTGGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAAGTTS*CPFGKS
Trigger: GGACTTTCCAAAGGGACAGCAAGAGGTGGTCCCGGC...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ACTGAACCTGATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACTCCGTTTCAGCAGACTaGGCGTCTTGGACTTGGCAG +
Preference number: 4 (lower is better)
Translates to: TEPDASISFLEVSQCARHSVSAD*ASWTWQ
Trigger: CTGCCAAGTCCAAGACGCGCAGTCTGCTGAAACGGA...GTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATCAGGTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGCTGCTGCTGCTGGTCTaGGTGGAGTTGGAAACGCTC +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQLLLLV*VELETL
Trigger: GAGCGTTTCCAACTCCACGCAGACCAGCAGCAGCAG...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAATCTCCGACTGGCTGCTaGTGCTGCTGGTCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVESPTGC*CCWSAW
Trigger: CCACGCAGACCAGCAGCAGCAGCAGCCAGTCGGAGA...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTAGGTTGTCCTGTGCGCTaGACGTTGACCGTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: IPVDTPVPQHTANKATQVGCPVR*TLTVSG
Trigger: CCCACTGACGGTCAACGTGCAGCGCACAGGACAACC...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGCATGGCCTGCTGGATaGTCTGAGGCAACGGTTGTC +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCAWPAG*SEATVV
Trigger: GACAACCGTTGCCTCAGAGCATCCAGCAGGCCATGC...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGGCATGGCCTGCTGGATaGTCTGAGGCAACGGTTGTC +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQAWPAG*SEATVV
Trigger: GACAACCGTTGCCTCAGAGCATCCAGCAGGCCATGC...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp TTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTGGGCATCTTTCTGCTGTTaGACGTTGTCGTCATCCTCT +
Preference number: 4 (lower is better)
Translates to: FTRVSCLGVGGSVAVWPWASFCC*TLSSSS
Trigger: AGAGGATGACGACAACGTGCAACAGCAGAAAGATGC...CCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCATTGCGGCTGGCACTaGGGCCCCGGGAAGCGCCAA +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQHCGWH*GPGKRQ
Trigger: TTGGCGCTTCCCGGGGCCGCAGTGCCAGCCGCAATG...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512044.6
CDS-3UTR CCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGACGGGTGGGAGTCGTCTaGGGACCCAGGGACCAGGTC +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGRVGVV*GPRDQV
Trigger: GACCTGGTCCCTGGGTCCCCAGACGACTCCCACCCG...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGGCTGCTGCTGCTGCTaGTCTGCGTGGAGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCGCCCC*SAWSWK
Trigger: TTTCCAACTCCACGCAGACCAGCAGCAGCAGCAGCC...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GAGAAAACACATCCAAGAGTACCAACTATTCCAGTGGATACACCAGTCCCTCAACTGCTGGTCTCCGACTaGCTGCTGCTGCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: EKTHPRVPTIPVDTPVPQLLVSD*LLLLLV
Trigger: GACCAGCAGCAGCAGCAGCCAGTCGGAGACCAGCAG...TTGAGGGACTGGTGTATCCACTGGAATAGTTGGTACTCTTGGATGTGTTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp ACTGAACCTGATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACTCAGGCGGCTGCTCATaGAGCTGGAAGAATTGCGTC +
Preference number: 4 (lower is better)
Translates to: TEPDASISFLEVSQCARHSGGCS*SWKNCV
Trigger: GACGCAATTCTTCCAGCTCCATGAGCAGCCGCCTGA...GTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATCAGGTTCAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACCAGGTCCCCTGAACTaGAGTAGAGGATGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: IPVDTPVPQHTANKATQVPGPLN*SRGWSP
Trigger: CGGGCTCCATCCTCTACTCCAGTTCAGGGGACCTGG...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGCCAGGTCCCCTGAACTaGAGTAGAGGATGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVPGPLN*SRGWSP
Trigger: CGGGCTCCATCCTCTACTCCAGTTCAGGGGACCTGG...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGCCAGGTCGCTGGGTGTaGTTCGGTCGTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQPGRWV*FGRCPH
Trigger: ATGTGGACAACGACCGAACCACACCCAGCGACCTGG...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGGGTGCCTGTTGGACCTaGTTAGGGAAGCCCCAACCC +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVGACWT*LGKPQP
Trigger: GGGTTGGGGCTTCCCTAACCAGGTCCAACAGGCACC...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCTCAGTCGGTGCCTGTTaGACCTGGTTAGGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: CLSVPDTESTLDIYCHSASVGAC*TWLGKP
Trigger: GGGCTTCCCTAACCAGGTCCAACAGGCACCGACTGA...GGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTCCGGAGGTATCGCATaGCCTGCTGGATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQSGGIA*PAGCSE
Trigger: CTCAGAGCATCCAGCAGGCCATGCGATACCTCCGGA...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCCGGAGGTATCGCATaGCCTGCTGGATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVASGGIA*PAGCSE
Trigger: CTCAGAGCATCCAGCAGGCCATGCGATACCTCCGGA...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGATGGCCTGCAGGCGCTaGTCCTTGGGCACATATTGG +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQMACRR*SLGTYW
Trigger: CCAATATGTGCCCAAGGACCAGCGCCTGCAGGCCAT...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTGGTACCATTCTGGCATGTaGCCCCTTAAGTCAACTCTG +
Preference number: 4 (lower is better)
Translates to: FTRVSCLGVGGSVAVWPWYHSGM*PLKSTL
Trigger: CAGAGTTGACTTAAGGGGCCACATGCCAGAATGGTA...CCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACGCGGCGGAAGCGCTGTaGGGAAGTCGAGGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHAAEAL*GSRGRR
Trigger: CCGCCTGCCTCGACTTCCCCACAGCGCTTCCGCCGC...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358919.6
CDS-3UTR TCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCCTCCTGGCGCTCGCTaGGGTCCATCAGCGTGCCTC +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHPPGAR*GPSACL
Trigger: GAGGCACGCTGATGGACCTCAGCGAGCGCCAGGAGG...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAGGCTGCCAGTGCTGCTaGGGCTGCGGACGGAAGACA +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKGCQCC*GCGRKT
Trigger: TGTCTTCCGTCCGCAGCCTCAGCAGCACTGGCAGCC...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACGATCAACCCCAGCTTTaGGGGCGCTTTGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: DTPVPQHTANKATQVRIHDQPQL*GRFVLA
Trigger: AGCAAGCACAAAGCGCCCTCAAAGCTGGGGTTGATC...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp TGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCGATCAACCCCAGCTTTaGGGGCGCTTTGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: CLSVPDTESTLDIYCHSADQPQL*GRFVLA
Trigger: AGCAAGCACAAAGCGCCCTCAAAGCTGGGGTTGATC...GGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGATCCGCCAGGTCCCCTaGACTGGAGTAGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVIRQVP*TGVEDG
Trigger: TCCATCCTCTACTCCAGTTCAGGGGACCTGGCGGAT...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCTCCGACCACTGATTaGCTATCCGCTGCATCCCCT +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVASPTTD*LSAASP
Trigger: AGGGGATGCAGCGGATAGTCAATCAGTGGTCGGAGA...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCATCTGGCGCAGAGCCTaGATCCGGGACTTGACCCCC +
Preference number: 4 (lower is better)
Translates to: TESTLDIYCHSASNKHTFIWRRA*IRDLTP
Trigger: GGGGGTCAAGTCCCGGATTCAGGCTCTGCGCCAGAT...GAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCCGAGTGCTTCCAGAGTaGGGGGCTTCAGCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCRVLPE*GASALV
Trigger: AACAAGAGCTGAAGCCCCTCACTCTGGAAGCACTCG...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTCGAGTGCTTCCAGAGTaGGGGGCTTCAGCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVARVLPE*GASALV
Trigger: AACAAGAGCTGAAGCCCCTCACTCTGGAAGCACTCG...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp CTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTCTCAAGGGACTTCAATGACTaGCCTCCAAAGCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LTLLASIFLLLHVVVILSRDFND*PPKPQR
Trigger: CCTCTGAGGCTTTGGAGGTCAGTCATTGAAGTCCCT...TGAGAGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp ACTGAACCTGATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACAGAGTCGTCATTGCCTaGCAAGTTGCTGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: TEPDASISFLEVSQCARHRVVIA*QVAGGA
Trigger: TGCTCCTCCAGCAACTTGGCAGGCAATGACGACTCT...GTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATCAGGTTCAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGTGGGAGAGGGCAGGCTaGCGAAAGAGTCGTCATTGC +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVWERAG*RKSRHC
Trigger: GCAATGACGACTCTTTCGGCAGCCTGCCCTCTCCCA...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp TGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCTCATCCATCCCCTCTTaGAAGATGGGCCCGCTGATG +
Preference number: 4 (lower is better)
Translates to: CLSVPDTESTLDIYCHSASSIPS*KMGPLM
Trigger: CATCAGCGGGCCCATCTTGCAAGAGGGGATGGATGA...GGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCTCATCCATCCCCTCTTaGAAGATGGGCCCGCTGATG +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCSSIPS*KMGPLM
Trigger: CATCAGCGGGCCCATCTTGCAAGAGGGGATGGATGA...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGGCACGTTGTCGTAGATaGTCAGGCGGCTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVARCRR*SGGCSW
Trigger: CCATGAGCAGCCGCCTGAGCATCTACGACAACGTGC...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAATCAGGGAGTTGCCTGTaGTGTCCAGGTCGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVESGSCL*CPGRWV
Trigger: CACCCAGCGACCTGGACAGCACAGGCAACTCCCTGA...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp TGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCGTTCATTCAGGGAGTTaGCTGTGCTGTCCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: CLSVPDTESTLDIYCHSAVHSGS*LCCPGR
Trigger: GCGACCTGGACAGCACAGGCAACTCCCTGAATGAAC...GGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTCATTCAGGGAGTTaGCTGTGCTGTCCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCVHSGS*LCCPGR
Trigger: GCGACCTGGACAGCACAGGCAACTCCCTGAATGAAC...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACGAGCTCTGGAAACTGTaGCATCTCAGTCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: DTPVPQHTANKATQVRIHELWKL*HLSRCL
Trigger: CAGGCACCGACTGAGATGGCACAGTTTCCAGAGCTC...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGGTTGTCCTGTGCGCTaGACGTTGACCGTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVEGCPVR*TLTVSG
Trigger: CCCACTGACGGTCAACGTGCAGCGCACAGGACAACC...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGGCATGGCCTGCTGGATaGTCTGAGGCAACGGTTGTC +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVAWPAG*SEATVV
Trigger: GACAACCGTTGCCTCAGAGCATCCAGCAGGCCATGC...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCGCAGCCTTGATGGCCTaGAGGCGCTGGTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPAALMA*RRWSLG
Trigger: GCCCAAGGACCAGCGCCTGCAGGCCATCAAGGCTGC...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ATCTCCGTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTTCGAGCAGGATGAGGTaGCATACTGTTTTGGACATA +
Preference number: 4 (lower is better)
Translates to: ISVLPEPSPGFPVWEWVASSRMR*HTVLDI
Trigger: TATGTCCAAAACAGTATGGCACCTCATCCTGCTCGA...AGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGCACACCCACCACAGGTaGGCGATCGTGATCCACAGA +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVHTHHR*AIVIHR
Trigger: TCTGTGGATCACGATCGCGCACCTGTGGTGGGTGTG...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGGGTGGTGGAAGCGGTTaGGTTGCTTCAGTGATCACC +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQGGGSG*VASVIT
Trigger: GGTGATCACTGAAGCAACGCAACCGCTTCCACCACC...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp TTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTGGGTAAGAGACAAGCCCTaGCCTCAAAGAGCTTACAAT +
Preference number: 4 (lower is better)
Translates to: FTRVSCLGVGGSVAVWPWVRDKP*PQRAYN
Trigger: ATTGTAAGCTCTTTGAGGGCAGGGCTTGTCTCTTAC...CCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp CTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTCTCACTGTGGGTTCCTGGGTaGCCAGGGTCTCCTTTAATT +
Preference number: 4 (lower is better)
Translates to: LTLLASIFLLLHVVVILSLWVPG*PGSPLI
Trigger: AATTAAAGGAGACCCTGGCCACCCAGGAACCCACAG...TGAGAGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAACGGAAGACACCTCCTaGCGCTCGCTGAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVETEDTS*RSLRSI
Trigger: GATGGACCTCAGCGAGCGCCAGGAGGTGTCTTCCGT...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCAACTGGAGTAGAGGATaGAGCCCGGCACGTTGTCGT +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCNWSRG*SPARCR
Trigger: ACGACAACGTGCCGGGCTCCATCCTCTACTCCAGTT...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGCCAGGTCGCTGGGTGTaGTTCGGTCGTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVPGRWV*FGRCPH
Trigger: ATGTGGACAACGACCGAACCACACCCAGCGACCTGG...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGATGGCCTGCAGGCGCTaGTCCTTGGGCACATATTGG +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVMACRR*SLGTYW
Trigger: CCAATATGTGCCCAAGGACCAGCGCCTGCAGGCCAT...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGTACCAACTATTCCAGTaGATACACCAGTCCCTCAAC +
Preference number: 4 (lower is better)
Translates to: VLPEPSPGFPVWEWVAQLYQLFQ*IHQSLN
Trigger: GTTGAGGGACTGGTGTATCCACTGGAATAGTTGGTA...CAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGGTTGGGCCCCCTTTCTaGGTGGATTCAGGGGTAGTC +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVVGPPF*VDSGVV
Trigger: GACTACCCCTGAATCCACCCAGAAAGGGGGCCCAAC...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp ATCTCCGTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTAAAAATACCCATAAATaGACAAGGGTGTTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: ISVLPEPSPGFPVWEWVAKNTHK*TRVLGP
Trigger: GGGGCCCAACACCCTTGTCCATTTATGGGTATTTTT...AGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276297.9
3UTR CAA 72 bp TCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTaGCAGTTTGGCCTTGGAATGATTTGCAGTCCGATT +
Preference number: 4 (lower is better)
Translates to: SPGFPVWEWVAQ*QFGLGMICSPI
Trigger: AATCGGACTGCAAATCATTCCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTAGTTTGTTGGTGTGCCTaGTGGAGAGGAGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: IPVDTPVPQHTANKATQVVCWCA*WRGAGA
Trigger: AGCACCAGCTCCTCTCCATCAGGCACACCAACAAAC...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp TGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGGCTCATCCTCGTCTaGATCGTCACTTCGTTTCCG +
Preference number: 4 (lower is better)
Translates to: CLSVPDTESTLDIYCHSARLILV*IVTSFP
Trigger: CGGAAACGAAGTGACGATTCAGACGAGGATGAGCCT...GGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp TGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCGCTTTGTGCTTGCTGTaGTGGGAGCTCTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: CLSVPDTESTLDIYCHSAALCLL*WELLSF
Trigger: GAAGCTCAAGAGCTCCCATCACAGCAAGCACAAAGC...GGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACGCTTTGTGCTTGCTGTaGTGGGAGCTCTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: DTPVPQHTANKATQVRIHALCLL*WELLSF
Trigger: GAAGCTCAAGAGCTCCCATCACAGCAAGCACAAAGC...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp TGTGATGGCGCTCTAAGTGACCTCAGCAGAGTTCTTGAAAATGTTCATATCCTTGACCGAGTCCAGGGCTaGGTCCGAATCTCCCTCATC +
Preference number: 4 (lower is better)
Translates to: CDGALSDLSRVLENVHILDRVQG*VRISLI
Trigger: GATGAGGGAGATTCGGACTCAGCCCTGGACTCGGTC...AAGGATATGAACATTTTCAAGAACTCTGCTGAGGTCACTTAGAGCGCCATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACGTAGTGATACAGAGTTaGGGCTTGGCCGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: DTPVPQHTANKATQVRIHVVIQS*GLADVS
Trigger: GCTCACATCGGCCAAGCCTCAACTCTGTATCACTAC...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCCTGTGCGCTGCACGTTaGCCGTCAGTGGGACCCCAA +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPLCAAR*PSVGPQ
Trigger: TTGGGGTCCCACTGACGGTCAACGTGCAGCGCACAG...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTGTGCGCTGCACGTTaGCCGTCAGTGGGACCCCAA +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQLCAAR*PSVGPQ
Trigger: TTGGGGTCCCACTGACGGTCAACGTGCAGCGCACAG...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGACTGTGCGCTGCACGTTaGCCGTCAGTGGGACCCCAA +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGLCAAR*PSVGPQ
Trigger: TTGGGGTCCCACTGACGGTCAACGTGCAGCGCACAG...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACCTGAAGAGCCCAACCTaGTCCAAACAATGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: DTPVPQHTANKATQVRIHLKSPT*SKQWFR
Trigger: CCGGAACCATTGTTTGGATCAGGTTGGGCTCTTCAG...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGCTGAAGAGCCCAACCTaGTCCAAACAATGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQLKSPT*SKQWFR
Trigger: CCGGAACCATTGTTTGGATCAGGTTGGGCTCTTCAG...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGATATGGGCCAGCCCTTaGGTGGCAGCTAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQIWASP*VAARFS
Trigger: TGAAAACCTAGCTGCCACTCAAGGGCTGGCCCATAT...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGAGTGCTTCCAGAGTaGGGGGCTTCAGCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: IPVDTPVPQHTANKATQVRVLPE*GASALV
Trigger: AACAAGAGCTGAAGCCCCTCACTCTGGAAGCACTCG...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTAGGGACTTCAATGACTaGCCTCCAAAGCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVARDFND*PPKPQR
Trigger: CCTCTGAGGCTTTGGAGGTCAGTCATTGAAGTCCCT...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCCAGCAGGGACTTCAATaGCTGACCTCCAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCQQGLQ*LTSKAS
Trigger: TGAGGCTTTGGAGGTCAGTCATTGAAGTCCCTGCTG...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTCAGCAGGGACTTCAATaGCTGACCTCCAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAQQGLQ*LTSKAS
Trigger: TGAGGCTTTGGAGGTCAGTCATTGAAGTCCCTGCTG...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGAATCTCCGTGCTTCCTaGACCTTCACCAGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQNLRAS*TFTRVS
Trigger: GGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGATT...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp GACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACAGCCGGGACCACCTCTTaGTGTCCCTTTGGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: DTESTLDIYCHSASNKHTAGTTS*CPFGKS
Trigger: GGACTTTCCAAAGGGACAGCAAGAGGTGGTCCCGGC...TGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTCGAAAGAGTCGTCATTaGCTGCCAAGTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVARKSRH*LPSCWR
Trigger: CCTCCAGCAACTTGGCAGGCAATGACGACTCTTTCG...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAATGGGAGAGGGCAGGCTaGCGAAAGAGTCGTCATTGC +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVEWERAG*RKSRHC
Trigger: GCAATGACGACTCTTTCGGCAGCCTGCCCTCTCCCA...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp CCAACTATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACATCCGTTTCAGCAGACTaGGCGTCTTGGACTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PTIPVDTPVPQHTANKATSVSAD*ASWTWQ
Trigger: CTGCCAAGTCCAAGACGCGCAGTCTGCTGAAACGGA...TGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAATAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp GACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACACTGCTGCTGCTGGTCTaGGTGGAGTTGGAAACGCTC +
Preference number: 4 (lower is better)
Translates to: DTESTLDIYCHSASNKHTLLLLV*VELETL
Trigger: GAGCGTTTCCAACTCCACGCAGACCAGCAGCAGCAG...TGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCCCGACTGGCTGCTGCTaGTGCTGGTCTGCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPPTGCC*CWSAWS
Trigger: ACTCCACGCAGACCAGCAGCAGCAGCAGCCAGTCGG...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGACCGACTGGCTGCTGCTaGTGCTGGTCTGCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGPTGCC*CWSAWS
Trigger: ACTCCACGCAGACCAGCAGCAGCAGCAGCCAGTCGG...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGAGCCCTCTAAGTACATaGCCACCCGCTTGTTGCACG +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVSPLST*PPACCT
Trigger: CGTGCAACAAGCGGGTGGGCATGTACTTAGAGGGCT...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp GACCCTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTTGGAGCTGGAAGAATTaGGTCTCTTCAGTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: DPDSACKHLSAVARCRHPWSWKN*VSSVPW
Trigger: CCAAGGAACTGAAGAGACGCAATTCTTCCAGCTCCA...AGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCAGATGCTCAGGCGGCTaGTCATGGAGCTGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCRCSGG*SWSWKN
Trigger: ATTCTTCCAGCTCCATGAGCAGCCGCCTGAGCATCT...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCACGTTGTCGTAGATaGTCAGGCGGCTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVEARCRR*SGGCSW
Trigger: CCATGAGCAGCCGCCTGAGCATCTACGACAACGTGC...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp GACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACAGCACGTTGTCGTAGATaGTCAGGCGGCTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: DTESTLDIYCHSASNKHTARCRR*SGGCSW
Trigger: CCATGAGCAGCCGCCTGAGCATCTACGACAACGTGC...TGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp TGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCTCATCATTACCCAGGTaGCCGAGTGCTTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: CLSVPDTESTLDIYCHSASSLPR*PSASRV
Trigger: CACTCTGGAAGCACTCGGGCACCTGGGTAATGATGA...GGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp GACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACACACACCCACCACAGGTaGGCGATCGTGATCCACAGA +
Preference number: 4 (lower is better)
Translates to: DTESTLDIYCHSASNKHTHTHHR*AIVIHR
Trigger: TCTGTGGATCACGATCGCGCACCTGTGGTGGGTGTG...TGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGGGTGGTGGAAGCGGTTaGGTTGCTTCAGTGATCACC +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVGGGSG*VASVIT
Trigger: GGTGATCACTGAAGCAACGCAACCGCTTCCACCACC...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTGGAGGTGTCTCAGTGTaGCAGACACTGAATCCACCT +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAGGVSV*QTLNPP
Trigger: AGGTGGATTCAGTGTCTGGCACACTGAGACACCTCC...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCCGCAGGCTGTCGCCTaGCTTCAGGAGGCCGGCATT +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHPQAVA*LQEAGI
Trigger: AATGCCGGCCTCCTGAAGGCAGGCGACAGCCTGCGG...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512044.6
CDS-3UTR CCA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACAATTGGCTACTGGAGTaGAAGATGGGAGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: DTPVPQHTANKATQVRIHNWLLE*KMGGPW
Trigger: CCACGGACCTCCCATCTTCCACTCCAGTAGCCAATT...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp ACTGAACCTGATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACTGGTCTGCGTGGAGTTaGAAACGCTCCTCTTTCGTA +
Preference number: 4 (lower is better)
Translates to: TEPDASISFLEVSQCARHWSAWS*KRSSFV
Trigger: TACGAAAGAGGAGCGTTTCCAACTCCACGCAGACCA...GTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATCAGGTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTATGCTGCTGGTCTGCGTaGAGTTGGAAACGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: IPVDTPVPQHTANKATQVCCWSA*SWKRSS
Trigger: AGAGGAGCGTTTCCAACTCCACGCAGACCAGCAGCA...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAACTGCTGGTCTCCGACTaGCTGCTGCTGCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKLLVSD*LLLLLV
Trigger: GACCAGCAGCAGCAGCAGCCAGTCGGAGACCAGCAG...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGGAACACCGTGTCCTCTaGGTAGCTCTCGCGGTTCTT +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVEHRVL*VALAVL
Trigger: AAGAACCGCGAGAGCTACCCAGAGGACACGGTGTTC...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAATGTGGCCAGGGCCGTaGAAGCTTCCCGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKMWPGP*KLPVLQ
Trigger: CTGGAGGACGGGAAGCTTCCACGGCCCTGGCCACAT...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTCAGGTGTATCTGTTTTaGAGAGGACGGGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAQVYLF*RGRAGR
Trigger: TCTCCCTGCCCGTCCTCTCCAAAACAGATACACCTG...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATGCTGTCCAGGTCGCTaGGTGTGGTTCGGTCGTTGT +
Preference number: 4 (lower is better)
Translates to: DTESTLDIYCHSASNKHTCCPGR*VWFGRC
Trigger: ACAACGACCGAACCACACCCAGCGACCTGGACAGCA...TGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTGGCCGATGTGAGCTCTaGAAACTGTGCCATCTCAGT +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAGRCEL*KLCHLS
Trigger: ACTGAGATGGCACAGTTTCCAGAGCTCACATCGGCC...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCTGCAGCAGGTTCATCTaGGCCACAGACTGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: CLSVPDTESTLDIYCHSACSRFI*ATDWQL
Trigger: TAACTGCCAGTCTGTGGCCCAGATGAACCTGCTGCA...GGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp GACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACACACGTTGACCGTCAGTaGGACCCCAAACACACTCCG +
Preference number: 4 (lower is better)
Translates to: DTESTLDIYCHSASNKHTHVDRQ*DPKHTP
Trigger: CGGAGTGTGTTTGGGGTCCCACTGACGGTCAACGTG...TGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACGCAGGCGCTGGTCCTTaGGCACATATTGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: DTPVPQHTANKATQVRIHAGAGP*AHIGRS
Trigger: AGATCTACCAATATGTGCCCAAGGACCAGCGCCTGC...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGCAGGCGCTGGTCCTTaGGCACATATTGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCAGAGP*AHIGRS
Trigger: AGATCTACCAATATGTGCCCAAGGACCAGCGCCTGC...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACAATGGCCTGCAGGCGCTaGTCCTTGGGCACATATTGG +
Preference number: 4 (lower is better)
Translates to: DTESTLDIYCHSASNKHTMACRR*SLGTYW
Trigger: CCAATATGTGCCCAAGGACCAGCGCCTGCAGGCCAT...TGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGCAAACACCATGGTGGTaGAAGCGGTTGCGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQQTPWW*KRLRCF
Trigger: GAAGCAACGCAACCGCTTCCACCACCATGGTGTTTG...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCCAAACACCATGGTGGTaGAAGCGGTTGCGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCQTPWW*KRLRCF
Trigger: GAAGCAACGCAACCGCTTCCACCACCATGGTGTTTG...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
3UTR CAA 72 bp TCATCCTCTCAGCGTCGTTTCCTAACTGGACCTTTGTaGGAGAGAATCTCCGTGCTTCCTGAACCTTCACCA +
Preference number: 4 (lower is better)
Translates to: SSSQRRFLTGPL*ERISVLPEPSP
Trigger: TGGTGAAGGTTCAGGAAGCACGGAGATTCTCTCCAACAAAGGTCCAGTTAGGAAACGACGCTGAGAGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGCAGGCCATTTTCAGCTaGCATTCCATTGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVQAIFS*HSIGAG
Trigger: TCCTGCCCCAATGGAATGTCAGCTGAAAATGGCCTG...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCAAGTCCATTTGCCACTaGTGGCACAAGGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCKSICH*WHKAHP
Trigger: AGGATGAGCCTTGTGCCATCAGTGGCAAATGGACTT...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAATGTGATGGGAGCTCTTaGGCTTCAGGCTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVECDGSS*ASGSPS
Trigger: GGATGGAGAGCCTGAAGCTCAAGAGCTCCCATCACA...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGAGATCTCCACGCAGTTaGGCTGCTTCAGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVRSPRS*AASASP
Trigger: AGGAGAAGCTGAAGCAGCTCAACTGCGTGGAGATCT...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGTTGTTAAATGTTGACTaGTTGAAAGGATCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: VLPEPSPGFPVWEWVAQLLLNVD*LKGSKP
Trigger: GGGCTTCGATCCTTTCAATCAGTCAACATTTAACAA...CAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTAGAAACTGCCATTGGTaGGAGCTTTGGGGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVARNCHW*ELWGKC
Trigger: GCACTTTCCCCAAAGCTCTCACCAATGGCAGTTTCT...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGAGAAACTGCCATTGGTaGGAGCTTTGGGGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQRNCHW*ELWGKC
Trigger: GCACTTTCCCCAAAGCTCTCACCAATGGCAGTTTCT...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCATCCGCCAGGTCCCCTaGACTGGAGTAGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: TESTLDIYCHSASNKHTFIRQVP*TGVEDG
Trigger: TCCATCCTCTACTCCAGTTCAGGGGACCTGGCGGAT...GAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAATCTGGCGCAGAGCCTaGATCCGGGACTTGACCCCC +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKIWRRA*IRDLTP
Trigger: GGGGGTCAAGTCCCGGATTCAGGCTCTGCGCCAGAT...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACATCTGGCGCAGAGCCTaGATCCGGGACTTGACCCCC +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHIWRRA*IRDLTP
Trigger: GGGGGTCAAGTCCCGGATTCAGGCTCTGCGCCAGAT...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GACCCTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTCTTTTACGGCTGCTGTaGCATCGCTCAGGAAATAAA +
Preference number: 4 (lower is better)
Translates to: DPDSACKHLSAVARCRHPLLRLL*HRSGNK
Trigger: TTTATTTCCTGAGCGATGTCACAGCAGCCGTAAAAG...AGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGCAGCAGGGACTTCAATaGCTGACCTCCAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVQQGLQ*LTSKAS
Trigger: TGAGGCTTTGGAGGTCAGTCATTGAAGTCCCTGCTG...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GACCCTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTGGAGCAGTTCATCCCTaGACTAATCCATACTGGTTA +
Preference number: 4 (lower is better)
Translates to: DPDSACKHLSAVARCRHPGAVHP*TNPYWL
Trigger: TAACCAGTATGGATTAGTTCAGGGATGAACTGCTCC...AGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCCTGCATGCCATCTTCTaGCTTGACCTTTGGTGGACT +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCLHAIF*LDLWWT
Trigger: AGTCCACCAAAGGTCAAGGCAGAAGATGGCATGCAG...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp GAGAAAACACATCCAAGAGTACCAACTATTCCAGTGGATACACCAGTCCCTCAATCCAGATCAGGAACGTaGCGCCGCAGGTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: EKTHPRVPTIPVDTPVPQSRSGT*RRRFVG
Trigger: ACCAACAAACCTGCGGCGGCACGTTCCTGATCTGGA...TTGAGGGACTGGTGTATCCACTGGAATAGTTGGTACTCTTGGATGTGTTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGAGAGTCGTCATTGCCTaGCAAGTTGCTGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVRVVIA*QVAGGA
Trigger: TGCTCCTCCAGCAACTTGGCAGGCAATGACGACTCT...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp GACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATCATCCATCCCCTCTTaGAAGATGGGCCCGCTGATG +
Preference number: 4 (lower is better)
Translates to: DTESTLDIYCHSASNKHTSSIPS*KMGPLM
Trigger: CATCAGCGGGCCCATCTTGCAAGAGGGGATGGATGA...TGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAATCATCCATCCCCTCTTaGAAGATGGGCCCGCTGATG +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVESSIPS*KMGPLM
Trigger: CATCAGCGGGCCCATCTTGCAAGAGGGGATGGATGA...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACCGACTGGCTGCTGCTaGTGCTGGTCTGCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKPTGCC*CWSAWS
Trigger: ACTCCACGCAGACCAGCAGCAGCAGCAGCCAGTCGG...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAATCTCCGACTGGCTGCTaGTGCTGCTGGTCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKSPTGC*CCWSAW
Trigger: CCACGCAGACCAGCAGCAGCAGCAGCCAGTCGGAGA...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTAGGAGTGAGTATTTCTaGAGCAGGTTCATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVARSEYF*SRFIWA
Trigger: GGCCCAGATGAACCTGCTGCAGAAATACTCACTCCT...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGGGTTGTCCTGTGCGCTaGACGTTGACCGTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQGCPVR*TLTVSG
Trigger: CCCACTGACGGTCAACGTGCAGCGCACAGGACAACC...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp GGCCTTGGAATGATTTGCAGTCCGATTTTTCCTTCAGCAAATCGCTCTTTTGATGCATGGCCTGCTGGATaGTCTGAGGCAACGGTTGTC +
Preference number: 4 (lower is better)
Translates to: GLGMICSPIFPSANRSFDAWPAG*SEATVV
Trigger: GACAACCGTTGCCTCAGAGCATCCAGCAGGCCATGC...ATCAAAAGAGCGATTTGCTGAAGGAAAAATCGGACTGCAAATCATTCCAAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTCCTGGAAAAGCTTCTTaGACTCGGCGATCATATGGG +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAPGKAS*TRRSYG
Trigger: CCCATATGATCGCCGAGTGCAAGAAGCTTTTCCAGG...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAACCCAGGTGCCCGAGTaGTTCCAGAGTGAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKTQVPE*FQSEGL
Trigger: AAGCCCCTCACTCTGGAAGCACTCGGGCACCTGGGT...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTCCAGAATTGGCTACTaGAGTGGAAGATGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQSRIGY*SGRWEV
Trigger: GACCTCCCATCTTCCACTCCAGTAGCCAATTCTGGA...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCAGCTGGACAGTTCCTTaGGAGAGGGCAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPSWTVP*ERAGCR
Trigger: TCGGCAGCCTGCCCTCTCCCAAGGAACTGTCCAGCT...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGAGCTGGACAGTTCCTTaGGAGAGGGCAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQSWTVP*ERAGCR
Trigger: TCGGCAGCCTGCCCTCTCCCAAGGAACTGTCCAGCT...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACTGCTGGTCTCCGACTaGCTGCTGCTGCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKLLVSD*LLLLLV
Trigger: GACCAGCAGCAGCAGCAGCCAGTCGGAGACCAGCAG...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGAACACCGTGTCCTCTaGGTAGCTCTCGCGGTTCTT +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVEEHRVL*VALAVL
Trigger: AAGAACCGCGAGAGCTACCCAGAGGACACGGTGTTC...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACATGTGGCCAGGGCCGTaGAAGCTTCCCGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHMWPGP*KLPVLQ
Trigger: CTGGAGGACGGGAAGCTTCCACGGCCCTGGCCACAT...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATCAGGCGGCTGCTCATaGAGCTGGAAGAATTGCGTC +
Preference number: 4 (lower is better)
Translates to: DTESTLDIYCHSASNKHTSGGCS*SWKNCV
Trigger: GACGCAATTCTTCCAGCTCCATGAGCAGCCGCCTGA...TGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAAACTGGAGTAGAGGATaGAGCCCGGCACGTTGTCGT +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVENWSRG*SPARCR
Trigger: ACGACAACGTGCCGGGCTCCATCCTCTACTCCAGTT...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGACCAGGTCCCCTGAACTaGAGTAGAGGATGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGPGPLN*SRGWSP
Trigger: CGGGCTCCATCCTCTACTCCAGTTCAGGGGACCTGG...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCCCAGGTCGCTGGGTGTaGTTCGGTCGTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: TESTLDIYCHSASNKHTFPGRWV*FGRCPH
Trigger: ATGTGGACAACGACCGAACCACACCCAGCGACCTGG...GAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp GAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCACATGCTGTCCAGGTCGCTaGGTGTGGTTCGGTCGTTGT +
Preference number: 4 (lower is better)
Translates to: ESTLDIYCHSASNKHTFTCCPGR*VWFGRC
Trigger: ACAACGACCGAACCACACCCAGCGACCTGGACAGCA...TGTGAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAGGTGCCTGTTGGACCTaGTTAGGGAAGCCCCAACCC +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGGACWT*LGKPQP
Trigger: GGGTTGGGGCTTCCCTAACCAGGTCCAACAGGCACC...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCACACACGTTGACCGTCAGTaGGACCCCAAACACACTCCG +
Preference number: 4 (lower is better)
Translates to: ESTLDIYCHSASNKHTFTHVDRQ*DPKHTP
Trigger: CGGAGTGTGTTTGGGGTCCCACTGACGGTCAACGTG...TGTGAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp ACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCTCCGGAGGTATCGCATaGCCTGCTGGATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: TESTLDIYCHSASNKHTFSGGIA*PAGCSE
Trigger: CTCAGAGCATCCAGCAGGCCATGCGATACCTCCGGA...GAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCCACGGCCAGGTTGGTTaGGGTCATCTGGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCHGQVG*GHLVFF
Trigger: AAAGAAAACCAGATGACCCCAACCAACCTGGCCGTG...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACCACGGCCAGGTTGGTTaGGGTCATCTGGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: DTPVPQHTANKATQVRIHHGQVG*GHLVFF
Trigger: AAAGAAAACCAGATGACCCCAACCAACCTGGCCGTG...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACAAACAAACACCATGGTaGTGGAAGCGGTTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: DTPVPQHTANKATQVRIHKQTPW*WKRLRC
Trigger: GCAACGCAACCGCTTCCACCACCATGGTGTTTGTTT...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp GAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCACAGTTGGGCCCCCTTTCTaGGTGGATTCAGGGGTAGTC +
Preference number: 4 (lower is better)
Translates to: ESTLDIYCHSASNKHTFTVGPPF*VDSGVV
Trigger: GACTACCCCTGAATCCACCCAGAAAGGGGGCCCAAC...TGTGAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACTTCGTCCACATCCTTTaGAAGATGACCCATTGGCCT +
Preference number: 4 (lower is better)
Translates to: DTPVPQHTANKATQVRIHFVHIL*KMTHWP
Trigger: AGGCCAATGGGTCATCTTTCAAAGGATGTGGACGAA...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAATCCGCCAGGTCCCCTaGACTGGAGTAGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKIRQVP*TGVEDG
Trigger: TCCATCCTCTACTCCAGTTCAGGGGACCTGGCGGAT...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTAAACTTCTCCGACCACTaGTTGACTATCCGCTGCATC +
Preference number: 4 (lower is better)
Translates to: IPVDTPVPQHTANKATQVNFSDH*LTIRCI
Trigger: GATGCAGCGGATAGTCAATCAGTGGTCGGAGAAGTT...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGAACTTCTCCGACCACTaGTTGACTATCCGCTGCATC +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVNFSDH*LTIRCI
Trigger: GATGCAGCGGATAGTCAATCAGTGGTCGGAGAAGTT...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAGACCGAGTCCAGGGCTaGGTCCGAATCTCCCTCATC +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKDRVQG*VRISLI
Trigger: GATGAGGGAGATTCGGACTCAGCCCTGGACTCGGTC...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGGAGGCTTGGCCGATGTaGGCTCTGGAAACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQEAWPM*ALETVP
Trigger: TGGCACAGTTTCCAGAGCTCACATCGGCCAAGCCTC...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACGCCTGCTGGATGCTCTaGGGCAACGGTTGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHACWML*GNGCPV
Trigger: CACAGGACAACCGTTGCCTCAGAGCATCCAGCAGGC...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTATCTGGCGCAGAGCCTaGATCCGGGACTTGACCCCC +
Preference number: 4 (lower is better)
Translates to: DTGTHTLISQENEVSSLSIWRRA*IRDLTP
Trigger: GGGGGTCAAGTCCCGGATTCAGGCTCTGCGCCAGAT...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAAGGGACTTCAATGACTaGCCTCCAAAGCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVERDFND*PPKPQR
Trigger: CCTCTGAGGCTTTGGAGGTCAGTCATTGAAGTCCCT...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GAGAAAACACATCCAAGAGTACCAACTATTCCAGTGGATACACCAGTCCCTCAACAGCAGGGACTTCAATaGCTGACCTCCAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: EKTHPRVPTIPVDTPVPQQQGLQ*LTSKAS
Trigger: TGAGGCTTTGGAGGTCAGTCATTGAAGTCCCTGCTG...TTGAGGGACTGGTGTATCCACTGGAATAGTTGGTACTCTTGGATGTGTTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp CCAACTATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACAACAGGTGCGCGATCGTaGTCCACAGAGGTTAGTAAA +
Preference number: 4 (lower is better)
Translates to: PTIPVDTPVPQHTANKATTGARS*STEVSK
Trigger: TTTACTAACCTCTGTGGATCACGATCGCGCACCTGT...TGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAATAGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGACAGGTGCGCGATCGTaGTCCACAGAGGTTAGTAAA +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVTGARS*STEVSK
Trigger: TTTACTAACCTCTGTGGATCACGATCGCGCACCTGT...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGCTCTGCACATGTAGGTaGGTTTGGATTTTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVLCTCR*VWIFLA
Trigger: GGCCAGGAAAATCCAAACTCACCTACATGTGCAGAG...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACCAGTGTGCCAGACACTaGATCCACCTTAGACATCTA +
Preference number: 4 (lower is better)
Translates to: DTPVPQHTANKATQVRIHQCARH*IHLRHL
Trigger: TAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTG...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAGTGGAGTCCCTGATGTaGTCGCTAAAGGACCTCCGG +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKVESLM*SLKDLR
Trigger: CCGGAGGTCCTTTAGCGATCACATCAGGGACTCCAC...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512044.6
CDS-3UTR GCA 90 bp GACCCTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTTTTTCCATACTTGCCTaGAAGCTGTCAGCTACTAGT +
Preference number: 4 (lower is better)
Translates to: DPDSACKHLSAVARCRHPFSILA*KLSATS
Trigger: ACTAGTAGCTGACAGCTTGCAGGCAAGTATGGAAAA...AGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAACGAAAGAGTCGTCATTaGCTGCCAAGTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVERKSRH*LPSCWR
Trigger: CCTCCAGCAACTTGGCAGGCAATGACGACTCTTTCG...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGATGGGAGAGGGCAGGCTaGCGAAAGAGTCGTCATTGC +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGWERAG*RKSRHC
Trigger: GCAATGACGACTCTTTCGGCAGCCTGCCCTCTCCCA...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGTGGGAGAGGGCAGGCTaGCGAAAGAGTCGTCATTGC +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQWERAG*RKSRHC
Trigger: GCAATGACGACTCTTTCGGCAGCCTGCCCTCTCCCA...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGACTGCTGCTGCTGGTCTaGGTGGAGTTGGAAACGCTC +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGLLLLV*VELETL
Trigger: GAGCGTTTCCAACTCCACGCAGACCAGCAGCAGCAG...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGGAGCTGGAAGAATTaGGTCTCTTCAGTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQWSWKN*VSSVPW
Trigger: CCAAGGAACTGAAGAGACGCAATTCTTCCAGCTCCA...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp GAGAAAACACATCCAAGAGTACCAACTATTCCAGTGGATACACCAGTCCCTCAAAGATGCTCAGGCGGCTaGTCATGGAGCTGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: EKTHPRVPTIPVDTPVPQRCSGG*SWSWKN
Trigger: ATTCTTCCAGCTCCATGAGCAGCCGCCTGAGCATCT...TTGAGGGACTGGTGTATCCACTGGAATAGTTGGTACTCTTGGATGTGTTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGCTGCTTCAGCATGTCTaGCACGTCATAAGCAGACTG +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVLLQHV*HVISRL
Trigger: CAGTCTGCTTATGACGTGGCAGACATGCTGAAGCAG...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp CTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTCTCAGTTTTCTTTTACGGCTaGTGTGACATCGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LTLLASIFLLLHVVVILSVFFYG*CDIAQE
Trigger: TTCCTGAGCGATGTCACAGCAGCCGTAAAAGAAAAC...TGAGAGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp TTTGATGGTTTGACCAAGTGGGTAGTCGTTGAATTACACATCTGCATAACAGGGCAGCTGACATTCCATTaGGGCAGGAAGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: FDGLTKWVVVELHICITGQLTFH*GRKEAA
Trigger: TGCAGCCTCCTTCCTGCCCCAATGGAATGTCAGCTG...CCCTGTTATGCAGATGTGTAATTCAACGACTACCCACTTGGTCAAACCATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS-3UTR CCA 90 bp GATGGTTTGACCAAGTGGGTAGTCGTTGAATTACACATCTGCATAACAGGGCAATTATCTGTGGGTTCCTaGGTGGCCAGGGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: DGLTKWVVVELHICITGQLSVGS*VARVSF
Trigger: AAAGGAGACCCTGGCCACCCAGGAACCCACAGATAA...TTGCCCTGTTATGCAGATGTGTAATTCAACGACTACCCACTTGGTCAAACCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS-3UTR CCA 90 bp TGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCCTCTTGCTGTCCCTTTaGAAAGTCCATTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: CLSVPDTESTLDIYCHSALLLSL*KVHLPL
Trigger: CAGTGGCAAATGGACTTTCCAAAGGGACAGCAAGAG...GGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTCTCTTGCTGTCCCTTTaGAAAGTCCATTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVALLLSL*KVHLPL
Trigger: CAGTGGCAAATGGACTTTCCAAAGGGACAGCAAGAG...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCTGCTGCTGGTCTGCGTaGAGTTGGAAACGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TESTLDIYCHSASNKHTFCCWSA*SWKRSS
Trigger: AGAGGAGCGTTTCCAACTCCACGCAGACCAGCAGCA...GAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAGGCTGCTGCTGCTGCTaGTCTGCGTGGAGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGGCCCC*SAWSWK
Trigger: TTTCCAACTCCACGCAGACCAGCAGCAGCAGCAGCC...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCGGCTGCTGCTGCTGCTaGTCTGCGTGGAGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPGCCCC*SAWSWK
Trigger: TTTCCAACTCCACGCAGACCAGCAGCAGCAGCAGCC...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAACAGGTGTATCTGTTTTaGAGAGGACGGGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVEQVYLF*RGRAGR
Trigger: TCTCCCTGCCCGTCCTCTCCAAAACAGATACACCTG...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCCAGGTCGCTGGGTGTaGTTCGGTCGTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQPGRWV*FGRCPH
Trigger: ATGTGGACAACGACCGAACCACACCCAGCGACCTGG...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCTGCTGTCCAGGTCGCTaGGTGTGGTTCGGTCGTTGT +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPCCPGR*VWFGRC
Trigger: ACAACGACCGAACCACACCCAGCGACCTGGACAGCA...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAATGCTGTCCAGGTCGCTaGGTGTGGTTCGGTCGTTGT +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKCCPGR*VWFGRC
Trigger: ACAACGACCGAACCACACCCAGCGACCTGGACAGCA...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGATCAGTCGGTGCCTGTTaGACCTGGTTAGGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGSVGAC*TWLGKP
Trigger: GGGCTTCCCTAACCAGGTCCAACAGGCACCGACTGA...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GAGAAAACACATCCAAGAGTACCAACTATTCCAGTGGATACACCAGTCCCTCAAGGCCGATGTGAGCTCTaGAAACTGTGCCATCTCAGT +
Preference number: 4 (lower is better)
Translates to: EKTHPRVPTIPVDTPVPQGRCEL*KLCHLS
Trigger: ACTGAGATGGCACAGTTTCCAGAGCTCACATCGGCC...TTGAGGGACTGGTGTATCCACTGGAATAGTTGGTACTCTTGGATGTGTTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp GACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATGCAGCAGGTTCATCTaGGCCACAGACTGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: DTESTLDIYCHSASNKHTCSRFI*ATDWQL
Trigger: TAACTGCCAGTCTGTGGCCCAGATGAACCTGCTGCA...TGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGACACGTTGACCGTCAGTaGGACCCCAAACACACTCCG +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGHVDRQ*DPKHTP
Trigger: CGGAGTGTGTTTGGGGTCCCACTGACGGTCAACGTG...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GAGAAAACACATCCAAGAGTACCAACTATTCCAGTGGATACACCAGTCCCTCAAGCAGGCGCTGGTCCTTaGGCACATATTGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: EKTHPRVPTIPVDTPVPQAGAGP*AHIGRS
Trigger: AGATCTACCAATATGTGCCCAAGGACCAGCGCCTGC...TTGAGGGACTGGTGTATCCACTGGAATAGTTGGTACTCTTGGATGTGTTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGCACGGCCAGGTTGGTTaGGGTCATCTGGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVHGQVG*GHLVFF
Trigger: AAAGAAAACCAGATGACCCCAACCAACCTGGCCGTG...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGATTTCCTCGGGAACCTaGAAAAGCTTCTTGCACTCG +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQISSGT*KSFLHS
Trigger: CGAGTGCAAGAAGCTTTTCCAGGTTCCCGAGGAAAT...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTACCATTCTGGCATGTaGCCCCTTAAGTCAACTCTG +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAYHSGM*PLKSTL
Trigger: CAGAGTTGACTTAAGGGGCCACATGCCAGAATGGTA...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCTACCATTCTGGCATGTaGCCCCTTAAGTCAACTCTG +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCYHSGM*PLKSTL
Trigger: CAGAGTTGACTTAAGGGGCCACATGCCAGAATGGTA...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ACTGAACCTGATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACTTGGTTTCAGTGTTCTaGTTACTGAAGGAATCCCGG +
Preference number: 4 (lower is better)
Translates to: TEPDASISFLEVSQCARHLVSVF*LLKESR
Trigger: CCGGGATTCCTTCAGTAACCAGAACACTGAAACCAA...GTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATCAGGTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp CTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTCTCAGTTGCAGTTTGGCCTTaGAATGATTTGCAGTCCGAT +
Preference number: 4 (lower is better)
Translates to: LTLLASIFLLLHVVVILSVAVWP*NDLQSD
Trigger: ATCGGACTGCAAATCATTCCAAGGCCAAACTGCAAC...TGAGAGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACGGCTCAGTTGCAGTTTaGCCTTGGAATGATTTGCAG +
Preference number: 4 (lower is better)
Translates to: DTPVPQHTANKATQVRIHGSVAV*PWNDLQ
Trigger: CTGCAAATCATTCCAAGGCCAAACTGCAACTGAGCC...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp TGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCTTCCCATTTCGTGGTTaGGATCATGGCTCTATTCTG +
Preference number: 4 (lower is better)
Translates to: CLSVPDTESTLDIYCHSAFPFRG*DHGSIL
Trigger: CAGAATAGAGCCATGATCTCAACCACGAAATGGGAA...GGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGGTTTCCTTCGTTGCTaGGCAATTACAGCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCGFLRC*AITAEL
Trigger: TAACTCTGCTGTAATTGCTCAGCAACGAAGGAAACC...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp ACTGAACCTGATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACAATCATGCTCTCTCTTaGCCAAGGAAATATCGATGG +
Preference number: 4 (lower is better)
Translates to: TEPDASISFLEVSQCARHNHALS*PRKYRW
Trigger: CCATCGATATTTCCTTGGTCAAGAGAGAGCATGATT...GTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATCAGGTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCGATCAACCCCAGCTTTaGGGGCGCTTTGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPDQPQL*GRFVLA
Trigger: AGCAAGCACAAAGCGCCCTCAAAGCTGGGGTTGATC...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCACAAGATCTCCACGCAGTTaGGCTGCTTCAGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ESTLDIYCHSASNKHTFTRSPRS*AASASP
Trigger: AGGAGAAGCTGAAGCAGCTCAACTGCGTGGAGATCT...TGTGAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAAGAAACTGCCATTGGTaGGAGCTTTGGGGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVERNCHW*ELWGKC
Trigger: GCACTTTCCCCAAAGCTCTCACCAATGGCAGTTTCT...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCTCTCCGACCACTGATTaGCTATCCGCTGCATCCCCT +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPSPTTD*LSAASP
Trigger: AGGGGATGCAGCGGATAGTCAATCAGTGGTCGGAGA...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGATCTCCGACCACTGATTaGCTATCCGCTGCATCCCCT +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGSPTTD*LSAASP
Trigger: AGGGGATGCAGCGGATAGTCAATCAGTGGTCGGAGA...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACGAGGCTTGGCCGATGTaGGCTCTGGAAACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHEAWPM*ALETVP
Trigger: TGGCACAGTTTCCAGAGCTCACATCGGCCAAGCCTC...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGACTGTCCTTCGTAGTTaGCACAGTCTATGGCACCTT +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVTVLRS*HSLWHL
Trigger: AAGGTGCCATAGACTGTGTCAACTACGAAGGACAGT...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCACAATATGGGCCAGCCCTTaGGTGGCAGCTAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: ESTLDIYCHSASNKHTFTIWASP*VAARFS
Trigger: TGAAAACCTAGCTGCCACTCAAGGGCTGGCCCATAT...TGTGAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGACGAGTGCTTCCAGAGTaGGGGGCTTCAGCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGRVLPE*GASALV
Trigger: AACAAGAGCTGAAGCCCCTCACTCTGGAAGCACTCG...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGTGTTGGTAGTCAGCTaGGTCATCATTACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVEVLVVS*VIITQV
Trigger: CACCTGGGTAATGATGACTCAGCTGACTACCAACAC...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGCAGTGTTCTGGTTACTaGAGGAATCCCGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQQCSGY*RNPGSL
Trigger: TAAAGATCCGGGATTCCTTCAGTAACCAGAACACTG...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTCAGTGTTCTGGTTACTaGAGGAATCCCGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAQCSGY*RNPGSL
Trigger: TAAAGATCCGGGATTCCTTCAGTAACCAGAACACTG...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp CCAACTATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACAGTTGCGTTGCTTCAGTaGTCACCTAGATTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: PTIPVDTPVPQHTANKATVALLQ*SPRFGV
Trigger: GACACCAAATCTAGGTGATCACTGAAGCAACGCAAC...TGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAATAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp ACTGAACCTGATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACCTTTGCTCATCTTGGTaGGAAAACACATCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: TEPDASISFLEVSQCARHLCSSW*ENTSKS
Trigger: ACTCTTGGATGTGTTTTCTCACCAAGATGAGCAAAG...GTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATCAGGTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGCAGTGTGCCAGACACTaGATCCACCTTAGACATCTA +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVQCARH*IHLRHL
Trigger: TAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTG...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCTGTTTCACTGTTGCGTaGTCAGGTACTCATCAGGTA +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCCFTVA*SGTHQV
Trigger: TACCTGATGAGTACCTGATCACGCAACAGTGAAACA...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520226.5
CDS-3UTR GCA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACGCAGTCCTCTGTTTGTaGAAGGAGTATCCAAGAACT +
Preference number: 4 (lower is better)
Translates to: DTPVPQHTANKATQVRIHAVLCL*KEYPRT
Trigger: AGTTCTTGGATACTCCTTGCACAAACAGAGGACTGC...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp ACTGAACCTGATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACATCTTCATAAAGCTGTaGATACTGGGGGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: TEPDASISFLEVSQCARHIFIKL*ILGETS
Trigger: ACTGGTTTCCCCCAGTATGCACAGCTTTATGAAGAT...GTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATCAGGTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp CTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTCTCAAAGTATTTAGACGCCTaGATAGAGCCTCAATGGCAT +
Preference number: 4 (lower is better)
Translates to: LTLLASIFLLLHVVVILSKYLDA*IEPQWH
Trigger: ATGCCATTGAGGCTCTATGCAGGCGTCTAAATACTT...TGAGAGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAGCCGGGACCACCTCTTaGTGTCCCTTTGGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKAGTTS*CPFGKS
Trigger: GGACTTTCCAAAGGGACAGCAAGAGGTGGTCCCGGC...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCCGAAAGAGTCGTCATTaGCTGCCAAGTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TESTLDIYCHSASNKHTFRKSRH*LPSCWR
Trigger: CCTCCAGCAACTTGGCAGGCAATGACGACTCTTTCG...GAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGATCCGTTTCAGCAGACTaGGCGTCTTGGACTTGGCAG +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGSVSAD*ASWTWQ
Trigger: CTGCCAAGTCCAAGACGCGCAGTCTGCTGAAACGGA...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAATCCGTTTCAGCAGACTaGGCGTCTTGGACTTGGCAG +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKSVSAD*ASWTWQ
Trigger: CTGCCAAGTCCAAGACGCGCAGTCTGCTGAAACGGA...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCCCTCTAAGTACATaGCCACCCGCTTGTTGCACG +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGSPLST*PPACCT
Trigger: CGTGCAACAAGCGGGTGGGCATGTACTTAGAGGGCT...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAGTTCATTCAGGGAGTTaGCTGTGCTGTCCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGVHSGS*LCCPGR
Trigger: GCGACCTGGACAGCACAGGCAACTCCCTGAATGAAC...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGGAGCTCTGGAAACTGTaGCATCTCAGTCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQELWKL*HLSRCL
Trigger: CAGGCACCGACTGAGATGGCACAGTTTCCAGAGCTC...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAGAGCTCTGGAAACTGTaGCATCTCAGTCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGELWKL*HLSRCL
Trigger: CAGGCACCGACTGAGATGGCACAGTTTCCAGAGCTC...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTGGTTGTCCTGTGCGCTaGACGTTGACCGTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: DTGTHTLISQENEVSSLSGCPVR*TLTVSG
Trigger: CCCACTGACGGTCAACGTGCAGCGCACAGGACAACC...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACTCGAGCAGGATGAGGTaGCATACTGTTTTGGACATA +
Preference number: 4 (lower is better)
Translates to: DTPVPQHTANKATQVRIHSSRMR*HTVLDI
Trigger: TATGTCCAAAACAGTATGGCACCTCATCCTGCTCGA...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCGAGCAGGATGAGGTaGCATACTGTTTTGGACATA +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVASSRMR*HTVLDI
Trigger: TATGTCCAAAACAGTATGGCACCTCATCCTGCTCGA...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCACACCCACCACAGGTaGGCGATCGTGATCCACAGA +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHHTHHR*AIVIHR
Trigger: TCTGTGGATCACGATCGCGCACCTGTGGTGGGTGTG...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGTGGAAGCGGTTGCGTTaGTTCAGTGATCACCTAGAT +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVWKRLR*FSDHLD
Trigger: ATCTAGGTGATCACTGAAGCAACGCAACCGCTTCCA...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGGGTGGTGGAAGCGGTTaGGTTGCTTCAGTGATCACC +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQGGGSG*VASVIT
Trigger: GGTGATCACTGAAGCAACGCAACCGCTTCCACCACC...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp TGTGATGGCGCTCTAAGTGACCTCAGCAGAGTTCTTGAAAATGTTCATATCCTTGGAGGTGTCTCAGTGTaGCAGACACTGAATCCACCT +
Preference number: 4 (lower is better)
Translates to: CDGALSDLSRVLENVHILGGVSV*QTLNPP
Trigger: AGGTGGATTCAGTGTCTGGCACACTGAGACACCTCC...AAGGATATGAACATTTTCAAGAACTCTGCTGAGGTCACTTAGAGCGCCATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAATGTCCGGCTTCTTTCTaGACATCAAGCACGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKCPASF*TSSTAG
Trigger: GCCTGCCGTGCTTGATGTGCAGAAAGAAGCCGGACA...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358919.6
CDS-3UTR CCA 90 bp GGCCTTGGAATGATTTGCAGTCCGATTTTTCCTTCAGCAAATCGCTCTTTTGATTTATCTGTGGGTTCCTaGGTGGCCAGGGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GLGMICSPIFPSANRSFDLSVGS*VARVSF
Trigger: AAAGGAGACCCTGGCCACCCAGGAACCCACAGATAA...ATCAAAAGAGCGATTTGCTGAAGGAAAAATCGGACTGCAAATCATTCCAAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTTACGAAGTCTGACTTaGTTATCTGTGGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVALRSLT*LSVGSW
Trigger: CCAGGAACCCACAGATAACCAAGTCAGACTTCGTAA...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGCTCTTGCTGTCCCTTTaGAAAGTCCATTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVLLLSL*KVHLPL
Trigger: CAGTGGCAAATGGACTTTCCAAAGGGACAGCAAGAG...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATGGTCTGCGTGGAGTTaGAAACGCTCCTCTTTCGTA +
Preference number: 4 (lower is better)
Translates to: DTESTLDIYCHSASNKHTWSAWS*KRSSFV
Trigger: TACGAAAGAGGAGCGTTTCCAACTCCACGCAGACCA...TGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAATGGTCTGCGTGGAGTTaGAAACGCTCCTCTTTCGTA +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVEWSAWS*KRSSFV
Trigger: TACGAAAGAGGAGCGTTTCCAACTCCACGCAGACCA...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCTGCTGCTGGTCTGCGTaGAGTTGGAAACGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPCCWSA*SWKRSS
Trigger: AGAGGAGCGTTTCCAACTCCACGCAGACCAGCAGCA...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAGGCTGCTGCTGCTGCTaGTCTGCGTGGAGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKGCCCC*SAWSWK
Trigger: TTTCCAACTCCACGCAGACCAGCAGCAGCAGCAGCC...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCGAACACCGTGTCCTCTaGGTAGCTCTCGCGGTTCTT +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPEHRVL*VALAVL
Trigger: AAGAACCGCGAGAGCTACCCAGAGGACACGGTGTTC...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTAGTCTCTTCAGTTCCTTaGGGCTGTCGCTACTGTTTT +
Preference number: 4 (lower is better)
Translates to: IPVDTPVPQHTANKATQVVSSVP*GCRYCF
Trigger: AAAACAGTAGCGACAGCCCCAAGGAACTGAAGAGAC...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp GACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACAGGCTGCTCATGGAGCTaGAAGAATTGCGTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: DTESTLDIYCHSASNKHTGCSWS*KNCVSS
Trigger: TGAAGAGACGCAATTCTTCCAGCTCCATGAGCAGCC...TGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGGCTGCTCATGGAGCTaGAAGAATTGCGTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVEGCSWS*KNCVSS
Trigger: TGAAGAGACGCAATTCTTCCAGCTCCATGAGCAGCC...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAATCAGGCGGCTGCTCATaGAGCTGGAAGAATTGCGTC +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKSGGCS*SWKNCV
Trigger: GACGCAATTCTTCCAGCTCCATGAGCAGCCGCCTGA...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGTCAGGCGGCTGCTCATaGAGCTGGAAGAATTGCGTC +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQSGGCS*SWKNCV
Trigger: GACGCAATTCTTCCAGCTCCATGAGCAGCCGCCTGA...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGAACTGGAGTAGAGGATaGAGCCCGGCACGTTGTCGT +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQNWSRG*SPARCR
Trigger: ACGACAACGTGCCGGGCTCCATCCTCTACTCCAGTT...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAACTGGAGTAGAGGATaGAGCCCGGCACGTTGTCGT +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGNWSRG*SPARCR
Trigger: ACGACAACGTGCCGGGCTCCATCCTCTACTCCAGTT...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACTCCGGAGGTATCGCATaGCCTGCTGGATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHSGGIA*PAGCSE
Trigger: CTCAGAGCATCCAGCAGGCCATGCGATACCTCCGGA...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTAATTTCCTCGGGAACCTaGAAAAGCTTCTTGCACTCG +
Preference number: 4 (lower is better)
Translates to: IPVDTPVPQHTANKATQVISSGT*KSFLHS
Trigger: CGAGTGCAAGAAGCTTTTCCAGGTTCCCGAGGAAAT...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTCAAAACAAAACCCTGTaGATCAGAGCCAGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAQNKTL*IRASKA
Trigger: AGCCTTACTGGCTCTGATCCACAGGGTTTTGTTTTG...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAACCAGGGTTTCCTGTTTaGGAGTGGGTGGCTCAGTTG +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKPGFPV*EWVAQL
Trigger: CAACTGAGCCACCCACTCCCAAACAGGAAACCCTGG...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGAATCACAAGCTTCCTTaGCTTCAATTTCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQNHKLP*LQFLPA
Trigger: GGCTGGCAGAAATTGAAGCCAAGGAAGCTTGTGATT...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512044.6
3UTR CAA 72 bp GTGGGTGGCTCAGTTGCAGTTTGGCCTTGGAATGATTaGCAGTCCGATTTTTCCTTCAGCAAATCGCTCTTT +
Preference number: 4 (lower is better)
Translates to: VGGSVAVWPWND*QSDFSFSKSLF
Trigger: AAAGAGCGATTTGCTGAAGGAAAAATCGGACTGCAAATCATTCCAAGGCCAAACTGCAACTGAGCCACCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGAATCATGCTCTCTCTTaGCCAAGGAAATATCGATGG +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQNHALS*PRKYRW
Trigger: CCATCGATATTTCCTTGGTCAAGAGAGAGCATGATT...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCTCACTTCGTTTCCGATaGGGACTAATTTCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCSLRFR*GLISSF
Trigger: GAAGCTAGAAATTAGTCCTCATCGGAAACGAAGTGA...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCAGGCTCATCCTCGTCTaGATCGTCACTTCGTTTCCG +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPRLILV*IVTSFP
Trigger: CGGAAACGAAGTGACGATTCAGACGAGGATGAGCCT...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGGCTCATCCTCGTCTaGATCGTCACTTCGTTTCCG +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGRLILV*IVTSFP
Trigger: CGGAAACGAAGTGACGATTCAGACGAGGATGAGCCT...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGAGGCTCATCCTCGTCTaGATCGTCACTTCGTTTCCG +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQRLILV*IVTSFP
Trigger: CGGAAACGAAGTGACGATTCAGACGAGGATGAGCCT...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAATGTGATGGGAGCTCTTaGGCTTCAGGCTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKCDGSS*ASGSPS
Trigger: GGATGGAGAGCCTGAAGCTCAAGAGCTCCCATCACA...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACTGTGATGGGAGCTCTTaGGCTTCAGGCTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHCDGSS*ASGSPS
Trigger: GGATGGAGAGCCTGAAGCTCAAGAGCTCCCATCACA...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAGCTTTGTGCTTGCTGTaGTGGGAGCTCTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKALCLL*WELLSF
Trigger: GAAGCTCAAGAGCTCCCATCACAGCAAGCACAAAGC...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACGATCAACCCCAGCTTTaGGGGCGCTTTGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHDQPQL*GRFVLA
Trigger: AGCAAGCACAAAGCGCCCTCAAAGCTGGGGTTGATC...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACTCTCCGACCACTGATTaGCTATCCGCTGCATCCCCT +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHSPTTD*LSAASP
Trigger: AGGGGATGCAGCGGATAGTCAATCAGTGGTCGGAGA...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGGTAGTGATACAGAGTTaGGGCTTGGCCGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQVVIQS*GLADVS
Trigger: GCTCACATCGGCCAAGCCTCAACTCTGTATCACTAC...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTGAAGAGCCCAACCTaGTCCAAACAATGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQLKSPT*SKQWFR
Trigger: CCGGAACCATTGTTTGGATCAGGTTGGGCTCTTCAG...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCCTGAAGAGCCCAACCTaGTCCAAACAATGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPLKSPT*SKQWFR
Trigger: CCGGAACCATTGTTTGGATCAGGTTGGGCTCTTCAG...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGCTTTTACGGCTGCTGTaGCATCGCTCAGGAAATAAA +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVLLRLL*HRSGNK
Trigger: TTTATTTCCTGAGCGATGTCACAGCAGCCGTAAAAG...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAATATGGGCCAGCCCTTaGGTGGCAGCTAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKIWASP*VAARFS
Trigger: TGAAAACCTAGCTGCCACTCAAGGGCTGGCCCATAT...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAAGGGACTTCAATGACTaGCCTCCAAAGCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKRDFND*PPKPQR
Trigger: CCTCTGAGGCTTTGGAGGTCAGTCATTGAAGTCCCT...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TGTGATGGCGCTCTAAGTGACCTCAGCAGAGTTCTTGAAAATGTTCATATCCTTCTCTGCACATGTAGGTaGGTTTGGATTTTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: CDGALSDLSRVLENVHILLCTCR*VWIFLA
Trigger: GGCCAGGAAAATCCAAACTCACCTACATGTGCAGAG...AAGGATATGAACATTTTCAAGAACTCTGCTGAGGTCACTTAGAGCGCCATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp CCAACTATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGTGTTCTGGTTACTaGAGGAATCCCGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: PTIPVDTPVPQHTANKATQCSGY*RNPGSL
Trigger: TAAAGATCCGGGATTCCTTCAGTAACCAGAACACTG...TGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAATAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCCAGTCAAGGTCTATaGATACAGACCCTCAACAAA +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVASSQGL*IQTLNK
Trigger: TTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGA...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACGCAGGTTTGTTGGTGTaGCTGATGGAGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHAGLLV*LMERSW
Trigger: CCAGCTCCTCTCCATCAGGCACACCAACAAACCTGC...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGATCTTCATAAAGCTGTaGATACTGGGGGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQIFIKL*ILGETS
Trigger: ACTGGTTTCCCCCAGTATGCACAGCTTTATGAAGAT...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTAAGTATTTAGACGCCTaGATAGAGCCTCAATGGCAT +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAKYLDA*IEPQWH
Trigger: ATGCCATTGAGGCTCTATGCAGGCGTCTAAATACTT...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCAGAGTCGTCATTGCCTaGCAAGTTGCTGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPRVVIA*QVAGGA
Trigger: TGCTCCTCCAGCAACTTGGCAGGCAATGACGACTCT...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGATGCTCAGGCGGCTaGTCATGGAGCTGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGRCSGG*SWSWKN
Trigger: ATTCTTCCAGCTCCATGAGCAGCCGCCTGAGCATCT...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCAGATGCTCAGGCGGCTaGTCATGGAGCTGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPRCSGG*SWSWKN
Trigger: ATTCTTCCAGCTCCATGAGCAGCCGCCTGAGCATCT...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAGAGCTCTGGAAACTGTaGCATCTCAGTCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKELWKL*HLSRCL
Trigger: CAGGCACCGACTGAGATGGCACAGTTTCCAGAGCTC...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCAGGAGTGAGTATTTCTaGAGCAGGTTCATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TESTLDIYCHSASNKHTFRSEYF*SRFIWA
Trigger: GGCCCAGATGAACCTGCTGCAGAAATACTCACTCCT...GAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp GAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCACAAGGAGTGAGTATTTCTaGAGCAGGTTCATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ESTLDIYCHSASNKHTFTRSEYF*SRFIWA
Trigger: GGCCCAGATGAACCTGCTGCAGAAATACTCACTCCT...TGTGAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp ACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCCCTGGAAAAGCTTCTTaGACTCGGCGATCATATGGG +
Preference number: 4 (lower is better)
Translates to: TESTLDIYCHSASNKHTFPGKAS*TRRSYG
Trigger: CCCATATGATCGCCGAGTGCAAGAAGCTTTTCCAGG...GAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGTCATCATTACCCAGGTaGCCGAGTGCTTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQSSLPR*PSASRV
Trigger: CACTCTGGAAGCACTCGGGCACCTGGGTAATGATGA...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGATCATCATTACCCAGGTaGCCGAGTGCTTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGSSLPR*PSASRV
Trigger: CACTCTGGAAGCACTCGGGCACCTGGGTAATGATGA...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGGGCCTTGGAATGATTTaGAGTCCGATTTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQGLGMI*SPIFPS
Trigger: TGAAGGAAAAATCGGACTGCAAATCATTCCAAGGCC...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACTGCTGCTGGTCTGCGTaGAGTTGGAAACGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHCCWSA*SWKRSS
Trigger: AGAGGAGCGTTTCCAACTCCACGCAGACCAGCAGCA...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAGAACACCGTGTCCTCTaGGTAGCTCTCGCGGTTCTT +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKEHRVL*VALAVL
Trigger: AAGAACCGCGAGAGCTACCCAGAGGACACGGTGTTC...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGGGCCGATGTGAGCTCTaGAAACTGTGCCATCTCAGT +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQGRCEL*KLCHLS
Trigger: ACTGAGATGGCACAGTTTCCAGAGCTCACATCGGCC...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGATGCAGCAGGTTCATCTaGGCCACAGACTGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGCSRFI*ATDWQL
Trigger: TAACTGCCAGTCTGTGGCCCAGATGAACCTGCTGCA...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GAGAAAACACATCCAAGAGTACCAACTATTCCAGTGGATACACCAGTCCCTCAAATTTCCTCGGGAACCTaGAAAAGCTTCTTGCACTCG +
Preference number: 4 (lower is better)
Translates to: EKTHPRVPTIPVDTPVPQISSGT*KSFLHS
Trigger: CGAGTGCAAGAAGCTTTTCCAGGTTCCCGAGGAAAT...TTGAGGGACTGGTGTATCCACTGGAATAGTTGGTACTCTTGGATGTGTTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCCAAACACCATGGTGGTaGAAGCGGTTGCGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPQTPWW*KRLRCF
Trigger: GAAGCAACGCAACCGCTTCCACCACCATGGTGTTTG...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCACAAAACAAACACCATGGTaGTGGAAGCGGTTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: ESTLDIYCHSASNKHTFTKQTPW*WKRLRC
Trigger: GCAACGCAACCGCTTCCACCACCATGGTGTTTGTTT...TGTGAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTATACCAACTATTCCAGTaGATACACCAGTCCCTCAAC +
Preference number: 4 (lower is better)
Translates to: IPVDTPVPQHTANKATQVYQLFQ*IHQSLN
Trigger: GTTGAGGGACTGGTGTATCCACTGGAATAGTTGGTA...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACAATGGACAAGGGTGTTaGGCCCCCTTTCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHNGQGC*APFLGG
Trigger: TCCACCCAGAAAGGGGGCCCAACACCCTTGTCCATT...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp TGTGATGGCGCTCTAAGTGACCTCAGCAGAGTTCTTGAAAATGTTCATATCCTTATCATGGCTCTATTCTaGGCAGTTTCACGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: CDGALSDLSRVLENVHILIMALF*AVSRSV
Trigger: CACACTGCGTGAAACTGCTCAGAATAGAGCCATGAT...AAGGATATGAACATTTTCAAGAACTCTGCTGAGGTCACTTAGAGCGCCATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTAATCAAAGAAGCGAATaGGTTCTGTCATTTCACCAC +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVANQRSE*VLSFHH
Trigger: GTGGTGAAATGACAGAACTCATTCGCTTCTTTGATT...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAACATCCTTTGAAAGATaGCCCATTGGCCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGTSFER*PIGLPG
Trigger: TCCTGGGAGGCCAATGGGTCATCTTTCAAAGGATGT...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCATTTTCTATGTCCTaGTCAAGCTGGTCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVEAFSMS*SSWSSF
Trigger: GAAACTGGACCAGCTTGATCAGGACATAGAAAATGC...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp CCAACTATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACATTCTCTGAAATACCTTaGATAGCCGTAGTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: PTIPVDTPVPQHTANKATFSEIP*IAVVLG
Trigger: ACCCAAGACTACGGCTATTCAAGGTATTTCAGAGAA...TGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAATAGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCAAGTCCATTTGCCACTaGTGGCACAAGGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPKSICH*WHKAHP
Trigger: AGGATGAGCCTTGTGCCATCAGTGGCAAATGGACTT...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAGCTTTGTGCTTGCTGTaGTGGGAGCTCTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKALCLL*WELLSF
Trigger: GAAGCTCAAGAGCTCCCATCACAGCAAGCACAAAGC...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAAGATCTCCACGCAGTTaGGCTGCTTCAGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKRSPRS*AASASP
Trigger: AGGAGAAGCTGAAGCAGCTCAACTGCGTGGAGATCT...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACTTGTTAAATGTTGACTaGTTGAAAGGATCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: DTPVPQHTANKATQVRIHLLNVD*LKGSKP
Trigger: GGGCTTCGATCCTTTCAATCAGTCAACATTTAACAA...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTTGTTAAATGTTGACTaGTTGAAAGGATCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQLLNVD*LKGSKP
Trigger: GGGCTTCGATCCTTTCAATCAGTCAACATTTAACAA...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGAGAAACTGCCATTGGTaGGAGCTTTGGGGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQRNCHW*ELWGKC
Trigger: GCACTTTCCCCAAAGCTCTCACCAATGGCAGTTTCT...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAAACTTCTCCGACCACTaGTTGACTATCCGCTGCATC +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKNFSDH*LTIRCI
Trigger: GATGCAGCGGATAGTCAATCAGTGGTCGGAGAAGTT...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACGTAGTGATACAGAGTTaGGGCTTGGCCGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHVVIQS*GLADVS
Trigger: GCTCACATCGGCCAAGCCTCAACTCTGTATCACTAC...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGGTGTTGGTAGTCAGCTaGGTCATCATTACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQVLVVS*VIITQV
Trigger: CACCTGGGTAATGATGACTCAGCTGACTACCAACAC...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAACAGGTGCGCGATCGTaGTCCACAGAGGTTAGTAAA +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKTGARS*STEVSK
Trigger: TTTACTAACCTCTGTGGATCACGATCGCGCACCTGT...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTATCCAGTCAAGGTCTATaGATACAGACCCTCAACAAA +
Preference number: 4 (lower is better)
Translates to: IPVDTPVPQHTANKATQVSSQGL*IQTLNK
Trigger: TTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGA...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGTCCTCATCAGAAACATaGACTAGTGTTTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVSSSET*TSVSVL
Trigger: CAGCACAGAAACACTAGTGCATGTTTCTGATGAGGA...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTGTTCAAAGTATCCACTaGATTTACTTTGGGTGCATC +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAVQSIH*IYFGCI
Trigger: GATGCACCCAAAGTAAATGCAGTGGATACTTTGAAC...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAAGAGTCGTCATTGCCTaGCAAGTTGCTGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKRVVIA*QVAGGA
Trigger: TGCTCCTCCAGCAACTTGGCAGGCAATGACGACTCT...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGGAGTGAGTATTTCTaGAGCAGGTTCATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGRSEYF*SRFIWA
Trigger: GGCCCAGATGAACCTGCTGCAGAAATACTCACTCCT...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAACTGCTTCAGCATGTCTaGCACGTCATAAGCAGACTG +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKLLQHV*HVISRL
Trigger: CAGTCTGCTTATGACGTGGCAGACATGCTGAAGCAG...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGACTGCTTCAGCATGTCTaGCACGTCATAAGCAGACTG +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGLLQHV*HVISRL
Trigger: CAGTCTGCTTATGACGTGGCAGACATGCTGAAGCAG...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCCCTGGAAAAGCTTCTTaGACTCGGCGATCATATGGG +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPPGKAS*TRRSYG
Trigger: CCCATATGATCGCCGAGTGCAAGAAGCTTTTCCAGG...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp GAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCACATGGAAGCGGTTGCGTTaGTTCAGTGATCACCTAGAT +
Preference number: 4 (lower is better)
Translates to: ESTLDIYCHSASNKHTFTWKRLR*FSDHLD
Trigger: ATCTAGGTGATCACTGAAGCAACGCAACCGCTTCCA...TGTGAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCTAATCTGATGCCCTaGCCCAAAATTCTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVASNLMP*PKILQR
Trigger: TCTTTGAAGAATTTTGGGGCAGGGCATCAGATTAGA...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGATGGAGAGAATCTCCGTaGTTCCTGAACCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGWRESP*FLNLHQ
Trigger: CTGGTGAAGGTTCAGGAAGCACGGAGATTCTCTCCA...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGGTGTTGTTTCACTGTTaGGTGATCAGGTACTCATCA +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVVLFHC*VIRYSS
Trigger: TGATGAGTACCTGATCACGCAACAGTGAAACAACAC...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520226.5
CDS-3UTR CCA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTGGCTGTCCCATCCAGTaGGTCACATGTTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: DTGTHTLISQENEVSSLSGCPIQ*VTCSSQ
Trigger: CTGGGAAGAACATGTGACCCACTGGATGGGACAGCC...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp GAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCACAAAGGAGCCTGCTCCTTaGATCATATGTTGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: ESTLDIYCHSASNKHTFTKEPAP*IICWPD
Trigger: ATCAGGCCAACATATGATCCAAGGAGCAGGCTCCTT...TGTGAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACCAGCTGACATTCCATTaGGGCAGGAAGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNQLTFH*GRKEAA
Trigger: TGCAGCCTCCTTCCTGCCCCAATGGAATGTCAGCTG...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAATACTGGAGTGGAAGATaGGAGGTCCGTGGACTCAGT +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKYWSGR*EVRGLS
Trigger: ACTGAGTCCACGGACCTCCCATCTTCCACTCCAGTA...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCCCAAGGAAATATCGATaGGGAACAGGAAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCPRKYR*GTGNLH
Trigger: ATGAAGATTTCCTGTTCCCCATCGATATTTCCTTGG...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTGACCAGGTCTTGTTTTaGAGAAAAGACATCAAACTC +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVADQVLF*RKDIKL
Trigger: GAGTTTGATGTCTTTTCTCCAAAACAAGACCTGGTC...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGTGGTCTGCGTGGAGTTaGAAACGCTCCTCTTTCGTA +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQWSAWS*KRSSFV
Trigger: TACGAAAGAGGAGCGTTTCCAACTCCACGCAGACCA...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAATGCAGCAGGTTCATCTaGGCCACAGACTGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKCSRFI*ATDWQL
Trigger: TAACTGCCAGTCTGTGGCCCAGATGAACCTGCTGCA...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GAGAAAACACATCCAAGAGTACCAACTATTCCAGTGGATACACCAGTCCCTCAATTGGTTTCAGTGTTCTaGTTACTGAAGGAATCCCGG +
Preference number: 4 (lower is better)
Translates to: EKTHPRVPTIPVDTPVPQLVSVF*LLKESR
Trigger: CCGGGATTCCTTCAGTAACCAGAACACTGAAACCAA...TTGAGGGACTGGTGTATCCACTGGAATAGTTGGTACTCTTGGATGTGTTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp GACCCTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTTACAGAAGAGGTTCGTaGAAAAGGAATATGCTTAAT +
Preference number: 4 (lower is better)
Translates to: DPDSACKHLSAVARCRHPYRRGS*KRNMLN
Trigger: ATTAAGCATATTCCTTTTCCACGAACCTCTTCTGTA...AGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTTACAGGGATTTCCTTaGGACACACATAGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: AKVLETNTMVVEAVALLQLQGFP*DTHSFL
Trigger: TAGGAAACTATGTGTGTCCCAAGGAAATCCCTGTAA...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAACTTGGTTACTTTGTATaGTGGGCAGTGCCTTTTCTA +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVELGYFV*WAVPFL
Trigger: TAGAAAAGGCACTGCCCATCATACAAAGTAACCAAG...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp ACATATTTTGATGGTTTGACCAAGTGGGTAGTCGTTGAATTACACATCTGCATACAGGCCATTTTCAGCTaGCATTCCATTGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: TYFDGLTKWVVVELHICIQAIFS*HSIGAG
Trigger: TCCTGCCCCAATGGAATGTCAGCTGAAAATGGCCTG...TATGCAGATGTGTAATTCAACGACTACCCACTTGGTCAAACCATCAAAATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS-3UTR TCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAATTCTCTTACGAAGTCTaGCTTGGTTATCTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVEFSYEV*LGYLWV
Trigger: AACCCACAGATAACCAAGTCAGACTTCGTAAGAGAA...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACGAGAGGAGCTGGTGCTaGGGGCATTTTCTATGTCCT +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNERSWC*GHFLCP
Trigger: AGGACATAGAAAATGCCCTCAGCACCAGCTCCTCTC...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR TCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGGTTTGTTGGTGTGCCTaGTGGAGAGGAGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQVCWCA*WRGAGA
Trigger: AGCACCAGCTCCTCTCCATCAGGCACACCAACAAAC...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR TCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAAATCATGCTCTCTCTTaGCCAAGGAAATATCGATGG +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVENHALS*PRKYRW
Trigger: CCATCGATATTTCCTTGGTCAAGAGAGAGCATGATT...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATCACTTCGTTTCCGATaGGGACTAATTTCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: DTESTLDIYCHSASNKHTSLRFR*GLISSF
Trigger: GAAGCTAGAAATTAGTCCTCATCGGAAACGAAGTGA...TGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAATCACTTCGTTTCCGATaGGGACTAATTTCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVESLRFR*GLISSF
Trigger: GAAGCTAGAAATTAGTCCTCATCGGAAACGAAGTGA...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTAGATCTCCACGCAGTTaGGCTGCTTCAGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: DTGTHTLISQENEVSSLSRSPRS*AASASP
Trigger: AGGAGAAGCTGAAGCAGCTCAACTGCGTGGAGATCT...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCCACGTTGTTAAATGTTaGCTGATTGAAAGGATCGAA +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCHVVKC*LIERIE
Trigger: TTCGATCCTTTCAATCAGTCAACATTTAACAACGTG...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTCACGTTGTTAAATGTTaGCTGATTGAAAGGATCGAA +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAHVVKC*LIERIE
Trigger: TTCGATCCTTTCAATCAGTCAACATTTAACAACGTG...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACAACTTCTCCGACCACTaGTTGACTATCCGCTGCATC +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHNFSDH*LTIRCI
Trigger: GATGCAGCGGATAGTCAATCAGTGGTCGGAGAAGTT...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTGTAGTGATACAGAGTTaGGGCTTGGCCGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: DTGTHTLISQENEVSSLSVVIQS*GLADVS
Trigger: GCTCACATCGGCCAAGCCTCAACTCTGTATCACTAC...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCACTGTCCTTCGTAGTTaGCACAGTCTATGGCACCTT +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPTVLRS*HSLWHL
Trigger: AAGGTGCCATAGACTGTGTCAACTACGAAGGACAGT...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAACTGTCCTTCGTAGTTaGCACAGTCTATGGCACCTT +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGTVLRS*HSLWHL
Trigger: AAGGTGCCATAGACTGTGTCAACTACGAAGGACAGT...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAGTGTTGGTAGTCAGCTaGGTCATCATTACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKVLVVS*VIITQV
Trigger: CACCTGGGTAATGATGACTCAGCTGACTACCAACAC...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTAATTTCGATCACTTTTaGATCCAACAGGTCTACATC +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVANFDHF*IQQVYI
Trigger: GATGTAGACCTGTTGGATTCAAAAGTGATCGAAATT...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACTCTGCACATGTAGGTaGGTTTGGATTTTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKLCTCR*VWIFLA
Trigger: GGCCAGGAAAATCCAAACTCACCTACATGTGCAGAG...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAGTTGCGTTGCTTCAGTaGTCACCTAGATTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKVALLQ*SPRFGV
Trigger: GACACCAAATCTAGGTGATCACTGAAGCAACGCAAC...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGGTTGCGTTGCTTCAGTaGTCACCTAGATTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQVALLQ*SPRFGV
Trigger: GACACCAAATCTAGGTGATCACTGAAGCAACGCAAC...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp GACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATCCAGTCAAGGTCTATaGATACAGACCCTCAACAAA +
Preference number: 4 (lower is better)
Translates to: DTESTLDIYCHSASNKHTSSQGL*IQTLNK
Trigger: TTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGA...TGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp GACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACACAGGTACGCATACACTaGTATCACAAGAGAATGAAG +
Preference number: 4 (lower is better)
Translates to: DTESTLDIYCHSASNKHTQVRIH*YHKRMK
Trigger: CTTCATTCTCTTGTGATATCAGTGTATGCGTACCTG...TGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTCCATGTATATCTTCATaGGGAACACTGATATCCAAA +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAPCISS*GTLISK
Trigger: TTTGGATATCAGTGTTCCTCATGAAGATATACATGG...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp CCAACTATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACCTCAGCAGAGTTCTTaGAAATGTTCATATCCTTCA +
Preference number: 4 (lower is better)
Translates to: PTIPVDTPVPQHTANKATPQQSS*KCSYPS
Trigger: TGAAGGATATGAACATTTTCAAGAACTCTGCTGAGG...TGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAATAGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp CTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTCTCACAATTGTTTCTCAGGTaGAATATCTTTCACGTTCAA +
Preference number: 4 (lower is better)
Translates to: LTLLASIFLLLHVVVILSQLFLR*NIFHVQ
Trigger: TTGAACGTGAAAGATATTGCACCTGAGAAACAATTG...TGAGAGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTTTAATTGTAAACACTaGATGCCATCTTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAFNCKH*MPSSAL
Trigger: CAAGGCAGAAGATGGCATGCAGTGTTTACAATTAAA...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGGCAGGTTTGTTGGTGTaGCTGATGGAGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQAGLLV*LMERSW
Trigger: CCAGCTCCTCTCCATCAGGCACACCAACAAACCTGC...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR GCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGTCCAGATCAGGAACGTaGCGCCGCAGGTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQSRSGT*RRRFVG
Trigger: ACCAACAAACCTGCGGCGGCACGTTCCTGATCTGGA...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR GCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAAAGTATTTAGACGCCTaGATAGAGCCTCAATGGCAT +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVEKYLDA*IEPQWH
Trigger: ATGCCATTGAGGCTCTATGCAGGCGTCTAAATACTT...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTCGAAAGAGTCGTCATTaGCTGCCAAGTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: DTGTHTLISQENEVSSLSRKSRH*LPSCWR
Trigger: CCTCCAGCAACTTGGCAGGCAATGACGACTCTTTCG...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCTGGAGCTGGAAGAATTaGGTCTCTTCAGTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPWSWKN*VSSVPW
Trigger: CCAAGGAACTGAAGAGACGCAATTCTTCCAGCTCCA...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp GAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCACAGTTTTCTTTTACGGCTaGTGTGACATCGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: ESTLDIYCHSASNKHTFTVFFYG*CDIAQE
Trigger: TTCCTGAGCGATGTCACAGCAGCCGTAAAAGAAAAC...TGTGAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR GCA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCCTTTACAACTTCAGCTaGACACAAATGTCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCLYNFS*TQMSKR
Trigger: TCTTTTGGACATTTGTGTGCAGCTGAAGTTGTAAAG...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCTGGAAGCGGTTGCGTTaGTTCAGTGATCACCTAGAT +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPWKRLR*FSDHLD
Trigger: ATCTAGGTGATCACTGAAGCAACGCAACCGCTTCCA...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAGACCCTGACTCTGCTTaGAAGCATCTTTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGDPDSA*KHLSAV
Trigger: AACAGCAGAAAGATGCTTGCAAGCAGAGTCAGGGTC...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGGGCTGTCCCATCCAGTaGGTCACATGTTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQGCPIQ*VTCSSQ
Trigger: CTGGGAAGAACATGTGACCCACTGGATGGGACAGCC...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CCA 90 bp ACATATTTTGATGGTTTGACCAAGTGGGTAGTCGTTGAATTACACATCTGCATACTGTGGGTTCCTGGGTaGCCAGGGTCTCCTTTAATT +
Preference number: 4 (lower is better)
Translates to: TYFDGLTKWVVVELHICILWVPG*PGSPLI
Trigger: AATTAAAGGAGACCCTGGCCACCCAGGAACCCACAG...TATGCAGATGTGTAATTCAACGACTACCCACTTGGTCAAACCATCAAAATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS-3UTR CCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACTTATCTGTGGGTTCCTaGGTGGCCAGGGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNLSVGS*VARVSF
Trigger: AAAGGAGACCCTGGCCACCCAGGAACCCACAGATAA...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACTACTGGAGTGGAAGATaGGAGGTCCGTGGACTCAGT +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNYWSGR*EVRGLS
Trigger: ACTGAGTCCACGGACCTCCCATCTTCCACTCCAGTA...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACAATTGGCTACTGGAGTaGAAGATGGGAGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNNWLLE*KMGGPW
Trigger: CCACGGACCTCCCATCTTCCACTCCAGTAGCCAATT...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CCA 90 bp GAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCACAGTTTGGTTCCAGAATTaGCTACTGGAGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: ESTLDIYCHSASNKHTFTVWFQN*LLEWKM
Trigger: CATCTTCCACTCCAGTAGCCAATTCTGGAACCAAAC...TGTGAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGGTCTCTTCAGTTCCTTaGGGCTGTCGCTACTGTTTT +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQVSSVP*GCRYCF
Trigger: AAAACAGTAGCGACAGCCCCAAGGAACTGAAGAGAC...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAGTCTCTTCAGTTCCTTaGGGCTGTCGCTACTGTTTT +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGVSSVP*GCRYCF
Trigger: AAAACAGTAGCGACAGCCCCAAGGAACTGAAGAGAC...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAGTCTCTTCAGTTCCTTaGGGCTGTCGCTACTGTTTT +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKVSSVP*GCRYCF
Trigger: AAAACAGTAGCGACAGCCCCAAGGAACTGAAGAGAC...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACGGCTGCTCATGGAGCTaGAAGAATTGCGTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHGCSWS*KNCVSS
Trigger: TGAAGAGACGCAATTCTTCCAGCTCCATGAGCAGCC...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACGGCCAGGTTGGTTaGGGTCATCTGGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKHGQVG*GHLVFF
Trigger: AAAGAAAACCAGATGACCCCAACCAACCTGGCCGTG...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGATTTCCTCGGGAACCTaGAAAAGCTTCTTGCACTCG +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQISSGT*KSFLHS
Trigger: CGAGTGCAAGAAGCTTTTCCAGGTTCCCGAGGAAAT...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAAAACAAACACCATGGTaGTGGAAGCGGTTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKKQTPW*WKRLRC
Trigger: GCAACGCAACCGCTTCCACCACCATGGTGTTTGTTT...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACAAACAAACACCATGGTaGTGGAAGCGGTTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHKQTPW*WKRLRC
Trigger: GCAACGCAACCGCTTCCACCACCATGGTGTTTGTTT...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TGTGATGGCGCTCTAAGTGACCTCAGCAGAGTTCTTGAAAATGTTCATATCCTTGCGTCGTTTCCTAACTaGACCTTTGTTGGAGAGAAT +
Preference number: 4 (lower is better)
Translates to: CDGALSDLSRVLENVHILASFPN*TFVGEN
Trigger: ATTCTCTCCAACAAAGGTCCAGTTAGGAAACGACGC...AAGGATATGAACATTTTCAAGAACTCTGCTGAGGTCACTTAGAGCGCCATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTCTCAGCTCTGATCCATaGCAGCAGTCAGGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: DTGTHTLISQENEVSSLSLSSDP*QQSGSE
Trigger: TTCACTACCTGACTGCTGTCATGGATCAGAGCTGAG...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGCAGGCCATTTTCAGCTaGCATTCCATTGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQQAIFS*HSIGAG
Trigger: TCCTGCCCCAATGGAATGTCAGCTGAAAATGGCCTG...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR TCA 90 bp ACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCTCGTGTCTGATTTACTaGAATGGTATCTGCTCCACT +
Preference number: 4 (lower is better)
Translates to: TESTLDIYCHSASNKHTFSCLIY*NGICST
Trigger: AGTGGAGCAGATACCATTTCAGTAAATCAGACACGA...GAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAATTGTTAAATGTTGACTaGTTGAAAGGATCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVELLNVD*LKGSKP
Trigger: GGGCTTCGATCCTTTCAATCAGTCAACATTTAACAA...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGCACGTTGTTAAATGTTaGCTGATTGAAAGGATCGAA +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVHVVKC*LIERIE
Trigger: TTCGATCCTTTCAATCAGTCAACATTTAACAACGTG...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAACTTTTACGGCTGCTGTaGCATCGCTCAGGAAATAAA +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKLLRLL*HRSGNK
Trigger: TTTATTTCCTGAGCGATGTCACAGCAGCCGTAAAAG...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCCTTTTACGGCTGCTGTaGCATCGCTCAGGAAATAAA +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPLLRLL*HRSGNK
Trigger: TTTATTTCCTGAGCGATGTCACAGCAGCCGTAAAAG...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGAATTTCGATCACTTTTaGATCCAACAGGTCTACATC +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVNFDHF*IQQVYI
Trigger: GATGTAGACCTGTTGGATTCAAAAGTGATCGAAATT...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp CCAACTATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACAAATTTCGATCACTTTTaGATCCAACAGGTCTACATC +
Preference number: 4 (lower is better)
Translates to: PTIPVDTPVPQHTANKATNFDHF*IQQVYI
Trigger: GATGTAGACCTGTTGGATTCAAAAGTGATCGAAATT...TGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAATAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTACAGGTGCGCGATCGTaGTCCACAGAGGTTAGTAAA +
Preference number: 4 (lower is better)
Translates to: DTGTHTLISQENEVSSLSTGARS*STEVSK
Trigger: TTTACTAACCTCTGTGGATCACGATCGCGCACCTGT...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAACAGTGTTCTGGTTACTaGAGGAATCCCGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKQCSGY*RNPGSL
Trigger: TAAAGATCCGGGATTCCTTCAGTAACCAGAACACTG...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAGTTGCGTTGCTTCAGTaGTCACCTAGATTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKVALLQ*SPRFGV
Trigger: GACACCAAATCTAGGTGATCACTGAAGCAACGCAAC...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp TGTGATGGCGCTCTAAGTGACCTCAGCAGAGTTCTTGAAAATGTTCATATCCTTAGTTTGGCCTTGGAATaGTTTGCAGTCCGATTTTTC +
Preference number: 4 (lower is better)
Translates to: CDGALSDLSRVLENVHILSLALE*FAVRFF
Trigger: GAAAAATCGGACTGCAAATCATTCCAAGGCCAAACT...AAGGATATGAACATTTTCAAGAACTCTGCTGAGGTCACTTAGAGCGCCATCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp GGCCTTGGAATGATTTGCAGTCCGATTTTTCCTTCAGCAAATCGCTCTTTTGATTGGCCTGATGTTTTCTaGCCTTGGGTATTTAAAACC +
Preference number: 4 (lower is better)
Translates to: GLGMICSPIFPSANRSFDWPDVF*PWVFKT
Trigger: GGTTTTAAATACCCAAGGGCAGAAAACATCAGGCCA...ATCAAAAGAGCGATTTGCTGAAGGAAAAATCGGACTGCAAATCATTCCAAGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACCTGCATGCCATCTTCTaGCTTGACCTTTGGTGGACT +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNLHAIF*LDLWWT
Trigger: AGTCCACCAAAGGTCAAGGCAGAAGATGGCATGCAG...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR GCA 90 bp TTTACATATTTTGATGGTTTGACCAAGTGGGTAGTCGTTGAATTACACATCTGCCTGCATGCCATCTTCTaGCTTGACCTTTGGTGGACT +
Preference number: 4 (lower is better)
Translates to: FTYFDGLTKWVVVELHICLHAIF*LDLWWT
Trigger: AGTCCACCAAAGGTCAAGGCAGAAGATGGCATGCAG...GCAGATGTGTAATTCAACGACTACCCACTTGGTCAAACCATCAAAATATGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS-3UTR GCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGGTTTTCTTTTACGGCTaGTGTGACATCGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQVFFYG*CDIAQE
Trigger: TTCCTGAGCGATGTCACAGCAGCCGTAAAAGAAAAC...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCTCGAGCAGGATGAGGTaGCATACTGTTTTGGACATA +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPSSRMR*HTVLDI
Trigger: TATGTCCAAAACAGTATGGCACCTCATCCTGCTCGA...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACTGGAAGCGGTTGCGTTaGTTCAGTGATCACCTAGAT +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHWKRLR*FSDHLD
Trigger: ATCTAGGTGATCACTGAAGCAACGCAACCGCTTCCA...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACGATGTTTTCTGCCCTTaGGTATTTAAAACCTGTTTA +
Preference number: 4 (lower is better)
Translates to: DTPVPQHTANKATQVRIHDVFCP*VFKTCL
Trigger: TAAACAGGTTTTAAATACCCAAGGGCAGAAAACATC...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGCTGTGGGTTCCTGGGTaGCCAGGGTCTCCTTTAATT +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQLWVPG*PGSPLI
Trigger: AATTAAAGGAGACCCTGGCCACCCAGGAACCCACAG...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACAAGATGGGAGGTCCGTaGACTCAGTGTCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNKMGGP*TQCQKT
Trigger: TGTCTTCTGACACTGAGTCCACGGACCTCCCATCTT...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACTCCAGAATTGGCTACTaGAGTGGAAGATGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNSRIGY*SGRWEV
Trigger: GACCTCCCATCTTCCACTCCAGTAGCCAATTCTGGA...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACTCTTGCTGTCCCTTTaGAAAGTCCATTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKLLLSL*KVHLPL
Trigger: CAGTGGCAAATGGACTTTCCAAAGGGACAGCAAGAG...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGATTGGTTTCAGTGTTCTaGTTACTGAAGGAATCCCGG +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGLVSVF*LLKESR
Trigger: CCGGGATTCCTTCAGTAACCAGAACACTGAAACCAA...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAAAACTTCACTGGTTTaGGTTGGTTTTCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: CLSVPDTESTLDIYCHSAKTSLV*VGFLLV
Trigger: AACAAGAAGAAAACCAACCCAAACCAGTGAAGTTTT...GGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGCTCAGCTCTGATCCATaGCAGCAGTCAGGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQLSSDP*QQSGSE
Trigger: TTCACTACCTGACTGCTGTCATGGATCAGAGCTGAG...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR TCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGACATCCTTTGAAAGATaGCCCATTGGCCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQTSFER*PIGLPG
Trigger: TCCTGGGAGGCCAATGGGTCATCTTTCAAAGGATGT...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR TCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACTTCGTCCACATCCTTTaGAAGATGACCCATTGGCCT +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNFVHIL*KMTHWP
Trigger: AGGCCAATGGGTCATCTTTCAAAGGATGTGGACGAA...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR TCA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTTCCACTTTCAGATCCTaGTTCCAGATCAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: DTGTHTLISQENEVSSLSSTFRS*FQIRNV
Trigger: CACGTTCCTGATCTGGAATCAGGATCTGAAAGTGGA...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACTCCACTTTCAGATCCTaGTTCCAGATCAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNSTFRS*FQIRNV
Trigger: CACGTTCCTGATCTGGAATCAGGATCTGAAAGTGGA...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR TCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGAATCATGCTCTCTCTTaGCCAAGGAAATATCGATGG +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQNHALS*PRKYRW
Trigger: CCATCGATATTTCCTTGGTCAAGAGAGAGCATGATT...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAAATTTCGATCACTTTTaGATCCAACAGGTCTACATC +
Preference number: 4 (lower is better)
Translates to: PILQGLAKVLETNTMVVENFDHF*IQQVYI
Trigger: GATGTAGACCTGTTGGATTCAAAAGTGATCGAAATT...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAATCTTCATAAAGCTGTaGATACTGGGGGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKIFIKL*ILGETS
Trigger: ACTGGTTTCCCCCAGTATGCACAGCTTTATGAAGAT...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCATCTTCATAAAGCTGTaGATACTGGGGGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPIFIKL*ILGETS
Trigger: ACTGGTTTCCCCCAGTATGCACAGCTTTATGAAGAT...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAGTTTTCTTTTACGGCTaGTGTGACATCGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKVFFYG*CDIAQE
Trigger: TTCCTGAGCGATGTCACAGCAGCCGTAAAAGAAAAC...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACTTGCAAGCATCTTTCTaGTGTTGCACGTTGTCGTCA +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHLQASF*CCTLSS
Trigger: TGACGACAACGTGCAACAGCAGAAAGATGCTTGCAA...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCTCGTGGTTGAGATCATaGCTCTATTCTGAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPSWLRS*LYSEQF
Trigger: AAACTGCTCAGAATAGAGCCATGATCTCAACCACGA...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACAAGGAGCCTGCTCCTTaGATCATATGTTGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNKEPAP*IICWPD
Trigger: ATCAGGCCAACATATGATCCAAGGAGCAGGCTCCTT...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CCA 90 bp ACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCTTCTGCCTTGACCTTTaGTGGACTTTTGTTTTGATG +
Preference number: 4 (lower is better)
Translates to: TESTLDIYCHSASNKHTFFCLDL*WTFVLM
Trigger: CATCAAAACAAAAGTCCACCAAAGGTCAAGGCAGAA...GAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp GAGAAAACACATCCAAGAGTACCAACTATTCCAGTGGATACACCAGTCCCTCAATCTGATTTACTGAAATaGTATCTGCTCCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: EKTHPRVPTIPVDTPVPQSDLLK*YLLHFQ
Trigger: CTGAAAGTGGAGCAGATACCATTTCAGTAAATCAGA...TTGAGGGACTGGTGTATCCACTGGAATAGTTGGTACTCTTGGATGTGTTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGCAAATCTTTCTGATCTaGTTTGCCCAAACTTTGTTT +
Preference number: 4 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVQIFLI*FAQTLF
Trigger: AAACAAAGTTTGGGCAAACCAGATCAGAAAGATTTG...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACTTGGTTTCAGTGTTCTaGTTACTGAAGGAATCCCGG +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHLVSVF*LLKESR
Trigger: CCGGGATTCCTTCAGTAACCAGAACACTGAAACCAA...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACTTTGTGTTAGGATCATaGTGTCCGGCTTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHFVLGS*CPASFC
Trigger: GCAGAAAGAAGCCGGACACCATGATCCTAACACAAA...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358919.6
CDS-3UTR TCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGATCATGGCTCTATTCTaGGCAGTTTCACGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQIMALF*AVSRSV
Trigger: CACACTGCGTGAAACTGCTCAGAATAGAGCCATGAT...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR TCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACGGTTTCCTTCGTTGCTaGGCAATTACAGCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNGFLRC*AITAEL
Trigger: TAACTCTGCTGTAATTGCTCAGCAACGAAGGAAACC...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR TCA 90 bp TGTGATGGCGCTCTAAGTGACCTCAGCAGAGTTCTTGAAAATGTTCATATCCTTTTTGTTTTGATGTTGTaGAAAACCACTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CDGALSDLSRVLENVHILFVLML*KTTLLQ
Trigger: CTGGAGAAGAGTGGTTTTTCACAACATCAAAACAAA...AAGGATATGAACATTTTCAAGAACTCTGCTGAGGTCACTTAGAGCGCCATCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAAAACACACTTCTCTTTaGGGTCCACATTTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKKHTSL*GPHLEL
Trigger: CAACTCTAAATGTGGACCGCAAAGAGAAGTGTGTTT...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACAAGTATTTAGACGCCTaGATAGAGCCTCAATGGCAT +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHKYLDA*IEPQWH
Trigger: ATGCCATTGAGGCTCTATGCAGGCGTCTAAATACTT...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp ACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCCTTTACAACTTCAGCTaGACACAAATGTCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: TESTLDIYCHSASNKHTFLYNFS*TQMSKR
Trigger: TCTTTTGGACATTTGTGTGCAGCTGAAGTTGTAAAG...GAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACTTACGAAGTCTGACTTaGTTATCTGTGGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNLRSLT*LSVGSW
Trigger: CCAGGAACCCACAGATAACCAAGTCAGACTTCGTAA...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CCA 90 bp TTTACATATTTTGATGGTTTGACCAAGTGGGTAGTCGTTGAATTACACATCTGCTTACGAAGTCTGACTTaGTTATCTGTGGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FTYFDGLTKWVVVELHICLRSLT*LSVGSW
Trigger: CCAGGAACCCACAGATAACCAAGTCAGACTTCGTAA...GCAGATGTGTAATTCAACGACTACCCACTTGGTCAAACCATCAAAATATGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS-3UTR CCA 90 bp GGCCTTGGAATGATTTGCAGTCCGATTTTTCCTTCAGCAAATCGCTCTTTTGATAATCACAAGCTTCCTTaGCTTCAATTTCAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: GLGMICSPIFPSANRSFDNHKLP*LQFQPF
Trigger: AAAAGGCTGAAATTGAAGCCAAGGAAGCTTGTGATT...ATCAAAAGAGCGATTTGCTGAAGGAAAAATCGGACTGCAAATCATTCCAAGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCCCAAGGAAATATCGATaGGGAACAGGAAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPPRKYR*GTGNLH
Trigger: ATGAAGATTTCCTGTTCCCCATCGATATTTCCTTGG...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAGACCAGGTCTTGTTTTaGAGAAAAGACATCAAACTC +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGDQVLF*RKDIKL
Trigger: GAGTTTGATGTCTTTTCTCCAAAACAAGACCTGGTC...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCGACCAGGTCTTGTTTTaGAGAAAAGACATCAAACTC +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPDQVLF*RKDIKL
Trigger: GAGTTTGATGTCTTTTCTCCAAAACAAGACCTGGTC...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGGACCAGGTCTTGTTTTaGAGAAAAGACATCAAACTC +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQDQVLF*RKDIKL
Trigger: GAGTTTGATGTCTTTTCTCCAAAACAAGACCTGGTC...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR TCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGTTCCCATTTCGTGGTTaGGATCATGGCTCTATTCTG +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQFPFRG*DHGSIL
Trigger: CAGAATAGAGCCATGATCTCAACCACGAAATGGGAA...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR TCA 90 bp TTTACATATTTTGATGGTTTGACCAAGTGGGTAGTCGTTGAATTACACATCTGCTTCTCTTACGAAGTCTaGCTTGGTTATCTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: FTYFDGLTKWVVVELHICFSYEV*LGYLWV
Trigger: AACCCACAGATAACCAAGTCAGACTTCGTAAGAGAA...GCAGATGTGTAATTCAACGACTACCCACTTGGTCAAACCATCAAAATATGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS-3UTR TCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGGCATTTTCTATGTCCTaGTCAAGCTGGTCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQAFSMS*SSWSSF
Trigger: GAAACTGGACCAGCTTGATCAGGACATAGAAAATGC...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR TCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACTTCTCTGAAATACCTTaGATAGCCGTAGTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNFSEIP*IAVVLG
Trigger: ACCCAAGACTACGGCTATTCAAGGTATTTCAGAGAA...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR TCA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTCAGGTACGCATACACTaGTATCACAAGAGAATGAAG +
Preference number: 4 (lower is better)
Translates to: DTGTHTLISQENEVSSLSQVRIH*YHKRMK
Trigger: CTTCATTCTCTTGTGATATCAGTGTATGCGTACCTG...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTCTTTGCTCATCTTGGTaGGAAAACACATCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: DTGTHTLISQENEVSSLSLCSSW*ENTSKS
Trigger: ACTCTTGGATGTGTTTTCTCACCAAGATGAGCAAAG...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR TCA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGACATTACAGTAAAACCTaGATAAAGACCACCCTTCTA +
Preference number: 4 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGHYSKT*IKTTLL
Trigger: TAGAAGGGTGGTCTTTATTCAGGTTTTACTGTAATG...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR TCA 90 bp ACATATTTTGATGGTTTGACCAAGTGGGTAGTCGTTGAATTACACATCTGCATACAAGTGGGTAGTCGTTaGATTACACATCTGCATAAC +
Preference number: 4 (lower is better)
Translates to: TYFDGLTKWVVVELHICIQVGSR*ITHLHN
Trigger: GTTATGCAGATGTGTAATTCAACGACTACCCACTTG...TATGCAGATGTGTAATTCAACGACTACCCACTTGGTCAAACCATCAAAATATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS-3UTR GCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACTTTTCCATACTTGCCTaGAAGCTGTCAGCTACTAGT +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNFSILA*KLSATS
Trigger: ACTAGTAGCTGACAGCTTGCAGGCAAGTATGGAAAA...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR GCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGGCAGTCCTCTGTTTGTaGAAGGAGTATCCAAGAACT +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQAVLCL*KEYPRT
Trigger: AGTTCTTGGATACTCCTTGCACAAACAGAGGACTGC...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR GCA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCCTTTACAACTTCAGCTaGACACAAATGTCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPLYNFS*TQMSKR
Trigger: TCTTTTGGACATTTGTGTGCAGCTGAAGTTGTAAAG...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACTCGTGGTTGAGATCATaGCTCTATTCTGAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNSWLRS*LYSEQF
Trigger: AAACTGCTCAGAATAGAGCCATGATCTCAACCACGA...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGGTTTGGTTCCAGAATTaGCTACTGGAGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQVWFQN*LLEWKM
Trigger: CATCTTCCACTCCAGTAGCCAATTCTGGAACCAAAC...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACCAAGGAAATATCGATaGGGAACAGGAAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKPRKYR*GTGNLH
Trigger: ATGAAGATTTCCTGTTCCCCATCGATATTTCCTTGG...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp GGCCTTGGAATGATTTGCAGTCCGATTTTTCCTTCAGCAAATCGCTCTTTTGATCAAATCTTTCTGATCTaGTTTGCCCAAACTTTGTTT +
Preference number: 4 (lower is better)
Translates to: GLGMICSPIFPSANRSFDQIFLI*FAQTLF
Trigger: AAACAAAGTTTGGGCAAACCAGATCAGAAAGATTTG...ATCAAAAGAGCGATTTGCTGAAGGAAAAATCGGACTGCAAATCATTCCAAGGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGAATCACAAGCTTCCTTaGCTTCAATTTGTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQNHKLP*LQFVLG
Trigger: TCCTAACACAAATTGAAGCCAAGGAAGCTTGTGATT...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358919.6
CDS-3UTR CCA 90 bp ACATATTTTGATGGTTTGACCAAGTGGGTAGTCGTTGAATTACACATCTGCATAGATGGTTTGACCAAGTaGGTAGTCGTTGAATTACAC +
Preference number: 4 (lower is better)
Translates to: TYFDGLTKWVVVELHICIDGLTK*VVVELH
Trigger: GTGTAATTCAACGACTACCCACTTGGTCAAACCATC...TATGCAGATGTGTAATTCAACGACTACCCACTTGGTCAAACCATCAAAATATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS-3UTR TCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGCTTGGTTACTTTGTATaGTGGGCAGTGCCTTTTCTA +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQLGYFV*WAVPFL
Trigger: TAGAAAAGGCACTGCCCATCATACAAAGTAACCAAG...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR TCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGTTCTCTTACGAAGTCTaGCTTGGTTATCTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQFSYEV*LGYLWV
Trigger: AACCCACAGATAACCAAGTCAGACTTCGTAAGAGAA...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR TCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGTCGTGTCTGATTTACTaGAATGGTATCTGCTCCACT +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQSCLIY*NGICST
Trigger: AGTGGAGCAGATACCATTTCAGTAAATCAGACACGA...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR TCA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCACGTTGTTAAATGTTaGCTGATTGAAAGGATCGAA +
Preference number: 4 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHHVVKC*LIERIE
Trigger: TTCGATCCTTTCAATCAGTCAACATTTAACAACGTG...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR GCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACAAACACACTTCTCTTTaGGGTCCACATTTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNKHTSL*GPHLEL
Trigger: CAACTCTAAATGTGGACCGCAAAGAGAAGTGTGTTT...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR GCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGTGGCCTGATGTTTTCTaGCCTTGGGTATTTAAAACC +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQWPDVF*PWVFKT
Trigger: GGTTTTAAATACCCAAGGGCAGAAAACATCAGGCCA...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR GCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACGTTCAAAGTATCCACTaGATTTACTTTGGGTGCATC +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNVQSIH*IYFGCI
Trigger: GATGCACCCAAAGTAAATGCAGTGGATACTTTGAAC...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACTTCTGCCTTGACCTTTaGTGGACTTTTGTTTTGATG +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNFCLDL*WTFVLM
Trigger: CATCAAAACAAAAGTCCACCAAAGGTCAAGGCAGAA...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CCA 90 bp ACATATTTTGATGGTTTGACCAAGTGGGTAGTCGTTGAATTACACATCTGCATATTCTGCCTTGACCTTTaGTGGACTTTTGTTTTGATG +
Preference number: 4 (lower is better)
Translates to: TYFDGLTKWVVVELHICIFCLDL*WTFVLM
Trigger: CATCAAAACAAAAGTCCACCAAAGGTCAAGGCAGAA...TATGCAGATGTGTAATTCAACGACTACCCACTTGGTCAAACCATCAAAATATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS-3UTR CCA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTCCAAGGAAATATCGATaGGGAACAGGAAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: DTGTHTLISQENEVSSLSPRKYR*GTGNLH
Trigger: ATGAAGATTTCCTGTTCCCCATCGATATTTCCTTGG...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCAAATCTTTCTGATCTaGTTTGCCCAAACTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQQIFLI*FAQTLF
Trigger: AAACAAAGTTTGGGCAAACCAGATCAGAAAGATTTG...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAACAAATCTTTCTGATCTaGTTTGCCCAAACTTTGTTT +
Preference number: 4 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKQIFLI*FAQTLF
Trigger: AAACAAAGTTTGGGCAAACCAGATCAGAAAGATTTG...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CCA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGAAAATAAACTGCATTTaGAATGGGTGTAAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQKINCI*NGCKSQ
Trigger: TTGGCTCTTACACCCATTCCAAATGCAGTTTATTTT...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAAATCACAAGCTTCCTTaGCTTCAATTTCTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKNHKLP*LQFLVL
Trigger: CAACACAAGAAATTGAAGCCAAGGAAGCTTGTGATT...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520226.5
CDS-3UTR TCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACTTTGTTTTGATGTTGTaGAAAACCACTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNFVLML*KTTLLQ
Trigger: CTGGAGAAGAGTGGTTTTTCACAACATCAAAACAAA...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR TCA 90 bp ACATATTTTGATGGTTTGACCAAGTGGGTAGTCGTTGAATTACACATCTGCATATTTGTTTTGATGTTGTaGAAAACCACTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TYFDGLTKWVVVELHICIFVLML*KTTLLQ
Trigger: CTGGAGAAGAGTGGTTTTTCACAACATCAAAACAAA...TATGCAGATGTGTAATTCAACGACTACCCACTTGGTCAAACCATCAAAATATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS-3UTR TCA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTACTAATACTGTCTCTTaGGTCAATCCTTACCATTAC +
Preference number: 4 (lower is better)
Translates to: DTGTHTLISQENEVSSLSTNTVS*VNPYHY
Trigger: GTAATGGTAAGGATTGACTCAAGAGACAGTATTAGT...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAATTAAGCTTATTTCATTaGAAAGCTCCAGGCTTTTAC +
Preference number: 4 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKLSLFH*KAPGFY
Trigger: GTAAAAGCCTGGAGCTTTGCAATGAAATAAGCTTAA...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR GCA 90 bp ACATATTTTGATGGTTTGACCAAGTGGGTAGTCGTTGAATTACACATCTGCATATTTAATTGTAAACACTaGATGCCATCTTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: TYFDGLTKWVVVELHICIFNCKH*MPSSAL
Trigger: CAAGGCAGAAGATGGCATGCAGTGTTTACAATTAAA...TATGCAGATGTGTAATTCAACGACTACCCACTTGGTCAAACCATCAAAATATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS-3UTR GCA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACTTAAGCTTATTTCATTaGAAAGCTCCAGGCTTTTAC +
Preference number: 4 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNLSLFH*KAPGFY
Trigger: GTAAAAGCCTGGAGCTTTGCAATGAAATAAGCTTAA...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR GCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGTTTAATTGTAAACACTaGATGCCATCTTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQFNCKH*MPSSAL
Trigger: CAAGGCAGAAGATGGCATGCAGTGTTTACAATTAAA...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGTCTGATTTACTGAAATaGTATCTGCTCCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQSDLLK*YLLHFQ
Trigger: CTGAAAGTGGAGCAGATACCATTTCAGTAAATCAGA...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR GCA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGCAATTGTTTCTCAGGTaGAATATCTTTCACGTTCAA +
Preference number: 4 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQQLFLR*NIFHVQ
Trigger: TTGAACGTGAAAGATATTGCACCTGAGAAACAATTG...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS GCA 90 bp CAGCCCGGGCGCCGCGACCATGCCTCGGTACTCCGCCCCGCGCTGTaGTCCCGGCCGCAGGCTGTCGCCTGCCTTCAGGAGGCCGGCATT +
Preference number: 5 (lower is better)
Translates to: QPGRRDHASVLRPAL*SRPQAVACLQEAGI
Trigger: AATGCCGGCCTCCTGAAGGCAGGCGACAGCCTGCGGCCGGGAGCACAGCGCGGGGCGGAGTACCGAGGCATGGTCGCGGCGCCCGGGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512044.6
CDS GCA 90 bp CGGCGGCACCCGAGACGCGCGCCCTCGCGGTCCTCAACGCATCCTTaGTCGCCGCTCCCTGCCCCTCGTCACGGCCCCAGAAAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: RRHPRRAPSRSSTHP*SPLPAPRHGPRKKA
Trigger: CGCTTTCTTTCTGGGGCCGTGACGAGGGGCAGGGAGCGGCGAGCAAGGATGCGTTGAGGACCGCGAGGGCGCGCGTCTCGGGTGCCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358919.6
ENST00000515225.1
CDS CCA 90 bp GGGAGGCTGCCAGTGCTGCTGAGGCTGCGGACGGAAGACACCTCCTaGCGCTCGCTGAGGTCCATCAGCGTGCCTCCGGGGCTGGGGCCG +
Preference number: 5 (lower is better)
Translates to: GRLPVLLRLRTEDTS*RSLRSISVPPGLGP
Trigger: CGGCCCCAGCCCCGGAGGCACGCTGATGGACCTCAGCGAGCGCCAGGAGGTGTCTTCCGTCCGCAGCCTCAGCAGCACTGGCAGCCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CCA 90 bp CTTCTTTCTGCACATCAAGCACGGCAGGCGGCGGCGGAAGCGCTGTaGGGAAGTCGAGGCAGGCGGAGGCGGCTCGGCTTCCGCGTCGGG +
Preference number: 5 (lower is better)
Translates to: LLSAHQARQAAAEAL*GSRGRRRRLGFRVG
Trigger: CCCGACGCGGAAGCCGAGCCGCCTCCGCCTGCCTCGACTTCCCCACAGCGCTTCCGCCGCCGCCTGCCGTGCTTGATGTGCAGAAAGAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358919.6
ENST00000515225.1
CDS CCA 90 bp CTCGTAACAGGGCTGGGCGTGCTGACCGCGCTGCTGGTCTCCGACTaGCTGCTGCTGCTGCTGGTCTGCGTGGAGTTGGAAACGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LVTGLGVLTALLVSD*LLLLLVCVELETLL
Trigger: GAGGAGCGTTTCCAACTCCACGCAGACCAGCAGCAGCAGCAGCCAGTCGGAGACCAGCAGCGCGGTCAGCACGCCCAGCCCTGTTACGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS TCA 90 bp GCTCCTGGGTCACATAGCAGGTCTTCCCTTCAGGGGCAGTCCAGGTaGCCTCGCGTTTTCAAAGGGAAACGCAGCGCCGCAGGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: APGSHSRSSLQGQSR*PRVFKGKRSAAGKH
Trigger: GTGCTTGCCTGCGGCGCTGCGTTTCCCTTTGAAAACGCGAGGTCACCTGGACTGCCCCTGAAGGGAAGACCTGCTATGTGACCCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503161.6
CDS GCA 90 bp CCGGGATCTCGGAGGGCTCTTCCGGTTCATTCAGGGAGTTGCCTGTaGTGTCCAGGTCGCTGGGTGTGGTTCGGTCGTTGTCCACATCCA +
Preference number: 5 (lower is better)
Translates to: PGSRRALPVHSGSCL*CPGRWVWFGRCPHP
Trigger: TGGATGTGGACAACGACCGAACCACACCCAGCGACCTGGACAGCACAGGCAACTCCCTGAATGAACCGGAAGAGCCCTCCGAGATCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CCA 90 bp AGTTCCTTGGGGCTGTCGCTACTGTTTTCCCTCCTGAGGCTGATGTaGCCAGGGCCGTGGAAGCTTCCCGTCCTCCAGTTCACAGAGCCG +
Preference number: 5 (lower is better)
Translates to: SSLGLSLLFSLLRLM*PGPWKLPVLQFTEP
Trigger: CGGCTCTGTGAACTGGAGGACGGGAAGCTTCCACGGCCCTGGCCACATCAGCCTCAGGAGGGAAAACAGTAGCGACAGCCCCAAGGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS TCA 90 bp CAGCTCGGGGAAGATGTCCTCGTTCTCCAGATCCGCCAGGTCCCCTaGACTGGAGTAGAGGATGGAGCCCGGCACGTTGTCGTAGATGCT +
Preference number: 5 (lower is better)
Translates to: QLGEDVLVLQIRQVP*TGVEDGARHVVVDA
Trigger: AGCATCTACGACAACGTGCCGGGCTCCATCCTCTACTCCAGTTCAGGGGACCTGGCGGATCTGGAGAACGAGGACATCTTCCCCGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CCA 90 bp CTGTCGCTACTGTTTTCCCTCCTGAGGCTGATGTGGCCAGGGCCGTaGAAGCTTCCCGTCCTCCAGTTCACAGAGCCGTTATTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: LSLLFSLLRLMWPGP*KLPVLQFTEPLFPE
Trigger: CTCGGGGAATAACGGCTCTGTGAACTGGAGGACGGGAAGCTTCCACGGCCCTGGCCACATCAGCCTCAGGAGGGAAAACAGTAGCGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CCA 90 bp GGATGGAGCCCGGCACGTTGTCGTAGATGCTCAGGCGGCTGCTCATaGAGCTGGAAGAATTGCGTCTCTTCAGTTCCTTGGGGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: GWSPARCRRCSGGCS*SWKNCVSSVPWGCR
Trigger: GCGACAGCCCCAAGGAACTGAAGAGACGCAATTCTTCCAGCTCCATGAGCAGCCGCCTGAGCATCTACGACAACGTGCCGGGCTCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS GCA 90 bp TTCTTTCCGGGATCTCGGAGGGCTCTTCCGGTTCATTCAGGGAGTTaGCTGTGCTGTCCAGGTCGCTGGGTGTGGTTCGGTCGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: FFPGSRRALPVHSGS*LCCPGRWVWFGRCP
Trigger: TGGACAACGACCGAACCACACCCAGCGACCTGGACAGCACAGGCAACTCCCTGAATGAACCGGAAGAGCCCTCCGAGATCCCGGAAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS TCA 90 bp ACCCCAGCTTTGAGGGCGCTTTGTGCTTGCTGTGATGGGAGCTCTTaGGCTTCAGGCTCTCCATCCGTTTCAGCAGACTGCGCGTCTTGG +
Preference number: 5 (lower is better)
Translates to: TPALRALCACCDGSS*ASGSPSVSADCASW
Trigger: CCAAGACGCGCAGTCTGCTGAAACGGATGGAGAGCCTGAAGCTCAAGAGCTCCCATCACAGCAAGCACAAAGCGCCCTCAAAGCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS GCA 90 bp CAGTTCCTTGGGAGAGGGCAGGCTGCCGAAAGAGTCGTCATTGCCTaGCAAGTTGCTGGAGGAGCAAACGCTGATGACGGAGTTAGTCCG +
Preference number: 5 (lower is better)
Translates to: QFLGRGQAAERVVIA*QVAGGANADDGVSP
Trigger: CGGACTAACTCCGTCATCAGCGTTTGCTCCTCCAGCAACTTGGCAGGCAATGACGACTCTTTCGGCAGCCTGCCCTCTCCCAAGGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS GCA 90 bp TTGATGCGGTTGCCATTGAGGGCGGAGATCTCCACGCAGTTGAGCTaGTTCAGCTTCTCCTCATCCATCCCCTCTTGCAAGATGGGCCCG +
Preference number: 5 (lower is better)
Translates to: LMRLPLRAEISTQLS*FSFSSSIPSCKMGP
Trigger: CGGGCCCATCTTGCAAGAGGGGATGGATGAGGAGAAGCTGAAGCAGCTCAACTGCGTGGAGATCTCCGCCCTCAATGGCAACCGCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS GCA 90 bp CCTTGGCTTCAATTTGTGTTAGGATCATGGTGTCCGGCTTCTTTCTaGACATCAAGCACGGCAGGCGGCGGCGGAAGCGCTGTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: PWLQFVLGSWCPASF*TSSTAGGGGSAVGK
Trigger: CTTCCCCACAGCGCTTCCGCCGCCGCCTGCCGTGCTTGATGTGCAGAAAGAAGCCGGACACCATGATCCTAACACAAATTGAAGCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358919.6
ENST00000515225.1
CDS CCA 90 bp AGCCCGGCACGTTGTCGTAGATGCTCAGGCGGCTGCTCATGGAGCTaGAAGAATTGCGTCTCTTCAGTTCCTTGGGGCTGTCGCTACTGT +
Preference number: 5 (lower is better)
Translates to: SPARCRRCSGGCSWS*KNCVSSVPWGCRYC
Trigger: ACAGTAGCGACAGCCCCAAGGAACTGAAGAGACGCAATTCTTCCAGCTCCATGAGCAGCCGCCTGAGCATCTACGACAACGTGCCGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CCA 90 bp GCTCTGAGGCAACGGTTGTCCTGTGCGCTGCACGTTGACCGTCAGTaGGACCCCAAACACACTCCGGTCCTTGTAGTCTGGAACCTTGAT +
Preference number: 5 (lower is better)
Translates to: ALRQRLSCALHVDRQ*DPKHTPVLVVWNLD
Trigger: ATCAAGGTTCCAGACTACAAGGACCGGAGTGTGTTTGGGGTCCCACTGACGGTCAACGTGCAGCGCACAGGACAACCGTTGCCTCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000510318.5
ENST00000512044.6
ENST00000513883.5
ENST00000520226.5
CDS-3UTR CAA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTTCAGGAGGCCGGCATaGCGGCTGGCACTGCGGCCC +
Preference number: 5 (lower is better)
Translates to: AKVLETNTMVVEAVALLQFRRPA*RLALRP
Trigger: GGGCCGCAGTGCCAGCCGCAATGCCGGCCTCCTGAA...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512044.6
CDS CCA 90 bp CCGGTTCATTCAGGGAGTTGCCTGTGCTGTCCAGGTCGCTGGGTGTaGTTCGGTCGTTGTCCACATCCAGGTGTATCTGTTTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: PVHSGSCLCCPGRWV*FGRCPHPGVSVLER
Trigger: CCTCTCCAAAACAGATACACCTGGATGTGGACAACGACCGAACCACACCCAGCGACCTGGACAGCACAGGCAACTCCCTGAATGAACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp GTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGTCAGCTGACATTCCATaGGGGCAGGAAGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: VLPEPSPGFPVWEWVAQLSADIP*GQEGGC
Trigger: GCAGCCTCCTTCCTGCCCCAATGGAATGTCAGCTGA...CAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS TCA 90 bp CCGCTGATGATCAACCCCAGCTTTGAGGGCGCTTTGTGCTTGCTGTaGTGGGAGCTCTTGAGCTTCAGGCTCTCCATCCGTTTCAGCAGA +
Preference number: 5 (lower is better)
Translates to: PLMINPSFEGALCLL*WELLSFRLSIRFSR
Trigger: TCTGCTGAAACGGATGGAGAGCCTGAAGCTCAAGAGCTCCCATCACAGCAAGCACAAAGCGCCCTCAAAGCTGGGGTTGATCATCAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS TCA 90 bp AAACAGGCCATCCACACAGTCCTGGAGGAAGTGTTGGTAGTCAGCTaGGTCATCATTACCCAGGTGCCCGAGTGCTTCCAGAGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: KQAIHTVLEEVLVVS*VIITQVPECFQSEG
Trigger: CCCCTCACTCTGGAAGCACTCGGGCACCTGGGTAATGATGACTCAGCTGACTACCAACACTTCCTCCAGGACTGTGTGGATGGCCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
CDS GCA 90 bp CGTTGTCGTAGATGCTCAGGCGGCTGCTCATGGAGCTGGAAGAATTaGGTCTCTTCAGTTCCTTGGGGCTGTCGCTACTGTTTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: RCRRCSGGCSWSWKN*VSSVPWGCRYCFPS
Trigger: GGAGGGAAAACAGTAGCGACAGCCCCAAGGAACTGAAGAGACGCAATTCTTCCAGCTCCATGAGCAGCCGCCTGAGCATCTACGACAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CCA 90 bp GCTCTTCCGGTTCATTCAGGGAGTTGCCTGTGCTGTCCAGGTCGCTaGGTGTGGTTCGGTCGTTGTCCACATCCAGGTGTATCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: ALPVHSGSCLCCPGR*VWFGRCPHPGVSVL
Trigger: CAAAACAGATACACCTGGATGTGGACAACGACCGAACCACACCCAGCGACCTGGACAGCACAGGCAACTCCCTGAATGAACCGGAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp GTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGTCATTGCCTGCCAAGTaGCTGGAGGAGCAAACGCTG +
Preference number: 5 (lower is better)
Translates to: VLPEPSPGFPVWEWVAQLSLPAK*LEEQTL
Trigger: CAGCGTTTGCTCCTCCAGCAACTTGGCAGGCAATGA...CAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp TGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCGGAGCGCTCAGGGAGTaGGGCGAGAAGTCCGTGAGC +
Preference number: 5 (lower is better)
Translates to: CLSVPDTESTLDIYCHSAGALRE*GEKSVS
Trigger: GCTCACGGACTTCTCGCCCAACTCCCTGAGCGCTCC...GGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358919.6
CDS GCA 90 bp TTGCCACTGATGGCACAAGGCTCATCCTCGTCTGAATCGTCACTCTaGAAAGACAGAAAGGAGCCATTCACACACTGGGGCTGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: LPLMAQGSSSSESSL*KDRKEPFTHWGWQP
Trigger: TGGCTGCCAGCCCCAGTGTGTGAATGGCTCCTTTCTGTCTTTGCAGAGTGACGATTCAGACGAGGATGAGCCTTGTGCCATCAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510250.2
CDS-3UTR CAA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCCGTGCCGCCGCAGGTTaGTTGGTGTGCCTGATGGAG +
Preference number: 5 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCRAAAG*LVCLME
Trigger: CTCCATCAGGCACACCAACAAACCTGCGGCGGCACG...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp GACCCTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTTTGATGCGGTTGCCATaGAGGGCGGAGATCTCCACG +
Preference number: 5 (lower is better)
Translates to: DPDSACKHLSAVARCRHPLMRLP*RAEIST
Trigger: CGTGGAGATCTCCGCCCTCAATGGCAACCGCATCAA...AGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTAATGCCCACCCGCTTGTaGCACGCACTGAGGCTCCGG +
Preference number: 5 (lower is better)
Translates to: IPVDTPVPQHTANKATQVMPTRL*HALRLR
Trigger: CCGGAGCCTCAGTGCGTGCAACAAGCGGGTGGGCAT...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGATGCCCACCCGCTTGTaGCACGCACTGAGGCTCCGG +
Preference number: 5 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVMPTRL*HALRLR
Trigger: CCGGAGCCTCAGTGCGTGCAACAAGCGGGTGGGCAT...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp TTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTGGAGGGCACAGGCTCCTTaGGGTAAATTAGTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: FTRVSCLGVGGSVAVWPWRAQAP*GKLVLQ
Trigger: CTGGAGGACTAATTTACCCAAAGGAGCCTGTGCCCT...CCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp ATCTCCGTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTGCATCAATCTCCTTCTaGGAGGTGTCTCAGTGTGCC +
Preference number: 5 (lower is better)
Translates to: ISVLPEPSPGFPVWEWVAASISF*EVSQCA
Trigger: GGCACACTGAGACACCTCCAAGAAGGAGATTGATGC...AGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS TCA 90 bp TATCTGTTTTGGAGAGGACGGGCAGGGAGAGACCGAGTCCAGGGCTaGGTCCGAATCTCCCTCATCAGAAAACTTCTCCGACCACTGATT +
Preference number: 5 (lower is better)
Translates to: YLFWRGRAGRDRVQG*VRISLIRKLLRPLI
Trigger: AATCAGTGGTCGGAGAAGTTTTCTGATGAGGGAGATTCGGACTCAGCCCTGGACTCGGTCTCTCCCTGCCCGTCCTCTCCAAAACAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS TCA 90 bp AGTCAGCTGAGTCATCATTACCCAGGTGCCCGAGTGCTTCCAGAGTaGGGGGCTTCAGCTCTTGTTCGGTATAGGAATTACGACATCGGC +
Preference number: 5 (lower is better)
Translates to: SQLSHHYPGARVLPE*GASALVRYRNYDIG
Trigger: GCCGATGTCGTAATTCCTATACCGAACAAGAGCTGAAGCCCCTCACTCTGGAAGCACTCGGGCACCTGGGTAATGATGACTCAGCTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CCAACTATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACAGCCGCCGCAGGTTTGTaGGTGTGCCTGATGGAGAGG +
Preference number: 5 (lower is better)
Translates to: PTIPVDTPVPQHTANKATAAAGL*VCLMER
Trigger: CCTCTCCATCAGGCACACCAACAAACCTGCGGCGGC...TGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAATAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp GTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCTTTGGAAAGTCCATTaGCCACTGATGGCACAAGGC +
Preference number: 5 (lower is better)
Translates to: VLPEPSPGFPVWEWVAQLLWKVH*PLMAQG
Trigger: GCCTTGTGCCATCAGTGGCAAATGGACTTTCCAAAG...CAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp GACCCTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTGAGATCTCCACGCAGTaGAGCTGCTTCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: DPDSACKHLSAVARCRHPEISTQ*SCFSFS
Trigger: GGAGAAGCTGAAGCAGCTCAACTGCGTGGAGATCTC...AGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGGGGACGTTGATGCGGTaGCCATTGAGGGCGGAGATC +
Preference number: 5 (lower is better)
Translates to: AKVLETNTMVVEAVALLQGTLMR*PLRAEI
Trigger: GATCTCCGCCCTCAATGGCAACCGCATCAACGTCCC...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ACTGAACCTGATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACCGTACCATGGGGACGTaGATGCGGTTGCCATTGAGG +
Preference number: 5 (lower is better)
Translates to: TEPDASISFLEVSQCARHRTMGT*MRLPLR
Trigger: CCTCAATGGCAACCGCATCAACGTCCCCATGGTACG...GTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATCAGGTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGCTCAGTCGGTGCCTGTaGGACCTGGTTAGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: AKVLETNTMVVEAVALLQLSRCL*DLVREA
Trigger: GGCTTCCCTAACCAGGTCCAACAGGCACCGACTGAG...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAGCCATCACGTGGGCCTaGGGGTCCCCCATCCGCTCG +
Preference number: 5 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKAITWA*GSPIRS
Trigger: CGAGCGGATGGGGGACCCCAAGGCCCACGTGATGGC...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512044.6
CDS TCA 90 bp GTGCCTGATGGAGAGGAGCTGGTGCTGAGGGCATTTTCTATGTCCTaGTCAAGCTGGTCCAGTTTCATAATCAGCAGCACCATGGAGTCC +
Preference number: 5 (lower is better)
Translates to: VPDGEELVLRAFSMS*SSWSSFIISSTMES
Trigger: GGACTCCATGGTGCTGCTGATTATGAAACTGGACCAGCTTGATCAGGACATAGAAAATGCCCTCAGCACCAGCTCCTCTCCATCAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS TCA 90 bp CTGAGTCCGAATCTCCCTCATCAGAAAACTTCTCCGACCACTGATTaGCTATCCGCTGCATCCCCTTCACGTGGTAGAGGATGTCGTCCA +
Preference number: 5 (lower is better)
Translates to: LSPNLPHQKTSPTTD*LSAASPSRGRGCRP
Trigger: TGGACGACATCCTCTACCACGTGAAGGGGATGCAGCGGATAGTCAATCAGTGGTCGGAGAAGTTTTCTGATGAGGGAGATTCGGACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS TCA 90 bp TTCTTTGCATTACCCTGGGAGAGGAATTCTCTCTCTTCAGGGTGTTaGGATGGAAGAGGGAAGGCGCTAAGCACACGGCCAGGTTGGTTG +
Preference number: 5 (lower is better)
Translates to: FFALPWERNSLSSGC*DGRGKALSTRPGWL
Trigger: CAACCAACCTGGCCGTGTGCTTAGCGCCTTCCCTCTTCCATCTCAACACCCTGAAGAGAGAGAATTCCTCTCCCAGGGTAATGCAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATCTCCGTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTGTCAGGTTTCCTTCGTaGCTGAGCAATTACAGCAGA +
Preference number: 5 (lower is better)
Translates to: ISVLPEPSPGFPVWEWVAVRFPS*LSNYSR
Trigger: TCTGCTGTAATTGCTCAGCAACGAAGGAAACCTGAC...AGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp TTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCAGTTTGGCCTTGGATGCCATCTTCTGCCTaGACCTTTGGTGGACTTTTG +
Preference number: 5 (lower is better)
Translates to: FTRVSCLGVGGSVAVWPWMPSSA*TFGGLL
Trigger: CAAAAGTCCACCAAAGGTCAAGGCAGAAGATGGCAT...CCAAGGCCAAACTGCAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTCTCATCCATCCCCTCTaGCAAGATGGGCCCGCTGAT +
Preference number: 5 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVALIHPL*QDGPAD
Trigger: ATCAGCGGGCCCATCTTGCAAGAGGGGATGGATGAG...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGCTCATCCATCCCCTCTaGCAAGATGGGCCCGCTGAT +
Preference number: 5 (lower is better)
Translates to: AKVLETNTMVVEAVALLQLIHPL*QDGPAD
Trigger: ATCAGCGGGCCCATCTTGCAAGAGGGGATGGATGAG...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CCAACTATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACAGGGACGTTGATGCGGTaGCCATTGAGGGCGGAGATC +
Preference number: 5 (lower is better)
Translates to: PTIPVDTPVPQHTANKATGTLMR*PLRAEI
Trigger: GATCTCCGCCCTCAATGGCAACCGCATCAACGTCCC...TGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAATAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGCGTACCATGGGGACGTaGATGCGGTTGCCATTGAGG +
Preference number: 5 (lower is better)
Translates to: AKVLETNTMVVEAVALLQRTMGT*MRLPLR
Trigger: CCTCAATGGCAACCGCATCAACGTCCCCATGGTACG...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ACTGAACCTGATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACCTGGTCTGCGTGGAGTaGGAAACGCTCCTCTTTCGT +
Preference number: 5 (lower is better)
Translates to: TEPDASISFLEVSQCARHLVCVE*ETLLFR
Trigger: ACGAAAGAGGAGCGTTTCCAACTCCACGCAGACCAG...GTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATCAGGTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp ACTGAACCTGATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACGGTGTGGTTCGGTCGTaGTCCACATCCAGGTGTATC +
Preference number: 5 (lower is better)
Translates to: TEPDASISFLEVSQCARHGVVRS*STSRCI
Trigger: GATACACCTGGATGTGGACAACGACCGAACCACACC...GTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATCAGGTTCAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp TGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCGGTTCATTCAGGGAGTaGCCTGTGCTGTCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: CLSVPDTESTLDIYCHSAGSFRE*PVLSRS
Trigger: CGACCTGGACAGCACAGGCAACTCCCTGAATGAACC...GGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp GAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCACACCTGTGCGCTGCACGTaGACCGTCAGTGGGACCCCA +
Preference number: 5 (lower is better)
Translates to: ESTLDIYCHSASNKHTFTPVRCT*TVSGTP
Trigger: TGGGGTCCCACTGACGGTCAACGTGCAGCGCACAGG...TGTGAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTAGCTCTGAGGCAACGGTaGTCCTGTGCGCTGCACGTT +
Preference number: 5 (lower is better)
Translates to: IPVDTPVPQHTANKATQVALRQR*SCALHV
Trigger: AACGTGCAGCGCACAGGACAACCGTTGCCTCAGAGC...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp CTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTCTCATGGTGGTGGAAGCGGTaGCGTTGCTTCAGTGATCAC +
Preference number: 5 (lower is better)
Translates to: LTLLASIFLLLHVVVILSWWWKR*RCFSDH
Trigger: GTGATCACTGAAGCAACGCAACCGCTTCCACCACCA...TGAGAGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCAAATGGACAAGGGTGTaGGGCCCCCTTTCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCKWTRV*GPLSGW
Trigger: CCACCCAGAAAGGGGGCCCAACACCCTTGTCCATTT...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAGTCCTCAACGCATCCTaGCTCGCCGCTCCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGVLNAS*LAAPCP
Trigger: GGGGCAGGGAGCGGCGAGCAAGGATGCGTTGAGGAC...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358919.6
CDS TCA 90 bp ACCCTGTTGACAGGCTTTGGAGCCCACTCTCCTATTTGCTTGGTCTaGAGGACCTTGCAGCTTTGCACTGTCAAACATGACCTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: TLLTGFGAHSPICLV*RTLQLCTVKHDLWS
Trigger: AGACCACAGGTCATGTTTGACAGTGCAAAGCTGCAAGGTCCTTCAGACCAAGCAAATAGGAGAGTGGGCTCCAAAGCCTGTCAACAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506171.1
CDS-3UTR CAA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGAGCCGGGACCACCTCTaGCTGTCCCTTTGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVSRDHL*LSLWKV
Trigger: GACTTTCCAAAGGGACAGCAAGAGGTGGTCCCGGCT...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTAAGCCGGGACCACCTCTaGCTGTCCCTTTGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: IPVDTPVPQHTANKATQVSRDHL*LSLWKV
Trigger: GACTTTCCAAAGGGACAGCAAGAGGTGGTCCCGGCT...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCCCGAAAGAGTCGTCATaGCCTGCCAAGTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCPKESS*PAKLLE
Trigger: CTCCAGCAACTTGGCAGGCAATGACGACTCTTTCGG...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTCCGAAAGAGTCGTCATaGCCTGCCAAGTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAPKESS*PAKLLE
Trigger: CTCCAGCAACTTGGCAGGCAATGACGACTCTTTCGG...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGTTGATGCGGTTGCCATaGAGGGCGGAGATCTCCACG +
Preference number: 5 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVLMRLP*RAEIST
Trigger: CGTGGAGATCTCCGCCCTCAATGGCAACCGCATCAA...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGGGACGTTGATGCGGTaGCCATTGAGGGCGGAGATC +
Preference number: 5 (lower is better)
Translates to: PILQGLAKVLETNTMVVEGTLMR*PLRAEI
Trigger: GATCTCCGCCCTCAATGGCAACCGCATCAACGTCCC...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGCGTACCATGGGGACGTaGATGCGGTTGCCATTGAGG +
Preference number: 5 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVRTMGT*MRLPLR
Trigger: CCTCAATGGCAACCGCATCAACGTCCCCATGGTACG...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGATGCCCACCCGCTTGTaGCACGCACTGAGGCTCCGG +
Preference number: 5 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQMPTRL*HALRLR
Trigger: CCGGAGCCTCAGTGCGTGCAACAAGCGGGTGGGCAT...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACGGTGTGGTTCGGTCGTaGTCCACATCCAGGTGTATC +
Preference number: 5 (lower is better)
Translates to: DTPVPQHTANKATQVRIHGVVRS*STSRCI
Trigger: GATACACCTGGATGTGGACAACGACCGAACCACACC...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTGGTGTGGTTCGGTCGTaGTCCACATCCAGGTGTATC +
Preference number: 5 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAGVVRS*STSRCI
Trigger: GATACACCTGGATGTGGACAACGACCGAACCACACC...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGGGTTCATTCAGGGAGTaGCCTGTGCTGTCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVGSFRE*PVLSRS
Trigger: CGACCTGGACAGCACAGGCAACTCCCTGAATGAACC...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp GAGAAAACACATCCAAGAGTACCAACTATTCCAGTGGATACACCAGTCCCTCAACTCAGTCGGTGCCTGTaGGACCTGGTTAGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: EKTHPRVPTIPVDTPVPQLSRCL*DLVREA
Trigger: GGCTTCCCTAACCAGGTCCAACAGGCACCGACTGAG...TTGAGGGACTGGTGTATCCACTGGAATAGTTGGTACTCTTGGATGTGTTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp GTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCAGTTGCACCTTAGACATCTATaGCCATTCAGCCAGCAACAA +
Preference number: 5 (lower is better)
Translates to: VLPEPSPGFPVWEWVAQLHLRHL*PFSQQQ
Trigger: TTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTG...CAACTGAGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACACCAGGGTTTCCTGTTaGGGAGTGGGTGGCTCAGTT +
Preference number: 5 (lower is better)
Translates to: DTPVPQHTANKATQVRIHTRVSC*GVGGSV
Trigger: AACTGAGCCACCCACTCCCAAACAGGAAACCCTGGT...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS CCA 90 bp ACCTTGAATAGCCGTAGTCTTGGGTTTGGTTCCAGAATTGGCTACTaGAGTGGAAGATGGGAGGTCCGTGGACTCAGTGTCAGAAGACAA +
Preference number: 5 (lower is better)
Translates to: TLNSRSLGFGSRIGY*SGRWEVRGLSVRRQ
Trigger: TTGTCTTCTGACACTGAGTCCACGGACCTCCCATCTTCCACTCCAGTAGCCAATTCTGGAACCAAACCCAAGACTACGGCTATTCAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS-3UTR CAA 90 bp GATGGTTTGACCAAGTGGGTAGTCGTTGAATTACACATCTGCATAACAGGGCAATCAGCTGACATTCCATaGGGGCAGGAAGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: DGLTKWVVVELHICITGQSADIP*GQEGGC
Trigger: GCAGCCTCCTTCCTGCCCCAATGGAATGTCAGCTGA...TTGCCCTGTTATGCAGATGTGTAATTCAACGACTACCCACTTGGTCAAACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS-3UTR CAA 90 bp GACCCTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTGGTTTGGTTCCAGAATaGGCTACTGGAGTGGAAGAT +
Preference number: 5 (lower is better)
Translates to: DPDSACKHLSAVARCRHPGLVPE*ATGVED
Trigger: ATCTTCCACTCCAGTAGCCAATTCTGGAACCAAACC...AGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAAGCCGGGACCACCTCTaGCTGTCCCTTTGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: PILQGLAKVLETNTMVVESRDHL*LSLWKV
Trigger: GACTTTCCAAAGGGACAGCAAGAGGTGGTCCCGGCT...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGTCATTGCCTGCCAAGTaGCTGGAGGAGCAAACGCTG +
Preference number: 5 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVSLPAK*LEEQTL
Trigger: CAGCGTTTGCTCCTCCAGCAACTTGGCAGGCAATGA...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAATTGATGCGGTTGCCATaGAGGGCGGAGATCTCCACG +
Preference number: 5 (lower is better)
Translates to: PILQGLAKVLETNTMVVELMRLP*RAEIST
Trigger: CGTGGAGATCTCCGCCCTCAATGGCAACCGCATCAA...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGCTGGTCTGCGTGGAGTaGGAAACGCTCCTCTTTCGT +
Preference number: 5 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVLVCVE*ETLLFR
Trigger: ACGAAAGAGGAGCGTTTCCAACTCCACGCAGACCAG...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAATGCCCACCCGCTTGTaGCACGCACTGAGGCTCCGG +
Preference number: 5 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKMPTRL*HALRLR
Trigger: CCGGAGCCTCAGTGCGTGCAACAAGCGGGTGGGCAT...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACCGTCTCTTCAGTTCCTaGGGGCTGTCGCTACTGTTT +
Preference number: 5 (lower is better)
Translates to: DTPVPQHTANKATQVRIHRLFSS*GLSLLF
Trigger: AAACAGTAGCGACAGCCCCAAGGAACTGAAGAGACG...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp ACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCCTCAGTCGGTGCCTGTaGGACCTGGTTAGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: TESTLDIYCHSASNKHTFLSRCL*DLVREA
Trigger: GGCTTCCCTAACCAGGTCCAACAGGCACCGACTGAG...GAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp CTGACTCTGCTTGCAAGCATCTTTCTGCTGTTGCACGTTGTCGTCATCCTCTCATGTAGTGATACAGAGTaGAGGCTTGGCCGATGTGAG +
Preference number: 5 (lower is better)
Translates to: LTLLASIFLLLHVVVILSCSDTE*RLGRCE
Trigger: CTCACATCGGCCAAGCCTCAACTCTGTATCACTACA...TGAGAGGATGACGACAACGTGCAACAGCAGAAAGATGCTTGCAAGCAGAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACCTGTGCGCTGCACGTaGACCGTCAGTGGGACCCCA +
Preference number: 5 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKPVRCT*TVSGTP
Trigger: TGGGGTCCCACTGACGGTCAACGTGCAGCGCACAGG...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCCTGTGCGCTGCACGTaGACCGTCAGTGGGACCCCA +
Preference number: 5 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHPVRCT*TVSGTP
Trigger: TGGGGTCCCACTGACGGTCAACGTGCAGCGCACAGG...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp GAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCACAGCTCTGAGGCAACGGTaGTCCTGTGCGCTGCACGTT +
Preference number: 5 (lower is better)
Translates to: ESTLDIYCHSASNKHTFTALRQR*SCALHV
Trigger: AACGTGCAGCGCACAGGACAACCGTTGCCTCAGAGC...TGTGAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp CCAACTATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACAGAGTGGGTGGCTCAGTaGCAGTTTGGCCTTGGAATG +
Preference number: 5 (lower is better)
Translates to: PTIPVDTPVPQHTANKATEWVAQ*QFGLGM
Trigger: CATTCCAAGGCCAAACTGCAACTGAGCCACCCACTC...TGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAATAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTTCTGCTGTTGCACGTaGTCGTCATCCTCTCAGCGT +
Preference number: 5 (lower is better)
Translates to: AKVLETNTMVVEAVALLQFCCCT*SSSSQR
Trigger: ACGCTGAGAGGATGACGACAACGTGCAACAGCAGAA...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS TCA 90 bp ACCATTCTGGCATGTGGCCCCTTAAGTCAACTCTGCACATGTAGGTaGGTTTGGATTTTCCTGGCCCACAGGGTTCAATCAAATACCTGG +
Preference number: 5 (lower is better)
Translates to: TILACGPLSQLCTCR*VWIFLAHRVQSNTW
Trigger: CCAGGTATTTGATTGAACCCTGTGGGCCAGGAAAATCCAAACTCACCTACATGTGCAGAGTTGACTTAAGGGGCCACATGCCAGAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
CDS TCA 90 bp GAGAAGCCGCCAGTTTGGGGATGTGTAGTTATGGTATTTTGTGACTaGTGGGATGTGTTCAATGAGGGAGAGGAAGGAACCATGGAGGAC +
Preference number: 5 (lower is better)
Translates to: EKPPVWGCVVMVFCD*WDVFNEGEEGTMED
Trigger: GTCCTCCATGGTTCCTTCCTCTCCCTCATTGAACACATCCCATCAGTCACAAAATACCATAACTACACATCCCCAAACTGGCGGCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529018.1
CDS CCA 90 bp CGTAGTCTTGGGTTTGGTTCCAGAATTGGCTACTGGAGTGGAAGATaGGAGGTCCGTGGACTCAGTGTCAGAAGACAAATTTACTCGTGT +
Preference number: 5 (lower is better)
Translates to: RSLGFGSRIGYWSGR*EVRGLSVRRQIYSC
Trigger: ACACGAGTAAATTTGTCTTCTGACACTGAGTCCACGGACCTCCCATCTTCCACTCCAGTAGCCAATTCTGGAACCAAACCCAAGACTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS CCA 90 bp GGAAAAGCTTCTTGCACTCGGCGATCATATGGGCCAGCCCTTGAGTaGCAGCTAGGTTTTCATTCAAATCTTTCTGATCTGGTTTGCCCA +
Preference number: 5 (lower is better)
Translates to: GKASCTRRSYGPALE*QLGFHSNLSDLVCP
Trigger: TGGGCAAACCAGATCAGAAAGATTTGAATGAAAACCTAGCTGCCACTCAAGGGCTGGCCCATATGATCGCCGAGTGCAAGAAGCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAACTGGGGGAAACCAGTaGCCCGTAGCCAATCACAAG +
Preference number: 5 (lower is better)
Translates to: PILQGLAKVLETNTMVVETGGNQ*PVANHK
Trigger: CTTGTGATTGGCTACGGGCAACTGGTTTCCCCCAGT...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATCTCCGTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTAAATCATGCTCTCTCTaGACCAAGGAAATATCGATG +
Preference number: 5 (lower is better)
Translates to: ISVLPEPSPGFPVWEWVAKSCSL*TKEISM
Trigger: CATCGATATTTCCTTGGTCAAGAGAGAGCATGATTT...AGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTCTTTGGAAAGTCCATTaGCCACTGATGGCACAAGGC +
Preference number: 5 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVALWKVH*PLMAQG
Trigger: GCCTTGTGCCATCAGTGGCAAATGGACTTTCCAAAG...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTCCTCTTGCTGTCCCTTaGGAAAGTCCATTTGCCACT +
Preference number: 5 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAPLAVP*ESPFAT
Trigger: AGTGGCAAATGGACTTTCCAAAGGGACAGCAAGAGG...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAATCATTGCCTGCCAAGTaGCTGGAGGAGCAAACGCTG +
Preference number: 5 (lower is better)
Translates to: PILQGLAKVLETNTMVVESLPAK*LEEQTL
Trigger: CAGCGTTTGCTCCTCCAGCAACTTGGCAGGCAATGA...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp GACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACACCGAAAGAGTCGTCATaGCCTGCCAAGTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: DTESTLDIYCHSASNKHTPKESS*PAKLLE
Trigger: CTCCAGCAACTTGGCAGGCAATGACGACTCTTTCGG...TGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAATACATGCCCACCCGCTaGTTGCACGCACTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKYMPTR*LHALRL
Trigger: GAGCCTCAGTGCGTGCAACAAGCGGGTGGGCATGTA...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCTACATGCCCACCCGCTaGTTGCACGCACTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPYMPTR*LHALRL
Trigger: GAGCCTCAGTGCGTGCAACAAGCGGGTGGGCATGTA...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATTCGGTTCATTCAGGGAGTaGCCTGTGCTGTCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: TESTLDIYCHSASNKHTFGSFRE*PVLSRS
Trigger: CGACCTGGACAGCACAGGCAACTCCCTGAATGAACC...GAATGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAACTCAGTCGGTGCCTGTaGGACCTGGTTAGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKLSRCL*DLVREA
Trigger: GGCTTCCCTAACCAGGTCCAACAGGCACCGACTGAG...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACTGTAGTGATACAGAGTaGAGGCTTGGCCGATGTGAG +
Preference number: 5 (lower is better)
Translates to: DTPVPQHTANKATQVRIHCSDTE*RLGRCE
Trigger: CTCACATCGGCCAAGCCTCAACTCTGTATCACTACA...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTGTAGTGATACAGAGTaGAGGCTTGGCCGATGTGAG +
Preference number: 5 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVACSDTE*RLGRCE
Trigger: CTCACATCGGCCAAGCCTCAACTCTGTATCACTACA...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATCTCCGTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCTGGTAAATTTCAGTTaGGCTGTCCAGAATTTCGAT +
Preference number: 5 (lower is better)
Translates to: ISVLPEPSPGFPVWEWVALVNFS*AVQNFD
Trigger: ATCGAAATTCTGGACAGCCAAACTGAAATTTACCAG...AGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGAGGGCACAGGCTCCTTaGGGTAAATTAGTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVRAQAP*GKLVLQ
Trigger: CTGGAGGACTAATTTACCCAAAGGAGCCTGTGCCCT...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp GAGAAAACACATCCAAGAGTACCAACTATTCCAGTGGATACACCAGTCCCTCAATGGTGGTGGAAGCGGTaGCGTTGCTTCAGTGATCAC +
Preference number: 5 (lower is better)
Translates to: EKTHPRVPTIPVDTPVPQWWWKR*RCFSDH
Trigger: GTGATCACTGAAGCAACGCAACCGCTTCCACCACCA...TTGAGGGACTGGTGTATCCACTGGAATAGTTGGTACTCTTGGATGTGTTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS TCA 90 bp GGACCTTGCAGCTTTGCACTGTCAAACATGACCTGTGGTCTGTGCTaGCTGTTGGTATCTCAGGTTTCTCTTATCATTGGTGAAACTGGC +
Preference number: 5 (lower is better)
Translates to: GPCSFALSNMTCGLC*LLVSQVSLIIGETG
Trigger: GCCAGTTTCACCAATGATAAGAGAAACCTGAGATACCAACAGTCAGCACAGACCACAGGTCATGTTTGACAGTGCAAAGCTGCAAGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506171.1
CDS TCA 90 bp AGCCAGAGAATCTGTGCATATGTCTTACCTTTCTCTTACGAAGTCTaGCTTGGTTATCTGTGGGTTCCTGGGTGGCCAGGGTCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: SQRICAYVLPFSYEV*LGYLWVPGWPGSPL
Trigger: TAAAGGAGACCCTGGCCACCCAGGAACCCACAGATAACCAAGTCAGACTTCGTAAGAGAAAGGTAAGACATATGCACAGATTCTCTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS TCA 90 bp GAGAGCCTAACACAATGGGAGCCAACTCCAGAGCTCAACAGTGAATaGCCTGAAGTCAAAATAAAATCTGCTGCTGATGACCCGGAGAAC +
Preference number: 5 (lower is better)
Translates to: ESLTQWEPTPELNSE*PEVKIKSAADDPEN
Trigger: GTTCTCCGGGTCATCAGCAGCAGATTTTATTTTGACTTCAGGTCATTCACTGTTGAGCTCTGGAGTTGGCTCCCATTGTGTTAGGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510318.5
ENST00000513883.5
CDS GCA 90 bp AGCTATCATAGTGCATACCTCTCAGCCTTGTACCACATGGCAGCATaGAGCAAAAGCATGGGCGCAAAGAATGAGCTATTCACTCAGGAT +
Preference number: 5 (lower is better)
Translates to: SYHSAYLSALYHMAA*SKSMGAKNELFTQD
Trigger: ATCCTGAGTGAATAGCTCATTCTTTGCGCCCATGCTTTTGCTGCATGCTGCCATGTGGTACAAGGCTGAGAGGTATGCACTATGATAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529018.1
CDS-3UTR CAA 90 bp ATCTCCGTGCTTCCTGAACCTTCACCAGGGTTTCCTGTTTGGGAGTGGGTGGCTCTTAAGCTTATTTCATaGCAAAGCTCCAGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: ISVLPEPSPGFPVWEWVALKLIS*QSSRLL
Trigger: TAAAAGCCTGGAGCTTTGCAATGAAATAAGCTTAAG...AGCCACCCACTCCCAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCACGGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACGCCGCCGCAGGTTTGTaGGTGTGCCTGATGGAGAGG +
Preference number: 5 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNAAAGL*VCLMER
Trigger: CCTCTCCATCAGGCACACCAACAAACCTGCGGCGGC...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACCGTGCCGCCGCAGGTTaGTTGGTGTGCCTGATGGAG +
Preference number: 5 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNRAAAG*LVCLME
Trigger: CTCCATCAGGCACACCAACAAACCTGCGGCGGCACG...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACTTTGGAAAGTCCATTaGCCACTGATGGCACAAGGC +
Preference number: 5 (lower is better)
Translates to: IPVDTPVPQHTANKATQVLWKVH*PLMAQG
Trigger: GCCTTGTGCCATCAGTGGCAAATGGACTTTCCAAAG...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCCTCATCCATCCCCTCTaGCAAGATGGGCCCGCTGAT +
Preference number: 5 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPLIHPL*QDGPAD
Trigger: ATCAGCGGGCCCATCTTGCAAGAGGGGATGGATGAG...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCTTGATGCGGTTGCCATaGAGGGCGGAGATCTCCACG +
Preference number: 5 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPLMRLP*RAEIST
Trigger: CGTGGAGATCTCCGCCCTCAATGGCAACCGCATCAA...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACGGGACGTTGATGCGGTaGCCATTGAGGGCGGAGATC +
Preference number: 5 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHGTLMR*PLRAEI
Trigger: GATCTCCGCCCTCAATGGCAACCGCATCAACGTCCC...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAATACATGCCCACCCGCTaGTTGCACGCACTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKYMPTR*LHALRL
Trigger: GAGCCTCAGTGCGTGCAACAAGCGGGTGGGCATGTA...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACTACATGCCCACCCGCTaGTTGCACGCACTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHYMPTR*LHALRL
Trigger: GAGCCTCAGTGCGTGCAACAAGCGGGTGGGCATGTA...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCATGGAGCTGGAAGAATaGCGTCTCTTCAGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCMELEE*RLFSSL
Trigger: CAAGGAACTGAAGAGACGCAATTCTTCCAGCTCCAT...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAGGTTCATTCAGGGAGTaGCCTGTGCTGTCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGGSFRE*PVLSRS
Trigger: CGACCTGGACAGCACAGGCAACTCCCTGAATGAACC...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGTGTAGTGATACAGAGTaGAGGCTTGGCCGATGTGAG +
Preference number: 5 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVCSDTE*RLGRCE
Trigger: CTCACATCGGCCAAGCCTCAACTCTGTATCACTACA...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CCAACTATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACAATCCTCTTCATGAACTaGGGCACGGCCCAGCTAAAA +
Preference number: 5 (lower is better)
Translates to: PTIPVDTPVPQHTANKATILFMN*GTAQLK
Trigger: TTTTAGCTGGGCCGTGCCCAAGTTCATGAAGAGGAT...TGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAATAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGATCCTCTTCATGAACTaGGGCACGGCCCAGCTAAAA +
Preference number: 5 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVILFMN*GTAQLK
Trigger: TTTTAGCTGGGCCGTGCCCAAGTTCATGAAGAGGAT...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACGCTCTGAGGCAACGGTaGTCCTGTGCGCTGCACGTT +
Preference number: 5 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHALRQR*SCALHV
Trigger: AACGTGCAGCGCACAGGACAACCGTTGCCTCAGAGC...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTAACCTGGAAAAGCTTCTaGCACTCGGCGATCATATGG +
Preference number: 5 (lower is better)
Translates to: IPVDTPVPQHTANKATQVTWKSF*HSAIIW
Trigger: CCATATGATCGCCGAGTGCAAGAAGCTTTTCCAGGT...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGACCTGGAAAAGCTTCTaGCACTCGGCGATCATATGG +
Preference number: 5 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVTWKSF*HSAIIW
Trigger: CCATATGATCGCCGAGTGCAAGAAGCTTTTCCAGGT...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACTTCCTAACTGGACCTTaGTTGGAGAGAATCTCCGTG +
Preference number: 5 (lower is better)
Translates to: DTPVPQHTANKATQVRIHFLTGP*LERISV
Trigger: CACGGAGATTCTCTCCAACAAAGGTCCAGTTAGGAA...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTCAATCACAAGCTTCCTaGGCTTCAATTTCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAQSQAS*ASISAS
Trigger: GCTGGCAGAAATTGAAGCCAAGGAAGCTTGTGATTG...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512044.6
CDS TCA 90 bp CCGTCCCCGTTAGTTTCTCCAAAATCTAAGTTCCCATTTCGTGGTTaGGATCATGGCTCTATTCTGAGCAGTTTCACGCAGTGTGTGAGT +
Preference number: 5 (lower is better)
Translates to: PSPLVSPKSKFPFRG*DHGSILSSFTQCVS
Trigger: ACTCACACACTGCGTGAAACTGCTCAGAATAGAGCCATGATCTCAACCACGAAATGGGAACTTAGATTTTGGAGAAACTAACGGGGACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS CCA 90 bp CTTACCTTTCTCTTACGAAGTCTGACTTGGTTATCTGTGGGTTCCTaGGTGGCCAGGGTCTCCTTTAATTGTAAACACTGCATGCCATCT +
Preference number: 5 (lower is better)
Translates to: LTFLLRSLTWLSVGS*VARVSFNCKHCMPS
Trigger: AGATGGCATGCAGTGTTTACAATTAAAGGAGACCCTGGCCACCCAGGAACCCACAGATAACCAAGTCAGACTTCGTAAGAGAAAGGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS-3UTR CAA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGCTTACGAAGTCTGACTaGGTTATCTGTGGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVLTKSD*VICGFL
Trigger: CAGGAACCCACAGATAACCAAGTCAGACTTCGTAAG...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCACTGGGGGAAACCAGTaGCCCGTAGCCAATCACAAG +
Preference number: 5 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPTGGNQ*PVANHK
Trigger: CTTGTGATTGGCTACGGGCAACTGGTTTCCCCCAGT...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAACTGGGGGAAACCAGTaGCCCGTAGCCAATCACAAG +
Preference number: 5 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKTGGNQ*PVANHK
Trigger: CTTGTGATTGGCTACGGGCAACTGGTTTCCCCCAGT...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACAGCCGGGACCACCTCTaGCTGTCCCTTTGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHSRDHL*LSLWKV
Trigger: GACTTTCCAAAGGGACAGCAAGAGGTGGTCCCGGCT...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCCCGAAAGAGTCGTCATaGCCTGCCAAGTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPPKESS*PAKLLE
Trigger: CTCCAGCAACTTGGCAGGCAATGACGACTCTTTCGG...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAGAGATCTCCACGCAGTaGAGCTGCTTCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGEISTQ*SCFSFS
Trigger: GGAGAAGCTGAAGCAGCTCAACTGCGTGGAGATCTC...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGGAGATCTCCACGCAGTaGAGCTGCTTCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQEISTQ*SCFSFS
Trigger: GGAGAAGCTGAAGCAGCTCAACTGCGTGGAGATCTC...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCGTACCATGGGGACGTaGATGCGGTTGCCATTGAGG +
Preference number: 5 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHRTMGT*MRLPLR
Trigger: CCTCAATGGCAACCGCATCAACGTCCCCATGGTACG...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGACTGGTCTGCGTGGAGTaGGAAACGCTCCTCTTTCGT +
Preference number: 5 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGLVCVE*ETLLFR
Trigger: ACGAAAGAGGAGCGTTTCCAACTCCACGCAGACCAG...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTAATGGAGCTGGAAGAATaGCGTCTCTTCAGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: IPVDTPVPQHTANKATQVMELEE*RLFSSL
Trigger: CAAGGAACTGAAGAGACGCAATTCTTCCAGCTCCAT...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGATGGAGCTGGAAGAATaGCGTCTCTTCAGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVMELEE*RLFSSL
Trigger: CAAGGAACTGAAGAGACGCAATTCTTCCAGCTCCAT...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAGGTGTGGTTCGGTCGTaGTCCACATCCAGGTGTATC +
Preference number: 5 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGGVVRS*STSRCI
Trigger: GATACACCTGGATGTGGACAACGACCGAACCACACC...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTAAGGTTTCCGAGAGTTaGTTCGTCATTAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAKVSES*FVISGS
Trigger: TGAGCCACTAATGACGAACAAACTCTCGGAAACCTT...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAATGGTGGTGGAAGCGGTaGCGTTGCTTCAGTGATCAC +
Preference number: 5 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKWWWKR*RCFSDH
Trigger: GTGATCACTGAAGCAACGCAACCGCTTCCACCACCA...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGTGGTGGTGGAAGCGGTaGCGTTGCTTCAGTGATCAC +
Preference number: 5 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQWWWKR*RCFSDH
Trigger: GTGATCACTGAAGCAACGCAACCGCTTCCACCACCA...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCCACCTTAGACATCTATaGCCATTCAGCCAGCAACAA +
Preference number: 5 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCHLRHL*PFSQQQ
Trigger: TTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTG...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS TCA 90 bp CTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTaGTCACCTAGATTTGGTGTCTTTGGTTTCAGTGTTCTGGTTACT +
Preference number: 5 (lower is better)
Translates to: LETNTMVVEAVALLQ*SPRFGVFGFSVLVT
Trigger: AGTAACCAGAACACTGAAACCAAAGACACCAAATCTAGGTGATCACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
CDS TCA 90 bp TATTTGCTTGGTCTGAAGGACCTTGCAGCTTTGCACTGTCAAACATaGCCTGTGGTCTGTGCTGACTGTTGGTATCTCAGGTTTCTCTTA +
Preference number: 5 (lower is better)
Translates to: YLLGLKDLAALHCQT*PVVCADCWYLRFLL
Trigger: TAAGAGAAACCTGAGATACCAACAGTCAGCACAGACCACAGGTCATGTTTGACAGTGCAAAGCTGCAAGGTCCTTCAGACCAAGCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506171.1
CDS TCA 90 bp ACATTAAACACTTACAACTGCTTCCATCTAGCATGGCAGCGTTCCTaGATCACATCTCTAAAGCCGCTCATGGTATCTGCATCCTTCGTC +
Preference number: 5 (lower is better)
Translates to: TLNTYNCFHLAWQRS*ITSLKPLMVSASFV
Trigger: GACGAAGGATGCAGATACCATGAGCGGCTTTAGAGATGTGATTCAGGAACGCTGCCATGCTAGATGGAAGCAGTTGTAAGTGTTTAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517333.1
CDS CCA 90 bp CATGCTGTGTTACGATCATCAGAATTAAAAGGCTGTCCCATCCAGTaGGTCACATGTTCTTCCCAGCTTCTCTTTCTGATAGCTACAGAC +
Preference number: 5 (lower is better)
Translates to: HAVLRSSELKGCPIQ*VTCSSQLLFLIATD
Trigger: GTCTGTAGCTATCAGAAAGAGAAGCTGGGAAGAACATGTGACCCACTGGATGGGACAGCCTTTTAATTCTGATGATCGTAACACAGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
ENST00000517333.1
ENST00000631382.1
CDS CCA 90 bp ATTTCCTTTCTCTTACGAAGTCTGACTTGGTTATCTGTGGGTTCCTaGGTGGCCAGGGTCTCCTTTAATTGTAAACACTGCATGCCATCT +
Preference number: 5 (lower is better)
Translates to: ISFLLRSLTWLSVGS*VARVSFNCKHCMPS
Trigger: AGATGGCATGCAGTGTTTACAATTAAAGGAGACCCTGGCCACCCAGGAACCCACAGATAACCAAGTCAGACTTCGTAAGAGAAAGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS CCA 90 bp CTGCCTCTGCTAGCCAGAACAAAAGCTCACATTGTGAGATTTCAGTaGCATAATATACGGGCTTCAAGTAAGAGTTCTGGTCAGTGCGAT +
Preference number: 5 (lower is better)
Translates to: LPLLARTKAHIVRFQ*HNIRASSKSSGQCD
Trigger: ATCGCACTGACCAGAACTCTTACTTGAAGCCCGTATATTATGCCACTGAAATCTCACAATGTGAGCTTTTGTTCTGGCTAGCAGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529018.1
CDS-3UTR CAA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACATCTTTTTCCATACTaGCCTGCAAGCTGTCAGCTA +
Preference number: 5 (lower is better)
Translates to: IPVDTPVPQHTANKATQVHLFPY*PASCQL
Trigger: TAGCTGACAGCTTGCAGGCAAGTATGGAAAAAGATG...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACGAAACACACTTCTCTTaGCGGTCCACATTTAGAGTT +
Preference number: 5 (lower is better)
Translates to: DTPVPQHTANKATQVRIHETHFS*RSTFRV
Trigger: AACTCTAAATGTGGACCGCAAAGAGAAGTGTGTTTC...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACAGAAACTTGGTTACTTaGTATGATGGGCAGTGCCTT +
Preference number: 5 (lower is better)
Translates to: DTPVPQHTANKATQVRIHRNLVT*YDGQCL
Trigger: AAGGCACTGCCCATCATACAAAGTAACCAAGTTTCT...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp GAGAAAACACATCCAAGAGTACCAACTATTCCAGTGGATACACCAGTCCCTCAAATGGCAGTCCTCTGTTaGTGCAAGGAGTATCCAAGA +
Preference number: 5 (lower is better)
Translates to: EKTHPRVPTIPVDTPVPQMAVLC*CKEYPR
Trigger: TCTTGGATACTCCTTGCACAAACAGAGGACTGCCAT...TTGAGGGACTGGTGTATCCACTGGAATAGTTGGTACTCTTGGATGTGTTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACTCAGCTGACATTCCATaGGGGCAGGAAGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNSADIP*GQEGGC
Trigger: GCAGCCTCCTTCCTGCCCCAATGGAATGTCAGCTGA...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTCAATCACAAGCTTCCTaGGCTTCAATTTCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAQSQAS*ASISAF
Trigger: AAAGGCTGAAATTGAAGCCAAGGAAGCTTGTGATTG...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACACTGGGGGAAACCAGTaGCCCGTAGCCAATCACAAG +
Preference number: 5 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHTGGNQ*PVANHK
Trigger: CTTGTGATTGGCTACGGGCAACTGGTTTCCCCCAGT...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACTCATTGCCTGCCAAGTaGCTGGAGGAGCAAACGCTG +
Preference number: 5 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHSLPAK*LEEQTL
Trigger: CAGCGTTTGCTCCTCCAGCAACTTGGCAGGCAATGA...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACGAGATCTCCACGCAGTaGAGCTGCTTCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHEISTQ*SCFSFS
Trigger: GGAGAAGCTGAAGCAGCTCAACTGCGTGGAGATCTC...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCTGGTCTGCGTGGAGTaGGAAACGCTCCTCTTTCGT +
Preference number: 5 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHLVCVE*ETLLFR
Trigger: ACGAAAGAGGAGCGTTTCCAACTCCACGCAGACCAG...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAACGTCTCTTCAGTTCCTaGGGGCTGTCGCTACTGTTT +
Preference number: 5 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKRLFSS*GLSLLF
Trigger: AAACAGTAGCGACAGCCCCAAGGAACTGAAGAGACG...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCGTCTCTTCAGTTCCTaGGGGCTGTCGCTACTGTTT +
Preference number: 5 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQRLFSS*GLSLLF
Trigger: AAACAGTAGCGACAGCCCCAAGGAACTGAAGAGACG...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGACGTCTCTTCAGTTCCTaGGGGCTGTCGCTACTGTTT +
Preference number: 5 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGRLFSS*GLSLLF
Trigger: AAACAGTAGCGACAGCCCCAAGGAACTGAAGAGACG...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CCAACTATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACAAAGGTTTCCGAGAGTTaGTTCGTCATTAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: PTIPVDTPVPQHTANKATKVSES*FVISGS
Trigger: TGAGCCACTAATGACGAACAAACTCTCGGAAACCTT...TGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAATAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGGGCACAGGCTCCTTaGGGTAAATTAGTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGRAQAP*GKLVLQ
Trigger: CTGGAGGACTAATTTACCCAAAGGAGCCTGTGCCCT...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ACTGAACCTGATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACCTAGATTTGGTGTCTTaGGTTTCAGTGTTCTGGTTA +
Preference number: 5 (lower is better)
Translates to: TEPDASISFLEVSQCARHLDLVS*VSVFWL
Trigger: TAACCAGAACACTGAAACCAAAGACACCAAATCTAG...GTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATCAGGTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGAGTGATCACCTAGATTaGGTGTCTTTGGTTTCAGTG +
Preference number: 5 (lower is better)
Translates to: AKVLETNTMVVEAVALLQSDHLD*VSLVSV
Trigger: CACTGAAACCAAAGACACCAAATCTAGGTGATCACT...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTCAATCACAAGCTTCCTaGGCTTCAATTTGTGTTAGG +
Preference number: 5 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVAQSQAS*ASICVR
Trigger: CCTAACACAAATTGAAGCCAAGGAAGCTTGTGATTG...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358919.6
CDS CCA 90 bp GCTAATTCAGTTTCACCAGCTATTCCCCAGGAGTTAGAAGAAACTTaGTTACTTTGTATGATGGGCAGTGCCTTTTCTAAGGAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: ANSVSPAIPQELEET*LLCMMGSAFSKEPA
Trigger: AGCAGGCTCCTTAGAAAAGGCACTGCCCATCATACAAAGTAACCAAGTTTCTTCTAACTCCTGGGGAATAGCTGGTGAAACTGAATTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS CCA 90 bp TCTGGGGAAAGGTGTAAGGAGACAAACCAATTGCCACTTCCGAGTTaGAAAAATTGGATCCCTTTGTGCTCTTATCTTCATCCACTTCCA +
Preference number: 5 (lower is better)
Translates to: SGERCKETNQLPLPS*KNWIPLCSYLHPLP
Trigger: TGGAAGTGGATGAAGATAAGAGCACAAAGGGATCCAATTTTTCCAACTCGGAAGTGGCAATTGGTTTGTCTCCTTACACCTTTCCCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316609.9
ENST00000506171.1
CDS-3UTR CAA 90 bp ACTGAACCTGATGCATCAATCTCCTTCTTGGAGGTGTCTCAGTGTGCCAGACACTCCACTGCATTTACTTaGGGTGCATCTTTTATTTCA +
Preference number: 5 (lower is better)
Translates to: TEPDASISFLEVSQCARHSTAFT*GASFIS
Trigger: TGAAATAAAAGATGCACCCAAAGTAAATGCAGTGGA...GTGTCTGGCACACTGAGACACCTCCAAGAAGGAGATTGATGCATCAGGTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAGCCGTAGTCTTGGGTTaGGTTCCAGAATTGGCTACT +
Preference number: 5 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKAVVLG*VPELAT
Trigger: AGTAGCCAATTCTGGAACCAAACCCAAGACTACGGC...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp TGTCTCAGTGTGCCAGACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAAATCATGCTCTCTCTaGACCAAGGAAATATCGATG +
Preference number: 5 (lower is better)
Translates to: CLSVPDTESTLDIYCHSAKSCSL*TKEISM
Trigger: CATCGATATTTCCTTGGTCAAGAGAGAGCATGATTT...GGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTCTGGCACACTGAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCAAATCATGCTCTCTCTaGACCAAGGAAATATCGATG +
Preference number: 5 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCKSCSL*TKEISM
Trigger: CATCGATATTTCCTTGGTCAAGAGAGAGCATGATTT...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAACTTTGGAAAGTCCATTaGCCACTGATGGCACAAGGC +
Preference number: 5 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKLWKVH*PLMAQG
Trigger: GCCTTGTGCCATCAGTGGCAAATGGACTTTCCAAAG...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAACCTCTTGCTGTCCCTTaGGAAAGTCCATTTGCCACT +
Preference number: 5 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKPLAVP*ESPFAT
Trigger: AGTGGCAAATGGACTTTCCAAAGGGACAGCAAGAGG...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCCCTCTTGCTGTCCCTTaGGAAAGTCCATTTGCCACT +
Preference number: 5 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPPLAVP*ESPFAT
Trigger: AGTGGCAAATGGACTTTCCAAAGGGACAGCAAGAGG...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGACCTCTTGCTGTCCCTTaGGAAAGTCCATTTGCCACT +
Preference number: 5 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGPLAVP*ESPFAT
Trigger: AGTGGCAAATGGACTTTCCAAAGGGACAGCAAGAGG...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGCAGCTAAAACCATGCTaGTTAGAAGGTGTGTATTTC +
Preference number: 5 (lower is better)
Translates to: AKVLETNTMVVEAVALLQQLKPC*LEGVYF
Trigger: GAAATACACACCTTCTAACAAGCATGGTTTTAGCTG...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAACCTGGAAAAGCTTCTaGCACTCGGCGATCATATGG +
Preference number: 5 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGTWKSF*HSAIIW
Trigger: CCATATGATCGCCGAGTGCAAGAAGCTTTTCCAGGT...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCCTGGTAAATTTCAGTTaGGCTGTCCAGAATTTCGAT +
Preference number: 5 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCLVNFS*AVQNFD
Trigger: ATCGAAATTCTGGACAGCCAAACTGAAATTTACCAG...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACAGGGCACAGGCTCCTTaGGGTAAATTAGTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHRAQAP*GKLVLQ
Trigger: CTGGAGGACTAATTTACCCAAAGGAGCCTGTGCCCT...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACCTAGATTTGGTGTCTTaGGTTTCAGTGTTCTGGTTA +
Preference number: 5 (lower is better)
Translates to: DTPVPQHTANKATQVRIHLDLVS*VSVFWL
Trigger: TAACCAGAACACTGAAACCAAAGACACCAAATCTAG...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp ATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTAAGTGATCACCTAGATTaGGTGTCTTTGGTTTCAGTG +
Preference number: 5 (lower is better)
Translates to: IPVDTPVPQHTANKATQVSDHLD*VSLVSV
Trigger: CACTGAAACCAAAGACACCAAATCTAGGTGATCACT...TACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTGTGCAAACCTTTCTTaGCTCATCTTGGTGAGAAAA +
Preference number: 5 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVACANLS*LILVRK
Trigger: TTTTCTCACCAAGATGAGCAAAGAAAGGTTTGCACA...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGAACCAGAAAACCTATTaGCTGATAAGAACAAGCCCA +
Preference number: 5 (lower is better)
Translates to: AKVLETNTMVVEAVALLQNQKTY*LIRTSP
Trigger: TGGGCTTGTTCTTATCAGCAAATAGGTTTTCTGGTT...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp GACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACATGGCCTTGGAATGATTaGCAGTCCGATTTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: DTESTLDIYCHSASNKHTWPWND*QSDFSF
Trigger: GAAGGAAAAATCGGACTGCAAATCATTCCAAGGCCA...TGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp ACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTCTTCAATTTCTTGTGTaGTTTCACTGTTGCGTGATC +
Preference number: 5 (lower is better)
Translates to: TGKSSRNKHHGGGSGCVALQFLV*FHCCVI
Trigger: GATCACGCAACAGTGAAACAACACAAGAAATTGAAG...AGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520226.5
CDS TCA 90 bp GAAACATGCACTAGTGTTTCTGTGCTGGCTTCCAGAGAAAGAAACTaGTCTTCACCTTCATGGCTGTCATTTTCGTCCACATCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: ETCTSVSVLASRERN*SSPSWLSFSSTSFE
Trigger: TTCAAAGGATGTGGACGAAAATGACAGCCATGAAGGTGAAGATCAGTTTCTTTCTCTGGAAGCCAGCACAGAAACACTAGTGCATGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
ENST00000631382.1
CDS GCA 90 bp AGAATTTCGATCACTTTTGAATCCAACAGGTCTACATCCCAGAGGTaGTGTTCTTTAAGTAGGCGCTTTAAGATTTCCTCTGGCACAGCA +
Preference number: 5 (lower is better)
Translates to: RISITFESNRSTSQR*CSLSRRFKISSGTA
Trigger: TGCTGTGCCAGAGGAAATCTTAAAGCGCCTACTTAAAGAACAGCACCTCTGGGATGTAGACCTGTTGGATTCAAAAGTGATCGAAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
ENST00000521730.1
CDS CCA 90 bp TTACTTTGTATGATGGGCAGTGCCTTTTCTAAGGAGCCTGCTCCTTaGATCATATGTTGGCCTGATGTTTTCTGCCCTTGGGTATTTAAA +
Preference number: 5 (lower is better)
Translates to: LLCMMGSAFSKEPAP*IICWPDVFCPWVFK
Trigger: TTTAAATACCCAAGGGCAGAAAACATCAGGCCAACATATGATCCAAGGAGCAGGCTCCTTAGAAAAGGCACTGCCCATCATACAAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS-3UTR CAA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCATGGAGCTGGAAGAATaGCGTCTCTTCAGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPMELEE*RLFSSL
Trigger: CAAGGAACTGAAGAGACGCAATTCTTCCAGCTCCAT...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGCAGCTAAAACCATGCTaGTTAGAAGGTGTGTATTTC +
Preference number: 5 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVQLKPC*LEGVYF
Trigger: GAAATACACACCTTCTAACAAGCATGGTTTTAGCTG...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAATCCTCTTCATGAACTaGGGCACGGCCCAGCTAAAA +
Preference number: 5 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKILFMN*GTAQLK
Trigger: TTTTAGCTGGGCCGTGCCCAAGTTCATGAAGAGGAT...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAACCTGGAAAAGCTTCTaGCACTCGGCGATCATATGG +
Preference number: 5 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKTWKSF*HSAIIW
Trigger: CCATATGATCGCCGAGTGCAAGAAGCTTTTCCAGGT...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGAATTTCGATCACTTTaGAATCCAACAGGTCTACAT +
Preference number: 5 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCEFRSL*NPTGLH
Trigger: ATGTAGACCTGTTGGATTCAAAAGTGATCGAAATTC...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp TCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCAATGTCCAAAAGATTTaGTGTACCATTCTGGCATGT +
Preference number: 5 (lower is better)
Translates to: SRTGKSSRNKHHGGGSGCNVQKI*CTILAC
Trigger: ACATGCCAGAATGGTACACAAAATCTTTTGGACATT...GCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGCTAGATTTGGTGTCTTaGGTTTCAGTGTTCTGGTTA +
Preference number: 5 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVLDLVS*VSVFWL
Trigger: TAACCAGAACACTGAAACCAAAGACACCAAATCTAG...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTGCATCAATCTCCTTCTaGGAGGTGTCTCAGTGTGCC +
Preference number: 5 (lower is better)
Translates to: DTGTHTLISQENEVSSLSASISF*EVSQCA
Trigger: GGCACACTGAGACACCTCCAAGAAGGAGATTGATGC...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp GATACACCAGTCCCTCAACACACTGCAAATAAAGCGACACAGGTACGCATACACCTAAAATGCTATGCTTaGCAATCTGTGGTTTTAAGG +
Preference number: 5 (lower is better)
Translates to: DTPVPQHTANKATQVRIHLKCYA*QSVVLR
Trigger: CCTTAAAACCACAGATTGCAAAGCATAGCATTTTAG...GTGTATGCGTACCTGTGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp GCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGCAGCAAATCGCTCTTTaGATTGTAGTTGATGCTAAA +
Preference number: 5 (lower is better)
Translates to: AKVLETNTMVVEAVALLQQQIAL*IVVDAK
Trigger: TTTAGCATCAACTACAATCAAAAGAGCGATTTGCTG...CTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAACTTGGCTTCAATTTCTaGTGTTGTTTCACTGTTGCG +
Preference number: 5 (lower is better)
Translates to: PILQGLAKVLETNTMVVELGFNF*CCFTVA
Trigger: CGCAACAGTGAAACAACACAAGAAATTGAAGCCAAG...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520226.5
CDS TCA 90 bp AAATCAGAATCAGAACATACCTTAAGTCAACTCTGCACATGTAGGTaGGTTTGGATTTTCCTGGCCCACAGGGTTCAATCAAATACCTGG +
Preference number: 5 (lower is better)
Translates to: KSESEHTLSQLCTCR*VWIFLAHRVQSNTW
Trigger: CCAGGTATTTGATTGAACCCTGTGGGCCAGGAAAATCCAAACTCACCTACATGTGCAGAGTTGACTTAAGGTATGTTCTGATTCTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521730.1
CDS CCA 90 bp AGGTGTAAGGAGACAAACCAATTGCCACTTCCGAGTTGGAAAAATTaGATCCCTTTGTGCTCTTATCTTCATCCACTTCCAACTTTACTG +
Preference number: 5 (lower is better)
Translates to: RCKETNQLPLPSWKN*IPLCSYLHPLPTLL
Trigger: CAGTAAAGTTGGAAGTGGATGAAGATAAGAGCACAAAGGGATCCAATTTTTCCAACTCGGAAGTGGCAATTGGTTTGTCTCCTTACACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316609.9
ENST00000506171.1
CDS CCA 90 bp GGTTGTTTCAGTAGCTATGAGAGAAAAACTGGTTTCATGTTCCAATaGGCAGTTTCAGCAGCTGGGCTTGTGGAAGATTTAATTCTTGGA +
Preference number: 5 (lower is better)
Translates to: GCFSSYERKTGFMFQ*AVSAAGLVEDLILG
Trigger: TCCAAGAATTAAATCTTCCACAAGCCCAGCTGCTGAAACTGCCCATTGGAACATGAAACCAGTTTTTCTCTCATAGCTACTGAAACAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529018.1
CDS-3UTR CAA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACTTGAAAGATGACCCATaGGCCTCCCAGGAAAATCTC +
Preference number: 5 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHLKDDP*ASQENL
Trigger: GAGATTTTCCTGGGAGGCCAATGGGTCATCTTTCAA...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACTTTCGTCCACATCCTTaGAAAGATGACCCATTGGCC +
Preference number: 5 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHFRPHP*KDDPLA
Trigger: GGCCAATGGGTCATCTTTCAAAGGATGTGGACGAAA...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGAAGGTTTCCGAGAGTTaGTTCGTCATTAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQKVSES*FVISGS
Trigger: TGAGCCACTAATGACGAACAAACTCTCGGAAACCTT...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGGAATTTCGATCACTTTaGAATCCAACAGGTCTACAT +
Preference number: 5 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVEFRSL*NPTGLH
Trigger: ATGTAGACCTGTTGGATTCAAAAGTGATCGAAATTC...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCATGGTGGTGGAACTGGTAAATTTCAGTTaGGCTGTCCAGAATTTCGAT +
Preference number: 5 (lower is better)
Translates to: PILQGLAKVLETNTMVVELVNFS*AVQNFD
Trigger: ATCGAAATTCTGGACAGCCAAACTGAAATTTACCAG...TTCCACCACCATGGTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp AAAAGTTCTAGAAACAAACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGAATGTCCAAAAGATTTaGTGTACCATTCTGGCATGT +
Preference number: 5 (lower is better)
Translates to: KSSRNKHHGGGSGCVASVNVQKI*CTILAC
Trigger: ACATGCCAGAATGGTACACAAAATCTTTTGGACATT...CACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTTTGTTTCTAGAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CCAACTATTCCAGTGGATACACCAGTCCCTCAACACACTGCAAATAAAGCGACAAATGTCCAAAAGATTTaGTGTACCATTCTGGCATGT +
Preference number: 5 (lower is better)
Translates to: PTIPVDTPVPQHTANKATNVQKI*CTILAC
Trigger: ACATGCCAGAATGGTACACAAAATCTTTTGGACATT...TGTCGCTTTATTTGCAGTGTGTTGAGGGACTGGTGTATCCACTGGAATAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTAGCATCTTTCTGCTGTaGCACGTTGTCGTCATCCTC +
Preference number: 5 (lower is better)
Translates to: DTGTHTLISQENEVSSLSSIFLL*HVVVIL
Trigger: GAGGATGACGACAACGTGCAACAGCAGAAAGATGCT...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp GATGGTTTGACCAAGTGGGTAGTCGTTGAATTACACATCTGCATAACAGGGCAAACATATTTTGATGGTTaGACCAAGTGGGTAGTCGTT +
Preference number: 5 (lower is better)
Translates to: DGLTKWVVVELHICITGQTYFDG*TKWVVV
Trigger: AACGACTACCCACTTGGTCAAACCATCAAAATATGT...TTGCCCTGTTATGCAGATGTGTAATTCAACGACTACCCACTTGGTCAAACCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS-3UTR CAA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCTGTGTTGTTTCACTGTaGCGTGATCAGGTACTCATC +
Preference number: 5 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPCVVSL*RDQVLI
Trigger: GATGAGTACCTGATCACGCAACAGTGAAACAACACA...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520226.5
CDS GCA 90 bp TCTAAGGAGCCTGCTCCTTGGATCATATGTTGGCCTGATGTTTTCTaGCCTTGGGTATTTAAAACCTGTTTATCATCTGTAAGGCATAAA +
Preference number: 5 (lower is better)
Translates to: SKEPAPWIICWPDVF*PWVFKTCLSSVRHK
Trigger: TTTATGCCTTACAGATGATAAACAGGTTTTAAATACCCAAGGGCAGAAAACATCAGGCCAACATATGATCCAAGGAGCAGGCTCCTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS-3UTR CAA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAGTTCCCATTTCGTGGTaGAGATCATGGCTCTATTCT +
Preference number: 5 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKVPISW*RSWLYS
Trigger: AGAATAGAGCCATGATCTCAACCACGAAATGGGAAC...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACTTTCGTCCACATCCTTaGAAAGATGACCCATTGGCC +
Preference number: 5 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNFRPHP*KDDPLA
Trigger: GGCCAATGGGTCATCTTTCAAAGGATGTGGACGAAA...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp TTTACATATTTTGATGGTTTGACCAAGTGGGTAGTCGTTGAATTACACATCTGCATGCCATCTTCTGCCTaGACCTTTGGTGGACTTTTG +
Preference number: 5 (lower is better)
Translates to: FTYFDGLTKWVVVELHICMPSSA*TFGGLL
Trigger: CAAAAGTCCACCAAAGGTCAAGGCAGAAGATGGCAT...GCAGATGTGTAATTCAACGACTACCCACTTGGTCAAACCATCAAAATATGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS-3UTR CAA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACCTTACGAAGTCTGACTaGGTTATCTGTGGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNLTKSD*VICGFL
Trigger: CAGGAACCCACAGATAACCAAGTCAGACTTCGTAAG...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp TTTACATATTTTGATGGTTTGACCAAGTGGGTAGTCGTTGAATTACACATCTGCCTTACGAAGTCTGACTaGGTTATCTGTGGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: FTYFDGLTKWVVVELHICLTKSD*VICGFL
Trigger: CAGGAACCCACAGATAACCAAGTCAGACTTCGTAAG...GCAGATGTGTAATTCAACGACTACCCACTTGGTCAAACCATCAAAATATGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS-3UTR CAA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGGCCGTAGTCTTGGGTTaGGTTCCAGAATTGGCTACT +
Preference number: 5 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQAVVLG*VPELAT
Trigger: AGTAGCCAATTCTGGAACCAAACCCAAGACTACGGC...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAAGGACCAGGTCTTGTTTaGGAGAAAAGACATCAAACT +
Preference number: 5 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKGPGLV*EKRHQT
Trigger: AGTTTGATGTCTTTTCTCCAAAACAAGACCTGGTCC...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCGGACCAGGTCTTGTTTaGGAGAAAAGACATCAAACT +
Preference number: 5 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPGPGLV*EKRHQT
Trigger: AGTTTGATGTCTTTTCTCCAAAACAAGACCTGGTCC...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAGGACCAGGTCTTGTTTaGGAGAAAAGACATCAAACT +
Preference number: 5 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGGPGLV*EKRHQT
Trigger: AGTTTGATGTCTTTTCTCCAAAACAAGACCTGGTCC...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGTGATCACCTAGATTaGGTGTCTTTGGTTTCAGTG +
Preference number: 5 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGSDHLD*VSLVSV
Trigger: CACTGAAACCAAAGACACCAAATCTAGGTGATCACT...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp GACACTGAATCCACCTTAGACATCTATTGCCATTCAGCCAGCAACAAACACACAAAAAACTTCACTGGTTaGGGTTGGTTTTCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: DTESTLDIYCHSASNKHTKNFTG*GWFSSC
Trigger: ACAAGAAGAAAACCAACCCAAACCAGTGAAGTTTTT...TGTGTGTTTGTTGCTGGCTGAATGGCAATAGATGTCTAAGGTGGATTCAGTGTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS TCA 90 bp TGGGCTTGTGGAAGATTTAATTCTTGGAGCAGGTGCTATATGTCTTaGGTGCTTTCTCCCTGGTTCTTCTATTCTGTTTTACCTGAATAT +
Preference number: 5 (lower is better)
Translates to: WACGRFNSWSRCYMS*VLSPWFFYSVLPEY
Trigger: ATATTCAGGTAAAACAGAATAGAAGAACCAGGGAGAAAGCACTCAAGACATATAGCACCTGCTCCAAGAATTAAATCTTCCACAAGCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529018.1
CDS GCA 90 bp TCGTTGCTGAGCAATTACAGCAGAGTTAAGCAATTGTTTCTCAGGTaGAATATCTTTCACGTTCAAAGTATCCACTGCATTTACTTTGGG +
Preference number: 5 (lower is better)
Translates to: SLLSNYSRVKQLFLR*NIFHVQSIHCIYFG
Trigger: CCCAAAGTAAATGCAGTGGATACTTTGAACGTGAAAGATATTGCACCTGAGAAACAATTGCTTAACTCTGCTGTAATTGCTCAGCAACGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS-3UTR CAA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGTTGAAAGATGACCCATaGGCCTCCCAGGAAAATCTC +
Preference number: 5 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQLKDDP*ASQENL
Trigger: GAGATTTTCCTGGGAGGCCAATGGGTCATCTTTCAA...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGGTCAGGTTTCCTTCGTaGCTGAGCAATTACAGCAGA +
Preference number: 5 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQVRFPS*LSNYSR
Trigger: TCTGCTGTAATTGCTCAGCAACGAAGGAAACCTGAC...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGATGGCAGTCCTCTGTTaGTGCAAGGAGTATCCAAGA +
Preference number: 5 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQMAVLC*CKEYPR
Trigger: TCTTGGATACTCCTTGCACAAACAGAGGACTGCCAT...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGATGCCATCTTCTGCCTaGACCTTTGGTGGACTTTTG +
Preference number: 5 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQMPSSA*TFGGLL
Trigger: CAAAAGTCCACCAAAGGTCAAGGCAGAAGATGGCAT...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGGGTTTGGTTCCAGAATaGGCTACTGGAGTGGAAGAT +
Preference number: 5 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQGLVPE*ATGVED
Trigger: ATCTTCCACTCCAGTAGCCAATTCTGGAACCAAACC...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAAATCATGCTCTCTCTaGACCAAGGAAATATCGATG +
Preference number: 5 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGKSCSL*TKEISM
Trigger: CATCGATATTTCCTTGGTCAAGAGAGAGCATGATTT...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCCAGCTAAAACCATGCTaGTTAGAAGGTGTGTATTTC +
Preference number: 5 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPQLKPC*LEGVYF
Trigger: GAAATACACACCTTCTAACAAGCATGGTTTTAGCTG...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTAAGGTTTCCGAGAGTTaGTTCGTCATTAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: DTGTHTLISQENEVSSLSKVSES*FVISGS
Trigger: TGAGCCACTAATGACGAACAAACTCTCGGAAACCTT...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCCTGGTAAATTTCAGTTaGGCTGTCCAGAATTTCGAT +
Preference number: 5 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPLVNFS*AVQNFD
Trigger: ATCGAAATTCTGGACAGCCAAACTGAAATTTACCAG...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAAGTGATCACCTAGATTaGGTGTCTTTGGTTTCAGTG +
Preference number: 5 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKSDHLD*VSLVSV
Trigger: CACTGAAACCAAAGACACCAAATCTAGGTGATCACT...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTCCTACACTCCAGCTTGTAGTTTTCTTTGTTTCAGGATTAGACACAGAACCCTGTGCAAACCTTTCTTaGCTCATCTTGGTGAGAAAA +
Preference number: 5 (lower is better)
Translates to: IPTLQLVVFFVSGLDTEPCANLS*LILVRK
Trigger: TTTTCTCACCAAGATGAGCAAAGAAAGGTTTGCACA...GGGTTCTGTGTCTAATCCTGAAACAAAGAAAACTACAAGCTGGAGTGTAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS-3UTR CAA 90 bp TGTGATGGCGCTCTAAGTGACCTCAGCAGAGTTCTTGAAAATGTTCATATCCTTGGGTTGGTTTTCTTCTaGTTGCGTTTTACTATGATT +
Preference number: 5 (lower is better)
Translates to: CDGALSDLSRVLENVHILGLVFF*LRFTMI
Trigger: AATCATAGTAAAACGCAACAAGAAGAAAACCAACCC...AAGGATATGAACATTTTCAAGAACTCTGCTGAGGTCACTTAGAGCGCCATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTCTTCACTGGTTTGGGTaGGTTTTCTTCTTGTTGCGT +
Preference number: 5 (lower is better)
Translates to: DTGTHTLISQENEVSSLSLHWFG*VFFLLR
Trigger: ACGCAACAAGAAGAAAACCAACCCAAACCAGTGAAG...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGATTCAGACTGAGGTTTaGCAAAAGGGGCCTCCACAA +
Preference number: 5 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQIQTEV*QKGPPQ
Trigger: TTGTGGAGGCCCCTTTTGCAAAACCTCAGTCTGAAT...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp TTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGCTTTAAACAATCACAAGCTTCCTaGGCTTCAATTTCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: FQSRSMNTDPQQTGSSFKQSQAS*ASISCV
Trigger: AACACAAGAAATTGAAGCCAAGGAAGCTTGTGATTG...TTTAAAGCTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520226.5
CDS-3UTR CAA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGGTTCCCATTTCGTGGTaGAGATCATGGCTCTATTCT +
Preference number: 5 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQVPISW*RSWLYS
Trigger: AGAATAGAGCCATGATCTCAACCACGAAATGGGAAC...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGCATCTTTTTCCATACTaGCCTGCAAGCTGTCAGCTA +
Preference number: 5 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQHLFPY*PASCQL
Trigger: TAGCTGACAGCTTGCAGGCAAGTATGGAAAAAGATG...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACAGCAGAGTTAAGCAATaGTTTCTCAGGTGCAATATC +
Preference number: 5 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHSRVKQ*FLRCNI
Trigger: GATATTGCACCTGAGAAACAATTGCTTAACTCTGCT...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp AGGATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAAATCCAAGAACTCATTTaGTACTACATTGCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: RIRHRTHSSRTGKSSRNKIQELI*YYIAGA
Trigger: AGCACCTGCAATGTAGTACAAAATGAGTTCTTGGAT...TTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp CAGTCTTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGATTCATCACCGCACATTaGTTTAAAGTATTTAGACGC +
Preference number: 5 (lower is better)
Translates to: QSYIFQSRSMNTDPQQTGFITAH*FKVFRR
Trigger: GCGTCTAAATACTTTAAACAAATGTGCGGTGATGAA...TCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAAGACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACCAGCTAAAACCATGCTaGTTAGAAGGTGTGTATTTC +
Preference number: 5 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHQLKPC*LEGVYF
Trigger: GAAATACACACCTTCTAACAAGCATGGTTTTAGCTG...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGGAATTTCGATCACTTTaGAATCCAACAGGTCTACAT +
Preference number: 5 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQEFRSL*NPTGLH
Trigger: ATGTAGACCTGTTGGATTCAAAAGTGATCGAAATTC...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp TTACATATTCCAGTCAAGGTCTATGAATACAGACCCTCAACAAACAGGAAGCAGAATGTCCAAAAGATTTaGTGTACCATTCTGGCATGT +
Preference number: 5 (lower is better)
Translates to: LHIPVKVYEYRPSTNRKQNVQKI*CTILAC
Trigger: ACATGCCAGAATGGTACACAAAATCTTTTGGACATT...CTGCTTCCTGTTTGTTGAGGGTCTGTATTCATAGACCTTGACTGGAATATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS GCA 90 bp CTTGTGGAAGATTTAATTCTTGGAGCAGGTGCTATATGTCTTGAGTaGTTTCTCCCTGGTTCTTCTATTCTGTTTTACCTGAATATTACA +
Preference number: 5 (lower is better)
Translates to: LVEDLILGAGAICLE*FLPGSSILFYLNIT
Trigger: TGTAATATTCAGGTAAAACAGAATAGAAGAACCAGGGAGAAAGCACTCAAGACATATAGCACCTGCTCCAAGAATTAAATCTTCCACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529018.1
CDS-3UTR CAA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGAGAAACTTGGTTACTTaGTATGATGGGCAGTGCCTT +
Preference number: 5 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQRNLVT*YDGQCL
Trigger: AAGGCACTGCCCATCATACAAAGTAACCAAGTTTCT...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp AATTGTGGTTGCAGTTACAAGGAAGACCCCAAGAAACACATATCTTATTCTAACATCCAAGAACTCATTTaGTACTACATTGCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: NCGCSYKEDPKKHISYSNIQELI*YYIAGA
Trigger: AGCACCTGCAATGTAGTACAAAATGAGTTCTTGGAT...GTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTTGTAACTGCAACCACAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACTTCATCACCGCACATTaGTTTAAAGTATTTAGACGC +
Preference number: 5 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHFITAH*FKVFRR
Trigger: GCGTCTAAATACTTTAAACAAATGTGCGGTGATGAA...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp ATTAGACACAGAACCCATTCTTCAAGGACTGGCAAAAGTTCTAGAAACAAACACGAATTTCGATCACTTTaGAATCCAACAGGTCTACAT +
Preference number: 5 (lower is better)
Translates to: IRHRTHSSRTGKSSRNKHEFRSL*NPTGLH
Trigger: ATGTAGACCTGTTGGATTCAAAAGTGATCGAAATTC...GTGTTTGTTTCTAGAACTTTTGCCAGTCCTTGAAGAATGGGTTCTGTGTCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000512044.6
ENST00000520226.5
CDS-3UTR CAA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTAGGCATAAATCAGCATaGTTATCCTCATCAGAAACA +
Preference number: 5 (lower is better)
Translates to: DTGTHTLISQENEVSSLSRHKSA*LSSSET
Trigger: TGTTTCTGATGAGGATAACAATGCTGATTTATGCCT...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS-3UTR CAA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGAGCAGAGTTAAGCAATaGTTTCTCAGGTGCAATATC +
Preference number: 5 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQSRVKQ*FLRCNI
Trigger: GATATTGCACCTGAGAAACAATTGCTTAACTCTGCT...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp GACACAGGTACGCATACACTGATATCACAAGAGAATGAAGTATCTTCATTATCTTTCATCACCGCACATTaGTTTAAAGTATTTAGACGC +
Preference number: 5 (lower is better)
Translates to: DTGTHTLISQENEVSSLSFITAH*FKVFRR
Trigger: GCGTCTAAATACTTTAAACAAATGTGCGGTGATGAA...AGATAATGAAGATACTTCATTCTCTTGTGATATCAGTGTATGCGTACCTGTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276297.9
ENST00000358919.6
CDS CCA 90 bp CAGGTGCAATATCTTTCACGTTCAAAGTATCCACTGCATTTACTTTaGGTGCATCTTTTATTTCACTTAAGCTTATTTCATTGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: QVQYLSRSKYPLHLL*VHLLFHLSLFHCKA
Trigger: AGCTTTGCAATGAAATAAGCTTAAGTGAAATAAAAGATGCACCCAAAGTAAATGCAGTGGATACTTTGAACGTGAAAGATATTGCACCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS-3UTR CAA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGAGGCATAAATCAGCATaGTTATCCTCATCAGAAACA +
Preference number: 5 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQRHKSA*LSSSET
Trigger: TGTTTCTGATGAGGATAACAATGCTGATTTATGCCT...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGCTTAAGCTTATTTCATaGCAAAGCTCCAGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQLKLIS*QSSRLL
Trigger: TAAAAGCCTGGAGCTTTGCAATGAAATAAGCTTAAG...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS-3UTR CAA 90 bp AAGGAAGACCCCAAGAAACACATATCTTATTCTAACACAATGTCATTATGTCAGTCCACTGCATTTACTTaGGGTGCATCTTTTATTTCA +
Preference number: 5 (lower is better)
Translates to: KEDPKKHISYSNTMSLCQSTAFT*GASFIS
Trigger: TGAAATAAAAGATGCACCCAAAGTAAATGCAGTGGA...CTGACATAATGACATTGTGTTAGAATAAGATATGTGTTTCTTGGGGTCTTCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511869.1
CDS GCA 72 bp CGCCGCGACCATGCCTCGGTACTCCGCCCCGCGCTGTaGTCCCGGCCGCAGGCTGTCGCCTGCCTTCAGGAG +
Preference number: 6 (lower is better)
Translates to: RRDHASVLRPAL*SRPQAVACLQE
Trigger: CTCCTGAAGGCAGGCGACAGCCTGCGGCCGGGAGCACAGCGCGGGGCGGAGTACCGAGGCATGGTCGCGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512044.6
CDS CAA 72 bp CCCGAGACGCGCGCCCTCGCGGTCCTCAACGCATCCTaGCTCGCCGCTCCCTGCCCCTCGTCACGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: PETRALAVLNAS*LAAPCPSSRPQ
Trigger: CTGGGGCCGTGACGAGGGGCAGGGAGCGGCGAGCAAGGATGCGTTGAGGACCGCGAGGGCGCGCGTCTCGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358919.6
ENST00000515225.1
CDS GCA 72 bp CCGAGACGCGCGCCCTCGCGGTCCTCAACGCATCCTTaGTCGCCGCTCCCTGCCCCTCGTCACGGCCCCAGA +
Preference number: 6 (lower is better)
Translates to: PRRAPSRSSTHP*SPLPAPRHGPR
Trigger: TCTGGGGCCGTGACGAGGGGCAGGGAGCGGCGAGCAAGGATGCGTTGAGGACCGCGAGGGCGCGCGTCTCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358919.6
ENST00000515225.1
CDS CAA 72 bp GGCCGCAGGCTGTCGCCTGCCTTCAGGAGGCCGGCATaGCGGCTGGCACTGCGGCCCCGGGAAGCGCCAACT +
Preference number: 6 (lower is better)
Translates to: GRRLSPAFRRPA*RLALRPREAPT
Trigger: AGTTGGCGCTTCCCGGGGCCGCAGTGCCAGCCGCAATGCCGGCCTCCTGAAGGCAGGCGACAGCCTGCGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512044.6
CDS CAA 90 bp ACGGCGGCACCCGAGACGCGCGCCCTCGCGGTCCTCAACGCATCCTaGCTCGCCGCTCCCTGCCCCTCGTCACGGCCCCAGAAAGAAAGC +
Preference number: 6 (lower is better)
Translates to: TAAPETRALAVLNAS*LAAPCPSSRPQKES
Trigger: GCTTTCTTTCTGGGGCCGTGACGAGGGGCAGGGAGCGGCGAGCAAGGATGCGTTGAGGACCGCGAGGGCGCGCGTCTCGGGTGCCGCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358919.6
ENST00000515225.1
CDS CCA 72 bp CCAGTGCTGCTGAGGCTGCGGACGGAAGACACCTCCTaGCGCTCGCTGAGGTCCATCAGCGTGCCTCCGGGG +
Preference number: 6 (lower is better)
Translates to: PVLLRLRTEDTS*RSLRSISVPPG
Trigger: CCCCGGAGGCACGCTGATGGACCTCAGCGAGCGCCAGGAGGTGTCTTCCGTCCGCAGCCTCAGCAGCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS GCA 72 bp CTCGCGGTCCTCAACGCATCCTTGCTCGCCGCTCCCTaGCCCTCGTCACGGCCCCAGAAAGAAAGCGGGGTT +
Preference number: 6 (lower is better)
Translates to: LAVLNASLLAAP*PSSRPQKESGV
Trigger: AACCCCGCTTTCTTTCTGGGGCCGTGACGAGGGGCAGGGAGCGGCGAGCAAGGATGCGTTGAGGACCGCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358919.6
ENST00000515225.1
CDS CCA 72 bp CCAGATCCGCCAGGTCCCCTGAACTGGAGTAGAGGATaGAGCCCGGCACGTTGTCGTAGATGCTCAGGCGGC +
Preference number: 6 (lower is better)
Translates to: PDPPGPLNWSRG*SPARCRRCSGG
Trigger: GCCGCCTGAGCATCTACGACAACGTGCCGGGCTCCATCCTCTACTCCAGTTCAGGGGACCTGGCGGATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CCA 72 bp CCGCGCTGCTGGTCTCCGACTGGCTGCTGCTGCTGCTaGTCTGCGTGGAGTTGGAAACGCTCCTCTTTCGTA +
Preference number: 6 (lower is better)
Translates to: PRCWSPTGCCCC*SAWSWKRSSFV
Trigger: TACGAAAGAGGAGCGTTTCCAACTCCACGCAGACCAGCAGCAGCAGCAGCCAGTCGGAGACCAGCAGCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CAA 72 bp GGGATCTCGGAGGGCTCTTCCGGTTCATTCAGGGAGTaGCCTGTGCTGTCCAGGTCGCTGGGTGTGGTTCGG +
Preference number: 6 (lower is better)
Translates to: GISEGSSGSFRE*PVLSRSLGVVR
Trigger: CCGAACCACACCCAGCGACCTGGACAGCACAGGCAACTCCCTGAATGAACCGGAAGAGCCCTCCGAGATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CAA 90 bp CGCTGGGTGTGGTTCGGTCGTTGTCCACATCCAGGTGTATCTGTTTaGGAGAGGACGGGCAGGGAGAGACCGAGTCCAGGGCTGAGTCCG +
Preference number: 6 (lower is better)
Translates to: RWVWFGRCPHPGVSV*ERTGRERPSPGLSP
Trigger: CGGACTCAGCCCTGGACTCGGTCTCTCCCTGCCCGTCCTCTCCAAAACAGATACACCTGGATGTGGACAACGACCGAACCACACCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS GCA 72 bp CGGAGGGCTCTTCCGGTTCATTCAGGGAGTTGCCTGTaGTGTCCAGGTCGCTGGGTGTGGTTCGGTCGTTGT +
Preference number: 6 (lower is better)
Translates to: RRALPVHSGSCL*CPGRWVWFGRC
Trigger: ACAACGACCGAACCACACCCAGCGACCTGGACAGCACAGGCAACTCCCTGAATGAACCGGAAGAGCCCTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS GCA 72 bp GGATCTCGGAGGGCTCTTCCGGTTCATTCAGGGAGTTaGCTGTGCTGTCCAGGTCGCTGGGTGTGGTTCGGT +
Preference number: 6 (lower is better)
Translates to: GSRRALPVHSGS*LCCPGRWVWFG
Trigger: ACCGAACCACACCCAGCGACCTGGACAGCACAGGCAACTCCCTGAATGAACCGGAAGAGCCCTCCGAGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CAA 90 bp CTGCTGGTCTCCGACTGGCTGCTGCTGCTGCTGGTCTGCGTGGAGTaGGAAACGCTCCTCTTTCGTACCATGGGGACGTTGATGCGGTTG +
Preference number: 6 (lower is better)
Translates to: LLVSDWLLLLLVCVE*ETLLFRTMGTLMRL
Trigger: CAACCGCATCAACGTCCCCATGGTACGAAAGAGGAGCGTTTCCAACTCCACGCAGACCAGCAGCAGCAGCAGCCAGTCGGAGACCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CAA 90 bp CTTCTTTCCGGGATCTCGGAGGGCTCTTCCGGTTCATTCAGGGAGTaGCCTGTGCTGTCCAGGTCGCTGGGTGTGGTTCGGTCGTTGTCC +
Preference number: 6 (lower is better)
Translates to: LLSGISEGSSGSFRE*PVLSRSLGVVRSLS
Trigger: GGACAACGACCGAACCACACCCAGCGACCTGGACAGCACAGGCAACTCCCTGAATGAACCGGAAGAGCCCTCCGAGATCCCGGAAAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS GCA 72 bp GGGAGAGGGCAGGCTGCCGAAAGAGTCGTCATTGCCTaGCAAGTTGCTGGAGGAGCAAACGCTGATGACGGA +
Preference number: 6 (lower is better)
Translates to: GRGQAAERVVIA*QVAGGANADDG
Trigger: TCCGTCATCAGCGTTTGCTCCTCCAGCAACTTGGCAGGCAATGACGACTCTTTCGGCAGCCTGCCCTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CCA 72 bp TGGTCTCCGACTGGCTGCTGCTGCTGCTGGTCTGCGTaGAGTTGGAAACGCTCCTCTTTCGTACCATGGGGA +
Preference number: 6 (lower is better)
Translates to: WSPTGCCCCWSA*SWKRSSFVPWG
Trigger: TCCCCATGGTACGAAAGAGGAGCGTTTCCAACTCCACGCAGACCAGCAGCAGCAGCAGCCAGTCGGAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CCA 72 bp CTGTTTTCCCTCCTGAGGCTGATGTGGCCAGGGCCGTaGAAGCTTCCCGTCCTCCAGTTCACAGAGCCGTTA +
Preference number: 6 (lower is better)
Translates to: LFSLLRLMWPGP*KLPVLQFTEPL
Trigger: TAACGGCTCTGTGAACTGGAGGACGGGAAGCTTCCACGGCCCTGGCCACATCAGCCTCAGGAGGGAAAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CCA 72 bp CAACGGTTGTCCTGTGCGCTGCACGTTGACCGTCAGTaGGACCCCAAACACACTCCGGTCCTTGTAGTCTGG +
Preference number: 6 (lower is better)
Translates to: QRLSCALHVDRQ*DPKHTPVLVVW
Trigger: CCAGACTACAAGGACCGGAGTGTGTTTGGGGTCCCACTGACGGTCAACGTGCAGCGCACAGGACAACCGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000510318.5
ENST00000512044.6
ENST00000513883.5
ENST00000520226.5
CDS CAA 90 bp AGGGAGTTGCCTGTGCTGTCCAGGTCGCTGGGTGTGGTTCGGTCGTaGTCCACATCCAGGTGTATCTGTTTTGGAGAGGACGGGCAGGGA +
Preference number: 6 (lower is better)
Translates to: RELPVLSRSLGVVRS*STSRCICFGEDGQG
Trigger: TCCCTGCCCGTCCTCTCCAAAACAGATACACCTGGATGTGGACAACGACCGAACCACACCCAGCGACCTGGACAGCACAGGCAACTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CAA 90 bp GTCTGCGTGGAGTTGGAAACGCTCCTCTTTCGTACCATGGGGACGTaGATGCGGTTGCCATTGAGGGCGGAGATCTCCACGCAGTTGAGC +
Preference number: 6 (lower is better)
Translates to: VCVELETLLFRTMGT*MRLPLRAEISTQLS
Trigger: GCTCAACTGCGTGGAGATCTCCGCCCTCAATGGCAACCGCATCAACGTCCCCATGGTACGAAAGAGGAGCGTTTCCAACTCCACGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS TCA 72 bp TGGAGAGGACGGGCAGGGAGAGACCGAGTCCAGGGCTaGGTCCGAATCTCCCTCATCAGAAAACTTCTCCGA +
Preference number: 6 (lower is better)
Translates to: WRGRAGRDRVQG*VRISLIRKLLR
Trigger: TCGGAGAAGTTTTCTGATGAGGGAGATTCGGACTCAGCCCTGGACTCGGTCTCTCCCTGCCCGTCCTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CCA 72 bp GGAAACCAGTTGCCCGTAGCCAATCACAAGCTTCCTTaGCTTCAATTTCTGGGTCCGCGCCGGGCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: GNQLPVANHKLP*LQFLGPRRAAP
Trigger: AGGAGCAGCCCGGCGCGGACCCAGAAATTGAAGCCAAGGAAGCTTGTGATTGGCTACGGGCAACTGGTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503161.6
ENST00000509922.5
CDS CAA 90 bp CTGGACAGTTCCTTGGGAGAGGGCAGGCTGCCGAAAGAGTCGTCATaGCCTGCCAAGTTGCTGGAGGAGCAAACGCTGATGACGGAGTTA +
Preference number: 6 (lower is better)
Translates to: LDSSLGEGRLPKESS*PAKLLEEQTLMTEL
Trigger: TAACTCCGTCATCAGCGTTTGCTCCTCCAGCAACTTGGCAGGCAATGACGACTCTTTCGGCAGCCTGCCCTCTCCCAAGGAACTGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CAA 90 bp GGGACGTTGATGCGGTTGCCATTGAGGGCGGAGATCTCCACGCAGTaGAGCTGCTTCAGCTTCTCCTCATCCATCCCCTCTTGCAAGATG +
Preference number: 6 (lower is better)
Translates to: GTLMRLPLRAEISTQ*SCFSFSSSIPSCKM
Trigger: CATCTTGCAAGAGGGGATGGATGAGGAGAAGCTGAAGCAGCTCAACTGCGTGGAGATCTCCGCCCTCAATGGCAACCGCATCAACGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS GCA 72 bp TGGAGCCCGGCACGTTGTCGTAGATGCTCAGGCGGCTaGTCATGGAGCTGGAAGAATTGCGTCTCTTCAGTT +
Preference number: 6 (lower is better)
Translates to: WSPARCRRCSGG*SWSWKNCVSSV
Trigger: AACTGAAGAGACGCAATTCTTCCAGCTCCATGAGCAGCCGCCTGAGCATCTACGACAACGTGCCGGGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS GCA 72 bp CAATTTGTGTTAGGATCATGGTGTCCGGCTTCTTTCTaGACATCAAGCACGGCAGGCGGCGGCGGAAGCGCT +
Preference number: 6 (lower is better)
Translates to: QFVLGSWCPASF*TSSTAGGGGSA
Trigger: AGCGCTTCCGCCGCCGCCTGCCGTGCTTGATGTGCAGAAAGAAGCCGGACACCATGATCCTAACACAAATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358919.6
ENST00000515225.1
CDS CCA 72 bp CCGGCACGTTGTCGTAGATGCTCAGGCGGCTGCTCATaGAGCTGGAAGAATTGCGTCTCTTCAGTTCCTTGG +
Preference number: 6 (lower is better)
Translates to: PARCRRCSGGCS*SWKNCVSSVPW
Trigger: CCAAGGAACTGAAGAGACGCAATTCTTCCAGCTCCATGAGCAGCCGCCTGAGCATCTACGACAACGTGCCGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CCA 72 bp TCAGGGAGTTGCCTGTGCTGTCCAGGTCGCTGGGTGTaGTTCGGTCGTTGTCCACATCCAGGTGTATCTGTT +
Preference number: 6 (lower is better)
Translates to: SGSCLCCPGRWV*FGRCPHPGVSV
Trigger: AACAGATACACCTGGATGTGGACAACGACCGAACCACACCCAGCGACCTGGACAGCACAGGCAACTCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CAA 72 bp GGCAGGCTGCCGAAAGAGTCGTCATTGCCTGCCAAGTaGCTGGAGGAGCAAACGCTGATGACGGAGTTAGTC +
Preference number: 6 (lower is better)
Translates to: GRLPKESSLPAK*LEEQTLMTELV
Trigger: GACTAACTCCGTCATCAGCGTTTGCTCCTCCAGCAACTTGGCAGGCAATGACGACTCTTTCGGCAGCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CAA 72 bp CTCTTTCGTACCATGGGGACGTTGATGCGGTTGCCATaGAGGGCGGAGATCTCCACGCAGTTGAGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: LFRTMGTLMRLP*RAEISTQLSCF
Trigger: GAAGCAGCTCAACTGCGTGGAGATCTCCGCCCTCAATGGCAACCGCATCAACGTCCCCATGGTACGAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CAA 72 bp GAGTTGGAAACGCTCCTCTTTCGTACCATGGGGACGTaGATGCGGTTGCCATTGAGGGCGGAGATCTCCACG +
Preference number: 6 (lower is better)
Translates to: ELETLLFRTMGT*MRLPLRAEIST
Trigger: CGTGGAGATCTCCGCCCTCAATGGCAACCGCATCAACGTCCCCATGGTACGAAAGAGGAGCGTTTCCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CAA 72 bp AAAGGATCGAAGCCCTCTAAGTACATGCCCACCCGCTaGTTGCACGCACTGAGGCTCCGGGTCCTCGTAACA +
Preference number: 6 (lower is better)
Translates to: KGSKPSKYMPTR*LHALRLRVLVT
Trigger: TGTTACGAGGACCCGGAGCCTCAGTGCGTGCAACAAGCGGGTGGGCATGTACTTAGAGGGCTTCGATCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS TCA 72 bp ATCAGGAACGTGCCGCCGCAGGTTTGTTGGTGTGCCTaGTGGAGAGGAGCTGGTGCTGAGGGCATTTTCTAT +
Preference number: 6 (lower is better)
Translates to: IRNVPPQVCWCA*WRGAGAEGIFY
Trigger: ATAGAAAATGCCCTCAGCACCAGCTCCTCTCCATCAGGCACACCAACAAACCTGCGGCGGCACGTTCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS TCA 72 bp TTGAGGGCGCTTTGTGCTTGCTGTGATGGGAGCTCTTaGGCTTCAGGCTCTCCATCCGTTTCAGCAGACTGC +
Preference number: 6 (lower is better)
Translates to: LRALCACCDGSS*ASGSPSVSADC
Trigger: GCAGTCTGCTGAAACGGATGGAGAGCCTGAAGCTCAAGAGCTCCCATCACAGCAAGCACAAAGCGCCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS TCA 72 bp ATCAACCCCAGCTTTGAGGGCGCTTTGTGCTTGCTGTaGTGGGAGCTCTTGAGCTTCAGGCTCTCCATCCGT +
Preference number: 6 (lower is better)
Translates to: INPSFEGALCLL*WELLSFRLSIR
Trigger: ACGGATGGAGAGCCTGAAGCTCAAGAGCTCCCATCACAGCAAGCACAAAGCGCCCTCAAAGCTGGGGTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS TCA 72 bp TTGCAAGATGGGCCCGCTGATGATCAACCCCAGCTTTaGGGGCGCTTTGTGCTTGCTGTGATGGGAGCTCTT +
Preference number: 6 (lower is better)
Translates to: LQDGPADDQPQL*GRFVLAVMGAL
Trigger: AAGAGCTCCCATCACAGCAAGCACAAAGCGCCCTCAAAGCTGGGGTTGATCATCAGCGGGCCCATCTTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CCA 72 bp CGTTGTCGTAGATGCTCAGGCGGCTGCTCATGGAGCTaGAAGAATTGCGTCTCTTCAGTTCCTTGGGGCTGT +
Preference number: 6 (lower is better)
Translates to: RCRRCSGGCSWS*KNCVSSVPWGC
Trigger: ACAGCCCCAAGGAACTGAAGAGACGCAATTCTTCCAGCTCCATGAGCAGCCGCCTGAGCATCTACGACAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CCA 72 bp CAACCTGATCCAAACAATGGTTCCGGAGGTATCGCATaGCCTGCTGGATGCTCTGAGGCAACGGTTGTCCTG +
Preference number: 6 (lower is better)
Translates to: QPDPNNGSGGIA*PAGCSEATVVL
Trigger: CAGGACAACCGTTGCCTCAGAGCATCCAGCAGGCCATGCGATACCTCCGGAACCATTGTTTGGATCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000510318.5
ENST00000512044.6
ENST00000513883.5
ENST00000520226.5
CDS CCA 72 bp CTGGGAGAGGAATTCTCTCTCTTCAGGGTGTTGAGATaGAAGAGGGAAGGCGCTAAGCACACGGCCAGGTTG +
Preference number: 6 (lower is better)
Translates to: LGEEFSLFRVLR*KREGAKHTARL
Trigger: CAACCTGGCCGTGTGCTTAGCGCCTTCCCTCTTCCATCTCAACACCCTGAAGAGAGAGAATTCCTCTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
CDS TCA 72 bp TTACCCTGGGAGAGGAATTCTCTCTCTTCAGGGTGTTaGGATGGAAGAGGGAAGGCGCTAAGCACACGGCCA +
Preference number: 6 (lower is better)
Translates to: LPWERNSLSSGC*DGRGKALSTRP
Trigger: TGGCCGTGTGCTTAGCGCCTTCCCTCTTCCATCTCAACACCCTGAAGAGAGAGAATTCCTCTCCCAGGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
CDS TCA 72 bp ATCCACACAGTCCTGGAGGAAGTGTTGGTAGTCAGCTaGGTCATCATTACCCAGGTGCCCGAGTGCTTCCAG +
Preference number: 6 (lower is better)
Translates to: IHTVLEEVLVVS*VIITQVPECFQ
Trigger: CTGGAAGCACTCGGGCACCTGGGTAATGATGACTCAGCTGACTACCAACACTTCCTCCAGGACTGTGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
CDS TCA 72 bp ACATTAACCCTCACACCCACCACAGGTGCGCGATCGTaGTCCACAGAGGTTAGTAAAAGGGCACAGGCTCCT +
Preference number: 6 (lower is better)
Translates to: TLTLTPTTGARS*STEVSKRAQAP
Trigger: AGGAGCCTGTGCCCTTTTACTAACCTCTGTGGATCACGATCGCGCACCTGTGGTGGGTGTGAGGGTTAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
ENST00000521730.1
CDS CAA 90 bp ATTACCCAGGTGCCCGAGTGCTTCCAGAGTGAGGGGCTTCAGCTCTaGTTCGGTATAGGAATTACGACATCGGCTCATTTCCTCGGGAAC +
Preference number: 6 (lower is better)
Translates to: ITQVPECFQSEGLQL*FGIGITTSAHFLGN
Trigger: GTTCCCGAGGAAATGAGCCGATGTCGTAATTCCTATACCGAACAAGAGCTGAAGCCCCTCACTCTGGAAGCACTCGGGCACCTGGGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
CDS TCA 72 bp GAGTGCAGTGTTCTGCCAGGCACACACCGGCCTAGGTaGTGTTTTCTTCTCCAGCAACATGGAAAAGCCTCT +
Preference number: 6 (lower is better)
Translates to: ECSVLPGTHRPR*CFLLQQHGKAS
Trigger: AGAGGCTTTTCCATGTTGCTGGAGAAGAAAACATCACCTAGGCCGGTGTGTGCCTGGCAGAACACTGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316609.9
ENST00000506171.1
CDS GCA 72 bp TCCAGCAGGGCCGTTAGCTTTAGGAGTGAGTATTTCTaGAGCAGGTTCATCTGGGCCACAGACTGGCAGTTA +
Preference number: 6 (lower is better)
Translates to: SSRAVSFRSEYF*SRFIWATDWQL
Trigger: TAACTGCCAGTCTGTGGCCCAGATGAACCTGCTGCAGAAATACTCACTCCTAAAGCTAACGGCCCTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS GCA 72 bp ATGGCACAAGGCTCATCCTCGTCTGAATCGTCACTCTaGAAAGACAGAAAGGAGCCATTCACACACTGGGGC +
Preference number: 6 (lower is better)
Translates to: MAQGSSSSESSL*KDRKEPFTHWG
Trigger: GCCCCAGTGTGTGAATGGCTCCTTTCTGTCTTTGCAGAGTGACGATTCAGACGAGGATGAGCCTTGTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510250.2
CDS CCA 72 bp AACTCTTCAAGCCGGGACCACCTCTTGCTGTCCCTTTaGAAAGTCCATTTGCCACTGATGGCACAAGGCTCA +
Preference number: 6 (lower is better)
Translates to: NSSSRDHLLLSL*KVHLPLMAQGS
Trigger: TGAGCCTTGTGCCATCAGTGGCAAATGGACTTTCCAAAGGGACAGCAAGAGGTGGTCCCGGCTTGAAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000503161.6
ENST00000509922.5
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CAA 72 bp AAACTCTTCAAGCCGGGACCACCTCTTGCTGTCCCTTaGGAAAGTCCATTTGCCACTGATGGCACAAGGCTC +
Preference number: 6 (lower is better)
Translates to: KLFKPGPPLAVP*ESPFATDGTRL
Trigger: GAGCCTTGTGCCATCAGTGGCAAATGGACTTTCCAAAGGGACAGCAAGAGGTGGTCCCGGCTTGAAGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000503161.6
ENST00000509922.5
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CAA 72 bp GTGCCCGAGTGCTTCCAGAGTGAGGGGCTTCAGCTCTaGTTCGGTATAGGAATTACGACATCGGCTCATTTC +
Preference number: 6 (lower is better)
Translates to: VPECFQSEGLQL*FGIGITTSAHF
Trigger: GAAATGAGCCGATGTCGTAATTCCTATACCGAACAAGAGCTGAAGCCCCTCACTCTGGAAGCACTCGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
CDS TCA 72 bp GGAGAGGAGCTGGTGCTGAGGGCATTTTCTATGTCCTaGTCAAGCTGGTCCAGTTTCATAATCAGCAGCACC +
Preference number: 6 (lower is better)
Translates to: GEELVLRAFSMS*SSWSSFIISST
Trigger: GGTGCTGCTGATTATGAAACTGGACCAGCTTGATCAGGACATAGAAAATGCCCTCAGCACCAGCTCCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS TCA 72 bp AGTCATCATTACCCAGGTGCCCGAGTGCTTCCAGAGTaGGGGGCTTCAGCTCTTGTTCGGTATAGGAATTAC +
Preference number: 6 (lower is better)
Translates to: SHHYPGARVLPE*GASALVRYRNY
Trigger: GTAATTCCTATACCGAACAAGAGCTGAAGCCCCTCACTCTGGAAGCACTCGGGCACCTGGGTAATGATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
CDS TCA 72 bp CCATTTGCCACTGATGGCACAAGGCTCATCCTCGTCTaGATCGTCACTCTGCATAGAGCCTCAATGGCATCT +
Preference number: 6 (lower is better)
Translates to: PFATDGTRLILV*IVTLHRASMAS
Trigger: AGATGCCATTGAGGCTCTATGCAGAGTGACGATTCAGACGAGGATGAGCCTTGTGCCATCAGTGGCAAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509922.5
ENST00000515225.1
CDS CCA 72 bp TTCCCTTTTAGCTTTCGGGACCCTGTTGACAGGCTTTaGAGCCCACTCTCCTATTTGCTTGGTCTGAAGGAC +
Preference number: 6 (lower is better)
Translates to: FPFSFRDPVDRL*SPLSYLLGLKD
Trigger: GTCCTTCAGACCAAGCAAATAGGAGAGTGGGCTCCAAAGCCTGTCAACAGGGTCCCGAAAGCTAAAAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506171.1
CDS CAA 72 bp GCCACAGACTGGCAGTTAATCTGTAGTGATACAGAGTaGAGGCTTGGCCGATGTGAGCTCTGGAAACTGTGC +
Preference number: 6 (lower is better)
Translates to: ATDWQLICSDTE*RLGRCELWKLC
Trigger: GCACAGTTTCCAGAGCTCACATCGGCCAAGCCTCAACTCTGTATCACTACAGATTAACTGCCAGTCTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS CAA 90 bp CCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTGATCACCTAGATTaGGTGTCTTTGGTTTCAGTGTTCTGGTTACTGAAGGAATCCCGG +
Preference number: 6 (lower is better)
Translates to: PWWWKRLRCFSDHLD*VSLVSVFWLLKESR
Trigger: CCGGGATTCCTTCAGTAACCAGAACACTGAAACCAAAGACACCAAATCTAGGTGATCACTGAAGCAACGCAACCGCTTCCACCACCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
CDS TCA 72 bp AATCTCCCTCATCAGAAAACTTCTCCGACCACTGATTaGCTATCCGCTGCATCCCCTTCACGTGGTAGAGGA +
Preference number: 6 (lower is better)
Translates to: NLPHQKTSPTTD*LSAASPSRGRG
Trigger: TCCTCTACCACGTGAAGGGGATGCAGCGGATAGTCAATCAGTGGTCGGAGAAGTTTTCTGATGAGGGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510250.2
ENST00000512044.6
ENST00000520226.5
CDS TCA 72 bp ACAGGCTTTGGAGCCCACTCTCCTATTTGCTTGGTCTaGAGGACCTTGCAGCTTTGCACTGTCAAACATGAC +
Preference number: 6 (lower is better)
Translates to: TGFGAHSPICLV*RTLQLCTVKHD
Trigger: GTCATGTTTGACAGTGCAAAGCTGCAAGGTCCTTCAGACCAAGCAAATAGGAGAGTGGGCTCCAAAGCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506171.1
CDS GCA 72 bp TCCTGGGTGGCCAGGGTCTCCTTTAATTGTAAACACTaGATGCCATCTTCTGCCTTGACCTTTGGTGGACTT +
Preference number: 6 (lower is better)
Translates to: SWVARVSFNCKH*MPSSALTFGGL
Trigger: AAGTCCACCAAAGGTCAAGGCAGAAGATGGCATGCAGTGTTTACAATTAAAGGAGACCCTGGCCACCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
ENST00000517868.2
CDS CCA 72 bp ATGATGGGCAGTGCCTTTTCTAAGGAGCCTGCTCCTTaGATCATATGTTGGCCTGATGTTTTCTGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: MMGSAFSKEPAP*IICWPDVFCPW
Trigger: CCAAGGGCAGAAAACATCAGGCCAACATATGATCCAAGGAGCAGGCTCCTTAGAAAAGGCACTGCCCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS CCA 72 bp GGGTTTGGTTCCAGAATTGGCTACTGGAGTGGAAGATaGGAGGTCCGTGGACTCAGTGTCAGAAGACAAATT +
Preference number: 6 (lower is better)
Translates to: GFGSRIGYWSGR*EVRGLSVRRQI
Trigger: AATTTGTCTTCTGACACTGAGTCCACGGACCTCCCATCTTCCACTCCAGTAGCCAATTCTGGAACCAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS CCA 72 bp GGAAACCAGTTGCCCGTAGCCAATCACAAGCTTCCTTaGCTTCAATTTGTGTTAGGATCATGGTGTCCGGCT +
Preference number: 6 (lower is better)
Translates to: GNQLPVANHKLP*LQFVLGSWCPA
Trigger: AGCCGGACACCATGATCCTAACACAAATTGAAGCCAAGGAAGCTTGTGATTGGCTACGGGCAACTGGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358919.6
ENST00000515225.1
CDS CCA 72 bp TGCATATGTCTTACCTTTCTCTTACGAAGTCTGACTTaGTTATCTGTGGGTTCCTGGGTGGCCAGGGTCTCC +
Preference number: 6 (lower is better)
Translates to: CICLTFLLRSLT*LSVGSWVARVS
Trigger: GGAGACCCTGGCCACCCAGGAACCCACAGATAACCAAGTCAGACTTCGTAAGAGAAAGGTAAGACATATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS TCA 72 bp CTCGATCTTCTCTTATTTCCTTTCTCTTACGAAGTCTaGCTTGGTTATCTGTGGGTTCCTGGGTGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: LDLLLFPFSYEV*LGYLWVPGWPG
Trigger: CCCTGGCCACCCAGGAACCCACAGATAACCAAGTCAGACTTCGTAAGAGAAAGGAAATAAGAGAAGATCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS TCA 72 bp ATCTGTGCATATGTCTTACCTTTCTCTTACGAAGTCTaGCTTGGTTATCTGTGGGTTCCTGGGTGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: ICAYVLPFSYEV*LGYLWVPGWPG
Trigger: CCCTGGCCACCCAGGAACCCACAGATAACCAAGTCAGACTTCGTAAGAGAAAGGTAAGACATATGCACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517868.2
CDS CCA 72 bp CTCTTACGAAGTCTGACTTGGTTATCTGTGGGTTCCTaGGTGGCCAGGGTCTCCTTTAATTGTAAACACTGC +
Preference number: 6 (lower is better)
Translates to: LLRSLTWLSVGS*VARVSFNCKHC
Trigger: GCAGTGTTTACAATTAAAGGAGACCCTGGCCACCCAGGAACCCACAGATAACCAAGTCAGACTTCGTAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
ENST00000517868.2
CDS CCA 72 bp TCTTCTCTTATTTCCTTTCTCTTACGAAGTCTGACTTaGTTATCTGTGGGTTCCTGGGTGGCCAGGGTCTCC +
Preference number: 6 (lower is better)
Translates to: SSLISFLLRSLT*LSVGSWVARVS
Trigger: GGAGACCCTGGCCACCCAGGAACCCACAGATAACCAAGTCAGACTTCGTAAGAGAAAGGAAATAAGAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS CCA 72 bp TCTTGCACTCGGCGATCATATGGGCCAGCCCTTGAGTaGCAGCTAGGTTTTCATTCAAATCTTTCTGATCTG +
Preference number: 6 (lower is better)
Translates to: SCTRRSYGPALE*QLGFHSNLSDL
Trigger: CAGATCAGAAAGATTTGAATGAAAACCTAGCTGCCACTCAAGGGCTGGCCCATATGATCGCCGAGTGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
CDS CCA 72 bp CACAAGCTTCCTTGGCTTCAATTTGTGTTAGGATCATaGTGTCCGGCTTCTTTCTGCACATCAAGCACGGCA +
Preference number: 6 (lower is better)
Translates to: HKLPWLQFVLGS*CPASFCTSSTA
Trigger: TGCCGTGCTTGATGTGCAGAAAGAAGCCGGACACCATGATCCTAACACAAATTGAAGCCAAGGAAGCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358919.6
ENST00000515225.1
CDS CCA 72 bp AGGACCTTGCAGCTTTGCACTGTCAAACATGACCTGTaGTCTGTGCTGACTGTTGGTATCTCAGGTTTCTCT +
Preference number: 6 (lower is better)
Translates to: RTLQLCTVKHDL*SVLTVGISGFS
Trigger: AGAGAAACCTGAGATACCAACAGTCAGCACAGACCACAGGTCATGTTTGACAGTGCAAAGCTGCAAGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506171.1
CDS CCA 72 bp CAGCCTTGTACCACATGGCAGCATGCAGCAAAAGCATaGGCGCAAAGAATGAGCTATTCACTCAGGATTCAT +
Preference number: 6 (lower is better)
Translates to: QPCTTWQHAAKA*AQRMSYSLRIH
Trigger: ATGAATCCTGAGTGAATAGCTCATTCTTTGCGCCCATGCTTTTGCTGCATGCTGCCATGTGGTACAAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529018.1
CDS CAA 72 bp CAGTTAGGAGCGTCCTTCCACCTTGAACCTGGAGAATaGGGGTCTACAGTCTTAAGGAAGCTGATGGATTTC +
Preference number: 6 (lower is better)
Translates to: QLGASFHLEPGE*GSTVLRKLMDF
Trigger: GAAATCCATCAGCTTCCTTAAGACTGTAGACCCCAATTCTCCAGGTTCAAGGTGGAAGGACGCTCCTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513883.5
CDS CAA 72 bp TGCTTCATTAGCTATCATAGTGCATACCTCTCAGCCTaGTACCACATGGCAGCATGCAGCAAAAGCATGGGC +
Preference number: 6 (lower is better)
Translates to: CFISYHSAYLSA*YHMAACSKSMG
Trigger: GCCCATGCTTTTGCTGCATGCTGCCATGTGGTACAAGGCTGAGAGGTATGCACTATGATAGCTAATGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529018.1
CDS CAA 90 bp GGAACAGGAAATCTTCATAAAGCTGTGCATACTGGGGGAAACCAGTaGCCCGTAGCCAATCACAAGCTTCCTTGGCTTCAATTTCAGCCT +
Preference number: 6 (lower is better)
Translates to: GTGNLHKAVHTGGNQ*PVANHKLPWLQFQP
Trigger: AGGCTGAAATTGAAGCCAAGGAAGCTTGTGATTGGCTACGGGCAACTGGTTTCCCCCAGTATGCACAGCTTTATGAAGATTTCCTGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276297.9
CDS CAA 90 bp GGAACAGGAAATCTTCATAAAGCTGTGCATACTGGGGGAAACCAGTaGCCCGTAGCCAATCACAAGCTTCCTTGGCTTCAATTTCTGGGT +
Preference number: 6 (lower is better)
Translates to: GTGNLHKAVHTGGNQ*PVANHKLPWLQFLG
Trigger: ACCCAGAAATTGAAGCCAAGGAAGCTTGTGATTGGCTACGGGCAACTGGTTTCCCCCAGTATGCACAGCTTTATGAAGATTTCCTGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503161.6
ENST00000509922.5
CDS CAA 90 bp GGAACAGGAAATCTTCATAAAGCTGTGCATACTGGGGGAAACCAGTaGCCCGTAGCCAATCACAAGCTTCCTTGGCTTCAATTTCTGCCA +
Preference number: 6 (lower is better)
Translates to: GTGNLHKAVHTGGNQ*PVANHKLPWLQFLP
Trigger: TGGCAGAAATTGAAGCCAAGGAAGCTTGTGATTGGCTACGGGCAACTGGTTTCCCCCAGTATGCACAGCTTTATGAAGATTTCCTGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512044.6
CDS CAA 90 bp GAAACTGATCTTCACCTTCATGGCTGTCATTTTCGTCCACATCCTTaGAAAGATGACCCATTGGCCTCCCAGGAAAATCTCTCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: ETDLHLHGCHFRPHP*KDDPLASQENLSAL
Trigger: CAGAGCTGAGAGATTTTCCTGGGAGGCCAATGGGTCATCTTTCAAAGGATGTGGACGAAAATGACAGCCATGAAGGTGAAGATCAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
ENST00000631382.1
CDS CAA 90 bp GGAACAGGAAATCTTCATAAAGCTGTGCATACTGGGGGAAACCAGTaGCCCGTAGCCAATCACAAGCTTCCTTGGCTTCAATTTCTTGTG +
Preference number: 6 (lower is better)
Translates to: GTGNLHKAVHTGGNQ*PVANHKLPWLQFLV
Trigger: CACAAGAAATTGAAGCCAAGGAAGCTTGTGATTGGCTACGGGCAACTGGTTTCCCCCAGTATGCACAGCTTTATGAAGATTTCCTGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520226.5
CDS TCA 72 bp AACACCATGGTGGTGGAAGCGGTTGCGTTGCTTCAGTaGTCACCTAGATTTGGTGTCTTTGGTTTCAGTGTT +
Preference number: 6 (lower is better)
Translates to: NTMVVEAVALLQ*SPRFGVFGFSV
Trigger: AACACTGAAACCAAAGACACCAAATCTAGGTGATCACTGAAGCAACGCAACCGCTTCCACCACCATGGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
CDS CCA 72 bp GTCAACTCTGCACATGTAGGTGAGTTTGGATTTTCCTaGCCCACAGGGTTCAATCAAATACCTGGACAAGAG +
Preference number: 6 (lower is better)
Translates to: VNSAHVGEFGFS*PTGFNQIPGQE
Trigger: CTCTTGTCCAGGTATTTGATTGAACCCTGTGGGCCAGGAAAATCCAAACTCACCTACATGTGCAGAGTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
ENST00000521730.1
CDS CCA 72 bp GGAAACCAGTTGCCCGTAGCCAATCACAAGCTTCCTTaGCTTCAATTTCTTGTGTTGTTTCACTGTTGCGTG +
Preference number: 6 (lower is better)
Translates to: GNQLPVANHKLP*LQFLVLFHCCV
Trigger: CACGCAACAGTGAAACAACACAAGAAATTGAAGCCAAGGAAGCTTGTGATTGGCTACGGGCAACTGGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520226.5
CDS CCA 72 bp AACTGGTTTCATGTTCCAATGGGCAGTTTCAGCAGCTaGGCTTGTGGAAGATTTAATTCTTGGAGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: NWFHVPMGSFSS*ACGRFNSWSRC
Trigger: GCACCTGCTCCAAGAATTAAATCTTCCACAAGCCCAGCTGCTGAAACTGCCCATTGGAACATGAAACCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529018.1
CDS CAA 72 bp CTTCACCTTCATGGCTGTCATTTTCGTCCACATCCTTaGAAAGATGACCCATTGGCCTCCCAGGAAAATCTC +
Preference number: 6 (lower is better)
Translates to: LHLHGCHFRPHP*KDDPLASQENL
Trigger: GAGATTTTCCTGGGAGGCCAATGGGTCATCTTTCAAAGGATGTGGACGAAAATGACAGCCATGAAGGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
ENST00000631382.1
CDS CAA 72 bp GCCTCTTCTGGGGAAAGGTGTAAGGAGACAAACCAATaGCCACTTCCGAGTTGGAAAAATTGGATCCCTTTG +
Preference number: 6 (lower is better)
Translates to: ASSGERCKETNQ*PLPSWKNWIPL
Trigger: CAAAGGGATCCAATTTTTCCAACTCGGAAGTGGCAATTGGTTTGTCTCCTTACACCTTTCCCCAGAAGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316609.9
ENST00000506171.1
CDS CAA 72 bp TTTAGGAAAGTTTCCCTTTTAGCTTTCGGGACCCTGTaGACAGGCTTTGGAGCCCACTCTCCTATTTGCTTG +
Preference number: 6 (lower is better)
Translates to: FRKVSLLAFGTL*TGFGAHSPICL
Trigger: CAAGCAAATAGGAGAGTGGGCTCCAAAGCCTGTCAACAGGGTCCCGAAAGCTAAAAGGGAAACTTTCCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506171.1
CDS CAA 90 bp TGGAAGCGGTTGCGTTGCTTCAGTGATCACCTAGATTTGGTGTCTTaGGTTTCAGTGTTCTGGTTACTGAAGGAATCCCGGATCTTTACA +
Preference number: 6 (lower is better)
Translates to: WKRLRCFSDHLDLVS*VSVFWLLKESRIFT
Trigger: TGTAAAGATCCGGGATTCCTTCAGTAACCAGAACACTGAAACCAAAGACACCAAATCTAGGTGATCACTGAAGCAACGCAACCGCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
CDS CAA 90 bp GGAACAGGAAATCTTCATAAAGCTGTGCATACTGGGGGAAACCAGTaGCCCGTAGCCAATCACAAGCTTCCTTGGCTTCAATTTGTGTTA +
Preference number: 6 (lower is better)
Translates to: GTGNLHKAVHTGGNQ*PVANHKLPWLQFVL
Trigger: TAACACAAATTGAAGCCAAGGAAGCTTGTGATTGGCTACGGGCAACTGGTTTCCCCCAGTATGCACAGCTTTATGAAGATTTCCTGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358919.6
ENST00000515225.1
CDS CAA 90 bp CCTGTGGTCTGTGCTGACTGTTGGTATCTCAGGTTTCTCTTATCATaGGTGAAACTGGCATATTGTCACATCTTACTGAAGAGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: PVVCADCWYLRFLLS*VKLAYCHILLKSCP
Trigger: GGGACAGCTCTTCAGTAAGATGTGACAATATGCCAGTTTCACCAATGATAAGAGAAACCTGAGATACCAACAGTCAGCACAGACCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506171.1
CDS CAA 90 bp AGTGCTGGAGCAGAAGACAGGCTCCATCTTGATCGTATTAGAGTCTaGCTGACATTAAACACTTACAACTGCTTCCATCTAGCATGGCAG +
Preference number: 6 (lower is better)
Translates to: SAGAEDRLHLDRIRV*LTLNTYNCFHLAWQ
Trigger: CTGCCATGCTAGATGGAAGCAGTTGTAAGTGTTTAATGTCAGCAAGACTCTAATACGATCAAGATGGAGCCTGTCTTCTGCTCCAGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517333.1
CDS TCA 72 bp TTCACCTTCATGGCTGTCATTTTCGTCCACATCCTTTaGAAGATGACCCATTGGCCTCCCAGGAAAATCTCT +
Preference number: 6 (lower is better)
Translates to: FTFMAVIFVHIL*KMTHWPPRKIS
Trigger: AGAGATTTTCCTGGGAGGCCAATGGGTCATCTTTCAAAGGATGTGGACGAAAATGACAGCCATGAAGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
ENST00000631382.1
CDS TCA 72 bp CTTTGTGCTCTTATCTTCATCCACTTCCAACTTTACTaGTTTTACCGCTGCTGCCAGCCGTCTGTCTCTAGT +
Preference number: 6 (lower is better)
Translates to: LCALIFIHFQLY*FYRCCQPSVSS
Trigger: ACTAGAGACAGACGGCTGGCAGCAGCGGTAAAATCAGTAAAGTTGGAAGTGGATGAAGATAAGAGCACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506171.1
CDS GCA 72 bp CCTCTTCTGGGGAAAGGTGTAAGGAGACAAACCAATTaGCACTTCCGAGTTGGAAAAATTGGATCCCTTTGT +
Preference number: 6 (lower is better)
Translates to: PLLGKGVRRQTN*HFRVGKIGSLC
Trigger: ACAAAGGGATCCAATTTTTCCAACTCGGAAGTGGCAATTGGTTTGTCTCCTTACACCTTTCCCCAGAAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316609.9
ENST00000506171.1
CDS CAA 72 bp TTGCGTTGCTTCAGTGATCACCTAGATTTGGTGTCTTaGGTTTCAGTGTTCTGGTTACTGAAGGAATCCCGG +
Preference number: 6 (lower is better)
Translates to: LRCFSDHLDLVS*VSVFWLLKESR
Trigger: CCGGGATTCCTTCAGTAACCAGAACACTGAAACCAAAGACACCAAATCTAGGTGATCACTGAAGCAACGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
CDS CAA 72 bp TGGAAGCGGTTGCGTTGCTTCAGTGATCACCTAGATTaGGTGTCTTTGGTTTCAGTGTTCTGGTTACTGAAG +
Preference number: 6 (lower is better)
Translates to: WKRLRCFSDHLD*VSLVSVFWLLK
Trigger: CTTCAGTAACCAGAACACTGAAACCAAAGACACCAAATCTAGGTGATCACTGAAGCAACGCAACCGCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
CDS CAA 90 bp ACTTCTCTTTGCGGTCCACATTTAGAGTTGCATCTTTTTCCATACTaGCCTGCAAGCTGTCAGCTACTAGTCCATGATGACATGCTGTGT +
Preference number: 6 (lower is better)
Translates to: TSLCGPHLELHLFPY*PASCQLLVHDDMLC
Trigger: ACACAGCATGTCATCATGGACTAGTAGCTGACAGCTTGCAGGCAAGTATGGAAAAAGATGCAACTCTAAATGTGGACCGCAAAGAGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
ENST00000517333.1
ENST00000631382.1
CDS CAA 90 bp AGTCAGGTAGTGAAACACACTTCTCTTTGCGGTCCACATTTAGAGTaGCATCTTTTTCCATACTTGCCTGCAAGCTGTCAGCTACTAGTC +
Preference number: 6 (lower is better)
Translates to: SQVVKHTSLCGPHLE*HLFPYLPASCQLLV
Trigger: GACTAGTAGCTGACAGCTTGCAGGCAAGTATGGAAAAAGATGCAACTCTAAATGTGGACCGCAAAGAGAAGTGTGTTTCACTACCTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
ENST00000517333.1
ENST00000631382.1
CDS TCA 72 bp ACTAGTGTTTCTGTGCTGGCTTCCAGAGAAAGAAACTaGTCTTCACCTTCATGGCTGTCATTTTCGTCCACA +
Preference number: 6 (lower is better)
Translates to: TSVSVLASRERN*SSPSWLSFSST
Trigger: TGTGGACGAAAATGACAGCCATGAAGGTGAAGATCAGTTTCTTTCTCTGGAAGCCAGCACAGAAACACTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
ENST00000631382.1
CDS TCA 72 bp AGCTTTGCACTGTCAAACATGACCTGTGGTCTGTGCTaGCTGTTGGTATCTCAGGTTTCTCTTATCATTGGT +
Preference number: 6 (lower is better)
Translates to: SFALSNMTCGLC*LLVSQVSLIIG
Trigger: ACCAATGATAAGAGAAACCTGAGATACCAACAGTCAGCACAGACCACAGGTCATGTTTGACAGTGCAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506171.1
CDS TCA 72 bp ACACAATGGGAGCCAACTCCAGAGCTCAACAGTGAATaGCCTGAAGTCAAAATAAAATCTGCTGCTGATGAC +
Preference number: 6 (lower is better)
Translates to: TQWEPTPELNSE*PEVKIKSAADD
Trigger: GTCATCAGCAGCAGATTTTATTTTGACTTCAGGTCATTCACTGTTGAGCTCTGGAGTTGGCTCCCATTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510318.5
ENST00000513883.5
CDS CAA 72 bp GTGAAACACACTTCTCTTTGCGGTCCACATTTAGAGTaGCATCTTTTTCCATACTTGCCTGCAAGCTGTCAG +
Preference number: 6 (lower is better)
Translates to: VKHTSLCGPHLE*HLFPYLPASCQ
Trigger: CTGACAGCTTGCAGGCAAGTATGGAAAAAGATGCAACTCTAAATGTGGACCGCAAAGAGAAGTGTGTTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
ENST00000517333.1
ENST00000631382.1
CDS CAA 72 bp GGAGACAAACCAATTGCCACTTCCGAGTTGGAAAAATaGGATCCCTTTGTGCTCTTATCTTCATCCACTTCC +
Preference number: 6 (lower is better)
Translates to: GDKPIATSELEK*DPFVLLSSSTS
Trigger: GGAAGTGGATGAAGATAAGAGCACAAAGGGATCCAATTTTTCCAACTCGGAAGTGGCAATTGGTTTGTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316609.9
ENST00000506171.1
CDS CCA 72 bp GAGACAAACCAATTGCCACTTCCGAGTTGGAAAAATTaGATCCCTTTGTGCTCTTATCTTCATCCACTTCCA +
Preference number: 6 (lower is better)
Translates to: ETNQLPLPSWKN*IPLCSYLHPLP
Trigger: TGGAAGTGGATGAAGATAAGAGCACAAAGGGATCCAATTTTTCCAACTCGGAAGTGGCAATTGGTTTGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316609.9
ENST00000506171.1
CDS CCA 72 bp AGTAGCTATGAGAGAAAAACTGGTTTCATGTTCCAATaGGCAGTTTCAGCAGCTGGGCTTGTGGAAGATTTA +
Preference number: 6 (lower is better)
Translates to: SSYERKTGFMFQ*AVSAAGLVEDL
Trigger: TAAATCTTCCACAAGCCCAGCTGCTGAAACTGCCCATTGGAACATGAAACCAGTTTTTCTCTCATAGCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529018.1
CDS CAA 90 bp GTCAGGTTTCCTTCGTTGCTGAGCAATTACAGCAGAGTTAAGCAATaGTTTCTCAGGTGCAATATCTTTCACGTTCAAAGTATCCACTGC +
Preference number: 6 (lower is better)
Translates to: VRFPSLLSNYSRVKQ*FLRCNIFHVQSIHC
Trigger: GCAGTGGATACTTTGAACGTGAAAGATATTGCACCTGAGAAACAATTGCTTAACTCTGCTGTAATTGCTCAGCAACGAAGGAAACCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS CAA 90 bp TATTCACTCAGGATTCATAATCTAGCTCTGTTTCAGCCTCCTGGGTaGACAGCTTTCAAGTTAAGCATGGAAGGCTCTAAAGAAACAGTC +
Preference number: 6 (lower is better)
Translates to: YSLRIHNLALFQPPG*TAFKLSMEGSKETV
Trigger: GACTGTTTCTTTAGAGCCTTCCATGCTTAACTTGAAAGCTGTCAACCCAGGAGGCTGAAACAGAGCTAGATTATGAATCCTGAGTGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529018.1
CDS TCA 72 bp TTAGTTTCTCCAAAATCTAAGTTCCCATTTCGTGGTTaGGATCATGGCTCTATTCTGAGCAGTTTCACGCAG +
Preference number: 6 (lower is better)
Translates to: LVSPKSKFPFRG*DHGSILSSFTQ
Trigger: CTGCGTGAAACTGCTCAGAATAGAGCCATGATCTCAACCACGAAATGGGAACTTAGATTTTGGAGAAACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS GCA 72 bp ATCACTTTTGAATCCAACAGGTCTACATCCCAGAGGTaGTGTTCTTTAAGTAGGCGCTTTAAGATTTCCTCT +
Preference number: 6 (lower is better)
Translates to: ITFESNRSTSQR*CSLSRRFKISS
Trigger: AGAGGAAATCTTAAAGCGCCTACTTAAAGAACAGCACCTCTGGGATGTAGACCTGTTGGATTCAAAAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
ENST00000521730.1
CDS CCA 72 bp AGGTGTAAGGAGACAAACCAATTGCCACTTCCGAGTTaGAAAAATTGGATCCCTTTGTGCTCTTATCTTCAT +
Preference number: 6 (lower is better)
Translates to: RCKETNQLPLPS*KNWIPLCSYLH
Trigger: ATGAAGATAAGAGCACAAAGGGATCCAATTTTTCCAACTCGGAAGTGGCAATTGGTTTGTCTCCTTACACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316609.9
ENST00000506171.1
CDS CCA 72 bp CATGATTATAAGTTTCCTGAGGCCTCCCCAGCCAGGTaGAACTGTGAGTCAATTAAACTTCTTTCCTTTAAA +
Preference number: 6 (lower is better)
Translates to: HDYKFPEASPAR*NCESIKLLSFK
Trigger: TTTAAAGGAAAGAAGTTTAATTGACTCACAGTTCCACCTGGCTGGGGAGGCCTCAGGAAACTTATAATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529018.1
CDS CAA 72 bp AAATTTCAGTTTGGCTGTCCAGAATTTCGATCACTTTaGAATCCAACAGGTCTACATCCCAGAGGTGCTGTT +
Preference number: 6 (lower is better)
Translates to: KFQFGCPEFRSL*NPTGLHPRGAV
Trigger: AACAGCACCTCTGGGATGTAGACCTGTTGGATTCAAAAGTGATCGAAATTCTGGACAGCCAAACTGAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276297.9
ENST00000358919.6
ENST00000510318.5
ENST00000512044.6
ENST00000520226.5
ENST00000521730.1
CDS CAA 72 bp GCAGAAGACAGGCTCCATCTTGATCGTATTAGAGTCTaGCTGACATTAAACACTTACAACTGCTTCCATCTA +
Preference number: 6 (lower is better)
Translates to: AEDRLHLDRIRV*LTLNTYNCFHL
Trigger: TAGATGGAAGCAGTTGTAAGTGTTTAATGTCAGCAAGACTCTAATACGATCAAGATGGAGCCTGTCTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517333.1
CDS GCA 72 bp TTGCCACTTCCGAGTTGGAAAAATTGGATCCCTTTGTaGTCTTATCTTCATCCACTTCCAACTTTACTGATT +
Preference number: 6 (lower is better)
Translates to: LPLPSWKNWIPL*SYLHPLPTLLI
Trigger: AATCAGTAAAGTTGGAAGTGGATGAAGATAAGAGCACAAAGGGATCCAATTTTTCCAACTCGGAAGTGGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316609.9
ENST00000506171.1
CDS GCA 72 bp CTTCCTTGGCTTCAATTTCTTGTGTTGTTTCACTGTTaGGTGATCAGGTACTCATCAGGTATTAATCCAGTA +
Preference number: 6 (lower is better)
Translates to: LPWLQFLVLFHC*VIRYSSGINPV
Trigger: TACTGGATTAATACCTGATGAGTACCTGATCACGCAACAGTGAAACAACACAAGAAATTGAAGCCAAGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520226.5
CDS GCA 72 bp GATTTAATTCTTGGAGCAGGTGCTATATGTCTTGAGTaGTTTCTCCCTGGTTCTTCTATTCTGTTTTACCTG +
Preference number: 6 (lower is better)
Translates to: DLILGAGAICLE*FLPGSSILFYL
Trigger: CAGGTAAAACAGAATAGAAGAACCAGGGAGAAAGCACTCAAGACATATAGCACCTGCTCCAAGAATTAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529018.1
CDS TCA 72 bp CCTTTAATTGTAAACACTGCATGCCATCTTCTGCCTTaGCCTTTGGTGGACTTTTGTTTTGATGTTGTGAAA +
Preference number: 6 (lower is better)
Translates to: PLIVNTACHLLP*PLVDFCFDVVK
Trigger: TTTCACAACATCAAAACAAAAGTCCACCAAAGGTCAAGGCAGAAGATGGCATGCAGTGTTTACAATTAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
ENST00000517868.2
CDS TCA 72 bp ACACATATTAGTAAAGGGTCTAACAACTTTGGTGCATaGAATTTAGCTACAGAAAGGACAAGCAACTGCCTC +
Preference number: 6 (lower is better)
Translates to: THISKGSNNFGA*NLATERTSNCL
Trigger: GAGGCAGTTGCTTGTCCTTTCTGTAGCTAAATTTCATGCACCAAAGTTGTTAGACCCTTTACTAATATGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529018.1
CDS TCA 72 bp GGAAGATTTAATTCTTGGAGCAGGTGCTATATGTCTTaGGTGCTTTCTCCCTGGTTCTTCTATTCTGTTTTA +
Preference number: 6 (lower is better)
Translates to: GRFNSWSRCYMS*VLSPWFFYSVL
Trigger: TAAAACAGAATAGAAGAACCAGGGAGAAAGCACTCAAGACATATAGCACCTGCTCCAAGAATTAAATCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529018.1
CDS GCA 72 bp AGCAATTACAGCAGAGTTAAGCAATTGTTTCTCAGGTaGAATATCTTTCACGTTCAAAGTATCCACTGCATT +
Preference number: 6 (lower is better)
Translates to: SNYSRVKQLFLR*NIFHVQSIHCI
Trigger: AATGCAGTGGATACTTTGAACGTGAAAGATATTGCACCTGAGAAACAATTGCTTAACTCTGCTGTAATTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1
CDS CAA 90 bp TCAGGTGCAATATCTTTCACGTTCAAAGTATCCACTGCATTTACTTaGGGTGCATCTTTTATTTCACTTAAGCTTATTTCATTGCAAAGC +
Preference number: 6 (lower is better)
Translates to: SGAISFTFKVSTAFT*GASFISLKLISLQS
Trigger: GCTTTGCAATGAAATAAGCTTAAGTGAAATAAAAGATGCACCCAAAGTAAATGCAGTGGATACTTTGAACGTGAAAGATATTGCACCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276297.9
ENST00000316609.9
ENST00000511869.1