Pregenerated sensors for DKKL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000104901Ensembl transcript IDs: ENST00000594268.1, ENST00000596402.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GAGCGTTGGTTGCGCTCCGCGAGCCGTAGCCACGCCCCTATTGTCTaGCCACGCTCCAAACTTGCCGGCCTCACCCAGGAGCCCGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ERWLRSASRSHAPIV*PRSKLAGLTQEPGP Trigger: AGGCCCGGGCTCCTGGGTGAGGCCGGCAAGTTTGGAGCGTGGTCAGACAATAGGGGCGTGGCTACGGCTCGCGGAGCGCAACCAACGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596402.1 |
||
| CDS CCA 90 bp | CTCCATCCTGGGTACCCGGCTCCACCGTCCCTTTGTCTGGCCACATaGGGAAGGGCTGGGCTGGGATTTTGGCCTACGGGGGTCCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LHPGYPAPPSLCLAT*GRAGLGFWPTGVLN Trigger: GTTCAGGACCCCCGTAGGCCAAAATCCCAGCCCAGCCCTTCCCCATGTGGCCAGACAAAGGGACGGTGGAGCCGGGTACCCAGGATGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594268.1 |
||
| CDS CAA 90 bp | ACCGTCCCTTTGTCTGGCCACATGGGGAAGGGCTGGGCTGGGATTTaGGCCTACGGGGGTCCTGAACGCCGCAGCGCCACTGGGCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TVPLSGHMGKGWAGI*AYGGPERRSATGLG Trigger: GCCAAGCCCAGTGGCGCTGCGGCGTTCAGGACCCCCGTAGGCCAAAATCCCAGCCCAGCCCTTCCCCATGTGGCCAGACAAAGGGACGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594268.1 |
||
| CDS CAA 90 bp | CCGCGAGCCGTAGCCACGCCCCTATTGTCTGACCACGCTCCAAACTaGCCGGCCTCACCCAGGAGCCCGGGCCTCTACTCCATGACCACG | + |
|
Preference number: 6 (lower is better) Translates to: PRAVATPLLSDHAPN*PASPRSPGLYSMTT Trigger: CGTGGTCATGGAGTAGAGGCCCGGGCTCCTGGGTGAGGCCGGCAAGTTTGGAGCGTGGTCAGACAATAGGGGCGTGGCTACGGCTCGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596402.1 |
||
| CDS CCA 72 bp | GGGTACCCGGCTCCACCGTCCCTTTGTCTGGCCACATaGGGAAGGGCTGGGCTGGGATTTTGGCCTACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GYPAPPSLCLAT*GRAGLGFWPTG Trigger: CCCCGTAGGCCAAAATCCCAGCCCAGCCCTTCCCCATGTGGCCAGACAAAGGGACGGTGGAGCCGGGTACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594268.1 |
||
| CDS TCA 72 bp | TTGCGCTCCGCGAGCCGTAGCCACGCCCCTATTGTCTaGCCACGCTCCAAACTTGCCGGCCTCACCCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LRSASRSHAPIV*PRSKLAGLTQE Trigger: CTCCTGGGTGAGGCCGGCAAGTTTGGAGCGTGGTCAGACAATAGGGGCGTGGCTACGGCTCGCGGAGCGCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596402.1 |
||
| CDS CAA 72 bp | GTAGCCACGCCCCTATTGTCTGACCACGCTCCAAACTaGCCGGCCTCACCCAGGAGCCCGGGCCTCTACTCC | + |
|
Preference number: 6 (lower is better) Translates to: VATPLLSDHAPN*PASPRSPGLYS Trigger: GGAGTAGAGGCCCGGGCTCCTGGGTGAGGCCGGCAAGTTTGGAGCGTGGTCAGACAATAGGGGCGTGGCTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596402.1 |
||
| CDS CAA 72 bp | GTTGGTTGCGCTCCGCGAGCCGTAGCCACGCCCCTATaGTCTGACCACGCTCCAAACTTGCCGGCCTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: VGCAPRAVATPL*SDHAPNLPASP Trigger: GGGTGAGGCCGGCAAGTTTGGAGCGTGGTCAGACAATAGGGGCGTGGCTACGGCTCGCGGAGCGCAACCAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596402.1 |
||
| CDS CCA 72 bp | TCCATCCTGGGTACCCGGCTCCACCGTCCCTTTGTCTaGCCACATGGGGAAGGGCTGGGCTGGGATTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SILGTRLHRPFV*PHGEGLGWDFG Trigger: GCCAAAATCCCAGCCCAGCCCTTCCCCATGTGGCCAGACAAAGGGACGGTGGAGCCGGGTACCCAGGATGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594268.1 |
||
| CDS CAA 72 bp | TATGGTCTCGAGCCCAGGTCTGGTCTAGAGCGTTGGTaGCGCTCCGCGAGCCGTAGCCACGCCCCTATTGTC | + |
|
Preference number: 6 (lower is better) Translates to: YGLEPRSGLERW*RSASRSHAPIV Trigger: GACAATAGGGGCGTGGCTACGGCTCGCGGAGCGCAACCAACGCTCTAGACCAGACCTGGGCTCGAGACCATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596402.1 |
||
| CDS CCA 72 bp | AGTTATGGTCTCGAGCCCAGGTCTGGTCTAGAGCGTTaGTTGCGCTCCGCGAGCCGTAGCCACGCCCCTATT | + |
|
Preference number: 6 (lower is better) Translates to: SYGLEPRSGLER*LRSASRSHAPI Trigger: AATAGGGGCGTGGCTACGGCTCGCGGAGCGCAACCAACGCTCTAGACCAGACCTGGGCTCGAGACCATAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596402.1 |
||
| CDS CCA 72 bp | GGGGGCAGGTGGGGAGGTGTTAAAGCCAAACAGTTATaGTCTCGAGCCCAGGTCTGGTCTAGAGCGTTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GGRWGGVKAKQL*SRAQVWSRALV Trigger: AACCAACGCTCTAGACCAGACCTGGGCTCGAGACCATAACTGTTTGGCTTTAACACCTCCCCACCTGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000596402.1 |
||