RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DKK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000050165

Ensembl transcript IDs: ENST00000326932.8, ENST00000396505.7, ENST00000525493.5, ENST00000525927.5, ENST00000526218.5, ENST00000527132.1, ENST00000528188.5, ENST00000529338.1, ENST00000530694.5, ENST00000531309.1, ENST00000532372.5, ENST00000532873.5, ENST00000533813.5, ENST00000533900.1, ENST00000534479.5, ENST00000534511.5, ENST00000683431.1

Found 661 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTCCAGCCACTGCAAATGACTTGCAGTTTCCCCTACATGGCACCTaGCCCTTGTGCCTCCCTCCCTCTGCCCATGGCCCAGAAAGCCCT +
Preference number: 1 (lower is better)
Translates to: LPATANDLQFPLHGT*PLCLPPSAHGPESP
Trigger: AGGGCTTTCTGGGCCATGGGCAGAGGGAGGGAGGCACAAGGGTCAGGTGCCATGTAGGGGAAACTGCAAGTCATTTGCAGTGGCTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 90 bp GTCATGGGGCCAGCCCTAGCTGCTGGAGGGACTGAGAACAGCTGTTaGGCAGTTTACCTGACGGCATCTGCCATGGCTTGGCAGGAACTC +
Preference number: 1 (lower is better)
Translates to: VMGPALAAGGTENSC*AVYLTASAMAWQEL
Trigger: GAGTTCCTGCCAAGCCATGGCAGATGCCGTCAGGTAAACTGCTCAACAGCTGTTCTCAGTCCCTCCAGCAGCTAGGGCTGGCCCCATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 90 bp GACTCTCCCCAGAGCCTCCAGAGGAATGCAGCCCTGTTGATCACATaGTCACCAGATGGCTGCCCCAGAGCCAAATGTCGCTTCCTGAGC +
Preference number: 1 (lower is better)
Translates to: DSPQSLQRNAALLIT*SPDGCPRAKCRFLS
Trigger: GCTCAGGAAGCGACATTTGGCTCTGGGGCAGCCATCTGGTGATCATGTGATCAACAGGGCTGCATTCCTCTGGAGGCTCTGGGGAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 90 bp AAAGCTCCCCTGAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTaGCAACTCCTGCACCAGCTTGACTGGTGGTGGAAGAGGCCAGGA +
Preference number: 1 (lower is better)
Translates to: KAPLNLHSASKMCCP*QLLHQLDWWWKRPG
Trigger: TCCTGGCCTCTTCCACCACCAGTCAAGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCAGGGGAGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 90 bp TTACATTTCCTGGGTCATGGGGCCAGCCCTAGCTGCTGGAGGGACTaGGAACAGCTGTTGAGCAGTTTACCTGACGGCATCTGCCATGGC +
Preference number: 1 (lower is better)
Translates to: LHFLGHGASPSCWRD*EQLLSSLPDGICHG
Trigger: GCCATGGCAGATGCCGTCAGGTAAACTGCTCAACAGCTGTTCTCAGTCCCTCCAGCAGCTAGGGCTGGCCCCATGACCCAGGAAATGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 90 bp GTCTCCCTCATTAGACTGGGATGCCTTCAAGGTAGGGACCCTATCTaGGTCAGCTTGGCACCCCAAAGCGTACCACAGCACCTGATTCTG +
Preference number: 1 (lower is better)
Translates to: VSLIRLGCLQGRDPI*VSLAPQSVPQHLIL
Trigger: CAGAATCAGGTGCTGTGGTACGCTTTGGGGTGCCAAGCTGACCCAGATAGGGTCCCTACCTTGAAGGCATCCCAGTCTAATGAGGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 90 bp GATGGTTCACTACCACTGGGTAGTGCCATTTTGGCCGGACATGGTTaGGGTAACCCAGTGACACCAGCACTGATTGGACTGCCCTACACC +
Preference number: 1 (lower is better)
Translates to: DGSLPLGSAILAGHG*GNPVTPALIGLPYT
Trigger: GGTGTAGGGCAGTCCAATCAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCCAGTGGTAGTGAACCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 90 bp GAGGCAAAGCAGCCAATAATCTGGACAGGGGTGGCAAACTGCTCCTaGAGTTTAACCCTGCCTGACTCTCCCAAGCACCAGACTGTGAAG +
Preference number: 1 (lower is better)
Translates to: EAKQPIIWTGVANCS*SLTLPDSPKHQTVK
Trigger: CTTCACAGTCTGGTGCTTGGGAGAGTCAGGCAGGGTTAAACTGCAGGAGCAGTTTGCCACCCCTGTCCAGATTATTGGCTGCTTTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR GCA 90 bp CTGGTAGAGGCAAAGCAGCCAATAATCTGGACAGGGGTGGCAAACTaGTCCTGCAGTTTAACCCTGCCTGACTCTCCCAAGCACCAGACT +
Preference number: 1 (lower is better)
Translates to: LVEAKQPIIWTGVAN*SCSLTLPDSPKHQT
Trigger: AGTCTGGTGCTTGGGAGAGTCAGGCAGGGTTAAACTGCAGGAGCAGTTTGCCACCCCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR GCA 90 bp GTTTCATTCAAAGCTCCCCTGAACCTCCATAGTGCCTCCAAGATGTaGTGTCCCTGCCAACTCCTGCACCAGCTTGACTGGTGGTGGAAG +
Preference number: 1 (lower is better)
Translates to: VSFKAPLNLHSASKM*CPCQLLHQLDWWWK
Trigger: CTTCCACCACCAGTCAAGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCAGGGGAGCTTTGAATGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 90 bp CAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTaGACAGGGGTGGCAAACTGCTCCTGCAGTTTAACCCTGCCTGAC +
Preference number: 1 (lower is better)
Translates to: QTAVCQLVEAKQPII*TGVANCSCSLTLPD
Trigger: GTCAGGCAGGGTTAAACTGCAGGAGCAGTTTGCCACCCCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR CCA 90 bp TCCCTCCCTCTGCCCATGGCCCAGAAAGCCCTTTCCTGTGCCCTCTaGCTTCCTGATAAACTCCTATCATCTTCAAGAGCCAGTTCCCAT +
Preference number: 1 (lower is better)
Translates to: SLPLPMAQKALSCAL*LPDKLLSSSRASSH
Trigger: ATGGGAACTGGCTCTTGAAGATGATAGGAGTTTATCAGGAAGCCAGAGGGCACAGGAAAGGGCTTTCTGGGCCATGGGCAGAGGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 90 bp CCTTGGTCATCTTTATACAGGGCAATTGTGCTGCTGCTGCTGAGGTaGCCACTTTCAGCAAGCCCTGTGTGCAGGGGCCTAGCTGCATTT +
Preference number: 1 (lower is better)
Translates to: PWSSLYRAIVLLLLR*PLSASPVCRGLAAF
Trigger: AAATGCAGCTAGGCCCCTGCACACAGGGCTTGCTGAAAGTGGCCACCTCAGCAGCAGCAGCACAATTGCCCTGTATAAAGATGACCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 90 bp TTTGTCATTGCTTGCTCTGGCTGTGTCTCCCTCATTAGACTGGGATaGCTTCAAGGTAGGGACCCTATCTGGGTCAGCTTGGCACCCCAA +
Preference number: 1 (lower is better)
Translates to: FVIACSGCVSLIRLG*LQGRDPIWVSLAPQ
Trigger: TTGGGGTGCCAAGCTGACCCAGATAGGGTCCCTACCTTGAAGGCATCCCAGTCTAATGAGGGAGACACAGCCAGAGCAAGCAATGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 90 bp CCTCCCTCCCCACAGGCCCAGAGAACCAGTTGGGCTTTGTTCTCCTaGAGGCTATGGTTCATCATGCAAATAGCTCCTGTGTCAGAAATG +
Preference number: 1 (lower is better)
Translates to: PPSPQAQRTSWALFS*RLWFIMQIAPVSEM
Trigger: CATTTCTGACACAGGAGCTATTTGCATGATGAACCATAGCCTGCAGGAGAACAAAGCCCAACTGGTTCTCTGGGCCTGTGGGGAGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 90 bp GGATTATCTAGGTGGGCGCAATTTGATCACATGGGTCCCCAGAAGTaGAGAACCTTTCCCACCTGTAGAAAGCCAGAGAGCTGGCACCTG +
Preference number: 1 (lower is better)
Translates to: GLSRWAQFDHMGPQK*RTFPTCRKPESWHL
Trigger: CAGGTGCCAGCTCTCTGGCTTTCTACAGGTGGGAAAGGTTCTCCACTTCTGGGGACCCATGTGATCAAATTGCGCCCACCTAGATAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 90 bp CAAAGGACCCAACTCCTAACAGCATTGGTGCTCCCTCATGAAATTTaGCAGTGTCTTGCCAGCCTCCTGCTGGCAGACACTTCTCTGCAG +
Preference number: 1 (lower is better)
Translates to: QRTQLLTALVLPHEI*QCLASLLLADTSLQ
Trigger: CTGCAGAGAAGTGTCTGCCAGCAGGAGGCTGGCAAGACACTGTCAAATTTCATGAGGGAGCACCAATGCTGTTAGGAGTTGGGTCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 90 bp CCTGGAGAACAGCCTGGGGGAGCTGAACAAATGCACAACACCTCATaGTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGA +
Preference number: 1 (lower is better)
Translates to: PGEQPGGAEQMHNTS*CQARGETYWEEDVG
Trigger: TCCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGTGTTGTGCATTTGTTCAGCTCCCCCAGGCTGTTCTCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR GCA 90 bp GTGTCAGCTCACCAGGTCAGAAATTGTTATTGGACCCTAAAACCTTaGCTCACAGGTGGGCACCAAGCTCCCCTTCCCTCTGCTTTCCAT +
Preference number: 1 (lower is better)
Translates to: VSAHQVRNCYWTLKP*LTGGHQAPLPSAFH
Trigger: ATGGAAAGCAGAGGGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGTTTTAGGGTCCAATAACAATTTCTGACCTGGTGAGCTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 90 bp CCAGGTCAGAAATTGTTATTGGACCCTAAAACCTTGCCTCACAGGTaGGCACCAAGCTCCCCTTCCCTCTGCTTTCCATGTTTCCCACCT +
Preference number: 1 (lower is better)
Translates to: PGQKLLLDPKTLPHR*APSSPSLCFPCFPP
Trigger: AGGTGGGAAACATGGAAAGCAGAGGGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGTTTTAGGGTCCAATAACAATTTCTGACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 90 bp CTATCAGCAAAGGACCCAACTCCTAACAGCATTGGTGCTCCCTCATaGAATTTGACAGTGTCTTGCCAGCCTCCTGCTGGCAGACACTTC +
Preference number: 1 (lower is better)
Translates to: LSAKDPTPNSIGAPS*NLTVSCQPPAGRHF
Trigger: GAAGTGTCTGCCAGCAGGAGGCTGGCAAGACACTGTCAAATTTCATGAGGGAGCACCAATGCTGTTAGGAGTTGGGTCCTTTGCTGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 90 bp TTTTACCGTGGGGCAGATGAACTTGTGTCAACCATGCACACCCTGTaGGAACCAAGTACCTGTGTTTCTAAGGCGGGCACTCAAGGTGAG +
Preference number: 1 (lower is better)
Translates to: FYRGADELVSTMHTL*EPSTCVSKAGTQGE
Trigger: CTCACCTTGAGTGCCCGCCTTAGAAACACAGGTACTTGGTTCTCACAGGGTGTGCATGGTTGACACAAGTTCATCTGCCCCACGGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 90 bp GAACCAAGTACCTGTGTTTCTAAGGCGGGCACTCAAGGTGAGGGGTaGATTCTGGCCAAAGAAACAAAAGCTGTGGTTTCAGGACCATGC +
Preference number: 1 (lower is better)
Translates to: EPSTCVSKAGTQGEG*ILAKETKAVVSGPC
Trigger: GCATGGTCCTGAAACCACAGCTTTTGTTTCTTTGGCCAGAATGCACCCCTCACCTTGAGTGCCCGCCTTAGAAACACAGGTACTTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 90 bp GACACCAGCACTGATTGGACTGCCCTACACCAATCAGAAGCTCAGTaGCCAATGGGCCACTGTTTTGACTCGGAATCATGTTGTGCACTA +
Preference number: 1 (lower is better)
Translates to: DTSTDWTALHQSEAQ*PMGHCFDSESCCAL
Trigger: TAGTGCACAACATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAGTCCAATCAGTGCTGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 90 bp CCCCAGAAGTGGAGAACCTTTCCCACCTGTAGAAAGCCAGAGAGCTaGCACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAAGATG +
Preference number: 1 (lower is better)
Translates to: PQKWRTFPTCRKPES*HLRRTELSLQDLKM
Trigger: CATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGGTGGGAAAGGTTCTCCACTTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 90 bp CCTCTGTTCCCACATCGGGTTGACTGTCTTTGTTTTGTCATTGCTTaGTCTGGCTGTGTCTCCCTCATTAGACTGGGATGCCTTCAAGGT +
Preference number: 1 (lower is better)
Translates to: PLFPHRVDCLCFVIA*SGCVSLIRLGCLQG
Trigger: ACCTTGAAGGCATCCCAGTCTAATGAGGGAGACACAGCCAGAGCAAGCAATGACAAAACAAAGACAGTCAACCCGATGTGGGAACAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 90 bp CCTGCTGGCAGACACTTCTCTGCAGTGAATACCACTATCCCATGCTaGACTAGTCCCTACCAAGTCTTCAACCCTCAATTTGATCTTCCA +
Preference number: 1 (lower is better)
Translates to: PAGRHFSAVNTTIPC*TSPYQVFNPQFDLP
Trigger: TGGAAGATCAAATTGAGGGTTGAAGACTTGGTAGGGACTAGTGCAGCATGGGATAGTGGTATTCACTGCAGAGAAGTGTCTGCCAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 90 bp CCTCCTGCTGGCAGACACTTCTCTGCAGTGAATACCACTATCCCATaGTGCACTAGTCCCTACCAAGTCTTCAACCCTCAATTTGATCTT +
Preference number: 1 (lower is better)
Translates to: PPAGRHFSAVNTTIP*CTSPYQVFNPQFDL
Trigger: AAGATCAAATTGAGGGTTGAAGACTTGGTAGGGACTAGTGCAGCATGGGATAGTGGTATTCACTGCAGAGAAGTGTCTGCCAGCAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 90 bp GGGAAGATTATTCTGGATTATCTAGGTGGGCGCAATTTGATCACATaGGTCCCCAGAAGTGGAGAACCTTTCCCACCTGTAGAAAGCCAG +
Preference number: 1 (lower is better)
Translates to: GKIILDYLGGRNLIT*VPRSGEPFPPVESQ
Trigger: CTGGCTTTCTACAGGTGGGAAAGGTTCTCCACTTCTGGGGACCCATGTGATCAAATTGCGCCCACCTAGATAATCCAGAATAATCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 90 bp GCACTGATTGGACTGCCCTACACCAATCAGAAGCTCAGTGCCCAATaGGCCACTGTTTTGACTCGGAATCATGTTGTGCACTATAGTCAA +
Preference number: 1 (lower is better)
Translates to: ALIGLPYTNQKLSAQ*ATVLTRNHVVHYSQ
Trigger: TTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAGTCCAATCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 90 bp AGACAATCTTATCTTAAAGTTCAGTGGTTTCATTCAAAGCTCCCCTaGACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTGCCAACTCC +
Preference number: 1 (lower is better)
Translates to: RQSYLKVQWFHSKLP*TSIVPPRCAVPANS
Trigger: GGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCAGGGGAGCTTTGAATGAAACCACTGAACTTTAAGATAAGATTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 90 bp AGGTTAAGGACCTTGACGTGGGAAGATTATTCTGGATTATCTAGGTaGGCGCAATTTGATCACATGGGTCCCCAGAAGTGGAGAACCTTT +
Preference number: 1 (lower is better)
Translates to: RLRTLTWEDYSGLSR*AQFDHMGPQKWRTF
Trigger: AAAGGTTCTCCACTTCTGGGGACCCATGTGATCAAATTGCGCCCACCTAGATAATCCAGAATAATCTTCCCACGTCAAGGTCCTTAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 90 bp TCCACCTCCTCACCAGCTCACCTGTACAAGAGAATTGATCTCAACTaGGTGTCAGCTCACCAGGTCAGAAATTGTTATTGGACCCTAAAA +
Preference number: 1 (lower is better)
Translates to: STSSPAHLYKRIDLN*VSAHQVRNCYWTLK
Trigger: TTTTAGGGTCCAATAACAATTTCTGACCTGGTGAGCTGACACTCAGTTGAGATCAATTCTCTTGTACAGGTGAGCTGGTGAGGAGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 90 bp TGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTaGCTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAAG +
Preference number: 1 (lower is better)
Translates to: CPTPIRSSVPNGPLF*LGIMLCTIVKCTVK
Trigger: CTTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 90 bp CACTCAGGACTGAGTAAAGGAGACACTCAGATGCTACTCAGATGCTaGCTTCAGCTAAGTATTTTGCAAAGCCTCTCGTGTTCTTACAAG +
Preference number: 1 (lower is better)
Translates to: HSGLSKGDTQMLLRC*LQLSILQSLSCSYK
Trigger: CTTGTAAGAACACGAGAGGCTTTGCAAAATACTTAGCTGAAGCCAGCATCTGAGTAGCATCTGAGTGTCTCCTTTACTCAGTCCTGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 90 bp ATCGGTGGTTTACTTAAGGTGTCCAGAGATGGTGGAGAACAGGATTaGTTTCCTCCTCAATGTCAAGGACTCAAAGACTCTTTCTGTGGT +
Preference number: 1 (lower is better)
Translates to: IGGLLKVSRDGGEQD*FPPQCQGLKDSFCG
Trigger: ACCACAGAAAGAGTCTTTGAGTCCTTGACATTGAGGAGGAAACCAATCCTGTTCTCCACCATCTCTGGACACCTTAAGTAAACCACCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 90 bp TTAAGAACTCTGGATGAATACATGGTGGCAACAGTCCATGACACCTaGAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGT +
Preference number: 1 (lower is better)
Translates to: LRTLDEYMVATVHDT*KHHLWSGVEFSVRS
Trigger: ACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTTCAGGTGTCATGGACTGTTGCCACCATGTATTCATCCAGAGTTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR TCA 90 bp TGCACTAGTCCCTACCAAGTCTTCAACCCTCAATTTGATCTTCCATaGGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGAAT +
Preference number: 1 (lower is better)
Translates to: CTSPYQVFNPQFDLP*VSQKVPLRSFSQGN
Trigger: ATTCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAAATTGAGGGTTGAAGACTTGGTAGGGACTAGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 90 bp TTTCACTCAGGACTGAGTAAAGGAGACACTCAGATGCTACTCAGATaGTGGCTTCAGCTAAGTATTTTGCAAAGCCTCTCGTGTTCTTAC +
Preference number: 1 (lower is better)
Translates to: FHSGLSKGDTQMLLR*WLQLSILQSLSCSY
Trigger: GTAAGAACACGAGAGGCTTTGCAAAATACTTAGCTGAAGCCAGCATCTGAGTAGCATCTGAGTGTCTCCTTTACTCAGTCCTGAGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 90 bp TACAGGCCTGCTTACTTGGGATGTAGGGTTAGTAAATGGGGTTTCTaGTTTAAAGGACTGACTTGCTATCACACAAAAGAGGCAGACTTG +
Preference number: 1 (lower is better)
Translates to: YRPAYLGCRVSKWGF*FKGLTCYHTKEADL
Trigger: CAAGTCTGCCTCTTTTGTGTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCCAAGTAAGCAGGCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 90 bp GGCACTTGCCACGCAGCTGACTTCAATATAGTAGCTCTAATATTATaGTCCTTGAGGATCTTACTGTCTTATGGCCCAGAACTGCATTTG +
Preference number: 1 (lower is better)
Translates to: GTCHAADFNIVALIL*SLRILLSYGPELHL
Trigger: CAAATGCAGTTCTGGGCCATAAGACAGTAAGATCCTCAAGGACCATAATATTAGAGCTACTATATTGAAGTCAGCTGCGTGGCAAGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 90 bp GTGTACATTGAGAAGTATAGCAATCTATGTAAATGTAATCCTCAGTaGGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTTG +
Preference number: 1 (lower is better)
Translates to: VYIEKYSNLCKCNPQ*GSSVLGPIGLSLPL
Trigger: CAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTTACATAGATTGCTATACTTCTCAATGTACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 90 bp AACATTTCATCTGCAACAGCTGAAGGCACAGCTTACCTATGCCCATaGAAAGAACTGCGTGGAAAATTCATTTGTTGCATTTTTGCCAGG +
Preference number: 1 (lower is better)
Translates to: NISSATAEGTAYLCP*KELRGKFICCIFAR
Trigger: CCTGGCAAAAATGCAACAAATGAATTTTCCACGCAGTTCTTTCCATGGGCATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAAATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR CCA 90 bp TTTTTCATAACTGTGCCAATTGTTTTGTCAAATGCAGTTACCCACTaGGCAGTGGGCTTATCAAGTGCTCAGTGCAATCCTGTGACTTTT +
Preference number: 1 (lower is better)
Translates to: FFITVPIVLSNAVTH*AVGLSSAQCNPVTF
Trigger: AAAAGTCACAGGATTGCACTGAGCACTTGATAAGCCCACTGCCCAGTGGGTAACTGCATTTGACAAAACAATTGGCACAGTTATGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 90 bp TCAAATGCAGTTACCCACTGGGCAGTGGGCTTATCAAGTGCTCAGTaGAATCCTGTGACTTTTAAGTCATTTTGCATTATTAAGACAATC +
Preference number: 1 (lower is better)
Translates to: SNAVTHWAVGLSSAQ*NPVTFKSFCIIKTI
Trigger: GATTGTCTTAATAATGCAAAATGACTTAAAAGTCACAGGATTGCACTGAGCACTTGATAAGCCCACTGCCCAGTGGGTAACTGCATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 90 bp GCAAAAGAGATTTTGCAGATGCAATTAAGGTTAAGGACCTTGACGTaGGAAGATTATTCTGGATTATCTAGGTGGGCGCAATTTGATCAC +
Preference number: 1 (lower is better)
Translates to: AKEILQMQLRLRTLT*EDYSGLSRWAQFDH
Trigger: GTGATCAAATTGCGCCCACCTAGATAATCCAGAATAATCTTCCCACGTCAAGGTCCTTAACCTTAATTGCATCTGCAAAATCTCTTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 90 bp CTTGACTTTCAGAAACAAGAATACTGCACAAACTCAAGCATGCATTaGAGCATGTGTTACTATTTAGAAAAGAGTGCAGCCATCAGTAGG +
Preference number: 1 (lower is better)
Translates to: LDFQKQEYCTNSSMH*SMCYYLEKSAAISR
Trigger: CCTACTGATGGCTGCACTCTTTTCTAAATAGTAACACATGCTCCAATGCATGCTTGAGTTTGTGCAGTATTCTTGTTTCTGAAAGTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 90 bp GTATTTTGCAAAGCCTCTCGTGTTCTTACAAGTTTGTGGCTATCATaGCAAAATGGAGCAGCCTACTATATCTACATATACAACTATGGG +
Preference number: 1 (lower is better)
Translates to: VFCKASRVLTSLWLS*QNGAAYYIYIYNYG
Trigger: CCCATAGTTGTATATGTAGATATAGTAGGCTGCTCCATTTTGTCATGATAGCCACAAACTTGTAAGAACACGAGAGGCTTTGCAAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 90 bp AGAGGCAGACTTGTAAACACAATGGGCTTTGGAGTTTGGTCTGATTaGGTTTGGTTTAGTATTCCTATGAGCGTAAATGGTAAAATTCTT +
Preference number: 1 (lower is better)
Translates to: RGRLVNTMGFGVWSD*VWFSIPMSVNGKIL
Trigger: AAGAATTTTACCATTTACGCTCATAGGAATACTAAACCAAACCCAATCAGACCAAACTCCAAAGCCCATTGTGTTTACAAGTCTGCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 90 bp GAGGCTGTGATCATTTGGTTAGATACAGCATTAATTGTCACAACTTaGCTTTCAGAAACAAGAATACTGCACAAACTCAAGCATGCATTG +
Preference number: 1 (lower is better)
Translates to: EAVIIWLDTALIVTT*LSETRILHKLKHAL
Trigger: CAATGCATGCTTGAGTTTGTGCAGTATTCTTGTTTCTGAAAGTCAAGTTGTGACAATTAATGCTGTATCTAACCAAATGATCACAGCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 90 bp CCCAGCAGGTGGCAGCTCAGATTGCTGCAGTGTTGTAATTATAACTaGTTGTACTTAAGTTATGGATGTAGAGAATATGTTTCATTCATT +
Preference number: 1 (lower is better)
Translates to: PSRWQLRLLQCCNYN*LYLSYGCREYVSFI
Trigger: AATGAATGAAACATATTCTCTACATCCATAACTTAAGTACAATCAGTTATAATTACAACACTGCAGCAATCTGAGCTGCCACCTGCTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 90 bp ATTTCATTTATAATCCTCGCCCTACAATTACCTAAGTACTGTTTCTaGAGGTTAACCTGTATGCTACGCTCAGTCATATACCTTTCAAAG +
Preference number: 1 (lower is better)
Translates to: ISFIILALQLPKYCF*RLTCMLRSVIYLSK
Trigger: CTTTGAAAGGTATATGACTGAGCGTAGCATACAGGTTAACCTGCAGAAACAGTACTTAGGTAATTGTAGGGCGAGGATTATAAATGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR CCA 90 bp AGACTTGTAAACACAATGGGCTTTGGAGTTTGGTCTGATTGGGTTTaGTTTAGTATTCCTATGAGCGTAAATGGTAAAATTCTTCTGATA +
Preference number: 1 (lower is better)
Translates to: RLVNTMGFGVWSDWV*FSIPMSVNGKILLI
Trigger: TATCAGAAGAATTTTACCATTTACGCTCATAGGAATACTAAACCAAACCCAATCAGACCAAACTCCAAAGCCCATTGTGTTTACAAGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 90 bp TTTGATCTTAAAATAATCACTATAACCTGGACATACTGTACTAGATaGTGTTTTTGTCTGACTTCTACTCTGTCAATCTCTTTGCACCTC +
Preference number: 1 (lower is better)
Translates to: FDLKIITITWTYCTR*CFCLTSTLSISLHL
Trigger: GAGGTGCAAAGAGATTGACAGAGTAGAAGTCAGACAAAAACAGCATCTAGTACAGTATGTCCAGGTTATAGTGATTATTTTAAGATCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CCA 90 bp CTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGGGGGAGCACTTTTGGTaGCACCAAGGCTGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: LPYTNQKLSAQWATVLTRGEHFW*HQGWCG
Trigger: CCCACACCAGCCTTGGTGCCACCAAAAGTGCTCCCC...CCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CCA 90 bp AAACCTTGCCTCACAGGTGGGCACCAAGCTCCCCTTCCCTCTGCTTTCCATGTTCCCTCCCTCTGCCCATaGCCCAGAAAGCCCTTTCCT +
Preference number: 2 (lower is better)
Translates to: KPCLTGGHQAPLPSAFHVPSLCP*PRKPFP
Trigger: AGGAAAGGGCTTTCTGGGCCATGGGCAGAGGGAGGG...AACATGGAAAGCAGAGGGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR GCA 90 bp AAACCTTGCCTCACAGGTGGGCACCAAGCTCCCCTTCCCTCTGCTTTCCATGTTGTCTTGCCAGCCTCCTaGTGGCAGACACTTCTCTGC +
Preference number: 2 (lower is better)
Translates to: KPCLTGGHQAPLPSAFHVVLPAS*WQTLLC
Trigger: GCAGAGAAGTGTCTGCCAGCAGGAGGCTGGCAAGAC...AACATGGAAAGCAGAGGGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CCA 90 bp AAACCTTGCCTCACAGGTGGGCACCAAGCTCCCCTTCCCTCTGCTTTCCATGTTCTGCTGCTGCTGAGGTaGCCACTTTCAGCAAGCCCT +
Preference number: 2 (lower is better)
Translates to: KPCLTGGHQAPLPSAFHVLLLLR*PLSASP
Trigger: AGGGCTTGCTGAAAGTGGCCACCTCAGCAGCAGCAG...AACATGGAAAGCAGAGGGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 90 bp AGTTTACCTGACGGCATCTGCCATGGCTTGGCAGGAACTCTGGCTTaGGGAGAGAGCAGCAGCAAGGTATTCAAGCACCACCTCCACCCA +
Preference number: 2 (lower is better)
Translates to: SLPDGICHGLAGTLA*GESSSKVFKHHLHP
Trigger: TGGGTGGAGGTGGTGCTTGAATACCTTGCTGCTGCTCTCTCCCAAAGCCAGAGTTCCTGCCAAGCCATGGCAGATGCCGTCAGGTAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CCA 90 bp CTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGGCAGTTTCCCCTACATaGCACCTGACCCTTGTGCCT +
Preference number: 2 (lower is better)
Translates to: LPYTNQKLSAQWATVLTRAVSPT*HLTLVP
Trigger: AGGCACAAGGGTCAGGTGCCATGTAGGGGAAACTGC...CCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CCA 90 bp AAACCTTGCCTCACAGGTGGGCACCAAGCTCCCCTTCCCTCTGCTTTCCATGTTGCATCTGCCATGGCTTaGCAGGAACTCTGGCTTTGG +
Preference number: 2 (lower is better)
Translates to: KPCLTGGHQAPLPSAFHVASAMA*QELWLW
Trigger: CCAAAGCCAGAGTTCCTGCCAAGCCATGGCAGATGC...AACATGGAAAGCAGAGGGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR TCA 90 bp AATTGGAAGATGCTTCTTGATTGTAGTTCCCATGGGGAAGAGGGAGGCTGTGATCCCCTACATGGCACCTaGCCCTTGTGCCTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: NWKMLLDCSSHGEEGGCDPLHGT*PLCLPP
Trigger: GGGAGGGAGGCACAAGGGTCAGGTGCCATGTAGGGG...ATCACAGCCTCCCTCTTCCCCATGGGAACTACAATCAAGAAGCATCTTCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR GCA 90 bp CTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGGAGCCTCCAGAGGAATaGAGCCCTGTTGATCACATG +
Preference number: 2 (lower is better)
Translates to: LPYTNQKLSAQWATVLTREPPEE*SPVDHM
Trigger: CATGTGATCAACAGGGCTGCATTCCTCTGGAGGCTC...CCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR GCA 90 bp AAACCTTGCCTCACAGGTGGGCACCAAGCTCCCCTTCCCTCTGCTTTCCATGTTAAGATGTGCTGTCCCTaGCAACTCCTGCACCAGCTT +
Preference number: 2 (lower is better)
Translates to: KPCLTGGHQAPLPSAFHVKMCCP*QLLHQL
Trigger: AAGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTT...AACATGGAAAGCAGAGGGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR TCA 90 bp AGGTTAAGGACCTTGACGTGGGAAGATTATTCTGGATTATCTAGGTGGGCGCAAGGACGAGGAGAACAATaGCCCCCTCCCCAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: RLRTLTWEDYSGLSRWAQGRGEQ*PPPQAV
Trigger: CACAGCCTGGGGAGGGGGTCATTGTTCTCCTCGTCC...TTGCGCCCACCTAGATAATCCAGAATAATCTTCCCACGTCAAGGTCCTTAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR TCA 90 bp CTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGACTGAGAACAGCTGTTaGGCAGTTTACCTGACGGCA +
Preference number: 2 (lower is better)
Translates to: LPYTNQKLSAQWATVLTRTENSC*AVYLTA
Trigger: TGCCGTCAGGTAAACTGCTCAACAGCTGTTCTCAGT...CCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR GCA 90 bp CTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGACCACTATCCCATGCTaGACTAGTCCCTACCAAGTC +
Preference number: 2 (lower is better)
Translates to: LPYTNQKLSAQWATVLTRTTIPC*TSPYQV
Trigger: GACTTGGTAGGGACTAGTGCAGCATGGGATAGTGGT...CCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 90 bp AGTGTCAGCTCACCAGGTCAGAAATTGTTATTGGACCCTAAAACCTaGCCTCACAGGTGGGCACCAAGCTCCCCTTCCCTCTGCTTTCCA +
Preference number: 2 (lower is better)
Translates to: SVSSPGQKLLLDPKT*PHRWAPSSPSLCFP
Trigger: TGGAAAGCAGAGGGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGTTTTAGGGTCCAATAACAATTTCTGACCTGGTGAGCTGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR TCA 90 bp CTGGAACATCAGAACGTTTCCCTTAGACCGATCCCAGCAGGTGGCAGCTCAGATACATGCAACAAATTGTaGCCCTGCTCCCCACAAGTC +
Preference number: 2 (lower is better)
Translates to: LEHQNVSLRPIPAGGSSDTCNKL*PCSPQV
Trigger: GACTTGTGGGGAGCAGGGTCACAATTTGTTGCATGT...ATCTGAGCTGCCACCTGCTGGGATCGGTCTAAGGGAAACGTTCTGATGTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 90 bp TGTAGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATaGCAGGATTTGAAGATGAAGGGGCCCATGAGCCAAGGAATGCCA +
Preference number: 2 (lower is better)
Translates to: CRKPESWHLRRTELS*QDLKMKGPMSQGMP
Trigger: TGGCATTCCTTGGCTCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR GCA 90 bp AGCCATGTAGAACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAACAGGGGTGGCAAACTaGTCCTGCAGTTTAACCCTG +
Preference number: 2 (lower is better)
Translates to: SHVEQTAVCQLVEAKQPITGVAN*SCSLTL
Trigger: CAGGGTTAAACTGCAGGAGCAGTTTGCCACCCCTGT...TATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGTTCTACATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR CCA 90 bp ACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCTTCAGTTGCGCACCAAGGCTGGTGTaGGGTAGTGGAGAGAGCACT +
Preference number: 2 (lower is better)
Translates to: TALLGLIFSTWLIIVFSCAPRLV*GSGEST
Trigger: AGTGCTCTCTCCACTACCCCACACCAGCCTTGGTGC...GCAACTGAAGACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR CCA 90 bp AAACCTTGCCTCACAGGTGGGCACCAAGCTCCCCTTCCCTCTGCTTTCCATGTTCTCTGGATGAATACATaGTGGCAACAGTCCATGACA +
Preference number: 2 (lower is better)
Translates to: KPCLTGGHQAPLPSAFHVLWMNT*WQQSMT
Trigger: TGTCATGGACTGTTGCCACCATGTATTCATCCAGAG...AACATGGAAAGCAGAGGGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR TCA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACGCAGCTTGCAGTCTCTaGGCCTCTGAGATCCCTGAT +
Preference number: 2 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENAACSL*ASEIPD
Trigger: ATCAGGGATCTCAGAGGCTCAGAGACTGCAAGCTGC...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR TCA 90 bp CTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGACAGTCCATGACACCTaGAAACATCATTTGTGGAGT +
Preference number: 2 (lower is better)
Translates to: LPYTNQKLSAQWATVLTRTVHDT*KHHLWS
Trigger: ACTCCACAAATGATGTTTTCAGGTGTCATGGACTGT...CCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR TCA 90 bp CTGGAACATCAGAACGTTTCCCTTAGACCGATCCCAGCAGGTGGCAGCTCAGATGTTCCCACATCGGGTTaGCTGTCTTTGTTTTGTCAT +
Preference number: 2 (lower is better)
Translates to: LEHQNVSLRPIPAGGSSDVPTSG*LSLFCH
Trigger: ATGACAAAACAAAGACAGTCAACCCGATGTGGGAAC...ATCTGAGCTGCCACCTGCTGGGATCGGTCTAAGGGAAACGTTCTGATGTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACACCAGACTGTGAAGCCTaGAGAACAGCCTGGGGGAGC +
Preference number: 2 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITPDCEA*RTAWGS
Trigger: GCTCCCCCAGGCTGTTCTCCAGGCTTCACAGTCTGG...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR CCA 90 bp ATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCTGGTGGCACCAAGGCTaGTGTGGGGTAGTGGAGAGA +
Preference number: 2 (lower is better)
Translates to: MFHTALLGLIFSTWLIIVWWHQG*CGVVER
Trigger: TCTCTCCACTACCCCACACCAGCCTTGGTGCCACCA...GACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR CCA 90 bp CTGGAACATCAGAACGTTTCCCTTAGACCGATCCCAGCAGGTGGCAGCTCAGATTGGATGAATACATGGTaGCAACAGTCCATGACACCT +
Preference number: 2 (lower is better)
Translates to: LEHQNVSLRPIPAGGSSDWMNTW*QQSMTP
Trigger: AGGTGTCATGGACTGTTGCCACCATGTATTCATCCA...ATCTGAGCTGCCACCTGCTGGGATCGGTCTAAGGGAAACGTTCTGATGTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CCA 90 bp AAACCTTGCCTCACAGGTGGGCACCAAGCTCCCCTTCCCTCTGCTTTCCATGTTTTCTCCTGCAGGCTATaGTTCATCATGCAAATAGCT +
Preference number: 2 (lower is better)
Translates to: KPCLTGGHQAPLPSAFHVFSCRL*FIMQIA
Trigger: AGCTATTTGCATGATGAACCATAGCCTGCAGGAGAA...AACATGGAAAGCAGAGGGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CCA 90 bp CTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGACAGGCCTGCTTACTTaGGATGTAGGGTTAGTAAAT +
Preference number: 2 (lower is better)
Translates to: LPYTNQKLSAQWATVLTRTGLLT*DVGLVN
Trigger: ATTTACTAACCCTACATCCCAAGTAAGCAGGCCTGT...CCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR TCA 90 bp TTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGAACAGCCTGGGGGAGCTaGACAAATGCACAACACCTC +
Preference number: 2 (lower is better)
Translates to: LIFHECLKKFPSEVSAKGTAWGS*TNAQHL
Trigger: GAGGTGTTGTGCATTTGTTCAGCTCCCCCAGGCTGT...TCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR TCA 90 bp TCTTCTCCACATTTCCCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATCAGTTTAACCCTGCCTaGCTCTCCCAAGCACCAGAC +
Preference number: 2 (lower is better)
Translates to: SSPHFPKTNQRETPHCFHQFNPA*LSQAPD
Trigger: GTCTGGTGCTTGGGAGAGTCAGGCAGGGTTAAACTG...ATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGGGAAATGTGGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR TCA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGGGACGAGGAGAACAATaGCCCCCTCCCCAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKGRGEQ*PPPQAV
Trigger: CACAGCCTGGGGAGGGGGTCATTGTTCTCCTCGTCC...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR GCA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGGGGAGCTGAACAAATaGACAACACCTCATGCTGTC +
Preference number: 2 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFGELNK*TTPHAV
Trigger: GACAGCATGAGGTGTTGTGCATTTGTTCAGCTCCCC...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR GCA 90 bp AGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGTGTTTTGTCATTGCTTaGTCTGGCTGTGTCTCCCTC +
Preference number: 2 (lower is better)
Translates to: RKPESWHLRRTELSLQDLCFVIA*SGCVSL
Trigger: GAGGGAGACACAGCCAGAGCAAGCAATGACAAAACA...CAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CCA 90 bp CTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGGTCAGAAATTGTTATTaGACCCTAAAACCTTGCCTC +
Preference number: 2 (lower is better)
Translates to: LPYTNQKLSAQWATVLTRVRNCY*TLKPCL
Trigger: GAGGCAAGGTTTTAGGGTCCAATAACAATTTCTGAC...CCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 90 bp CACTGCCCCTTTCCACCTCCTCACCAGCTCACCTGTACAAGAGAATaGATCTCAACTGAGTGTCAGCTCACCAGGTCAGAAATTGTTATT +
Preference number: 2 (lower is better)
Translates to: HCPFPPPHQLTCTRE*ISTECQLTRSEIVI
Trigger: AATAACAATTTCTGACCTGGTGAGCTGACACTCAGTTGAGATCAATTCTCTTGTACAGGTGAGCTGGTGAGGAGGTGGAAAGGGGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR TCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACAACAGCCTGGGGGAGCTaGACAAATGCACAACACCTC +
Preference number: 2 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITTAWGS*TNAQHL
Trigger: GAGGTGTTGTGCATTTGTTCAGCTCCCCCAGGCTGT...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR GCA 90 bp AGGTTAAGGACCTTGACGTGGGAAGATTATTCTGGATTATCTAGGTGGGCGCAAGGGGAGCTGAACAAATaGACAACACCTCATGCTGTC +
Preference number: 2 (lower is better)
Translates to: RLRTLTWEDYSGLSRWAQGELNK*TTPHAV
Trigger: GACAGCATGAGGTGTTGTGCATTTGTTCAGCTCCCC...TTGCGCCCACCTAGATAATCCAGAATAATCTTCCCACGTCAAGGTCCTTAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR GCA 90 bp TCTTCTCCACATTTCCCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATACAGGGGTGGCAAACTaGTCCTGCAGTTTAACCCTG +
Preference number: 2 (lower is better)
Translates to: SSPHFPKTNQRETPHCFHTGVAN*SCSLTL
Trigger: CAGGGTTAAACTGCAGGAGCAGTTTGCCACCCCTGT...ATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGGGAAATGTGGAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR GCA 90 bp ACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCTTCAGTTGCGAACAAACGGCTGTCTaGCAACTGGTAGAGGCAAAG +
Preference number: 2 (lower is better)
Translates to: TALLGLIFSTWLIIVFSCEQTAV*QLVEAK
Trigger: CTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGTTC...GCAACTGAAGACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR GCA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACGGCACAGCTTACCTATaGCCATGGAAAGAACTGCGT +
Preference number: 2 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENGTAYL*PWKELR
Trigger: ACGCAGTTCTTTCCATGGGCATAGGTAAGCTGTGCC...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR CCA 90 bp ACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCTTCAGTTGCAAGCAGCCAATAATCTaGACAGGGGTGGCAAACTGC +
Preference number: 2 (lower is better)
Translates to: TALLGLIFSTWLIIVFSCKQPII*TGVANC
Trigger: GCAGTTTGCCACCCCTGTCCAGATTATTGGCTGCTT...GCAACTGAAGACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR CCA 90 bp TATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGAGGGGGAGCACTTTTGGTaGCACCAAGGCTGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: YATLSHIPFKVTNATAKEGEHFW*HQGWCG
Trigger: CCCACACCAGCCTTGGTGCCACCAAAAGTGCTCCCC...CTCTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR CCA 90 bp CTGGAACATCAGAACGTTTCCCTTAGACCGATCCCAGCAGGTGGCAGCTCAGATGATCTTACTGTCTTATaGCCCAGAACTGCATTTGAT +
Preference number: 2 (lower is better)
Translates to: LEHQNVSLRPIPAGGSSDDLTVL*PRTAFD
Trigger: ATCAAATGCAGTTCTGGGCCATAAGACAGTAAGATC...ATCTGAGCTGCCACCTGCTGGGATCGGTCTAAGGGAAACGTTCTGATGTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CCA 90 bp AAACCTTGCCTCACAGGTGGGCACCAAGCTCCCCTTCCCTCTGCTTTCCATGTTTTAAGGACCTTGACGTaGGAAGATTATTCTGGATTA +
Preference number: 2 (lower is better)
Translates to: KPCLTGGHQAPLPSAFHVLRTLT*EDYSGL
Trigger: TAATCCAGAATAATCTTCCCACGTCAAGGTCCTTAA...AACATGGAAAGCAGAGGGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CCA 90 bp TCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGTGATAACCTTGCCTCACAGGTaGGCACCAAGCTCCCCTTCC +
Preference number: 2 (lower is better)
Translates to: SNEISIGCQATVRNCIVITLPHR*APSSPS
Trigger: GGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGT...TATCACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR TCA 90 bp ATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGTTCATCTGCAACAGCTaGAGGCACAGCTTACCTATG +
Preference number: 2 (lower is better)
Translates to: ITTMFHTALLGLIFSTWLFICNS*RHSLPM
Trigger: CATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAA...CAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACATGGTTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR CCA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGGCACCAAGGCTGGTGTaGGGTAGTGGAGAGAGCACT +
Preference number: 2 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKAPRLV*GSGEST
Trigger: AGTGCTCTCTCCACTACCCCACACCAGCCTTGGTGC...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR CCA 90 bp CTGGAACATCAGAACGTTTCCCTTAGACCGATCCCAGCAGGTGGCAGCTCAGATGCTATCATGACAAAATaGAGCAGCCTACTATATCTA +
Preference number: 2 (lower is better)
Translates to: LEHQNVSLRPIPAGGSSDAIMTK*SSLLYL
Trigger: TAGATATAGTAGGCTGCTCCATTTTGTCATGATAGC...ATCTGAGCTGCCACCTGCTGGGATCGGTCTAAGGGAAACGTTCTGATGTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 90 bp TTGTGGCCACCTAGGTTTAGTGTACATGAAATTGGAAGATGCTTCTaGATTGTAGTTCCCATGGGGAAGAGGGAGGCTGTGATCATTTGG +
Preference number: 2 (lower is better)
Translates to: LWPPRFSVHEIGRCF*IVVPMGKREAVIIW
Trigger: CCAAATGATCACAGCCTCCCTCTTCCCCATGGGAACTACAATCAAGAAGCATCTTCCAATTTCATGTACACTAAACCTAGGTGGCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 90 bp CTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTaGACTCGGAATCATGTTGTGCACTATAGTCAAATGTACTGTAAA +
Preference number: 2 (lower is better)
Translates to: LPYTNQKLSAQWATV*TRNHVVHYSQMYCK
Trigger: TTTACAGTACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR TCA 90 bp GTAGAGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCACATGTAATGCAGGGTaGACAGAACATTTCATCTGC +
Preference number: 2 (lower is better)
Translates to: VEFSVRSRILQPCFTQPCTCNAG*TEHFIC
Trigger: GCAGATGAAATGTTCTGTTCACCCTGCATTACATGT...GCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR GCA 90 bp CAACACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGATTAGCTATTTCTATTaGACATCTACCCACAGCCTG +
Preference number: 2 (lower is better)
Translates to: QHLMLSSQRGNLLGRRCRISYFY*TSTHSL
Trigger: CAGGCTGTGGGTAGATGTGCAATAGAAATAGCTAAT...CCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR GCA 90 bp TTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGATGCCAGGTTGATGTTTaGAAAGCAGGGCACTCTTCT +
Preference number: 2 (lower is better)
Translates to: LIFHECLKKFPSEVSAKGCQVDV*KAGHSS
Trigger: AGAAGAGTGCCCTGCTTTGCAAACATCAACCTGGCA...TCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR GCA 90 bp TTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGATCCTCAAGCTTTCCTTaGCTTCCAGCCACTGCAAAT +
Preference number: 2 (lower is better)
Translates to: LIFHECLKKFPSEVSAKGSSSFP*LPATAN
Trigger: ATTTGCAGTGGCTGGAAGGCAAGGAAAGCTTGAGGA...TCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR GCA 90 bp AATTGGAAGATGCTTCTTGATTGTAGTTCCCATGGGGAAGAGGGAGGCTGTGATGTTACTGTCCCCTTGTaGCTGGTCACTAGTAACTTT +
Preference number: 2 (lower is better)
Translates to: NWKMLLDCSSHGEEGGCDVTVPL*LVTSNF
Trigger: AAAGTTACTAGTGACCAGGCACAAGGGGACAGTAAC...ATCACAGCCTCCCTCTTCCCCATGGGAACTACAATCAAGAAGCATCTTCCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 90 bp CTATCCCATGCTGCACTAGTCCCTACCAAGTCTTCAACCCTCAATTaGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCA +
Preference number: 2 (lower is better)
Translates to: LSHAALVPTKSSTLN*IFHECLKKFPSEVS
Trigger: TGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAAATTGAGGGTTGAAGACTTGGTAGGGACTAGTGCAGCATGGGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR TCA 90 bp AACATTTTGGTCACTAGTAGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGCCAGTTTAACCCTGCCTaGCTCTCCCAAGCACCAGAC +
Preference number: 2 (lower is better)
Translates to: NILVTSSQNLIRPYVLKGQFNPA*LSQAPD
Trigger: GTCTGGTGCTTGGGAGAGTCAGGCAGGGTTAAACTG...GCCTTTCAGGACATATGGCCTTATAAGATTTTGACTACTAGTGACCAAAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR TCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACAGCATTTTTGCCAGGTTaGTGTTTGCAAAGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITAFLPG*CLQSRA
Trigger: TGCCCTGCTTTGCAAACATCAACCTGGCAAAAATGC...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR TCA 90 bp TCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGTGATATCTTCACTAGCTGTGTaGCTTGGGCAAGCAGCTTGC +
Preference number: 2 (lower is better)
Translates to: SNEISIGCQATVRNCIVISSLAV*LGQAAC
Trigger: GCAAGCTGCTTGCCCAAGTCACACAGCTAGTGAAGA...TATCACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CCA 90 bp ATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCGCTTACCTATGCCCATaGAAAGAACTGCGTGGAAAA +
Preference number: 2 (lower is better)
Translates to: MFHTALLGLIFSTWLIIVAYLCP*KELRGK
Trigger: TTTTCCACGCAGTTCTTTCCATGGGCATAGGTAAGC...GACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR GCA 90 bp TGTTTCTGCAGGTTAACCTGTATGCTACGCTCAGTCATATACCTTTCAAAGTTAATGCACAACACCTCATaGTGTCAAGCCAGAGGGGAA +
Preference number: 2 (lower is better)
Translates to: CFCRLTCMLRSVIYLSKLMHNTS*CQARGE
Trigger: TTCCCCTCTGGCTTGACAGCATGAGGTGTTGTGCAT...TAACTTTGAAAGGTATATGACTGAGCGTAGCATACAGGTTAACCTGCAGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR GCA 90 bp GAAGGCCGTGAAGCATTTACACTCTTTAAGACAAATTCCCATCCAAAAATAGTTGTGGCAAACTGCTCCTaGAGTTTAACCCTGCCTGAC +
Preference number: 2 (lower is better)
Translates to: EGREAFTLFKTNSHPKIVVANCS*SLTLPD
Trigger: GTCAGGCAGGGTTAAACTGCAGGAGCAGTTTGCCAC...AACTATTTTTGGATGGGAATTTGTCTTAAAGAGTGTAAATGCTTCACGGCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR GCA 90 bp AATTGGAAGATGCTTCTTGATTGTAGTTCCCATGGGGAAGAGGGAGGCTGTGATGCCCATGGAAAGAACTaGGTGGAAAATTCATTTGTT +
Preference number: 2 (lower is better)
Translates to: NWKMLLDCSSHGEEGGCDAHGKN*VENSFV
Trigger: AACAAATGAATTTTCCACGCAGTTCTTTCCATGGGC...ATCACAGCCTCCCTCTTCCCCATGGGAACTACAATCAAGAAGCATCTTCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CCA 90 bp TATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGAGACTAGCTGTGTGACTTaGGCAAGCAGCTTGCAGTCT +
Preference number: 2 (lower is better)
Translates to: YATLSHIPFKVTNATAKETSCVT*ASSLQS
Trigger: AGACTGCAAGCTGCTTGCCCAAGTCACACAGCTAGT...CTCTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR CAA 90 bp GACAGGGCAAAAGAGATTTTGCAGATGCAATTAAGGTTAAGGACCTaGACGTGGGAAGATTATTCTGGATTATCTAGGTGGGCGCAATTT +
Preference number: 2 (lower is better)
Translates to: DRAKEILQMQLRLRT*TWEDYSGLSRWAQF
Trigger: AAATTGCGCCCACCTAGATAATCCAGAATAATCTTCCCACGTCAAGGTCCTTAACCTTAATTGCATCTGCAAAATCTCTTTTGCCCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR TCA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGTTCATCTGCAACAGCTaGAGGCACAGCTTACCTATG +
Preference number: 2 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKFICNS*RHSLPM
Trigger: CATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAA...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR GCA 90 bp AACATTTTGGTCACTAGTAGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGCGAACAAACGGCTGTCTaGCAACTGGTAGAGGCAAAG +
Preference number: 2 (lower is better)
Translates to: NILVTSSQNLIRPYVLKGEQTAV*QLVEAK
Trigger: CTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGTTC...GCCTTTCAGGACATATGGCCTTATAAGATTTTGACTACTAGTGACCAAAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR GCA 90 bp ATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCCCTAAGTACTGTTTCTaGAGGTTAACCTGTATGCTA +
Preference number: 2 (lower is better)
Translates to: MFHTALLGLIFSTWLIIVPKYCF*RLTCML
Trigger: TAGCATACAGGTTAACCTGCAGAAACAGTACTTAGG...GACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR CAA 90 bp AACCCTGTATCCTGTGATTATTTACCTGACAGGGCAAAAGAGATTTaGCAGATGCAATTAAGGTTAAGGACCTTGACGTGGGAAGATTGT +
Preference number: 2 (lower is better)
Translates to: NPVSCDYLPDRAKEI*QMQLRLRTLTWEDC
Trigger: ACAATCTTCCCACGTCAAGGTCCTTAACCTTAATTGCATCTGCAAAATCTCTTTTGCCCTGTCAGGTAAATAATCACAGGATACAGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR GCA 90 bp ATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCAATTCCAGATGTGCATaGCTCAAAAGAAAAATCCCA +
Preference number: 2 (lower is better)
Translates to: MFHTALLGLIFSTWLIIVNSRCA*LKRKIP
Trigger: TGGGATTTTTCTTTTGAGGCATGCACATCTGGAATT...GACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR GCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACACCTAAGTACTGTTTCTaGAGGTTAACCTGTATGCTA +
Preference number: 2 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITPKYCF*RLTCML
Trigger: TAGCATACAGGTTAACCTGCAGAAACAGTACTTAGG...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR GCA 90 bp AATTGGAAGATGCTTCTTGATTGTAGTTCCCATGGGGAAGAGGGAGGCTGTGATACATACTGTACTAGATaGTGTTTTTGTCTGACTTCT +
Preference number: 2 (lower is better)
Translates to: NWKMLLDCSSHGEEGGCDTYCTR*CFCLTS
Trigger: AGAAGTCAGACAAAAACAGCATCTAGTACAGTATGT...ATCACAGCCTCCCTCTTCCCCATGGGAACTACAATCAAGAAGCATCTTCCAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR GCA 90 bp AACATTTTGGTCACTAGTAGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGCTGGGCTTTGTTCTCCTaGAGGCTATGGTTCATCATG +
Preference number: 2 (lower is better)
Translates to: NILVTSSQNLIRPYVLKGWALFS*RLWFIM
Trigger: CATGATGAACCATAGCCTGCAGGAGAACAAAGCCCA...GCCTTTCAGGACATATGGCCTTATAAGATTTTGACTACTAGTGACCAAAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CCA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGGCTTACCTATGCCCATaGAAAGAACTGCGTGGAAAA +
Preference number: 2 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKAYLCP*KELRGK
Trigger: TTTTCCACGCAGTTCTTTCCATGGGCATAGGTAAGC...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR CAA 90 bp TGCCACGCAGCTGACTTCAATATAGTAGCTCTAATATTATGGTCCTaGAGGATCTTACTGTCTTATGGCCCAGAACTGCATTTGATTAAA +
Preference number: 2 (lower is better)
Translates to: CHAADFNIVALILWS*RILLSYGPELHLIK
Trigger: TTTAATCAAATGCAGTTCTGGGCCATAAGACAGTAAGATCCTCAAGGACCATAATATTAGAGCTACTATATTGAAGTCAGCTGCGTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 90 bp ACGTGGGAAGATTGTGATTATTTACCTGACAGGGCAAAAGAGATTTaGCAGATGCAATTAAGGTTAAGGACCTTGACGTGGGAAGATTAT +
Preference number: 2 (lower is better)
Translates to: TWEDCDYLPDRAKEI*QMQLRLRTLTWEDY
Trigger: ATAATCTTCCCACGTCAAGGTCCTTAACCTTAATTGCATCTGCAAAATCTCTTTTGCCCTGTCAGGTAAATAATCACAATCTTCCCACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR GCA 90 bp AACATTTTGGTCACTAGTAGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGCGGAGCTGAGCAACACTaGTGGATGAATAAACACATG +
Preference number: 2 (lower is better)
Translates to: NILVTSSQNLIRPYVLKGGAEQH*WMNKHM
Trigger: CATGTGTTTATTCATCCAGCAGTGTTGCTCAGCTCC...GCCTTTCAGGACATATGGCCTTATAAGATTTTGACTACTAGTGACCAAAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR GCA 90 bp TCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGTGATAAGCCTCTTCTCTAAATaGTTCCTCAAGCTTTCCTTG +
Preference number: 2 (lower is better)
Translates to: SNEISIGCQATVRNCIVISLFSK*FLKLSL
Trigger: CAAGGAAAGCTTGAGGAAGCATTTAGAGAAGAGGCT...TATCACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CCA 90 bp GAAGGCCGTGAAGCATTTACACTCTTTAAGACAAATTCCCATCCAAAAATAGTTACATCATTTGTGGAGTaGCGTAGAGTTCAGTGTTCG +
Preference number: 2 (lower is better)
Translates to: EGREAFTLFKTNSHPKIVTSFVE*RRVQCS
Trigger: CGAACACTGAACTCTACGCCACTCCACAAATGATGT...AACTATTTTTGGATGGGAATTTGTCTTAAAGAGTGTAAATGCTTCACGGCCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 90 bp GGAGGCTGTGATCATTTGGTTAGATACAGCATTAATTGTCACAACTaGACTTTCAGAAACAAGAATACTGCACAAACTCAAGCATGCATT +
Preference number: 2 (lower is better)
Translates to: GGCDHLVRYSINCHN*TFRNKNTAQTQACI
Trigger: AATGCATGCTTGAGTTTGTGCAGTATTCTTGTTTCTGAAAGTCAAGTTGTGACAATTAATGCTGTATCTAACCAAATGATCACAGCCTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR GCA 90 bp AACATTTTGGTCACTAGTAGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGCATTAGCTATTTCTATTaGACATCTACCCACAGCCTG +
Preference number: 2 (lower is better)
Translates to: NILVTSSQNLIRPYVLKGISYFY*TSTHSL
Trigger: CAGGCTGTGGGTAGATGTGCAATAGAAATAGCTAAT...GCCTTTCAGGACATATGGCCTTATAAGATTTTGACTACTAGTGACCAAAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR TCA 90 bp AACATTTTGGTCACTAGTAGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGCCTACAGAAGAGCAGTTaGAGTGATTTATGCTTGATT +
Preference number: 2 (lower is better)
Translates to: NILVTSSQNLIRPYVLKGLQKSS*SDLCLI
Trigger: AATCAAGCATAAATCACTTCAACTGCTCTTCTGTAG...GCCTTTCAGGACATATGGCCTTATAAGATTTTGACTACTAGTGACCAAAATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR GCA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGCATTTGTTGCATTTTTaGCAGGTTGATGTTTGCAAA +
Preference number: 2 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKHLLHF*QVDVCK
Trigger: TTTGCAAACATCAACCTGGCAAAAATGCAACAAATG...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR CCA 90 bp TCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGTGATATTGATTTTCTCCACGTaGTTGATAATTGTCTTCAGT +
Preference number: 2 (lower is better)
Translates to: SNEISIGCQATVRNCIVILIFST*LIIVFS
Trigger: ACTGAAGACAATTATCAACCACGTGGAGAAAATCAA...TATCACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR GCA 90 bp GAAGGCCGTGAAGCATTTACACTCTTTAAGACAAATTCCCATCCAAAAATAGTTGTTGGGTGGCAAATTTaGTTCTATGGAAGATTTTTA +
Preference number: 2 (lower is better)
Translates to: EGREAFTLFKTNSHPKIVVGWQI*FYGRFL
Trigger: TAAAAATCTTCCATAGAAGCAAATTTGCCACCCAAC...AACTATTTTTGGATGGGAATTTGTCTTAAAGAGTGTAAATGCTTCACGGCCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 72 bp GCCAGTTCCCATGCCAGCTCTCCCCAAGTGCTCCACTaGGGCTTCCGTAACACCTCTGTTCCCACATCGGGT +
Preference number: 3 (lower is better)
Translates to: ASSHASSPQVLH*GFRNTSVPTSG
Trigger: ACCCGATGTGGGAACAGAGGTGTTACGGAAGCCTCAGTGGAGCACTTGGGGAGAGCTGGCATGGGAACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 72 bp TTCCAGAAACTCTGGGAGCCCTCCCCTTACATTTCCTaGGTCATGGGGCCAGCCCTAGCTGCTGGAGGGACT +
Preference number: 3 (lower is better)
Translates to: FQKLWEPSPYIS*VMGPALAAGGT
Trigger: AGTCCCTCCAGCAGCTAGGGCTGGCCCCATGACCCAGGAAATGTAAGGGGAGGGCTCCCAGAGTTTCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 72 bp AGCATCCATAACCTAACAGGCAGAGCCCTAGCGATGTaGATCAAGTTTCCTGAGCCCGGGGGCGGTGGAGCC +
Preference number: 3 (lower is better)
Translates to: SIHNLTGRALAM*IKFPEPGGGGA
Trigger: GGCTCCACCGCCCCCGGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCTGCCTGTTAGGTTATGGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 72 bp CCAGCCCTAGCTGCTGGAGGGACTGAGAACAGCTGTTaGGCAGTTTACCTGACGGCATCTGCCATGGCTTGG +
Preference number: 3 (lower is better)
Translates to: PALAAGGTENSC*AVYLTASAMAW
Trigger: CCAAGCCATGGCAGATGCCGTCAGGTAAACTGCTCAACAGCTGTTCTCAGTCCCTCCAGCAGCTAGGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 72 bp AGGGGTGGCAAACTGCTCCTGCAGTTTAACCCTGCCTaGCTCTCCCAAGCACCAGACTGTGAAGCCTGGAGA +
Preference number: 3 (lower is better)
Translates to: RGGKLLLQFNPA*LSQAPDCEAWR
Trigger: TCTCCAGGCTTCACAGTCTGGTGCTTGGGAGAGTCAGGCAGGGTTAAACTGCAGGAGCAGTTTGCCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR GCA 72 bp CTTCAAGAGCCAGTTCCCATGCCAGCTCTCCCCAAGTaGTCCACTGAGGCTTCCGTAACACCTCTGTTCCCA +
Preference number: 3 (lower is better)
Translates to: LQEPVPMPALPK*STEASVTPLFP
Trigger: TGGGAACAGAGGTGTTACGGAAGCCTCAGTGGAGCACTTGGGGAGAGCTGGCATGGGAACTGGCTCTTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 72 bp CTGAACCTCCATAGTGCCTCCAAGATGTGCTGTCCCTaGCAACTCCTGCACCAGCTTGACTGGTGGTGGAAG +
Preference number: 3 (lower is better)
Translates to: LNLHSASKMCCP*QLLHQLDWWWK
Trigger: CTTCCACCACCAGTCAAGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 72 bp AAAGCTCCCCTGAACCTCCATAGTGCCTCCAAGATGTaGTGTCCCTGCCAACTCCTGCACCAGCTTGACTGG +
Preference number: 3 (lower is better)
Translates to: KAPLNLHSASKM*CPCQLLHQLDW
Trigger: CCAGTCAAGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACTATGGAGGTTCAGGGGAGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 72 bp GGTCATCTTTATACAGGGCAATTGTGCTGCTGCTGCTaGGGTGGCCACTTTCAGCAAGCCCTGTGTGCAGGG +
Preference number: 3 (lower is better)
Translates to: GHLYTGQLCCCC*GGHFQQALCAG
Trigger: CCCTGCACACAGGGCTTGCTGAAAGTGGCCACCTCAGCAGCAGCAGCACAATTGCCCTGTATAAAGATGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 72 bp CAGCCAATAATCTGGACAGGGGTGGCAAACTGCTCCTaGAGTTTAACCCTGCCTGACTCTCCCAAGCACCAG +
Preference number: 3 (lower is better)
Translates to: QPIIWTGVANCS*SLTLPDSPKHQ
Trigger: CTGGTGCTTGGGAGAGTCAGGCAGGGTTAAACTGCAGGAGCAGTTTGCCACCCCTGTCCAGATTATTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR GCA 72 bp GCTTGCTCTGGCTGTGTCTCCCTCATTAGACTGGGATaGCTTCAAGGTAGGGACCCTATCTGGGTCAGCTTG +
Preference number: 3 (lower is better)
Translates to: ACSGCVSLIRLG*LQGRDPIWVSL
Trigger: CAAGCTGACCCAGATAGGGTCCCTACCTTGAAGGCATCCCAGTCTAATGAGGGAGACACAGCCAGAGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 72 bp TACCTGACGGCATCTGCCATGGCTTGGCAGGAACTCTaGCTTTGGGAGAGAGCAGCAGCAAGGTATTCAAGC +
Preference number: 3 (lower is better)
Translates to: YLTASAMAWQEL*LWERAAARYSS
Trigger: GCTTGAATACCTTGCTGCTGCTCTCTCCCAAAGCCAGAGTTCCTGCCAAGCCATGGCAGATGCCGTCAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 72 bp CTACCACTGGGTAGTGCCATTTTGGCCGGACATGGTTaGGGTAACCCAGTGACACCAGCACTGATTGGACTG +
Preference number: 3 (lower is better)
Translates to: LPLGSAILAGHG*GNPVTPALIGL
Trigger: CAGTCCAATCAGTGCTGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAAAATGGCACTACCCAGTGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 72 bp CAAGCTTTCCTTGCCTTCCAGCCACTGCAAATGACTTaGAGTTTCCCCTACATGGCACCTGACCCTTGTGCC +
Preference number: 3 (lower is better)
Translates to: QAFLAFQPLQMT*SFPYMAPDPCA
Trigger: GGCACAAGGGTCAGGTGCCATGTAGGGGAAACTGCAAGTCATTTGCAGTGGCTGGAAGGCAAGGAAAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 72 bp AAGGACCCAACTCCTAACAGCATTGGTGCTCCCTCATaGAATTTGACAGTGTCTTGCCAGCCTCCTGCTGGC +
Preference number: 3 (lower is better)
Translates to: KDPTPNSIGAPS*NLTVSCQPPAG
Trigger: GCCAGCAGGAGGCTGGCAAGACACTGTCAAATTTCATGAGGGAGCACCAATGCTGTTAGGAGTTGGGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 72 bp GGGGCAGATGAACTTGTGTCAACCATGCACACCCTGTaGGAACCAAGTACCTGTGTTTCTAAGGCGGGCACT +
Preference number: 3 (lower is better)
Translates to: GADELVSTMHTL*EPSTCVSKAGT
Trigger: AGTGCCCGCCTTAGAAACACAGGTACTTGGTTCTCACAGGGTGTGCATGGTTGACACAAGTTCATCTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 72 bp CCACAGGCCCAGAGAACCAGTTGGGCTTTGTTCTCCTaGAGGCTATGGTTCATCATGCAAATAGCTCCTGTG +
Preference number: 3 (lower is better)
Translates to: PQAQRTSWALFS*RLWFIMQIAPV
Trigger: CACAGGAGCTATTTGCATGATGAACCATAGCCTGCAGGAGAACAAAGCCCAACTGGTTCTCTGGGCCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 72 bp CACCAGGTCAGAAATTGTTATTGGACCCTAAAACCTTaGCTCACAGGTGGGCACCAAGCTCCCCTTCCCTCT +
Preference number: 3 (lower is better)
Translates to: HQVRNCYWTLKP*LTGGHQAPLPS
Trigger: AGAGGGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGTTTTAGGGTCCAATAACAATTTCTGACCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 72 bp GTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTaGACAGGGGTGGCAAACTGCTCCTGCAGTTTAACC +
Preference number: 3 (lower is better)
Translates to: VCQLVEAKQPII*TGVANCSCSLT
Trigger: GGTTAAACTGCAGGAGCAGTTTGCCACCCCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR CCA 72 bp TCATTGCTTGCTCTGGCTGTGTCTCCCTCATTAGACTaGGATGCCTTCAAGGTAGGGACCCTATCTGGGTCA +
Preference number: 3 (lower is better)
Translates to: SLLALAVSPSLD*DAFKVGTLSGS
Trigger: TGACCCAGATAGGGTCCCTACCTTGAAGGCATCCCAGTCTAATGAGGGAGACACAGCCAGAGCAAGCAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 72 bp GGACTGCCCTACACCAATCAGAAGCTCAGTGCCCAATaGGCCACTGTTTTGACTCGGAATCATGTTGTGCAC +
Preference number: 3 (lower is better)
Translates to: GLPYTNQKLSAQ*ATVLTRNHVVH
Trigger: GTGCACAACATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 72 bp TTCCTCAAGCTTTCCTTGCCTTCCAGCCACTGCAAATaGCTTGCAGTTTCCCCTACATGGCACCTGACCCTT +
Preference number: 3 (lower is better)
Translates to: FLKLSLPSSHCK*LAVSPTWHLTL
Trigger: AAGGGTCAGGTGCCATGTAGGGGAAACTGCAAGTCATTTGCAGTGGCTGGAAGGCAAGGAAAGCTTGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 72 bp CAACTCCTAACAGCATTGGTGCTCCCTCATGAAATTTaGCAGTGTCTTGCCAGCCTCCTGCTGGCAGACACT +
Preference number: 3 (lower is better)
Translates to: QLLTALVLPHEI*QCLASLLLADT
Trigger: AGTGTCTGCCAGCAGGAGGCTGGCAAGACACTGTCAAATTTCATGAGGGAGCACCAATGCTGTTAGGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 72 bp TGGAGAACCTTTCCCACCTGTAGAAAGCCAGAGAGCTaGCACCTGAGAAGGACAGAACTGTCATTGCAGGAT +
Preference number: 3 (lower is better)
Translates to: WRTFPTCRKPES*HLRRTELSLQD
Trigger: ATCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCTACAGGTGGGAAAGGTTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CAA 90 bp CTGGAACATCAGAACGTTTCCCTTAGACCGATCCCAGCAGGTGGCAGCTCAGATATTGGAAGATGCTTCTaGATTGTAGTTCCCATGGGG +
Preference number: 3 (lower is better)
Translates to: LEHQNVSLRPIPAGGSSDIGRCF*IVVPMG
Trigger: CCCCATGGGAACTACAATCAAGAAGCATCTTCCAAT...ATCTGAGCTGCCACCTGCTGGGATCGGTCTAAGGGAAACGTTCTGATGTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 72 bp CCACATCGGGTTGACTGTCTTTGTTTTGTCATTGCTTaGTCTGGCTGTGTCTCCCTCATTAGACTGGGATGC +
Preference number: 3 (lower is better)
Translates to: PHRVDCLCFVIA*SGCVSLIRLGC
Trigger: GCATCCCAGTCTAATGAGGGAGACACAGCCAGAGCAAGCAATGACAAAACAAAGACAGTCAACCCGATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 72 bp GGCAGACACTTCTCTGCAGTGAATACCACTATCCCATaGTGCACTAGTCCCTACCAAGTCTTCAACCCTCAA +
Preference number: 3 (lower is better)
Translates to: GRHFSAVNTTIP*CTSPYQVFNPQ
Trigger: TTGAGGGTTGAAGACTTGGTAGGGACTAGTGCAGCATGGGATAGTGGTATTCACTGCAGAGAAGTGTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 72 bp ACTGATTGGACTGCCCTACACCAATCAGAAGCTCAGTaGCCAATGGGCCACTGTTTTGACTCGGAATCATGT +
Preference number: 3 (lower is better)
Translates to: TDWTALHQSEAQ*PMGHCFDSESC
Trigger: ACATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAGTCCAATCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 72 bp CACCACAATCTCCCAAAAGGGGATTTCACCCTCCCTTaGTCATCTTTATACAGGGCAATTGTGCTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: HHNLPKGDFTLP*SSLYRAIVLLL
Trigger: CAGCAGCAGCACAATTGCCCTGTATAAAGATGACCAAGGGAGGGTGAAATCCCCTTTTGGGAGATTGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 72 bp AAATTGTTATTGGACCCTAAAACCTTGCCTCACAGGTaGGCACCAAGCTCCCCTTCCCTCTGCTTTCCATGT +
Preference number: 3 (lower is better)
Translates to: KLLLDPKTLPHR*APSSPSLCFPC
Trigger: ACATGGAAAGCAGAGGGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGTTTTAGGGTCCAATAACAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 72 bp TTTCTAAGGCGGGCACTCAAGGTGAGGGGTGCATTCTaGCCAAAGAAACAAAAGCTGTGGTTTCAGGACCAT +
Preference number: 3 (lower is better)
Translates to: FLRRALKVRGAF*PKKQKLWFQDH
Trigger: ATGGTCCTGAAACCACAGCTTTTGTTTCTTTGGCCAGAATGCACCCCTCACCTTGAGTGCCCGCCTTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CAA 90 bp ATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGCCATTCTCCTTCCTTTaGGGGAGCACTTTTGGTGGC +
Preference number: 3 (lower is better)
Translates to: ITTMFHTALLGLIFSTWLPFSFL*GSTFGG
Trigger: GCCACCAAAAGTGCTCCCCAAAAGGAAGGAGAATGG...CAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACATGGTTGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR CAA 90 bp CTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGATGTGGCTCTGCCATTaGAATATAATCACCGAGAAT +
Preference number: 3 (lower is better)
Translates to: LPYTNQKLSAQWATVLTRMWLCH*NIITEN
Trigger: ATTCTCGGTGATTATATTCAAATGGCAGAGCCACAT...CCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 72 bp CAAAAGCTGTGGTTTCAGGACCATGCCGTGTGTAGCTaGTCTGTACGGGACGTGTATGTAAGGAAGAGCAAT +
Preference number: 3 (lower is better)
Translates to: QKLWFQDHAVCS*SVRDVYVRKSN
Trigger: ATTGCTCTTCCTTACATACACGTCCCGTACAGATCAGCTACACACGGCATGGTCCTGAAACCACAGCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 72 bp GCTTTTACCGTGGGGCAGATGAACTTGTGTCAACCATaGACACCCTGTGAGAACCAAGTACCTGTGTTTCTA +
Preference number: 3 (lower is better)
Translates to: AFTVGQMNLCQP*TPCENQVPVFL
Trigger: TAGAAACACAGGTACTTGGTTCTCACAGGGTGTGCATGGTTGACACAAGTTCATCTGCCCCACGGTAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CAA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGAGAGGGAATTGATCTaGGATATGAAAATGCTGCCC +
Preference number: 3 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFERELI*DMKMLP
Trigger: GGGCAGCATTTTCATATCCAAGATCAATTCCCTCTC...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR GCA 72 bp TTAGCCTCTTCTCTAAATGCTTCCTCAAGCTTTCCTTaGCTTCCAGCCACTGCAAATGACTTGCAGTTTCCC +
Preference number: 3 (lower is better)
Translates to: LASSLNASSSFP*LPATANDLQFP
Trigger: GGGAAACTGCAAGTCATTTGCAGTGGCTGGAAGGCAAGGAAAGCTTGAGGAAGCATTTAGAGAAGAGGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 72 bp GGACTGAGTAAAGGAGACACTCAGATGCTACTCAGATaGTGGCTTCAGCTAAGTATTTTGCAAAGCCTCTCG +
Preference number: 3 (lower is better)
Translates to: GLSKGDTQMLLR*WLQLSILQSLS
Trigger: CGAGAGGCTTTGCAAAATACTTAGCTGAAGCCAGCATCTGAGTAGCATCTGAGTGTCTCCTTTACTCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CAA 90 bp ATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCTGCATTTTTGCCAGGTaGATGTTTGCAAAGCAGGGC +
Preference number: 3 (lower is better)
Translates to: MFHTALLGLIFSTWLIIVCIFAR*MFAKQG
Trigger: GCCCTGCTTTGCAAACATCAACCTGGCAAAAATGCA...GACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR TCA 72 bp CTGGATGAATACATGGTGGCAACAGTCCATGACACCTaGAAACATCATTTGTGGAGTGGCGTAGAGTTCAGT +
Preference number: 3 (lower is better)
Translates to: LDEYMVATVHDT*KHHLWSGVEFS
Trigger: ACTGAACTCTACGCCACTCCACAAATGATGTTTTCAGGTGTCATGGACTGTTGCCACCATGTATTCATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR TCA 72 bp TATCTTAAAGTTCAGTGGTTTCATTCAAAGCTCCCCTaGACCTCCATAGTGCCTCCAAGATGTGCTGTCCCT +
Preference number: 3 (lower is better)
Translates to: YLKVQWFHSKLP*TSIVPPRCAVP
Trigger: AGGGACAGCACATCTTGGAGGCACTATGGAGGTTCAGGGGAGCTTTGAATGAAACCACTGAACTTTAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 72 bp CCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTaGCTCGGAATCATGTTGTGCACTATAGTCAAATGT +
Preference number: 3 (lower is better)
Translates to: PIRSSVPNGPLF*LGIMLCTIVKC
Trigger: ACATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 72 bp TGGCCACCTAGGTTTAGTGTACATGAAATTGGAAGATaGTTCTTGATTGTAGTTCCCATGGGGAAGAGGGAG +
Preference number: 3 (lower is better)
Translates to: WPPRFSVHEIGR*FLIVVPMGKRE
Trigger: CTCCCTCTTCCCCATGGGAACTACAATCAAGAAGCATCTTCCAATTTCATGTACACTAAACCTAGGTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 72 bp CTGAGTAAAGGAGACACTCAGATGCTACTCAGATGCTaGCTTCAGCTAAGTATTTTGCAAAGCCTCTCGTGT +
Preference number: 3 (lower is better)
Translates to: LSKGDTQMLLRC*LQLSILQSLSC
Trigger: ACACGAGAGGCTTTGCAAAATACTTAGCTGAAGCCAGCATCTGAGTAGCATCTGAGTGTCTCCTTTACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 72 bp GGACAGCTGTTTGGTTCTGATACAGGCCTGCTTACTTaGGATGTAGGGTTAGTAAATGGGGTTTCTGCTTTA +
Preference number: 3 (lower is better)
Translates to: GQLFGSDTGLLT*DVGLVNGVSAL
Trigger: TAAAGCAGAAACCCCATTTACTAACCCTACATCCCAAGTAAGCAGGCCTGTATCAGAACCAAACAGCTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CAA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTACAGTGTCAATATCATaGTCTTCATTAGAAGGACGG +
Preference number: 3 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFTVSIS*SSLEGR
Trigger: CCGTCCTTCTAATGAAGACAATGATATTGACACTGT...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR CAA 90 bp AATTGGAAGATGCTTCTTGATTGTAGTTCCCATGGGGAAGAGGGAGGCTGTGATAGGACAGAACTGTCATaGCAGGATTTGAAGATGAAG +
Preference number: 3 (lower is better)
Translates to: NWKMLLDCSSHGEEGGCDRTELS*QDLKMK
Trigger: CTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCT...ATCACAGCCTCCCTCTTCCCCATGGGAACTACAATCAAGAAGCATCTTCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 72 bp CCCTACCAAGTCTTCAACCCTCAATTTGATCTTCCATaGGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGC +
Preference number: 3 (lower is better)
Translates to: PYQVFNPQFDLP*VSQKVPLRSFS
Trigger: GCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAAATTGAGGGTTGAAGACTTGGTAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 72 bp TACAGGCCTGCTTACTTGGGATGTAGGGTTAGTAAATaGGGTTTCTGCTTTAAAGGACTGACTTGCTATCAC +
Preference number: 3 (lower is better)
Translates to: YRPAYLGCRVSK*GFCFKGLTCYH
Trigger: GTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCCAAGTAAGCAGGCCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CAA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGATGTGAGAATTAGTTaGACCTTAATTCCAGATGTG +
Preference number: 3 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFDVRIS*TLIPDV
Trigger: CACATCTGGAATTAAGGTCAAACTAATTCTCACATC...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR CAA 90 bp GTAGAGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCGATAATTGTCTTCAGTaGCTGCTAAGTGATTTTGCA +
Preference number: 3 (lower is better)
Translates to: VEFSVRSRILQPCFTQPCDNCLQ*LLSDFA
Trigger: TGCAAAATCACTTAGCAGCAACTGAAGACAATTATC...GCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR CAA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGATAATTGTCTTCAGTaGCTGCTAAGTGATTTTGCA +
Preference number: 3 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFDNCLQ*LLSDFA
Trigger: TGCAAAATCACTTAGCAGCAACTGAAGACAATTATC...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR-3UTR CAA 90 bp TCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGTGATAGGCCCAGAACTGCATTaGATTAAAGAAGGCTCCCCT +
Preference number: 3 (lower is better)
Translates to: SNEISIGCQATVRNCIVIGPELH*IKEGSP
Trigger: AGGGGAGCCTTCTTTAATCAAATGCAGTTCTGGGCC...TATCACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 72 bp GAGAAGTATAGCAATCTATGTAAATGTAATCCTCAGTaGGGTTCCTCAGTGCTAGGTCCCATAGGATTGTCG +
Preference number: 3 (lower is better)
Translates to: EKYSNLCKCNPQ*GSSVLGPIGLS
Trigger: CGACAATCCTATGGGACCTAGCACTGAGGAACCTCACTGAGGATTACATTTACATAGATTGCTATACTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 72 bp AGAGGCAGACTTGTAAACACAATGGGCTTTGGAGTTTaGTCTGATTGGGTTTGGTTTAGTATTCCTATGAGC +
Preference number: 3 (lower is better)
Translates to: RGRLVNTMGFGV*SDWVWFSIPMS
Trigger: GCTCATAGGAATACTAAACCAAACCCAATCAGACCAAACTCCAAAGCCCATTGTGTTTACAAGTCTGCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CAA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGTGCATTTTTGCCAGGTaGATGTTTGCAAAGCAGGGC +
Preference number: 3 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKCIFAR*MFAKQG
Trigger: GCCCTGCTTTGCAAACATCAACCTGGCAAAAATGCA...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR GCA 72 bp ATAATCCTCGCCCTACAATTACCTAAGTACTGTTTCTaGAGGTTAACCTGTATGCTACGCTCAGTCATATAC +
Preference number: 3 (lower is better)
Translates to: IILALQLPKYCF*RLTCMLRSVIY
Trigger: GTATATGACTGAGCGTAGCATACAGGTTAACCTGCAGAAACAGTACTTAGGTAATTGTAGGGCGAGGATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR GCA 72 bp GCTTACTTGGGATGTAGGGTTAGTAAATGGGGTTTCTaGTTTAAAGGACTGACTTGCTATCACACAAAAGAG +
Preference number: 3 (lower is better)
Translates to: AYLGCRVSKWGF*FKGLTCYHTKE
Trigger: CTCTTTTGTGTGATAGCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACTAACCCTACATCCCAAGTAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 72 bp CAGAAACAAGAATACTGCACAAACTCAAGCATGCATTaGAGCATGTGTTACTATTTAGAAAAGAGTGCAGCC +
Preference number: 3 (lower is better)
Translates to: QKQEYCTNSSMH*SMCYYLEKSAA
Trigger: GGCTGCACTCTTTTCTAAATAGTAACACATGCTCCAATGCATGCTTGAGTTTGTGCAGTATTCTTGTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR TCA 72 bp AAAGCCTCTCGTGTTCTTACAAGTTTGTGGCTATCATaGCAAAATGGAGCAGCCTACTATATCTACATATAC +
Preference number: 3 (lower is better)
Translates to: KASRVLTSLWLS*QNGAAYYIYIY
Trigger: GTATATGTAGATATAGTAGGCTGCTCCATTTTGTCATGATAGCCACAAACTTGTAAGAACACGAGAGGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 72 bp ATTTTGCAGATGCAATTAAGGTTAAGGACCTTGACGTaGGAAGATTGTGATTATTTACCTGACAGGGCAAAA +
Preference number: 3 (lower is better)
Translates to: ILQMQLRLRTLT*EDCDYLPDRAK
Trigger: TTTTGCCCTGTCAGGTAAATAATCACAATCTTCCCACGTCAAGGTCCTTAACCTTAATTGCATCTGCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR-3UTR CAA 90 bp AACATTTTGGTCACTAGTAGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGCTCTTTGCACCTCCATTaGTTCATCTGTGAAATGAAG +
Preference number: 3 (lower is better)
Translates to: NILVTSSQNLIRPYVLKGSLHLH*FICEMK
Trigger: CTTCATTTCACAGATGAACAAATGGAGGTGCAAAGA...GCCTTTCAGGACATATGGCCTTATAAGATTTTGACTACTAGTGACCAAAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CCA 72 bp AACACAATGGGCTTTGGAGTTTGGTCTGATTGGGTTTaGTTTAGTATTCCTATGAGCGTAAATGGTAAAATT +
Preference number: 3 (lower is better)
Translates to: NTMGFGVWSDWV*FSIPMSVNGKI
Trigger: AATTTTACCATTTACGCTCATAGGAATACTAAACCAAACCCAATCAGACCAAACTCCAAAGCCCATTGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR GCA 72 bp AAAATAATCACTATAACCTGGACATACTGTACTAGATaGTGTTTTTGTCTGACTTCTACTCTGTCAATCTCT +
Preference number: 3 (lower is better)
Translates to: KIITITWTYCTR*CFCLTSTLSIS
Trigger: AGAGATTGACAGAGTAGAAGTCAGACAAAAACAGCATCTAGTACAGTATGTCCAGGTTATAGTGATTATTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp ACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTGGACAGGCGGGCCGGGCTTGACTaGAGCCGAGGTCGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: TNGCLPTGRGKAANNLDRRAGLD*SRGRRR
Trigger: CCGACGGCGACCTCGGCTCCAGTCAAGCCCGGCCCG...CCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp CAGGGTGAACAGAACATTTCATCTGCAACAGCTGAAGGCACAGCTTACCTATGCGAGCCGGGCCGGGCTTaGCTGGAGCCGAGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: QGEQNISSATAEGTAYLCEPGRA*LEPRSP
Trigger: CGGCGACCTCGGCTCCAGTCAAGCCCGGCCCGGCTC...GCATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAAATGTTCTGTTCACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp AAATGCTGCCCTGGCACAGAGGTAGGAGCTGAGCAACACTGCTGGATGAATAAAGGGCCGGACTGGATCTaGTCGCTCCCGCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: KCCPGTEVGAEQHCWMNKGPDWI*SLPPGG
Trigger: GCCTCCCGGCGGGAGCGAGCAGATCCAGTCCGGCCC...TTTATTCATCCAGCAGTGTTGCTCAGCTCCTACCTCTGTGCCAGGGCAGCATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326932.8
CDS-3UTR CCA 90 bp CAACACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGCGCTGCGGGCCGGACTaGATCTGCTCGCTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: QHLMLSSQRGNLLGRRCRRCGPD*ICSLPP
Trigger: CGGCGGGAGCGAGCAGATCCAGTCCGGCCCGCAGCG...CCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326932.8
CDS-3UTR CCA 90 bp AAATGCTGCCCTGGCACAGAGGTAGGAGCTGAGCAACACTGCTGGATGAATAAAAGCCGCCGCCCCGACTaGACCGAGTTGCGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: KCCPGTEVGAEQHCWMNKSRRPD*TELRCG
Trigger: CCCGCAGCGCAACTCGGTCCAGTCGGGGCGGCGGCT...TTTATTCATCCAGCAGTGTTGCTCAGCTCCTACCTCTGTGCCAGGGCAGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326932.8
CDS-3UTR TCA 90 bp AAGCCTGGTCAGCCCACGCCTAAAGCACACACCTGGGGAAATAAATTAGCTATTCGCAGCCGCCGCCTGTaGTGCTGGAGCCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: KPGQPTPKAHTWGNKLAIRSRRL*CWSPRQ
Trigger: CTGGCGAGGGCTCCAGCATCACAGGCGGCGGCTGCG...AATAGCTAATTTATTTCCCCAGGTGTGTGCTTTAGGCGTGGGCTGACCAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AAATGCTGCCCTGGCACAGAGGTAGGAGCTGAGCAACACTGCTGGATGAATAAAGTGGCCCCAAGCCGCTaGATCTCCGCTCTGCGCCCG +
Preference number: 4 (lower is better)
Translates to: KCCPGTEVGAEQHCWMNKVAPSR*ISALRP
Trigger: CGGGCGCAGAGCGGAGATGCAGCGGCTTGGGGCCAC...TTTATTCATCCAGCAGTGTTGCTCAGCTCCTACCTCTGTGCCAGGGCAGCATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp TCTTCTCCACATTTCCCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATGAGCCGGGCCGGGCTTaGCTGGAGCCGAGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: SSPHFPKTNQRETPHCFHEPGRA*LEPRSP
Trigger: CGGCGACCTCGGCTCCAGTCAAGCCCGGCCCGGCTC...ATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGGGAAATGTGGAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp ACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTGGACAGGCCCCTACATGGCACCTaGCCCTTGTGCCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TNGCLPTGRGKAANNLDRPLHGT*PLCLPP
Trigger: GGGAGGGAGGCACAAGGGTCAGGTGCCATGTAGGGG...CCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AGCCATGTAGAACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATACCGACTGGACCGAGTTaGGCTGCGGGCCGGACTGGA +
Preference number: 4 (lower is better)
Translates to: SHVEQTAVCQLVEAKQPIPTGPS*AAGRTG
Trigger: TCCAGTCCGGCCCGCAGCGCAACTCGGTCCAGTCGG...TATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGTTCTACATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326932.8
CDS-3UTR GCA 90 bp ATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGGCTGCATCTCCGCTCTaGGCCCGCAGCCGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: ITTMFHTALLGLIFSTWLAASPL*ARSRRL
Trigger: CAGGCGGCGGCTGCGGGCGCAGAGCGGAGATGCAGC...CAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACATGGTTGTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp ACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTGGACAGGCCTCTGGCCCCGGCATaGCTGGCAGGTGTACTGGAA +
Preference number: 4 (lower is better)
Translates to: TNGCLPTGRGKAANNLDRPLAPA*LAGVLE
Trigger: TTCCAGTACACCTGCCAGCCATGCCGGGGCCAGAGG...CCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp AGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGGTGCAGAGCATCCTCTaGCCCCGGCATGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SSVFAVAYYNHVSHSPARVQSIL*PRHGWQ
Trigger: CTGCCAGCCATGCCGGGGCCAGAGGATGCTCTGCAC...CCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp ACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTGGACAGGCAGCACAGCCCCGGCTaGCAGTCCCTCTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: TNGCLPTGRGKAANNLDRQHSPG*QSLWLS
Trigger: TGACAACCAGAGGGACTGCCAGCCGGGGCTGTGCTG...CCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp ACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGAAGACGGCTGGCGGGGTCATaGCAAAGCTCGCCCTCCACG +
Preference number: 4 (lower is better)
Translates to: TSCCQARGETYWEEDVGRRLAGS*QSSPST
Trigger: CGTGGAGGGCGAGCTTTGCCATGACCCCGCCAGCCG...TCTTCCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR CAA 72 bp GACGGCATCTGCCATGGCTTGGCAGGAACTCTGGCTTaGGGAGAGAGCAGCAGCAAGGTATTCAAGCACCAC +
Preference number: 4 (lower is better)
Translates to: DGICHGLAGTLA*GESSSKVFKHH
Trigger: GTGGTGCTTGAATACCTTGCTGCTGCTCTCTCCCAAAGCCAGAGTTCCTGCCAAGCCATGGCAGATGCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp TTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGAGTGGCCCCAAGCCGCTaGATCTCCGCTCTGCGCCCG +
Preference number: 4 (lower is better)
Translates to: LIFHECLKKFPSEVSAKGVAPSR*ISALRP
Trigger: CGGGCGCAGAGCGGAGATGCAGCGGCTTGGGGCCAC...TCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp CTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGAGCAGCAGCTTCTTCTaGCTCCATCTCTTCCACCGC +
Preference number: 4 (lower is better)
Translates to: LPYTNQKLSAQWATVLTRSSSFF*LHLFHR
Trigger: GCGGTGGAAGAGATGGAGGCAGAAGAAGCTGCTGCT...CCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp ACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGAAGAGCAGGCACAGCAGGGTaGCCCCAAGCCGCTGCATCT +
Preference number: 4 (lower is better)
Translates to: TSCCQARGETYWEEDVGRAGTAG*PQAAAS
Trigger: AGATGCAGCGGCTTGGGGCCACCCTGCTGTGCCTGC...TCTTCCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp CCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATCTCCTCCCCTCAAACGGTCCAGAAGCCGGCTaGCGGGGTCATGGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: PKTNQRETPHCFHLLPSNGPEAG*RGHGKA
Trigger: AGCTTTGCCATGACCCCGCCAGCCGGCTTCTGGACC...GTTTGAGGGGAGGAGATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp AAATGCTGCCCTGGCACAGAGGTAGGAGCTGAGCAACACTGCTGGATGAATAAAGGTCCAGAAGCCGGCTaGCGGGGTCATGGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: KCCPGTEVGAEQHCWMNKGPEAG*RGHGKA
Trigger: AGCTTTGCCATGACCCCGCCAGCCGGCTTCTGGACC...TTTATTCATCCAGCAGTGTTGCTCAGCTCCTACCTCTGTGCCAGGGCAGCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp AAATGCTGCCCTGGCACAGAGGTAGGAGCTGAGCAACACTGCTGGATGAATAAAGGCAGAGGAGGCCACTaGCACAAGGGCATCGGTCCA +
Preference number: 4 (lower is better)
Translates to: KCCPGTEVGAEQHCWMNKGRGGH*HKGIGP
Trigger: TGGACCGATGCCCTTGTGCCAGTGGCCTCCTCTGCC...TTTATTCATCCAGCAGTGTTGCTCAGCTCCTACCTCTGTGCCAGGGCAGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp CTGGAACATCAGAACGTTTCCCTTAGACCGATCCCAGCAGGTGGCAGCTCAGATTGGTGGCACCAAGGCTaGTGTGGGGTAGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LEHQNVSLRPIPAGGSSDWWHQG*CGVVER
Trigger: TCTCTCCACTACCCCACACCAGCCTTGGTGCCACCA...ATCTGAGCTGCCACCTGCTGGGATCGGTCTAAGGGAAACGTTCTGATGTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp CAGGGTGAACAGAACATTTCATCTGCAACAGCTGAAGGCACAGCTTACCTATGCCGCGGAACATCTCATTaGGGGTGGCCTCCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: QGEQNISSATAEGTAYLCRGTSH*GWPPPA
Trigger: CGCAGGAGGAGGCCACCCTCAATGAGATGTTCCGCG...GCATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAAATGTTCTGTTCACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp ACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGAAGAGGACGAGGAGAACAATaGCCCCCTCCCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TSCCQARGETYWEEDVGRGRGEQ*PPPQAV
Trigger: CACAGCCTGGGGAGGGGGTCATTGTTCTCCTCGTCC...TCTTCCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp AAGCCTGGTCAGCCCACGCCTAAAGCACACACCTGGGGAAATAAATTAGCTATTTCGACCAGGTCAGAGTaGCCGACCCCCACTTCCACC +
Preference number: 4 (lower is better)
Translates to: KPGQPTPKAHTWGNKLAISTRSE*PTPTST
Trigger: GGTGGAAGTGGGGGTCGGGCACTCTGACCTGGTCGA...AATAGCTAATTTATTTCCCCAGGTGTGTGCTTTAGGCGTGGGCTGACCAGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AATTGGAAGATGCTTCTTGATTGTAGTTCCCATGGGGAAGAGGGAGGCTGTGATGTGCCTCCCTCCCTCTaGCCATGGCCCAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: NWKMLLDCSSHGEEGGCDVPPSL*PWPRKP
Trigger: GGGCTTTCTGGGCCATGGGCAGAGGGAGGGAGGCAC...ATCACAGCCTCCCTCTTCCCCATGGGAACTACAATCAAGAAGCATCTTCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp CTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGTCGATGATGCACTCGTaGCTCCTTCTGCCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: LPYTNQKLSAQWATVLTRSMMHS*LLLPSS
Trigger: CGAAGAAGGCAGAAGGAGCCACGAGTGCATCATCGA...CCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTTGGCCCCGGCATGGCTaGCAGGTGTACTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFWPRHG*QVYWKL
Trigger: CAGCTTCCAGTACACCTGCCAGCCATGCCGGGGCCA...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp ATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGGTGCAGAGCATCCTCTaGCCCCGGCATGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ITTMFHTALLGLIFSTWLVQSIL*PRHGWQ
Trigger: CTGCCAGCCATGCCGGGGCCAGAGGATGCTCTGCAC...CAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACATGGTTGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp CCTCCCCAGGCTGTGCTGAGAGAGGGAATTGATCTTGGATATGAAAATGCTGCCCCCTGGTGGCCATTTTaGTGCAGTGACCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: PPQAVLREGIDLGYENAAPWWPF*CSDPRH
Trigger: GTGTCTGGGGTCACTGCACCAAAATGGCCACCAGGG...GGCAGCATTTTCATATCCAAGATCAATTCCCTCTCTCAGCACAGCCTGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp CCTCCCCAGGCTGTGCTGAGAGAGGGAATTGATCTTGGATATGAAAATGCTGCCGGCTGGCAGTCCCTCTaGTTGTCACAGATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PPQAVLREGIDLGYENAAGWQSL*LSQMVP
Trigger: TGGGACCATCTGTGACAACCAGAGGGACTGCCAGCC...GGCAGCATTTTCATATCCAAGATCAATTCCCTCTCTCAGCACAGCCTGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp AGCCATGTAGAACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAAACAGCAGGCCTCTCTaGAAGGCACAGCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: SHVEQTAVCQLVEAKQPINSRPL*KAQHSP
Trigger: GGGGCTGTGCTGTGCCTTCCAGAGAGGCCTGCTGTT...TATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGTTCTACATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp CAACACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGCTCTCAGCCCCTACCTaGGGTGGACCAAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: QHLMLSSQRGNLLGRRCRLSAPT*GGPSTG
Trigger: ACCTGTGCTTGGTCCACCCCAGGTAGGGGCTGAGAG...CCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp AGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGGCCATTTTGGTGCAGTaGCCCCAGACACACAGCTGG +
Preference number: 4 (lower is better)
Translates to: RKPESWHLRRTELSLQDLAILVQ*PQTHSW
Trigger: CCAGCTGTGTGTCTGGGGTCACTGCACCAAAATGGC...CAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp CCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATCTCCTCCCCTCAAACGCCCTGTTGATCACATaGTCACCAGATGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PKTNQRETPHCFHLLPSNALLIT*SPDGCP
Trigger: GGGGCAGCCATCTGGTGATCATGTGATCAACAGGGC...GTTTGAGGGGAGGAGATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp ACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTGGACAGGAGCAGCAGCTTCTTCTaGCTCCATCTCTTCCACCGC +
Preference number: 4 (lower is better)
Translates to: TNGCLPTGRGKAANNLDRSSSFF*LHLFHR
Trigger: GCGGTGGAAGAGATGGAGGCAGAAGAAGCTGCTGCT...CCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp AGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGGTCCCTGCCAACTCCTaGACCAGCTTGACTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SSVFAVAYYNHVSHSPARVPANS*TSLTGG
Trigger: ACCACCAGTCAAGCTGGTGCAGGAGTTGGCAGGGAC...CCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AAATGCTGCCCTGGCACAGAGGTAGGAGCTGAGCAACACTGCTGGATGAATAAAACTGGCAGTACATGCTaGGCCCACAGTCCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: KCCPGTEVGAEQHCWMNKTGSTC*AHSPRR
Trigger: TCGACGAGGACTGTGGGCCCAGCATGTACTGCCAGT...TTTATTCATCCAGCAGTGTTGCTCAGCTCCTACCTCTGTGCCAGGGCAGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp GGAAACTTACTGGGAAGAAGATGTAGGAAGAAGCCTGGTCAGCCCACGCCTAAAACTGGCAGTACATGCTaGGCCCACAGTCCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: GNLLGRRCRKKPGQPTPKTGSTC*AHSPRR
Trigger: TCGACGAGGACTGTGGGCCCAGCATGTACTGCCAGT...TTTAGGCGTGGGCTGACCAGGCTTCTTCCTACATCTTCTTCCCAGTAAGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp ATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGTGGCCCCGGCATGGCTaGCAGGTGTACTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ITTMFHTALLGLIFSTWLWPRHG*QVYWKL
Trigger: CAGCTTCCAGTACACCTGCCAGCCATGCCGGGGCCA...CAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACATGGTTGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp CTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAACAAACGGCTGTCTGCCAACCTCTGGCCCCGGCATaGCTGGCAGGTGTACTGGAA +
Preference number: 4 (lower is better)
Translates to: LLPSNNYQSHVEQTAVCQPLAPA*LAGVLE
Trigger: TTCCAGTACACCTGCCAGCCATGCCGGGGCCAGAGG...TTGGCAGACAGCCGTTTGTTCTACATGGCTTTGATAATTGTTTGAGGGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp CCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATCTCCTCCCCTCAAACCCCTGGTGGCCATTTTaGTGCAGTGACCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: PKTNQRETPHCFHLLPSNPWWPF*CSDPRH
Trigger: GTGTCTGGGGTCACTGCACCAAAATGGCCACCAGGG...GTTTGAGGGGAGGAGATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp GTAGAGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCAACAGCAGGCCTCTCTaGAAGGCACAGCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: VEFSVRSRILQPCFTQPCNSRPL*KAQHSP
Trigger: GGGGCTGTGCTGTGCCTTCCAGAGAGGCCTGCTGTT...GCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp CAACACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGGCACCAAGGCTGGTGTaGGGTAGTGGAGAGAGCACT +
Preference number: 4 (lower is better)
Translates to: QHLMLSSQRGNLLGRRCRAPRLV*GSGEST
Trigger: AGTGCTCTCTCCACTACCCCACACCAGCCTTGGTGC...CCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp CCTCCCCAGGCTGTGCTGAGAGAGGGAATTGATCTTGGATATGAAAATGCTGCCCACCAGCTTGACTGGTaGTGGAAGAGGCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PPQAVLREGIDLGYENAAHQLDW*WKRPGR
Trigger: TCTTCCTGGCCTCTTCCACCACCAGTCAAGCTGGTG...GGCAGCATTTTCATATCCAAGATCAATTCCCTCTCTCAGCACAGCCTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp CCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATaGCAGGATTTGAAGATGAAGGGGCCCATGAGCCAA +
Preference number: 4 (lower is better)
Translates to: PESWHLRRTELS*QDLKMKGPMSQ
Trigger: TTGGCTCATGGGCCCCTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp TCACCAGGTCAGAAATTGTTATTGGACCCTAAAACCTaGCCTCACAGGTGGGCACCAAGCTCCCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SPGQKLLLDPKT*PHRWAPSSPSL
Trigger: GAGGGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGTTTTAGGGTCCAATAACAATTTCTGACCTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp CAACACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGACAGCCTGGGGGAGCTaGACAAATGCACAACACCTC +
Preference number: 4 (lower is better)
Translates to: QHLMLSSQRGNLLGRRCRTAWGS*TNAQHL
Trigger: GAGGTGTTGTGCATTTGTTCAGCTCCCCCAGGCTGT...CCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp GGAAACTTACTGGGAAGAAGATGTAGGAAGAAGCCTGGTCAGCCCACGCCTAAACAGTTTAACCCTGCCTaGCTCTCCCAAGCACCAGAC +
Preference number: 4 (lower is better)
Translates to: GNLLGRRCRKKPGQPTPKQFNPA*LSQAPD
Trigger: GTCTGGTGCTTGGGAGAGTCAGGCAGGGTTAAACTG...TTTAGGCGTGGGCTGACCAGGCTTCTTCCTACATCTTCTTCCCAGTAAGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp CCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATCTCCTCCCCTCAAACCAGTTTAACCCTGCCTaGCTCTCCCAAGCACCAGAC +
Preference number: 4 (lower is better)
Translates to: PKTNQRETPHCFHLLPSNQFNPA*LSQAPD
Trigger: GTCTGGTGCTTGGGAGAGTCAGGCAGGGTTAAACTG...GTTTGAGGGGAGGAGATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp TTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGAGGACGAGGAGAACAATaGCCCCCTCCCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LIFHECLKKFPSEVSAKGGRGEQ*PPPQAV
Trigger: CACAGCCTGGGGAGGGGGTCATTGTTCTCCTCGTCC...TCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp CAACACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGGCAGCTTGCAGTCTCTaGGCCTCTGAGATCCCTGAT +
Preference number: 4 (lower is better)
Translates to: QHLMLSSQRGNLLGRRCRAACSL*ASEIPD
Trigger: ATCAGGGATCTCAGAGGCTCAGAGACTGCAAGCTGC...CCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp GGAAACTTACTGGGAAGAAGATGTAGGAAGAAGCCTGGTCAGCCCACGCCTAAATCTCTTCCACCGCGCTaGGCAATTTGTGCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: GNLLGRRCRKKPGQPTPKSLPPR*AICAAC
Trigger: ACACGCAGCACAAATTGCGCAGCGCGGTGGAAGAGA...TTTAGGCGTGGGCTGACCAGGCTTCTTCCTACATCTTCTTCCCAGTAAGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp CTGGAACATCAGAACGTTTCCCTTAGACCGATCCCAGCAGGTGGCAGCTCAGATAGACATGAAGGTAGATaGCCTGCAGGTCCTATCAGC +
Preference number: 4 (lower is better)
Translates to: LEHQNVSLRPIPAGGSSDRHEGR*PAGPIS
Trigger: GCTGATAGGACCTGCAGGGCATCTACCTTCATGTCT...ATCTGAGCTGCCACCTGCTGGGATCGGTCTAAGGGAAACGTTCTGATGTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp ACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGAAGATCCCCATCACAGCACTaGCCCTTTCCACCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: TSCCQARGETYWEEDVGRSPSQH*PFPPPH
Trigger: GTGAGGAGGTGGAAAGGGGCAGTGCTGTGATGGGGA...TCTTCCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACAGCAGGCACAGCAGGGTaGCCCCAAGCCGCTGCATCT +
Preference number: 4 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITAGTAG*PQAAAS
Trigger: AGATGCAGCGGCTTGGGGCCACCCTGCTGTGCCTGC...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp CTGGAACATCAGAACGTTTCCCTTAGACCGATCCCAGCAGGTGGCAGCTCAGATAGGTGTACTGGAAGCTaGCAAACTGGCAGTACATGC +
Preference number: 4 (lower is better)
Translates to: LEHQNVSLRPIPAGGSSDRCTGS*QTGSTC
Trigger: GCATGTACTGCCAGTTTGCCAGCTTCCAGTACACCT...ATCTGAGCTGCCACCTGCTGGGATCGGTCTAAGGGAAACGTTCTGATGTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp ATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCCAGCACAGCCCCGGCTaGCAGTCCCTCTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: MFHTALLGLIFSTWLIIVQHSPG*QSLWLS
Trigger: TGACAACCAGAGGGACTGCCAGCCGGGGCTGTGCTG...GACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTAGGATCTCCCCATCTTaGTCACGGCTCCCCACGAAG +
Preference number: 4 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFRISPS*SRLPTK
Trigger: CTTCGTGGGGAGCCGTGACCAAGATGGGGAGATCCT...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp ACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCTTCAGTTGCCCAGACTGTGAAGCCTaGAGAACAGCCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TALLGLIFSTWLIIVFSCPDCEA*RTAWGS
Trigger: GCTCCCCCAGGCTGTTCTCCAGGCTTCACAGTCTGG...GCAACTGAAGACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp CTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAACAAACGGCTGTCTGCCAAGGGGAGCACTTTTGGTaGCACCAAGGCTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LLPSNNYQSHVEQTAVCQGEHFW*HQGWCG
Trigger: CCCACACCAGCCTTGGTGCCACCAAAAGTGCTCCCC...TTGGCAGACAGCCGTTTGTTCTACATGGCTTTGATAATTGTTTGAGGGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTACCGATCCCAGCAGGTaGCAGCTCAGATTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFTDPSR*QLRLLQ
Trigger: CTGCAGCAATCTGAGCTGCCACCTGCTGGGATCGGT...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp ACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTGGACAGGTGGGTAGTGCCATTTTaGCCGGACATGGTTGGGGTA +
Preference number: 4 (lower is better)
Translates to: TNGCLPTGRGKAANNLDRWVVPF*PDMVGV
Trigger: TACCCCAACCATGTCCGGCCAAAATGGCACTACCCA...CCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACACGCGGAACATCTCATTaGGGGTGGCCTCCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITRGTSH*GWPPPA
Trigger: CGCAGGAGGAGGCCACCCTCAATGAGATGTTCCGCG...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACGCCATTTTGGTGCAGTaGCCCCAGACACACAGCTGG +
Preference number: 4 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENAILVQ*PQTHSW
Trigger: CCAGCTGTGTGTCTGGGGTCACTGCACCAAAATGGC...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp CAGGGTGAACAGAACATTTCATCTGCAACAGCTGAAGGCACAGCTTACCTATGCGCAGCTTGCAGTCTCTaGGCCTCTGAGATCCCTGAT +
Preference number: 4 (lower is better)
Translates to: QGEQNISSATAEGTAYLCAACSL*ASEIPD
Trigger: ATCAGGGATCTCAGAGGCTCAGAGACTGCAAGCTGC...GCATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAAATGTTCTGTTCACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp AAATGCTGCCCTGGCACAGAGGTAGGAGCTGAGCAACACTGCTGGATGAATAAATCTTCACTAGCTGTGTaGCTTGGGCAAGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: KCCPGTEVGAEQHCWMNKSSLAV*LGQAAC
Trigger: GCAAGCTGCTTGCCCAAGTCACACAGCTAGTGAAGA...TTTATTCATCCAGCAGTGTTGCTCAGCTCCTACCTCTGTGCCAGGGCAGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp GGAAACTTACTGGGAAGAAGATGTAGGAAGAAGCCTGGTCAGCCCACGCCTAAATCTTCACTAGCTGTGTaGCTTGGGCAAGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: GNLLGRRCRKKPGQPTPKSSLAV*LGQAAC
Trigger: GCAAGCTGCTTGCCCAAGTCACACAGCTAGTGAAGA...TTTAGGCGTGGGCTGACCAGGCTTCTTCCTACATCTTCTTCCCAGTAAGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp GGAAACTTACTGGGAAGAAGATGTAGGAAGAAGCCTGGTCAGCCCACGCCTAAACATGCCGTGTGTAGCTaGTCTGTACGGGACGTGTAT +
Preference number: 4 (lower is better)
Translates to: GNLLGRRCRKKPGQPTPKHAVCS*SVRDVY
Trigger: ATACACGTCCCGTACAGATCAGCTACACACGGCATG...TTTAGGCGTGGGCTGACCAGGCTTCTTCCTACATCTTCTTCCCAGTAAGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp ACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGAAGAGCGCTGCGCAATTTGTaGTGCGTGTCCTCCATCAGT +
Preference number: 4 (lower is better)
Translates to: TSCCQARGETYWEEDVGRALRNL*CVSSIS
Trigger: ACTGATGGAGGACACGCAGCACAAATTGCGCAGCGC...TCTTCCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTTCTCTTCCACCGCGCTaGGCAATTTGTGCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFSLPPR*AICAAC
Trigger: ACACGCAGCACAAATTGCGCAGCGCGGTGGAAGAGA...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp ACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGAAGACAAACTGGCAGTACATaGTGGGCCCACAGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: TSCCQARGETYWEEDVGRQTGST*WAHSPR
Trigger: ACGAGGACTGTGGGCCCAGCATGTACTGCCAGTTTG...TCTTCCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp CAGGGTGAACAGAACATTTCATCTGCAACAGCTGAAGGCACAGCTTACCTATGCCAAACTGGCAGTACATaGTGGGCCCACAGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: QGEQNISSATAEGTAYLCQTGST*WAHSPR
Trigger: ACGAGGACTGTGGGCCCAGCATGTACTGCCAGTTTG...GCATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAAATGTTCTGTTCACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp AGCCATGTAGAACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATATGGTGGCCATTTTGGTaGAGTGACCCCAGACACACA +
Preference number: 4 (lower is better)
Translates to: SHVEQTAVCQLVEAKQPIWWPFW*SDPRHT
Trigger: TGTGTGTCTGGGGTCACTGCACCAAAATGGCCACCA...TATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGTTCTACATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp GTAGAGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCCCACGAAGGTCGGCTTaGACACATACACCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: VEFSVRSRILQPCFTQPCPRRSA*THTPGC
Trigger: ACAGCCTGGTGTATGTGTGCAAGCCGACCTTCGTGG...GCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTCCACGAAGGTCGGCTTaGACACATACACCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFPRRSA*THTPGC
Trigger: ACAGCCTGGTGTATGTGTGCAAGCCGACCTTCGTGG...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp CAACACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGACAGGGGTGGCAAACTaGTCCTGCAGTTTAACCCTG +
Preference number: 4 (lower is better)
Translates to: QHLMLSSQRGNLLGRRCRTGVAN*SCSLTL
Trigger: CAGGGTTAAACTGCAGGAGCAGTTTGCCACCCCTGT...CCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp ACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTGGACAGGGAACAAACGGCTGTCTaGCAACTGGTAGAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: TNGCLPTGRGKAANNLDREQTAV*QLVEAK
Trigger: CTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGTTC...CCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp CCTCCCCAGGCTGTGCTGAGAGAGGGAATTGATCTTGGATATGAAAATGCTGCCGGCACAGCTTACCTATaGCCATGGAAAGAACTGCGT +
Preference number: 4 (lower is better)
Translates to: PPQAVLREGIDLGYENAAGTAYL*PWKELR
Trigger: ACGCAGTTCTTTCCATGGGCATAGGTAAGCTGTGCC...GGCAGCATTTTCATATCCAAGATCAATTCCCTCTCTCAGCACAGCCTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp CTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGGGAGCTGAGCAACACTaGTGGATGAATAAACACATG +
Preference number: 4 (lower is better)
Translates to: LPYTNQKLSAQWATVLTRGAEQH*WMNKHM
Trigger: CATGTGTTTATTCATCCAGCAGTGTTGCTCAGCTCC...CCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AAGCCTGGTCAGCCCACGCCTAAAGCACACACCTGGGGAAATAAATTAGCTATTTCAGCAAGCCCTGTGTaGAGGGGCCTAGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: KPGQPTPKAHTWGNKLAISASPV*RGLAAF
Trigger: AAATGCAGCTAGGCCCCTGCACACAGGGCTTGCTGA...AATAGCTAATTTATTTCCCCAGGTGTGTGCTTTAGGCGTGGGCTGACCAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp ATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGGTCTTGCCAGCCTCCTaGTGGCAGACACTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: ITTMFHTALLGLIFSTWLVLPAS*WQTLLC
Trigger: GCAGAGAAGTGTCTGCCAGCAGGAGGCTGGCAAGAC...CAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACATGGTTGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp CTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGGCTCCCCACAAGTCATaGAAAGGTTTTGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LPYTNQKLSAQWATVLTRAPHKS*KGFEEL
Trigger: AAGCTCTTCAAAACCTTTGCATGACTTGTGGGGAGC...CCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp CAGGGTGAACAGAACATTTCATCTGCAACAGCTGAAGGCACAGCTTACCTATGCGTGTCAGCCTCCCTCTaGTTCAGAGAGTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: QGEQNISSATAEGTAYLCVSASL*FRESGE
Trigger: CTCACCTGACTCTCTGAAGCAGAGGGAGGCTGACAC...GCATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAAATGTTCTGTTCACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp ATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGGGCTGGCAGGTGTACTaGAAGCTGGCAAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: ITTMFHTALLGLIFSTWLGWQVY*KLANWQ
Trigger: CTGCCAGTTTGCCAGCTTCCAGTACACCTGCCAGCC...CAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACATGGTTGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp CTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAACAAACGGCTGTCTGCCAAGGCTGGCAGTCCCTCTaGTTGTCACAGATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LLPSNNYQSHVEQTAVCQGWQSL*LSQMVP
Trigger: TGGGACCATCTGTGACAACCAGAGGGACTGCCAGCC...TTGGCAGACAGCCGTTTGTTCTACATGGCTTTGATAATTGTTTGAGGGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGCGGCTGGCGGGGTCATaGCAAAGCTCGCCCTCCACG +
Preference number: 4 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKRLAGS*QSSPST
Trigger: CGTGGAGGGCGAGCTTTGCCATGACCCCGCCAGCCG...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp GACTCCACATTGTTTCCATCTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAGGCAGAGGAGGCCACTaGCACAAGGGCATCGGTCCA +
Preference number: 4 (lower is better)
Translates to: DSTLFPSPPLKQLSKPCRGRGGH*HKGIGP
Trigger: TGGACCGATGCCCTTGTGCCAGTGGCCTCCTCTGCC...TCTACATGGCTTTGATAATTGTTTGAGGGGAGGAGATGGAAACAATGTGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp ATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCCATCGGGGACCTCTCTaGGCAGCAGGATCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: MFHTALLGLIFSTWLIIVHRGPL*AAGSPH
Trigger: ATGGGGAGATCCTGCTGCCCAGAGAGGTCCCCGATG...GACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp TCTTCTCCACATTTCCCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATGGGGAGCACTTTTGGTaGCACCAAGGCTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SSPHFPKTNQRETPHCFHGEHFW*HQGWCG
Trigger: CCCACACCAGCCTTGGTGCCACCAAAAGTGCTCCCC...ATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGGGAAATGTGGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp TTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGACCCTCCCTCTGCCCATaGCCCAGAAAGCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LIFHECLKKFPSEVSAKGPSLCP*PRKPFP
Trigger: AGGAAAGGGCTTTCTGGGCCATGGGCAGAGGGAGGG...TCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGCTTGGCAGGAACTCTaGCTTTGGGAGAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFAWQEL*LWERAA
Trigger: TGCTGCTCTCTCCCAAAGCCAGAGTTCCTGCCAAGC...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AAGCCTGGTCAGCCCACGCCTAAAGCACACACCTGGGGAAATAAATTAGCTATTTCCCCTTACATTTCCTaGGTCATGGGGCCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: KPGQPTPKAHTWGNKLAISPYIS*VMGPAL
Trigger: TAGGGCTGGCCCCATGACCCAGGAAATGTAAGGGGA...AATAGCTAATTTATTTCCCCAGGTGTGTGCTTTAGGCGTGGGCTGACCAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp ATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGCTGCTGCTGCTGAGGTaGCCACTTTCAGCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: ITTMFHTALLGLIFSTWLLLLLR*PLSASP
Trigger: AGGGCTTGCTGAAAGTGGCCACCTCAGCAGCAGCAG...CAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACATGGTTGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp ACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTGGACAGGTTACCCACTGGGCAGTaGGCTTATCAAGTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: TNGCLPTGRGKAANNLDRLPTGQ*AYQVLS
Trigger: ACTGAGCACTTGATAAGCCCACTGCCCAGTGGGTAA...CCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp TCTTCTCCACATTTCCCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATCACAGTCCTCGTCGATaGTGCACTCGTGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSPHFPKTNQRETPHCFHHSPRR*CTRGSF
Trigger: GAAGGAGCCACGAGTGCATCATCGACGAGGACTGTG...ATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGGGAAATGTGGAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp AATTGGAAGATGCTTCTTGATTGTAGTTCCCATGGGGAAGAGGGAGGCTGTGATACAGCCTGGGGGAGCTaGACAAATGCACAACACCTC +
Preference number: 4 (lower is better)
Translates to: NWKMLLDCSSHGEEGGCDTAWGS*TNAQHL
Trigger: GAGGTGTTGTGCATTTGTTCAGCTCCCCCAGGCTGT...ATCACAGCCTCCCTCTTCCCCATGGGAACTACAATCAAGAAGCATCTTCCAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp CCTCCCCAGGCTGTGCTGAGAGAGGGAATTGATCTTGGATATGAAAATGCTGCCTTCATCTGCAACAGCTaGAGGCACAGCTTACCTATG +
Preference number: 4 (lower is better)
Translates to: PPQAVLREGIDLGYENAAFICNS*RHSLPM
Trigger: CATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAA...GGCAGCATTTTCATATCCAAGATCAATTCCCTCTCTCAGCACAGCCTGGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp CCTCCCCAGGCTGTGCTGAGAGAGGGAATTGATCTTGGATATGAAAATGCTGCCCACTTGCCACGCAGCTaGCTTCAATATAGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: PPQAVLREGIDLGYENAAHLPRS*LQYSSS
Trigger: AGAGCTACTATATTGAAGTCAGCTGCGTGGCAAGTG...GGCAGCATTTTCATATCCAAGATCAATTCCCTCTCTCAGCACAGCCTGGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp GGAAACTTACTGGGAAGAAGATGTAGGAAGAAGCCTGGTCAGCCCACGCCTAAACCAAATGTCGCTTCCTaGGCACCATACTCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: GNLLGRRCRKKPGQPTPKPNVAS*APYSKA
Trigger: TGCCTTTGAGTATGGTGCTCAGGAAGCGACATTTGG...TTTAGGCGTGGGCTGACCAGGCTTCTTCCTACATCTTCTTCCCAGTAAGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp CAACACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGCTCCCTCATGAAATTTaGCAGTGTCTTGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QHLMLSSQRGNLLGRRCRLPHEI*QCLASL
Trigger: GAGGCTGGCAAGACACTGTCAAATTTCATGAGGGAG...CCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp CCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATCTCCTCCCCTCAAACTCTGGGAAGATGCGATaGACTCATGTCCCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: PKTNQRETPHCFHLLPSNSGKMR*THVPVR
Trigger: TCTGACTGGGACATGAGTTCATCGCATCTTCCCAGA...GTTTGAGGGGAGGAGATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp GGAAACTTACTGGGAAGAAGATGTAGGAAGAAGCCTGGTCAGCCCACGCCTAAAACATGCAACAAATTGTaGCCCTGCTCCCCACAAGTC +
Preference number: 4 (lower is better)
Translates to: GNLLGRRCRKKPGQPTPKTCNKL*PCSPQV
Trigger: GACTTGTGGGGAGCAGGGTCACAATTTGTTGCATGT...TTTAGGCGTGGGCTGACCAGGCTTCTTCCTACATCTTCTTCCCAGTAAGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp TGTTTCTGCAGGTTAACCTGTATGCTACGCTCAGTCATATACCTTTCAAAGTTATGGACCGAGTTGCGCTaGGGGCCGGACTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: CFCRLTCMLRSVIYLSKLWTELR*GPDWIC
Trigger: GCAGATCCAGTCCGGCCCGCAGCGCAACTCGGTCCA...TAACTTTGAAAGGTATATGACTGAGCGTAGCATACAGGTTAACCTGCAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326932.8
CDS-3UTR GCA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTTGGTGGCCATTTTGGTaGAGTGACCCCAGACACACA +
Preference number: 4 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFWWPFW*SDPRHT
Trigger: TGTGTGTCTGGGGTCACTGCACCAAAATGGCCACCA...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp AAACCTTGCCTCACAGGTGGGCACCAAGCTCCCCTTCCCTCTGCTTTCCATGTTAGCCTCTTCTCTAAATaGTTCCTCAAGCTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: KPCLTGGHQAPLPSAFHVSLFSK*FLKLSL
Trigger: CAAGGAAAGCTTGAGGAAGCATTTAGAGAAGAGGCT...AACATGGAAAGCAGAGGGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp ACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTGGACAGGTGGGCTTTGTTCTCCTaGAGGCTATGGTTCATCATG +
Preference number: 4 (lower is better)
Translates to: TNGCLPTGRGKAANNLDRWALFS*RLWFIM
Trigger: CATGATGAACCATAGCCTGCAGGAGAACAAAGCCCA...CCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp ACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTGGACAGGTGGCAGACACTTCTCTaGAGTGAATACCACTATCCC +
Preference number: 4 (lower is better)
Translates to: TNGCLPTGRGKAANNLDRWQTLL*SEYHYP
Trigger: GGGATAGTGGTATTCACTGCAGAGAAGTGTCTGCCA...CCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp ACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTGGACAGGCCTTCGTGTCTGTGTTaGTCTCATTGTGATAGCTGG +
Preference number: 4 (lower is better)
Translates to: TNGCLPTGRGKAANNLDRPSCLC*SHCDSW
Trigger: CCAGCTATCACAATGAGACCAACACAGACACGAAGG...CCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp ACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGAAGATCGATGATGCACTCGTaGCTCCTTCTGCCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: TSCCQARGETYWEEDVGRSMMHS*LLLPSS
Trigger: CGAAGAAGGCAGAAGGAGCCACGAGTGCATCATCGA...TCTTCCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp ACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCTTCAGTTGCTGGAAGCTGGCAAACTaGCAGTACATGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: TALLGLIFSTWLIIVFSCWKLAN*QYMLGP
Trigger: TGGGCCCAGCATGTACTGCCAGTTTGCCAGCTTCCA...GCAACTGAAGACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp AGGTTAAGGACCTTGACGTGGGAAGATTATTCTGGATTATCTAGGTGGGCGCAATGGAAGCTGGCAAACTaGCAGTACATGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RLRTLTWEDYSGLSRWAQWKLAN*QYMLGP
Trigger: TGGGCCCAGCATGTACTGCCAGTTTGCCAGCTTCCA...TTGCGCCCACCTAGATAATCCAGAATAATCTTCCCACGTCAAGGTCCTTAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGAGGTGTACTGGAAGCTaGCAAACTGGCAGTACATGC +
Preference number: 4 (lower is better)
Translates to: SSVFAVAYYNHVSHSPARRCTGS*QTGSTC
Trigger: GCATGTACTGCCAGTTTGCCAGCTTCCAGTACACCT...CCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp ACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCTTCAGTTGCTCTGGTTGTCACAGATaGTCCCATTGCTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: TALLGLIFSTWLIIVFSCSGCHR*SHCCPW
Trigger: CCAGGGGCAGCAATGGGACCATCTGTGACAACCAGA...GCAACTGAAGACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp TCTTCTCCACATTTCCCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATAGGATCTCCCCATCTTaGTCACGGCTCCCCACGAAG +
Preference number: 4 (lower is better)
Translates to: SSPHFPKTNQRETPHCFHRISPS*SRLPTK
Trigger: CTTCGTGGGGAGCCGTGACCAAGATGGGGAGATCCT...ATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGGGAAATGTGGAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp GACTCCACATTGTTTCCATCTCCTCCCCTCAAACAATTATCAAAGCCATGTAGACCAGACTGTGAAGCCTaGAGAACAGCCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: DSTLFPSPPLKQLSKPCRPDCEA*RTAWGS
Trigger: GCTCCCCCAGGCTGTTCTCCAGGCTTCACAGTCTGG...TCTACATGGCTTTGATAATTGTTTGAGGGGAGGAGATGGAAACAATGTGGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp CCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATCTCCTCCCCTCAAACACTAGCTGTGTGACTTaGGCAAGCAGCTTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: PKTNQRETPHCFHLLPSNTSCVT*ASSLQS
Trigger: AGACTGCAAGCTGCTTGCCCAAGTCACACAGCTAGT...GTTTGAGGGGAGGAGATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp AGGTTAAGGACCTTGACGTGGGAAGATTATTCTGGATTATCTAGGTGGGCGCAAGCATCTGCCATGGCTTaGCAGGAACTCTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RLRTLTWEDYSGLSRWAQASAMA*QELWLW
Trigger: CCAAAGCCAGAGTTCCTGCCAAGCCATGGCAGATGC...TTGCGCCCACCTAGATAATCCAGAATAATCTTCCCACGTCAAGGTCCTTAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp TTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGACAGCTTGACTGGTGGTaGAAGAGGCCAGGAAGAGCG +
Preference number: 4 (lower is better)
Translates to: LIFHECLKKFPSEVSAKGQLDWW*KRPGRA
Trigger: CGCTCTTCCTGGCCTCTTCCACCACCAGTCAAGCTG...TCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp ACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTGGACAGGAATGCAGTTACCCACTaGGCAGTGGGCTTATCAAGT +
Preference number: 4 (lower is better)
Translates to: TNGCLPTGRGKAANNLDRNAVTH*AVGLSS
Trigger: ACTTGATAAGCCCACTGCCCAGTGGGTAACTGCATT...CCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AAGCCTGGTCAGCCCACGCCTAAAGCACACACCTGGGGAAATAAATTAGCTATTAGAGCCCTAGCGATGTaGATCAAGTTTCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: KPGQPTPKAHTWGNKLAIRALAM*IKFPEP
Trigger: GGGCTCAGGAAACTTGATCCACATCGCTAGGGCTCT...AATAGCTAATTTATTTCCCCAGGTGTGTGCTTTAGGCGTGGGCTGACCAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp CAACTGAGTGTCAGCTCACCAGGTCAGAAATTGTTATaGGACCCTAAAACCTTGCCTCACAGGTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: QLSVSSPGQKLL*DPKTLPHRWAP
Trigger: TGGTGCCCACCTGTGAGGCAAGGTTTTAGGGTCCAATAACAATTTCTGACCTGGTGAGCTGACACTCAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp AGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGAGAGTCACAACCAGATaGAACTGCTCTGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SSVFAVAYYNHVSHSPARRVTTR*NCSGLH
Trigger: GTGAAGACCAGAGCAGTTTCATCTGGTTGTGACTCT...CCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp CTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGTTGAATTGCATTTCTTaGGTATCTGGAGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: LPYTNQKLSAQWATVLTRLNCIS*VSGEDV
Trigger: CACATCCTCTCCAGATACTCAAGAAATGCAATTCAA...CCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp AAATGCTGCCCTGGCACAGAGGTAGGAGCTGAGCAACACTGCTGGATGAATAAAGACACTTCTCTGCAGTaGATACCACTATCCCATGCT +
Preference number: 4 (lower is better)
Translates to: KCCPGTEVGAEQHCWMNKDTSLQ*IPLSHA
Trigger: AGCATGGGATAGTGGTATTCACTGCAGAGAAGTGTC...TTTATTCATCCAGCAGTGTTGCTCAGCTCCTACCTCTGTGCCAGGGCAGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp CTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAACAAACGGCTGTCTGCCAACATTCAAAGCTCCCCTaGACCTCCATAGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLPSNNYQSHVEQTAVCQHSKLP*TSIVPP
Trigger: TGGAGGCACTATGGAGGTTCAGGGGAGCTTTGAATG...TTGGCAGACAGCCGTTTGTTCTACATGGCTTTGATAATTGTTTGAGGGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp CCTCCCCAGGCTGTGCTGAGAGAGGGAATTGATCTTGGATATGAAAATGCTGCCGATAAGAACAGTGTGTaGAGCAGCCTTCACACTAGA +
Preference number: 4 (lower is better)
Translates to: PPQAVLREGIDLGYENAADKNSV*SSLHTR
Trigger: TCTAGTGTGAAGGCTGCTTCACACACTGTTCTTATC...GGCAGCATTTTCATATCCAAGATCAATTCCCTCTCTCAGCACAGCCTGGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp TTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGAGCGCTGCGCAATTTGTaGTGCGTGTCCTCCATCAGT +
Preference number: 4 (lower is better)
Translates to: LIFHECLKKFPSEVSAKGALRNL*CVSSIS
Trigger: ACTGATGGAGGACACGCAGCACAAATTGCGCAGCGC...TCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp CAGGGTGAACAGAACATTTCATCTGCAACAGCTGAAGGCACAGCTTACCTATGCATGCACAACACCTCATaGTGTCAAGCCAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: QGEQNISSATAEGTAYLCMHNTS*CQARGE
Trigger: TTCCCCTCTGGCTTGACAGCATGAGGTGTTGTGCAT...GCATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAAATGTTCTGTTCACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp ACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCTTCAGTTGCGTGGCAAACTGCTCCTaGAGTTTAACCCTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: TALLGLIFSTWLIIVFSCVANCS*SLTLPD
Trigger: GTCAGGCAGGGTTAAACTGCAGGAGCAGTTTGCCAC...GCAACTGAAGACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGGCACAGCTTACCTATaGCCATGGAAAGAACTGCGT +
Preference number: 4 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFGTAYL*PWKELR
Trigger: ACGCAGTTCTTTCCATGGGCATAGGTAAGCTGTGCC...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp ATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCAAGAGCCAGTTCCCATaGCAGCTCTCCCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: MFHTALLGLIFSTWLIIVKSQFP*QLSPSA
Trigger: AGCACTTGGGGAGAGCTGGCATGGGAACTGGCTCTT...GACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGTCCTCAAGCTTTCCTTaGCTTCCAGCCACTGCAAAT +
Preference number: 4 (lower is better)
Translates to: RKPESWHLRRTELSLQDLSSSFP*LPATAN
Trigger: ATTTGCAGTGGCTGGAAGGCAAGGAAAGCTTGAGGA...CAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGAAGGAGACACTCAGATaGTACTCAGATGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SSVFAVAYYNHVSHSPARKETLR*YSDAGF
Trigger: GAAGCCAGCATCTGAGTAGCATCTGAGTGTCTCCTT...CCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AAACCTTGCCTCACAGGTGGGCACCAAGCTCCCCTTCCCTCTGCTTTCCATGTTGGCAGCTCAGATTGCTaGAGTGTTGTAATTATAACT +
Preference number: 4 (lower is better)
Translates to: KPCLTGGHQAPLPSAFHVGSSDC*SVVIIT
Trigger: AGTTATAATTACAACACTGCAGCAATCTGAGCTGCC...AACATGGAAAGCAGAGGGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGCCTTCGTGTCTGTGTTaGTCTCATTGTGATAGCTGG +
Preference number: 4 (lower is better)
Translates to: SSVFAVAYYNHVSHSPARPSCLC*SHCDSW
Trigger: CCAGCTATCACAATGAGACCAACACAGACACGAAGG...CCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACAGGCTGGCAGGTGTACTaGAAGCTGGCAAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITGWQVY*KLANWQ
Trigger: CTGCCAGTTTGCCAGCTTCCAGTACACCTGCCAGCC...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp ACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTGGACAGGGCTTACCTATGCCCATaGAAAGAACTGCGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: TNGCLPTGRGKAANNLDRAYLCP*KELRGK
Trigger: TTTTCCACGCAGTTCTTTCCATGGGCATAGGTAAGC...CCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACATGGTGGCACCAAGGCTaGTGTGGGGTAGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITWWHQG*CGVVER
Trigger: TCTCTCCACTACCCCACACCAGCCTTGGTGCCACCA...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGAGCCCCTACCTGGGGTaGACCAAGCACAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKSPYLG*TKHRSA
Trigger: GGCTGACCTGTGCTTGGTCCACCCCAGGTAGGGGCT...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp TTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGACTATCTGGGTCAGCTTaGCACCCCAAAGCGTACCAC +
Preference number: 4 (lower is better)
Translates to: LIFHECLKKFPSEVSAKGLSGSA*HPKAYH
Trigger: GTGGTACGCTTTGGGGTGCCAAGCTGACCCAGATAG...TCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp GTAGAGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCGGTGTCCAGAGATGGTaGAGAACAGGATTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: VEFSVRSRILQPCFTQPCGVQRW*RTGLVS
Trigger: GGAAACCAATCCTGTTCTCCACCATCTCTGGACACC...GCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp TTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGATTGGCCGGACATGGTTaGGGTAACCCAGTGACACCA +
Preference number: 4 (lower is better)
Translates to: LIFHECLKKFPSEVSAKGLAGHG*GNPVTP
Trigger: TGGTGTCACTGGGTTACCCCAACCATGTCCGGCCAA...TCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp TGTTCCCACATCGGGTTGACTGTCTTTGTTTTGTCATaGCTTGCTCTGGCTGTGTCTCCCTCATTAGACTGG +
Preference number: 4 (lower is better)
Translates to: CSHIGLTVFVLS*LALAVSPSLDW
Trigger: CCAGTCTAATGAGGGAGACACAGCCAGAGCAAGCAATGACAAAACAAAGACAGTCAACCCGATGTGGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp CACCTCTGTTCCCACATCGGGTTGACTGTCTTTGTTTaGTCATTGCTTGCTCTGGCTGTGTCTCCCTCATTA +
Preference number: 4 (lower is better)
Translates to: HLCSHIGLTVFV*SLLALAVSPSL
Trigger: TAATGAGGGAGACACAGCCAGAGCAAGCAATGACAAAACAAAGACAGTCAACCCGATGTGGGAACAGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp ACACCACAATCTCCCAAAAGGGGATTTCACCCTCCCTaGGTCATCTTTATACAGGGCAATTGTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TPQSPKRGFHPP*VIFIQGNCAAA
Trigger: AGCAGCAGCACAATTGCCCTGTATAAAGATGACCAAGGGAGGGTGAAATCCCCTTTTGGGAGATTGTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp TTTCCACCTCCTCACCAGCTCACCTGTACAAGAGAATaGATCTCAACTGAGTGTCAGCTCACCAGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: FPPPHQLTCTRE*ISTECQLTRSE
Trigger: TTCTGACCTGGTGAGCTGACACTCAGTTGAGATCAATTCTCTTGTACAGGTGAGCTGGTGAGGAGGTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp CTGGAACATCAGAACGTTTCCCTTAGACCGATCCCAGCAGGTGGCAGCTCAGATTGTGATAACTGTCTCTaGAAAGACCATTTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LEHQNVSLRPIPAGGSSDCDNCL*KDHLSS
Trigger: ACTGGACAAATGGTCTTTTCAGAGACAGTTATCACA...ATCTGAGCTGCCACCTGCTGGGATCGGTCTAAGGGAAACGTTCTGATGTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACAGGCGCACCTCCTCCATaGAGCTGCCAACTTCATACT +
Preference number: 4 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITGAPPP*SCQLHT
Trigger: AGTATGAAGTTGGCAGCTTCATGGAGGAGGTGCGCC...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGCATTTTTGCCAGGTTaGTGTTTGCAAAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFAFLPG*CLQSRA
Trigger: TGCCCTGCTTTGCAAACATCAACCTGGCAAAAATGC...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTTTCATCTGCAACAGCTaGAGGCACAGCTTACCTATG +
Preference number: 4 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFFICNS*RHSLPM
Trigger: CATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAA...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp CAACACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGGGTGGCAACAGTCCATaGCACCTGAAAACATCATTT +
Preference number: 4 (lower is better)
Translates to: QHLMLSSQRGNLLGRRCRGGNSP*HLKTSF
Trigger: AAATGATGTTTTCAGGTGTCATGGACTGTTGCCACC...CCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp AACATTTTGGTCACTAGTAGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGCGGCGGGCACTCAAGGTaGGGGGTGCATTCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: NILVTSSQNLIRPYVLKGGGHSR*GVHSGQ
Trigger: TTGGCCAGAATGCACCCCTCACCTTGAGTGCCCGCC...GCCTTTCAGGACATATGGCCTTATAAGATTTTGACTACTAGTGACCAAAATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp CAGGGTGAACAGAACATTTCATCTGCAACAGCTGAAGGCACAGCTTACCTATGCAATGGGCCACTGTTTTaGCTCGGAATCATGTTGTGC +
Preference number: 4 (lower is better)
Translates to: QGEQNISSATAEGTAYLCNGPLF*LGIMLC
Trigger: GCACAACATGATTCCGAGTCAAAACAGTGGCCCATT...GCATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAAATGTTCTGTTCACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AATTGGAAGATGCTTCTTGATTGTAGTTCCCATGGGGAAGAGGGAGGCTGTGATATGCACAACACCTCATaGTGTCAAGCCAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: NWKMLLDCSSHGEEGGCDMHNTS*CQARGE
Trigger: TTCCCCTCTGGCTTGACAGCATGAGGTGTTGTGCAT...ATCACAGCCTCCCTCTTCCCCATGGGAACTACAATCAAGAAGCATCTTCCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp ACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCTTCAGTTGCGGGGAGCTGAACAAATaGACAACACCTCATGCTGTC +
Preference number: 4 (lower is better)
Translates to: TALLGLIFSTWLIIVFSCGELNK*TTPHAV
Trigger: GACAGCATGAGGTGTTGTGCATTTGTTCAGCTCCCC...GCAACTGAAGACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp CTGGAACATCAGAACGTTTCCCTTAGACCGATCCCAGCAGGTGGCAGCTCAGATCTCTGTCAATCTCTTTaGACCTCCATTTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: LEHQNVSLRPIPAGGSSDLCQSL*TSICSS
Trigger: AGATGAACAAATGGAGGTGCAAAGAGATTGACAGAG...ATCTGAGCTGCCACCTGCTGGGATCGGTCTAAGGGAAACGTTCTGATGTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AGGTTAAGGACCTTGACGTGGGAAGATTATTCTGGATTATCTAGGTGGGCGCAACTCATTAGACTGGGATaGCTTCAAGGTAGGGACCCT +
Preference number: 4 (lower is better)
Translates to: RLRTLTWEDYSGLSRWAQLIRLG*LQGRDP
Trigger: AGGGTCCCTACCTTGAAGGCATCCCAGTCTAATGAG...TTGCGCCCACCTAGATAATCCAGAATAATCTTCCCACGTCAAGGTCCTTAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp CAGGGTGAACAGAACATTTCATCTGCAACAGCTGAAGGCACAGCTTACCTATGCTGTTTTGTCATTGCTTaGTCTGGCTGTGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QGEQNISSATAEGTAYLCCFVIA*SGCVSL
Trigger: GAGGGAGACACAGCCAGAGCAAGCAATGACAAAACA...GCATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAAATGTTCTGTTCACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp TCTTCTCCACATTTCCCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATGAGCCTCCAGAGGAATaGAGCCCTGTTGATCACATG +
Preference number: 4 (lower is better)
Translates to: SSPHFPKTNQRETPHCFHEPPEE*SPVDHM
Trigger: CATGTGATCAACAGGGCTGCATTCCTCTGGAGGCTC...ATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGGGAAATGTGGAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp CAACACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGAATACCACTATCCCATaGTGCACTAGTCCCTACCAA +
Preference number: 4 (lower is better)
Translates to: QHLMLSSQRGNLLGRRCRNTTIP*CTSPYQ
Trigger: TTGGTAGGGACTAGTGCAGCATGGGATAGTGGTATT...CCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp ACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTGGACAGGGAAATAAGCATTGGTTaGCAGGCCACAGTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: TNGCLPTGRGKAANNLDREISIG*QATVRN
Trigger: ATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTC...CCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp GGAAACTTACTGGGAAGAAGATGTAGGAAGAAGCCTGGTCAGCCCACGCCTAAACTCGGTGCACATGGATaGTATTATTTCCAACCTTCG +
Preference number: 4 (lower is better)
Translates to: GNLLGRRCRKKPGQPTPKLGAHG*YYFQPS
Trigger: CGAAGGTTGGAAATAATACCATCCATGTGCACCGAG...TTTAGGCGTGGGCTGACCAGGCTTCTTCCTACATCTTCTTCCCAGTAAGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGCATCGGGGACCTCTCTaGGCAGCAGGATCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKHRGPL*AAGSPH
Trigger: ATGGGGAGATCCTGCTGCCCAGAGAGGTCCCCGATG...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp AGCCATGTAGAACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATACTCTGGATGAATACATaGTGGCAACAGTCCATGACA +
Preference number: 4 (lower is better)
Translates to: SHVEQTAVCQLVEAKQPILWMNT*WQQSMT
Trigger: TGTCATGGACTGTTGCCACCATGTATTCATCCAGAG...TATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGTTCTACATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp AGCCATGTAGAACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAAAATTCCAGAAACTCTaGGAGCCCTCCCCTTACATT +
Preference number: 4 (lower is better)
Translates to: SHVEQTAVCQLVEAKQPIKFQKL*EPSPYI
Trigger: AATGTAAGGGGAGGGCTCCCAGAGTTTCTGGAATTT...TATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGTTCTACATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp ATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCAAGCTCAGTGCCCAATaGGCCACTGTTTTGACTCGG +
Preference number: 4 (lower is better)
Translates to: MFHTALLGLIFSTWLIIVKLSAQ*ATVLTR
Trigger: CCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTT...GACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp ATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGGACACCAGCACTGATTaGACTGCCCTACACCAATCA +
Preference number: 4 (lower is better)
Translates to: ITTMFHTALLGLIFSTWLDTSTD*TALHQS
Trigger: TGATTGGTGTAGGGCAGTCCAATCAGTGCTGGTGTC...CAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACATGGTTGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACGCATTTTTGCCAGGTTaGTGTTTGCAAAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENAFLPG*CLQSRA
Trigger: TGCCCTGCTTTGCAAACATCAACCTGGCAAAAATGC...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp AGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGACATGTAATGCAGGGTaGACAGAACATTTCATCTGC +
Preference number: 4 (lower is better)
Translates to: SSVFAVAYYNHVSHSPARTCNAG*TEHFIC
Trigger: GCAGATGAAATGTTCTGTTCACCCTGCATTACATGT...CCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACAGAGTCACAACCAGATaGAACTGCTCTGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENRVTTR*NCSGLH
Trigger: GTGAAGACCAGAGCAGTTTCATCTGGTTGTGACTCT...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp GTAGAGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCGGTGGCAACAGTCCATaGCACCTGAAAACATCATTT +
Preference number: 4 (lower is better)
Translates to: VEFSVRSRILQPCFTQPCGGNSP*HLKTSF
Trigger: AAATGATGTTTTCAGGTGTCATGGACTGTTGCCACC...GCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACAGTTGAGCAGTTTACCTaGCGGCATCTGCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITVEQFT*RHLPWL
Trigger: AAGCCATGGCAGATGCCGTCAGGTAAACTGCTCAAC...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp TCTTCTCCACATTTCCCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATACTGAGAACAGCTGTTaGGCAGTTTACCTGACGGCA +
Preference number: 4 (lower is better)
Translates to: SSPHFPKTNQRETPHCFHTENSC*AVYLTA
Trigger: TGCCGTCAGGTAAACTGCTCAACAGCTGTTCTCAGT...ATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGGGAAATGTGGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp GTAGAGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCAAATGTAATCCTCAGTaGGGTTCCTCAGTGCTAGGT +
Preference number: 4 (lower is better)
Translates to: VEFSVRSRILQPCFTQPCKCNPQ*GSSVLG
Trigger: ACCTAGCACTGAGGAACCTCACTGAGGATTACATTT...GCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp GACTCCACATTGTTTCCATCTCCTCCCCTCAAACAATTATCAAAGCCATGTAGACTGCGCAATTTGTGCTaGGTGTCCTCCATCAGTTCC +
Preference number: 4 (lower is better)
Translates to: DSTLFPSPPLKQLSKPCRLRNLC*VSSISS
Trigger: GGAACTGATGGAGGACACGCAGCACAAATTGCGCAG...TCTACATGGCTTTGATAATTGTTTGAGGGGAGGAGATGGAAACAATGTGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGGAGCTGAGCAACACTaGTGGATGAATAAACACATG +
Preference number: 4 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFGAEQH*WMNKHM
Trigger: CATGTGTTTATTCATCCAGCAGTGTTGCTCAGCTCC...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTATGCTGAAAGAGGTGTaGTTCAGTTGGGTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFMLKEV*FSWVAN
Trigger: ATTTGCCACCCAACTGAAGCACACCTCTTTCAGCAT...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AAACCTTGCCTCACAGGTGGGCACCAAGCTCCCCTTCCCTCTGCTTTCCATGTTACATACTGTACTAGATaGTGTTTTTGTCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: KPCLTGGHQAPLPSAFHVTYCTR*CFCLTS
Trigger: AGAAGTCAGACAAAAACAGCATCTAGTACAGTATGT...AACATGGAAAGCAGAGGGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp CCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATCTCCTCCCCTCAAACCAGATGCTACTCAGATaGTGGCTTCAGCTAAGTATT +
Preference number: 4 (lower is better)
Translates to: PKTNQRETPHCFHLLPSNQMLLR*WLQLSI
Trigger: AATACTTAGCTGAAGCCAGCATCTGAGTAGCATCTG...GTTTGAGGGGAGGAGATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp CAGGGTGAACAGAACATTTCATCTGCAACAGCTGAAGGCACAGCTTACCTATGCGTTACTGTCCCCTTGTaGCTGGTCACTAGTAACTTT +
Preference number: 4 (lower is better)
Translates to: QGEQNISSATAEGTAYLCVTVPL*LVTSNF
Trigger: AAAGTTACTAGTGACCAGGCACAAGGGGACAGTAAC...GCATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAAATGTTCTGTTCACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACATGGACCCTAAAACCTTaGCTCACAGGTGGGCACCAA +
Preference number: 4 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITWTLKP*LTGGHQ
Trigger: TTGGTGCCCACCTGTGAGGCAAGGTTTTAGGGTCCA...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACATTGAGAGGAATGCTCTaGCCCTTCCCCATCACAGCA +
Preference number: 4 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITLRGML*PFPITA
Trigger: TGCTGTGATGGGGAAGGGGCAGAGCATTCCTCTCAA...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp CCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATCTCCTCCCCTCAAACAAAATTCTGGGAAGATaGGATGAACTCATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PKTNQRETPHCFHLLPSNKILGR*DELMSQ
Trigger: CTGGGACATGAGTTCATCGCATCTTCCCAGAATTTT...GTTTGAGGGGAGGAGATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AAGCCTGGTCAGCCCACGCCTAAAGCACACACCTGGGGAAATAAATTAGCTATTCTCGGTGCACATGGATaGTATTATTTCCAACCTTCG +
Preference number: 4 (lower is better)
Translates to: KPGQPTPKAHTWGNKLAILGAHG*YYFQPS
Trigger: CGAAGGTTGGAAATAATACCATCCATGTGCACCGAG...AATAGCTAATTTATTTCCCCAGGTGTGTGCTTTAGGCGTGGGCTGACCAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp ATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCACTAGCTGTGTGACTTaGGCAAGCAGCTTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: MFHTALLGLIFSTWLIIVTSCVT*ASSLQS
Trigger: AGACTGCAAGCTGCTTGCCCAAGTCACACAGCTAGT...GACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp CTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAACAAACGGCTGTCTGCCAACATTCTCCTTCCTTTTaGGGAGCACTTTTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LLPSNNYQSHVEQTAVCQHSPSF*GALLVA
Trigger: TGCCACCAAAAGTGCTCCCCAAAAGGAAGGAGAATG...TTGGCAGACAGCCGTTTGTTCTACATGGCTTTGATAATTGTTTGAGGGGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp AGGTTAAGGACCTTGACGTGGGAAGATTATTCTGGATTATCTAGGTGGGCGCAACATTCTCCTTCCTTTTaGGGAGCACTTTTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RLRTLTWEDYSGLSRWAQHSPSF*GALLVA
Trigger: TGCCACCAAAAGTGCTCCCCAAAAGGAAGGAGAATG...TTGCGCCCACCTAGATAATCCAGAATAATCTTCCCACGTCAAGGTCCTTAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTACATCATTTGTGGAGTaGCGTAGAGTTCAGTGTTCG +
Preference number: 4 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFTSFVE*RRVQCS
Trigger: CGAACACTGAACTCTACGCCACTCCACAAATGATGT...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGCTGCACCAGCTTGACTaGTGGTGGAAGAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKLHQLD*WWKRPG
Trigger: TCCTGGCCTCTTCCACCACCAGTCAAGCTGGTGCAG...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp GAAGGCCGTGAAGCATTTACACTCTTTAAGACAAATTCCCATCCAAAAATAGTTACCTTGCCTCACAGGTaGGCACCAAGCTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: EGREAFTLFKTNSHPKIVTLPHR*APSSPS
Trigger: GGAAGGGGAGCTTGGTGCCCACCTGTGAGGCAAGGT...AACTATTTTTGGATGGGAATTTGTCTTAAAGAGTGTAAATGCTTCACGGCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp CCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATCTCCTCCCCTCAAACACGTGTGTTGACTCTTaGAAAGCAGCAAAAACAGGA +
Preference number: 4 (lower is better)
Translates to: PKTNQRETPHCFHLLPSNTCVDS*KAAKTG
Trigger: TCCTGTTTTTGCTGCTTTCCAAGAGTCAACACACGT...GTTTGAGGGGAGGAGATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp GGGAAGATTATTCTGGATTATCTAGGTGGGCGCAATTaGATCACATGGGTCCCCAGAAGTGGAGAACCTTTC +
Preference number: 4 (lower is better)
Translates to: GKIILDYLGGRN*ITWVPRSGEPF
Trigger: GAAAGGTTCTCCACTTCTGGGGACCCATGTGATCAAATTGCGCCCACCTAGATAATCCAGAATAATCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp TCCTCAGTGCTAGGTCCCATAGGATTGTCGTTGCCCTaGTTAATGAGGTTTCTCTGTTCAGCGGCTTCAATT +
Preference number: 4 (lower is better)
Translates to: SSVLGPIGLSLP*LMRFLCSAASI
Trigger: AATTGAAGCCGCTGAACAGAGAAACCTCATTAACAAGGGCAACGACAATCCTATGGGACCTAGCACTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp AGCCATGTAGAACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATATGTGATAACTGTCTCTaGAAAGACCATTTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SHVEQTAVCQLVEAKQPICDNCL*KDHLSS
Trigger: ACTGGACAAATGGTCTTTTCAGAGACAGTTATCACA...TATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGTTCTACATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp AACATTTTGGTCACTAGTAGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGCCACAGTCCTCGTCGATaGTGCACTCGTGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: NILVTSSQNLIRPYVLKGHSPRR*CTRGSF
Trigger: GAAGGAGCCACGAGTGCATCATCGACGAGGACTGTG...GCCTTTCAGGACATATGGCCTTATAAGATTTTGACTACTAGTGACCAAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGGGCGCACCTCCTCCATaGAGCTGCCAACTTCATACT +
Preference number: 4 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKGAPPP*SCQLHT
Trigger: AGTATGAAGTTGGCAGCTTCATGGAGGAGGTGCGCC...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp CAGGGTGAACAGAACATTTCATCTGCAACAGCTGAAGGCACAGCTTACCTATGCACATGTAATGCAGGGTaGACAGAACATTTCATCTGC +
Preference number: 4 (lower is better)
Translates to: QGEQNISSATAEGTAYLCTCNAG*TEHFIC
Trigger: GCAGATGAAATGTTCTGTTCACCCTGCATTACATGT...GCATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAAATGTTCTGTTCACCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACAGTTTGTGGCTATCATaGCAAAATGGAGCAGCCTAC +
Preference number: 4 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENSLWLS*QNGAAY
Trigger: GTAGGCTGCTCCATTTTGTCATGATAGCCACAAACT...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACCATTTCACTCAGGACTaGGTAAAGGAGACACTCAGA +
Preference number: 4 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENHFTQD*VKETLR
Trigger: TCTGAGTGTCTCCTTTACTCAGTCCTGAGTGAAATG...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp TCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGTGATAAGCTGCTGGAGGGACTaGGAACAGCTGTTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SNEISIGCQATVRNCIVISCWRD*EQLLSS
Trigger: ACTGCTCAACAGCTGTTCTCAGTCCCTCCAGCAGCT...TATCACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp GGAAACTTACTGGGAAGAAGATGTAGGAAGAAGCCTGGTCAGCCCACGCCTAAAGTAGGACAGTTTTTATaGGGGTTTCAAAGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: GNLLGRRCRKKPGQPTPKVGQFL*GFQRSS
Trigger: TGAACTCCTTTGAAACCCTCATAAAAACTGTCCTAC...TTTAGGCGTGGGCTGACCAGGCTTCTTCCTACATCTTCTTCCCAGTAAGTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp AGCCATGTAGAACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATATCTGCTTTAAAGGACTaGCTTGCTATCACACAAAAG +
Preference number: 4 (lower is better)
Translates to: SHVEQTAVCQLVEAKQPISALKD*LAITQK
Trigger: CTTTTGTGTGATAGCAAGTCAGTCCTTTAAAGCAGA...TATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGTTCTACATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AAATGCTGCCCTGGCACAGAGGTAGGAGCTGAGCAACACTGCTGGATGAATAAAATTAGCTATTTCTATTaGACATCTACCCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: KCCPGTEVGAEQHCWMNKISYFY*TSTHSL
Trigger: CAGGCTGTGGGTAGATGTGCAATAGAAATAGCTAAT...TTTATTCATCCAGCAGTGTTGCTCAGCTCCTACCTCTGTGCCAGGGCAGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp GACTCCACATTGTTTCCATCTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAGGGGAGCTGAACAAATaGACAACACCTCATGCTGTC +
Preference number: 4 (lower is better)
Translates to: DSTLFPSPPLKQLSKPCRGELNK*TTPHAV
Trigger: GACAGCATGAGGTGTTGTGCATTTGTTCAGCTCCCC...TCTACATGGCTTTGATAATTGTTTGAGGGGAGGAGATGGAAACAATGTGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACAAATTTGACAGTGTCTTaGCAGCCTCCTGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITNLTVS*QPPAGR
Trigger: TCTGCCAGCAGGAGGCTGGCAAGACACTGTCAAATT...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp TATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGAGAGTGCCTCCAAGATGTaGTGTCCCTGCCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: YATLSHIPFKVTNATAKESASKM*CPCQLL
Trigger: CAGGAGTTGGCAGGGACAGCACATCTTGGAGGCACT...CTCTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp ACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTGGACAGGTTATCAAGTGCTCAGTaGAATCCTGTGACTTTTAAG +
Preference number: 4 (lower is better)
Translates to: TNGCLPTGRGKAANNLDRLSSAQ*NPVTFK
Trigger: CTTAAAAGTCACAGGATTGCACTGAGCACTTGATAA...CCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp TCTTCTCCACATTTCCCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATCAATCAGAAGCTCAGTaGCCAATGGGCCACTGTTTT +
Preference number: 4 (lower is better)
Translates to: SSPHFPKTNQRETPHCFHQSEAQ*PMGHCF
Trigger: AAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTG...ATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGGGAAATGTGGAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACTCTCATTGTGATAGCTaGGAGGTAAGTTTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENSHCDS*EVSLPG
Trigger: ACCTGGCAAACTTACCTCCCAGCTATCACAATGAGA...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp AGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGGTCCAGTCTGGTTGTTaGTTATCTTGTGAATTTCTC +
Preference number: 4 (lower is better)
Translates to: RKPESWHLRRTELSLQDLVQSGC*LSCEFL
Trigger: GAGAAATTCACAAGATAACCAACAACCAGACTGGAC...CAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACAAAGCAGCCAATAATCTaGACAGGGGTGGCAAACTGC +
Preference number: 4 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITKQPII*TGVANC
Trigger: GCAGTTTGCCACCCCTGTCCAGATTATTGGCTGCTT...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACGCTTACCTATGCCCATaGAAAGAACTGCGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENAYLCP*KELRGK
Trigger: TTTTCCACGCAGTTCTTTCCATGGGCATAGGTAAGC...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp AACATTTTGGTCACTAGTAGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGCGCACCAAGGCTGGTGTaGGGTAGTGGAGAGAGCACT +
Preference number: 4 (lower is better)
Translates to: NILVTSSQNLIRPYVLKGAPRLV*GSGEST
Trigger: AGTGCTCTCTCCACTACCCCACACCAGCCTTGGTGC...GCCTTTCAGGACATATGGCCTTATAAGATTTTGACTACTAGTGACCAAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp CTGGAACATCAGAACGTTTCCCTTAGACCGATCCCAGCAGGTGGCAGCTCAGATTTGATTTTCTCCACGTaGTTGATAATTGTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LEHQNVSLRPIPAGGSSDLIFST*LIIVFS
Trigger: ACTGAAGACAATTATCAACCACGTGGAGAAAATCAA...ATCTGAGCTGCCACCTGCTGGGATCGGTCTAAGGGAAACGTTCTGATGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACTGGATGAATACATGGTaGCAACAGTCCATGACACCT +
Preference number: 4 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENWMNTW*QQSMTP
Trigger: AGGTGTCATGGACTGTTGCCACCATGTATTCATCCA...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGGCAGTTTCCCCTACATaGCACCTGACCCTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKAVSPT*HLTLVP
Trigger: AGGCACAAGGGTCAGGTGCCATGTAGGGGAAACTGC...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp ACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTGGACAGGTTAAGGACCTTGACGTaGGAAGATTATTCTGGATTA +
Preference number: 4 (lower is better)
Translates to: TNGCLPTGRGKAANNLDRLRTLT*EDYSGL
Trigger: TAATCCAGAATAATCTTCCCACGTCAAGGTCCTTAA...CCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp CCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATCTCCTCCCCTCAAACGTCAGAAATTGTTATTaGACCCTAAAACCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: PKTNQRETPHCFHLLPSNVRNCY*TLKPCL
Trigger: GAGGCAAGGTTTTAGGGTCCAATAACAATTTCTGAC...GTTTGAGGGGAGGAGATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp ACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCTTCAGTTGCAAGAAACAAAAGCTGTaGTTTCAGGACCATGCCGTG +
Preference number: 4 (lower is better)
Translates to: TALLGLIFSTWLIIVFSCKKQKL*FQDHAV
Trigger: CACGGCATGGTCCTGAAACCACAGCTTTTGTTTCTT...GCAACTGAAGACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTGGTCTGATTGGGTTTaGTTTAGTATTCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: SSVFAVAYYNHVSHSPARWSDWV*FSIPMS
Trigger: GCTCATAGGAATACTAAACCAAACCCAATCAGACCA...CCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp GACTCCACATTGTTTCCATCTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAATGGTTCACTACCACTaGGTAGTGCCATTTTGGCCG +
Preference number: 4 (lower is better)
Translates to: DSTLFPSPPLKQLSKPCRMVHYH*VVPFWP
Trigger: CGGCCAAAATGGCACTACCCAGTGGTAGTGAACCAT...TCTACATGGCTTTGATAATTGTTTGAGGGGAGGAGATGGAAACAATGTGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp CCTAGGTTTAGTGTACATGAAATTGGAAGATGCTTCTaGATTGTAGTTCCCATGGGGAAGAGGGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PRFSVHEIGRCF*IVVPMGKREAV
Trigger: CACAGCCTCCCTCTTCCCCATGGGAACTACAATCAAGAAGCATCTTCCAATTTCATGTACACTAAACCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp ACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTaGACTCGGAATCATGTTGTGCACTATAGTCAAATG +
Preference number: 4 (lower is better)
Translates to: TNQKLSAQWATV*TRNHVVHYSQM
Trigger: CATTTGACTATAGTGCACAACATGATTCCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTAGCAACACTGCTGGATaGATAAACACATGTAATGCA +
Preference number: 4 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFSNTAG*INTCNA
Trigger: TGCATTACATGTGTTTATTCATCCAGCAGTGTTGCT...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp TTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGAGTTCCCACATCGGGTTaGCTGTCTTTGTTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LIFHECLKKFPSEVSAKGVPTSG*LSLFCH
Trigger: ATGACAAAACAAAGACAGTCAACCCGATGTGGGAAC...TCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp GAAGGCCGTGAAGCATTTACACTCTTTAAGACAAATTCCCATCCAAAAATAGTTTTGTGCTGCTGCTGCTaGGGTGGCCACTTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: EGREAFTLFKTNSHPKIVLCCCC*GGHFQQ
Trigger: TTGCTGAAAGTGGCCACCTCAGCAGCAGCAGCACAA...AACTATTTTTGGATGGGAATTTGTCTTAAAGAGTGTAAATGCTTCACGGCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp AAGCCTGGTCAGCCCACGCCTAAAGCACACACCTGGGGAAATAAATTAGCTATTCAATTTGATCTTCCATaGGTGTCTCAAAAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: KPGQPTPKAHTWGNKLAIQFDLP*VSQKVP
Trigger: GGGAACTTTTTGAGACACTCATGGAAGATCAAATTG...AATAGCTAATTTATTTCCCCAGGTGTGTGCTTTAGGCGTGGGCTGACCAGGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp TTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGAATTGGTGCTCCCTCATaGAATTTGACAGTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: LIFHECLKKFPSEVSAKGIGAPS*NLTVSC
Trigger: GCAAGACACTGTCAAATTTCATGAGGGAGCACCAAT...TCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp TGTTTCTGCAGGTTAACCTGTATGCTACGCTCAGTCATATACCTTTCAAAGTTAAGGGCAAAAGAGAGTTaGGAGGAATGCTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: CFCRLTCMLRSVIYLSKLRAKES*EECSAP
Trigger: AGGGGCAGAGCATTCCTCTCAACTCTCTTTTGCCCT...TAACTTTGAAAGGTATATGACTGAGCGTAGCATACAGGTTAACCTGCAGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp GACTCCACATTGTTTCCATCTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAACAGCTGTTTGGTTCTaGTACAGGCCTGCTTACTTG +
Preference number: 4 (lower is better)
Translates to: DSTLFPSPPLKQLSKPCRTAVWF*YRPAYL
Trigger: CAAGTAAGCAGGCCTGTATCAGAACCAAACAGCTGT...TCTACATGGCTTTGATAATTGTTTGAGGGGAGGAGATGGAAACAATGTGGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp GGAAACTTACTGGGAAGAAGATGTAGGAAGAAGCCTGGTCAGCCCACGCCTAAACTGATGCAGTCAACATaGTTTCATTGCAGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: GNLLGRRCRKKPGQPTPKLMQST*FHCRVY
Trigger: ATAAACTCTGCAATGAAATCATGTTGACTGCATCAG...TTTAGGCGTGGGCTGACCAGGCTTCTTCCTACATCTTCTTCCCAGTAAGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp TTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGAGGTCATGGTACAGACTaGTGCAGTCAACATGATTTC +
Preference number: 4 (lower is better)
Translates to: LIFHECLKKFPSEVSAKGGHGTD*CSQHDF
Trigger: GAAATCATGTTGACTGCATCAGTCTGTACCATGACC...TCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp TCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGTGATACTGCGCAATTTGTGCTaGGTGTCCTCCATCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SNEISIGCQATVRNCIVILRNLC*VSSISS
Trigger: GGAACTGATGGAGGACACGCAGCACAAATTGCGCAG...TATCACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGGTGGCAAACTGCTCCTaGAGTTTAACCCTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKVANCS*SLTLPD
Trigger: GTCAGGCAGGGTTAAACTGCAGGAGCAGTTTGCCAC...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACTCTTTGTTTTGTCATTaGTTGCTCTGGCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENSLFCH*LLWLCL
Trigger: GAGACACAGCCAGAGCAAGCAATGACAAAACAAAGA...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp TCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGTGATATTACCTGACGGCATCTaGCATGGCTTGGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: SNEISIGCQATVRNCIVILPDGI*HGLAGT
Trigger: AGTTCCTGCCAAGCCATGGCAGATGCCGTCAGGTAA...TATCACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGAAGATGTGCTGTCCCTaGCAACTCCTGCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKKMCCP*QLLHQL
Trigger: AAGCTGGTGCAGGAGTTGGCAGGGACAGCACATCTT...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp GACTCCACATTGTTTCCATCTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAAGTGGGCTTATCAAGTaGTCAGTGCAATCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: DSTLFPSPPLKQLSKPCRSGLIK*SVQSCD
Trigger: GTCACAGGATTGCACTGAGCACTTGATAAGCCCACT...TCTACATGGCTTTGATAATTGTTTGAGGGGAGGAGATGGAAACAATGTGGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AGCCATGTAGAACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATATTAGACTGTGCCTTCTaGTCTGTTCTTTGTTTTATG +
Preference number: 4 (lower is better)
Translates to: SHVEQTAVCQLVEAKQPILDCAF*SVLCFM
Trigger: CATAAAACAAAGAACAGAGCAGAAGGCACAGTCTAA...TATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGTTCTACATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp GGAAACTTACTGGGAAGAAGATGTAGGAAGAAGCCTGGTCAGCCCACGCCTAAATTTAAAGGACTGACTTaGTATCACACAAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: GNLLGRRCRKKPGQPTPKFKGLT*YHTKEA
Trigger: TGCCTCTTTTGTGTGATAGCAAGTCAGTCCTTTAAA...TTTAGGCGTGGGCTGACCAGGCTTCTTCCTACATCTTCTTCCCAGTAAGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AAGCCTGGTCAGCCCACGCCTAAAGCACACACCTGGGGAAATAAATTAGCTATTAGTAAATGGGGTTTCTaGTTTAAAGGACTGACTTGC +
Preference number: 4 (lower is better)
Translates to: KPGQPTPKAHTWGNKLAISKWGF*FKGLTC
Trigger: GCAAGTCAGTCCTTTAAAGCAGAAACCCCATTTACT...AATAGCTAATTTATTTCCCCAGGTGTGTGCTTTAGGCGTGGGCTGACCAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp ATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCCATCTACCCACAGCCTaGTCCAGATCTAAATCTCTT +
Preference number: 4 (lower is better)
Translates to: MFHTALLGLIFSTWLIIVHLPTA*SRSKSL
Trigger: AAGAGATTTAGATCTGGACCAGGCTGTGGGTAGATG...GACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp TTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGACATCTACCCACAGCCTaGTCCAGATCTAAATCTCTT +
Preference number: 4 (lower is better)
Translates to: LIFHECLKKFPSEVSAKGHLPTA*SRSKSL
Trigger: AAGAGATTTAGATCTGGACCAGGCTGTGGGTAGATG...TCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp ACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGAAGAGATCTTACTGTCTTATaGCCCAGAACTGCATTTGAT +
Preference number: 4 (lower is better)
Translates to: TSCCQARGETYWEEDVGRDLTVL*PRTAFD
Trigger: ATCAAATGCAGTTCTGGGCCATAAGACAGTAAGATC...TCTTCCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp GACTCCACATTGTTTCCATCTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAGTGAGGGGTGCATTCTaGCCAAAGAAACAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: DSTLFPSPPLKQLSKPCRVRGAF*PKKQKL
Trigger: CAGCTTTTGTTTCTTTGGCCAGAATGCACCCCTCAC...TCTACATGGCTTTGATAATTGTTTGAGGGGAGGAGATGGAAACAATGTGGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AATTGGAAGATGCTTCTTGATTGTAGTTCCCATGGGGAAGAGGGAGGCTGTGATATGGGCTTTGGAGTTTaGTCTGATTGGGTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: NWKMLLDCSSHGEEGGCDMGFGV*SDWVWF
Trigger: AAACCAAACCCAATCAGACCAAACTCCAAAGCCCAT...ATCACAGCCTCCCTCTTCCCCATGGGAACTACAATCAAGAAGCATCTTCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp ATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGACAGGCCTGCTTACTTaGGATGTAGGGTTAGTAAAT +
Preference number: 4 (lower is better)
Translates to: ITTMFHTALLGLIFSTWLTGLLT*DVGLVN
Trigger: ATTTACTAACCCTACATCCCAAGTAAGCAGGCCTGT...CAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACATGGTTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp TCTTCTCCACATTTCCCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATTTGTTGGTTATCTTGTaGATTTCTCGGTGCACATGG +
Preference number: 4 (lower is better)
Translates to: SSPHFPKTNQRETPHCFHLLVIL*ISRCTW
Trigger: CCATGTGCACCGAGAAATTCACAAGATAACCAACAA...ATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGGGAAATGTGGAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp AAGCCTGGTCAGCCCACGCCTAAAGCACACACCTGGGGAAATAAATTAGCTATTTGTTCATCTGTGAAATaGAGAAAATGCTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: KPGQPTPKAHTWGNKLAICSSVK*RKCSWS
Trigger: ACTCCATGAGCATTTTCTTCATTTCACAGATGAACA...AATAGCTAATTTATTTCCCCAGGTGTGTGCTTTAGGCGTGGGCTGACCAGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp GAAGGCCGTGAAGCATTTACACTCTTTAAGACAAATTCCCATCCAAAAATAGTTAGTTCATGGCCCAAATaGAGCTTGTGGCCACCTAGG +
Preference number: 4 (lower is better)
Translates to: EGREAFTLFKTNSHPKIVSSWPK*SLWPPR
Trigger: CCTAGGTGGCCACAAGCTTCATTTGGGCCATGAACT...AACTATTTTTGGATGGGAATTTGTCTTAAAGAGTGTAAATGCTTCACGGCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGGAACAAACGGCTGTCTaGCAACTGGTAGAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKEQTAV*QLVEAK
Trigger: CTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGTTC...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp ATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGGCCCATGGAAAGAACTaGGTGGAAAATTCATTTGTT +
Preference number: 4 (lower is better)
Translates to: ITTMFHTALLGLIFSTWLAHGKN*VENSFV
Trigger: AACAAATGAATTTTCCACGCAGTTCTTTCCATGGGC...CAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACATGGTTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp ACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGAAGAAATTCCAGATGTGCATaGCTCAAAAGAAAAATCCCA +
Preference number: 4 (lower is better)
Translates to: TSCCQARGETYWEEDVGRNSRCA*LKRKIP
Trigger: TGGGATTTTTCTTTTGAGGCATGCACATCTGGAATT...TCTTCCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp CTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAACAAACGGCTGTCTGCCAACCTAAGTACTGTTTCTaGAGGTTAACCTGTATGCTA +
Preference number: 4 (lower is better)
Translates to: LLPSNNYQSHVEQTAVCQPKYCF*RLTCML
Trigger: TAGCATACAGGTTAACCTGCAGAAACAGTACTTAGG...TTGGCAGACAGCCGTTTGTTCTACATGGCTTTGATAATTGTTTGAGGGGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp AAATGCTGCCCTGGCACAGAGGTAGGAGCTGAGCAACACTGCTGGATGAATAAAGTTGGGTGGCAAATTTaGTTCTATGGAAGATTTTTA +
Preference number: 4 (lower is better)
Translates to: KCCPGTEVGAEQHCWMNKVGWQI*FYGRFL
Trigger: TAAAAATCTTCCATAGAAGCAAATTTGCCACCCAAC...TTTATTCATCCAGCAGTGTTGCTCAGCTCCTACCTCTGTGCCAGGGCAGCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTCTCCTGTGTCAGAAATaGTTTTTGGCTTCAAATAAC +
Preference number: 4 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFLLCQK*FLASNN
Trigger: GTTATTTGAAGCCAAAAAGCATTTCTGACACAGGAG...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGACCACTATCCCATGCTaGACTAGTCCCTACCAAGTC +
Preference number: 4 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKTTIPC*TSPYQV
Trigger: GACTTGGTAGGGACTAGTGCAGCATGGGATAGTGGT...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp GTAGAGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCCTCGGAATCATGTTGTaGACTATAGTCAAATGTACT +
Preference number: 4 (lower is better)
Translates to: VEFSVRSRILQPCFTQPCLGIML*TIVKCT
Trigger: AGTACATTTGACTATAGTGCACAACATGATTCCGAG...GCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACATCTCATTGTGATAGCTaGGAGGTAAGTTTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITSHCDS*EVSLPG
Trigger: ACCTGGCAAACTTACCTCCCAGCTATCACAATGAGA...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp CTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAACAAACGGCTGTCTGCCAAGTCCAGTCTGGTTGTTaGTTATCTTGTGAATTTCTC +
Preference number: 4 (lower is better)
Translates to: LLPSNNYQSHVEQTAVCQVQSGC*LSCEFL
Trigger: GAGAAATTCACAAGATAACCAACAACCAGACTGGAC...TTGGCAGACAGCCGTTTGTTCTACATGGCTTTGATAATTGTTTGAGGGGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACACTCTGGATGAATACATaGTGGCAACAGTCCATGACA +
Preference number: 4 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITLWMNT*WQQSMT
Trigger: TGTCATGGACTGTTGCCACCATGTATTCATCCAGAG...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp CAGGGTGAACAGAACATTTCATCTGCAACAGCTGAAGGCACAGCTTACCTATGCGCTATCATGACAAAATaGAGCAGCCTACTATATCTA +
Preference number: 4 (lower is better)
Translates to: QGEQNISSATAEGTAYLCAIMTK*SSLLYL
Trigger: TAGATATAGTAGGCTGCTCCATTTTGTCATGATAGC...GCATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAAATGTTCTGTTCACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGAGAAAGCCAGAGAGCTaGCACCTGAGAAGGACAGAA +
Preference number: 4 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKRKPES*HLRRTE
Trigger: TTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCT...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACAGATTTCACCCTCCCTTaGTCATCTTTATACAGGGCA +
Preference number: 4 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITDFTLP*SSLYRA
Trigger: TGCCCTGTATAAAGATGACCAAGGGAGGGTGAAATC...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AGAAAGCCAGAGAGCTGGCACCTGAGAAGGACAGAACTGTCATTGCAGGATTTGAACTCAAGCATGCATTaGAGCATGTGTTACTATTTA +
Preference number: 4 (lower is better)
Translates to: RKPESWHLRRTELSLQDLNSSMH*SMCYYL
Trigger: TAAATAGTAACACATGCTCCAATGCATGCTTGAGTT...CAAATCCTGCAATGACAGTTCTGTCCTTCTCAGGTGCCAGCTCTCTGGCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACAACAGTCCATGACACCTaGAAACATCATTTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITTVHDT*KHHLWS
Trigger: ACTCCACAAATGATGTTTTCAGGTGTCATGGACTGT...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp GACTCCACATTGTTTCCATCTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAACAGTCCATGACACCTaGAAACATCATTTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: DSTLFPSPPLKQLSKPCRTVHDT*KHHLWS
Trigger: ACTCCACAAATGATGTTTTCAGGTGTCATGGACTGT...TCTACATGGCTTTGATAATTGTTTGAGGGGAGGAGATGGAAACAATGTGGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR TCA 90 bp AACATTTTGGTCACTAGTAGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGCTCCAGCCACTGCAAATaGCTTGCAGTTTCCCCTACA +
Preference number: 4 (lower is better)
Translates to: NILVTSSQNLIRPYVLKGSSHCK*LAVSPT
Trigger: TGTAGGGGAAACTGCAAGTCATTTGCAGTGGCTGGA...GCCTTTCAGGACATATGGCCTTATAAGATTTTGACTACTAGTGACCAAAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp ACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCTTCAGTTGCATGGTAAAATTCTTCTaGTACCCACTCTTTAGACTG +
Preference number: 4 (lower is better)
Translates to: TALLGLIFSTWLIIVFSCMVKFF*YPLFRL
Trigger: CAGTCTAAAGAGTGGGTATCAGAAGAATTTTACCAT...GCAACTGAAGACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp TGTTTCTGCAGGTTAACCTGTATGCTACGCTCAGTCATATACCTTTCAAAGTTATGCCAGGTTGATGTTTaGAAAGCAGGGCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: CFCRLTCMLRSVIYLSKLCQVDV*KAGHSS
Trigger: AGAAGAGTGCCCTGCTTTGCAAACATCAACCTGGCA...TAACTTTGAAAGGTATATGACTGAGCGTAGCATACAGGTTAACCTGCAGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp TATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGAGTGCCAGGTTGATGTTTaGAAAGCAGGGCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: YATLSHIPFKVTNATAKECQVDV*KAGHSS
Trigger: AGAAGAGTGCCCTGCTTTGCAAACATCAACCTGGCA...CTCTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp ACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGAAGACATTTGTTGCATTTTTaGCAGGTTGATGTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: TSCCQARGETYWEEDVGRHLLHF*QVDVCK
Trigger: TTTGCAAACATCAACCTGGCAAAAATGCAACAAATG...TCTTCCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp TGTTTCTGCAGGTTAACCTGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACCACTGCAAATGACTTaGAGTTTCCCCTACATGGCA +
Preference number: 4 (lower is better)
Translates to: CFCRLTCMLRSVIYLSKLPLQMT*SFPYMA
Trigger: TGCCATGTAGGGGAAACTGCAAGTCATTTGCAGTGG...TAACTTTGAAAGGTATATGACTGAGCGTAGCATACAGGTTAACCTGCAGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACCAGAAACAAGAATACTaGACAAACTCAAGCATGCAT +
Preference number: 4 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENQKQEY*TNSSMH
Trigger: ATGCATGCTTGAGTTTGTGCAGTATTCTTGTTTCTG...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp ACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGAAGATGCAGTTCAACTATCTaGCATGATTATTCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: TSCCQARGETYWEEDVGRCSSTI*HDYSFH
Trigger: GTGAAAAGAATAATCATGGCAGATAGTTGAACTGCA...TCTTCCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp GAAGGCCGTGAAGCATTTACACTCTTTAAGACAAATTCCCATCCAAAAATAGTTAAGCAGCCAATAATCTaGACAGGGGTGGCAAACTGC +
Preference number: 4 (lower is better)
Translates to: EGREAFTLFKTNSHPKIVKQPII*TGVANC
Trigger: GCAGTTTGCCACCCCTGTCCAGATTATTGGCTGCTT...AACTATTTTTGGATGGGAATTTGTCTTAAAGAGTGTAAATGCTTCACGGCCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AAGCCTGGTCAGCCCACGCCTAAAGCACACACCTGGGGAAATAAATTAGCTATTTTGATTTTCTCCACGTaGTTGATAATTGTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: KPGQPTPKAHTWGNKLAILIFST*LIIVFS
Trigger: ACTGAAGACAATTATCAACCACGTGGAGAAAATCAA...AATAGCTAATTTATTTCCCCAGGTGTGTGCTTTAGGCGTGGGCTGACCAGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp AATTGGAAGATGCTTCTTGATTGTAGTTCCCATGGGGAAGAGGGAGGCTGTGATTATCTTAAAGTTCAGTaGTTTCATTCAAAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: NWKMLLDCSSHGEEGGCDYLKVQ*FHSKLP
Trigger: GGGGAGCTTTGAATGAAACCACTGAACTTTAAGATA...ATCACAGCCTCCCTCTTCCCCATGGGAACTACAATCAAGAAGCATCTTCCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp CATATTACAACCATGTTTCACACAGCCCTGCTCGGTTaGATTTTCTCCACGTGGTTGATAATTGTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: HITTMFHTALLG*IFSTWLIIVFS
Trigger: ACTGAAGACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
3UTR CAA 72 bp TCCTGTGATTATTTACCTGACAGGGCAAAAGAGATTTaGCAGATGCAATTAAGGTTAAGGACCTTGACGTGG +
Preference number: 4 (lower is better)
Translates to: SCDYLPDRAKEI*QMQLRLRTLTW
Trigger: CCACGTCAAGGTCCTTAACCTTAATTGCATCTGCAAAATCTCTTTTGCCCTGTCAGGTAAATAATCACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp TTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGACTACAGAAGAGCAGTTaGAGTGATTTATGCTTGATT +
Preference number: 4 (lower is better)
Translates to: LIFHECLKKFPSEVSAKGLQKSS*SDLCLI
Trigger: AATCAAGCATAAATCACTTCAACTGCTCTTCTGTAG...TCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACCATTTGTTGCATTTTTaGCAGGTTGATGTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENHLLHF*QVDVCK
Trigger: TTTGCAAACATCAACCTGGCAAAAATGCAACAAATG...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACAGCCCATGGAAAGAACTaGGTGGAAAATTCATTTGTT +
Preference number: 4 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITAHGKN*VENSFV
Trigger: AACAAATGAATTTTCCACGCAGTTCTTTCCATGGGC...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACACTGCTGTTTCTAATTaGAGGTGTATTACAGATACA +
Preference number: 4 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENTAVSN*RCITDT
Trigger: TGTATCTGTAATACACCTGCAATTAGAAACAGCAGT...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACGGTAAAACTTTTTCATaGCAGATGCTGTTTACAACA +
Preference number: 4 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENGKTFS*QMLFTT
Trigger: TGTTGTAAACAGCATCTGGCATGAAAAAGTTTTACC...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp GAAGGCCGTGAAGCATTTACACTCTTTAAGACAAATTCCCATCCAAAAATAGTTCTTTCCTGTGCCCTCTaGCTTCCTGATAAACTCCTA +
Preference number: 4 (lower is better)
Translates to: EGREAFTLFKTNSHPKIVLSCAL*LPDKLL
Trigger: TAGGAGTTTATCAGGAAGCCAGAGGGCACAGGAAAG...AACTATTTTTGGATGGGAATTTGTCTTAAAGAGTGTAAATGCTTCACGGCCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AAAACATCATTTGTGGAGTGGCGTAGAGTTCAGTGTTCGCAGTCGCATATTACATACCAACTTACACTGTaGTTTAAGCTAAATGACCGC +
Preference number: 4 (lower is better)
Translates to: KTSFVEWRRVQCSQSHITYQLTL*FKLNDR
Trigger: GCGGTCATTTAGCTTAAACCACAGTGTAAGTTGGTA...TGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp TATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGAGAATGAGGTCAGGTCATaGTACAGACTGATGCAGTCA +
Preference number: 4 (lower is better)
Translates to: YATLSHIPFKVTNATAKENEVRS*YRLMQS
Trigger: TGACTGCATCAGTCTGTACCATGACCTGACCTCATT...CTCTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp TATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGAGCAGTGCCTGATAGAGTaGAAACACAAAGTTGCACTT +
Preference number: 4 (lower is better)
Translates to: YATLSHIPFKVTNATAKEQCLIE*KHKVAL
Trigger: AAGTGCAACTTTGTGTTTTCACTCTATCAGGCACTG...CTCTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp GACTCCACATTGTTTCCATCTCCTCCCCTCAAACAATTATCAAAGCCATGTAGACACACATTACCTCATTaGCAATTCAGAAGTAAATCC +
Preference number: 4 (lower is better)
Translates to: DSTLFPSPPLKQLSKPCRHTLPH*QFRSKS
Trigger: GGATTTACTTCTGAATTGTCAATGAGGTAATGTGTG...TCTACATGGCTTTGATAATTGTTTGAGGGGAGGAGATGGAAACAATGTGGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp GACTCCACATTGTTTCCATCTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAAATTCCAGATGTGCATaGCTCAAAAGAAAAATCCCA +
Preference number: 4 (lower is better)
Translates to: DSTLFPSPPLKQLSKPCRNSRCA*LKRKIP
Trigger: TGGGATTTTTCTTTTGAGGCATGCACATCTGGAATT...TCTACATGGCTTTGATAATTGTTTGAGGGGAGGAGATGGAAACAATGTGGAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR GCA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGGCACAAACTCAAGCATaGATTGGAGCATGTGTTACT +
Preference number: 4 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKAQTQA*IGACVT
Trigger: AGTAACACATGCTCCAATGCATGCTTGAGTTTGTGC...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp TGTTTCTGCAGGTTAACCTGTATGCTACGCTCAGTCATATACCTTTCAAAGTTAGGTGGCAGCTCAGATTaGTGCAGTGTTGTAATTATA +
Preference number: 4 (lower is better)
Translates to: CFCRLTCMLRSVIYLSKLGGSSD*CSVVII
Trigger: TATAATTACAACACTGCAGCAATCTGAGCTGCCACC...TAACTTTGAAAGGTATATGACTGAGCGTAGCATACAGGTTAACCTGCAGAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AACATTTTGGTCACTAGTAGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGCACATCATTTGTGGAGTaGCGTAGAGTTCAGTGTTCG +
Preference number: 4 (lower is better)
Translates to: NILVTSSQNLIRPYVLKGTSFVE*RRVQCS
Trigger: CGAACACTGAACTCTACGCCACTCCACAAATGATGT...GCCTTTCAGGACATATGGCCTTATAAGATTTTGACTACTAGTGACCAAAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp AACATTTTGGTCACTAGTAGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGCTGGATGAATACATGGTaGCAACAGTCCATGACACCT +
Preference number: 4 (lower is better)
Translates to: NILVTSSQNLIRPYVLKGWMNTW*QQSMTP
Trigger: AGGTGTCATGGACTGTTGCCACCATGTATTCATCCA...GCCTTTCAGGACATATGGCCTTATAAGATTTTGACTACTAGTGACCAAAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp TGTTTCTGCAGGTTAACCTGTATGCTACGCTCAGTCATATACCTTTCAAAGTTATGTGCTTCAGTTGGGTaGCAAATTTGCTTCTATGGA +
Preference number: 4 (lower is better)
Translates to: CFCRLTCMLRSVIYLSKLCASVG*QICFYG
Trigger: TCCATAGAAGCAAATTTGCCACCCAACTGAAGCACA...TAACTTTGAAAGGTATATGACTGAGCGTAGCATACAGGTTAACCTGCAGAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp TGTTTCTGCAGGTTAACCTGTATGCTACGCTCAGTCATATACCTTTCAAAGTTATTCTCCTGCAGGCTATaGTTCATCATGCAAATAGCT +
Preference number: 4 (lower is better)
Translates to: CFCRLTCMLRSVIYLSKLFSCRL*FIMQIA
Trigger: AGCTATTTGCATGATGAACCATAGCCTGCAGGAGAA...TAACTTTGAAAGGTATATGACTGAGCGTAGCATACAGGTTAACCTGCAGAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp GCTGACTTCAATATAGTAGCTCTAATATTATGGTCCTaGAGGATCTTACTGTCTTATGGCCCAGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: ADFNIVALILWS*RILLSYGPELH
Trigger: ATGCAGTTCTGGGCCATAAGACAGTAAGATCCTCAAGGACCATAATATTAGAGCTACTATATTGAAGTCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp GATTGTGATTATTTACCTGACAGGGCAAAAGAGATTTaGCAGATGCAATTAAGGTTAAGGACCTTGACGTGG +
Preference number: 4 (lower is better)
Translates to: DCDYLPDRAKEI*QMQLRLRTLTW
Trigger: CCACGTCAAGGTCCTTAACCTTAATTGCATCTGCAAAATCTCTTTTGCCCTGTCAGGTAAATAATCACAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp TATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGAGAGCAACACTGCTGGATaGATAAACACATGTAATGCA +
Preference number: 4 (lower is better)
Translates to: YATLSHIPFKVTNATAKESNTAG*INTCNA
Trigger: TGCATTACATGTGTTTATTCATCCAGCAGTGTTGCT...CTCTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CCA 90 bp TATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGAGCTAAACCACATTACGTaGACTAGAGGATACTCTGAA +
Preference number: 4 (lower is better)
Translates to: YATLSHIPFKVTNATAKELNHIT*TRGYSE
Trigger: TTCAGAGTATCCTCTAGTCCACGTAATGTGGTTTAG...CTCTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp ATGCTGAAAGAGGTGTGCTTCAGTTGGGTGGCAAATTaGCTTCTATGGAAGATTTTTAATACAGGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: MLKEVCFSWVAN*LLWKIFNTGCF
Trigger: GAAACAACCTGTATTAAAAATCTTCCATAGAAGCAAATTTGCCACCCAACTGAAGCACACCTCTTTCAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp AAAGAGATTTTGCAGATGCAATTAAGGTTAAGGACCTaGACGTGGGAAGATTATTCTGGATTATCTAGGTGG +
Preference number: 4 (lower is better)
Translates to: KEILQMQLRLRT*TWEDYSGLSRW
Trigger: CCACCTAGATAATCCAGAATAATCTTCCCACGTCAAGGTCCTTAACCTTAATTGCATCTGCAAAATCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp AAAGAGATTTTGCAGATGCAATTAAGGTTAAGGACCTaGACGTGGGAAGATTGTGATTATTTACCTGACAGG +
Preference number: 4 (lower is better)
Translates to: KEILQMQLRLRT*TWEDCDYLPDR
Trigger: CCTGTCAGGTAAATAATCACAATCTTCCCACGTCAAGGTCCTTAACCTTAATTGCATCTGCAAAATCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AACATTTTGGTCACTAGTAGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGCCCTAAGTACTGTTTCTaGAGGTTAACCTGTATGCTA +
Preference number: 4 (lower is better)
Translates to: NILVTSSQNLIRPYVLKGPKYCF*RLTCML
Trigger: TAGCATACAGGTTAACCTGCAGAAACAGTACTTAGG...GCCTTTCAGGACATATGGCCTTATAAGATTTTGACTACTAGTGACCAAAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp AACATTTTGGTCACTAGTAGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGCAATTGTTTTGTCAAATaGAGTTACCCACTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: NILVTSSQNLIRPYVLKGNCFVK*SYPLGS
Trigger: ACTGCCCAGTGGGTAACTGCATTTGACAAAACAATT...GCCTTTCAGGACATATGGCCTTATAAGATTTTGACTACTAGTGACCAAAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR GCA 90 bp TATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGAGCATGAAATTGGAAGATaGTTCTTGATTGTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: YATLSHIPFKVTNATAKEHEIGR*FLIVVP
Trigger: GGGAACTACAATCAAGAAGCATCTTCCAATTTCATG...CTCTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp TCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGTGATATGTAGGGTTAGTAAATaGGGTTTCTGCTTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: SNEISIGCQATVRNCIVICRVSK*GFCFKG
Trigger: TCCTTTAAAGCAGAAACCCCATTTACTAACCCTACA...TATCACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp TCAAAAAGTAATCTCCAAATAGTTGAATTGCATTTCTaGAGTATCTGGAGAGGATGTGCAGACCACAGGAAT +
Preference number: 4 (lower is better)
Translates to: SKSNLQIVELHF*SIWRGCADHRN
Trigger: ATTCCTGTGGTCTGCACATCCTCTCCAGATACTCAAGAAATGCAATTCAACTATTTGGAGATTACTTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR TCA 90 bp AACATTTTGGTCACTAGTAGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGCACTGAAGTAATGTTCTaGGTTTGCATTAGTGGGATT +
Preference number: 4 (lower is better)
Translates to: NILVTSSQNLIRPYVLKGTEVMF*VCISGI
Trigger: AATCCCACTAATGCAAACTCAGAACATTACTTCAGT...GCCTTTCAGGACATATGGCCTTATAAGATTTTGACTACTAGTGACCAAAATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp TCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGTGATAATAATCACTATAACCTaGACATACTGTACTAGATGC +
Preference number: 4 (lower is better)
Translates to: SNEISIGCQATVRNCIVIIITIT*TYCTRC
Trigger: GCATCTAGTACAGTATGTCCAGGTTATAGTGATTAT...TATCACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CCA 90 bp GAAGGCCGTGAAGCATTTACACTCTTTAAGACAAATTCCCATCCAAAAATAGTTTTAAGAACATTATTCTaGAACATCAGAACGTTTCCC +
Preference number: 4 (lower is better)
Translates to: EGREAFTLFKTNSHPKIVLRTLF*NIRTFP
Trigger: GGGAAACGTTCTGATGTTCCAGAATAATGTTCTTAA...AACTATTTTTGGATGGGAATTTGTCTTAAAGAGTGTAAATGCTTCACGGCCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
3UTR CAA 72 bp GTCATGGTACAGACTGATGCAGTCAACATGATTTCATaGCAGAGTTTATTAGTATCAGCAAGTTTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: VMVQTDAVNMIS*QSLLVSASFCF
Trigger: AAAGCAAAAACTTGCTGATACTAATAAACTCTGCAATGAAATCATGTTGACTGCATCAGTCTGTACCATGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS CCA 90 bp CGCAGCCGCCGCCCCGACTGGACCGAGTTGCGCTGCGGGCCGGACTaGATCTGCTCGCTCCCGCCGGGAGGCCGCCGGGCTGCGGGTGCA +
Preference number: 5 (lower is better)
Translates to: RSRRPDWTELRCGPD*ICSLPPGGRRAAGA
Trigger: TGCACCCGCAGCCCGGCGGCCTCCCGGCGGGAGCGAGCAGATCCAGTCCGGCCCGCAGCGCAACTCGGTCCAGTCGGGGCGGCGGCTGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000534479.5
CDS CCA 90 bp GGTGGCCTCCTCCTGCGGGTAGCTGAGAGCCGGGCCGGGCTTGACTaGAGCCGAGGTCGCCGTCGGAGCGGGCGCGGGGGCCGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: GGLLLRVAESRAGLD*SRGRRRSGRGGRGD
Trigger: GTCCCCACGGCCCCCGCGCCCGCTCCGACGGCGACCTCGGCTCCAGTCAAGCCCGGCCCGGCTCTCAGCTACCCGCAGGAGGAGGCCACC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000526218.5
ENST00000527132.1
ENST00000529338.1
ENST00000530694.5
ENST00000533813.5
ENST00000533900.1
ENST00000534479.5
ENST00000534511.5
ENST00000683431.1
CDS GCA 90 bp GCAGCAGGCACAGCAGGGTGGCCCCAAGCCGCTGCATCTCCGCTCTaGGCCCGCAGCCGCCGCCCCGACTGGACCGAGTTGCGCTGCGGG +
Preference number: 5 (lower is better)
Translates to: AAGTAGWPQAAASPL*ARSRRPDWTELRCG
Trigger: CCCGCAGCGCAACTCGGTCCAGTCGGGGCGGCGGCTGCGGGCGCAGAGCGGAGATGCAGCGGCTTGGGGCCACCCTGCTGTGCCTGCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326932.8
ENST00000533900.1
ENST00000534479.5
CDS CCA 90 bp CGGGTGCAGAGCATCCTCTGGCCCCGGCATGGCTGGCAGGTGTACTaGAAGCTGGCAAACTGGCAGTACATGCTGGGCCCACAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: RVQSILWPRHGWQVY*KLANWQYMLGPQSS
Trigger: CGAGGACTGTGGGCCCAGCATGTACTGCCAGTTTGCCAGCTTCCAGTACACCTGCCAGCCATGCCGGGGCCAGAGGATGCTCTGCACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000525927.5
ENST00000528188.5
ENST00000532372.5
ENST00000532873.5
ENST00000533813.5
ENST00000534511.5
ENST00000683431.1
CDS GCA 90 bp TACCCACAGCCTGGTCCAGATCTAAATCTCTTCCCCTCCCAGCAGTaGAGCGGCGGCAGCCGCAGGCTCCCTCAGCGCCATCTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: YPQPGPDLNLFPSQQ*SGGSRRLPQRHLFS
Trigger: ACTGAAGAGATGGCGCTGAGGGAGCCTGCGGCTGCCGCCGCTGCACTGCTGGGAGGGGAAGAGATTTAGATCTGGACCAGGCTGTGGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000683431.1
CDS CCA 90 bp CTCTGGCCCCGGCATGGCTGGCAGGTGTACTGGAAGCTGGCAAACTaGCAGTACATGCTGGGCCCACAGTCCTCGTCGATGATGCACTCG +
Preference number: 5 (lower is better)
Translates to: LWPRHGWQVYWKLAN*QYMLGPQSSSMMHS
Trigger: CGAGTGCATCATCGACGAGGACTGTGGGCCCAGCATGTACTGCCAGTTTGCCAGCTTCCAGTACACCTGCCAGCCATGCCGGGGCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000532873.5
ENST00000533813.5
ENST00000683431.1
CDS CCA 90 bp CTCTGGCCCCGGCATGGCTGGCAGGTGTACTGGAAGCTGGCAAACTaGCAGTACATGCTGGGCCCACAGTCCTCGTCGATGATGCACTCC +
Preference number: 5 (lower is better)
Translates to: LWPRHGWQVYWKLAN*QYMLGPQSSSMMHS
Trigger: GGAGTGCATCATCGACGAGGACTGTGGGCCCAGCATGTACTGCCAGTTTGCCAGCTTCCAGTACACCTGCCAGCCATGCCGGGGCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525927.5
ENST00000528188.5
ENST00000532372.5
ENST00000534511.5
CDS CCA 90 bp TCACGGCTCCCCACGAAGGTCGGCTTGCACACATACACCAGGCTGTaGCTGGGGAGAGATGGGACAAAGCCAGGCTCTAAACGTGGGAGC +
Preference number: 5 (lower is better)
Translates to: SRLPTKVGLHTYTRL*LGRDGTKPGSKRGS
Trigger: GCTCCCACGTTTAGAGCCTGGCTTTGTCCCATCTCTCCCCAGCCACAGCCTGGTGTATGTGTGCAAGCCGACCTTCGTGGGGAGCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525493.5
CDS GCA 90 bp AGCAGGGTCAGGAAAGGCCTCCAGACTCTAGTCGCTCCTGATCCCTaGCTGGCTGCACTGCCCTTCAGCATCTCCATGCCTAGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: SRVRKGLQTLVAPDP*LAALPFSISMPRRL
Trigger: AAGCCTCCTAGGCATGGAGATGCTGAAGGGCAGTGCAGCCAGGCAGGGATCAGGAGCGACTAGAGTCTGGAGGCCTTTCCTGACCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532372.5
CDS CCA 90 bp GGATGTGAAGCAGCAGCTGGCTCTCCTGCTAGGTCAGGCAGCAGATaGGGTCCGGGATCCAAAAAGATGGCCAGGCTGAGTATCCCACGG +
Preference number: 5 (lower is better)
Translates to: GCEAAAGSPARSGSR*GPGSKKMARLSIPR
Trigger: CCGTGGGATACTCAGCCTGGCCATCTTTTTGGATCCCGGACCCCATCTGCTGCCTGACCTAGCAGGAGAGCCAGCTGCTGCTTCACATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526218.5
CDS-3UTR CAA 90 bp GTAGAGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCAGAGCCGGGCCGGGCTaGACTGGAGCCGAGGTCGCC +
Preference number: 5 (lower is better)
Translates to: VEFSVRSRILQPCFTQPCRAGPG*TGAEVA
Trigger: GGCGACCTCGGCTCCAGTCAAGCCCGGCCCGGCTCT...GCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACTCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp CAGGGTGAACAGAACATTTCATCTGCAACAGCTGAAGGCACAGCTTACCTATGCAGAGCCGGGCCGGGCTaGACTGGAGCCGAGGTCGCC +
Preference number: 5 (lower is better)
Translates to: QGEQNISSATAEGTAYLCRAGPG*TGAEVA
Trigger: GGCGACCTCGGCTCCAGTCAAGCCCGGCCCGGCTCT...GCATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAAATGTTCTGTTCACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS GCA 90 bp GCAGCTTCTTCTGCCTCCATCTCTTCCACCGCGCTGCGCAATTTGTaGTGCGTGTCCTCCATCAGTTCCTCAACCTCGCGGAACATCTCA +
Preference number: 5 (lower is better)
Translates to: AASSASISSTALRNL*CVSSISSSTSRNIS
Trigger: TGAGATGTTCCGCGAGGTTGAGGAACTGATGGAGGACACGCAGCACAAATTGCGCAGCGCGGTGGAAGAGATGGAGGCAGAAGAAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000526218.5
ENST00000529338.1
ENST00000530694.5
ENST00000533813.5
ENST00000533900.1
ENST00000534479.5
ENST00000534511.5
ENST00000683431.1
CDS-3UTR CAA 90 bp TCTTCTCCACATTTCCCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATCCCGACTGGACCGAGTaGCGCTGCGGGCCGGACTGG +
Preference number: 5 (lower is better)
Translates to: SSPHFPKTNQRETPHCFHPDWTE*RCGPDW
Trigger: CCAGTCCGGCCCGCAGCGCAACTCGGTCCAGTCGGG...ATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGGGAAATGTGGAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326932.8
CDS-3UTR CAA 90 bp CTGGAACATCAGAACGTTTCCCTTAGACCGATCCCAGCAGGTGGCAGCTCAGATTCGCGGAACATCTCATaGAGGGTGGCCTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LEHQNVSLRPIPAGGSSDSRNIS*RVASSC
Trigger: GCAGGAGGAGGCCACCCTCAATGAGATGTTCCGCGA...ATCTGAGCTGCCACCTGCTGGGATCGGTCTAAGGGAAACGTTCTGATGTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS GCA 90 bp GCTTCTTCTGCCTCCATCTCTTCCACCGCGCTGCGCAATTTGTGCTaGGTGTCCTCCATCAGTTCCTCAACCTCGCGGAACATCTCATTG +
Preference number: 5 (lower is better)
Translates to: ASSASISSTALRNLC*VSSISSSTSRNISL
Trigger: CAATGAGATGTTCCGCGAGGTTGAGGAACTGATGGAGGACACGCAGCACAAATTGCGCAGCGCGGTGGAAGAGATGGAGGCAGAAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000526218.5
ENST00000529338.1
ENST00000530694.5
ENST00000533813.5
ENST00000533900.1
ENST00000534479.5
ENST00000534511.5
ENST00000683431.1
CDS TCA 90 bp GGTCAGGCAGCAGATGGGGTCCGGGATCCAAAAAGATGGCCAGGCTaGGTATCCCACGGTAACAAGAGCAGCTCATCCTATGCACAATGT +
Preference number: 5 (lower is better)
Translates to: GQAADGVRDPKRWPG*VSHGNKSSSSYAQC
Trigger: ACATTGTGCATAGGATGAGCTGCTCTTGTTACCGTGGGATACTCAGCCTGGCCATCTTTTTGGATCCCGGACCCCATCTGCTGCCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526218.5
CDS-3UTR CAA 90 bp AAATGCTGCCCTGGCACAGAGGTAGGAGCTGAGCAACACTGCTGGATGAATAAAACCGCGCTGCGCAATTaGTGCTGCGTGTCCTCCATC +
Preference number: 5 (lower is better)
Translates to: KCCPGTEVGAEQHCWMNKTALRN*CCVSSI
Trigger: GATGGAGGACACGCAGCACAAATTGCGCAGCGCGGT...TTTATTCATCCAGCAGTGTTGCTCAGCTCCTACCTCTGTGCCAGGGCAGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp CAACACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGCAGGATCTCCCCATCTaGGTCACGGCTCCCCACGAA +
Preference number: 5 (lower is better)
Translates to: QHLMLSSQRGNLLGRRCRQDLPI*VTAPHE
Trigger: TTCGTGGGGAGCCGTGACCAAGATGGGGAGATCCTG...CCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp GTAGAGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGCGGAACATCTCATaGAGGGTGGCCTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: VEFSVRSRILQPCFTQPCSRNIS*RVASSC
Trigger: GCAGGAGGAGGCCACCCTCAATGAGATGTTCCGCGA...GCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp ACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAATCTGGACAGGTGGCAGTCCCTCTGGTaGTCACAGATGGTCCCATTG +
Preference number: 5 (lower is better)
Translates to: TNGCLPTGRGKAANNLDRWQSLW*SQMVPL
Trigger: CAATGGGACCATCTGTGACAACCAGAGGGACTGCCA...CCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp GTAGAGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCCAGGATCTCCCCATCTaGGTCACGGCTCCCCACGAA +
Preference number: 5 (lower is better)
Translates to: VEFSVRSRILQPCFTQPCQDLPI*VTAPHE
Trigger: TTCGTGGGGAGCCGTGACCAAGATGGGGAGATCCTG...GCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp ATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGACCGCGCTGCGCAATTaGTGCTGCGTGTCCTCCATC +
Preference number: 5 (lower is better)
Translates to: ITTMFHTALLGLIFSTWLTALRN*CCVSSI
Trigger: GATGGAGGACACGCAGCACAAATTGCGCAGCGCGGT...CAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACATGGTTGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACCCCACGAAGGTCGGCTaGCACACATACACCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENPTKVG*HTYTRL
Trigger: CAGCCTGGTGTATGTGTGCAAGCCGACCTTCGTGGG...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp CTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGTTTCTCTTCCTGTCTTaGTCCCTCACACTACAGCAG +
Preference number: 5 (lower is better)
Translates to: LPYTNQKLSAQWATVLTRFLFLS*SLTLQQ
Trigger: CTGCTGTAGTGTGAGGGACAAAGACAGGAAGAGAAA...CCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp CAGGGTGAACAGAACATTTCATCTGCAACAGCTGAAGGCACAGCTTACCTATGCAACTCCTGCACCAGCTaGACTGGTGGTGGAAGAGGC +
Preference number: 5 (lower is better)
Translates to: QGEQNISSATAEGTAYLCNSCTS*TGGGRG
Trigger: GCCTCTTCCACCACCAGTCAAGCTGGTGCAGGAGTT...GCATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAAATGTTCTGTTCACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS GCA 90 bp CCTTTAGGCCATTGGGCTCCACATAAGGTGTTCTTGTTCTCAAACTaGCTGACCAGAGGTGGGATTACAAAAGGGGTAGCCATCCCAGAG +
Preference number: 5 (lower is better)
Translates to: PLGHWAPHKVFLFSN*LTRGGITKGVAIPE
Trigger: CTCTGGGATGGCTACCCCTTTTGTAATCCCACCTCTGGTCAGGCAGTTTGAGAACAAGAACACCTTATGTGGAGCCCAATGGCCTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531309.1
CDS CCA 90 bp TCCCTGATCATAATTGTTCAGAAAGCTGCTCCAGCCGAGGGGCCCTaGAGAAGGCTGAGGGTTGCACAAATTCAGTCAACACATAATCGG +
Preference number: 5 (lower is better)
Translates to: SLIIIVQKAAPAEGP*RRLRVAQIQSTHNR
Trigger: CCGATTATGTGTTGACTGAATTTGTGCAACCCTCAGCCTTCTCCAGGGCCCCTCGGCTGGAGCAGCTTTCTGAACAATTATGATCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525927.5
CDS-3UTR CAA 90 bp CAACACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGACAGCCCTGCTCGGTTaGATTTTCTCCACGTGGTTG +
Preference number: 5 (lower is better)
Translates to: QHLMLSSQRGNLLGRRCRTALLG*IFSTWL
Trigger: CAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGT...CCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACGCAGGAACTCTGGCTTaGGGAGAGAGCAGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENAGTLA*GESSSK
Trigger: CTTGCTGCTGCTCTCTCCCAAAGCCAGAGTTCCTGC...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp CAACACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGAGAACCAGTTGGGCTTaGTTCTCCTGCAGGCTATGG +
Preference number: 5 (lower is better)
Translates to: QHLMLSSQRGNLLGRRCRRTSWA*FSCRLW
Trigger: CCATAGCCTGCAGGAGAACAAAGCCCAACTGGTTCT...CCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp ACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATAATTGTCTTCAGTTGCCTGGGTAGTGCCATTTaGGCCGGACATGGTTGGGGT +
Preference number: 5 (lower is better)
Translates to: TALLGLIFSTWLIIVFSCLGSAI*AGHGWG
Trigger: ACCCCAACCATGTCCGGCCAAAATGGCACTACCCAG...GCAACTGAAGACAATTATCAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS GCA 90 bp ACAAACTTGATTATGCACGTCCCTGATCATAATTGTTCAGAAAGCTaGTCCAGCCGAGGGGCCCTGGAGAAGGCTGAGGGTTGCACAAAT +
Preference number: 5 (lower is better)
Translates to: TNLIMHVPDHNCSES*SSRGALEKAEGCTN
Trigger: ATTTGTGCAACCCTCAGCCTTCTCCAGGGCCCCTCGGCTGGAGCAGCTTTCTGAACAATTATGATCAGGGACGTGCATAATCAAGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525927.5
CDS-3UTR CAA 90 bp AGCCATGTAGAACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATAAGCTGGGAGGTAAGTTaGCCAGGTTCACTTCTGATG +
Preference number: 5 (lower is better)
Translates to: SHVEQTAVCQLVEAKQPISWEVS*PGSLLM
Trigger: CATCAGAAGTGAACCTGGCAAACTTACCTCCCAGCT...TATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGTTCTACATGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTCCATTCTCCTTCCTTTaGGGGAGCACTTTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFPFSFL*GSTFGG
Trigger: GCCACCAAAAGTGCTCCCCAAAAGGAAGGAGAATGG...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp TTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGAGGCATCTGCCATGGCTaGGCAGGAACTCTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: LIFHECLKKFPSEVSAKGGICHG*AGTLAL
Trigger: CAAAGCCAGAGTTCCTGCCAAGCCATGGCAGATGCC...TCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp AAATGCTGCCCTGGCACAGAGGTAGGAGCTGAGCAACACTGCTGGATGAATAAAGGATTTCACCCTCCCTaGGTCATCTTTATACAGGGC +
Preference number: 5 (lower is better)
Translates to: KCCPGTEVGAEQHCWMNKGFHPP*VIFIQG
Trigger: GCCCTGTATAAAGATGACCAAGGGAGGGTGAAATCC...TTTATTCATCCAGCAGTGTTGCTCAGCTCCTACCTCTGTGCCAGGGCAGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS CCA 90 bp CACCTGATATACCAGGTCTGTCACCAAAGTCCCAGTCAACATGTCTaGTACTTGCTTGTACCCCTTTCAAAGCTGAGATGGGCCATGCAA +
Preference number: 5 (lower is better)
Translates to: HLIYQVCHQSPSQHV*YLLVPLSKLRWAMQ
Trigger: TTGCATGGCCCATCTCAGCTTTGAAAGGGGTACAAGCAAGTACCAGACATGTTGACTGGGACTTTGGTGACAGACCTGGTATATCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531309.1
CDS-3UTR CAA 90 bp TCTTCTCCACATTTCCCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATTGGCAGTCCCTCTGGTaGTCACAGATGGTCCCATTG +
Preference number: 5 (lower is better)
Translates to: SSPHFPKTNQRETPHCFHWQSLW*SQMVPL
Trigger: CAATGGGACCATCTGTGACAACCAGAGGGACTGCCA...ATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGGGAAATGTGGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp AGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTGCATTTTTGCCAGGTaGATGTTTGCAAAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: SSVFAVAYYNHVSHSPARCIFAR*MFAKQG
Trigger: GCCCTGCTTTGCAAACATCAACCTGGCAAAAATGCA...CCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp CTGCCCTACACCAATCAGAAGCTCAGTGCCCAATGGGCCACTGTTTTGACTCGGATTTTCTCCACGTGGTaGATAATTGTCTTCAGTTGC +
Preference number: 5 (lower is better)
Translates to: LPYTNQKLSAQWATVLTRIFSTW*IIVFSC
Trigger: GCAACTGAAGACAATTATCAACCACGTGGAGAAAAT...CCGAGTCAAAACAGTGGCCCATTGGGCACTGAGCTTCTGATTGGTGTAGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACACAGCCCTGCTCGGTTaGATTTTCTCCACGTGGTTG +
Preference number: 5 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENTALLG*IFSTWL
Trigger: CAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGT...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGGCCCAGAACTGCATTaGATTAAAGAAGGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFGPELH*IKEGSP
Trigger: AGGGGAGCCTTCTTTAATCAAATGCAGTTCTGGGCC...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp CAACACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGTGGTGGAGAACAGGATaGGTTTCCTCCTCAATGTCA +
Preference number: 5 (lower is better)
Translates to: QHLMLSSQRGNLLGRRCRWWRTG*VSSSMS
Trigger: TGACATTGAGGAGGAAACCAATCCTGTTCTCCACCA...CCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp CTGGAACATCAGAACGTTTCCCTTAGACCGATCCCAGCAGGTGGCAGCTCAGATACCTGTACAAGAGAATaGATCTCAACTGAGTGTCAG +
Preference number: 5 (lower is better)
Translates to: LEHQNVSLRPIPAGGSSDTCTRE*ISTECQ
Trigger: CTGACACTCAGTTGAGATCAATTCTCTTGTACAGGT...ATCTGAGCTGCCACCTGCTGGGATCGGTCTAAGGGAAACGTTCTGATGTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp TCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGTGATACCCACGAAGGTCGGCTaGCACACATACACCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SNEISIGCQATVRNCIVIPTKVG*HTYTRL
Trigger: CAGCCTGGTGTATGTGTGCAAGCCGACCTTCGTGGG...TATCACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTTGCATTTTTGCCAGGTaGATGTTTGCAAAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFCIFAR*MFAKQG
Trigger: GCCCTGCTTTGCAAACATCAACCTGGCAAAAATGCA...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp AATTGGAAGATGCTTCTTGATTGTAGTTCCCATGGGGAAGAGGGAGGCTGTGATCTGTCATTGCAGGATTaGAAGATGAAGGGGCCCATG +
Preference number: 5 (lower is better)
Translates to: NWKMLLDCSSHGEEGGCDLSLQD*KMKGPM
Trigger: CATGGGCCCCTTCATCTTCAAATCCTGCAATGACAG...ATCACAGCCTCCCTCTTCCCCATGGGAACTACAATCAAGAAGCATCTTCCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACAAGGTTACTGTCCCCTaGTGCCTGGTCACTAGTAAC +
Preference number: 5 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENKVTVP*CLVTSN
Trigger: GTTACTAGTGACCAGGCACAAGGGGACAGTAACCTT...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp CCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATCTCCTCCCCTCAAACATTGGAAGATGCTTCTaGATTGTAGTTCCCATGGGG +
Preference number: 5 (lower is better)
Translates to: PKTNQRETPHCFHLLPSNIGRCF*IVVPMG
Trigger: CCCCATGGGAACTACAATCAAGAAGCATCTTCCAAT...GTTTGAGGGGAGGAGATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS CCA 90 bp CTCGGTGCACATGGATGGTATTATTTCCAACCTTCGTGTCTGTGTTaGTCTCATTGTGATAGCTGGGAGGTAAGTTTGCCAGGTTCACTT +
Preference number: 5 (lower is better)
Translates to: LGAHGWYYFQPSCLC*SHCDSWEVSLPGSL
Trigger: AAGTGAACCTGGCAAACTTACCTCCCAGCTATCACAATGAGACCAACACAGACACGAAGGTTGGAAATAATACCATCCATGTGCACCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000526218.5
ENST00000529338.1
ENST00000530694.5
ENST00000531309.1
ENST00000532873.5
ENST00000533813.5
ENST00000533900.1
ENST00000534479.5
ENST00000534511.5
ENST00000683431.1
CDS-3UTR CAA 90 bp GTAGAGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCGAGAGGGAATTGATCTaGGATATGAAAATGCTGCCC +
Preference number: 5 (lower is better)
Translates to: VEFSVRSRILQPCFTQPCERELI*DMKMLP
Trigger: GGGCAGCATTTTCATATCCAAGATCAATTCCCTCTC...GCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp AGTGTCAATATCATTGTCTTCATTAGAAGGACGGCTGCCCCACACTGTGAGAACAGAGGTGTGCTTCAGTaGGGTGGCAAATTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SVNIIVFIRRTAAPHCENRGVLQ*GGKFAS
Trigger: AGAAGCAAATTTGCCACCCAACTGAAGCACACCTCT...GTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp AGCCATGTAGAACAAACGGCTGTCTGCCAACTGGTAGAGGCAAAGCAGCCAATATCATACATATTCCATTaGTCCTTTCAGAAGGCCGTG +
Preference number: 5 (lower is better)
Translates to: SHVEQTAVCQLVEAKQPISYIFH*SFQKAV
Trigger: CACGGCCTTCTGAAAGGACAAATGGAATATGTATGA...TATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGTTCTACATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp ATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGTTGTTTTGTCATTGCTaGCTCTGGCTGTGTCTCCCT +
Preference number: 5 (lower is better)
Translates to: ITTMFHTALLGLIFSTWLLFCHC*LWLCLP
Trigger: AGGGAGACACAGCCAGAGCAAGCAATGACAAAACAA...CAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACATGGTTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp AGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTGACTGTCTTTGTTTaGTCATTGCTTGCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: SSVFAVAYYNHVSHSPARLTVFV*SLLALA
Trigger: AGCCAGAGCAAGCAATGACAAAACAAAGACAGTCAA...CCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp CCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATCTCCTCCCCTCAAACCTTCAGCTAAGTATTTaGCAAAGCCTCTCGTGTTCT +
Preference number: 5 (lower is better)
Translates to: PKTNQRETPHCFHLLPSNLQLSI*QSLSCS
Trigger: AGAACACGAGAGGCTTTGCAAAATACTTAGCTGAAG...GTTTGAGGGGAGGAGATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp AAGCCTGGTCAGCCCACGCCTAAAGCACACACCTGGGGAAATAAATTAGCTATTTACAGGCCTGCTTACTaGGGATGTAGGGTTAGTAAA +
Preference number: 5 (lower is better)
Translates to: KPGQPTPKAHTWGNKLAIYRPAY*GCRVSK
Trigger: TTTACTAACCCTACATCCCAAGTAAGCAGGCCTGTA...AATAGCTAATTTATTTCCCCAGGTGTGTGCTTTAGGCGTGGGCTGACCAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp CTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAACAAACGGCTGTCTGCCAACTAGGTCCCATAGGATaGTCGTTGCCCTTGTTAATG +
Preference number: 5 (lower is better)
Translates to: LLPSNNYQSHVEQTAVCQLGPIG*SLPLLM
Trigger: CATTAACAAGGGCAACGACAATCCTATGGGACCTAG...TTGGCAGACAGCCGTTTGTTCTACATGGCTTTGATAATTGTTTGAGGGGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS GCA 90 bp CTTTCTTCATCAGGTCAGAATGGGAATGAACCTGGTTGTTCTTCATaGATGATGTTAGACCAAGAGGCACTCAGACAGGTGGTAGTTTGG +
Preference number: 5 (lower is better)
Translates to: LSSSGQNGNEPGCSS*MMLDQEALRQVVVW
Trigger: CCAAACTACCACCTGTCTGAGTGCCTCTTGGTCTAACATCATGCATGAAGAACAACCAGGTTCATTCCCATTCTGACCTGATGAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530694.5
CDS-3UTR CAA 90 bp CTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAACAAACGGCTGTCTGCCAAGAGAGGGAATTGATCTaGGATATGAAAATGCTGCCC +
Preference number: 5 (lower is better)
Translates to: LLPSNNYQSHVEQTAVCQERELI*DMKMLP
Trigger: GGGCAGCATTTTCATATCCAAGATCAATTCCCTCTC...TTGGCAGACAGCCGTTTGTTCTACATGGCTTTGATAATTGTTTGAGGGGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp GTAGAGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCGGTCAGAAATTGTTATaGGACCCTAAAACCTTGCCT +
Preference number: 5 (lower is better)
Translates to: VEFSVRSRILQPCFTQPCGQKLL*DPKTLP
Trigger: AGGCAAGGTTTTAGGGTCCAATAACAATTTCTGACC...GCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp AGTTCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGGGAGGCTGTGATCATTaGGTTAGATACAGCATTAAT +
Preference number: 5 (lower is better)
Translates to: SSVFAVAYYNHVSHSPARGGCDH*VRYSIN
Trigger: ATTAATGCTGTATCTAACCAAATGATCACAGCCTCC...CCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS TCA 90 bp GCTCCTTCTGCCTTCTTCGTCTCCCACAGATGTGATAACTGTCTCTaGAAAGACCATTTGTCCAGTCTGGTTGTTGGTTATCTTGTGAAT +
Preference number: 5 (lower is better)
Translates to: APSAFFVSHRCDNCL*KDHLSSLVVGYLVN
Trigger: ATTCACAAGATAACCAACAACCAGACTGGACAAATGGTCTTTTCAGAGACAGTTATCACATCTGTGGGAGACGAAGAAGGCAGAAGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000526218.5
ENST00000531309.1
ENST00000532873.5
ENST00000533813.5
ENST00000683431.1
CDS CCA 90 bp TCATGCATGATGTTAGACCAAGAGGCACTCAGACAGGTGGTAGTTTaGGGAAAAATCTGCCAGAGAATTTTGAACGCACAACCAGCAAAT +
Preference number: 5 (lower is better)
Translates to: SCMMLDQEALRQVVV*GKICQRILNAQPAN
Trigger: ATTTGCTGGTTGTGCGTTCAAAATTCTCTGGCAGATTTTTCCCCAAACTACCACCTGTCTGAGTGCCTCTTGGTCTAACATCATGCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530694.5
CDS CCA 90 bp AGTGCTGGCCATGACTTACCTTGTGAATTTCTCGGTGCACATGGATaGTATTATTTCCAACCTTCGTGTCTGTGTTGGTCTCATTGTGAT +
Preference number: 5 (lower is better)
Translates to: SAGHDLPCEFLGAHG*YYFQPSCLCWSHCD
Trigger: ATCACAATGAGACCAACACAGACACGAAGGTTGGAAATAATACCATCCATGTGCACCGAGAAATTCACAAGGTAAGTCATGGCCAGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534479.5
CDS-3UTR CAA 90 bp TCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGTGATACCATTCTCCTTCCTTTaGGGGAGCACTTTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: SNEISIGCQATVRNCIVIPFSFL*GSTFGG
Trigger: GCCACCAAAAGTGCTCCCCAAAAGGAAGGAGAATGG...TATCACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp CAGGGTGAACAGAACATTTCATCTGCAACAGCTGAAGGCACAGCTTACCTATGCACAGTGTCAATATCATaGTCTTCATTAGAAGGACGG +
Preference number: 5 (lower is better)
Translates to: QGEQNISSATAEGTAYLCTVSIS*SSLEGR
Trigger: CCGTCCTTCTAATGAAGACAATGATATTGACACTGT...GCATAGGTAAGCTGTGCCTTCAGCTGTTGCAGATGAAATGTTCTGTTCACCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp AAGCCTGGTCAGCCCACGCCTAAAGCACACACCTGGGGAAATAAATTAGCTATTATTTTCTCCACGTGGTaGATAATTGTCTTCAGTTGC +
Preference number: 5 (lower is better)
Translates to: KPGQPTPKAHTWGNKLAIIFSTW*IIVFSC
Trigger: GCAACTGAAGACAATTATCAACCACGTGGAGAAAAT...AATAGCTAATTTATTTCCCCAGGTGTGTGCTTTAGGCGTGGGCTGACCAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp ATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGACTCTGTCAATCTCTTaGCACCTCCATTTGTTCATC +
Preference number: 5 (lower is better)
Translates to: ITTMFHTALLGLIFSTWLTLSIS*HLHLFI
Trigger: GATGAACAAATGGAGGTGCAAAGAGATTGACAGAGT...CAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACATGGTTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp AAGCCTGGTCAGCCCACGCCTAAAGCACACACCTGGGGAAATAAATTAGCTATTGTTGAATTGCATTTCTaGAGTATCTGGAGAGGATGT +
Preference number: 5 (lower is better)
Translates to: KPGQPTPKAHTWGNKLAIVELHF*SIWRGC
Trigger: ACATCCTCTCCAGATACTCAAGAAATGCAATTCAAC...AATAGCTAATTTATTTCCCCAGGTGTGTGCTTTAGGCGTGGGCTGACCAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp CTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAACAAACGGCTGTCTGCCAAACTGTGCCAATTGTTTaGTCAAATGCAGTTACCCAC +
Preference number: 5 (lower is better)
Translates to: LLPSNNYQSHVEQTAVCQTVPIV*SNAVTH
Trigger: GTGGGTAACTGCATTTGACAAAACAATTGGCACAGT...TTGGCAGACAGCCGTTTGTTCTACATGGCTTTGATAATTGTTTGAGGGGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp TCAGTGTTCGCAGTCGCATATTACAACCATGTTTCACACAGCCCTGCTCGGTTTTTTGCATTAGTGGGATaGGTGATGTTCTCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: SVFAVAYYNHVSHSPARFFALVG*VMFSEE
Trigger: TTCTTCTGAGAACATCACCAATCCCACTAATGCAAA...AAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp TTGATCTTCCATGAGTGTCTCAAAAAGTTCCCCTCAGAAGTTTCAGCCAAGGGAGGATTGTCGTTGCCCTaGTTAATGAGGTTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: LIFHECLKKFPSEVSAKGGLSLP*LMRFLC
Trigger: ACAGAGAAACCTCATTAACAAGGGCAACGACAATCC...TCCCTTGGCTGAAACTTCTGAGGGGAACTTTTTGAGACACTCATGGAAGATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp TCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGTGATAAGCTGGGAGGTAAGTTaGCCAGGTTCACTTCTGATG +
Preference number: 5 (lower is better)
Translates to: SNEISIGCQATVRNCIVISWEVS*PGSLLM
Trigger: CATCAGAAGTGAACCTGGCAAACTTACCTCCCAGCT...TATCACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp TGTTTCTGCAGGTTAACCTGTATGCTACGCTCAGTCATATACCTTTCAAAGTTATTCCTCAAGCTTTCCTaGCCTTCCAGCCACTGCAAA +
Preference number: 5 (lower is better)
Translates to: CFCRLTCMLRSVIYLSKLFLKLS*PSSHCK
Trigger: TTTGCAGTGGCTGGAAGGCAAGGAAAGCTTGAGGAA...TAACTTTGAAAGGTATATGACTGAGCGTAGCATACAGGTTAACCTGCAGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp TCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGTGATAGCAGGAGCTCCATTCTaGTTTGCCACTCTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: SNEISIGCQATVRNCIVIAGAPF*FATLLL
Trigger: CAAAAGGAGAGTGGCAAACAAGAATGGAGCTCCTGC...TATCACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp TCTTCTCCACATTTCCCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATAGGACAGAACTGTCATaGCAGGATTTGAAGATGAAG +
Preference number: 5 (lower is better)
Translates to: SSPHFPKTNQRETPHCFHRTELS*QDLKMK
Trigger: CTTCATCTTCAAATCCTGCAATGACAGTTCTGTCCT...ATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGGGAAATGTGGAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp ATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGTTAAGGTTAAGGACCTaGACGTGGGAAGATTATTCT +
Preference number: 5 (lower is better)
Translates to: ITTMFHTALLGLIFSTWLLRLRT*TWEDYS
Trigger: AGAATAATCTTCCCACGTCAAGGTCCTTAACCTTAA...CAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACATGGTTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp GACTCCACATTGTTTCCATCTCCTCCCCTCAAACAATTATCAAAGCCATGTAGACCTCTGGATTTTATTTaGTTCAGCGTCAAGGCCCTA +
Preference number: 5 (lower is better)
Translates to: DSTLFPSPPLKQLSKPCRPLDFI*FSVKAL
Trigger: TAGGGCCTTGACGCTGAACAAAATAAAATCCAGAGG...TCTACATGGCTTTGATAATTGTTTGAGGGGAGGAGATGGAAACAATGTGGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp ACCTCATGCTGTCAAGCCAGAGGGGAAACTTACTGGGAAGAAGATGTAGGAAGAGCTAGTACTTCCTTTTaGATTGGATACTGTAGTTCT +
Preference number: 5 (lower is better)
Translates to: TSCCQARGETYWEEDVGRASTSF*IGYCSS
Trigger: AGAACTACAGTATCCAATCAAAAAGGAAGTACTAGC...TCTTCCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp ATTACAACCATGTTTCACACAGCCCTGCTCGGTTTGATTTTCTCCACGTGGTTGATGTGGCTCTGCCATTaGAATATAATCACCGAGAAT +
Preference number: 5 (lower is better)
Translates to: ITTMFHTALLGLIFSTWLMWLCH*NIITEN
Trigger: ATTCTCGGTGATTATATTCAAATGGCAGAGCCACAT...CAACCACGTGGAGAAAATCAAACCGAGCAGGGCTGTGTGAAACATGGTTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS CCA 90 bp CAGTCTGGTTGTTGGTTATCTTGTGAATTTCTCGGTGCACATGGATaGTATTATTTCCAACCTTCGTGTCTGTGTTGGTCTCATTGTGAT +
Preference number: 5 (lower is better)
Translates to: QSGCWLSCEFLGAHG*YYFQPSCLCWSHCD
Trigger: ATCACAATGAGACCAACACAGACACGAAGGTTGGAAATAATACCATCCATGTGCACCGAGAAATTCACAAGATAACCAACAACCAGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000526218.5
ENST00000531309.1
ENST00000532873.5
ENST00000533813.5
ENST00000683431.1
CDS-3UTR CAA 90 bp CTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAACAAACGGCTGTCTGCCAAGATGTGAGAATTAGTTaGACCTTAATTCCAGATGTG +
Preference number: 5 (lower is better)
Translates to: LLPSNNYQSHVEQTAVCQDVRIS*TLIPDV
Trigger: CACATCTGGAATTAAGGTCAAACTAATTCTCACATC...TTGGCAGACAGCCGTTTGTTCTACATGGCTTTGATAATTGTTTGAGGGGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp CTCCTCCCCTCAAACAATTATCAAAGCCATGTAGAACAAACGGCTGTCTGCCAAAGTTGGGTGGCAAATTaGCTTCTATGGAAGATTTTT +
Preference number: 5 (lower is better)
Translates to: LLPSNNYQSHVEQTAVCQSWVAN*LLWKIF
Trigger: AAAAATCTTCCATAGAAGCAAATTTGCCACCCAACT...TTGGCAGACAGCCGTTTGTTCTACATGGCTTTGATAATTGTTTGAGGGGAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp TCTTCTCCACATTTCCCCAAAACCAATCAGAGGGAGACTCCACATTGTTTCCATCATAGCATTGCAGTGTaGTTACTAAATCTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: SSPHFPKTNQRETPHCFHHSIAV*LLNLEV
Trigger: CACTTCCAGATTTAGTAACAACACTGCAATGCTATG...ATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGGGAAATGTGGAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS CCA 90 bp TTCTCAATTGTAGTTTGGGCTTGTGAATTTCTCGGTGCACATGGATaGTATTATTTCCAACCTTCGTGTCTGTGTTGGTCTCATTGTGAT +
Preference number: 5 (lower is better)
Translates to: FSIVVWACEFLGAHG*YYFQPSCLCWSHCD
Trigger: ATCACAATGAGACCAACACAGACACGAAGGTTGGAAATAATACCATCCATGTGCACCGAGAAATTCACAAGCCCAAACTACAATTGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533900.1
CDS-3UTR CAA 90 bp TATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGAGCAACTCCTAACAGCATaGGTGCTCCCTCATGAAATT +
Preference number: 5 (lower is better)
Translates to: YATLSHIPFKVTNATAKEQLLTA*VLPHEI
Trigger: AATTTCATGAGGGAGCACCAATGCTGTTAGGAGTTG...CTCTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp TGTTTCTGCAGGTTAACCTGTATGCTACGCTCAGTCATATACCTTTCAAAGTTAATGATCTCTTATCTTTaGAGGCTGAGGCAGGTCACA +
Preference number: 5 (lower is better)
Translates to: CFCRLTCMLRSVIYLSKLMISYL*RLRQVT
Trigger: TGTGACCTGCCTCAGCCTCAAAAGATAAGAGATCAT...TAACTTTGAAAGGTATATGACTGAGCGTAGCATACAGGTTAACCTGCAGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp TCCAATGAAATAAGCATTGGTTGCCAGGCCACAGTTAGGAATTGTATTGTGATACCCATAGGATTGTCGTaGCCCTTGTTAATGAGGTTT +
Preference number: 5 (lower is better)
Translates to: SNEISIGCQATVRNCIVIPIGLS*PLLMRF
Trigger: AAACCTCATTAACAAGGGCAACGACAATCCTATGGG...TATCACAATACAATTCCTAACTGTGGCCTGGCAACCAATGCTTATTTCATTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp AACATTTTGGTCACTAGTAGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGCCAATGGGCCACTGTTTaGACTCGGAATCATGTTGTG +
Preference number: 5 (lower is better)
Translates to: NILVTSSQNLIRPYVLKGQWATV*TRNHVV
Trigger: CACAACATGATTCCGAGTCAAAACAGTGGCCCATTG...GCCTTTCAGGACATATGGCCTTATAAGATTTTGACTACTAGTGACCAAAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS CCA 90 bp AGTCAACATGTCTGGTACTTGCTTGTACCCCTTTCAAAGCTGAGATaGGCCATGCAAATGACCACTCAATTTAATTTATCTGTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: SQHVWYLLVPLSKLR*AMQMTTQFNLSVVS
Trigger: AGAAACAACAGATAAATTAAATTGAGTGGTCATTTGCATGGCCCATCTCAGCTTTGAAAGGGGTACAAGCAAGTACCAGACATGTTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531309.1
CDS-3UTR CAA 90 bp AACATTTTGGTCACTAGTAGTCAAAATCTTATAAGGCCATATGTCCTGAAAGGCGAAGAAAAGAAATTCTaGGAACCAGCCGTAACCCAG +
Preference number: 5 (lower is better)
Translates to: NILVTSSQNLIRPYVLKGEEKKF*EPAVTQ
Trigger: CTGGGTTACGGCTGGTTCCAAGAATTTCTTTTCTTC...GCCTTTCAGGACATATGGCCTTATAAGATTTTGACTACTAGTGACCAAAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS CCA 90 bp TATCATATTTACATTCCTCCTTGTGAATTTCTCGGTGCACATGGATaGTATTATTTCCAACCTTCGTGTCTGTGTTGGTCTCATTGTGAT +
Preference number: 5 (lower is better)
Translates to: YHIYIPPCEFLGAHG*YYFQPSCLCWSHCD
Trigger: ATCACAATGAGACCAACACAGACACGAAGGTTGGAAATAATACCATCCATGTGCACCGAGAAATTCACAAGGAGGAATGTAAATATGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530694.5
CDS-3UTR CAA 90 bp TGTATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGACAGTGTCAATATCATaGTCTTCATTAGAAGGACGG +
Preference number: 5 (lower is better)
Translates to: CMLRSVIYLSKLLMQLPKTVSIS*SSLEGR
Trigger: CCGTCCTTCTAATGAAGACAATGATATTGACACTGT...CTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS TCA 90 bp TTTCTCTTTTGGAAATGGGGTATATCATATTTACATTCCTCCTTGTaGATTTCTCGGTGCACATGGATGGTATTATTTCCAACCTTCGTG +
Preference number: 5 (lower is better)
Translates to: FLFWKWGISYLHSSL*ISRCTWMVLFPTFV
Trigger: CACGAAGGTTGGAAATAATACCATCCATGTGCACCGAGAAATTCACAAGGAGGAATGTAAATATGATATACCCCATTTCCAAAAGAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530694.5
CDS-3UTR CAA 90 bp TATGCTACGCTCAGTCATATACCTTTCAAAGTTACTAATGCAACTGCCAAAGAGGATGTGAGAATTAGTTaGACCTTAATTCCAGATGTG +
Preference number: 5 (lower is better)
Translates to: YATLSHIPFKVTNATAKEDVRIS*TLIPDV
Trigger: CACATCTGGAATTAAGGTCAAACTAATTCTCACATC...CTCTTTGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000396505.7
CDS-3UTR CAA 90 bp GAAGGCCGTGAAGCATTTACACTCTTTAAGACAAATTCCCATCCAAAAATAGTTTCTTTGCACCTCCATTaGTTCATCTGTGAAATGAAG +
Preference number: 5 (lower is better)
Translates to: EGREAFTLFKTNSHPKIVSLHLH*FICEMK
Trigger: CTTCATTTCACAGATGAACAAATGGAGGTGCAAAGA...AACTATTTTTGGATGGGAATTTGTCTTAAAGAGTGTAAATGCTTCACGGCCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS-3UTR CAA 90 bp GAAGGCCGTGAAGCATTTACACTCTTTAAGACAAATTCCCATCCAAAAATAGTTGATAATTGTCTTCAGTaGCTGCTAAGTGATTTTGCA +
Preference number: 5 (lower is better)
Translates to: EGREAFTLFKTNSHPKIVDNCLQ*LLSDFA
Trigger: TGCAAAATCACTTAGCAGCAACTGAAGACAATTATC...AACTATTTTTGGATGGGAATTTGTCTTAAAGAGTGTAAATGCTTCACGGCCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS TCA 90 bp CTAGGGTTAAATATATTGCTTAAATGCAAAAGCAGTTTAGGATCCTaGTACATTGTCTCTCCACTTTCAACAGTAACATTACTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: LGLNILLKCKSSLGS*YIVSPLSTVTLLLL
Trigger: CAGAAGGAGTAATGTTACTGTTGAAAGTGGAGAGACAATGTATCAGGATCCTAAACTGCTTTTGCATTTAAGCAATATATTTAACCCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533900.1
ENST00000534479.5
CDS GCA 72 bp GCCCGCAGCCGCCGCCCCGACTGGACCGAGTTGCGCTaGGGGCCGGACTGGATCTGCTCGCTCCCGCCGGGA +
Preference number: 6 (lower is better)
Translates to: ARSRRPDWTELR*GPDWICSLPPG
Trigger: TCCCGGCGGGAGCGAGCAGATCCAGTCCGGCCCGCAGCGCAACTCGGTCCAGTCGGGGCGGCGGCTGCGGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000534479.5
CDS CCA 72 bp CGCCCCGACTGGACCGAGTTGCGCTGCGGGCCGGACTaGATCTGCTCGCTCCCGCCGGGAGGCCGCCGGGCT +
Preference number: 6 (lower is better)
Translates to: RPDWTELRCGPD*ICSLPPGGRRA
Trigger: AGCCCGGCGGCCTCCCGGCGGGAGCGAGCAGATCCAGTCCGGCCCGCAGCGCAACTCGGTCCAGTCGGGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000534479.5
CDS CCA 72 bp CTCCTGCGGGTAGCTGAGAGCCGGGCCGGGCTTGACTaGAGCCGAGGTCGCCGTCGGAGCGGGCGCGGGGGC +
Preference number: 6 (lower is better)
Translates to: LLRVAESRAGLD*SRGRRRSGRGG
Trigger: GCCCCCGCGCCCGCTCCGACGGCGACCTCGGCTCCAGTCAAGCCCGGCCCGGCTCTCAGCTACCCGCAGGAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000526218.5
ENST00000527132.1
ENST00000529338.1
ENST00000530694.5
ENST00000533813.5
ENST00000533900.1
ENST00000534479.5
ENST00000534511.5
ENST00000683431.1
CDS GCA 72 bp TCTGCGCCCGCAGCCGCCGCCCCGACTGGACCGAGTTaGGCTGCGGGCCGGACTGGATCTGCTCGCTCCCGC +
Preference number: 6 (lower is better)
Translates to: SAPAAAAPTGPS*AAGRTGSARSR
Trigger: GCGGGAGCGAGCAGATCCAGTCCGGCCCGCAGCGCAACTCGGTCCAGTCGGGGCGGCGGCTGCGGGCGCAGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000534479.5
CDS CAA 72 bp CTCTGCGCCCGCAGCCGCCGCCCCGACTGGACCGAGTaGCGCTGCGGGCCGGACTGGATCTGCTCGCTCCCG +
Preference number: 6 (lower is better)
Translates to: LCARSRRPDWTE*RCGPDWICSLP
Trigger: CGGGAGCGAGCAGATCCAGTCCGGCCCGCAGCGCAACTCGGTCCAGTCGGGGCGGCGGCTGCGGGCGCAGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326932.8
ENST00000534479.5
CDS GCA 72 bp ACAGCAGGGTGGCCCCAAGCCGCTGCATCTCCGCTCTaGGCCCGCAGCCGCCGCCTGTGTGTCCCGGAACGC +
Preference number: 6 (lower is better)
Translates to: TAGWPQAAASPL*ARSRRLCVPER
Trigger: GCGTTCCGGGACACACAGGCGGCGGCTGCGGGCGCAGAGCGGAGATGCAGCGGCTTGGGGCCACCCTGCTGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527132.1
ENST00000683431.1
CDS GCA 72 bp ACAGCAGGGTGGCCCCAAGCCGCTGCATCTCCGCTCTaGGCCCGCAGCCGCCGCCTTGGTCTTTCCAAGCCA +
Preference number: 6 (lower is better)
Translates to: TAGWPQAAASPL*ARSRRLGLSKP
Trigger: TGGCTTGGAAAGACCAAGGCGGCGGCTGCGGGCGCAGAGCGGAGATGCAGCGGCTTGGGGCCACCCTGCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525493.5
ENST00000526218.5
ENST00000530694.5
CDS CAA 72 bp AAGGCACAGCACAGCCCCGGCTGGCAGTCCCTCTGGTaGTCACAGATGGTCCCATTGCTGCCCCTGGTGGCC +
Preference number: 6 (lower is better)
Translates to: KAQHSPGWQSLW*SQMVPLLPLVA
Trigger: GGCCACCAGGGGCAGCAATGGGACCATCTGTGACAACCAGAGGGACTGCCAGCCGGGGCTGTGCTGTGCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000525927.5
ENST00000528188.5
ENST00000532372.5
ENST00000532873.5
ENST00000533813.5
ENST00000683431.1
CDS CCA 72 bp ACTGTCCCGGGTGCAGAGCATCCTCTGGCCCCGGCATaGCTGGCAGGTGTACTGGAAGCTGGCAAACTGGCA +
Preference number: 6 (lower is better)
Translates to: TVPGAEHPLAPA*LAGVLEAGKLA
Trigger: TGCCAGTTTGCCAGCTTCCAGTACACCTGCCAGCCATGCCGGGGCCAGAGGATGCTCTGCACCCGGGACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000525927.5
ENST00000528188.5
ENST00000532372.5
ENST00000532873.5
ENST00000533813.5
ENST00000534511.5
ENST00000683431.1
CDS CCA 72 bp TGGAAGGCACAGCACAGCCCCGGCTGGCAGTCCCTCTaGTTGTCACAGATGGTCCCATTGCTGCCCCTGGTG +
Preference number: 6 (lower is better)
Translates to: WKAQHSPGWQSL*LSQMVPLLPLV
Trigger: CACCAGGGGCAGCAATGGGACCATCTGTGACAACCAGAGGGACTGCCAGCCGGGGCTGTGCTGTGCCTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000525927.5
ENST00000528188.5
ENST00000532372.5
ENST00000532873.5
ENST00000533813.5
ENST00000683431.1
CDS GCA 72 bp GGTTCAAACCCTAGCCCCTCCTCGACCAGGTCAGAGTaGCCGACCCCCACTTCCACCTCAAGCCTCTCTCAG +
Preference number: 6 (lower is better)
Translates to: GSNPSPSSTRSE*PTPTSTSSLSQ
Trigger: CTGAGAGAGGCTTGAGGTGGAAGTGGGGGTCGGGCACTCTGACCTGGTCGAGGAGGGGCTAGGGTTTGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396505.7
CDS CCA 72 bp TCTGGCCCCGGCATGGCTGGCAGGTGTACTGGAAGCTaGCAAACTGGCAGTACATGCTGGGCCCACAGTCCT +
Preference number: 6 (lower is better)
Translates to: SGPGMAGRCTGS*QTGSTCWAHSP
Trigger: AGGACTGTGGGCCCAGCATGTACTGCCAGTTTGCCAGCTTCCAGTACACCTGCCAGCCATGCCGGGGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000525927.5
ENST00000528188.5
ENST00000532372.5
ENST00000532873.5
ENST00000533813.5
ENST00000534511.5
ENST00000683431.1
CDS CCA 72 bp AGCATCCTCTGGCCCCGGCATGGCTGGCAGGTGTACTaGAAGCTGGCAAACTGGCAGTACATGCTGGGCCCA +
Preference number: 6 (lower is better)
Translates to: SILWPRHGWQVY*KLANWQYMLGP
Trigger: TGGGCCCAGCATGTACTGCCAGTTTGCCAGCTTCCAGTACACCTGCCAGCCATGCCGGGGCCAGAGGATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000525927.5
ENST00000528188.5
ENST00000532372.5
ENST00000532873.5
ENST00000533813.5
ENST00000534511.5
ENST00000683431.1
CDS GCA 72 bp GCTGGCAGTCCCTCTGGTTGTCACAGATGGTCCCATTaGTGCCCCTGGTGGCCATTTTGGTGCAGTGACCCC +
Preference number: 6 (lower is better)
Translates to: AGSPSGCHRWSH*CPWWPFWCSDP
Trigger: GGGGTCACTGCACCAAAATGGCCACCAGGGGCAGCAATGGGACCATCTGTGACAACCAGAGGGACTGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000525927.5
ENST00000528188.5
ENST00000532372.5
ENST00000532873.5
ENST00000533813.5
ENST00000683431.1
CDS CCA 72 bp CGGCATGGCTGGCAGGTGTACTGGAAGCTGGCAAACTaGCAGTACATGCTGGGCCCACAGTCCTCGTCGATG +
Preference number: 6 (lower is better)
Translates to: RHGWQVYWKLAN*QYMLGPQSSSM
Trigger: CATCGACGAGGACTGTGGGCCCAGCATGTACTGCCAGTTTGCCAGCTTCCAGTACACCTGCCAGCCATGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000525927.5
ENST00000528188.5
ENST00000532372.5
ENST00000532873.5
ENST00000533813.5
ENST00000534511.5
ENST00000683431.1
CDS CCA 72 bp GCAGCAGCTGGCTCTCCTGCTAGGTCAGGCAGCAGATaGGGTCCGGGATCCAAAAAGATGGCCAGGCTGAGT +
Preference number: 6 (lower is better)
Translates to: AAAGSPARSGSR*GPGSKKMARLS
Trigger: ACTCAGCCTGGCCATCTTTTTGGATCCCGGACCCCATCTGCTGCCTGACCTAGCAGGAGAGCCAGCTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526218.5
CDS GCA 72 bp GCCTCCATCTCTTCCACCGCGCTGCGCAATTTGTGCTaGGTGTCCTCCATCAGTTCCTCAACCTCGCGGAAC +
Preference number: 6 (lower is better)
Translates to: ASISSTALRNLC*VSSISSSTSRN
Trigger: GTTCCGCGAGGTTGAGGAACTGATGGAGGACACGCAGCACAAATTGCGCAGCGCGGTGGAAGAGATGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000526218.5
ENST00000529338.1
ENST00000530694.5
ENST00000533813.5
ENST00000533900.1
ENST00000534479.5
ENST00000534511.5
ENST00000683431.1
CDS GCA 72 bp TCTGCCTCCATCTCTTCCACCGCGCTGCGCAATTTGTaGTGCGTGTCCTCCATCAGTTCCTCAACCTCGCGG +
Preference number: 6 (lower is better)
Translates to: SASISSTALRNL*CVSSISSSTSR
Trigger: CCGCGAGGTTGAGGAACTGATGGAGGACACGCAGCACAAATTGCGCAGCGCGGTGGAAGAGATGGAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000526218.5
ENST00000529338.1
ENST00000530694.5
ENST00000533813.5
ENST00000533900.1
ENST00000534479.5
ENST00000534511.5
ENST00000683431.1
CDS GCA 72 bp AGGAAAGGCCTCCAGACTCTAGTCGCTCCTGATCCCTaGCTGGCTGCACTGCCCTTCAGCATCTCCATGCCT +
Preference number: 6 (lower is better)
Translates to: RKGLQTLVAPDP*LAALPFSISMP
Trigger: AGGCATGGAGATGCTGAAGGGCAGTGCAGCCAGGCAGGGATCAGGAGCGACTAGAGTCTGGAGGCCTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532372.5
CDS CCA 72 bp CTCGTCGATGATGCACTCCTCATCCTATGCACAATGTaGCAGCAAGGAGGCCAGCGTCCAGCCACCAGCCTG +
Preference number: 6 (lower is better)
Translates to: LVDDALLILCTM*QQGGQRPATSL
Trigger: CAGGCTGGTGGCTGGACGCTGGCCTCCTTGCTGCCACATTGTGCATAGGATGAGGAGTGCATCATCGACGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525927.5
CDS CAA 72 bp CTGCACTGCCCTTCAGCATCTCCATGCCTAGGAGGCTaGGCAGCCCAGAGCCTGGAGGATCCCACACCAAAT +
Preference number: 6 (lower is better)
Translates to: LHCPSASPCLGG*AAQSLEDPTPN
Trigger: ATTTGGTGTGGGATCCTCCAGGCTCTGGGCTGCCAAGCCTCCTAGGCATGGAGATGCTGAAGGGCAGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532372.5
CDS CAA 90 bp CCTGCCTGGCTGCACTGCCCTTCAGCATCTCCATGCCTAGGAGGCTaGGCAGCCCAGAGCCTGGAGGATCCCACACCAAATTCACACAAT +
Preference number: 6 (lower is better)
Translates to: PAWLHCPSASPCLGG*AAQSLEDPTPNSHN
Trigger: ATTGTGTGAATTTGGTGTGGGATCCTCCAGGCTCTGGGCTGCCAAGCCTCCTAGGCATGGAGATGCTGAAGGGCAGTGCAGCCAGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532372.5
CDS TCA 72 bp CGCCGCCTTGGTCTTTCCAAGCCAACCTCTGTCCTGTaGAATCCTCAGGAAAAATCCCAGCCCCCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: RRLGLSKPTSVL*NPQEKSQPPAW
Trigger: CCAGGCTGGGGGCTGGGATTTTTCCTGAGGATTTCACAGGACAGAGGTTGGCTTGGAAAGACCAAGGCGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000525493.5
ENST00000526218.5
ENST00000530694.5
CDS CAA 72 bp TCTTCTGCCTCCATCTCTTCCACCGCGCTGCGCAATTaGTGCTGCGTGTCCTCCATCAGTTCCTCAACCTCG +
Preference number: 6 (lower is better)
Translates to: SSASISSTALRN*CCVSSISSSTS
Trigger: CGAGGTTGAGGAACTGATGGAGGACACGCAGCACAAATTGCGCAGCGCGGTGGAAGAGATGGAGGCAGAAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000526218.5
ENST00000529338.1
ENST00000530694.5
ENST00000533813.5
ENST00000533900.1
ENST00000534479.5
ENST00000534511.5
ENST00000683431.1
CDS CCA 72 bp GAAGCAATCACAGGGGACCAGAGCCTAGCCCTGAAATaGACGGACAGCCTTTTTCCCTTTAGGCCATTGGGC +
Preference number: 6 (lower is better)
Translates to: EAITGDQSLALK*TDSLFPFRPLG
Trigger: GCCCAATGGCCTAAAGGGAAAAAGGCTGTCCGTCCATTTCAGGGCTAGGCTCTGGTCCCCTGTGATTGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531309.1
CDS TCA 72 bp GCAGATGGGGTCCGGGATCCAAAAAGATGGCCAGGCTaGGTATCCCACGGTAACAAGAGCAGCTCATCCTAT +
Preference number: 6 (lower is better)
Translates to: ADGVRDPKRWPG*VSHGNKSSSSY
Trigger: ATAGGATGAGCTGCTCTTGTTACCGTGGGATACTCAGCCTGGCCATCTTTTTGGATCCCGGACCCCATCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526218.5
CDS TCA 72 bp GAAAGTGAGTGTGTCGGGGTGCAAGTACAGGGGAAATaGCAACTTACGTGGCTCCTTCTGCCTTCTTCGTCT +
Preference number: 6 (lower is better)
Translates to: ESECVGVQVQGK*QLTWLLLPSSS
Trigger: AGACGAAGAAGGCAGAAGGAGCCACGTAAGTTGTCATTTCCCCTGTACTTGCACCCCGACACACTCACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531309.1
CDS CCA 72 bp ATAATTGTTCAGAAAGCTGCTCCAGCCGAGGGGCCCTaGAGAAGGCTGAGGGTTGCACAAATTCAGTCAACA +
Preference number: 6 (lower is better)
Translates to: IIVQKAAPAEGP*RRLRVAQIQST
Trigger: TGTTGACTGAATTTGTGCAACCCTCAGCCTTCTCCAGGGCCCCTCGGCTGGAGCAGCTTTCTGAACAATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525927.5
CDS GCA 72 bp CATTGGGCTCCACATAAGGTGTTCTTGTTCTCAAACTaGCTGACCAGAGGTGGGATTACAAAAGGGGTAGCC +
Preference number: 6 (lower is better)
Translates to: HWAPHKVFLFSN*LTRGGITKGVA
Trigger: GGCTACCCCTTTTGTAATCCCACCTCTGGTCAGGCAGTTTGAGAACAAGAACACCTTATGTGGAGCCCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531309.1
CDS CAA 72 bp GTCTGTCACCAAAGTCCCAGTCAACATGTCTGGTACTaGCTTGTACCCCTTTCAAAGCTGAGATGGGCCATG +
Preference number: 6 (lower is better)
Translates to: VCHQSPSQHVWY*LVPLSKLRWAM
Trigger: CATGGCCCATCTCAGCTTTGAAAGGGGTACAAGCAAGTACCAGACATGTTGACTGGGACTTTGGTGACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531309.1
CDS CCA 72 bp TACCAGGTCTGTCACCAAAGTCCCAGTCAACATGTCTaGTACTTGCTTGTACCCCTTTCAAAGCTGAGATGG +
Preference number: 6 (lower is better)
Translates to: YQVCHQSPSQHV*YLLVPLSKLRW
Trigger: CCATCTCAGCTTTGAAAGGGGTACAAGCAAGTACCAGACATGTTGACTGGGACTTTGGTGACAGACCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531309.1
CDS CAA 90 bp ATATACCAGGTCTGTCACCAAAGTCCCAGTCAACATGTCTGGTACTaGCTTGTACCCCTTTCAAAGCTGAGATGGGCCATGCAAATGACC +
Preference number: 6 (lower is better)
Translates to: IYQVCHQSPSQHVWY*LVPLSKLRWAMQMT
Trigger: GGTCATTTGCATGGCCCATCTCAGCTTTGAAAGGGGTACAAGCAAGTACCAGACATGTTGACTGGGACTTTGGTGACAGACCTGGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531309.1
CDS GCA 72 bp TCAGGTCAGAATGGGAATGAACCTGGTTGTTCTTCATaGATGATGTTAGACCAAGAGGCACTCAGACAGGTG +
Preference number: 6 (lower is better)
Translates to: SGQNGNEPGCSS*MMLDQEALRQV
Trigger: CACCTGTCTGAGTGCCTCTTGGTCTAACATCATGCATGAAGAACAACCAGGTTCATTCCCATTCTGACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530694.5
CDS CCA 72 bp CAACCTTCGTGTCTGTGTTGGTCTCATTGTGATAGCTaGGAGGTAAGTTTGCCAGGTTCACTTCTGATGATG +
Preference number: 6 (lower is better)
Translates to: QPSCLCWSHCDS*EVSLPGSLLMM
Trigger: CATCATCAGAAGTGAACCTGGCAAACTTACCTCCCAGCTATCACAATGAGACCAACACAGACACGAAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000526218.5
ENST00000529338.1
ENST00000530694.5
ENST00000531309.1
ENST00000532873.5
ENST00000533813.5
ENST00000533900.1
ENST00000534479.5
ENST00000534511.5
ENST00000683431.1
CDS CCA 72 bp AAATTAGCTATTTCTATTGCACATCTACCCACAGCCTaGTCCAGATCTAAATCTCTTCCCCTCCCAGCAGTG +
Preference number: 6 (lower is better)
Translates to: KLAISIAHLPTA*SRSKSLPLPAV
Trigger: CACTGCTGGGAGGGGAAGAGATTTAGATCTGGACCAGGCTGTGGGTAGATGTGCAATAGAAATAGCTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000683431.1
CDS TCA 72 bp GCCTTCTTCGTCTCCCACAGATGTGATAACTGTCTCTaGAAAGACCATTTGTCCAGTCTGGTTGTTGGTTAT +
Preference number: 6 (lower is better)
Translates to: AFFVSHRCDNCL*KDHLSSLVVGY
Trigger: ATAACCAACAACCAGACTGGACAAATGGTCTTTTCAGAGACAGTTATCACATCTGTGGGAGACGAAGAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000526218.5
ENST00000531309.1
ENST00000532873.5
ENST00000533813.5
ENST00000683431.1
CDS CCA 72 bp CATGGATGGTATTATTTCCAACCTTCGTGTCTGTGTTaGTCTCATTGTGATAGCTGGGAGGTAAGTTTGCCA +
Preference number: 6 (lower is better)
Translates to: HGWYYFQPSCLC*SHCDSWEVSLP
Trigger: TGGCAAACTTACCTCCCAGCTATCACAATGAGACCAACACAGACACGAAGGTTGGAAATAATACCATCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000526218.5
ENST00000529338.1
ENST00000530694.5
ENST00000531309.1
ENST00000532873.5
ENST00000533813.5
ENST00000533900.1
ENST00000534479.5
ENST00000534511.5
ENST00000683431.1
CDS CCA 72 bp GTAGTTTGGGCTTGTGAATTTCTCGGTGCACATGGATaGTATTATTTCCAACCTTCGTGTCTGTGTTGGTCT +
Preference number: 6 (lower is better)
Translates to: VVWACEFLGAHG*YYFQPSCLCWS
Trigger: AGACCAACACAGACACGAAGGTTGGAAATAATACCATCCATGTGCACCGAGAAATTCACAAGCCCAAACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533900.1
CDS CCA 72 bp TACATTCCTCCTTGTGAATTTCTCGGTGCACATGGATaGTATTATTTCCAACCTTCGTGTCTGTGTTGGTCT +
Preference number: 6 (lower is better)
Translates to: YIPPCEFLGAHG*YYFQPSCLCWS
Trigger: AGACCAACACAGACACGAAGGTTGGAAATAATACCATCCATGTGCACCGAGAAATTCACAAGGAGGAATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530694.5
CDS CCA 72 bp CATGACTTACCTTGTGAATTTCTCGGTGCACATGGATaGTATTATTTCCAACCTTCGTGTCTGTGTTGGTCT +
Preference number: 6 (lower is better)
Translates to: HDLPCEFLGAHG*YYFQPSCLCWS
Trigger: AGACCAACACAGACACGAAGGTTGGAAATAATACCATCCATGTGCACCGAGAAATTCACAAGGTAAGTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534479.5
CDS CCA 72 bp TGTTGGTTATCTTGTGAATTTCTCGGTGCACATGGATaGTATTATTTCCAACCTTCGTGTCTGTGTTGGTCT +
Preference number: 6 (lower is better)
Translates to: CWLSCEFLGAHG*YYFQPSCLCWS
Trigger: AGACCAACACAGACACGAAGGTTGGAAATAATACCATCCATGTGCACCGAGAAATTCACAAGATAACCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326932.8
ENST00000396505.7
ENST00000525493.5
ENST00000526218.5
ENST00000531309.1
ENST00000532873.5
ENST00000533813.5
ENST00000683431.1
CDS CCA 72 bp GTCTGGTACTTGCTTGTACCCCTTTCAAAGCTGAGATaGGCCATGCAAATGACCACTCAATTTAATTTATCT +
Preference number: 6 (lower is better)
Translates to: VWYLLVPLSKLR*AMQMTTQFNLS
Trigger: AGATAAATTAAATTGAGTGGTCATTTGCATGGCCCATCTCAGCTTTGAAAGGGGTACAAGCAAGTACCAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531309.1
CDS TCA 72 bp TGGAAATGGGGTATATCATATTTACATTCCTCCTTGTaGATTTCTCGGTGCACATGGATGGTATTATTTCCA +
Preference number: 6 (lower is better)
Translates to: WKWGISYLHSSL*ISRCTWMVLFP
Trigger: TGGAAATAATACCATCCATGTGCACCGAGAAATTCACAAGGAGGAATGTAAATATGATATACCCCATTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530694.5
CDS TCA 72 bp AATCTGCCAGAGAATTTTGAACGCACAACCAGCAAATaGATGTTTAATTTTGTAGCAATAGAGGGTTTCTCT +
Preference number: 6 (lower is better)
Translates to: NLPENFERTTSK*MFNFVAIEGFS
Trigger: AGAGAAACCCTCTATTGCTACAAAATTAAACATTCATTTGCTGGTTGTGCGTTCAAAATTCTCTGGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530694.5
ENST00000534479.5