Pregenerated sensors for DKK1 (Homo sapiens)
Ensembl gene IDs: ENSG00000107984Ensembl transcript IDs: ENST00000373970.4, ENST00000467359.5, ENST00000476752.1, ENST00000494277.5
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGGGAGTTCCATAAAGAAACAAAGCTCTTACACTCCAGGTTTTTaGAAGGTGTTATTGGAATGCTTAACTGAAACCACAGAACTTGTA | + |
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Preference number: 1 (lower is better) Translates to: QGSSIKKQSSYTPGF*KVLLECLTETTELV Trigger: TACAAGTTCTGTGGTTTCAGTTAAGCATTCCAATAACACCTTCCAAAAACCTGGAGTGTAAGAGCTTTGTTTCTTTATGGAACTCCCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| 3UTR GCA 90 bp | ATGTTACATTTTAGGTACCTATCATTTGTCATTCCAAGAGATCCTTaGGTTCTAGACTCTAGAATTAAATGGGGTAAAGGGTTATGCTTT | + |
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Preference number: 1 (lower is better) Translates to: MLHFRYLSFVIPRDP*VLDSRIKWGKGLCF Trigger: AAAGCATAACCCTTTACCCCATTTAATTCTAGAGTCTAGAACGCAAGGATCTCTTGGAATGACAAATGATAGGTACCTAAAATGTAACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| 3UTR-3UTR CCA 90 bp | TGTAGAACACACACATACGTACACACACACAAACCTCTAAGATCACAATCCCAATACACTCCAGGTTTTTaGAAGGTGTTATTGGAATGC | + |
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Preference number: 2 (lower is better) Translates to: CRTHTYVHTHKPLRSQSQYTPGF*KVLLEC Trigger: GCATTCCAATAACACCTTCCAAAAACCTGGAGTGTA...TTGGGATTGTGATCTTAGAGGTTTGTGTGTGTGTACGTATGTGTGTGTTCTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| 3UTR-3UTR GCA 90 bp | TGTAGAACACACACATACGTACACACACACAAACCTCTAAGATCACAATCCCAAAGGAAAAATAGGCAGTaGAGCACCTTTAGAAAAATA | + |
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Preference number: 2 (lower is better) Translates to: CRTHTYVHTHKPLRSQSQRKNRQ*STFRKI Trigger: TATTTTTCTAAAGGTGCTGCACTGCCTATTTTTCCT...TTGGGATTGTGATCTTAGAGGTTTGTGTGTGTGTACGTATGTGTGTGTTCTACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| 3UTR-3UTR CAA 90 bp | ATTCCAAGAGATCCTTGCGTTCTAGACTCTAGAATTAAATGGGGTAAAGGGTTAATCCTTAGGATTGAGTaGATGAAGGTCATAAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: IPRDPCVLDSRIKWGKGLILRIE*MKVIKG Trigger: ACCTTTTATGACCTTCATCAACTCAATCCTAAGGAT...TAACCCTTTACCCCATTTAATTCTAGAGTCTAGAACGCAAGGATCTCTTGGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| 3UTR TCA 72 bp | TCCAGGTTTTTGGAAGGTGTTATTGGAATGCTTAACTaGAACCACAGAACTTGTATATCCTTAGGATTGAGT | + |
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Preference number: 3 (lower is better) Translates to: SRFLEGVIGMLN*NHRTCISLGLS Trigger: ACTCAATCCTAAGGATATACAAGTTCTGTGGTTTCAGTTAAGCATTCCAATAACACCTTCCAAAAACCTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| 3UTR CCA 72 bp | TCCATAAAGAAACAAAGCTCTTACACTCCAGGTTTTTaGAAGGTGTTATTGGAATGCTTAACTGAAACCACA | + |
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Preference number: 3 (lower is better) Translates to: SIKKQSSYTPGF*KVLLECLTETT Trigger: TGTGGTTTCAGTTAAGCATTCCAATAACACCTTCCAAAAACCTGGAGTGTAAGAGCTTTGTTTCTTTATGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| 3UTR TCA 72 bp | GAAAGTAGTAATGTAAGATTCACTCTCATTCTGCCATaGTCATTTGAGTTTATCAATGCAGAACACGTCTTT | + |
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Preference number: 3 (lower is better) Translates to: ESSNVRFTLILP*SFEFINAEHVF Trigger: AAAGACGTGTTCTGCATTGATAAACTCAAATGATCATGGCAGAATGAGAGTGAATCTTACATTACTACTTTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR GCA 90 bp | CAATCACAGGGGAGTTCCATAAAGAAACAAAGCTCTTACACTCCAGGTTTTTGGACTGCAGAGCCTGGGTaGCCCGCAGCGCCGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QSQGSSIKKQSSYTPGFWTAEPG*PAAPPS Trigger: GCTGGGCGGCGCTGCGGGGCACCCAGGCTCTGCAGT...CCAAAAACCTGGAGTGTAAGAGCTTTGTTTCTTTATGGAACTCCCCTGTGATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR TCA 90 bp | TGTAGAACACACACATACGTACACACACACAAACCTCTAAGATCACAATCCCAATTCCCGGCGCGGCGCTaGCTGCAGAGCCTGGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: CRTHTYVHTHKPLRSQSQFPARR*LQSLGA Trigger: GGCACCCAGGCTCTGCAGTCAGCGCCGCGCCGGGAA...TTGGGATTGTGATCTTAGAGGTTTGTGTGTGTGTACGTATGTGTGTGTTCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CCA 90 bp | TGTAGAACACACACATACGTACACACACACAAACCTCTAAGATCACAATCCCAAGCTGACTGCAGAGCCTaGGTGCCCCGCAGCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: CRTHTYVHTHKPLRSQSQADCRA*VPRSAA Trigger: GGCGGCGCTGCGGGGCACCCAGGCTCTGCAGTCAGC...TTGGGATTGTGATCTTAGAGGTTTGTGTGTGTGTACGTATGTGTGTGTTCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CCA 90 bp | TGTAGAACACACACATACGTACACACACACAAACCTCTAAGATCACAATCCCAAACTCCCAGCAGAGGGTaGCCGCCGAGAGCCGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: CRTHTYVHTHKPLRSQSQTPSRG*PPRAAA Trigger: AGCGGCGGCTCTCGGCGGCCACCCTCTGCTGGGAGT...TTGGGATTGTGATCTTAGAGGTTTGTGTGTGTGTACGTATGTGTGTGTTCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR GCA 90 bp | GGGAGTTCCATAAAGAAACAAAGCTCTTACACTCCAGGTTTTTGGAAGGTGTTAGGTCCGGGAGCCCCCTaGGGTCCCAGAGTCCTGACT | + |
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Preference number: 4 (lower is better) Translates to: GSSIKKQSSYTPGFWKVLGPGAP*GPRVLT Trigger: AGTCAGGACTCTGGGACCGCAGGGGGCTCCCGGACC...TAACACCTTCCAAAAACCTGGAGTGTAAGAGCTTTGTTTCTTTATGGAACTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR GCA 90 bp | TGTAGAACACACACATACGTACACACACACAAACCTCTAAGATCACAATCCCAACCGTGCCGGTTCGGCTaGAGAGTCAGGGTCCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: CRTHTYVHTHKPLRSQSQPCRFG*RVRVRE Trigger: CTCCCGGACCCTGACTCTGCAGCCGAACCGGCACGG...TTGGGATTGTGATCTTAGAGGTTTGTGTGTGTGTACGTATGTGTGTGTTCTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CCA 90 bp | TGTAGAACACACACATACGTACACACACACAAACCTCTAAGATCACAATCCCAAAGCGCCGCCCAGCGGTaGGGGCAGGTTCTTGATAGC | + |
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Preference number: 4 (lower is better) Translates to: CRTHTYVHTHKPLRSQSQSAAQR*GQVLDS Trigger: GCTATCAAGAACCTGCCCCCACCGCTGGGCGGCGCT...TTGGGATTGTGATCTTAGAGGTTTGTGTGTGTGTACGTATGTGTGTGTTCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR GCA 90 bp | ATTCCAAGAGATCCTTGCGTTCTAGACTCTAGAATTAAATGGGGTAAAGGGTTACCGGGTAGCTCCCGCTaGGCCCAGAGCCATCATCTC | + |
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Preference number: 4 (lower is better) Translates to: IPRDPCVLDSRIKWGKGLPGSSR*AQSHHL Trigger: GAGATGATGGCTCTGGGCGCAGCGGGAGCTACCCGG...TAACCCTTTACCCCATTTAATTCTAGAGTCTAGAACGCAAGGATCTCTTGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR GCA 90 bp | ACTCCAGGTTTTTGGAAGGTGTTATTGGAATGCTTAACTGAAACCACAGAACTTACAGATTTGCACGCCTaGGTCCCCTCCGCGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: TPGFWKVLLECLTETTELTDLHA*VPSAGG Trigger: CCCACCCGCGGAGGGGACGCAGGCGTGCAAATCTGT...AAGTTCTGTGGTTTCAGTTAAGCATTCCAATAACACCTTCCAAAAACCTGGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR GCA 90 bp | ACTCCAGGTTTTTGGAAGGTGTTATTGGAATGCTTAACTGAAACCACAGAACTTGTCCCCACGAAACCGTaGCGGTTCGGCTGCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: TPGFWKVLLECLTETTELVPTKP*RFGCRV Trigger: GACTCTGCAGCCGAACCGGCACGGTTTCGTGGGGAC...AAGTTCTGTGGTTTCAGTTAAGCATTCCAATAACACCTTCCAAAAACCTGGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CCA 90 bp | CAATCACAGGGGAGTTCCATAAAGAAACAAAGCTCTTACACTCCAGGTTTTTGGGTCACTTTGCAAGCCTaGGTCCCCACGAAACCGTGC | + |
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Preference number: 4 (lower is better) Translates to: QSQGSSIKKQSSYTPGFWVTLQA*VPTKPC Trigger: GCACGGTTTCGTGGGGACCCAGGCTTGCAAAGTGAC...CCAAAAACCTGGAGTGTAAGAGCTTTGTTTCTTTATGGAACTCCCCTGTGATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR GCA 90 bp | TGTAGAACACACACATACGTACACACACACAAACCTCTAAGATCACAATCCCAATCCCAGAGTCCTGACTaGAGGGAGCACAGAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: CRTHTYVHTHKPLRSQSQSQSPD*REHRAL Trigger: CAGAGCTCTGTGCTCCCTGCAGTCAGGACTCTGGGA...TTGGGATTGTGATCTTAGAGGTTTGTGTGTGTGTACGTATGTGTGTGTTCTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR GCA 90 bp | AAACAAAGCTCTTACACTCCAGGTTTTTGGAAGGTGTTATTGGAATGCTTAACTGCACTCCTCGTCCTCTaGGCACGGGTACGGCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: KQSSYTPGFWKVLLECLTALLVL*ARVRLV Trigger: TACCAGCCGTACCCGTGCGCAGAGGACGAGGAGTGC...AGTTAAGCATTCCAATAACACCTTCCAAAAACCTGGAGTGTAAGAGCTTTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR GCA 90 bp | AAACAAAGCTCTTACACTCCAGGTTTTTGGAAGGTGTTATTGGAATGCTTAACTCAGGCGAGACAGATTTaGACGCCTGCGTCCCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: KQSSYTPGFWKVLLECLTQARQI*TPASPP Trigger: CGGAGGGGACGCAGGCGTGCAAATCTGTCTCGCCTG...AGTTAAGCATTCCAATAACACCTTCCAAAAACCTGGAGTGTAAGAGCTTTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR TCA 90 bp | AAACAAAGCTCTTACACTCCAGGTTTTTGGAAGGTGTTATTGGAATGCTTAACTGGGCAGCACATAGCGTaGCGCATGCAGCGTTTTCGG | + |
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Preference number: 4 (lower is better) Translates to: KQSSYTPGFWKVLLECLTGQHIA*RMQRFR Trigger: CCGAAAACGCTGCATGCGTCACGCTATGTGCTGCCC...AGTTAAGCATTCCAATAACACCTTCCAAAAACCTGGAGTGTAAGAGCTTTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR GCA 90 bp | ATTCCAAGAGATCCTTGCGTTCTAGACTCTAGAATTAAATGGGGTAAAGGGTTACGCAGTACTCATCAGTaGCGCACTCCTCGTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: IPRDPCVLDSRIKWGKGLRSTHQ*RTPRPL Trigger: CAGAGGACGAGGAGTGCGGCACTGATGAGTACTGCG...TAACCCTTTACCCCATTTAATTCTAGAGTCTAGAACGCAAGGATCTCTTGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CCA 90 bp | AAACAAAGCTCTTACACTCCAGGTTTTTGGAAGGTGTTATTGGAATGCTTAACTGAACCGAGTTCAAGGTaGCGCTCACTCCCAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: KQSSYTPGFWKVLLECLTEPSSR*RSLPAE Trigger: CTCTGCTGGGAGTGAGCGCCACCTTGAACTCGGTTC...AGTTAAGCATTCCAATAACACCTTCCAAAAACCTGGAGTGTAAGAGCTTTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR GCA 90 bp | ATTCCAAGAGATCCTTGCGTTCTAGACTCTAGAATTAAATGGGGTAAAGGGTTAGTTTTCGGCGCTTCCTaGAGGCGAGACAGATTTGCA | + |
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Preference number: 4 (lower is better) Translates to: IPRDPCVLDSRIKWGKGLVFGAS*RRDRFA Trigger: TGCAAATCTGTCTCGCCTGCAGGAAGCGCCGAAAAC...TAACCCTTTACCCCATTTAATTCTAGAGTCTAGAACGCAAGGATCTCTTGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR TCA 90 bp | TGTAGAACACACACATACGTACACACACACAAACCTCTAAGATCACAATCCCAATGCTTGGTACACACTTaGCCTTCTTTCAGGACAGGT | + |
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Preference number: 4 (lower is better) Translates to: CRTHTYVHTHKPLRSQSQCLVHT*PSFRTG Trigger: ACCTGTCCTGAAAGAAGGTCAAGTGTGTACCAAGCA...TTGGGATTGTGATCTTAGAGGTTTGTGTGTGTGTACGTATGTGTGTGTTCTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CCA 90 bp | ACTCCAGGTTTTTGGAAGGTGTTATTGGAATGCTTAACTGAAACCACAGAACTTGCTGGTAGTTGTCAATaGTCTGGTACTTATTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: TPGFWKVLLECLTETTELAGSCQ*SGTYSR Trigger: GCGGGAATAAGTACCAGACCATTGACAACTACCAGC...AAGTTCTGTGGTTTCAGTTAAGCATTCCAATAACACCTTCCAAAAACCTGGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CCA 90 bp | ATTCCAAGAGATCCTTGCGTTCTAGACTCTAGAATTAAATGGGGTAAAGGGTTAACAAGGTGGTTCTTCTaGAATACCCATCCAAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: IPRDPCVLDSRIKWGKGLTRWFF*NTHPRC Trigger: GCACCTTGGATGGGTATTCCAGAAGAACCACCTTGT...TAACCCTTTACCCCATTTAATTCTAGAGTCTAGAACGCAAGGATCTCTTGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR TCA 90 bp | CAATCACAGGGGAGTTCCATAAAGAAACAAAGCTCTTACACTCCAGGTTTTTGGTACCAAAGCTTTCAGTaGTGGTTTCCTCAATTTCTC | + |
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Preference number: 4 (lower is better) Translates to: QSQGSSIKKQSSYTPGFWYQSFQ*WFPQFL Trigger: GAGAAATTGAGGAAACCATCACTGAAAGCTTTGGTA...CCAAAAACCTGGAGTGTAAGAGCTTTGTTTCTTTATGGAACTCCCCTGTGATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR TCA 90 bp | GGGAGTTCCATAAAGAAACAAAGCTCTTACACTCCAGGTTTTTGGAAGGTGTTACCATCCAAGGTGCTATaGTCATTACCAAAGCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: GSSIKKQSSYTPGFWKVLPSKVL*SLPKLS Trigger: TGAAAGCTTTGGTAATGATCATAGCACCTTGGATGG...TAACACCTTCCAAAAACCTGGAGTGTAAGAGCTTTGTTTCTTTATGGAACTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR GCA 90 bp | ATTCCAAGAGATCCTTGCGTTCTAGACTCTAGAATTAAATGGGGTAAAGGGTTACACATATTCCATTTTTaGAGTAATTCCCGGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: IPRDPCVLDSRIKWGKGLHIFHF*SNSRGS Trigger: GCTGCCCCGGGAATTACTGCAAAAATGGAATATGTG...TAACCCTTTACCCCATTTAATTCTAGAGTCTAGAACGCAAGGATCTCTTGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CCA 90 bp | TGTAGAACACACACATACGTACACACACACAAACCTCTAAGATCACAATCCCAACTGCATTTGGATAGCTaGTTTAGTGTCTCTGACAAG | + |
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Preference number: 4 (lower is better) Translates to: CRTHTYVHTHKPLRSQSQLHLDS*FSVSDK Trigger: CTTGTCAGAGACACTAAACCAGCTATCCAAATGCAG...TTGGGATTGTGATCTTAGAGGTTTGTGTGTGTGTACGTATGTGTGTGTTCTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR GCA 90 bp | GGGAGTTCCATAAAGAAACAAAGCTCTTACACTCCAGGTTTTTGGAAGGTGTTAAATACCCATCCAAGGTaGTATGATCATTACCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: GSSIKKQSSYTPGFWKVLNTHPR*YDHYQS Trigger: GCTTTGGTAATGATCATAGCACCTTGGATGGGTATT...TAACACCTTCCAAAAACCTGGAGTGTAAGAGCTTTGTTTCTTTATGGAACTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CCA 90 bp | ACTCCAGGTTTTTGGAAGGTGTTATTGGAATGCTTAACTGAAACCACAGAACTTGGAGTTCACTGCATTTaGATAGCTGGTTTAGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: TPGFWKVLLECLTETTELGVHCI*IAGLVS Trigger: AGACACTAAACCAGCTATCCAAATGCAGTGAACTCC...AAGTTCTGTGGTTTCAGTTAAGCATTCCAATAACACCTTCCAAAAACCTGGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR TCA 90 bp | ACTCCAGGTTTTTGGAAGGTGTTATTGGAATGCTTAACTGAAACCACAGAACTTAATATTTCTAGTCCATaGGAGCCTTTTCTCCTATGC | + |
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Preference number: 4 (lower is better) Translates to: TPGFWKVLLECLTETTELNISSP*EPFLLC Trigger: GCATAGGAGAAAAGGCTCTCATGGACTAGAAATATT...AAGTTCTGTGGTTTCAGTTAAGCATTCCAATAACACCTTCCAAAAACCTGGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR GCA 90 bp | TGTAGAACACACACATACGTACACACACACAAACCTCTAAGATCACAATCCCAAGCATTTACAGGTAAGTaGCACACTGAGAATTTACAA | + |
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Preference number: 4 (lower is better) Translates to: CRTHTYVHTHKPLRSQSQAFTGK*HTENLQ Trigger: TTGTAAATTCTCAGTGTGGCACTTACCTGTAAATGC...TTGGGATTGTGATCTTAGAGGTTTGTGTGTGTGTACGTATGTGTGTGTTCTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CCA 90 bp | ATTCCAAGAGATCCTTGCGTTCTAGACTCTAGAATTAAATGGGGTAAAGGGTTACTTTTCTCCTATGCTTaGTACACACTTGACCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: IPRDPCVLDSRIKWGKGLLFSYA*YTLDLL Trigger: AAGAAGGTCAAGTGTGTACCAAGCATAGGAGAAAAG...TAACCCTTTACCCCATTTAATTCTAGAGTCTAGAACGCAAGGATCTCTTGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR TCA 90 bp | ATTCCAAGAGATCCTTGCGTTCTAGACTCTAGAATTAAATGGGGTAAAGGGTTATCTGCCATGATCATTTaGGTTTATCAATGCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: IPRDPCVLDSRIKWGKGLSAMII*VYQCRT Trigger: TGTTCTGCATTGATAAACTCAAATGATCATGGCAGA...TAACCCTTTACCCCATTTAATTCTAGAGTCTAGAACGCAAGGATCTCTTGGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR GCA 90 bp | ATTCCAAGAGATCCTTGCGTTCTAGACTCTAGAATTAAATGGGGTAAAGGGTTAATTCCAAGAGATCCTTaGGTTCTAGACTCTAGAATT | + |
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Preference number: 4 (lower is better) Translates to: IPRDPCVLDSRIKWGKGLIPRDP*VLDSRI Trigger: AATTCTAGAGTCTAGAACGCAAGGATCTCTTGGAAT...TAACCCTTTACCCCATTTAATTCTAGAGTCTAGAACGCAAGGATCTCTTGGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR GCA 90 bp | TGTAGAACACACACATACGTACACACACACAAACCTCTAAGATCACAATCCCAAGATTCACTCTCATTCTaGCATGATCATTTGAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: CRTHTYVHTHKPLRSQSQDSLSF*HDHLSL Trigger: TAAACTCAAATGATCATGGCAGAATGAGAGTGAATC...TTGGGATTGTGATCTTAGAGGTTTGTGTGTGTGTACGTATGTGTGTGTTCTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CCA 90 bp | AAACAAAGCTCTTACACTCCAGGTTTTTGGAAGGTGTTATTGGAATGCTTAACTTACACTCCAGGTTTTTaGAAGGTGTTATTGGAATGC | + |
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Preference number: 4 (lower is better) Translates to: KQSSYTPGFWKVLLECLTYTPGF*KVLLEC Trigger: GCATTCCAATAACACCTTCCAAAAACCTGGAGTGTA...AGTTAAGCATTCCAATAACACCTTCCAAAAACCTGGAGTGTAAGAGCTTTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CCA 90 bp | TGTAGAACACACACATACGTACACACACACAAACCTCTAAGATCACAATCCCAAGACTCTAGAATTAAATaGGGTAAAGGGTTATGCTTT | + |
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Preference number: 4 (lower is better) Translates to: CRTHTYVHTHKPLRSQSQDSRIK*GKGLCF Trigger: AAAGCATAACCCTTTACCCCATTTAATTCTAGAGTC...TTGGGATTGTGATCTTAGAGGTTTGTGTGTGTGTACGTATGTGTGTGTTCTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR GCA 90 bp | ATTCCAAGAGATCCTTGCGTTCTAGACTCTAGAATTAAATGGGGTAAAGGGTTAAAGGTGTTATTGGAATaGTTAACTGAAACCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: IPRDPCVLDSRIKWGKGLKVLLE*LTETTE Trigger: TTCTGTGGTTTCAGTTAAGCATTCCAATAACACCTT...TAACCCTTTACCCCATTTAATTCTAGAGTCTAGAACGCAAGGATCTCTTGGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CCA 90 bp | ATTCCAAGAGATCCTTGCGTTCTAGACTCTAGAATTAAATGGGGTAAAGGGTTAAACCTTCTTGTCCTTTaGTGTGATACATTTTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: IPRDPCVLDSRIKWGKGLNLLVL*CDTFLK Trigger: CTTCAAAAATGTATCACACCAAAGGACAAGAAGGTT...TAACCCTTTACCCCATTTAATTCTAGAGTCTAGAACGCAAGGATCTCTTGGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS CCA 90 bp | CCCGCCCGGGTACAGGATTCCCGGCGCGGCGCTGACTGCAGAGCCTaGGTGCCCCGCAGCGCCGCCCAGCGGTGGGGGCAGGTTCTTGAT | + |
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Preference number: 5 (lower is better) Translates to: PARVQDSRRGADCRA*VPRSAAQRWGQVLD Trigger: ATCAAGAACCTGCCCCCACCGCTGGGCGGCGCTGCGGGGCACCCAGGCTCTGCAGTCAGCGCCGCGCCGGGAATCCTGTACCCGGGCGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS GCA 90 bp | CCCGGGTACAGGATTCCCGGCGCGGCGCTGACTGCAGAGCCTGGGTaGCCCGCAGCGCCGCCCAGCGGTGGGGGCAGGTTCTTGATAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PGYRIPGAALTAEPG*PAAPPSGGGRFLIA Trigger: CGCTATCAAGAACCTGCCCCCACCGCTGGGCGGCGCTGCGGGGCACCCAGGCTCTGCAGTCAGCGCCGCGCCGGGAATCCTGTACCCGGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS GCA 90 bp | GTACTTATTCCCGCCCGGGTACAGGATTCCCGGCGCGGCGCTGACTaGAGAGCCTGGGTGCCCCGCAGCGCCGCCCAGCGGTGGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLIPARVQDSRRGAD*RAWVPRSAAQRWGQ Trigger: CTGCCCCCACCGCTGGGCGGCGCTGCGGGGCACCCAGGCTCTGCAGTCAGCGCCGCGCCGGGAATCCTGTACCCGGGCGGGAATAAGTAC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS TCA 90 bp | TCTGGTACTTATTCCCGCCCGGGTACAGGATTCCCGGCGCGGCGCTaGCTGCAGAGCCTGGGTGCCCCGCAGCGCCGCCCAGCGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SGTYSRPGTGFPARR*LQSLGAPQRRPAVG Trigger: CCCCACCGCTGGGCGGCGCTGCGGGGCACCCAGGCTCTGCAGTCAGCGCCGCGCCGGGAATCCTGTACCCGGGCGGGAATAAGTACCAGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS TCA 90 bp | TCCTCTGCGCACGGGTACGGCTGTGGGAAGGGTTCGGGGAGAGGGTaGGGCACCCAGACGTCCAGGTACCCGCCCTCTTGGACCCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSAHGYGCGKGSGRG*GTQTSRYPPSWTRA Trigger: CGCCCGGGTCCAAGAGGGCGGGTACCTGGACGTCTGGGTGCCTCACCCTCTCCCCGAACCCTTCCCACAGCCGTACCCGTGCGCAGAGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467359.5 |
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| CDS CCA 90 bp | CTCATCAGTGCCGCACTCCTCGTCCTCTGCGCACGGGTACGGCTGTaGGAAGGGTTCGGGGAGAGGGTGAGGCACCCAGACGTCCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LISAALLVLCARVRL*EGFGERVRHPDVQV Trigger: TACCTGGACGTCTGGGTGCCTCACCCTCTCCCCGAACCCTTCCCACAGCCGTACCCGTGCGCAGAGGACGAGGAGTGCGGCACTGATGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467359.5 |
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| CDS GCA 90 bp | GCAGCGTTTTCGGCGCTTCCTGCAGGCGAGACAGATTTGCACGCCTaGGTCCCCTCCGCGGGTGGGACTAGCGCAGTACTCATCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AAFSALPAGETDLHA*VPSAGGTSAVLISA Trigger: GGCACTGATGAGTACTGCGCTAGTCCCACCCGCGGAGGGGACGCAGGCGTGCAAATCTGTCTCGCCTGCAGGAAGCGCCGAAAACGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373970.4 ENST00000467359.5 |
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| CDS CCA 90 bp | GGCGCTGACTGCAGAGCCTGGGTGCCCCGCAGCGCCGCCCAGCGGTaGGGGCAGGTTCTTGATAGCGTTGGAATTGAGAACCGAGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GADCRAWVPRSAAQR*GQVLDSVGIENRVQ Trigger: TTGAACTCGGTTCTCAATTCCAACGCTATCAAGAACCTGCCCCCACCGCTGGGCGGCGCTGCGGGGCACCCAGGCTCTGCAGTCAGCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS CCA 90 bp | GAATTGAGAACCGAGTTCAAGGTGGCGCTCACTCCCAGCAGAGGGTaGCCGCCGAGAGCCGCCGCTACCATCGCGACAAAGACCCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ELRTEFKVALTPSRG*PPRAAATIATKTRV Trigger: TACCCGGGTCTTTGTCGCGATGGTAGCGGCGGCTCTCGGCGGCCACCCTCTGCTGGGAGTGAGCGCCACCTTGAACTCGGTTCTCAATTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS GCA 90 bp | GAGAGCCGCCGCTACCATCGCGACAAAGACCCGGGTAGCTCCCGCTaGGCCCAGAGCCATCATCTCAGAAGGACTCAAGAGGGAGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ESRRYHRDKDPGSSR*AQSHHLRRTQEGER Trigger: TCTTTCTCCCTCTTGAGTCCTTCTGAGATGATGGCTCTGGGCGCAGCGGGAGCTACCCGGGTCTTTGTCGCGATGGTAGCGGCGGCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS TCA 90 bp | GAGGCACCCAGACGTCCAGGTACCCGCCCTCTTGGACCCGGGCGCTaGTCACAGTCCTTATCTGTCCACCTCTCCAAAACCTGTTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: EAPRRPGTRPLGPGR*SQSLSVHLSKTCYC Trigger: GCAGTAACAGGTTTTGGAGAGGTGGACAGATAAGGACTGTGATCAGCGCCCGGGTCCAAGAGGGCGGGTACCTGGACGTCTGGGTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467359.5 |
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| CDS TCA 90 bp | TGTTACTGCCCACTGCTCCCAAATGCAGGGTTACCAAATGCTCCCTaGACCGCACACATTCAGCACGTTCTACTCCCTCGTCTCCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: CYCPLLPNAGLPNAP*TAHIQHVLLPRLQI Trigger: TATCTGGAGACGAGGGAGTAGAACGTGCTGAATGTGTGCGGTTCAGGGAGCATTTGGTAACCCTGCATTTGGGAGCAGTGGGCAGTAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467359.5 |
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| CDS GCA 90 bp | CAAAACCTGTTACTGCCCACTGCTCCCAAATGCAGGGTTACCAAATaGTCCCTGAACCGCACACATTCAGCACGTTCTACTCCCTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QNLLLPTAPKCRVTK*SLNRTHSARSTPSS Trigger: AGACGAGGGAGTAGAACGTGCTGAATGTGTGCGGTTCAGGGAGCATTTGGTAACCCTGCATTTGGGAGCAGTGGGCAGTAACAGGTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467359.5 |
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| CDS GCA 90 bp | ATCTGTCCACCTCTCCAAAACCTGTTACTGCCCACTGCTCCCAAATaGAGGGTTACCAAATGCTCCCTGAACCGCACACATTCAGCACGT | + |
|
Preference number: 5 (lower is better) Translates to: ICPPLQNLLLPTAPK*RVTKCSLNRTHSAR Trigger: ACGTGCTGAATGTGTGCGGTTCAGGGAGCATTTGGTAACCCTGCATTTGGGAGCAGTGGGCAGTAACAGGTTTTGGAGAGGTGGACAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467359.5 |
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| CDS GCA 90 bp | CACAGTCCTTATCTGTCCACCTCTCCAAAACCTGTTACTGCCCACTaGTCCCAAATGCAGGGTTACCAAATGCTCCCTGAACCGCACACA | + |
|
Preference number: 5 (lower is better) Translates to: HSPYLSTSPKPVTAH*SQMQGYQMLPEPHT Trigger: TGTGTGCGGTTCAGGGAGCATTTGGTAACCCTGCATTTGGGAGCAGTGGGCAGTAACAGGTTTTGGAGAGGTGGACAGATAAGGACTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467359.5 |
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| CDS-3UTR CAA 90 bp | GGGAGTTCCATAAAGAAACAAAGCTCTTACACTCCAGGTTTTTGGAAGGTGTTAGCAGGCGAGACAGATTaGCACGCCTGCGTCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSSIKKQSSYTPGFWKVLAGETD*HACVPS Trigger: GGAGGGGACGCAGGCGTGCAAATCTGTCTCGCCTGC...TAACACCTTCCAAAAACCTGGAGTGTAAGAGCTTTGTTTCTTTATGGAACTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CAA 90 bp | GGGAGTTCCATAAAGAAACAAAGCTCTTACACTCCAGGTTTTTGGAAGGTGTTAGGTGGGGGCAGGTTCTaGATAGCGTTGGAATTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSSIKKQSSYTPGFWKVLGGGRF*IALELR Trigger: TCTCAATTCCAACGCTATCAAGAACCTGCCCCCACC...TAACACCTTCCAAAAACCTGGAGTGTAAGAGCTTTGTTTCTTTATGGAACTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CAA 90 bp | AAACAAAGCTCTTACACTCCAGGTTTTTGGAAGGTGTTATTGGAATGCTTAACTAAAATGACCGTCACTTaGCAAGCCTGGGTCCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: KQSSYTPGFWKVLLECLTKMTVT*QAWVPT Trigger: CGTGGGGACCCAGGCTTGCAAAGTGACGGTCATTTT...AGTTAAGCATTCCAATAACACCTTCCAAAAACCTGGAGTGTAAGAGCTTTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS CCA 90 bp | AACGCTGGAATATTTCTAGTCCATGAGAGCCTTTTCTCCTATGCTTaGTACACACTTGACCTTCTTTCAGGACAGGTTTACAGATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NAGIFLVHESLFSYA*YTLDLLSGQVYRSW Trigger: CCAAGATCTGTAAACCTGTCCTGAAAGAAGGTCAAGTGTGTACCAAGCATAGGAGAAAAGGCTCTCATGGACTAGAAATATTCCAGCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373970.4 ENST00000476752.1 ENST00000494277.5 |
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| CDS-3UTR CAA 90 bp | CAATCACAGGGGAGTTCCATAAAGAAACAAAGCTCTTACACTCCAGGTTTTTGGAGGTTCTTGATAGCGTaGGAATTGAGAACCGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QSQGSSIKKQSSYTPGFWRFLIA*ELRTEF Trigger: GAACTCGGTTCTCAATTCCAACGCTATCAAGAACCT...CCAAAAACCTGGAGTGTAAGAGCTTTGTTTCTTTATGGAACTCCCCTGTGATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CAA 90 bp | GGGAGTTCCATAAAGAAACAAAGCTCTTACACTCCAGGTTTTTGGAAGGTGTTATTGATAGCGTTGGAATaGAGAACCGAGTTCAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSSIKKQSSYTPGFWKVLLIALE*RTEFKV Trigger: CACCTTGAACTCGGTTCTCAATTCCAACGCTATCAA...TAACACCTTCCAAAAACCTGGAGTGTAAGAGCTTTGTTTCTTTATGGAACTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CAA 90 bp | ATTCCAAGAGATCCTTGCGTTCTAGACTCTAGAATTAAATGGGGTAAAGGGTTAATGCTTGGTACACACTaGACCTTCTTTCAGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: IPRDPCVLDSRIKWGKGLMLGTH*TFFQDR Trigger: CCTGTCCTGAAAGAAGGTCAAGTGTGTACCAAGCAT...TAACCCTTTACCCCATTTAATTCTAGAGTCTAGAACGCAAGGATCTCTTGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CAA 90 bp | GGGAGTTCCATAAAGAAACAAAGCTCTTACACTCCAGGTTTTTGGAAGGTGTTAAGGAGTTCACTGCATTaGGATAGCTGGTTTAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GSSIKKQSSYTPGFWKVLRSSLH*DSWFSV Trigger: GACACTAAACCAGCTATCCAAATGCAGTGAACTCCT...TAACACCTTCCAAAAACCTGGAGTGTAAGAGCTTTGTTTCTTTATGGAACTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS CCA 90 bp | CTTGTCCTTTGGTGTGATACATTTTTGAAGACAAGGTGGTTCTTCTaGAATACCCATCCAAGGTGCTATGATCATTACCAAAGCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LVLWCDTFLKTRWFF*NTHPRCYDHYQSFQ Trigger: CTGAAAGCTTTGGTAATGATCATAGCACCTTGGATGGGTATTCCAGAAGAACCACCTTGTCTTCAAAAATGTATCACACCAAAGGACAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000373970.4 ENST00000476752.1 ENST00000494277.5 |
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| CDS-3UTR CAA 90 bp | ATTCCAAGAGATCCTTGCGTTCTAGACTCTAGAATTAAATGGGGTAAAGGGTTAACAGGTTTACAGATCTaGGACCAGAAGTGTCTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: IPRDPCVLDSRIKWGKGLTGLQI*DQKCLA Trigger: TGCTAGACACTTCTGGTCCAAGATCTGTAAACCTGT...TAACCCTTTACCCCATTTAATTCTAGAGTCTAGAACGCAAGGATCTCTTGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS TCA 90 bp | TGGAATACCCATCCAAGGTGCTATGATCATTACCAAAGCTTTCAGTaGTGGTTTCCTCAATTTCTCCTCGGAAATGATTTTGATCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WNTHPRCYDHYQSFQ*WFPQFLLGNDFDQK Trigger: CTTCTGATCAAAATCATTTCCGAGGAGAAATTGAGGAAACCATCACTGAAAGCTTTGGTAATGATCATAGCACCTTGGATGGGTATTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000373970.4 ENST00000467359.5 ENST00000476752.1 ENST00000494277.5 |
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| CDS-3UTR CAA 90 bp | TGTAGAACACACACATACGTACACACACACAAACCTCTAAGATCACAATCCCAATTACACTCCAGGTTTTaGGAAGGTGTTATTGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: CRTHTYVHTHKPLRSQSQLHSRF*EGVIGM Trigger: CATTCCAATAACACCTTCCAAAAACCTGGAGTGTAA...TTGGGATTGTGATCTTAGAGGTTTGTGTGTGTGTACGTATGTGTGTGTTCTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CAA 90 bp | CAATCACAGGGGAGTTCCATAAAGAAACAAAGCTCTTACACTCCAGGTTTTTGGTTAGGTACCTATCATTaGTCATTCCAAGAGATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QSQGSSIKKQSSYTPGFWLGTYH*SFQEIL Trigger: AAGGATCTCTTGGAATGACAAATGATAGGTACCTAA...CCAAAAACCTGGAGTGTAAGAGCTTTGTTTCTTTATGGAACTCCCCTGTGATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CAA 90 bp | ACTCCAGGTTTTTGGAAGGTGTTATTGGAATGCTTAACTGAAACCACAGAACTTACAAACAGAACCTTCTaGTCCTTTGGTGTGATACAT | + |
|
Preference number: 5 (lower is better) Translates to: TPGFWKVLLECLTETTELTNRTF*SFGVIH Trigger: ATGTATCACACCAAAGGACAAGAAGGTTCTGTTTGT...AAGTTCTGTGGTTTCAGTTAAGCATTCCAATAACACCTTCCAAAAACCTGGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CAA 90 bp | ACTCCAGGTTTTTGGAAGGTGTTATTGGAATGCTTAACTGAAACCACAGAACTTCTGAAACCACAGAACTaGTATATCCTTAGGATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TPGFWKVLLECLTETTELLKPQN*YILRIE Trigger: CTCAATCCTAAGGATATACAAGTTCTGTGGTTTCAG...AAGTTCTGTGGTTTCAGTTAAGCATTCCAATAACACCTTCCAAAAACCTGGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CAA 90 bp | ATTCCAAGAGATCCTTGCGTTCTAGACTCTAGAATTAAATGGGGTAAAGGGTTATCCTCGGAAATGATTTaGATCAGAAGACACACATAT | + |
|
Preference number: 5 (lower is better) Translates to: IPRDPCVLDSRIKWGKGLSSEMI*IRRHTY Trigger: ATATGTGTGTCTTCTGATCAAAATCATTTCCGAGGA...TAACCCTTTACCCCATTTAATTCTAGAGTCTAGAACGCAAGGATCTCTTGGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS-3UTR CAA 90 bp | ATTCCAAGAGATCCTTGCGTTCTAGACTCTAGAATTAAATGGGGTAAAGGGTTAAGAAGAATTACTGGCTaGATGGTGATCTTTCTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: IPRDPCVLDSRIKWGKGLRRITG*MVIFLY Trigger: ATACAGAAAGATCACCATCAAGCCAGTAATTCTTCT...TAACCCTTTACCCCATTTAATTCTAGAGTCTAGAACGCAAGGATCTCTTGGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS CCA 90 bp | AAAGGTTTTCATAGCATCTATTATATAAAAGGAGTTCACTGCATTTaGATAGCTGGTTTAGTGTCTCTGACAAGTGTGAAGCCTAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KGFHSIYYIKGVHCI*IAGLVSLTSVKPRR Trigger: TCTTCTAGGCTTCACACTTGTCAGAGACACTAAACCAGCTATCCAAATGCAGTGAACTCCTTTTATATAATAGATGCTATGAAAACCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373970.4 ENST00000476752.1 |
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| CDS-3UTR CAA 90 bp | AAACAAAGCTCTTACACTCCAGGTTTTTGGAAGGTGTTATTGGAATGCTTAACTTTCTGCCATGATCATTaGAGTTTATCAATGCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KQSSYTPGFWKVLLECLTFCHDH*SLSMQN Trigger: GTTCTGCATTGATAAACTCAAATGATCATGGCAGAA...AGTTAAGCATTCCAATAACACCTTCCAAAAACCTGGAGTGTAAGAGCTTTGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS GCA 72 bp | CCCGCCCGGGTACAGGATTCCCGGCGCGGCGCTGACTaGAGAGCCTGGGTGCCCCGCAGCGCCGCCCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PARVQDSRRGAD*RAWVPRSAAQR Trigger: CCGCTGGGCGGCGCTGCGGGGCACCCAGGCTCTGCAGTCAGCGCCGCGCCGGGAATCCTGTACCCGGGCGGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS GCA 72 bp | AGGATTCCCGGCGCGGCGCTGACTGCAGAGCCTGGGTaGCCCGCAGCGCCGCCCAGCGGTGGGGGCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RIPGAALTAEPG*PAAPPSGGGRF Trigger: GAACCTGCCCCCACCGCTGGGCGGCGCTGCGGGGCACCCAGGCTCTGCAGTCAGCGCCGCGCCGGGAATCCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS CCA 72 bp | GTACAGGATTCCCGGCGCGGCGCTGACTGCAGAGCCTaGGTGCCCCGCAGCGCCGCCCAGCGGTGGGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VQDSRRGADCRA*VPRSAAQRWGQ Trigger: CTGCCCCCACCGCTGGGCGGCGCTGCGGGGCACCCAGGCTCTGCAGTCAGCGCCGCGCCGGGAATCCTGTAC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS GCA 72 bp | CAAGCCTGGGTCCCCACGAAACCGTGCCGGTTCGGCTaGAGAGTCAGGGTCCGGGAGCCCCCTGCGGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: QAWVPTKPCRFG*RVRVREPPAVP Trigger: TGGGACCGCAGGGGGCTCCCGGACCCTGACTCTGCAGCCGAACCGGCACGGTTTCGTGGGGACCCAGGCTTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS TCA 72 bp | CACGGGTACGGCTGTGGGAAGGGTTCGGGGAGAGGGTaGGGCACCCAGACGTCCAGGTACCCGCCCTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: HGYGCGKGSGRG*GTQTSRYPPSW Trigger: CCAAGAGGGCGGGTACCTGGACGTCTGGGTGCCTCACCCTCTCCCCGAACCCTTCCCACAGCCGTACCCGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467359.5 |
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| CDS GCA 72 bp | ACCGTCACTTTGCAAGCCTGGGTCCCCACGAAACCGTaGCGGTTCGGCTGCAGAGTCAGGGTCCGGGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TVTLQAWVPTKP*RFGCRVRVREP Trigger: GGGCTCCCGGACCCTGACTCTGCAGCCGAACCGGCACGGTTTCGTGGGGACCCAGGCTTGCAAAGTGACGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS GCA 72 bp | TCGGCGCTTCCTGCAGGCGAGACAGATTTGCACGCCTaGGTCCCCTCCGCGGGTGGGACTAGCGCAGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: SALPAGETDLHA*VPSAGGTSAVL Trigger: GAGTACTGCGCTAGTCCCACCCGCGGAGGGGACGCAGGCGTGCAAATCTGTCTCGCCTGCAGGAAGCGCCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373970.4 ENST00000467359.5 |
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| CDS GCA 72 bp | CAGCGTTTTCGGCGCTTCCTGCAGGCGAGACAGATTTaGACGCCTGCGTCCCCTCCGCGGGTGGGACTAGCG | + |
|
Preference number: 6 (lower is better) Translates to: QRFRRFLQARQI*TPASPPRVGLA Trigger: CGCTAGTCCCACCCGCGGAGGGGACGCAGGCGTGCAAATCTGTCTCGCCTGCAGGAAGCGCCGAAAACGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373970.4 ENST00000467359.5 |
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| CDS CCA 72 bp | ACCGAGTTCAAGGTGGCGCTCACTCCCAGCAGAGGGTaGCCGCCGAGAGCCGCCGCTACCATCGCGACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TEFKVALTPSRG*PPRAAATIATK Trigger: CTTTGTCGCGATGGTAGCGGCGGCTCTCGGCGGCCACCCTCTGCTGGGAGTGAGCGCCACCTTGAACTCGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS CAA 72 bp | GCAGCGTTTTCGGCGCTTCCTGCAGGCGAGACAGATTaGCACGCCTGCGTCCCCTCCGCGGGTGGGACTAGC | + |
|
Preference number: 6 (lower is better) Translates to: AAFSALPAGETD*HACVPSAGGTS Trigger: GCTAGTCCCACCCGCGGAGGGGACGCAGGCGTGCAAATCTGTCTCGCCTGCAGGAAGCGCCGAAAACGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373970.4 ENST00000467359.5 |
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| CDS GCA 72 bp | AGCGCAGTACTCATCAGTGCCGCACTCCTCGTCCTCTaGGCACGGGTACGGCTGTGGGAAGGGTTCGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SAVLISAALLVL*ARVRLWEGFGE Trigger: CTCCCCGAACCCTTCCCACAGCCGTACCCGTGCGCAGAGGACGAGGAGTGCGGCACTGATGAGTACTGCGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467359.5 |
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| CDS CCA 72 bp | TGCAGAGCCTGGGTGCCCCGCAGCGCCGCCCAGCGGTaGGGGCAGGTTCTTGATAGCGTTGGAATTGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: CRAWVPRSAAQR*GQVLDSVGIEN Trigger: GTTCTCAATTCCAACGCTATCAAGAACCTGCCCCCACCGCTGGGCGGCGCTGCGGGGCACCCAGGCTCTGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS CAA 90 bp | GAGCCTGGGTGCCCCGCAGCGCCGCCCAGCGGTGGGGGCAGGTTCTaGATAGCGTTGGAATTGAGAACCGAGTTCAAGGTGGCGCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: EPGCPAAPPSGGGRF*IALELRTEFKVALT Trigger: AGTGAGCGCCACCTTGAACTCGGTTCTCAATTCCAACGCTATCAAGAACCTGCCCCCACCGCTGGGCGGCGCTGCGGGGCACCCAGGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS CAA 90 bp | GTGACGCATGCAGCGTTTTCGGCGCTTCCTGCAGGCGAGACAGATTaGCACGCCTGCGTCCCCTCCGCGGGTGGGACTAGCGCAGTACTC | + |
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Preference number: 6 (lower is better) Translates to: VTHAAFSALPAGETD*HACVPSAGGTSAVL Trigger: GAGTACTGCGCTAGTCCCACCCGCGGAGGGGACGCAGGCGTGCAAATCTGTCTCGCCTGCAGGAAGCGCCGAAAACGCTGCATGCGTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373970.4 ENST00000467359.5 |
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| CDS CAA 72 bp | AGGGTGAGGCACCCAGACGTCCAGGTACCCGCCCTCTaGGACCCGGGCGCTGATCACAGTCCTTATCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: RVRHPDVQVPAL*DPGADHSPYLS Trigger: GGACAGATAAGGACTGTGATCAGCGCCCGGGTCCAAGAGGGCGGGTACCTGGACGTCTGGGTGCCTCACCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467359.5 |
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| CDS CAA 90 bp | GCAGCGCCGCCCAGCGGTGGGGGCAGGTTCTTGATAGCGTTGGAATaGAGAACCGAGTTCAAGGTGGCGCTCACTCCCAGCAGAGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: AAPPSGGGRFLIALE*RTEFKVALTPSRGW Trigger: CCACCCTCTGCTGGGAGTGAGCGCCACCTTGAACTCGGTTCTCAATTCCAACGCTATCAAGAACCTGCCCCCACCGCTGGGCGGCGCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS CAA 90 bp | TGCCCCGCAGCGCCGCCCAGCGGTGGGGGCAGGTTCTTGATAGCGTaGGAATTGAGAACCGAGTTCAAGGTGGCGCTCACTCCCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: CPAAPPSGGGRFLIA*ELRTEFKVALTPSR Trigger: TCTGCTGGGAGTGAGCGCCACCTTGAACTCGGTTCTCAATTCCAACGCTATCAAGAACCTGCCCCCACCGCTGGGCGGCGCTGCGGGGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS CAA 90 bp | TTCGGGGAGAGGGTGAGGCACCCAGACGTCCAGGTACCCGCCCTCTaGGACCCGGGCGCTGATCACAGTCCTTATCTGTCCACCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: FGERVRHPDVQVPAL*DPGADHSPYLSTSP Trigger: TGGAGAGGTGGACAGATAAGGACTGTGATCAGCGCCCGGGTCCAAGAGGGCGGGTACCTGGACGTCTGGGTGCCTCACCCTCTCCCCGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467359.5 |
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| CDS CAA 72 bp | TGCCCCGCAGCGCCGCCCAGCGGTGGGGGCAGGTTCTaGATAGCGTTGGAATTGAGAACCGAGTTCAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: CPAAPPSGGGRF*IALELRTEFKV Trigger: CACCTTGAACTCGGTTCTCAATTCCAACGCTATCAAGAACCTGCCCCCACCGCTGGGCGGCGCTGCGGGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS CAA 72 bp | GCGCCGCCCAGCGGTGGGGGCAGGTTCTTGATAGCGTaGGAATTGAGAACCGAGTTCAAGGTGGCGCTCACT | + |
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Preference number: 6 (lower is better) Translates to: APPSGGGRFLIA*ELRTEFKVALT Trigger: AGTGAGCGCCACCTTGAACTCGGTTCTCAATTCCAACGCTATCAAGAACCTGCCCCCACCGCTGGGCGGCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS TCA 72 bp | AGACGTCCAGGTACCCGCCCTCTTGGACCCGGGCGCTaGTCACAGTCCTTATCTGTCCACCTCTCCAAAACC | + |
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Preference number: 6 (lower is better) Translates to: RRPGTRPLGPGR*SQSLSVHLSKT Trigger: GGTTTTGGAGAGGTGGACAGATAAGGACTGTGATCAGCGCCCGGGTCCAAGAGGGCGGGTACCTGGACGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467359.5 |
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| CDS GCA 72 bp | AGCGCAGTACTCATCAGTGCCGCACTCCTCGTCCTCTaGGCACGGGTACGGCTGGTAGTTGTCAATGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: SAVLISAALLVL*ARVRLVVVNGL Trigger: CAGACCATTGACAACTACCAGCCGTACCCGTGCGCAGAGGACGAGGAGTGCGGCACTGATGAGTACTGCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS CAA 72 bp | CCCAGCGGTGGGGGCAGGTTCTTGATAGCGTTGGAATaGAGAACCGAGTTCAAGGTGGCGCTCACTCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PSGGGRFLIALE*RTEFKVALTPS Trigger: GCTGGGAGTGAGCGCCACCTTGAACTCGGTTCTCAATTCCAACGCTATCAAGAACCTGCCCCCACCGCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS TCA 72 bp | CCACTGCTCCCAAATGCAGGGTTACCAAATGCTCCCTaGACCGCACACATTCAGCACGTTCTACTCCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: PLLPNAGLPNAP*TAHIQHVLLPR Trigger: ACGAGGGAGTAGAACGTGCTGAATGTGTGCGGTTCAGGGAGCATTTGGTAACCCTGCATTTGGGAGCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467359.5 |
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| CDS CCA 72 bp | AGAAAGAAAGAGAAAATGACCGTCACTTTGCAAGCCTaGGTCCCCACGAAACCGTGCCGGTTCGGCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: RKKEKMTVTLQA*VPTKPCRFGCR Trigger: TCTGCAGCCGAACCGGCACGGTTTCGTGGGGACCCAGGCTTGCAAAGTGACGGTCATTTTCTCTTTCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373970.4 |
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| CDS GCA 72 bp | TTACTGCCCACTGCTCCCAAATGCAGGGTTACCAAATaGTCCCTGAACCGCACACATTCAGCACGTTCTACT | + |
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Preference number: 6 (lower is better) Translates to: LLPTAPKCRVTK*SLNRTHSARST Trigger: AGTAGAACGTGCTGAATGTGTGCGGTTCAGGGAGCATTTGGTAACCCTGCATTTGGGAGCAGTGGGCAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467359.5 |
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| CDS GCA 72 bp | TATCTGTCCACCTCTCCAAAACCTGTTACTGCCCACTaGTCCCAAATGCAGGGTTACCAAATGCTCCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: YLSTSPKPVTAH*SQMQGYQMLPE Trigger: TTCAGGGAGCATTTGGTAACCCTGCATTTGGGAGCAGTGGGCAGTAACAGGTTTTGGAGAGGTGGACAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467359.5 |
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| CDS CAA 90 bp | GGTTTAGTGTCTCTGACAAGTGTGAAGCCTAGAAGAATTACTGGCTaGATGGTGATCTTTCTGTATCCGGCAAGACAGACCTTCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: GLVSLTSVKPRRITG*MVIFLYPARQTFST Trigger: TGTGGAGAAGGTCTGTCTTGCCGGATACAGAAAGATCACCATCAAGCCAGTAATTCTTCTAGGCTTCACACTTGTCAGAGACACTAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373970.4 ENST00000476752.1 |
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| CDS CAA 72 bp | TCCATGAGAGCCTTTTCTCCTATGCTTGGTACACACTaGACCTTCTTTCAGGACAGGTTTACAGATCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: SMRAFSPMLGTH*TFFQDRFTDLG Trigger: TCCAAGATCTGTAAACCTGTCCTGAAAGAAGGTCAAGTGTGTACCAAGCATAGGAGAAAAGGCTCTCATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373970.4 ENST00000476752.1 ENST00000494277.5 |
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| CDS CCA 72 bp | TGGTGTGATACATTTTTGAAGACAAGGTGGTTCTTCTaGAATACCCATCCAAGGTGCTATGATCATTACCAA | + |
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Preference number: 6 (lower is better) Translates to: WCDTFLKTRWFF*NTHPRCYDHYQ Trigger: TTGGTAATGATCATAGCACCTTGGATGGGTATTCCAGAAGAACCACCTTGTCTTCAAAAATGTATCACACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000373970.4 ENST00000467359.5 ENST00000476752.1 ENST00000494277.5 |
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| CDS CCA 72 bp | CATAGCATCTATTATATAAAAGGAGTTCACTGCATTTaGATAGCTGGTTTAGTGTCTCTGACAAGTGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: HSIYYIKGVHCI*IAGLVSLTSVK Trigger: CTTCACACTTGTCAGAGACACTAAACCAGCTATCCAAATGCAGTGAACTCCTTTTATATAATAGATGCTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373970.4 ENST00000476752.1 |
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| CDS CAA 72 bp | AGTGATGGTTTCCTCAATTTCTCCTCGGAAATGATTTaGATCAGAAGACACACATATTCCATTTTTGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: SDGFLNFSSEMI*IRRHTYSIFAV Trigger: TACTGCAAAAATGGAATATGTGTGTCTTCTGATCAAAATCATTTCCGAGGAGAAATTGAGGAAACCATCACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000373970.4 ENST00000467359.5 ENST00000494277.5 |
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