RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DIXDC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000150764

Ensembl transcript IDs: ENST00000440460.7, ENST00000526418.1, ENST00000526500.5, ENST00000528399.1, ENST00000529225.5, ENST00000530645.1, ENST00000614104.4, ENST00000615255.1, ENST00000618522.4

Found 539 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAAATGTCAGAACCACTGGACTGGGCCCTGACAGGTTCCAGCCATaGCCCCATGTGGTCACAGTTAAGCACTGGCACTGGGACTGCACA +
Preference number: 1 (lower is better)
Translates to: ANVRTTGLGPDRFQP*PHVVTVKHWHWDCT
Trigger: TGTGCAGTCCCAGTGCCAGTGCTTAACTGTGACCACATGGGGGCATGGCTGGAACCTGTCAGGGCCCAGTCCAGTGGTTCTGACATTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
3UTR CCA 90 bp GAACCACTGGACTGGGCCCTGACAGGTTCCAGCCATGCCCCCATGTaGTCACAGTTAAGCACTGGCACTGGGACTGCACAGATTCCATTT +
Preference number: 1 (lower is better)
Translates to: EPLDWALTGSSHAPM*SQLSTGTGTAQIPF
Trigger: AAATGGAATCTGTGCAGTCCCAGTGCCAGTGCTTAACTGTGACCACATGGGGGCATGGCTGGAACCTGTCAGGGCCCAGTCCAGTGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529225.5
3UTR TCA 90 bp TGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATaGGGATCACCAACAGGATCCTCATTTTACACAGGAGTTATGAGA +
Preference number: 1 (lower is better)
Translates to: CILLLRRLLSLWKLE*GSPTGSSFYTGVMR
Trigger: TCTCATAACTCCTGTGTAAAATGAGGATCCTGTTGGTGATCCTCATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR GCA 90 bp TCTTGGTTTGCAGTAGGTTCAAAGAAACAGAAAAGCTGGTACCTTTaGCTTGTCTGTGAGTACAAACGCTGGGACTCTGATTGCTGCAAC +
Preference number: 1 (lower is better)
Translates to: SWFAVGSKKQKSWYL*LVCEYKRWDSDCCN
Trigger: GTTGCAGCAATCAGAGTCCCAGCGTTTGTACTCACAGACAAGGCAAAGGTACCAGCTTTTCTGTTTCTTTGAACCTACTGCAAACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR CCA 90 bp GCAGCCCTTTTTCCATCCAAGCAACAATTCAGCACCATCCACGTCTaGTTCAAAAGATTACTGAAGTCTGGGCTTTCATCTTTGGTACCA +
Preference number: 1 (lower is better)
Translates to: AALFPSKQQFSTIHV*FKRLLKSGLSSLVP
Trigger: TGGTACCAAAGATGAAAGCCCAGACTTCAGTAATCTTTTGAACCAGACGTGGATGGTGCTGAATTGTTGCTTGGATGGAAAAAGGGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR CCA 90 bp AGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTaGAATGAGGATCACCAACAGGATCCTCATTTTACACAGGAGTTA +
Preference number: 1 (lower is better)
Translates to: SLAYFCSEGSSRFGN*NEDHQQDPHFTQEL
Trigger: TAACTCCTGTGTAAAATGAGGATCCTGTTGGTGATCCTCATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR TCA 90 bp TGGAATGAGGATCACCAACAGGATCCTCATTTTACACAGGAGTTATaGGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTGTGG +
Preference number: 1 (lower is better)
Translates to: WNEDHQQDPHFTQEL*ELHPLAEMLGHYLW
Trigger: CCACAGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTAAAATGAGGATCCTGTTGGTGATCCTCATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR GCA 90 bp CTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCTTaGATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAA +
Preference number: 1 (lower is better)
Translates to: LECSQIGNCSKQNQS*ILLLRRLLSLWKLE
Trigger: TTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR GCA 90 bp CCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCCTAGAATaGAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCTTGCATA +
Preference number: 1 (lower is better)
Translates to: PPGDNTMNKSGGLLE*SQIGNCSKQNQSCI
Trigger: TATGCAAGACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR TCA 90 bp CCAAGCAACAATTCAGCACCATCCACGTCTGGTTCAAAAGATTACTaGAGTCTGGGCTTTCATCTTTGGTACCACCTCATGAGTTATTCT +
Preference number: 1 (lower is better)
Translates to: PSNNSAPSTSGSKDY*SLGFHLWYHLMSYS
Trigger: AGAATAACTCATGAGGTGGTACCAAAGATGAAAGCCCAGACTTCAGTAATCTTTTGAACCAGACGTGGATGGTGCTGAATTGTTGCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR CCA 90 bp TTTTACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTaGTCATTACCTGTGGTACATGAGATTACCGAGCTAAAAGGGAAA +
Preference number: 1 (lower is better)
Translates to: FYTGVMRVTSSSRDA*SLPVVHEITELKGK
Trigger: TTTCCCTTTTAGCTCGGTAATCTCATGTACCACAGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGAGTTCCCTTTCCTGAGTaGAGCAGCCAGGGAGTGACC +
Preference number: 2 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRVPFPE*SSQGVT
Trigger: GGTCACTCCCTGGCTGCTTCACTCAGGAAAGGGAAC...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp ATAAACACTGGCACCTCATATGCAAATGTCAGAACCACTGGACTGGGCCCTGACAGCCATGCCCCCATGTaGTCACAGTTAAGCACTGGC +
Preference number: 2 (lower is better)
Translates to: INTGTSYANVRTTGLGPDSHAPM*SQLSTG
Trigger: GCCAGTGCTTAACTGTGACCACATGGGGGCATGGCT...GTCAGGGCCCAGTCCAGTGGTTCTGACATTTGCATATGAGGTGCCAGTGTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529225.5
3UTR-3UTR TCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTAGAAGCAGCCAGGGAGTaGCCAGGTTCCATAAGCCCT +
Preference number: 2 (lower is better)
Translates to: RGDELETDRSRTQNRCVLEAARE*PGSISP
Trigger: AGGGCTTATGGAACCTGGTCACTCCCTGGCTGCTTC...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCAGCACAGAAAGAGGACTaGCCTGTGGCCATCATGCTT +
Preference number: 2 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSAQKED*PVAIML
Trigger: AAGCATGATGGCCACAGGTCAGTCCTCTTTCTGTGC...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp ATAAACACTGGCACCTCATATGCAAATGTCAGAACCACTGGACTGGGCCCTGACGTCACAGTTAAGCACTaGCACTGGGACTGCACAGAT +
Preference number: 2 (lower is better)
Translates to: INTGTSYANVRTTGLGPDVTVKH*HWDCTD
Trigger: ATCTGTGCAGTCCCAGTGCCAGTGCTTAACTGTGAC...GTCAGGGCCCAGTCCAGTGGTTCTGACATTTGCATATGAGGTGCCAGTGTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529225.5
3UTR-3UTR TCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTGTTCCCTTTCCTGAGTaGAGCAGCCAGGGAGTGACC +
Preference number: 2 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPVPFPE*SSQGVT
Trigger: GGTCACTCCCTGGCTGCTTCACTCAGGAAAGGGAAC...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCATTTAGTTCCCTTTCCTaGGTGAAGCAGCCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSFSSLS*VKQPGS
Trigger: ACTCCCTGGCTGCTTCACTCAGGAAAGGGAACTAAA...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTAGCACAGAAAGAGGACTaGCCTGTGGCCATCATGCTT +
Preference number: 2 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVAQKED*PVAIML
Trigger: AAGCATGATGGCCACAGGTCAGTCCTCTTTCTGTGC...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACCTTTGCCTTGTCTGTaGGTACAAACGCTGGGACTC +
Preference number: 2 (lower is better)
Translates to: RGDELETDRSRTQNRCVLPLPCL*VQTLGL
Trigger: GAGTCCCAGCGTTTGTACTCACAGACAAGGCAAAGG...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTCCTTTGCCTTGTCTGTaGGTACAAACGCTGGGACTC +
Preference number: 2 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCPLPCL*VQTLGL
Trigger: GAGTCCCAGCGTTTGTACTCACAGACAAGGCAAAGG...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR CAA 90 bp TTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTaGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGC +
Preference number: 2 (lower is better)
Translates to: LETDRSRTQNRCVLL*CLAVYIGGHRQIDC
Trigger: GCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCAAAACTAACAGTACATaGAATAGGCCCTATGTGGGC +
Preference number: 2 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLKTNST*NRPYVG
Trigger: GCCCACATAGGGCCTATTTCATGTACTGTTAGTTTT...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTAACTCTGGCCTTGAAATaGGGGGCAGACAAGTACTTC +
Preference number: 2 (lower is better)
Translates to: RGDELETDRSRTQNRCVLTLALK*GADKYF
Trigger: GAAGTACTTGTCTGCCCCTCATTTCAAGGCCAGAGT...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACTCTGGCCTTGAAATaGGGGGCAGACAAGTACTTC +
Preference number: 2 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCTLALK*GADKYF
Trigger: GAAGTACTTGTCTGCCCCTCATTTCAAGGCCAGAGT...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR GCA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGAGACCTGTGGCCATCATaGTTGGAGAAGCTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRDLWPS*LEKLLF
Trigger: AAACAGAAGCTTCTCCAAGCATGATGGCCACAGGTC...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR GCA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCTTTAAGTACCAGATATaGCAGGCACAGAAAGAGGAC +
Preference number: 2 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLFKYQI*QAQKED
Trigger: GTCCTCTTTCTGTGCCTGGCATATCTGGTACTTAAA...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR GCA 90 bp TTTACACAGACTTTTCCGGCCTTAAGAGTTACACTTAGGCTCAAGGACAGCACACACTGGCACTGGGACTaGACAGATTCCATTTGTGGG +
Preference number: 2 (lower is better)
Translates to: FTQTFPALRVTLRLKDSTHWHWD*TDSICG
Trigger: CCCACAAATGGAATCTGTGCAGTCCCAGTGCCAGTG...TGTGCTGTCCTTGAGCCTAAGTGTAACTCTTAAGGCCGGAAAAGTCTGTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
3UTR-3UTR CCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTAAAGAGGACTGACCTGTaGCCATCATGCTTGGAGAAG +
Preference number: 2 (lower is better)
Translates to: RGDELETDRSRTQNRCVLKRTDL*PSCLEK
Trigger: CTTCTCCAAGCATGATGGCCACAGGTCAGTCCTCTT...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCCTCCAGATGAACCCATaGTCTACATTTGGACAGAAT +
Preference number: 2 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLLQMNP*STFGQN
Trigger: ATTCTGTCCAAATGTAGACCATGGGTTCATCTGGAG...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR CAA 90 bp ACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTaGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGG +
Preference number: 2 (lower is better)
Translates to: TDRSRTQNRCVLLLC*AVYIGGHRQIDCFW
Trigger: CCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp CTAATTTGCAACCATCCTGGTCAAAAAGAGCTGAAAAGTTGGTCAGTAAGTAGAGAAGCAGCCAGGGAGTaGCCAGGTTCCATAAGCCCT +
Preference number: 2 (lower is better)
Translates to: LICNHPGQKELKSWSVSREAARE*PGSISP
Trigger: AGGGCTTATGGAACCTGGTCACTCCCTGGCTGCTTC...TCTACTTACTGACCAACTTTTCAGCTCTTTTTGACCAGGATGGTTGCAAATTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440460.7
3UTR-3UTR TCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTCAAACGCTGGGACTCTaGTTGCTGCAACCATTGAGG +
Preference number: 2 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPQTLGL*LLQPLR
Trigger: CCTCAATGGTTGCAGCAATCAGAGTCCCAGCGTTTG...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGCTGGTTGATGGTGCTTaGTGGATGAATGAGAAAACC +
Preference number: 2 (lower is better)
Translates to: SVLHTSAQKAPLALETGMLVDGA*WMNEKT
Trigger: GGTTTTCTCATTCATCCATCAAGCACCATCAACCAG...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGACATCAAGTATCTTTTaGGCTCCTTCTCTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: SVLHTSAQKAPLALETGMTSSIF*APSLCQ
Trigger: CTGGCAGAGAGAAGGAGCTCAAAAGATACTTGATGT...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR GCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTGACCTGTGGCCATCATaGTTGGAGAAGCTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCDLWPS*LEKLLF
Trigger: AAACAGAAGCTTCTCCAAGCATGATGGCCACAGGTC...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR GCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACCCAGAATGATCCCTaGCATTCACAACTCATGCTC +
Preference number: 2 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCTQNDP*HSQLML
Trigger: GAGCATGAGTTGTGAATGGCAGGGATCATTCTGGGT...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR GCA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCAAACAGAATCAGTCTTaGATACTTCTGCTCAGAAGG +
Preference number: 2 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLKQNQS*ILLLRR
Trigger: CCTTCTGAGCAGAAGTATGCAAGACTGATTCTGTTT...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCGAAATAGGCCCTATGTaGGCAAAAGGACAAGCTGCA +
Preference number: 2 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVEIGPM*AKGQAA
Trigger: TGCAGCTTGTCCTTTTGCCCACATAGGGCCTATTTC...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTAATGCTCCACGCCCCATaGTTTCTATTGTGCCCTAAA +
Preference number: 2 (lower is better)
Translates to: RGDELETDRSRTQNRCVLMLHAP*FLLCPK
Trigger: TTTAGGGCACAATAGAAACCATGGGGCGTGGAGCAT...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCATGCTCCACGCCCCATaGTTTCTATTGTGCCCTAAA +
Preference number: 2 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVMLHAP*FLLCPK
Trigger: TTTAGGGCACAATAGAAACCATGGGGCGTGGAGCAT...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR CAA 90 bp ACAGAATCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTaGGAAACTGGAATGAGGATCACCAACAGGATCCTCATTTTACAC +
Preference number: 2 (lower is better)
Translates to: TESVLHTSAQKAPLA*ETGMRITNRILILH
Trigger: GTGTAAAATGAGGATCCTGTTGGTGATCCTCATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGATTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR CAA 90 bp CCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCTaGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGA +
Preference number: 2 (lower is better)
Translates to: PRMQPNRKLFQTESV*HTSAQKAPLALETG
Trigger: TCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGGAGAAATTGGTGACATaGGGACTTTTTCTCCAGACT +
Preference number: 2 (lower is better)
Translates to: SVLHTSAQKAPLALETGMEKLVT*GLFLQT
Trigger: AGTCTGGAGAAAAAGTCCTCATGTCACCAATTTCTC...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR GCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTGAGGCACTGAGGCCATaGAGCTCCTTTTCCAAAAGA +
Preference number: 2 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPEALRP*SSFSKR
Trigger: TCTTTTGGAAAAGGAGCTGCATGGCCTCAGTGCCTC...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCACTCCAGATGAACCCATaGTCTACATTTGGACAGAAT +
Preference number: 2 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSLQMNP*STFGQN
Trigger: ATTCTGTCCAAATGTAGACCATGGGTTCATCTGGAG...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGCATTCTTTCTTTTGCTaGCTTTCCCAAACTTTCCCA +
Preference number: 2 (lower is better)
Translates to: SVLHTSAQKAPLALETGMHSFFC*LSQTFP
Trigger: TGGGAAAGTTTGGGAAAGTCAGCAAAAGAAAGAATG...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTTTTTTATGGAGGCACTaGGGCCATGCAGCTCCTTTT +
Preference number: 2 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPFLWRH*GHAAPF
Trigger: AAAAGGAGCTGCATGGCCTCAGTGCCTCCATAAAAA...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR GCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGAAAAGCTGGTACCTTTaGCTTGTCTGTGAGTACAAA +
Preference number: 2 (lower is better)
Translates to: SVLHTSAQKAPLALETGMKSWYL*LVCEYK
Trigger: TTTGTACTCACAGACAAGGCAAAGGTACCAGCTTTT...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR GCA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCCAGACAAGTACTTCATaGTCAGTACTTATAAATCAC +
Preference number: 2 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLQTSTS*SVLINH
Trigger: GTGATTTATAAGTACTGAGCATGAAGTACTTGTCTG...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTTGTGAGTACAAACGCTaGGACTCTGATTGCTGCAAC +
Preference number: 2 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPCEYKR*DSDCCN
Trigger: GTTGCAGCAATCAGAGTCCCAGCGTTTGTACTCACA...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTCTGGGCTTTCATCTTTaGTACCACCTCATGAGTTAT +
Preference number: 2 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCLGFHL*YHLMSY
Trigger: ATAACTCATGAGGTGGTACCAAAGATGAAAGCCCAG...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTACTGGGCTTTCATCTTTaGTACCACCTCATGAGTTAT +
Preference number: 2 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVLGFHL*YHLMSY
Trigger: ATAACTCATGAGGTGGTACCAAAGATGAAAGCCCAG...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCAGCACCATCCACGTCTaGTTCAAAAGATTACTGAAG +
Preference number: 2 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVSTIHV*FKRLLK
Trigger: CTTCAGTAATCTTTTGAACCAGACGTGGATGGTGCT...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCATGTAACACACAGGAATaGTGCATCCAATTCCTAATT +
Preference number: 2 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSCNTQE*CIQFLI
Trigger: AATTAGGAATTGGATGCATCATTCCTGTGTGTTACA...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCGGTTCAAAAGATTACTaGAGTCTGGGCTTTCATCTT +
Preference number: 2 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVGSKDY*SLGFHL
Trigger: AAGATGAAAGCCCAGACTTCAGTAATCTTTTGAACC...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGAAAAACTAACAGTACATaGAATAGGCCCTATGTGGGC +
Preference number: 2 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGKTNST*NRPYVG
Trigger: GCCCACATAGGGCCTATTTCATGTACTGTTAGTTTT...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCTTTACACAGGAGTTATaGGAGTTACATCCTCTAGCA +
Preference number: 2 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVFTQEL*ELHPLA
Trigger: TGCTAGAGGATGTAACTCTCATAACTCCTGTGTAAA...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR GCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTGCCATTCACAACTCATaGTCCACGCCCCATGGTTTC +
Preference number: 2 (lower is better)
Translates to: ENPGYQIISVVELLASSLAIHNS*STPHGF
Trigger: GAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGC...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCAAGAAACAGAAAAGCTaGTACCTTTGCCTTGTCTGT +
Preference number: 2 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVKKQKS*YLCLVC
Trigger: ACAGACAAGGCAAAGGTACCAGCTTTTCTGTTTCTT...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGAAGCACCATCCACGTCTaGTTCAAAAGATTACTGAAG +
Preference number: 2 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGSTIHV*FKRLLK
Trigger: CTTCAGTAATCTTTTGAACCAGACGTGGATGGTGCT...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGAGGTTCAAAAGATTACTaGAGTCTGGGCTTTCATCTT +
Preference number: 2 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGGSKDY*SLGFHL
Trigger: AAGATGAAAGCCCAGACTTCAGTAATCTTTTGAACC...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTAAATAATCTCGGTAGTTaGACTGTTAGCTTCTTCACT +
Preference number: 2 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVNNLGS*TVSFFT
Trigger: AGTGAAGAAGCTAACAGTTCAACTACCGAGATTATT...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGATGCTTGATGGATGAATaGGAAAACCCAGGTTATCAA +
Preference number: 2 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGCLMDE*ENPGYQ
Trigger: TTGATAACCTGGGTTTTCTCATTCATCCATCAAGCA...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGATGTAACACACAGGAATaGTGCATCCAATTCCTAATT +
Preference number: 2 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGCNTQE*CIQFLI
Trigger: AATTAGGAATTGGATGCATCATTCCTGTGTGTTACA...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTCATTCTTTCTTTTGCTaGCTTTCCCAAACTTTCCCA +
Preference number: 2 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPHSFFC*LSQTFP
Trigger: TGGGAAAGTTTGGGAAAGTCAGCAAAAGAAAGAATG...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR GCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTAGCTTTTCACTCCTTATaGCTTTCAAACAAAAGTTCA +
Preference number: 2 (lower is better)
Translates to: RGDELETDRSRTQNRCVLAFHSL*LSNKSS
Trigger: TGAACTTTTGTTTGAAAGGCATAAGGAGTGAAAAGC...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACAAAGAGGACTGACCTGTaGCCATCATGCTTGGAGAAG +
Preference number: 2 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTKRTDL*PSCLEK
Trigger: CTTCTCCAAGCATGATGGCCACAGGTCAGTCCTCTT...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTACAAGGAACTCCAGATaGACCCATGGTCTACATTTG +
Preference number: 2 (lower is better)
Translates to: ENPGYQIISVVELLASSLTRNSR*THGLHL
Trigger: CAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGT...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTACAAAGGAGATGCCATaGGTTAAAGTCATGAAACAA +
Preference number: 2 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPTKEMP*VKVMKQ
Trigger: TTGTTTCATGACTTTAACTCATGGCATCTCCTTTGT...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR GCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACAACCCAGAATGATCCCTaGCATTCACAACTCATGCTC +
Preference number: 2 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTTQNDP*HSQLML
Trigger: GAGCATGAGTTGTGAATGGCAGGGATCATTCTGGGT...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTAAAGTCAAAAAGATATaGGTAGCAGCACCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPKVKKI*VAAPFH
Trigger: ATGGAAAGGTGCTGCTACCCATATCTTTTTGACTTT...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTAGTAGTTTGTTGAAATaGCTGAAAAGGGGAGATGAA +
Preference number: 2 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPSSLLK*LKRGDE
Trigger: TTCATCTCCCCTTTTCAGCCATTTCAACAAACTACT...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR CAA 90 bp AAAGGATACACACAACTTTTAGCTAGAGTCGCAAACATCATTAGTTaGCTCAAACACATACTAATCAGCCACAGTTCCTGTAGAGGAAAG +
Preference number: 2 (lower is better)
Translates to: KGYTQLLARVANIIS*LKHILISHSSCRGK
Trigger: CTTTCCTCTACAGGAACTGTGGCTGATTAGTATGTGTTTGAGCAAACTAATGATGTTTGCGACTCTAGCTAAAAGTTGTGTGTATCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
3UTR-3UTR TCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACACTGGTTGATGGTGCTTaGTGGATGAATGAGAAAACC +
Preference number: 2 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTLVDGA*WMNEKT
Trigger: GGTTTTCTCATTCATCCATCAAGCACCATCAACCAG...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR TCA 90 bp CTAATTTGCAACCATCCTGGTCAAAAAGAGCTGAAAAGTTGGTCAGTAAGTAGATTTACACAGGAGTTATaGGAGTTACATCCTCTAGCA +
Preference number: 2 (lower is better)
Translates to: LICNHPGQKELKSWSVSRFTQEL*ELHPLA
Trigger: TGCTAGAGGATGTAACTCTCATAACTCCTGTGTAAA...TCTACTTACTGACCAACTTTTCAGCTCTTTTTGACCAGGATGGTTGCAAATTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440460.7
3UTR-3UTR CCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACACTTTCCATACCCGCCTaGATTTTCAAGGAGCTTTTC +
Preference number: 2 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTLSIPA*IFKELF
Trigger: GAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAG...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR GCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACATTTAAGTACCAGATATaGCAGGCACAGAAAGAGGAC +
Preference number: 2 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTFKYQI*QAQKED
Trigger: GTCCTCTTTCTGTGCCTGGCATATCTGGTACTTAAA...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTAAGAAACAGAAAAGCTaGTACCTTTGCCTTGTCTGT +
Preference number: 2 (lower is better)
Translates to: ENPGYQIISVVELLASSLKKQKS*YLCLVC
Trigger: ACAGACAAGGCAAAGGTACCAGCTTTTCTGTTTCTT...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACAAAGATTACTGAAGTCTaGGCTTTCATCTTTGGTACC +
Preference number: 2 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTKITEV*AFIFGT
Trigger: GGTACCAAAGATGAAAGCCCAGACTTCAGTAATCTT...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACAATAATAATGGCTGACTaGTTGATGGTGCTTGATGGA +
Preference number: 2 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTIIMAD*LMVLDG
Trigger: TCCATCAAGCACCATCAACCAGTCAGCCATTATTAT...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR CCA 72 bp GACTGGGCCCTGACAGGTTCCAGCCATGCCCCCATGTaGTCACAGTTAAGCACTGGCACTGGGACTGCACAG +
Preference number: 3 (lower is better)
Translates to: DWALTGSSHAPM*SQLSTGTGTAQ
Trigger: CTGTGCAGTCCCAGTGCCAGTGCTTAACTGTGACCACATGGGGGCATGGCTGGAACCTGTCAGGGCCCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529225.5
3UTR GCA 72 bp AGAACCACTGGACTGGGCCCTGACAGGTTCCAGCCATaGCCCCATGTGGTCACAGTTAAGCACTGGCACTGG +
Preference number: 3 (lower is better)
Translates to: RTTGLGPDRFQP*PHVVTVKHWHW
Trigger: CCAGTGCCAGTGCTTAACTGTGACCACATGGGGGCATGGCTGGAACCTGTCAGGGCCCAGTCCAGTGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
3UTR CCA 72 bp CTGGCACCTCATATGCAAATGTCAGAACCACTGGACTaGGCCCTGACAGGTTCCAGCCATGCCCCCATGTGG +
Preference number: 3 (lower is better)
Translates to: LAPHMQMSEPLD*ALTGSSHAPMW
Trigger: CCACATGGGGGCATGGCTGGAACCTGTCAGGGCCCAGTCCAGTGGTTCTGACATTTGCATATGAGGTGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529225.5
3UTR TCA 72 bp CTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATaGGGATCACCAACAGGATCCTCATTTTACACAGGA +
Preference number: 3 (lower is better)
Translates to: LLRRLLSLWKLE*GSPTGSSFYTG
Trigger: TCCTGTGTAAAATGAGGATCCTGTTGGTGATCCTCATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CAA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTAGCTGGTACCTTTGCCTaGTCTGTGAGTACAAACGCT +
Preference number: 3 (lower is better)
Translates to: RGDELETDRSRTQNRCVLAGTFA*SVSTNA
Trigger: AGCGTTTGTACTCACAGACAAGGCAAAGGTACCAGC...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CAA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGAGCCCCATGGTTTCTATaGTGCCCTAAAAGATCAGCC +
Preference number: 3 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGAPWFL*CPKRSA
Trigger: GGCTGATCTTTTAGGGCACAATAGAAACCATGGGGC...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CAA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGGACATCAAGTATCTTTaGAGCTCCTTCTCTCTGCCA +
Preference number: 3 (lower is better)
Translates to: SVLHTSAQKAPLALETGMDIKYL*SSFSLP
Trigger: TGGCAGAGAGAAGGAGCTCAAAAGATACTTGATGTC...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CAA 90 bp ATAAACACTGGCACCTCATATGCAAATGTCAGAACCACTGGACTGGGCCCTGACTTGTTGTATTGTTACTaGAAGCCGAGAACTCCGAGA +
Preference number: 3 (lower is better)
Translates to: INTGTSYANVRTTGLGPDLLYCY*KPRTPR
Trigger: TCTCGGAGTTCTCGGCTTCAAGTAACAATACAACAA...GTCAGGGCCCAGTCCAGTGGTTCTGACATTTGCATATGAGGTGCCAGTGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529225.5
3UTR-3UTR CAA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGGGAGAAGCTTCTGTTTaGGCACACAAACTAGAAACT +
Preference number: 3 (lower is better)
Translates to: SVLHTSAQKAPLALETGMGEASV*AHKLET
Trigger: AGTTTCTAGTTTGTGTGCCAAAACAGAAGCTTCTCC...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CAA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGAGGAGAAGCTTCTGTTTaGGCACACAAACTAGAAACT +
Preference number: 3 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRGEASV*AHKLET
Trigger: AGTTTCTAGTTTGTGTGCCAAAACAGAAGCTTCTCC...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR GCA 72 bp GCAGTAGGTTCAAAGAAACAGAAAAGCTGGTACCTTTaGCTTGTCTGTGAGTACAAACGCTGGGACTCTGAT +
Preference number: 3 (lower is better)
Translates to: AVGSKKQKSWYL*LVCEYKRWDSD
Trigger: ATCAGAGTCCCAGCGTTTGTACTCACAGACAAGGCAAAGGTACCAGCTTTTCTGTTTCTTTGAACCTACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR GCA 72 bp AGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCTTaGATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGG +
Preference number: 3 (lower is better)
Translates to: SQIGNCSKQNQS*ILLLRRLLSLW
Trigger: CCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGATTCTGTTTGGAACAGTTTCCTATTTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR CCA 72 bp TACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTaGAATGAGGATCACCAACAGGATCCTCATTTTACA +
Preference number: 3 (lower is better)
Translates to: YFCSEGSSRFGN*NEDHQQDPHFT
Trigger: TGTAAAATGAGGATCCTGTTGGTGATCCTCATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR CCA 72 bp CAAGGACAGCACAATGGAACTGGCTATCATAAACACTaGCACCTCATATGCAAATGTCAGAACCACTGGACT +
Preference number: 3 (lower is better)
Translates to: QGQHNGTGYHKH*HLICKCQNHWT
Trigger: AGTCCAGTGGTTCTGACATTTGCATATGAGGTGCCAGTGTTTATGATAGCCAGTTCCATTGTGCTGTCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529225.5
3UTR-3UTR CAA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGCCTCATGAGTTATTCTaGGTTTGCAGTAGGTTCAAA +
Preference number: 3 (lower is better)
Translates to: SVLHTSAQKAPLALETGMPHELF*VCSRFK
Trigger: TTTGAACCTACTGCAAACCAAGAATAACTCATGAGG...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CAA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTGTCCTACTCTTGTGTTaGGCAGTGTACATTGGAGGT +
Preference number: 3 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPVLLLC*AVYIGG
Trigger: ACCTCCAATGTACACTGCCAAACACAAGAGTAGGAC...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR TCA 72 bp AATTCAGCACCATCCACGTCTGGTTCAAAAGATTACTaGAGTCTGGGCTTTCATCTTTGGTACCACCTCATG +
Preference number: 3 (lower is better)
Translates to: NSAPSTSGSKDY*SLGFHLWYHLM
Trigger: CATGAGGTGGTACCAAAGATGAAAGCCCAGACTTCAGTAATCTTTTGAACCAGACGTGGATGGTGCTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR CCA 72 bp CAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTaGAGGTCACAGGCAGATAGACTGCTTTTGGTAATA +
Preference number: 3 (lower is better)
Translates to: QMCPTLVFGSVH*RSQADRLLLVI
Trigger: TATTACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CAA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACCCATGGTCTACATTaGGACAGAATTTTAAGTACC +
Preference number: 3 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCTHGLH*DRILST
Trigger: GGTACTTAAAATTCTGTCCAAATGTAGACCATGGGT...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CAA 90 bp CTAATTTGCAACCATCCTGGTCAAAAAGAGCTGAAAAGTTGGTCAGTAAGTAGAAAGGCTCCTCTCGCTTaGGAAACTGGAATGAGGATC +
Preference number: 3 (lower is better)
Translates to: LICNHPGQKELKSWSVSRKAPLA*ETGMRI
Trigger: GATCCTCATTCCAGTTTCCAAAGCGAGAGGAGCCTT...TCTACTTACTGACCAACTTTTCAGCTCTTTTTGACCAGGATGGTTGCAAATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440460.7
3UTR TCA 72 bp GATCACCAACAGGATCCTCATTTTACACAGGAGTTATaGGAGTTACATCCTCTAGCAGAGATGCTTGGTCAT +
Preference number: 3 (lower is better)
Translates to: DHQQDPHFTQEL*ELHPLAEMLGH
Trigger: ATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTAAAATGAGGATCCTGTTGGTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR CCA 72 bp TTTCCATCCAAGCAACAATTCAGCACCATCCACGTCTaGTTCAAAAGATTACTGAAGTCTGGGCTTTCATCT +
Preference number: 3 (lower is better)
Translates to: FPSKQQFSTIHV*FKRLLKSGLSS
Trigger: AGATGAAAGCCCAGACTTCAGTAATCTTTTGAACCAGACGTGGATGGTGCTGAATTGTTGCTTGGATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CAA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGAACCCATGGTCTACATTaGGACAGAATTTTAAGTACC +
Preference number: 3 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGTHGLH*DRILST
Trigger: GGTACTTAAAATTCTGTCCAAATGTAGACCATGGGT...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CAA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGACCTCATGAGTTATTCTaGGTTTGCAGTAGGTTCAAA +
Preference number: 3 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGPHELF*VCSRFK
Trigger: TTTGAACCTACTGCAAACCAAGAATAACTCATGAGG...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CAA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTCCAAAGAGTAGTTTGTaGAAATGGCTGAAAAGGGGA +
Preference number: 3 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPPKSSL*KWLKRG
Trigger: TCCCCTTTTCAGCCATTTCAACAAACTACTCTTTGG...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR GCA 72 bp GACAATACTATGAATAAGTCAGGAGGCCTCCTAGAATaGAGCCAAATAGGAAACTGTTCCAAACAGAATCAG +
Preference number: 3 (lower is better)
Translates to: DNTMNKSGGLLE*SQIGNCSKQNQ
Trigger: CTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCTGACTTATTCATAGTATTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR-3UTR CAA 90 bp ACTAGCACAAACCCACAAAGCACTGCTAAGGGGTATCCCTTTAAAGCCAAACATTTTTTGCTTGTTGTATaGTTACTTGAAGCCGAGAAC +
Preference number: 3 (lower is better)
Translates to: TSTNPQSTAKGYPFKAKHFLLVV*LLEAEN
Trigger: GTTCTCGGCTTCAAGTAACAATACAACAAGCAAAAA...ATGTTTGGCTTTAAAGGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGCTAGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529225.5
3UTR CCA 72 bp CTGATAAGGTTTTTATTAGGGCACTGTATCCTGTTTTaGTCTCTGTACTTGGCTCTAAAGGATACACACAAC +
Preference number: 3 (lower is better)
Translates to: LIRFLLGHCILF*SLYLALKDTHN
Trigger: GTTGTGTGTATCCTTTAGAGCCAAGTACAGAGACCAAAACAGGATACAGTGCCCTAATAAAAACCTTATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR TCA 90 bp TATGCAAATGTCAGAACCACTGGACTGGGCCCTGACAGGTTCCAGCCATGCCCCTTCCCGCTGCCATGGTaGTGCGGGGGCCGGCCACAA +
Preference number: 4 (lower is better)
Translates to: YANVRTTGLGPDRFQPCPFPLPW*CGGRPQ
Trigger: TTGTGGCCGGCCCCCGCATCACCATGGCAGCGGGAA...GGGGCATGGCTGGAACCTGTCAGGGCCCAGTCCAGTGGTTCTGACATTTGCATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR GCA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCCCGGCCCCTGGCCGCTaGATCTTGGCCTCCGCGGAC +
Preference number: 4 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLPAPGR*ILASAD
Trigger: GTCCGCGGAGGCCAAGATGCAGCGGCCAGGGGCCGG...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS-3UTR TCA 90 bp CCTTCCTACCCTCCTACTAGCACAAACCCACAAAGCACTGCTAAGGGGTATCCCTGTCCCCAGCCCTCCTaGGCTCGGCCTGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PSYPPTSTNPQSTAKGYPCPQPS*ARPASA
Trigger: AGCACTGGCAGGCCGAGCTCAGGAGGGCTGGGGACA...GGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGCTAGTAGGAGGGTAGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp GTCAGAACCACTGGACTGGGCCCTGACAGGTTCCAGCCATGCCCCCATGTGGTCTTTGCAGAGGGGCTCTaGAGTCCCGTCCTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: VRTTGLGPDRFQPCPHVVFAEGL*SPVLGS
Trigger: TGAACCAAGGACGGGACTCCAGAGCCCCTCTGCAAA...GACCACATGGGGGCATGGCTGGAACCTGTCAGGGCCCAGTCCAGTGGTTCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR TCA 90 bp AGTAGAATAGAACACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGGGATGCTCCAGGCTCTaGAGCGCGCAGTCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: SRIEHCVPTDKELQMNPWGCSRL*SAQSRP
Trigger: CGGCCGGGACTGCGCGCTTCAGAGCCTGGAGCATCC...CCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTGTTCTATTCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS-3UTR CCA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGACAGGCTGCCGGCCCCTaGCCGCTGCATCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRQAAGP*PLHLGL
Trigger: GAGGCCAAGATGCAGCGGCCAGGGGCCGGCAGCCTG...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS-3UTR CCA 90 bp CAAAGCACTGCTAAGGGGTATCCCTTTAAAGCCAAACATAAACTGAGGGGAGAACCTTGGTCCCGCCTCTaGCCCGCCGGATCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: QSTAKGYPFKAKHKLRGEPWSRL*PAGSRL
Trigger: GAGGCGGGATCCGGCGGGCCAGAGGCGGGACCAAGG...TTCTCCCCTCAGTTTATGTTTGGCTTTAAAGGGATACCCCTTAGCAGTGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp AGTAGAATAGAACACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGCTGGCCGCTGCATCTTaGCCTCCGCGGACGCACGGT +
Preference number: 4 (lower is better)
Translates to: SRIEHCVPTDKELQMNPWLAAAS*PPRTHG
Trigger: ACCGTGCGTCCGCGGAGGCCAAGATGCAGCGGCCAG...CCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTGTTCTATTCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS-3UTR CCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGACTCGGCTCAGCTCATTaGGATCCCTCCGGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGLGSAH*DPSGVP
Trigger: CGGGACTCCGGAGGGATCCCAATGAGCTGAGCCGAG...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR TCA 90 bp CCTTCCTACCCTCCTACTAGCACAAACCCACAAAGCACTGCTAAGGGGTATCCCGATCGGGACATGTCATaGCACACATCGGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PSYPPTSTNPQSTAKGYPDRDMS*HTSARA
Trigger: TGCTCTGGCCGATGTGTGTCATGACATGTCCCGATC...GGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGCTAGTAGGAGGGTAGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR TCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGGAGGATCGTGGCCACTaGAGCTGTTGCGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SVLHTSAQKAPLALETGMEDRGH*SCCAGC
Trigger: GCAGCCTGCGCAACAGCTTCAGTGGCCACGATCCTC...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGAGCCTGCGTCCCCGGGTaGAGTGGGAGGCTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGACVPG*SGRLRV
Trigger: GACTCTCAGCCTCCCACTTCACCCGGGGACGCAGGC...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS-3UTR GCA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCTCTTGTCGCAGGTCCTaGACAGGCTTCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLSCRRS*TGFTAG
Trigger: GCCAGCAGTGAAGCCTGTGCAGGACCTGCGACAAGA...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR GCA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCGCATCTCGAACAAGCTaGAGGTCGCTGGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLASRTS*RSLVPL
Trigger: CAGAGGGACCAGCGACCTGCAGCTTGTTCGAGATGC...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCCTCGGGATTGACACCTaGTTCACAGAGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLLGIDT*FTEGQG
Trigger: CCCTTGGCCCTCTGTGAACCAGGTGTCAATCCCGAG...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp GTCAGAACCACTGGACTGGGCCCTGACAGGTTCCAGCCATGCCCCCATGTGGTCCAGATTACACAGGGTTaGGATAGGAAAGAAAAGGTC +
Preference number: 4 (lower is better)
Translates to: VRTTGLGPDRFQPCPHVVQITQG*DRKEKV
Trigger: GACCTTTTCTTTCCTATCCCAACCCTGTGTAATCTG...GACCACATGGGGGCATGGCTGGAACCTGTCAGGGCCCAGTCCAGTGGTTCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGACAACCCATCTCCCACTaGGAGGGAGGCTCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGQPISH*EGGSRR
Trigger: CCGCCGGGAGCCTCCCTCCCAGTGGGAGATGGGTTG...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS-3UTR CCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGCTCGGCCCCAGCGACTaGGATGCTCCAGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SVLHTSAQKAPLALETGMLGPSD*DAPGSE
Trigger: TTCAGAGCCTGGAGCATCCCAGTCGCTGGGGCCGAG...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS-3UTR TCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGGCACAGTGTGGTCGGTaGCTTTGCAGAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SVLHTSAQKAPLALETGMAQCGR*LCRGAL
Trigger: CAGAGCCCCTCTGCAAAGTCACCGACCACACTGTGC...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR TCA 90 bp CCTTCCTACCCTCCTACTAGCACAAACCCACAAAGCACTGCTAAGGGGTATCCCGGGCCATCTCTTAAATaGTGGGTCCGTCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: PSYPPTSTNPQSTAKGYPGPSLK*WVRLVQ
Trigger: CTGAACCAGACGGACCCATCATTTAAGAGATGGCCC...GGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGCTAGTAGGAGGGTAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR GCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCATGCCCTTCGTACTGCTaGACTAGGGCCCGCACACTC +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSCPSYC*TRARTL
Trigger: GAGTGTGCGGGCCCTAGTGCAGCAGTACGAAGGGCA...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCACCTGGGCAACAGCAGTaGCACAGTGTGGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSPGQQQ*HSVVGD
Trigger: GTCACCGACCACACTGTGCCACTGCTGTTGCCCAGG...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CCA 90 bp ATCATAAACACTGGCACCTCATATGCAAATGTCAGAACCACTGGACTGGGCCCTCCTGGGCAACAGCAGTaGCACAGTGTGGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: IINTGTSYANVRTTGLGPPGQQQ*HSVVGD
Trigger: GTCACCGACCACACTGTGCCACTGCTGTTGCCCAGG...AGGGCCCAGTCCAGTGGTTCTGACATTTGCATATGAGGTGCCAGTGTTTATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp TTTACACAGACTTTTCCGGCCTTAAGAGTTACACTTAGGCTCAAGGACAGCACAGGCCTGCCAGTGCTCTaGCTTTGCCGCGGTTTCCCG +
Preference number: 4 (lower is better)
Translates to: FTQTFPALRVTLRLKDSTGLPVL*LCRGFP
Trigger: CGGGAAACCGCGGCAAAGCCAGAGCACTGGCAGGCC...TGTGCTGTCCTTGAGCCTAAGTGTAACTCTTAAGGCCGGAAAAGTCTGTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGCGTCCCCGGGTGAAGTaGGAGGCTGAGAGTCACATC +
Preference number: 4 (lower is better)
Translates to: SVLHTSAQKAPLALETGMRPRVK*EAESHI
Trigger: GATGTGACTCTCAGCCTCCCACTTCACCCGGGGACG...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS-3UTR TCA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCCAAACGCTGGGACTCTaGTTGCTGCAACCATTGAGG +
Preference number: 4 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLQTLGL*LLQPLR
Trigger: CCTCAATGGTTGCAGCAATCAGAGTCCCAGCGTTTG...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGACTGCACAGGCTTCACTaGTGGCCTCTTCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGLHRLH*WPLLQL
Trigger: CAGCTGAAGAAGAGGCCAGCAGTGAAGCCTGTGCAG...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR GCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGAAGCTGTTGCGCAGGCTaGGGAGAGCATCTCGAACAA +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGSCCAG*GEHLEQ
Trigger: TTGTTCGAGATGCTCTCCGCAGCCTGCGCAACAGCT...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp TTTACACAGACTTTTCCGGCCTTAAGAGTTACACTTAGGCTCAAGGACAGCACACCAGTGCTCTGGCTTTaGCGCGGTTTCCCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: FTQTFPALRVTLRLKDSTPVLWL*RGFPLP
Trigger: TGGCAGCGGGAAACCGCGGCAAAGCCAGAGCACTGG...TGTGCTGTCCTTGAGCCTAAGTGTAACTCTTAAGGCCGGAAAAGTCTGTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR GCA 90 bp TTTACACAGACTTTTCCGGCCTTAAGAGTTACACTTAGGCTCAAGGACAGCACAAGCTCGGCCTGCCAGTaGTCTGGCTTTGCCGCGGTT +
Preference number: 4 (lower is better)
Translates to: FTQTFPALRVTLRLKDSTSSACQ*SGFAAV
Trigger: AACCGCGGCAAAGCCAGAGCACTGGCAGGCCGAGCT...TGTGCTGTCCTTGAGCCTAAGTGTAACTCTTAAGGCCGGAAAAGTCTGTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR GCA 90 bp CTAGCACAAACCCACAAAGCACTGCTAAGGGGTATCCCTTTAAAGCCAAACATACTCCTGAGCTCGGCCTaGCAGTGCTCTGGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: LAQTHKALLRGIPLKPNILLSSA*QCSGFA
Trigger: GGCAAAGCCAGAGCACTGGCAGGCCGAGCTCAGGAG...TATGTTTGGCTTTAAAGGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGACACAGGCTTCACTGCTaGCCTCTTCTTCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGHRLHC*PLLQLC
Trigger: GCACAGCTGAAGAAGAGGCCAGCAGTGAAGCCTGTG...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTGGAGTCCCGTCCTTaGTTCACCGTCCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RGDELETDRSRTQNRCVLLESRP*FTVLLE
Trigger: CTCCAGCAGGACGGTGAACCAAGGACGGGACTCCAG...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CCA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGACATGTCTCCCCGCGCTaGGGCTGGAAAACGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGHVSPR*GWKTPP
Trigger: TGGAGGCGTTTTCCAGCCCCAGCGCGGGGAGACATG...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS-3UTR TCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCAGAGCCAGGTTTGAAATaGGCTGCCAAGGCAAGGACC +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSEPGLK*AAKART
Trigger: GGTCCTTGCCTTGGCAGCTCATTTCAAACCTGGCTC...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR TCA 90 bp CTAGCACAAACCCACAAAGCACTGCTAAGGGGTATCCCTTTAAAGCCAAACATAGCACAGTGTGGTCGGTaGCTTTGCAGAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LAQTHKALLRGIPLKPNIAQCGR*LCRGAL
Trigger: CAGAGCCCCTCTGCAAAGTCACCGACCACACTGTGC...TATGTTTGGCTTTAAAGGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR TCA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGAGATCGGGACATGTCATaGCACACATCGGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRDRDMS*HTSARA
Trigger: TGCTCTGGCCGATGTGTGTCATGACATGTCCCGATC...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR TCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTTTGGCCTGGTGCTGCTaGAGAAGGCGATCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCLAWCC*RRRSFC
Trigger: GCAGAAGGATCGCCTTCTTCAGCAGCACCAGGCCAA...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTATTGGCCTGGTGCTGCTaGAGAAGGCGATCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVLAWCC*RRRSFC
Trigger: GCAGAAGGATCGCCTTCTTCAGCAGCACCAGGCCAA...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGACCCTCTGTTGCTGACTaGAGTAGCTCCTTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGPSVAD*SSSFSC
Trigger: GCAGGAAAAGGAGCTACTTCAGTCAGCAACAGAGGG...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTAGAAGCAGCCAGGGAGTaGCCAGGTTCCATAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVEAARE*PGSISP
Trigger: AGGGCTTATGGAACCTGGTCACTCCCTGGCTGCTTC...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTGTTCCCTTTCCTGAGTaGAGCAGCCAGGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCVPFPE*SSQGVT
Trigger: GGTCACTCCCTGGCTGCTTCACTCAGGAAAGGGAAC...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCTTTAGTTCCCTTTCCTaGGTGAAGCAGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLFSSLS*VKQPGS
Trigger: ACTCCCTGGCTGCTTCACTCAGGAAAGGGAACTAAA...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTAGGTGAAGTGGGAGGCTaGGAGTCACATCGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVGEVGG*ESHRSQ
Trigger: TTGGGAGCGATGTGACTCTCAGCCTCCCACTTCACC...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS-3UTR GCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGGACGGGGACCTTTGTTaGCCTTCGTACTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: SVLHTSAQKAPLALETGMDGDLC*PSYCCT
Trigger: AGTGCAGCAGTACGAAGGGCAACAAAGGTCCCCGTC...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR GCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTGCATCTCGAACAAGCTaGAGGTCGCTGGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCASRTS*RSLVPL
Trigger: CAGAGGGACCAGCGACCTGCAGCTTGTTCGAGATGC...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp CCTTCCTACCCTCCTACTAGCACAAACCCACAAAGCACTGCTAAGGGGTATCCCCACTGGCACCTCATATaGAAATGTCAGAACCACTGG +
Preference number: 4 (lower is better)
Translates to: PSYPPTSTNPQSTAKGYPHWHLI*KCQNHW
Trigger: CCAGTGGTTCTGACATTTGCATATGAGGTGCCAGTG...GGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGCTAGTAGGAGGGTAGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGCACTGTGGATTGGACTaGGTGAAGTCAGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SVLHTSAQKAPLALETGMHCGLD*VKSGWS
Trigger: GCTCCAGCCTGACTTCACCCAGTCCAATCCACAGTG...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CCA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCTCGCTCTTTGCACTGTaGATTGGACTGGGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLSLFAL*IGLGEV
Trigger: GACTTCACCCAGTCCAATCCACAGTGCAAAGAGCGA...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp ATCATAAACACTGGCACCTCATATGCAAATGTCAGAACCACTGGACTGGGCCCTGAGGCCACAGTTACCTaGAGCAGCTGGATTCAGACG +
Preference number: 4 (lower is better)
Translates to: IINTGTSYANVRTTGLGPEATVT*SSWIQT
Trigger: CGTCTGAATCCAGCTGCTCCAGGTAACTGTGGCCTC...AGGGCCCAGTCCAGTGGTTCTGACATTTGCATATGAGGTGCCAGTGTTTATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp GTCAGAACCACTGGACTGGGCCCTGACAGGTTCCAGCCATGCCCCCATGTGGTCAGTAAAAACATGATCTaGGGAGTGTTTATAGAAGCA +
Preference number: 4 (lower is better)
Translates to: VRTTGLGPDRFQPCPHVVSKNMI*GVFIEA
Trigger: TGCTTCTATAAACACTCCCCAGATCATGTTTTTACT...GACCACATGGGGGCATGGCTGGAACCTGTCAGGGCCCAGTCCAGTGGTTCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR TCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCGTTGTTCCTCGGGATTaGCACCTGGTTCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVVVPRD*HLVHRG
Trigger: CCCTCTGTGAACCAGGTGTCAATCCCGAGGAACAAC...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCATCAATAGTGTGGTGCTaGGGATCGTGGCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSSIVWC*GSWPLK
Trigger: CTTCAGTGGCCACGATCCTCAGCACCACACTATTGA...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCTACTTGAGTTCTGGGTaGCTTGACCCGAACCTTTCT +
Preference number: 4 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLYLSSG*LDPNLS
Trigger: AGAAAGGTTCGGGTCAAGTCACCCAGAACTCAAGTA...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCAGGAGAGCTCTGTGAGTaGGGCAACTTTGAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSGELCE*GNFELG
Trigger: CCCTAACTCAAAGTTGCCTCACTCACAGAGCTCTCC...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGATTTAGTTCCCTTTCCTaGGTGAAGCAGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGFSSLS*VKQPGS
Trigger: ACTCCCTGGCTGCTTCACTCAGGAAAGGGAACTAAA...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCACAAACGCTGGGACTCTaGTTGCTGCAACCATTGAGG +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSQTLGL*LLQPLR
Trigger: CCTCAATGGTTGCAGCAATCAGAGTCCCAGCGTTTG...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGACCTTTGCCTTGTCTGTaGGTACAAACGCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRPLPCL*VQTLGL
Trigger: GAGTCCCAGCGTTTGTACTCACAGACAAGGCAAAGG...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTAGTGAAGTCAGGCATTTaGCTTGCGTCCCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: RGDELETDRSRTQNRCVLVKSGI*LASLPW
Trigger: CCATGGGAGGGACGCAAGTCAAATGCCTGACTTCAC...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS-3UTR GCA 90 bp CAAAGCACTGCTAAGGGGTATCCCTTTAAAGCCAAACATAAACTGAGGGGAGAATCTTGTCGCAGGTCCTaGACAGGCTTCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QSTAKGYPFKAKHKLRGESCRRS*TGFTAG
Trigger: GCCAGCAGTGAAGCCTGTGCAGGACCTGCGACAAGA...TTCTCCCCTCAGTTTATGTTTGGCTTTAAAGGGATACCCCTTAGCAGTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR GCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGAAATGGACTCGCTCTTTaGACTGTGGATTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGNGLAL*TVDWTG
Trigger: CCCAGTCCAATCCACAGTGCAAAGAGCGAGTCCATT...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGGCCATTCACAACTCATaGTCCACGCCCCATGGTTTC +
Preference number: 4 (lower is better)
Translates to: SVLHTSAQKAPLALETGMAIHNS*STPHGF
Trigger: GAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGC...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGAGCCATTCACAACTCATaGTCCACGCCCCATGGTTTC +
Preference number: 4 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRAIHNS*STPHGF
Trigger: GAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGC...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGAGCTACCCCACACCAATaGCACCAGGCGACAATACTA +
Preference number: 4 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRATPHQ*HQATIL
Trigger: TAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTAGC...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp GAAAGTTGGAAACATTCTAATGCTCTAAGACAACTCTGCTCAATTTCTTCTCTTGCCGCGGTTTCCCGCTaGCATGGTGATGCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: ESWKHSNALRQLCSISSLAAVSR*HGDAGA
Trigger: GGCCCCCGCATCACCATGGCAGCGGGAAACCGCGGC...AAGAGAAGAAATTGAGCAGAGTTGTCTTAGAGCATTAGAATGTTTCCAACTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR GCA 90 bp ATCATAAACACTGGCACCTCATATGCAAATGTCAGAACCACTGGACTGGGCCCTCACTGGCACTGGGACTaGACAGATTCCATTTGTGGG +
Preference number: 4 (lower is better)
Translates to: IINTGTSYANVRTTGLGPHWHWD*TDSICG
Trigger: CCCACAAATGGAATCTGTGCAGTCCCAGTGCCAGTG...AGGGCCCAGTCCAGTGGTTCTGACATTTGCATATGAGGTGCCAGTGTTTATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTATCAGGCTGGAGCAGCTaGATTCAGACGGGGACCTTT +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVSGWSS*IQTGTF
Trigger: AAAGGTCCCCGTCTGAATCCAGCTGCTCCAGCCTGA...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGATGTGACTGTTGTAGTTaGTCGCCTCATCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGCDCCS*SPHLPL
Trigger: GAGAGGCAGATGAGGCGACCAACTACAACAGTCACA...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCATGCTCCACGCCCCATaGTTTCTATTGTGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLMLHAP*FLLCPK
Trigger: TTTAGGGCACAATAGAAACCATGGGGCGTGGAGCAT...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGCTGGTCTTGAACTCCTaGGCTCAAGCAGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SVLHTSAQKAPLALETGMLVLNS*AQAVFL
Trigger: CAGGAAGACTGCTTGAGCCCAGGAGTTCAAGACCAG...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp CAAAGCACTGCTAAGGGGTATCCCTTTAAAGCCAAACATAAACTGAGGGGAGAATCAGAACCACTGGACTaGGCCCTGACAGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QSTAKGYPFKAKHKLRGESEPLD*ALTGSS
Trigger: GCTGGAACCTGTCAGGGCCCAGTCCAGTGGTTCTGA...TTCTCCCCTCAGTTTATGTTTGGCTTTAAAGGGATACCCCTTAGCAGTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529225.5
3UTR CAA 72 bp GTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTaGGAAACTGGAATGAGGATCACCAACAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: VLHTSAQKAPLA*ETGMRITNRIL
Trigger: GAGGATCCTGTTGGTGATCCTCATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp ACTAGCACAAACCCACAAAGCACTGCTAAGGGGTATCCCTTTAAAGCCAAACATGAGCCAGGTTTGAAATaGGCTGCCAAGGCAAGGACC +
Preference number: 4 (lower is better)
Translates to: TSTNPQSTAKGYPFKAKHEPGLK*AAKART
Trigger: GGTCCTTGCCTTGGCAGCTCATTTCAAACCTGGCTC...ATGTTTGGCTTTAAAGGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR TCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTCAGCTGTTCTTCCCATaGGGTCTCCAGATAGGTTCC +
Preference number: 4 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCQLFFP*GLQIGS
Trigger: GGAACCTATCTGGAGACCTCATGGGAAGAACAGCTG...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCAACAGATGTGTCCTGCTaGGTCAATCTCTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSTDVSC*VNLCCK
Trigger: CTTGCAGCAGAGATTGACTCAGCAGGACACATCTGT...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGTAGAATAGAACACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGACAGATGTGTCCTGCTaGGTCAATCTCTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SRIEHCVPTDKELQMNPWTDVSC*VNLCCK
Trigger: CTTGCAGCAGAGATTGACTCAGCAGGACACATCTGT...CCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTGTTCTATTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCCCACCTGGTGGTAACTaGCATCAGAGAGTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVPPGGN*HQRVSG
Trigger: TCCGGAAACTCTCTGATGTCAGTTACCACCAGGTGG...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTACCCTCTGTTGCTGACTaGAGTAGCTCCTTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVPSVAD*SSSFSC
Trigger: GCAGGAAAAGGAGCTACTTCAGTCAGCAACAGAGGG...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTAGGAGAGCTCTGTGAGTaGGGCAACTTTGAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: RGDELETDRSRTQNRCVLGELCE*GNFELG
Trigger: CCCTAACTCAAAGTTGCCTCACTCACAGAGCTCTCC...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGACATGAAGGGCGTAAGTaGCCGGTCAGTGAAATAGAG +
Preference number: 4 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRHEGRK*PVSEIE
Trigger: CTCTATTTCACTGACCGGTCACTTACGCCCTTCATG...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCGCACAGAAAGAGGACTaGCCTGTGGCCATCATGCTT +
Preference number: 4 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVAQKED*PVAIML
Trigger: AAGCATGATGGCCACAGGTCAGTCCTCTTTCTGTGC...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCACAAGGAACTCCAGATaGACCCATGGTCTACATTTG +
Preference number: 4 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLTRNSR*THGLHL
Trigger: CAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGT...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCATCATTGAAGCCCTCCTaGAGGACGTCCAGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSSLKPS*RTSSKF
Trigger: GAACTTACTGGACGTCCTGCAGGAGGGCTTCAATGA...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR GCA 90 bp CAAAGCACTGCTAAGGGGTATCCCTTTAAAGCCAAACATAAACTGAGGGGAGAACTGCACAGGCTTCACTaGTGGCCTCTTCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QSTAKGYPFKAKHKLRGELHRLH*WPLLQL
Trigger: CAGCTGAAGAAGAGGCCAGCAGTGAAGCCTGTGCAG...TTCTCCCCTCAGTTTATGTTTGGCTTTAAAGGGATACCCCTTAGCAGTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR GCA 90 bp CAAAGCACTGCTAAGGGGTATCCCTTTAAAGCCAAACATAAACTGAGGGGAGAAGACGGGGACCTTTGTTaGCCTTCGTACTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: QSTAKGYPFKAKHKLRGEDGDLC*PSYCCT
Trigger: AGTGCAGCAGTACGAAGGGCAACAAAGGTCCCCGTC...TTCTCCCCTCAGTTTATGTTTGGCTTTAAAGGGATACCCCTTAGCAGTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR GCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTTGCGTCTCCATAACATaGAGGCGCTCCATGAGGCTA +
Preference number: 4 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCCVSIT*RRSMRL
Trigger: TAGCCTCATGGAGCGCCTGCATGTTATGGAGACGCA...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCAGAGGCACTGAGGCCATaGAGCTCCTTTTCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSEALRP*SSFSKR
Trigger: TCTTTTGGAAAAGGAGCTGCATGGCCTCAGTGCCTC...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCAAGTCTTGCATACTTCTaGTCAGAAGGCTCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSSLAYF*SEGSSR
Trigger: GCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACT...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp ATGAGCTTTACACAGACTTTTCCGGCCTTAAGAGTTACACTTAGGCTCAAGGACCACAGGCTTCACTGCTaGCCTCTTCTTCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: MSFTQTFPALRVTLRLKDHRLHC*PLLQLC
Trigger: GCACAGCTGAAGAAGAGGCCAGCAGTGAAGCCTGTG...GTCCTTGAGCCTAAGTGTAACTCTTAAGGCCGGAAAAGTCTGTGTAAAGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGATTCTTCATCTCCTGTTaGTTACCGGGACTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGFFISC*LPGLSC
Trigger: ACAGCTGAGTCCCGGTAACCAACAGGAGATGAAGAA...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CCA 90 bp TTTTGCTTGTTGTATTGTTACTTGAAGCCGAGAACTCCGAGAATCCTCCAGAATCTGGAGTCCCGTCCTTaGTTCACCGTCCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FCLLYCYLKPRTPRILQNLESRP*FTVLLE
Trigger: CTCCAGCAGGACGGTGAACCAAGGACGGGACTCCAG...ATTCTGGAGGATTCTCGGAGTTCTCGGCTTCAAGTAACAATACAACAAGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCTCCTTTTCCTGCCGTTaGAAGGAGAAAACCATTGCT +
Preference number: 4 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLSFSCR*KEKTIA
Trigger: AGCAATGGTTTTCTCCTTCCAACGGCAGGAAAAGGA...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTGGTCTTGAACTCCTaGGCTCAAGCAGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RGDELETDRSRTQNRCVLLVLNS*AQAVFL
Trigger: CAGGAAGACTGCTTGAGCCCAGGAGTTCAAGACCAG...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCCTGCAACAATCTCGATaGGATATGCCAGGATCACCC +
Preference number: 4 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVLQQSR*DMPGSP
Trigger: GGGTGATCCTGGCATATCTCATCGAGATTGTTGCAG...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR TCA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGACAGCTGTTCTTCCCATaGGGTCTCCAGATAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGQLFFP*GLQIGS
Trigger: GGAACCTATCTGGAGACCTCATGGGAAGAACAGCTG...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCCAGGTAAGGATCCATTaGGCAGTAAGGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVQVRIH*AVRPVV
Trigger: GACTACAGGCCTTACTGCTCAATGGATCCTTACCTG...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGTAGAATAGAACACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGAGCTCTTGTTTGAGCTaGAGAACAGATGTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SRIEHCVPTDKELQMNPWSSCLS*RTDVSC
Trigger: GCAGGACACATCTGTTCTTCAGCTCAAACAAGAGCT...CCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTGTTCTATTCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGAAGCTCTTGTTTGAGCTaGAGAACAGATGTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRSSCLS*RTDVSC
Trigger: GCAGGACACATCTGTTCTTCAGCTCAAACAAGAGCT...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGGAGTTCTGGGTGACTTaGCCCGAACCTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SVLHTSAQKAPLALETGMEFWVT*PEPFFL
Trigger: AAGAAAGAAAGGTTCGGGTCAAGTCACCCAGAACTC...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGCAGGATCCAGTGCTTTaGAGTGATACCGGTGATTTC +
Preference number: 4 (lower is better)
Translates to: SVLHTSAQKAPLALETGMQDPVL*SDTGDF
Trigger: GAAATCACCGGTATCACTTCAAAGCACTGGATCCTG...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCACAGGATCCAGTGCTTTaGAGTGATACCGGTGATTTC +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSQDPVL*SDTGDF
Trigger: GAAATCACCGGTATCACTTCAAAGCACTGGATCCTG...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGATTTTTATGGAGGCACTaGGGCCATGCAGCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRFLWRH*GHAAPF
Trigger: AAAAGGAGCTGCATGGCCTCAGTGCCTCCATAAAAA...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCACTTTGGAAACTGGAATaGGGATCACCAACAGGATCC +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSLWKLE*GSPTGS
Trigger: GGATCCTGTTGGTGATCCTCATTCCAGTTTCCAAAG...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTAGTGGATTGGACTGGGTaGAGTCAGGCATTTGACTTG +
Preference number: 4 (lower is better)
Translates to: RGDELETDRSRTQNRCVLVDWTG*SQAFDL
Trigger: CAAGTCAAATGCCTGACTTCACCCAGTCCAATCCAC...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS-3UTR GCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTAAATCTCGATGAGATATaGCAGGATCACCCCATCCCG +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVNLDEI*QDHPIP
Trigger: CGGGATGGGGTGATCCTGGCATATCTCATCGAGATT...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR GCA 90 bp CCTTCCTACCCTCCTACTAGCACAAACCCACAAAGCACTGCTAAGGGGTATCCCTTAGCCGAAGTCTGGTaGATACGAATCTTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: PSYPPTSTNPQSTAKGYPLAEVW*IRIFLE
Trigger: CTCTAAAAAGATTCGTATGCACCAGACTTCGGCTAA...GGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGCTAGTAGGAGGGTAGGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR GCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTAATGGACTCGCTCTTTaGACTGTGGATTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCNGLAL*TVDWTG
Trigger: CCCAGTCCAATCCACAGTGCAAAGAGCGAGTCCATT...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGAGTTGGTCGCCTCATCTaGCTCTCTTTTCATACAGTG +
Preference number: 4 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRVGRLI*LSFHTV
Trigger: CACTGTATGAAAAGAGAGGCAGATGAGGCGACCAAC...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGAGTAGCTCCTTTTCCTaGCGTTGGAAGGAGAAAACC +
Preference number: 4 (lower is better)
Translates to: SVLHTSAQKAPLALETGMSSSFS*RWKEKT
Trigger: GGTTTTCTCCTTCCAACGGCAGGAAAAGGAGCTACT...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTAGCTGTTGCGCAGGCTaGGGAGAGCATCTCGAACAA +
Preference number: 4 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPSCCAG*GEHLEQ
Trigger: TTGTTCGAGATGCTCTCCGCAGCCTGCGCAACAGCT...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCAGTCTTGCATACTTCTaGTCAGAAGGCTCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVSLAYF*SEGSSR
Trigger: GCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACT...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTTCGCTCTTTGCACTGTaGATTGGACTGGGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCSLFAL*IGLGEV
Trigger: GACTTCACCCAGTCCAATCCACAGTGCAAAGAGCGA...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGAGCCTTCTCTTCTGACTaGGTTATAATGGACTCGCTC +
Preference number: 4 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRAFSSD*VIMDSL
Trigger: GAGCGAGTCCATTATAACCCAGTCAGAAGAGAAGGC...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp AGTAGAATAGAACACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGGTGCTTCTTCTAACTTaGCCTGGTGCTGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: SRIEHCVPTDKELQMNPWVLLLT*PGAAEE
Trigger: TTCTTCAGCAGCACCAGGCCAAGTTAGAAGAAGCAC...CCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTGTTCTATTCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTATGTGACTGTTGTAGTTaGTCGCCTCATCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVCDCCS*SPHLPL
Trigger: GAGAGGCAGATGAGGCGACCAACTACAACAGTCACA...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGACTTGGTCATTACCTGTaGTACATGAGATTACCGAGC +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGLGHYL*YMRLPS
Trigger: GCTCGGTAATCTCATGTACCACAGGTAATGACCAAG...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp ATGAGCTTTACACAGACTTTTCCGGCCTTAAGAGTTACACTTAGGCTCAAGGACAATGATGGGTCCGTCTaGTTCAGCATCTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: MSFTQTFPALRVTLRLKDNDGSV*FSISVP
Trigger: GGGGACAGAGATGCTGAACCAGACGGACCCATCATT...GTCCTTGAGCCTAAGTGTAACTCTTAAGGCCGGAAAAGTCTGTGTAAAGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACACTTGCGTCCCTCCCATaGTCCCCCTCCTGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTLASLP*SPSCLG
Trigger: CCCGAGACAGGAGGGGGACCATGGGAGGGACGCAAG...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS-3UTR TCA 90 bp CAAAGCACTGCTAAGGGGTATCCCTTTAAAGCCAAACATAAACTGAGGGGAGAAAAAGACATCCCGTCCTaGTCGGGACATGTCATGACA +
Preference number: 4 (lower is better)
Translates to: QSTAKGYPFKAKHKLRGEKDIPS*SGHVMT
Trigger: TGTCATGACATGTCCCGATCAGGACGGGATGTCTTT...TTCTCCCCTCAGTTTATGTTTGGCTTTAAAGGGATACCCCTTAGCAGTGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR TCA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGAATCTGCCTTCTCTTCTaGCTGGGTTATAATGGACTC +
Preference number: 4 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRICLLF*LGYNGL
Trigger: GAGTCCATTATAACCCAGTCAGAAGAGAAGGCAGAT...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACAGAGGATCGTGGCCACTaGAGCTGTTGCGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTEDRGH*SCCAGC
Trigger: GCAGCCTGCGCAACAGCTTCAGTGGCCACGATCCTC...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTAGAGTTCTGGGTGACTTaGCCCGAACCTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVEFWVT*PEPFFL
Trigger: AAGAAAGAAAGGTTCGGGTCAAGTCACCCAGAACTC...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTCCTTTGCCTTGTCTGTaGGTACAAACGCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPPLPCL*VQTLGL
Trigger: GAGTCCCAGCGTTTGTACTCACAGACAAGGCAAAGG...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGAACTCTGGCCTTGAAATaGGGGGCAGACAAGTACTTC +
Preference number: 4 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGTLALK*GADKYF
Trigger: GAAGTACTTGTCTGCCCCTCATTTCAAGGCCAGAGT...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCGTTAGCTTCTTCACTTaGCAATGTTGCACATCAGAA +
Preference number: 4 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLVSFFT*QCCTSE
Trigger: TTCTGATGTGCAACATTGTCAAGTGAAGAAGCTAAC...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCACTGGTTGATGGTGCTTaGTGGATGAATGAGAAAACC +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSLVDGA*WMNEKT
Trigger: GGTTTTCTCATTCATCCATCAAGCACCATCAACCAG...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGAGAGAAATTGGTGACATaGGGACTTTTTCTCCAGACT +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGEKLVT*GLFLQT
Trigger: AGTCTGGAGAAAAAGTCCTCATGTCACCAATTTCTC...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTATTTTTATGGAGGCACTaGGGCCATGCAGCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: RGDELETDRSRTQNRCVLFLWRH*GHAAPF
Trigger: AAAAGGAGCTGCATGGCCTCAGTGCCTCCATAAAAA...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp ACTAGCACAAACCCACAAAGCACTGCTAAGGGGTATCCCTTTAAAGCCAAACATCCTCTTCTTCAGCTGTaGATTCACCCAGGCCACATA +
Preference number: 4 (lower is better)
Translates to: TSTNPQSTAKGYPFKAKHPLLQL*IHPGHI
Trigger: TATGTGGCCTGGGTGAATGCACAGCTGAAGAAGAGG...ATGTTTGGCTTTAAAGGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR GCA 90 bp GCACAAACCCACAAAGCACTGCTAAGGGGTATCCCTTTAAAGCCAAACATAAACAATCTCGATGAGATATaGCAGGATCACCCCATCCCG +
Preference number: 4 (lower is better)
Translates to: AQTHKALLRGIPLKPNINNLDEI*QDHPIP
Trigger: CGGGATGGGGTGATCCTGGCATATCTCATCGAGATT...GTTTATGTTTGGCTTTAAAGGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR GCA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCACTCAGCTTTTCTCCTaGAACAATCTCGATGAGATA +
Preference number: 4 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLTQLFS*NNLDEI
Trigger: TATCTCATCGAGATTGTTGCAGGAGAAAAGCTGAGT...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR GCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTAGTAGCTCCTTTTCCTaGCGTTGGAAGGAGAAAACC +
Preference number: 4 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCSSSFS*RWKEKT
Trigger: GGTTTTCTCCTTCCAACGGCAGGAAAAGGAGCTACT...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCAGGCTAGAAATGCCCTaGTCCAAGCTGTCAATAGTG +
Preference number: 4 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVRLEMP*SKLSIV
Trigger: CACTATTGACAGCTTGGAGCAGGGCATTTCTAGCCT...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTAAGGCTAGAAATGCCCTaGTCCAAGCTGTCAATAGTG +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVRLEMP*SKLSIV
Trigger: CACTATTGACAGCTTGGAGCAGGGCATTTCTAGCCT...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTAGACCTGTGGCCATCATaGTTGGAGAAGCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVDLWPS*LEKLLF
Trigger: AAACAGAAGCTTCTCCAAGCATGATGGCCACAGGTC...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTAGGAGGCCTCCTAGAATaGAGCCAAATAGGAAACTGT +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVGGLLE*SQIGNC
Trigger: ACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCC...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp TTTTGCTTGTTGTATTGTTACTTGAAGCCGAGAACTCCGAGAATCCTCCAGAATGACAGGTTCCAGCCATaGCCCCATGTGGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: FCLLYCYLKPRTPRILQNDRFQP*PHVVTV
Trigger: AACTGTGACCACATGGGGGCATGGCTGGAACCTGTC...ATTCTGGAGGATTCTCGGAGTTCTCGGCTTCAAGTAACAATACAACAAGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGACCGCACACTCCAGTATaGATTCTCAATTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRPHTPV*ILNFLI
Trigger: GATGAGGAAATTGAGAATCCATACTGGAGTGTGCGG...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CCA 90 bp AGTAGAATAGAACACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTGCAGATCCACATTCTaGTTGTGCAGCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: SRIEHCVPTDKELQMNPWCRSTF*LCSSSL
Trigger: CAAAGATGAGCTGCACAACCAGAATGTGGATCTGCA...CCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTGTTCTATTCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTAGTGCTTCTTCTAACTTaGCCTGGTGCTGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: RGDELETDRSRTQNRCVLVLLLT*PGAAEE
Trigger: TTCTTCAGCAGCACCAGGCCAAGTTAGAAGAAGCAC...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp AGTAGAATAGAACACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGCTCCTCCAACCTCTTTaGTATATTGACCATGAAGGG +
Preference number: 4 (lower is better)
Translates to: SRIEHCVPTDKELQMNPWLLQPL*YIDHEG
Trigger: CCCTTCATGGTCAATATACCAAAGAGGTTGGAGGAG...CCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTGTTCTATTCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGCTCCTCCAACCTCTTTaGTATATTGACCATGAAGGG +
Preference number: 4 (lower is better)
Translates to: SVLHTSAQKAPLALETGMLLQPL*YIDHEG
Trigger: CCCTTCATGGTCAATATACCAAAGAGGTTGGAGGAG...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTATGTGAGTACAAACGCTaGGACTCTGATTGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVCEYKR*DSDCCN
Trigger: GTTGCAGCAATCAGAGTCCCAGCGTTTGTACTCACA...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGAAGCACCATCCACGTCTaGTTCAAAAGATTACTGAAG +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGSTIHV*FKRLLK
Trigger: CTTCAGTAATCTTTTGAACCAGACGTGGATGGTGCT...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp AGTAGAATAGAACACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGCTTTCCATACCCGCCTaGATTTTCAAGGAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SRIEHCVPTDKELQMNPWLSIPA*IFKELF
Trigger: GAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAG...CCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTGTTCTATTCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCATTTGGCAGTGTACATTaGAGGTCACAGGCAGATAGA +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSFGSVH*RSQADR
Trigger: TCTATCTGCCTGTGACCTCCAATGTACACTGCCAAA...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGATCTAGCAGAGATGCTTaGTCATTACCTGTGGTACAT +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGSSRDA*SLPVVH
Trigger: ATGTACCACAGGTAATGACCAAGCATCTCTGCTAGA...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGTCTCGCTTTGGAAACTaGAATGAGGATCACCAACAG +
Preference number: 4 (lower is better)
Translates to: SVLHTSAQKAPLALETGMSRFGN*NEDHQQ
Trigger: CTGTTGGTGATCCTCATTCCAGTTTCCAAAGCGAGA...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGATCTCGCTTTGGAAACTaGAATGAGGATCACCAACAG +
Preference number: 4 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRSRFGN*NEDHQQ
Trigger: CTGTTGGTGATCCTCATTCCAGTTTCCAAAGCGAGA...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp ATAAACACTGGCACCTCATATGCAAATGTCAGAACCACTGGACTGGGCCCTGACTTGAGAAGGCTCTGTTaGCAGCAAGGAGTTATTGAA +
Preference number: 4 (lower is better)
Translates to: INTGTSYANVRTTGLGPDLRRLC*QQGVIE
Trigger: TTCAATAACTCCTTGCTGCCAACAGAGCCTTCTCAA...GTCAGGGCCCAGTCCAGTGGTTCTGACATTTGCATATGAGGTGCCAGTGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp CTAGCACAAACCCACAAAGCACTGCTAAGGGGTATCCCTTTAAAGCCAAACATAGTCACAGTTAAGCACTaGCACTGGGACTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: LAQTHKALLRGIPLKPNIVTVKH*HWDCTD
Trigger: ATCTGTGCAGTCCCAGTGCCAGTGCTTAACTGTGAC...TATGTTTGGCTTTAAAGGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp GTTCCTGTAGAGGAAAGTTGGAAACATTCTAATGCTCTAAGACAACTCTGCTCAAGCCATGCCCCCATGTaGTCACAGTTAAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: VPVEESWKHSNALRQLCSSHAPM*SQLSTG
Trigger: GCCAGTGCTTAACTGTGACCACATGGGGGCATGGCT...TGAGCAGAGTTGTCTTAGAGCATTAGAATGTTTCCAACTTTCCTCTACAGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529225.5
3UTR CAA 72 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTaGGCAGTGTACATTGGAGGTCACAGGCAGATAGAC +
Preference number: 4 (lower is better)
Translates to: SRTQNRCVLLLC*AVYIGGHRQID
Trigger: GTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTAATCTGCCTTCTCTTCTaGCTGGGTTATAATGGACTC +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVICLLF*LGYNGL
Trigger: GAGTCCATTATAACCCAGTCAGAAGAGAAGGCAGAT...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTATATTCACTACCTACTTaGGTTCTGGGTGACTTGACC +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVYSLPT*VLGDLT
Trigger: GGTCAAGTCACCCAGAACTCAAGTAGGTAGTGAATA...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTTATTCACTACCTACTTaGGTTCTGGGTGACTTGACC +
Preference number: 4 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCYSLPT*VLGDLT
Trigger: GGTCAAGTCACCCAGAACTCAAGTAGGTAGTGAATA...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTGGAAAATCTCCTCTTTaGCAGTGCCAAACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCGKSPL*QCQTQD
Trigger: ATCCTGAGTTTGGCACTGTCAAAGAGGAGATTTTCC...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCGGAAAATCTCCTCTTTaGCAGTGCCAAACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVGKSPL*QCQTQD
Trigger: ATCCTGAGTTTGGCACTGTCAAAGAGGAGATTTTCC...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGAGGTTCAAAAGATTACTaGAGTCTGGGCTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGGSKDY*SLGFHL
Trigger: AAGATGAAAGCCCAGACTTCAGTAATCTTTTGAACC...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGAAAAACTAACAGTACATaGAATAGGCCCTATGTGGGC +
Preference number: 4 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRKTNST*NRPYVG
Trigger: GCCCACATAGGGCCTATTTCATGTACTGTTAGTTTT...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGATGCTTGATGGATGAATaGGAAAACCCAGGTTATCAA +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGCLMDE*ENPGYQ
Trigger: TTGATAACCTGGGTTTTCTCATTCATCCATCAAGCA...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGTAGAATAGAACACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGATGGTGCTTGATGGATaGATGAGAAAACCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: SRIEHCVPTDKELQMNPWMVLDG*MRKPRL
Trigger: TAACCTGGGTTTTCTCATTCATCCATCAAGCACCAT...CCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTGTTCTATTCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTGGTTGATGGTGCTTaGTGGATGAATGAGAAAACC +
Preference number: 4 (lower is better)
Translates to: RGDELETDRSRTQNRCVLLVDGA*WMNEKT
Trigger: GGTTTTCTCATTCATCCATCAAGCACCATCAACCAG...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTCCTCTTCTTCAGCTGTaGATTCACCCAGGCCACATA +
Preference number: 4 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPPLLQL*IHPGHI
Trigger: TATGTGGCCTGGGTGAATGCACAGCTGAAGAAGAGG...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR GCA 90 bp GAAAGTTGGAAACATTCTAATGCTCTAAGACAACTCTGCTCAATTTCTTCTCTTTGCCCTTCGTACTGCTaGACTAGGGCCCGCACACTC +
Preference number: 4 (lower is better)
Translates to: ESWKHSNALRQLCSISSLCPSYC*TRARTL
Trigger: GAGTGTGCGGGCCCTAGTGCAGCAGTACGAAGGGCA...AAGAGAAGAAATTGAGCAGAGTTGTCTTAGAGCATTAGAATGTTTCCAACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR GCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCATCCACATTCTGGTTGTaGAGCTCATCTTTGTCCATA +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSSTFWL*SSSLSI
Trigger: TATGGACAAAGATGAGCTGCACAACCAGAATGTGGA...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp AGTAGAATAGAACACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCCACATTCTGGTTGTaGAGCTCATCTTTGTCCATA +
Preference number: 4 (lower is better)
Translates to: SRIEHCVPTDKELQMNPWSTFWL*SSSLSI
Trigger: TATGGACAAAGATGAGCTGCACAACCAGAATGTGGA...CCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTGTTCTATTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGAGTTGGTCGCCTCATCTaGCTCTCTTTTCATACAGTG +
Preference number: 4 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGVGRLI*LSFHTV
Trigger: CACTGTATGAAAAGAGAGGCAGATGAGGCGACCAAC...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp AGTAGAATAGAACACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTTTAAGTACCAGATATaGCAGGCACAGAAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: SRIEHCVPTDKELQMNPWFKYQI*QAQKED
Trigger: GTCCTCTTTCTGTGCCTGGCATATCTGGTACTTAAA...CCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTGTTCTATTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGTTTAAGTACCAGATATaGCAGGCACAGAAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: SVLHTSAQKAPLALETGMFKYQI*QAQKED
Trigger: GTCCTCTTTCTGTGCCTGGCATATCTGGTACTTAAA...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp CTAATTTGCAACCATCCTGGTCAAAAAGAGCTGAAAAGTTGGTCAGTAAGTAGATTTGCAGAGGGGCTCTaGAGTCCCGTCCTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LICNHPGQKELKSWSVSRFAEGL*SPVLGS
Trigger: TGAACCAAGGACGGGACTCCAGAGCCCCTCTGCAAA...TCTACTTACTGACCAACTTTTCAGCTCTTTTTGACCAGGATGGTTGCAAATTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTCTCGGGATTGACACCTaGTTCACAGAGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: ENPGYQIISVVELLASSLLGIDT*FTEGQG
Trigger: CCCTTGGCCCTCTGTGAACCAGGTGTCAATCCCGAG...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTAAGAGGACTGACCTGTaGCCATCATGCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPKRTDL*PSCLEK
Trigger: CTTCTCCAAGCATGATGGCCACAGGTCAGTCCTCTT...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGATGTGAGTACAAACGCTaGGACTCTGATTGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGCEYKR*DSDCCN
Trigger: GTTGCAGCAATCAGAGTCCCAGCGTTTGTACTCACA...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCACTGGGCTTTCATCTTTaGTACCACCTCATGAGTTAT +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSLGFHL*YHLMSY
Trigger: ATAACTCATGAGGTGGTACCAAAGATGAAAGCCCAG...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCAAGCACCATCCACGTCTaGTTCAAAAGATTACTGAAG +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSSTIHV*FKRLLK
Trigger: CTTCAGTAATCTTTTGAACCAGACGTGGATGGTGCT...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTACTTTCCATACCCGCCTaGATTTTCAAGGAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVLSIPA*IFKELF
Trigger: GAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAG...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGAATAATAATGGCTGACTaGTTGATGGTGCTTGATGGA +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGIIMAD*LMVLDG
Trigger: TCCATCAAGCACCATCAACCAGTCAGCCATTATTAT...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTATTTGGCAGTGTACATTaGAGGTCACAGGCAGATAGA +
Preference number: 4 (lower is better)
Translates to: RGDELETDRSRTQNRCVLFGSVH*RSQADR
Trigger: TCTATCTGCCTGTGACCTCCAATGTACACTGCCAAA...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp ATAAACACTGGCACCTCATATGCAAATGTCAGAACCACTGGACTGGGCCCTGACGGCTATCATAAACACTaGCACCTCATATGCAAATGT +
Preference number: 4 (lower is better)
Translates to: INTGTSYANVRTTGLGPDGYHKH*HLICKC
Trigger: ACATTTGCATATGAGGTGCCAGTGTTTATGATAGCC...GTCAGGGCCCAGTCCAGTGGTTCTGACATTTGCATATGAGGTGCCAGTGTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529225.5
3UTR CAA 72 bp CAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCTaGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTG +
Preference number: 4 (lower is better)
Translates to: QPNRKLFQTESV*HTSAQKAPLAL
Trigger: CAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACAGCAGCTGTTGCTCATTaGAGCCCTCCTGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTAAVAH*SPPAGR
Trigger: ACGTCCTGCAGGAGGGCTTCAATGAGCAACAGCTGC...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR TCA 90 bp GTTCCTGTAGAGGAAAGTTGGAAACATTCTAATGCTCTAAGACAACTCTGCTCACTGCAACAATCTCGATaGGATATGCCAGGATCACCC +
Preference number: 4 (lower is better)
Translates to: VPVEESWKHSNALRQLCSLQQSR*DMPGSP
Trigger: GGGTGATCCTGGCATATCTCATCGAGATTGTTGCAG...TGAGCAGAGTTGTCTTAGAGCATTAGAATGTTTCCAACTTTCCTCTACAGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR TCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTGTTGTTCCTCGGGATTaGCACCTGGTTCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: ENPGYQIISVVELLASSLVVPRD*HLVHRG
Trigger: CCCTCTGTGAACCAGGTGTCAATCCCGAGGAACAAC...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGCATAAGCCCTCAATCTaGTACTTGGCATTAATTCTC +
Preference number: 4 (lower is better)
Translates to: SVLHTSAQKAPLALETGMHKPSI*YLALIL
Trigger: GAGAATTAATGCCAAGTATCAGATTGAGGGCTTATG...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTATTTGGTACCACCTCATaGGTTATTCTTGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVFGTTS*VILGLQ
Trigger: CTGCAAACCAAGAATAACTCATGAGGTGGTACCAAA...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCTTTGGTACCACCTCATaGGTTATTCTTGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVFGTTS*VILGLQ
Trigger: CTGCAAACCAAGAATAACTCATGAGGTGGTACCAAA...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTAAAACTAACAGTACATaGAATAGGCCCTATGTGGGC +
Preference number: 4 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCKTNST*NRPYVG
Trigger: GCCCACATAGGGCCTATTTCATGTACTGTTAGTTTT...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCATGGTGCTTGATGGATaGATGAGAAAACCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVMVLDG*MRKPRL
Trigger: TAACCTGGGTTTTCTCATTCATCCATCAAGCACCAT...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGACATTCTTTCTTTTGCTaGCTTTCCCAAACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRHSFFC*LSQTFP
Trigger: TGGGAAAGTTTGGGAAAGTCAGCAAAAGAAAGAATG...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGTAGAATAGAACACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGCATTCTTTCTTTTGCTaGCTTTCCCAAACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SRIEHCVPTDKELQMNPWHSFFC*LSQTFP
Trigger: TGGGAAAGTTTGGGAAAGTCAGCAAAAGAAAGAATG...CCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTGTTCTATTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACAACAGAGAAATTGGTaGCATGAGGACTTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: RGDELETDRSRTQNRCVLQQRNW*HEDFFS
Trigger: GGAGAAAAAGTCCTCATGTCACCAATTTCTCTGTTG...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTCAACAGAGAAATTGGTaGCATGAGGACTTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCQQRNW*HEDFFS
Trigger: GGAGAAAAAGTCCTCATGTCACCAATTTCTCTGTTG...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTAATTACCTGTGGTACATaGGATTACCGAGCTAAAAGG +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVITCGT*DYRAKR
Trigger: CCTTTTAGCTCGGTAATCTCATGTACCACAGGTAAT...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACATGTTGCCCTTCGTACTaGTGCACTAGGGCCCGCACA +
Preference number: 4 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTCCPSY*CTRART
Trigger: TGTGCGGGCCCTAGTGCAGCAGTACGAAGGGCAACA...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR GCA 90 bp GAAAGTTGGAAACATTCTAATGCTCTAAGACAACTCTGCTCAATTTCTTCTCTTTGTTGCCCTTCGTACTaGTGCACTAGGGCCCGCACA +
Preference number: 4 (lower is better)
Translates to: ESWKHSNALRQLCSISSLCCPSY*CTRART
Trigger: TGTGCGGGCCCTAGTGCAGCAGTACGAAGGGCAACA...AAGAGAAGAAATTGAGCAGAGTTGTCTTAGAGCATTAGAATGTTTCCAACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR GCA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGATCATCTAGCTTCCTCTaGAGATCCACATTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGSSSFL*RSTFWL
Trigger: CAACCAGAATGTGGATCTGCAGAGGAAGCTAGATGA...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTGACCTGTGGCCATCATaGTTGGAGAAGCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPDLWPS*LEKLLF
Trigger: AAACAGAAGCTTCTCCAAGCATGATGGCCACAGGTC...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp AGTAGAATAGAACACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGAAAAGCTGGTACCTTTaGCTTGTCTGTGAGTACAAA +
Preference number: 4 (lower is better)
Translates to: SRIEHCVPTDKELQMNPWKSWYL*LVCEYK
Trigger: TTTGTACTCACAGACAAGGCAAAGGTACCAGCTTTT...CCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTGTTCTATTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTACCCAGAATGATCCCTaGCATTCACAACTCATGCTC +
Preference number: 4 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPTQNDP*HSQLML
Trigger: GAGCATGAGTTGTGAATGGCAGGGATCATTCTGGGT...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCAAAACAGAATCAGTCTTaGATACTTCTGCTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSKQNQS*ILLLRR
Trigger: CCTTCTGAGCAGAAGTATGCAAGACTGATTCTGTTT...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp CTAATTTGCAACCATCCTGGTCAAAAAGAGCTGAAAAGTTGGTCAGTAAGTAGAGCTACCCCACACCAATaGCACCAGGCGACAATACTA +
Preference number: 4 (lower is better)
Translates to: LICNHPGQKELKSWSVSRATPHQ*HQATIL
Trigger: TAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTAGC...TCTACTTACTGACCAACTTTTCAGCTCTTTTTGACCAGGATGGTTGCAAATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CCA 90 bp ATGAGCTTTACACAGACTTTTCCGGCCTTAAGAGTTACACTTAGGCTCAAGGACCCGCACACTCCAGTATaGATTCTCAATTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: MSFTQTFPALRVTLRLKDPHTPV*ILNFLI
Trigger: GATGAGGAAATTGAGAATCCATACTGGAGTGTGCGG...GTCCTTGAGCCTAAGTGTAACTCTTAAGGCCGGAAAAGTCTGTGTAAAGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTTGGGTGAAGTCAGGCTaGAGCAGCTGGATTCAGACG +
Preference number: 4 (lower is better)
Translates to: ENPGYQIISVVELLASSLWVKSG*SSWIQT
Trigger: CGTCTGAATCCAGCTGCTCCAGCCTGACTTCACCCA...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTGCCTTCTCTTCTGACTaGGTTATAATGGACTCGCTC +
Preference number: 4 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPAFSSD*VIMDSL
Trigger: GAGCGAGTCCATTATAACCCAGTCAGAAGAGAAGGC...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGAATGGCATCATCATCATaGAAAATCTCCTCTTTGACA +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGMASSS*KISSLT
Trigger: TGTCAAAGAGGAGATTTTCCATGATGATGATGCCAT...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGAAGAAACAGAAAAGCTaGTACCTTTGCCTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SVLHTSAQKAPLALETGMKKQKS*YLCLVC
Trigger: ACAGACAAGGCAAAGGTACCAGCTTTTCTGTTTCTT...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp AGTAGAATAGAACACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGAAGATTACTGAAGTCTaGGCTTTCATCTTTGGTACC +
Preference number: 4 (lower is better)
Translates to: SRIEHCVPTDKELQMNPWKITEV*AFIFGT
Trigger: GGTACCAAAGATGAAAGCCCAGACTTCAGTAATCTT...CCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTGTTCTATTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCAAAGATTACTGAAGTCTaGGCTTTCATCTTTGGTACC +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSKITEV*AFIFGT
Trigger: GGTACCAAAGATGAAAGCCCAGACTTCAGTAATCTT...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCTCTAGCAGAGATGCTTaGTCATTACCTGTGGTACAT +
Preference number: 4 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVSSRDA*SLPVVH
Trigger: ATGTACCACAGGTAATGACCAAGCATCTCTGCTAGA...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGATCTCTTTTCATACAGTaGGCCAAGAGGACATCTTTG +
Preference number: 4 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGSLFIQ*AKRTSL
Trigger: CAAAGATGTCCTCTTGGCTCACTGTATGAAAAGAGA...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTAGTTAGCTTCTTCACTTaGCAATGTTGCACATCAGAA +
Preference number: 4 (lower is better)
Translates to: RGDELETDRSRTQNRCVLVSFFT*QCCTSE
Trigger: TTCTGATGTGCAACATTGTCAAGTGAAGAAGCTAAC...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGTAGAATAGAACACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGAATAATCTCGGTAGTTaGACTGTTAGCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: SRIEHCVPTDKELQMNPWNNLGS*TVSFFT
Trigger: AGTGAAGAAGCTAACAGTTCAACTACCGAGATTATT...CCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTGTTCTATTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTACATCAAGTATCTTTTaGGCTCCTTCTCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPTSSIF*APSLCQ
Trigger: CTGGCAGAGAGAAGGAGCTCAAAAGATACTTGATGT...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTTTTACACAGGAGTTATaGGAGTTACATCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCFTQEL*ELHPLA
Trigger: TGCTAGAGGATGTAACTCTCATAACTCCTGTGTAAA...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTATTTACACAGGAGTTATaGGAGTTACATCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVFTQEL*ELHPLA
Trigger: TGCTAGAGGATGTAACTCTCATAACTCCTGTGTAAA...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CTAGCACAAACCCACAAAGCACTGCTAAGGGGTATCCCTTTAAAGCCAAACATATGTTGTATTGTTACTTaGAGCCGAGAACTCCGAGAA +
Preference number: 4 (lower is better)
Translates to: LAQTHKALLRGIPLKPNICCIVT*SRELRE
Trigger: TTCTCGGAGTTCTCGGCTTCAAGTAACAATACAACA...TATGTTTGGCTTTAAAGGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR GCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTATTAGCCGAAGTCTGGTaGATACGAATCTTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: RGDELETDRSRTQNRCVLLAEVW*IRIFLE
Trigger: CTCTAAAAAGATTCGTATGCACCAGACTTCGGCTAA...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR GCA 90 bp ATGAGCTTTACACAGACTTTTCCGGCCTTAAGAGTTACACTTAGGCTCAAGGACTTTCCTCATCCATGCTaGTGTTCCTCTGTCTATATC +
Preference number: 4 (lower is better)
Translates to: MSFTQTFPALRVTLRLKDFPHPC*CSSVYI
Trigger: GATATAGACAGAGGAACAGCAGCATGGATGAGGAAA...GTCCTTGAGCCTAAGTGTAACTCTTAAGGCCGGAAAAGTCTGTGTAAAGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR GCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGAGCTTTTCACTCCTTATaGCTTTCAAACAAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGAFHSL*LSNKSS
Trigger: TGAACTTTTGTTTGAAAGGCATAAGGAGTGAAAAGC...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGACAGACAAGTACTTCATaGTCAGTACTTATAAATCAC +
Preference number: 4 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGQTSTS*SVLINH
Trigger: GTGATTTATAAGTACTGAGCATGAAGTACTTGTCTG...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp GCTATCATAAACACTGGCACCTCATATGCAAATGTCAGAACCACTGGACTGGGCGCTCTAAGACAACTCTaGTCAATTTCTTCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: AIINTGTSYANVRTTGLGALRQL*SISSLL
Trigger: TAGAAGAGAAGAAATTGAGCAGAGTTGTCTTAGAGC...GCCCAGTCCAGTGGTTCTGACATTTGCATATGAGGTGCCAGTGTTTATGATAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTCCGCATGCCACTTACTaGAAACCTAGACTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: ENPGYQIISVVELLASSLPHATY*KPRLEP
Trigger: TGGCTCCAGTCTAGGTTTCCAGTAAGTGGCATGCGG...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CCA 90 bp CTAATTTGCAACCATCCTGGTCAAAAAGAGCTGAAAAGTTGGTCAGTAAGTAGAAAGAGGACTGACCTGTaGCCATCATGCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LICNHPGQKELKSWSVSRKRTDL*PSCLEK
Trigger: CTTCTCCAAGCATGATGGCCACAGGTCAGTCCTCTT...TCTACTTACTGACCAACTTTTCAGCTCTTTTTGACCAGGATGGTTGCAAATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTAATAATAATGGCTGACTaGTTGATGGTGCTTGATGGA +
Preference number: 4 (lower is better)
Translates to: RGDELETDRSRTQNRCVLIIMAD*LMVLDG
Trigger: TCCATCAAGCACCATCAACCAGTCAGCCATTATTAT...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGAGTAGTTTGTTGAAATaGCTGAAAAGGGGAGATGAA +
Preference number: 4 (lower is better)
Translates to: SVLHTSAQKAPLALETGMSSLLK*LKRGDE
Trigger: TTCATCTCCCCTTTTCAGCCATTTCAACAAACTACT...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp GTTCCTGTAGAGGAAAGTTGGAAACATTCTAATGCTCTAAGACAACTCTGCTCAGTTAAGCACTGGCACTaGGACTGCACAGATTCCATT +
Preference number: 4 (lower is better)
Translates to: VPVEESWKHSNALRQLCSVKHWH*DCTDSI
Trigger: AATGGAATCTGTGCAGTCCCAGTGCCAGTGCTTAAC...TGAGCAGAGTTGTCTTAGAGCATTAGAATGTTTCCAACTTTCCTCTACAGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp TTTACACAGACTTTTCCGGCCTTAAGAGTTACACTTAGGCTCAAGGACAGCACACACTGTATCCTGTTTTaGTCTCTGTACTTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: FTQTFPALRVTLRLKDSTHCILF*SLYLAL
Trigger: TAGAGCCAAGTACAGAGACCAAAACAGGATACAGTG...TGTGCTGTCCTTGAGCCTAAGTGTAACTCTTAAGGCCGGAAAAGTCTGTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR TCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTAAAGACATCCCGTCCTaGTCGGGACATGTCATGACA +
Preference number: 4 (lower is better)
Translates to: ENPGYQIISVVELLASSLKDIPS*SGHVMT
Trigger: TGTCATGACATGTCCCGATCAGGACGGGATGTCTTT...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR TCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTCAGGTAAGGATCCATTaGGCAGTAAGGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: ENPGYQIISVVELLASSLQVRIH*AVRPVV
Trigger: GACTACAGGCCTTACTGCTCAATGGATCCTTACCTG...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACACCACCTGGTGGTAACTaGCATCAGAGAGTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTPPGGN*HQRVSG
Trigger: TCCGGAAACTCTCTGATGTCAGTTACCACCAGGTGG...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACAAAGGAGATGCCATaGGTTAAAGTCATGAAACAA +
Preference number: 4 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCTKEMP*VKVMKQ
Trigger: TTGTTTCATGACTTTAACTCATGGCATCTCCTTTGT...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CTAATTTGCAACCATCCTGGTCAAAAAGAGCTGAAAAGTTGGTCAGTAAGTAGACTTTGGAAACTGGAATaGGGATCACCAACAGGATCC +
Preference number: 4 (lower is better)
Translates to: LICNHPGQKELKSWSVSRLWKLE*GSPTGS
Trigger: GGATCCTGTTGGTGATCCTCATTCCAGTTTCCAAAG...TCTACTTACTGACCAACTTTTCAGCTCTTTTTGACCAGGATGGTTGCAAATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR GCA 90 bp ACTAGCACAAACCCACAAAGCACTGCTAAGGGGTATCCCTTTAAAGCCAAACATACTCAGCTTTTCTCCTaGAACAATCTCGATGAGATA +
Preference number: 4 (lower is better)
Translates to: TSTNPQSTAKGYPFKAKHTQLFS*NNLDEI
Trigger: TATCTCATCGAGATTGTTGCAGGAGAAAAGCTGAGT...ATGTTTGGCTTTAAAGGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR GCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTTTTCCTCATCCATGCTaGTGTTCCTCTGTCTATATC +
Preference number: 4 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPFPHPC*CSSVYI
Trigger: GATATAGACAGAGGAACAGCAGCATGGATGAGGAAA...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR GCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACATGCGTCTCCATAACATaGAGGCGCTCCATGAGGCTA +
Preference number: 4 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTCVSIT*RRSMRL
Trigger: TAGCCTCATGGAGCGCCTGCATGTTATGGAGACGCA...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCTCTTTAGCCGAAGTCTaGTGCATACGAATCTTTTTA +
Preference number: 4 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVSLAEV*CIRIFL
Trigger: TAAAAAGATTCGTATGCACCAGACTTCGGCTAAAGA...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTAAGAGGAGCAATCAACTaGATTACACAAAACTACCTT +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVRGAIN*ITQNYL
Trigger: AAGGTAGTTTTGTGTAATCCAGTTGATTGCTCCTCT...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTAGAGGAGCAATCAACTaGATTACACAAAACTACCTT +
Preference number: 4 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCRGAIN*ITQNYL
Trigger: AAGGTAGTTTTGTGTAATCCAGTTGATTGCTCCTCT...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCTACAATAATGAATTTTaGCCTGATAGCCCTCATGCT +
Preference number: 4 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVYNNEF*PDSPHA
Trigger: AGCATGAGGGCTATCAGGCCAAAATTCATTATTGTA...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCAATTAGTTCACAAATCTaGTACATACCGGCAGTTAAA +
Preference number: 4 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSISSQI*YIPAVK
Trigger: TTTAACTGCCGGTATGTACCAGATTTGTGAACTAAT...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CCA 90 bp GAAAGTTGGAAACATTCTAATGCTCTAAGACAACTCTGCTCAATTTCTTCTCTTGTTACCTGGAGCAGCTaGATTCAGACGGGGACCTTT +
Preference number: 4 (lower is better)
Translates to: ESWKHSNALRQLCSISSLVTWSS*IQTGTF
Trigger: AAAGGTCCCCGTCTGAATCCAGCTGCTCCAGGTAAC...AAGAGAAGAAATTGAGCAGAGTTGTCTTAGAGCATTAGAATGTTTCCAACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR TCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTTACTTGAGTTCTGGGTaGCTTGACCCGAACCTTTCT +
Preference number: 4 (lower is better)
Translates to: ENPGYQIISVVELLASSLYLSSG*LDPNLS
Trigger: AGAAAGGTTCGGGTCAAGTCACCCAGAACTCAAGTA...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGAACAAAGGAGATGCCATaGGTTAAAGTCATGAAACAA +
Preference number: 4 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGTKEMP*VKVMKQ
Trigger: TTGTTTCATGACTTTAACTCATGGCATCTCCTTTGT...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACAACTCTGGCCTTGAAATaGGGGGCAGACAAGTACTTC +
Preference number: 4 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTTLALK*GADKYF
Trigger: GAAGTACTTGTCTGCCCCTCATTTCAAGGCCAGAGT...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTGCTAATTTAGGGAACTaGGCAAGAAGAGAACATTCT +
Preference number: 4 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPANLGN*ARREHS
Trigger: AGAATGTTCTCTTCTTGCTCAGTTCCCTAAATTAGC...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR GCA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTCAGACAAGTACTTCATaGTCAGTACTTATAAATCAC +
Preference number: 4 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCQTSTS*SVLINH
Trigger: GTGATTTATAAGTACTGAGCATGAAGTACTTGTCTG...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTACCCAGAATGATCCCTaGCATTCACAACTCATGCTC +
Preference number: 4 (lower is better)
Translates to: ENPGYQIISVVELLASSLTQNDP*HSQLML
Trigger: GAGCATGAGTTGTGAATGGCAGGGATCATTCTGGGT...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGAATGGCATCATCATCATaGAAAATCTCCTCTTTGACA +
Preference number: 4 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGMASSS*KISSLT
Trigger: TGTCAAAGAGGAGATTTTCCATGATGATGATGCCAT...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTAAGAAACAGAAAAGCTaGTACCTTTGCCTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPKKQKS*YLCLVC
Trigger: ACAGACAAGGCAAAGGTACCAGCTTTTCTGTTTCTT...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTATGCTCCACGCCCCATaGTTTCTATTGTGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: ENPGYQIISVVELLASSLMLHAP*FLLCPK
Trigger: TTTAGGGCACAATAGAAACCATGGGGCGTGGAGCAT...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTAGGGTTCTCTAGAAAATaGATACAGTATACAGAATGT +
Preference number: 4 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVGFSRK*IQYTEC
Trigger: ACATTCTGTATACTGTATCCATTTTCTAGAGAACCC...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTAGGGTTCTCTAGAAAATaGATACAGTATACAGAATGT +
Preference number: 4 (lower is better)
Translates to: RGDELETDRSRTQNRCVLGFSRK*IQYTEC
Trigger: ACATTCTGTATACTGTATCCATTTTCTAGAGAACCC...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTGACAAGTAAAAACTaGTTTAAGAGACAGACATTC +
Preference number: 4 (lower is better)
Translates to: RGDELETDRSRTQNRCVLLTSKN*FKRQTF
Trigger: GAATGTCTGTCTCTTAAACCAGTTTTTACTTGTCAG...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp TTTTGCTTGTTGTATTGTTACTTGAAGCCGAGAACTCCGAGAATCCTCCAGAATAATCTCATAACCACTTaGGTCCCCATCTTCAAGAGT +
Preference number: 4 (lower is better)
Translates to: FCLLYCYLKPRTPRILQNNLITT*VPIFKS
Trigger: ACTCTTGAAGATGGGGACCCAAGTGGTTATGAGATT...ATTCTGGAGGATTCTCGGAGTTCTCGGCTTCAAGTAACAATACAACAAGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR TCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTAATAATCTCGGTAGTTaGACTGTTAGCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPNNLGS*TVSFFT
Trigger: AGTGAAGAAGCTAACAGTTCAACTACCGAGATTATT...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTACATCAAGTATCTTTTaGGCTCCTTCTCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ENPGYQIISVVELLASSLTSSIF*APSLCQ
Trigger: CTGGCAGAGAGAAGGAGCTCAAAAGATACTTGATGT...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACAGGAGGCCTCCTAGAATaGAGCCAAATAGGAAACTGT +
Preference number: 4 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTGGLLE*SQIGNC
Trigger: ACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCC...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTTGCAGATCCACATTCTaGTTGTGCAGCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: ENPGYQIISVVELLASSLCRSTF*LCSSSL
Trigger: CAAAGATGAGCTGCACAACCAGAATGTGGATCTGCA...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACAGAAATAGGCCCTATGTaGGCAAAAGGACAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTEIGPM*AKGQAA
Trigger: TGCAGCTTGTCCTTTTGCCCACATAGGGCCTATTTC...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp CTAATTTGCAACCATCCTGGTCAAAAAGAGCTGAAAAGTTGGTCAGTAAGTAGACATAAGCCCTCAATCTaGTACTTGGCATTAATTCTC +
Preference number: 4 (lower is better)
Translates to: LICNHPGQKELKSWSVSRHKPSI*YLALIL
Trigger: GAGAATTAATGCCAAGTATCAGATTGAGGGCTTATG...TCTACTTACTGACCAACTTTTCAGCTCTTTTTGACCAGGATGGTTGCAAATTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR TCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTATTACCTGTGGTACATaGGATTACCGAGCTAAAAGG +
Preference number: 4 (lower is better)
Translates to: ENPGYQIISVVELLASSLITCGT*DYRAKR
Trigger: CCTTTTAGCTCGGTAATCTCATGTACCACAGGTAAT...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR GCA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTGCTTTTCACTCCTTATaGCTTTCAAACAAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPAFHSL*LSNKSS
Trigger: TGAACTTTTGTTTGAAAGGCATAAGGAGTGAAAAGC...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTCTGGGCTTTCATCTTTaGTACCACCTCATGAGTTAT +
Preference number: 4 (lower is better)
Translates to: ENPGYQIISVVELLASSLLGFHL*YHLMSY
Trigger: ATAACTCATGAGGTGGTACCAAAGATGAAAGCCCAG...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACACTTGGTCATTACCTGTaGTACATGAGATTACCGAGC +
Preference number: 4 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTLGHYL*YMRLPS
Trigger: GCTCGGTAATCTCATGTACCACAGGTAATGACCAAG...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
3UTR CAA 72 bp ACACAACTTTTAGCTAGAGTCGCAAACATCATTAGTTaGCTCAAACACATACTAATCAGCCACAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: TQLLARVANIIS*LKHILISHSSC
Trigger: ACAGGAACTGTGGCTGATTAGTATGTGTTTGAGCAAACTAATGATGTTTGCGACTCTAGCTAAAAGTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
3UTR CAA 72 bp ACTGATAAGGTTTTTATTAGGGCACTGTATCCTGTTTaGGTCTCTGTACTTGGCTCTAAAGGATACACACAA +
Preference number: 4 (lower is better)
Translates to: TDKVFIRALYPV*VSVLGSKGYTQ
Trigger: TTGTGTGTATCCTTTAGAGCCAAGTACAGAGACCAAAACAGGATACAGTGCCCTAATAAAAACCTTATCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR TCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACATCTCTTTTCATACAGTaGGCCAAGAGGACATCTTTG +
Preference number: 4 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTSLFIQ*AKRTSL
Trigger: CAAAGATGTCCTCTTGGCTCACTGTATGAAAAGAGA...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTGGTTCAAAAGATTACTaGAGTCTGGGCTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: ENPGYQIISVVELLASSLGSKDY*SLGFHL
Trigger: AAGATGAAAGCCCAGACTTCAGTAATCTTTTGAACC...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTTGCTTGATGGATGAATaGGAAAACCCAGGTTATCAA +
Preference number: 4 (lower is better)
Translates to: ENPGYQIISVVELLASSLCLMDE*ENPGYQ
Trigger: TTGATAACCTGGGTTTTCTCATTCATCCATCAAGCA...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR TCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACAGAGAAATTGGTGACATaGGGACTTTTTCTCCAGACT +
Preference number: 4 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTEKLVT*GLFLQT
Trigger: AGTCTGGAGAAAAAGTCCTCATGTCACCAATTTCTC...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp CTAATTTGCAACCATCCTGGTCAAAAAGAGCTGAAAAGTTGGTCAGTAAGTAGAAATTTGCAACCATCCTaGTCAAAAAGAGCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: LICNHPGQKELKSWSVSRNLQPS*SKRAEK
Trigger: CTTTTCAGCTCTTTTTGACCAGGATGGTTGCAAATT...TCTACTTACTGACCAACTTTTCAGCTCTTTTTGACCAGGATGGTTGCAAATTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR GCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACAAAACAGAATCAGTCTTaGATACTTCTGCTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTKQNQS*ILLLRR
Trigger: CCTTCTGAGCAGAAGTATGCAAGACTGATTCTGTTT...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTAAAGTCAAAAAGATATaGGTAGCAGCACCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: ENPGYQIISVVELLASSLKVKKI*VAAPFH
Trigger: ATGGAAAGGTGCTGCTACCCATATCTTTTTGACTTT...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTTACAATAATGAATTTTaGCCTGATAGCCCTCATGCT +
Preference number: 4 (lower is better)
Translates to: ENPGYQIISVVELLASSLYNNEF*PDSPHA
Trigger: AGCATGAGGGCTATCAGGCCAAAATTCATTATTGTA...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACAAAAGAGCTGAAAAGTTaGTCAGTAAGTAGAAGTGCC +
Preference number: 4 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTKELKS*SVSRSA
Trigger: GGCACTTCTACTTACTGACCAACTTTTCAGCTCTTT...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR TCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACATGTAACACACAGGAATaGTGCATCCAATTCCTAATT +
Preference number: 4 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTCNTQE*CIQFLI
Trigger: AATTAGGAATTGGATGCATCATTCCTGTGTGTTACA...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp GAAAGTTGGAAACATTCTAATGCTCTAAGACAACTCTGCTCAATTTCTTCTCTTTCTTTAGCCGAAGTCTaGTGCATACGAATCTTTTTA +
Preference number: 4 (lower is better)
Translates to: ESWKHSNALRQLCSISSLSLAEV*CIRIFL
Trigger: TAAAAAGATTCGTATGCACCAGACTTCGGCTAAAGA...AAGAGAAGAAATTGAGCAGAGTTGTCTTAGAGCATTAGAATGTTTCCAACTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACAAAAGTCAAAAAGATATaGGTAGCAGCACCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTKVKKI*VAAPFH
Trigger: ATGGAAAGGTGCTGCTACCCATATCTTTTTGACTTT...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACAAGTAGTTTGTTGAAATaGCTGAAAAGGGGAGATGAA +
Preference number: 4 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTSSLLK*LKRGDE
Trigger: TTCATCTCCCCTTTTCAGCCATTTCAACAAACTACT...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CCA 90 bp AGAAGAGACTGTATAAAAGCTACTGGGTTCTCTAGAAAATGGATACAGTATACACTGACAAGTAAAAACTaGTTTAAGAGACAGACATTC +
Preference number: 4 (lower is better)
Translates to: RRDCIKATGFSRKWIQYTLTSKN*FKRQTF
Trigger: GAATGTCTGTCTCTTAAACCAGTTTTTACTTGTCAG...TGTATACTGTATCCATTTTCTAGAGAACCCAGTAGCTTTTATACAGTCTCTTCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS CCA 90 bp AGCCCCGCCCGACTCCAGCCAGCCAGAGCCAGCCCCTGCCGGCCTTaGTCCCGCCTCTGGCCCGCCGGATCCCGCCTCCTGCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: SPARLQPARASPCRP*SRLWPAGSRLLQAQ
Trigger: CTGGGCCTGCAGGAGGCGGGATCCGGCGGGCCAGAGGCGGGACCAAGGCCGGCAGGGGCTGGCTCTGGCTGGCTGGAGTCGGGCGGGGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS TCA 90 bp GCGGCGGCGGCGTCTCGGCCCCAGCGACTGGGATGCTCCAGGCTCTaGAGCGCGCAGTCCCGGCCGCTCAGACTGTGCAGCAGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: AAAASRPQRLGCSRL*SAQSRPLRLCSSPA
Trigger: GGCCGGGCTGCTGCACAGTCTGAGCGGCCGGGACTGCGCGCTTCAGAGCCTGGAGCATCCCAGTCGCTGGGGCCGAGACGCCGCCGCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS CCA 90 bp AGAAAGCGGGAACGGCGGCGGCGGCGGCGTCTCGGCCCCAGCGACTaGGATGCTCCAGGCTCTGAAGCGCGCAGTCCCGGCCGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: RKRERRRRRRLGPSD*DAPGSEARSPGRSD
Trigger: GTCTGAGCGGCCGGGACTGCGCGCTTCAGAGCCTGGAGCATCCCAGTCGCTGGGGCCGAGACGCCGCCGCCGCCGCCGTTCCCGCTTTCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS TCA 90 bp GGCCTGCCAGTGCTCTGGCTTTGCCGCGGTTTCCCGCTGCCATGGTaGTGCGGGGGCCGGCCACAAGCCCCGCCCGACTCCAGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: GLPVLWLCRGFPLPW*CGGRPQAPPDSSQP
Trigger: TGGCTGGCTGGAGTCGGGCGGGGCTTGTGGCCGGCCCCCGCATCACCATGGCAGCGGGAAACCGCGGCAAAGCCAGAGCACTGGCAGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS GCA 90 bp CTGAGCTCGGCCTGCCAGTGCTCTGGCTTTGCCGCGGTTTCCCGCTaGCATGGTGATGCGGGGGCCGGCCACAAGCCCCGCCCGACTCCA +
Preference number: 5 (lower is better)
Translates to: LSSACQCSGFAAVSR*HGDAGAGHKPRPTP
Trigger: TGGAGTCGGGCGGGGCTTGTGGCCGGCCCCCGCATCACCATGGCAGCGGGAAACCGCGGCAAAGCCAGAGCACTGGCAGGCCGAGCTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS TCA 90 bp GCAGCAGCTGCTCCCTGGGCAACAGCAGTGGCACAGTGTGGTCGGTaGCTTTGCAGAGGGGCTCTGGAGTCCCGTCCTTGGTTCACCGTC +
Preference number: 5 (lower is better)
Translates to: AAAAPWATAVAQCGR*LCRGALESRPWFTV
Trigger: GACGGTGAACCAAGGACGGGACTCCAGAGCCCCTCTGCAAAGTCACCGACCACACTGTGCCACTGCTGTTGCCCAGGGAGCAGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5
CDS TCA 90 bp GTCTCGGGCTTCAGCAAGCCTGCGTCCCCGGGTGAAGTGGGAGGCTaGGAGTCACATCGCTCCCAAATTCAGGCATGTCTCCCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: VSGFSKPASPGEVGG*ESHRSQIQACLPAL
Trigger: CAGCGCGGGGAGACATGCCTGAATTTGGGAGCGATGTGACTCTCAGCCTCCCACTTCACCCGGGGACGCAGGCTTGCTGAAGCCCGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS CCA 90 bp GACACACATCGGCCAGAGCAGCAGCTGCTCCCTGGGCAACAGCAGTaGCACAGTGTGGTCGGTGACTTTGCAGAGGGGCTCTGGAGTCCC +
Preference number: 5 (lower is better)
Translates to: DTHRPEQQLLPGQQQ*HSVVGDFAEGLWSP
Trigger: GGGACTCCAGAGCCCCTCTGCAAAGTCACCGACCACACTGTGCCACTGCTGTTGCCCAGGGAGCAGCTGCTGCTCTGGCCGATGTGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5
CDS GCA 90 bp CACCCCATCCCGGAGATCTTGTCGCAGGTCCTGCACAGGCTTCACTaGTGGCCTCTTCTTCAGCTGTGCATTCACCCAGGCCACATAGGC +
Preference number: 5 (lower is better)
Translates to: HPIPEILSQVLHRLH*WPLLQLCIHPGHIG
Trigger: GCCTATGTGGCCTGGGTGAATGCACAGCTGAAGAAGAGGCCAGCAGTGAAGCCTGTGCAGGACCTGCGACAAGATCTCCGGGATGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5
CDS CCA 90 bp GCTGAGAGTCACATCGCTCCCAAATTCAGGCATGTCTCCCCGCGCTaGGGCTGGAAAACGCCTCCACGGGAAGGCCAGCTAGCAAAGCTA +
Preference number: 5 (lower is better)
Translates to: AESHIAPKFRHVSPR*GWKTPPREGQLAKL
Trigger: TAGCTTTGCTAGCTGGCCTTCCCGTGGAGGCGTTTTCCAGCCCCAGCGCGGGGAGACATGCCTGAATTTGGGAGCGATGTGACTCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS GCA 90 bp GGCCACAGTTACCTGGAGCAGCTGGATTCAGACGGGGACCTTTGTTaGCCTTCGTACTGCTGCACTAGGGCCCGCACACTCCAGTATGGA +
Preference number: 5 (lower is better)
Translates to: GHSYLEQLDSDGDLC*PSYCCTRARTLQYG
Trigger: TCCATACTGGAGTGTGCGGGCCCTAGTGCAGCAGTACGAAGGGCAACAAAGGTCCCCGTCTGAATCCAGCTGCTCCAGGTAACTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CAA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTACCTGGCCGCTGCATCTaGGCCTCCGCGGACGCACGG +
Preference number: 5 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVPGRCI*ASADAR
Trigger: CCGTGCGTCCGCGGAGGCCAAGATGCAGCGGCCAGG...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS TCA 90 bp ATGAGGCTAGAAATGCCCTGCTCCAAGCTGTCAATAGTGTGGTGCTaGGGATCGTGGCCACTGAAGCTGTTGCGCAGGCTGCGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: MRLEMPCSKLSIVWC*GSWPLKLLRRLRRA
Trigger: TGCTCTCCGCAGCCTGCGCAACAGCTTCAGTGGCCACGATCCTCAGCACCACACTATTGACAGCTTGGAGCAGGGCATTTCTAGCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000440460.7
ENST00000526500.5
ENST00000530645.1
ENST00000615255.1
ENST00000618522.4
CDS GCA 90 bp TCGCAGGTCCTGCACAGGCTTCACTGCTGGCCTCTTCTTCAGCTGTaGATTCACCCAGGCCACATAGGCCTGCAGCTGTTGCTCATTGAA +
Preference number: 5 (lower is better)
Translates to: SQVLHRLHCWPLLQL*IHPGHIGLQLLLIE
Trigger: TTCAATGAGCAACAGCTGCAGGCCTATGTGGCCTGGGTGAATGCACAGCTGAAGAAGAGGCCAGCAGTGAAGCCTGTGCAGGACCTGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000528399.1
CDS-3UTR CAA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCTGGCCACTGAAGCTGTaGCGCAGGCTGCGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLWPLKL*RRLRRA
Trigger: TGCTCTCCGCAGCCTGCGCAACAGCTTCAGTGGCCA...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS TCA 90 bp CTCTGTCTATATCGAAAGACATCCCGTCCTGATCGGGACATGTCATaGCACACATCGGCCAGAGCAGCAGCTGCTCCCTGGGCAACAGCA +
Preference number: 5 (lower is better)
Translates to: LCLYRKTSRPDRDMS*HTSARAAAAPWATA
Trigger: TGCTGTTGCCCAGGGAGCAGCTGCTGCTCTGGCCGATGTGTGTCATGACATGTCCCGATCAGGACGGGATGTCTTTCGATATAGACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5
CDS GCA 90 bp CTGGAGCAGCTGGATTCAGACGGGGACCTTTGTTGCCCTTCGTACTaGTGCACTAGGGCCCGCACACTCCAGTATGGATTCTCAATTTCC +
Preference number: 5 (lower is better)
Translates to: LEQLDSDGDLCCPSY*CTRARTLQYGFSIS
Trigger: GGAAATTGAGAATCCATACTGGAGTGTGCGGGCCCTAGTGCAGCAGTACGAAGGGCAACAAAGGTCCCCGTCTGAATCCAGCTGCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000529225.5
CDS-3UTR CAA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGATCTCGGCTCAGCTCATaGGGATCCCTCCGGAGTCCC +
Preference number: 5 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGSRLSS*GSLRSP
Trigger: GGGACTCCGGAGGGATCCCAATGAGCTGAGCCGAGA...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CAA 90 bp CCTTCCTACCCTCCTACTAGCACAAACCCACAAAGCACTGCTAAGGGGTATCCCAGACGGGGACCTTTGTaGCCCTTCGTACTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: PSYPPTSTNPQSTAKGYPRRGPL*PFVLLH
Trigger: GTGCAGCAGTACGAAGGGCAACAAAGGTCCCCGTCT...GGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGCTAGTAGGAGGGTAGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS TCA 90 bp GAGTCCCGTCCTTGGTTCACCGTCCTGCTGGAGCCAGGTTTGAAATaGGCTGCCAAGGCAAGGACCAGCCTCATGATAGACTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: ESRPWFTVLLEPGLK*AAKARTSLMIDFRF
Trigger: AAACCTGAAGTCTATCATGAGGCTGGTCCTTGCCTTGGCAGCTCATTTCAAACCTGGCTCCAGCAGGACGGTGAACCAAGGACGGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5
CDS GCA 90 bp CCGTCCTTGGTTCACCGTCCTGCTGGAGCCAGGTTTGAAATGAGCTaGCAAGGCAAGGACCAGCCTCATGATAGACTTCAGGTTTCCATC +
Preference number: 5 (lower is better)
Translates to: PSLVHRPAGARFEMS*QGKDQPHDRLQVSI
Trigger: GATGGAAACCTGAAGTCTATCATGAGGCTGGTCCTTGCCTTGGCAGCTCATTTCAAACCTGGCTCCAGCAGGACGGTGAACCAAGGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5
CDS GCA 90 bp GAGCAGCTGGATTCAGACGGGGACCTTTGTTGCCCTTCGTACTGCTaGACTAGGGCCCGCACACTCCAGTATGGATTCTCAATTTCCTCA +
Preference number: 5 (lower is better)
Translates to: EQLDSDGDLCCPSYC*TRARTLQYGFSISS
Trigger: TGAGGAAATTGAGAATCCATACTGGAGTGTGCGGGCCCTAGTGCAGCAGTACGAAGGGCAACAAAGGTCCCCGTCTGAATCCAGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000529225.5
CDS-3UTR CAA 90 bp CCTTCCTACCCTCCTACTAGCACAAACCCACAAAGCACTGCTAAGGGGTATCCCATAGGCCTGCAGCTGTaGAGAAGGCTCTGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: PSYPPTSTNPQSTAKGYPIGLQL*RRLCWQ
Trigger: CTGCCAACAGAGCCTTCTCAACAGCTGCAGGCCTAT...GGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGCTAGTAGGAGGGTAGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS TCA 90 bp ATCCATGCTGCTGTTCCTCTGTCTATATCGAAAGACATCCCGTCCTaGTCGGGACATGTCATGACACACATCGGCCAGAGCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: IHAAVPLSISKDIPS*SGHVMTHIGQSSSC
Trigger: GCAGCTGCTGCTCTGGCCGATGTGTGTCATGACATGTCCCGATCAGGACGGGATGTCTTTCGATATAGACAGAGGAACAGCAGCATGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000529225.5
CDS CCA 90 bp TCCTCCAGAATTCAGGTTTCAGAGGCCACAGTTACCTGGAGCAGCTaGATTCAGACGGGGACCTTTGTTGCCCTTCGTACTGCTGCACTA +
Preference number: 5 (lower is better)
Translates to: SSRIQVSEATVTWSS*IQTGTFVALRTAAL
Trigger: TAGTGCAGCAGTACGAAGGGCAACAAAGGTCCCCGTCTGAATCCAGCTGCTCCAGGTAACTGTGGCCTCTGAAACCTGAATTCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS CCA 90 bp CTCCGAGAATCCTCCAGAATTCAGGTTTCAGAGGCCACAGTTACCTaGAGCAGCTGGATTCAGACGGGGACCTTTGTTGCCCTTCGTACT +
Preference number: 5 (lower is better)
Translates to: LRESSRIQVSEATVT*SSWIQTGTFVALRT
Trigger: AGTACGAAGGGCAACAAAGGTCCCCGTCTGAATCCAGCTGCTCCAGGTAACTGTGGCCTCTGAAACCTGAATTCTGGAGGATTCTCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS CCA 90 bp GCCTTCTCTTCTGACTGGGTTATAATGGACTCGCTCTTTGCACTGTaGATTGGACTGGGTGAAGTCAGGCTTCTCCACTCTGAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: AFSSDWVIMDSLFAL*IGLGEVRLLHSEPS
Trigger: GGAGGGCTCAGAGTGGAGAAGCCTGACTTCACCCAGTCCAATCCACAGTGCAAAGAGCGAGTCCATTATAACCCAGTCAGAAGAGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614104.4
CDS-3UTR CAA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCTCAGGCAGGCTAGCATaGTTCCTGCTGGGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVSGRLA*FLLGAP
Trigger: GGGAGCCCCCAGCAGGAACAATGCTAGCCTGCCTGA...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CAA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGATGCAGCTGTTGCTCATaGAAGCCCTCCTGCAGGACG +
Preference number: 5 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGCSCCS*KPSCRT
Trigger: CGTCCTGCAGGAGGGCTTCAATGAGCAACAGCTGCA...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CAA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACCCATCCCGGAGATCTaGTCGCAGGTCCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: RGDELETDRSRTQNRCVLPIPEI*SQVLHR
Trigger: CCTGTGCAGGACCTGCGACAAGATCTCCGGGATGGG...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CAA 90 bp ATCATAAACACTGGCACCTCATATGCAAATGTCAGAACCACTGGACTGGGCCCTTCTGGAGTCCCGTCCTaGGTTCACCGTCCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: IINTGTSYANVRTTGLGPSGVPS*VHRPAG
Trigger: TCCAGCAGGACGGTGAACCAAGGACGGGACTCCAGA...AGGGCCCAGTCCAGTGGTTCTGACATTTGCATATGAGGTGCCAGTGTTTATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CAA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTATGGCCACTGAAGCTGTaGCGCAGGCTGCGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVWPLKL*RRLRRA
Trigger: TGCTCTCCGCAGCCTGCGCAACAGCTTCAGTGGCCA...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS CCA 90 bp GCCTTCTCTTCTGACTGGGTTATAATGGACTCGCTCTTTGCACTGTaGATTGGACTGGGTGAAGTCAGGCATTTGACTTGCGTCCCTCCC +
Preference number: 5 (lower is better)
Translates to: AFSSDWVIMDSLFAL*IGLGEVRHLTCVPP
Trigger: GGGAGGGACGCAAGTCAAATGCCTGACTTCACCCAGTCCAATCCACAGTGCAAAGAGCGAGTCCATTATAACCCAGTCAGAAGAGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS-3UTR CAA 90 bp GCACAAACCCACAAAGCACTGCTAAGGGGTATCCCTTTAAAGCCAAACATAAACCCCATCCCGGAGATCTaGTCGCAGGTCCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: AQTHKALLRGIPLKPNINPIPEI*SQVLHR
Trigger: CCTGTGCAGGACCTGCGACAAGATCTCCGGGATGGG...GTTTATGTTTGGCTTTAAAGGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CAA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCAAGACGGGGACCTTTGTaGCCCTTCGTACTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSRRGPL*PFVLLH
Trigger: GTGCAGCAGTACGAAGGGCAACAAAGGTCCCCGTCT...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CAA 90 bp ATAAACACTGGCACCTCATATGCAAATGTCAGAACCACTGGACTGGGCCCTGACTTCAGACGGGGACCTTaGTTGCCCTTCGTACTGCTG +
Preference number: 5 (lower is better)
Translates to: INTGTSYANVRTTGLGPDFRRGP*LPFVLL
Trigger: CAGCAGTACGAAGGGCAACAAAGGTCCCCGTCTGAA...GTCAGGGCCCAGTCCAGTGGTTCTGACATTTGCATATGAGGTGCCAGTGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CAA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCAGTTGTTCCTCGGGATaGACACCTGGTTCACAGAGG +
Preference number: 5 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLSCSSG*TPGSQR
Trigger: CCTCTGTGAACCAGGTGTCAATCCCGAGGAACAACT...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp TATGCAAATGTCAGAACCACTGGACTGGGCCCTGACAGGTTCCAGCCATGCCCCCTGCACAGATTCCATTaGTGGGAAATAAACCAGCAC +
Preference number: 5 (lower is better)
Translates to: YANVRTTGLGPDRFQPCPLHRFH*WEINQH
Trigger: GTGCTGGTTTATTTCCCACAAATGGAATCTGTGCAG...GGGGCATGGCTGGAACCTGTCAGGGCCCAGTCCAGTGGTTCTGACATTTGCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS TCA 90 bp AGATTTCTACCCTTACCTCTGTCTATATCGAAAGACATCCCGTCCTaGTCGGGACATGTCATGACACACATCGGCCAGAGCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RFLPLPLSISKDIPS*SGHVMTHIGQSSSC
Trigger: GCAGCTGCTGCTCTGGCCGATGTGTGTCATGACATGTCCCGATCAGGACGGGATGTCTTTCGATATAGACAGAGGTAAGGGTAGAAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528399.1
CDS-3UTR CAA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCCTCCTTTTCCTGCCGTaGGAAGGAGAAAACCATTGC +
Preference number: 5 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLLLFLP*EGENHC
Trigger: GCAATGGTTTTCTCCTTCCAACGGCAGGAAAAGGAG...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGATCGCTGGTCCCTCTGTaGCTGACTGAAGTAGCTCCT +
Preference number: 5 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRSLVPL*LTEVAP
Trigger: AGGAGCTACTTCAGTCAGCAACAGAGGGACCAGCGA...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCAAGGCTCCTCTCGCTTaGGAAACTGGAATGAGGATC +
Preference number: 5 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLKAPLA*ETGMRI
Trigger: GATCCTCATTCCAGTTTCCAAAGCGAGAGGAGCCTT...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp CCTTCCTACCCTCCTACTAGCACAAACCCACAAAGCACTGCTAAGGGGTATCCCGCACTGTATCCTGTTTaGGTCTCTGTACTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: PSYPPTSTNPQSTAKGYPALYPV*VSVLGS
Trigger: AGAGCCAAGTACAGAGACCAAAACAGGATACAGTGC...GGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGCTAGTAGGAGGGTAGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CAA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTAAGTCAGGCATTTGACTaGCGTCCCTCCCATGGTCCC +
Preference number: 5 (lower is better)
Translates to: RGDELETDRSRTQNRCVLSQAFD*RPSHGP
Trigger: GGGACCATGGGAGGGACGCAAGTCAAATGCCTGACT...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS-3UTR CAA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTATTCAGACGGGGACCTTaGTTGCCCTTCGTACTGCTG +
Preference number: 5 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVFRRGP*LPFVLL
Trigger: CAGCAGTACGAAGGGCAACAAAGGTCCCCGTCTGAA...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CAA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCAAGTTGTTCCTCGGGATaGACACCTGGTTCACAGAGG +
Preference number: 5 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSSCSSG*TPGSQR
Trigger: CCTCTGTGAACCAGGTGTCAATCCCGAGGAACAACT...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS TCA 90 bp CACCTCCTCCAACCTCTTTGGTATATTGACCATGAAGGGCGTAAGTaGCCGGTCAGTGAAATAGAGCACTTTAGTACAGGTGCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: HLLQPLWYIDHEGRK*PVSEIEHFSTGAAD
Trigger: GTCAGCAGCACCTGTACTAAAGTGCTCTATTTCACTGACCGGTCACTTACGCCCTTCATGGTCAATATACCAAAGAGGTTGGAGGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440460.7
ENST00000526500.5
ENST00000615255.1
ENST00000618522.4
CDS-3UTR CAA 90 bp AGTAGAATAGAACACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGGCCAAGAGGACATCTTaGTGTTCTAGCTCTCGCTCT +
Preference number: 5 (lower is better)
Translates to: SRIEHCVPTDKELQMNPWAKRTS*CSSSRS
Trigger: AGAGCGAGAGCTAGAACACAAAGATGTCCTCTTGGC...CCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTGTTCTATTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS TCA 90 bp AACTTTGAGTTAGGGGGCCAGGACTCCCGGTATTCACTACCTACTTaGGTTCTGGGTGACTTGACCCGAACCTTTCTTTCTTGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: NFELGGQDSRYSLPT*VLGDLTRTFLSCFF
Trigger: GAAGAAACAAGAAAGAAAGGTTCGGGTCAAGTCACCCAGAACTCAAGTAGGTAGTGAATACCGGGAGTCCTGGCCCCCTAACTCAAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000440460.7
ENST00000526500.5
ENST00000615255.1
ENST00000618522.4
CDS TCA 90 bp TTACTTGAGTTAGGGGGCCAGGACTCCCGGTATTCACTACCTACTTaGGTTCTGGGTGACTTGACCCGAACCTTTCTTTCTTGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LLELGGQDSRYSLPT*VLGDLTRTFLSCFF
Trigger: GAAGAAACAAGAAAGAAAGGTTCGGGTCAAGTCACCCAGAACTCAAGTAGGTAGTGAATACCGGGAGTCCTGGCCCCCTAACTCAAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530645.1
CDS-3UTR CAA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCATCAGGTAAGGATCCATaGAGCAGTAAGGCCTGTAGT +
Preference number: 5 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSSGKDP*SSKACS
Trigger: ACTACAGGCCTTACTGCTCAATGGATCCTTACCTGA...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp TCAGTCTTGCATACTTCTGCTCAGAAGGCTCCTCTCGCTTTGGAAACTGGAATGAGATCCACATTCTGGTaGTGCAGCTCATCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: SVLHTSAQKAPLALETGMRSTFW*CSSSLS
Trigger: GGACAAAGATGAGCTGCACAACCAGAATGTGGATCT...CATTCCAGTTTCCAAAGCGAGAGGAGCCTTCTGAGCAGAAGTATGCAAGACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTCTCCTTTTCCTGCCGTaGGAAGGAGAAAACCATTGC +
Preference number: 5 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCLLFLP*EGENHC
Trigger: GCAATGGTTTTCTCCTTCCAACGGCAGGAAAAGGAG...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTAGCTGGTACCTTTGCCTaGTCTGTGAGTACAAACGCT +
Preference number: 5 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVAGTFA*SVSTNA
Trigger: AGCGTTTGTACTCACAGACAAGGCAAAGGTACCAGC...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTAGCCCCATGGTTTCTATaGTGCCCTAAAAGATCAGCC +
Preference number: 5 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVAPWFL*CPKRSA
Trigger: GGCTGATCTTTTAGGGCACAATAGAAACCATGGGGC...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCCCAAAGAGTAGTTTGTaGAAATGGCTGAAAAGGGGA +
Preference number: 5 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLPKSSL*KWLKRG
Trigger: TCCCCTTTTCAGCCATTTCAACAAACTACTCTTTGG...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGAGACATCAAGTATCTTTaGAGCTCCTTCTCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGDIKYL*SSFSLP
Trigger: TGGCAGAGAGAAGGAGCTCAAAAGATACTTGATGTC...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS TCA 90 bp TCTAATATGCTAGGAGTCCCTACTGAGCAAAAATGGGTACTTACTTaGGTTAGGGGGCCAGGACTCCCGGTATTCACTACCTACTTGAGT +
Preference number: 5 (lower is better)
Translates to: SNMLGVPTEQKWVLT*VRGPGLPVFTTYLS
Trigger: ACTCAAGTAGGTAGTGAATACCGGGAGTCCTGGCCCCCTAACTCAAGTAAGTACCCATTTTTGCTCAGTAGGGACTCCTAGCATATTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530645.1
CDS-3UTR CAA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTTCTGGAGTCCCGTCCTaGGTTCACCGTCCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: ENPGYQIISVVELLASSLSGVPS*VHRPAG
Trigger: TCCAGCAGGACGGTGAACCAAGGACGGGACTCCAGA...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CAA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGAGCCAAGAGGACATCTTaGTGTTCTAGCTCTCGCTCT +
Preference number: 5 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGAKRTS*CSSSRS
Trigger: AGAGCGAGAGCTAGAACACAAAGATGTCCTCTTGGC...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGAAACCTCTTTGGTATATaGACCATGAAGGGCGTAAGT +
Preference number: 5 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGNLFGI*TMKGVS
Trigger: ACTTACGCCCTTCATGGTCAATATACCAAAGAGGTT...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCACCCATGGTCTACATTaGGACAGAATTTTAAGTACC +
Preference number: 5 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLTHGLH*DRILST
Trigger: GGTACTTAAAATTCTGTCCAAATGTAGACCATGGGT...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGAAAGGCTCCTCTCGCTTaGGAAACTGGAATGAGGATC +
Preference number: 5 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGKAPLA*ETGMRI
Trigger: GATCCTCATTCCAGTTTCCAAAGCGAGAGGAGCCTT...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGACAAACAGAATCAGTCTaGCATACTTCTGCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGQTESV*HTSAQK
Trigger: CTTCTGAGCAGAAGTATGCAAGACTGATTCTGTTTG...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS GCA 90 bp ATCATGGAAAATCTCCTCTTTGACAGTGCCAAACTCAGGATCCAGTaGTTTGAAGTGATACCGGTGATTTCCTTCCCGATCAATAGCTGC +
Preference number: 5 (lower is better)
Translates to: IMENLLFDSAKLRIQ*FEVIPVISFPINSC
Trigger: GCAGCTATTGATCGGGAAGGAAATCACCGGTATCACTTCAAAGCACTGGATCCTGAGTTTGGCACTGTCAAAGAGGAGATTTTCCATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000440460.7
ENST00000526418.1
ENST00000526500.5
ENST00000615255.1
ENST00000618522.4
CDS-3UTR CAA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGATCAGGTAAGGATCCATaGAGCAGTAAGGCCTGTAGT +
Preference number: 5 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGSGKDP*SSKACS
Trigger: ACTACAGGCCTTACTGCTCAATGGATCCTTACCTGA...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp CACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGTCTACATTTGGACTGATCCAGACGACTTaGGATTATAATCAGTTGTTC +
Preference number: 5 (lower is better)
Translates to: HCVPTDKELQMNPWSTFGLIQTT*DYNQLF
Trigger: GAACAACTGATTATAATCCAAAGTCGTCTGGATCAG...TCCAAATGTAGACCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp GATATGGGTAGCAGCACCTTTCCATACCCGCCTGGATTTTCAAGGAGCTTTTCACATCTTTGTCCATATTaGCCCTCAGTAGCTCTTGTT +
Preference number: 5 (lower is better)
Translates to: DMGSSTFPYPPGFSRSFSHLCPY*PSVALV
Trigger: AACAAGAGCTACTGAGGGCAAATATGGACAAAGATG...TGAAAAGCTCCTTGAAAATCCAGGCGGGTATGGAAAGGTGCTGCTACCCATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGAAGATCCACATTCTGGTaGTGCAGCTCATCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGRSTFW*CSSSLS
Trigger: GGACAAAGATGAGCTGCACAACCAGAATGTGGATCT...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTGCCCCATGGTTTCTATaGTGCCCTAAAAGATCAGCC +
Preference number: 5 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPAPWFL*CPKRSA
Trigger: GGCTGATCTTTTAGGGCACAATAGAAACCATGGGGC...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGAGTCCTACTCTTGTGTTaGGCAGTGTACATTGGAGGT +
Preference number: 5 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGVLLLC*AVYIGG
Trigger: ACCTCCAATGTACACTGCCAAACACAAGAGTAGGAC...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp TACCCCACACCAATGCCACCAGGCGACAATACTATGAATAAGTCAGGAGGCCTCCTAAAACAGGTAGAATaGGAACAGGAATTAGTTGTC +
Preference number: 5 (lower is better)
Translates to: YPTPMPPGDNTMNKSGGLLKQVE*EQELVV
Trigger: GACAACTAATTCCTGTTCCAATTCTACCTGTTTTAG...GAGGCCTCCTGACTTATTCATAGTATTGTCGCCTGGTGGCATTGGTGTGGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCGACATCAAGTATCTTTaGAGCTCCTTCTCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVDIKYL*SSFSLP
Trigger: TGGCAGAGAGAAGGAGCTCAAAAGATACTTGATGTC...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp ACTAGCACAAACCCACAAAGCACTGCTAAGGGGTATCCCTTTAAAGCCAAACATGAATCTCATAACCACTaGGGTCCCCATCTTCAAGAG +
Preference number: 5 (lower is better)
Translates to: TSTNPQSTAKGYPFKAKHESHNH*GPHLQE
Trigger: CTCTTGAAGATGGGGACCCAAGTGGTTATGAGATTC...ATGTTTGGCTTTAAAGGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS TCA 90 bp CTCTATTCCTTCAGCGGGAATAATCACAAAATCTGCCTTCTCTTCTaGCTGGGTTATAATGGACTCGCTCTTTGCACTGTGGATTGGACT +
Preference number: 5 (lower is better)
Translates to: LYSFSGNNHKICLLF*LGYNGLALCTVDWT
Trigger: AGTCCAATCCACAGTGCAAAGAGCGAGTCCATTATAACCCAGTCAGAAGAGAAGGCAGATTTTGTGATTATTCCCGCTGAAGGAATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000614104.4
ENST00000615255.1
CDS-3UTR CAA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTTTGGATTATAATCAGTaGTTCCTCGGGATTGACACC +
Preference number: 5 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCLDYNQ*FLGIDT
Trigger: GGTGTCAATCCCGAGGAACAACTGATTATAATCCAA...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTATTGGATTATAATCAGTaGTTCCTCGGGATTGACACC +
Preference number: 5 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVLDYNQ*FLGIDT
Trigger: GGTGTCAATCCCGAGGAACAACTGATTATAATCCAA...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTCATCTTTGTCCATATTaGCCCTCAGTAGCTCTTGTT +
Preference number: 5 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCHLCPY*PSVALV
Trigger: AACAAGAGCTACTGAGGGCAAATATGGACAAAGATG...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp AGTAGAATAGAACACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGGAGAAAACCATTGCTTaGAGAGTTGTGACTGTTGTA +
Preference number: 5 (lower is better)
Translates to: SRIEHCVPTDKELQMNPWEKTIA*RVVTVV
Trigger: TACAACAGTCACAACTCTCAAAGCAATGGTTTTCTC...CCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTGTTCTATTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp CTTGTGTTTGGCAGTGTACATTGGAGGTCACAGGCAGATAGACTGCTTTTGGTAAACCTCTTTGGTATATaGACCATGAAGGGCGTAAGT +
Preference number: 5 (lower is better)
Translates to: LVFGSVHWRSQADRLLLVNLFGI*TMKGVS
Trigger: ACTTACGCCCTTCATGGTCAATATACCAAAGAGGTT...TACCAAAAGCAGTCTATCTGCCTGTGACCTCCAATGTACACTGCCAAACACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCGGAGAAGCTTCTGTTTaGGCACACAAACTAGAAACT +
Preference number: 5 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVGEASV*AHKLET
Trigger: AGTTTCTAGTTTGTGTGCCAAAACAGAAGCTTCTCC...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp AGTAGAATAGAACACTGTGTTCCCACGGACAAGGAACTCCAGATGAACCCATGGCCTCATGAGTTATTCTaGGTTTGCAGTAGGTTCAAA +
Preference number: 5 (lower is better)
Translates to: SRIEHCVPTDKELQMNPWPHELF*VCSRFK
Trigger: TTTGAACCTACTGCAAACCAAGAATAACTCATGAGG...CCATGGGTTCATCTGGAGTTCCTTGTCCGTGGGAACACAGTGTTCTATTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp CAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTCCAAAGAGTAGTTTGTaGAAATGGCTGAAAAGGGGA +
Preference number: 5 (lower is better)
Translates to: QIGQEPRTDVSYSCVWQCPKSSL*KWLKRG
Trigger: TCCCCTTTTCAGCCATTTCAACAAACTACTCTTTGG...ACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGACCTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTGGTGAAGTCAGGCATTaGACTTGCGTCCCTCCCATG +
Preference number: 5 (lower is better)
Translates to: ENPGYQIISVVELLASSLGEVRH*TCVPPM
Trigger: CATGGGAGGGACGCAAGTCAAATGCCTGACTTCACC...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS-3UTR CAA 90 bp AGGGGAGATGAATTGGAGACAGATAGGTCAAGAACCCAGAACAGATGTGTCCTACTGATCCAGACGACTTaGGATTATAATCAGTTGTTC +
Preference number: 5 (lower is better)
Translates to: RGDELETDRSRTQNRCVLLIQTT*DYNQLF
Trigger: GAACAACTGATTATAATCCAAAGTCGTCTGGATCAG...TAGGACACATCTGTTCTGGGTTCTTGACCTATCTGTCTCCAATTCATCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp AGGAGGCCTCCTAGAATGCAGCCAAATAGGAAACTGTTCCAAACAGAATCAGTCGAGAAAACCATTGCTTaGAGAGTTGTGACTGTTGTA +
Preference number: 5 (lower is better)
Translates to: RRPPRMQPNRKLFQTESVEKTIA*RVVTVV
Trigger: TACAACAGTCACAACTCTCAAAGCAATGGTTTTCTC...GACTGATTCTGTTTGGAACAGTTTCCTATTTGGCTGCATTCTAGGAGGCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGAGGAGAAGCTTCTGTTTaGGCACACAAACTAGAAACT +
Preference number: 5 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGGEASV*AHKLET
Trigger: AGTTTCTAGTTTGTGTGCCAAAACAGAAGCTTCTCC...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGACTAAAACAGGTAGAATaGGAACAGGAATTAGTTGTC +
Preference number: 5 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRLKQVE*EQELVV
Trigger: GACAACTAATTCCTGTTCCAATTCTACCTGTTTTAG...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp TCAAGAACCCAGAACAGATGTGTCCTACTCTTGTGTTTGGCAGTGTACATTGGACAAACAGAATCAGTCTaGCATACTTCTGCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: SRTQNRCVLLLCLAVYIGQTESV*HTSAQK
Trigger: CTTCTGAGCAGAAGTATGCAAGACTGATTCTGTTTG...TCCAATGTACACTGCCAAACACAAGAGTAGGACACATCTGTTCTGGGTTCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp TGCCATTCACAACTCATGCTCCACGCCCCATGGTTTCTATTGTGCCCTAAAAGAGATATTTTCCCTAATTaGCAACCATCCTGGTCAAAA +
Preference number: 5 (lower is better)
Translates to: CHSQLMLHAPWFLLCPKRDIFPN*QPSWSK
Trigger: TTTTGACCAGGATGGTTGCAAATTAGGGAAAATATC...TCTTTTAGGGCACAATAGAAACCATGGGGCGTGGAGCATGAGTTGTGAATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CAA 90 bp CTAATTTGCAACCATCCTGGTCAAAAAGAGCTGAAAAGTTGGTCAGTAAGTAGAGTCCTACTCTTGTGTTaGGCAGTGTACATTGGAGGT +
Preference number: 5 (lower is better)
Translates to: LICNHPGQKELKSWSVSRVLLLC*AVYIGG
Trigger: ACCTCCAATGTACACTGCCAAACACAAGAGTAGGAC...TCTACTTACTGACCAACTTTTCAGCTCTTTTTGACCAGGATGGTTGCAAATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CAA 90 bp GTTCCTGTAGAGGAAAGTTGGAAACATTCTAATGCTCTAAGACAACTCTGCTCAGGCAGCAAGGAGTTATaGAATCTCATAACCACTTGG +
Preference number: 5 (lower is better)
Translates to: VPVEESWKHSNALRQLCSGSKEL*NLITTW
Trigger: CCAAGTGGTTATGAGATTCAATAACTCCTTGCTGCC...TGAGCAGAGTTGTCTTAGAGCATTAGAATGTTTCCAACTTTCCTCTACAGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS GCA 90 bp CCCTGTAAGTTTCTGGCTTCTTGTTTACATTTCAGCAGTTCCTTCTaGAAACCAAATATAGTTAGATCAGATGGTGACATCTGGGTTGCT +
Preference number: 5 (lower is better)
Translates to: PCKFLASCLHFSSSF*KPNIVRSDGDIWVA
Trigger: AGCAACCCAGATGTCACCATCTGATCTAACTATATTTGGTTTGCAGAAGGAACTGCTGAAATGTAAACAAGAAGCCAGAAACTTACAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526500.5
CDS-3UTR CAA 90 bp CTAATTTGCAACCATCCTGGTCAAAAAGAGCTGAAAAGTTGGTCAGTAAGTAGATTGTGCAGCTCATCTTaGTCCATATTTGCCCTCAGT +
Preference number: 5 (lower is better)
Translates to: LICNHPGQKELKSWSVSRLCSSS*SIFALS
Trigger: ACTGAGGGCAAATATGGACAAAGATGAGCTGCACAA...TCTACTTACTGACCAACTTTTCAGCTCTTTTTGACCAGGATGGTTGCAAATTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS-3UTR CAA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTACCCATGGTCTACATTaGGACAGAATTTTAAGTACC +
Preference number: 5 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPTHGLH*DRILST
Trigger: GGTACTTAAAATTCTGTCCAAATGTAGACCATGGGT...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp TACACAGGAGTTATGAGAGTTACATCCTCTAGCAGAGATGCTTGGTCATTACCTCCTCATGAGTTATTCTaGGTTTGCAGTAGGTTCAAA +
Preference number: 5 (lower is better)
Translates to: YTGVMRVTSSSRDAWSLPPHELF*VCSRFK
Trigger: TTTGAACCTACTGCAAACCAAGAATAACTCATGAGG...AGGTAATGACCAAGCATCTCTGCTAGAGGATGTAACTCTCATAACTCCTGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS-3UTR CAA 90 bp CTAGCACAAACCCACAAAGCACTGCTAAGGGGTATCCCTTTAAAGCCAAACATATTTTTGCTTGTTGTATaGTTACTTGAAGCCGAGAAC +
Preference number: 5 (lower is better)
Translates to: LAQTHKALLRGIPLKPNIFLLVV*LLEAEN
Trigger: GTTCTCGGCTTCAAGTAACAATACAACAAGCAAAAA...TATGTTTGGCTTTAAAGGGATACCCCTTAGCAGTGCTTTGTGGGTTTGTGCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CAA 90 bp TTTTGCTTGTTGTATTGTTACTTGAAGCCGAGAACTCCGAGAATCCTCCAGAATTTTTGGTCTCTGTACTaGGCTCTAAAGGATACACAC +
Preference number: 5 (lower is better)
Translates to: FCLLYCYLKPRTPRILQNFWSLY*ALKDTH
Trigger: GTGTGTATCCTTTAGAGCCAAGTACAGAGACCAAAA...ATTCTGGAGGATTCTCGGAGTTCTCGGCTTCAAGTAACAATACAACAAGCAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS-3UTR CAA 90 bp GAAAACCCAGGTTATCAAATAATCTCGGTAGTTGAACTGTTAGCTTCTTCACTTTTGTGCAGCTCATCTTaGTCCATATTTGCCCTCAGT +
Preference number: 5 (lower is better)
Translates to: ENPGYQIISVVELLASSLLCSSS*SIFALS
Trigger: ACTGAGGGCAAATATGGACAAAGATGAGCTGCACAA...AAGTGAAGAAGCTAACAGTTCAACTACCGAGATTATTTGATAACCTGGGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000615255.1
CDS CCA 72 bp CGACTCCAGCCAGCCAGAGCCAGCCCCTGCCGGCCTTaGTCCCGCCTCTGGCCCGCCGGATCCCGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: RLQPARASPCRP*SRLWPAGSRLL
Trigger: CAGGAGGCGGGATCCGGCGGGCCAGAGGCGGGACCAAGGCCGGCAGGGGCTGGCTCTGGCTGGCTGGAGTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS CCA 72 bp GGCGGAAGCTGCCTCCCCTCGCAGGCTGCCGGCCCCTaGCCGCTGCATCTTGGCCTCCGCGGACGCACGGTG +
Preference number: 6 (lower is better)
Translates to: GGSCLPSQAAGP*PLHLGLRGRTV
Trigger: CACCGTGCGTCCGCGGAGGCCAAGATGCAGCGGCCAGGGGCCGGCAGCCTGCGAGGGGAGGCAGCTTCCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS CCA 72 bp GAACGGCGGCGGCGGCGGCGTCTCGGCCCCAGCGACTaGGATGCTCCAGGCTCTGAAGCGCGCAGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: ERRRRRRLGPSD*DAPGSEARSPG
Trigger: GCCGGGACTGCGCGCTTCAGAGCCTGGAGCATCCCAGTCGCTGGGGCCGAGACGCCGCCGCCGCCGCCGTTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS TCA 72 bp GTGCTCTGGCTTTGCCGCGGTTTCCCGCTGCCATGGTaGTGCGGGGGCCGGCCACAAGCCCCGCCCGACTCC +
Preference number: 6 (lower is better)
Translates to: VLWLCRGFPLPW*CGGRPQAPPDS
Trigger: GGAGTCGGGCGGGGCTTGTGGCCGGCCCCCGCATCACCATGGCAGCGGGAAACCGCGGCAAAGCCAGAGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS GCA 72 bp GCCTGCCAGTGCTCTGGCTTTGCCGCGGTTTCCCGCTaGCATGGTGATGCGGGGGCCGGCCACAAGCCCCGC +
Preference number: 6 (lower is better)
Translates to: ACQCSGFAAVSR*HGDAGAGHKPR
Trigger: GCGGGGCTTGTGGCCGGCCCCCGCATCACCATGGCAGCGGGAAACCGCGGCAAAGCCAGAGCACTGGCAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS TCA 72 bp GCGTCTCGGCCCCAGCGACTGGGATGCTCCAGGCTCTaGAGCGCGCAGTCCCGGCCGCTCAGACTGTGCAGC +
Preference number: 6 (lower is better)
Translates to: ASRPQRLGCSRL*SAQSRPLRLCS
Trigger: GCTGCACAGTCTGAGCGGCCGGGACTGCGCGCTTCAGAGCCTGGAGCATCCCAGTCGCTGGGGCCGAGACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS GCA 72 bp TCTCTGTCCCCAGCCCTCCTGAGCTCGGCCTGCCAGTaGTCTGGCTTTGCCGCGGTTTCCCGCTGCCATGGT +
Preference number: 6 (lower is better)
Translates to: SLSPALLSSACQ*SGFAAVSRCHG
Trigger: ACCATGGCAGCGGGAAACCGCGGCAAAGCCAGAGCACTGGCAGGCCGAGCTCAGGAGGGCTGGGGACAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS CCA 72 bp CGGCCAGAGCAGCAGCTGCTCCCTGGGCAACAGCAGTaGCACAGTGTGGTCGGTGACTTTGCAGAGGGGCTC +
Preference number: 6 (lower is better)
Translates to: RPEQQLLPGQQQ*HSVVGDFAEGL
Trigger: GAGCCCCTCTGCAAAGTCACCGACCACACTGTGCCACTGCTGTTGCCCAGGGAGCAGCTGCTGCTCTGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5
CDS CAA 72 bp TGGGTGAAGTCAGGCTTCTCCACTCTGAGCCCTCCCTaGGTGGACGAGGGGTCGGTCGGACAGGTCAGGCCC +
Preference number: 6 (lower is better)
Translates to: WVKSGFSTLSPP*VDEGSVGQVRP
Trigger: GGGCCTGACCTGTCCGACCGACCCCTCGTCCACCAAGGGAGGGCTCAGAGTGGAGAAGCCTGACTTCACCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614104.4
CDS CAA 90 bp AGCTGCTCCCTGGGCAACAGCAGTGGCACAGTGTGGTCGGTGACTTaGCAGAGGGGCTCTGGAGTCCCGTCCTTGGTTCACCGTCCTGCT +
Preference number: 6 (lower is better)
Translates to: SCSLGNSSGTVWSVT*QRGSGVPSLVHRPA
Trigger: AGCAGGACGGTGAACCAAGGACGGGACTCCAGAGCCCCTCTGCAAAGTCACCGACCACACTGTGCCACTGCTGTTGCCCAGGGAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5
CDS CCA 72 bp TGGCACAGTGTGGTCGGTGACTTTGCAGAGGGGCTCTaGAGTCCCGTCCTTGGTTCACCGTCCTGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: WHSVVGDFAEGL*SPVLGSPSCWS
Trigger: GCTCCAGCAGGACGGTGAACCAAGGACGGGACTCCAGAGCCCCTCTGCAAAGTCACCGACCACACTGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5
CDS CCA 72 bp CACATCGCTCCCAAATTCAGGCATGTCTCCCCGCGCTaGGGCTGGAAAACGCCTCCACGGGAAGGCCAGCTA +
Preference number: 6 (lower is better)
Translates to: HIAPKFRHVSPR*GWKTPPREGQL
Trigger: TAGCTGGCCTTCCCGTGGAGGCGTTTTCCAGCCCCAGCGCGGGGAGACATGCCTGAATTTGGGAGCGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS TCA 72 bp TCCTGTCTCGGGCTTCAGCAAGCCTGCGTCCCCGGGTaGAGTGGGAGGCTGAGAGTCACATCGCTCCCAAAT +
Preference number: 6 (lower is better)
Translates to: SCLGLQQACVPG*SGRLRVTSLPN
Trigger: ATTTGGGAGCGATGTGACTCTCAGCCTCCCACTTCACCCGGGGACGCAGGCTTGCTGAAGCCCGAGACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS CCA 72 bp CTCCCTCTGCACACAAAGGCTCTCGGCTCAGCTCATTaGGATCCCTCCGGAGTCCCGCATGCCACTTACTGG +
Preference number: 6 (lower is better)
Translates to: LPLHTKALGSAH*DPSGVPHATYW
Trigger: CCAGTAAGTGGCATGCGGGACTCCGGAGGGATCCCAATGAGCTGAGCCGAGAGCCTTTGTGTGCAGAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS CCA 72 bp TCTCGGGCTTCAGCAAGCCTGCGTCCCCGGGTGAAGTaGGAGGCTGAGAGTCACATCGCTCCCAAATTCAGG +
Preference number: 6 (lower is better)
Translates to: SRASASLRPRVK*EAESHIAPKFR
Trigger: CCTGAATTTGGGAGCGATGTGACTCTCAGCCTCCCACTTCACCCGGGGACGCAGGCTTGCTGAAGCCCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS CAA 72 bp CCTCCCTCTGCACACAAAGGCTCTCGGCTCAGCTCATaGGGATCCCTCCGGAGTCCCGCATGCCACTTACTG +
Preference number: 6 (lower is better)
Translates to: PPSAHKGSRLSS*GSLRSPACHLL
Trigger: CAGTAAGTGGCATGCGGGACTCCGGAGGGATCCCAATGAGCTGAGCCGAGAGCCTTTGTGTGCAGAGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440460.7
CDS GCA 72 bp CCGGAGATCTTGTCGCAGGTCCTGCACAGGCTTCACTaGTGGCCTCTTCTTCAGCTGTGCATTCACCCAGGC +
Preference number: 6 (lower is better)
Translates to: PEILSQVLHRLH*WPLLQLCIHPG
Trigger: GCCTGGGTGAATGCACAGCTGAAGAAGAGGCCAGCAGTGAAGCCTGTGCAGGACCTGCGACAAGATCTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5
CDS CAA 90 bp ACAGTGTGGTCGGTGACTTTGCAGAGGGGCTCTGGAGTCCCGTCCTaGGTTCACCGTCCTGCTGGAGCCAGGTTTGAAATGAGCTGCCAA +
Preference number: 6 (lower is better)
Translates to: TVWSVTLQRGSGVPS*VHRPAGARFEMSCQ
Trigger: TTGGCAGCTCATTTCAAACCTGGCTCCAGCAGGACGGTGAACCAAGGACGGGACTCCAGAGCCCCTCTGCAAAGTCACCGACCACACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5
CDS GCA 72 bp CTGCACAGGCTTCACTGCTGGCCTCTTCTTCAGCTGTaGATTCACCCAGGCCACATAGGCCTGCAGCTGTTG +
Preference number: 6 (lower is better)
Translates to: LHRLHCWPLLQL*IHPGHIGLQLL
Trigger: CAACAGCTGCAGGCCTATGTGGCCTGGGTGAATGCACAGCTGAAGAAGAGGCCAGCAGTGAAGCCTGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5
CDS GCA 72 bp CTGTTGCGCAGGCTGCGGAGAGCATCTCGAACAAGCTaGAGGTCGCTGGTCCCTCTGTTGCTGACTGAAGTA +
Preference number: 6 (lower is better)
Translates to: LLRRLRRASRTS*RSLVPLLLTEV
Trigger: TACTTCAGTCAGCAACAGAGGGACCAGCGACCTGCAGCTTGTTCGAGATGCTCTCCGCAGCCTGCGCAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000440460.7
ENST00000526500.5
ENST00000530645.1
ENST00000615255.1
ENST00000618522.4
CDS CAA 72 bp GATGAGATATGCCAGGATCACCCCATCCCGGAGATCTaGTCGCAGGTCCTGCACAGGCTTCACTGCTGGCCT +
Preference number: 6 (lower is better)
Translates to: DEICQDHPIPEI*SQVLHRLHCWP
Trigger: AGGCCAGCAGTGAAGCCTGTGCAGGACCTGCGACAAGATCTCCGGGATGGGGTGATCCTGGCATATCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5
CDS CAA 72 bp TCGGTGACTTTGCAGAGGGGCTCTGGAGTCCCGTCCTaGGTTCACCGTCCTGCTGGAGCCAGGTTTGAAATG +
Preference number: 6 (lower is better)
Translates to: SVTLQRGSGVPS*VHRPAGARFEM
Trigger: CATTTCAAACCTGGCTCCAGCAGGACGGTGAACCAAGGACGGGACTCCAGAGCCCCTCTGCAAAGTCACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5
CDS TCA 72 bp TATCGAAAGACATCCCGTCCTGATCGGGACATGTCATaGCACACATCGGCCAGAGCAGCAGCTGCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: YRKTSRPDRDMS*HTSARAAAAPW
Trigger: CCAGGGAGCAGCTGCTGCTCTGGCCGATGTGTGTCATGACATGTCCCGATCAGGACGGGATGTCTTTCGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5
CDS TCA 72 bp GAAATGCCCTGCTCCAAGCTGTCAATAGTGTGGTGCTaGGGATCGTGGCCACTGAAGCTGTTGCGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: EMPCSKLSIVWC*GSWPLKLLRRL
Trigger: CAGCCTGCGCAACAGCTTCAGTGGCCACGATCCTCAGCACCACACTATTGACAGCTTGGAGCAGGGCATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000440460.7
ENST00000526500.5
ENST00000530645.1
ENST00000615255.1
ENST00000618522.4
CDS GCA 72 bp CTGGATTCAGACGGGGACCTTTGTTGCCCTTCGTACTaGTGCACTAGGGCCCGCACACTCCAGTATGGATTC +
Preference number: 6 (lower is better)
Translates to: LDSDGDLCCPSY*CTRARTLQYGF
Trigger: GAATCCATACTGGAGTGTGCGGGCCCTAGTGCAGCAGTACGAAGGGCAACAAAGGTCCCCGTCTGAATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000529225.5
CDS TCA 72 bp CCTTGGTTCACCGTCCTGCTGGAGCCAGGTTTGAAATaGGCTGCCAAGGCAAGGACCAGCCTCATGATAGAC +
Preference number: 6 (lower is better)
Translates to: PWFTVLLEPGLK*AAKARTSLMID
Trigger: GTCTATCATGAGGCTGGTCCTTGCCTTGGCAGCTCATTTCAAACCTGGCTCCAGCAGGACGGTGAACCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5
CDS GCA 72 bp GATTCAGACGGGGACCTTTGTTGCCCTTCGTACTGCTaGACTAGGGCCCGCACACTCCAGTATGGATTCTCA +
Preference number: 6 (lower is better)
Translates to: DSDGDLCCPSYC*TRARTLQYGFS
Trigger: TGAGAATCCATACTGGAGTGTGCGGGCCCTAGTGCAGCAGTACGAAGGGCAACAAAGGTCCCCGTCTGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000529225.5
CDS CAA 90 bp AACAATCTCGATGAGATATGCCAGGATCACCCCATCCCGGAGATCTaGTCGCAGGTCCTGCACAGGCTTCACTGCTGGCCTCTTCTTCAG +
Preference number: 6 (lower is better)
Translates to: NNLDEICQDHPIPEI*SQVLHRLHCWPLLQ
Trigger: CTGAAGAAGAGGCCAGCAGTGAAGCCTGTGCAGGACCTGCGACAAGATCTCCGGGATGGGGTGATCCTGGCATATCTCATCGAGATTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5
CDS CCA 72 bp TCCTCCAGAATTCAGGTTTCAGAGGCCACAGTTACCTaGAGCAGCTGGATTCAGACGGGGACCTTTGTTGCC +
Preference number: 6 (lower is better)
Translates to: SSRIQVSEATVT*SSWIQTGTFVA
Trigger: GGCAACAAAGGTCCCCGTCTGAATCCAGCTGCTCCAGGTAACTGTGGCCTCTGAAACCTGAATTCTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS TCA 72 bp GCTGTTCCTCTGTCTATATCGAAAGACATCCCGTCCTaGTCGGGACATGTCATGACACACATCGGCCAGAGC +
Preference number: 6 (lower is better)
Translates to: AVPLSISKDIPS*SGHVMTHIGQS
Trigger: GCTCTGGCCGATGTGTGTCATGACATGTCCCGATCAGGACGGGATGTCTTTCGATATAGACAGAGGAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440460.7
ENST00000529225.5
CDS TCA 72 bp AACAAGCTGCAGGTCGCTGGTCCCTCTGTTGCTGACTaGAGTAGCTCCTTTTCCTGCCGTTGGAAGGAGAAA +
Preference number: 6 (lower is better)
Translates to: NKLQVAGPSVAD*SSSFSCRWKEK
Trigger: TTTCTCCTTCCAACGGCAGGAAAAGGAGCTACTTCAGTCAGCAACAGAGGGACCAGCGACCTGCAGCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000440460.7
ENST00000526500.5
ENST00000530645.1
ENST00000615255.1
ENST00000618522.4
CDS TCA 72 bp CCCTTACCTCTGTCTATATCGAAAGACATCCCGTCCTaGTCGGGACATGTCATGACACACATCGGCCAGAGC +
Preference number: 6 (lower is better)
Translates to: PLPLSISKDIPS*SGHVMTHIGQS
Trigger: GCTCTGGCCGATGTGTGTCATGACATGTCCCGATCAGGACGGGATGTCTTTCGATATAGACAGAGGTAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528399.1
CDS TCA 72 bp CTAGGAGTCCCTACTGAGCAAAAATGGGTACTTACTTaGGTTAGGGGGCCAGGACTCCCGGTATTCACTACC +
Preference number: 6 (lower is better)
Translates to: LGVPTEQKWVLT*VRGPGLPVFTT
Trigger: GGTAGTGAATACCGGGAGTCCTGGCCCCCTAACTCAAGTAAGTACCCATTTTTGCTCAGTAGGGACTCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530645.1
CDS GCA 72 bp ACTCAGCTTTTCTCCTGCAACAATCTCGATGAGATATaGCAGGATCACCCCATCCCGGAGATCTTGTCGCAG +
Preference number: 6 (lower is better)
Translates to: TQLFSCNNLDEI*QDHPIPEILSQ
Trigger: CTGCGACAAGATCTCCGGGATGGGGTGATCCTGGCATATCTCATCGAGATTGTTGCAGGAGAAAAGCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5
CDS CAA 72 bp AGACGACTTTGGATTATAATCAGTTGTTCCTCGGGATaGACACCTGGTTCACAGAGGGCCAAGGGCCTCTCC +
Preference number: 6 (lower is better)
Translates to: RRLWIIISCSSG*TPGSQRAKGLS
Trigger: GGAGAGGCCCTTGGCCCTCTGTGAACCAGGTGTCAATCCCGAGGAACAACTGATTATAATCCAAAGTCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440460.7
ENST00000614104.4
ENST00000615255.1
ENST00000618522.4
CDS CCA 72 bp TTGGATTATAATCAGTTGTTCCTCGGGATTGACACCTaGTTCACAGAGGGCCAAGGGCCTCTCCTGTTCATC +
Preference number: 6 (lower is better)
Translates to: LDYNQLFLGIDT*FTEGQGPLLFI
Trigger: GATGAACAGGAGAGGCCCTTGGCCCTCTGTGAACCAGGTGTCAATCCCGAGGAACAACTGATTATAATCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440460.7
ENST00000614104.4
ENST00000615255.1
ENST00000618522.4
CDS CCA 72 bp GGCCACATAGGCCTGCAGCTGTTGAGAAGGCTCTGTTaGCAGCAAGGAGTTATTGAATCTCATAACCACTTG +
Preference number: 6 (lower is better)
Translates to: GHIGLQLLRRLC*QQGVIESHNHL
Trigger: CAAGTGGTTATGAGATTCAATAACTCCTTGCTGCCAACAGAGCCTTCTCAACAGCTGCAGGCCTATGTGGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS CCA 72 bp TCTGACTGGGTTATAATGGACTCGCTCTTTGCACTGTaGATTGGACTGGGTGAAGTCAGGCTTCTCCACTCT +
Preference number: 6 (lower is better)
Translates to: SDWVIMDSLFAL*IGLGEVRLLHS
Trigger: AGAGTGGAGAAGCCTGACTTCACCCAGTCCAATCCACAGTGCAAAGAGCGAGTCCATTATAACCCAGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614104.4
CDS CAA 90 bp AGAAGGCTCTGTTGGCAGCAAGGAGTTATTGAATCTCATAACCACTaGGGTCCCCATCTTCAAGAGTCCCTAGAAGAGACGAATCAGGGC +
Preference number: 6 (lower is better)
Translates to: RRLCWQQGVIESHNH*GPHLQESLEETNQG
Trigger: GCCCTGATTCGTCTCTTCTAGGGACTCTTGAAGATGGGGACCCAAGTGGTTATGAGATTCAATAACTCCTTGCTGCCAACAGAGCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS CCA 72 bp TCTGACTGGGTTATAATGGACTCGCTCTTTGCACTGTaGATTGGACTGGGTGAAGTCAGGCATTTGACTTGC +
Preference number: 6 (lower is better)
Translates to: SDWVIMDSLFAL*IGLGEVRHLTC
Trigger: GCAAGTCAAATGCCTGACTTCACCCAGTCCAATCCACAGTGCAAAGAGCGAGTCCATTATAACCCAGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615255.1
CDS TCA 72 bp AGCCAGGGAGTGACCAGGTTCCATAAGCCCTCAATCTaGTACTTGGCATTAATTCTCTCCATGGTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: SQGVTRFHKPSI*YLALILSMVFF
Trigger: GAAGAAGACCATGGAGAGAATTAATGCCAAGTATCAGATTGAGGGCTTATGGAACCTGGTCACTCCCTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000440460.7
ENST00000526418.1
ENST00000526500.5
ENST00000615255.1
ENST00000618522.4
CDS GCA 72 bp AATCTCCTCTTTGACAGTGCCAAACTCAGGATCCAGTaGTTTGAAGTGATACCGGTGATTTCCTTCCCGATC +
Preference number: 6 (lower is better)
Translates to: NLLFDSAKLRIQ*FEVIPVISFPI
Trigger: GATCGGGAAGGAAATCACCGGTATCACTTCAAAGCACTGGATCCTGAGTTTGGCACTGTCAAAGAGGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000440460.7
ENST00000526418.1
ENST00000526500.5
ENST00000615255.1
ENST00000618522.4
CDS CAA 72 bp TGTTGGCAGCAAGGAGTTATTGAATCTCATAACCACTaGGGTCCCCATCTTCAAGAGTCCCTAGAAGAGACG +
Preference number: 6 (lower is better)
Translates to: CWQQGVIESHNH*GPHLQESLEET
Trigger: CGTCTCTTCTAGGGACTCTTGAAGATGGGGACCCAAGTGGTTATGAGATTCAATAACTCCTTGCTGCCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529225.5
CDS TCA 72 bp AGGGCCTCTCCTGTTCATCTTCAGGTAAGGATCCATTaGGCAGTAAGGCCTGTAGTCCTGATATCATTTTCT +
Preference number: 6 (lower is better)
Translates to: RASPVHLQVRIH*AVRPVVLISFS
Trigger: AGAAAATGATATCAGGACTACAGGCCTTACTGCTCAATGGATCCTTACCTGAAGATGAACAGGAGAGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000440460.7
ENST00000614104.4
ENST00000615255.1
ENST00000618522.4
CDS CAA 72 bp AAGGGCCTCTCCTGTTCATCTTCAGGTAAGGATCCATaGAGCAGTAAGGCCTGTAGTCCTGATATCATTTTC +
Preference number: 6 (lower is better)
Translates to: KGLSCSSSGKDP*SSKACSPDIIF
Trigger: GAAAATGATATCAGGACTACAGGCCTTACTGCTCAATGGATCCTTACCTGAAGATGAACAGGAGAGGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000440460.7
ENST00000614104.4
ENST00000615255.1
ENST00000618522.4
CDS CAA 72 bp GTCCTGATTCTCCTCCATACTCTGATCCAGACGACTTaGGATTATAATCAGTTGTTCCTCGGGATTGACACC +
Preference number: 6 (lower is better)
Translates to: VLILLHTLIQTT*DYNQLFLGIDT
Trigger: GGTGTCAATCCCGAGGAACAACTGATTATAATCCAAAGTCGTCTGGATCAGAGTATGGAGGAGAATCAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440460.7
ENST00000614104.4
ENST00000615255.1
ENST00000618522.4
CDS TCA 72 bp CAACCTCTTTGGTATATTGACCATGAAGGGCGTAAGTaGCCGGTCAGTGAAATAGAGCACTTTAGTACAGGT +
Preference number: 6 (lower is better)
Translates to: QPLWYIDHEGRK*PVSEIEHFSTG
Trigger: ACCTGTACTAAAGTGCTCTATTTCACTGACCGGTCACTTACGCCCTTCATGGTCAATATACCAAAGAGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440460.7
ENST00000526500.5
ENST00000615255.1
ENST00000618522.4
CDS TCA 72 bp ATGAAAAGAGGGAGTACAGTTCATGTTGAAGAAAACTaGTTTCCAGCAGACAGCGTTCACAGGGTAGCGTTC +
Preference number: 6 (lower is better)
Translates to: MKRGSTVHVEEN*FPADSVHRVAF
Trigger: GAACGCTACCCTGTGAACGCTGTCTGCTGGAAATCAGTTTTCTTCAACATGAACTGTACTCCCTCTTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618522.4
CDS GCA 72 bp GCAATCTGGGGCTGTTTGGGTGACGTTTCTATCTACTaGACTGTATCATCTAACAGAAGAAGTATCAGAGAG +
Preference number: 6 (lower is better)
Translates to: AIWGCLGDVSIY*TVSSNRRSIRE
Trigger: CTCTCTGATACTTCTTCTGTTAGATGATACAGTGCAGTAGATAGAAACGTCACCCAAACAGCCCCAGATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528399.1
CDS GCA 72 bp AGGTTTCCATCCACAATATCTTTAGCCGAAGTCTGGTaGATACGAATCTTTTTAGAGGCCACAAACTGTAGC +
Preference number: 6 (lower is better)
Translates to: RFPSTISLAEVW*IRIFLEATNCS
Trigger: GCTACAGTTTGTGGCCTCTAAAAAGATTCGTATGCACCAGACTTCGGCTAAAGATATTGTGGATGGAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000440460.7
ENST00000528399.1
ENST00000529225.5