RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DIPK1A (Homo sapiens)

Ensembl gene IDs: ENSG00000154511

Ensembl transcript IDs: ENST00000370310.5, ENST00000613047.4, ENST00000613902.4, ENST00000615519.4, ENST00000616709.4

Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCTGCCATTACTTCAGTGATCACATACTGATGGCTTCTCAGGCCTaGGGGGAAGGAGTTTTGTGTAACTGGCCGGAATTTGAAGCCATT +
Preference number: 1 (lower is better)
Translates to: TCHYFSDHILMASQA*GEGVLCNWPEFEAI
Trigger: AATGGCTTCAAATTCCGGCCAGTTACACAAAACTCCTTCCCCCCAGGCCTGAGAAGCCATCAGTATGTGATCACTGAAGTAATGGCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR CCA 90 bp CTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGAATGACATCTTaGGGACCTGTTGATCCTACACCTGCCATTACTTCAGTGATCACA +
Preference number: 1 (lower is better)
Translates to: LRRCNRASKRAGMTS*GPVDPTPAITSVIT
Trigger: TGTGATCACTGAAGTAATGGCAGGTGTAGGATCAACAGGTCCCCAAGATGTCATTCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR TCA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGATCAGTGATCACATACTaGTGGCTTCTCAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGSVITY*WLLRPG
Trigger: CCCAGGCCTGAGAAGCCATCAGTATGTGATCACTGA...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR GCA 90 bp TTATTTGAGGCTAGGTTTTCGAAGTGGGACATAGCGTGTTCCGAACAAACCGACTTTGGCATCACTGATTaGTGTCTGGAGCAGTGCTTC +
Preference number: 2 (lower is better)
Translates to: LFEARFSKWDIACSEQTDFGITD*CLEQCF
Trigger: GAAGCACTGCTCCAGACAGCAATCAGTGATGCCAAA...GTCGGTTTGTTCGGAACACGCTATGTCCCACTTCGAAAACCTAGCCTCAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615519.4
3UTR-3UTR TCA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGAATCTTGGGGACCTGTTaGTCCTACACCTGCCATTAC +
Preference number: 2 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGILGTC*SYTCHY
Trigger: GTAATGGCAGGTGTAGGATCAACAGGTCCCCAAGAT...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR TCA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTTCAGTGATCACATACTaGTGGCTTCTCAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASSVITY*WLLRPG
Trigger: CCCAGGCCTGAGAAGCCATCAGTATGTGATCACTGA...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR TCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTTCAGTGATCACATACTaGTGGCTTCTCAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFSVITY*WLLRPG
Trigger: CCCAGGCCTGAGAAGCCATCAGTATGTGATCACTGA...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR TCA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGACTGCCATTACTTCAGTaGTCACATACTGATGGCTTC +
Preference number: 2 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGLPLLQ*SHTDGF
Trigger: GAAGCCATCAGTATGTGATCACTGAAGTAATGGCAG...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR TCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTATCTTGGGGACCTGTTaGTCCTACACCTGCCATTAC +
Preference number: 2 (lower is better)
Translates to: FLLNSSFNANTMLPALVFILGTC*SYTCHY
Trigger: GTAATGGCAGGTGTAGGATCAACAGGTCCCCAAGAT...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR TCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTCTAAAAGGGCAGGAATaGCATCTTGGGGACCTGTTG +
Preference number: 2 (lower is better)
Translates to: FLLNSSFNANTMLPALVFLKGQE*HLGDLL
Trigger: CAACAGGTCCCCAAGATGTCATTCCTGCCCTTTTAG...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR GCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTAAGGGCTCAGTCAGCTaGGTGATACTAAGATGGGCC +
Preference number: 2 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFKGSVS*VILRWA
Trigger: GGCCCATCTTAGTATCACGCAGCTGACTGAGCCCTT...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR TCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTATCTTGGGGACCTGTTaGTCCTACACCTGCCATTAC +
Preference number: 2 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFILGTC*SYTCHY
Trigger: GTAATGGCAGGTGTAGGATCAACAGGTCCCCAAGAT...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR CCA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGAGGAGTTTTGTGTAACTaGCCGGAATTTGAAGCCATT +
Preference number: 2 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGGVLCN*PEFEAI
Trigger: AATGGCTTCAAATTCCGGCCAGTTACACAAAACTCC...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR CCA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTGCAGGAATGACATCTTaGGGACCTGTTGATCCTACA +
Preference number: 2 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASAGMTS*GPVDPT
Trigger: TGTAGGATCAACAGGTCCCCAAGATGTCATTCCTGC...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR TCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTATCTTGGGGACCTGTTaGTCCTACACCTGCCATTAC +
Preference number: 2 (lower is better)
Translates to: INFLVEQQLQCKHNASSIILGTC*SYTCHY
Trigger: GTAATGGCAGGTGTAGGATCAACAGGTCCCCAAGAT...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR TCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTCTAAAAGGGCAGGAATaGCATCTTGGGGACCTGTTG +
Preference number: 2 (lower is better)
Translates to: INFLVEQQLQCKHNASSILKGQE*HLGDLL
Trigger: CAACAGGTCCCCAAGATGTCATTCCTGCCCTTTTAG...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR CCA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTGGAGTTTTGTGTAACTaGCCGGAATTTGAAGCCATT +
Preference number: 2 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASGVLCN*PEFEAI
Trigger: AATGGCTTCAAATTCCGGCCAGTTACACAAAACTCC...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR CCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTGGAGTTTTGTGTAACTaGCCGGAATTTGAAGCCATT +
Preference number: 2 (lower is better)
Translates to: FLLNSSFNANTMLPALVFGVLCN*PEFEAI
Trigger: AATGGCTTCAAATTCCGGCCAGTTACACAAAACTCC...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR TCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTCTGCCATTACTTCAGTaGTCACATACTGATGGCTTC +
Preference number: 2 (lower is better)
Translates to: INFLVEQQLQCKHNASSILPLLQ*SHTDGF
Trigger: GAAGCCATCAGTATGTGATCACTGAAGTAATGGCAG...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR TCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTTTGATGTTTATGGAATaGAGCTTTTCACAGCATTGG +
Preference number: 2 (lower is better)
Translates to: FLLNSSFNANTMLPALVFLMFME*SFSQHW
Trigger: CCAATGCTGTGAAAAGCTTCATTCCATAAACATCAA...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR TCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTCTAAGATGGGCCCTTTaGATCTTTAGGAAAGTTCAT +
Preference number: 2 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFLRWAL*IFRKVH
Trigger: ATGAACTTTCCTAAAGATTCAAAGGGCCCATCTTAG...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR CCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGAGTTTTGTGTAACTaGCCGGAATTTGAAGCCATT +
Preference number: 2 (lower is better)
Translates to: INFLVEQQLQCKHNASSIGVLCN*PEFEAI
Trigger: AATGGCTTCAAATTCCGGCCAGTTACACAAAACTCC...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR TCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTTTGATGTTTATGGAATaGAGCTTTTCACAGCATTGG +
Preference number: 2 (lower is better)
Translates to: INFLVEQQLQCKHNASSILMFME*SFSQHW
Trigger: CCAATGCTGTGAAAAGCTTCATTCCATAAACATCAA...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR GCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTTCAATGCAAACACAATaGTTCCAGCATTGGTATTTT +
Preference number: 2 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFSMQTQ*FQHWYF
Trigger: AAAATACCAATGCTGGAAGCATTGTGTTTGCATTGA...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR GCA 72 bp CGTGTTCCGAACAAACCGACGTTTGGCATCACTGATTaGTGTCTGGAGCAGTGCTTCGCAAAAGTTTGGCAC +
Preference number: 3 (lower is better)
Translates to: RVPNKPTFGITD*CLEQCFAKVWH
Trigger: GTGCCAAACTTTTGCGAAGCACTGCTCCAGACAGCAATCAGTGATGCCAAACGTCGGTTTGTTCGGAACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615519.4
3UTR TCA 72 bp TTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGAATaGCATCTTGGGGACCTGTTGATCCTACACCTGCCA +
Preference number: 3 (lower is better)
Translates to: FGDVTGLLKGQE*HLGDLLILHLP
Trigger: TGGCAGGTGTAGGATCAACAGGTCCCCAAGATGTCATTCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR TCA 72 bp ATAGCGTGTTCCGAACAAACCGACGTTTGGCATCACTaGTTGCTGTCTGGAGCAGTGCTTCGCAAAAGTTTG +
Preference number: 3 (lower is better)
Translates to: IACSEQTDVWHH*LLSGAVLRKSL
Trigger: CAAACTTTTGCGAAGCACTGCTCCAGACAGCAATCAGTGATGCCAAACGTCGGTTTGTTCGGAACACGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615519.4
3UTR CCA 72 bp TGTAACAGGGCTTCTAAAAGGGCAGGAATGACATCTTaGGGACCTGTTGATCCTACACCTGCCATTACTTCA +
Preference number: 3 (lower is better)
Translates to: CNRASKRAGMTS*GPVDPTPAITS
Trigger: TGAAGTAATGGCAGGTGTAGGATCAACAGGTCCCCAAGATGTCATTCCTGCCCTTTTAGAAGCCCTGTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR CAA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTCATCTTGGGGACCTGTaGATCCTACACCTGCCATTA +
Preference number: 3 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASHLGDL*ILHLPL
Trigger: TAATGGCAGGTGTAGGATCAACAGGTCCCCAAGATG...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR CAA 90 bp CTTTTGAAAAACATAACATGGGAAGCGAGAGAGGTACGTAGTTGTTATTTGAGGCGAACAAACCGACGTTaGGCATCACTGATTGCTGTC +
Preference number: 3 (lower is better)
Translates to: LLKNITWEAREVRSCYLRRTNRR*ASLIAV
Trigger: GACAGCAATCAGTGATGCCAAACGTCGGTTTGTTCG...CCTCAAATAACAACTACGTACCTCTCTCGCTTCCCATGTTATGTTTTTCAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615519.4
3UTR-3UTR CAA 90 bp ATTACTGCTGAATGTGCTCTTGCCCAGTTAAGCTTTGTGGCAGGTAATTTAGGCGTACGTAGTTGTTATTaGAGGCTAGGTTTTCGAAGT +
Preference number: 3 (lower is better)
Translates to: ITAECALAQLSFVAGNLGVRSCY*RLGFRS
Trigger: ACTTCGAAAACCTAGCCTCAAATAACAACTACGTAC...GCCTAAATTACCTGCCACAAAGCTTAACTGGGCAAGAGCACATTCAGCAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615519.4
3UTR TCA 72 bp GGCTCAGTCAGCTGCGTGATACTAAGATGGGCCCTTTaGATCTTTAGGAAAGTTCATCCATTTTTAGTCAAT +
Preference number: 3 (lower is better)
Translates to: GSVSCVILRWAL*IFRKVHPFLVN
Trigger: ATTGACTAAAAATGGATGAACTTTCCTAAAGATTCAAAGGGCCCATCTTAGTATCACGCAGCTGACTGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
3UTR-3UTR CAA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTCATCTTGGGGACCTGTaGATCCTACACCTGCCATTA +
Preference number: 3 (lower is better)
Translates to: INFLVEQQLQCKHNASSIHLGDL*ILHLPL
Trigger: TAATGGCAGGTGTAGGATCAACAGGTCCCCAAGATG...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR GCA 90 bp AAACCGACGTTTGGCATCACTGATTGCTGTCTGGAGCAGTGCTTCGCAAAAGTTATCGCCCCGCCGCGCTaGAGTCAGAGGCGGACCCGA +
Preference number: 4 (lower is better)
Translates to: KPTFGITDCCLEQCFAKVIAPPR*SQRRTR
Trigger: TCGGGTCCGCCTCTGACTGCAGCGCGGCGGGGCGAT...AACTTTTGCGAAGCACTGCTCCAGACAGCAATCAGTGATGCCAAACGTCGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS-3UTR GCA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGAATCGCCCCGCCGCGCTaGAGTCAGAGGCGGACCCGA +
Preference number: 4 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGIAPPR*SQRRTR
Trigger: TCGGGTCCGCCTCTGACTGCAGCGCGGCGGGGCGAT...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp CGAACAAACCGACGTTTGGCATCACTGATTGCTGTCTGGAGCAGTGCTTCGCAAGCCCCAAGGGTGGGATaGAATGTTGCTTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: RTNRRLASLIAVWSSASQAPRVG*NVALAD
Trigger: ATCAGCTAAAGCAACATTTCATCCCACCCTTGGGGC...TTGCGAAGCACTGCTCCAGACAGCAATCAGTGATGCCAAACGTCGGTTTGTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS-3UTR GCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTATCGCCCCGCCGCGCTaGAGTCAGAGGCGGACCCGA +
Preference number: 4 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFIAPPR*SQRRTR
Trigger: TCGGGTCCGCCTCTGACTGCAGCGCGGCGGGGCGAT...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613902.4
ENST00000616709.4
CDS-3UTR GCA 90 bp CCGAACAAACCGACGTTTGGCATCACTGATTGCTGTCTGGAGCAGTGCTTCGCATTTGGCATCACTGATTaGTGTCTGGAGCAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: PNKPTFGITDCCLEQCFAFGITD*CLEQCF
Trigger: GAAGCACTGCTCCAGACAGCAATCAGTGATGCCAAA...TGCGAAGCACTGCTCCAGACAGCAATCAGTGATGCCAAACGTCGGTTTGTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS-3UTR TCA 90 bp AGTGGGGGAATTACTGCTGAATGTGCTCTTGCCCAGTTAAGCTTTGTGGCAGGTTTTCATCCGCACATATaGGAAGCGAGCCTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: SGGITAECALAQLSFVAGFHPHI*EASLEV
Trigger: TACCTCCAGGCTCGCTTCTCATATGTGCGGATGAAA...ACCTGCCACAAAGCTTAACTGGGCAAGAGCACATTCAGCAGTAATTCCCCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS-3UTR TCA 90 bp AAACCGACGTTTGGCATCACTGATTGCTGTCTGGAGCAGTGCTTCGCAAAAGTTGACGTTTGGCATCACTaGTTGCTGTCTGGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: KPTFGITDCCLEQCFAKVDVWHH*LLSGAV
Trigger: CACTGCTCCAGACAGCAATCAGTGATGCCAAACGTC...AACTTTTGCGAAGCACTGCTCCAGACAGCAATCAGTGATGCCAAACGTCGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS-3UTR CCA 90 bp GAGGCTAGGTTTTCGAAGTGGGACATAGCGTGTTCCGAACAAACCGACGTTTGGTCACTGATTGCTGTCTaGAGCAGTGCTTCGCAAAAG +
Preference number: 4 (lower is better)
Translates to: EARFSKWDIACSEQTDVWSLIAV*SSASQK
Trigger: CTTTTGCGAAGCACTGCTCCAGACAGCAATCAGTGA...CCAAACGTCGGTTTGTTCGGAACACGCTATGTCCCACTTCGAAAACCTAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS-3UTR TCA 90 bp TGGGAAGCGAGAGAGGTACGTAGTTGTTATTTGAGGCTAGGTTTTCGAAGTGGGTGGGGGAATTACTGCTaGATGTGCTCTTGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: WEAREVRSCYLRLGFRSGWGNYC*MCSCPV
Trigger: AACTGGGCAAGAGCACATTCAGCAGTAATTCCCCCA...CCCACTTCGAAAACCTAGCCTCAAATAACAACTACGTACCTCTCTCGCTTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS-3UTR CCA 90 bp GAAGTGGGACATAGCGTGTTCCGAACAAACCGACGTTTGGCATCACTGATTGCTGCTAGGTTTTCGAAGTaGGACATAGCGTGTTCCGAA +
Preference number: 4 (lower is better)
Translates to: EVGHSVFRTNRRLASLIAARFSK*DIACSE
Trigger: TTCGGAACACGCTATGTCCCACTTCGAAAACCTAGC...AGCAATCAGTGATGCCAAACGTCGGTTTGTTCGGAACACGCTATGTCCCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS-3UTR CCA 90 bp CCGAACAAACCGACGTTTGGCATCACTGATTGCTGTCTGGAGCAGTGCTTCGCATTGAAAAACATAACATaGGAAGCGAGAGAGGTACGT +
Preference number: 4 (lower is better)
Translates to: PNKPTFGITDCCLEQCFALKNIT*EAREVR
Trigger: ACGTACCTCTCTCGCTTCCCATGTTATGTTTTTCAA...TGCGAAGCACTGCTCCAGACAGCAATCAGTGATGCCAAACGTCGGTTTGTTCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS-3UTR GCA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGATGCCCATGCCGACTTTaGTTCTCCCAAGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGCPCRL*FSQGNL
Trigger: CAGGTTTCCTTGGGAGAAGCAAAGTCGGCATGGGCA...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGATTGGCCATGATGGTGTaGACAGCTGATCCATGCTTC +
Preference number: 4 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGLAMMV*TADPCF
Trigger: GAAGCATGGATCAGCTGTTCACACCATCATGGCCAA...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGAGATGGTGTGAACAGCTaGTCCATGCTTCTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGDGVNS*SMLLLN
Trigger: GTTCAGAAGAAGCATGGATCAGCTGTTCACACCATC...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTTCAGTGATCACATACTaGTGGCTTCTCAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFSVITY*WLLRPG
Trigger: CCCAGGCCTGAGAAGCCATCAGTATGTGATCACTGA...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGATTAAGATGTCAGTTTTaGAGGGCTCAGTCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGLRCQF*RAQSAA
Trigger: CGCAGCTGACTGAGCCCTTCAAAACTGACATCTTAA...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR GCA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGATTGAAGAAGTGCCCATaGCGACTTTGCTTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGLKKCP*RLCFSQ
Trigger: TTGGGAGAAGCAAAGTCGGCATGGGCACTTCTTCAA...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR GCA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAGGGCTCAGTCAGCTaGGTGATACTAAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASKGSVS*VILRWA
Trigger: GGCCCATCTTAGTATCACGCAGCTGACTGAGCCCTT...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CCA 90 bp AGTGGGGGAATTACTGCTGAATGTGCTCTTGCCCAGTTAAGCTTTGTGGCAGGTGATTGTTGGGCTTGGTaGATAAACATTTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SGGITAECALAQLSFVAGDCWAW*INIFQS
Trigger: ACTTTGGAAAATGTTTATCCACCAAGCCCAACAATC...ACCTGCCACAAAGCTTAACTGGGCAAGAGCACATTCAGCAGTAATTCCCCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS-3UTR CCA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGATCTCCCAAGGAAACCTaGCCATCTTTGTCTCCATCA +
Preference number: 4 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGSPKET*PSLSPS
Trigger: TGATGGAGACAAAGATGGCCAGGTTTCCTTGGGAGA...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTTTTCATCCGCACATATaGGAAGCGAGCCTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASFHPHI*EASLEV
Trigger: TACCTCCAGGCTCGCTTCTCATATGTGCGGATGAAA...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370310.5
ENST00000616709.4
CDS-3UTR TCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTTTGGCCATGATGGTGTaGACAGCTGATCCATGCTTC +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFLAMMV*TADPCF
Trigger: GAAGCATGGATCAGCTGTTCACACCATCATGGCCAA...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTCTAAAAGGGCAGGAATaGCATCTTGGGGACCTGTTG +
Preference number: 4 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASLKGQE*HLGDLL
Trigger: CAACAGGTCCCCAAGATGTCATTCCTGCCCTTTTAG...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGAGGTAGGCGAAACCTTTaGGCAGAAAATAGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGGRRNL*AENSGS
Trigger: AGAACCACTATTTTCTGCTCAAAGGTTTCGCCTACC...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR GCA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGAACAAAGGCTGTTACATaGAGGCCCATCAATAACTCC +
Preference number: 4 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGTKAVT*RPINNS
Trigger: GGAGTTATTGATGGGCCTGCATGTAACAGCCTTTGT...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR GCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTTGCCCATGCCGACTTTaGTTCTCCCAAGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFCPCRL*FSQGNL
Trigger: CAGGTTTCCTTGGGAGAAGCAAAGTCGGCATGGGCA...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR GCA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGAATTCAGTTGAAGAAGTaGCCATGCCGACTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGIQLKK*PCRLCF
Trigger: GAAGCAAAGTCGGCATGGGCACTTCTTCAACTGAAT...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTTTTCATCCGCACATATaGGAAGCGAGCCTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFFHPHI*EASLEV
Trigger: TACCTCCAGGCTCGCTTCTCATATGTGCGGATGAAA...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370310.5
ENST00000616709.4
CDS-3UTR TCA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTGATGGTGTGAACAGCTaGTCCATGCTTCTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASDGVNS*SMLLLN
Trigger: GTTCAGAAGAAGCATGGATCAGCTGTTCACACCATC...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTTCAGTGATCACATACTaGTGGCTTCTCAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSISVITY*WLLRPG
Trigger: CCCAGGCCTGAGAAGCCATCAGTATGTGATCACTGA...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTCTAAAAGGGCAGGAATaGCATCTTGGGGACCTGTTG +
Preference number: 4 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFLKGQE*HLGDLL
Trigger: CAACAGGTCCCCAAGATGTCATTCCTGCCCTTTTAG...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTTTTCATCCGCACATATaGGAAGCGAGCCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFFHPHI*EASQGF
Trigger: AAAGCCCTGGCTCGCTTCTCATATGTGCGGATGAAA...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613047.4
CDS-3UTR GCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTTGCCCATGCCGACTTTaGTTCTCCCAAGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSICPCRL*FSQGNL
Trigger: CAGGTTTCCTTGGGAGAAGCAAAGTCGGCATGGGCA...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR GCA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTTTGAAGAAGTGCCCATaGCGACTTTGCTTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASLKKCP*RLCFSQ
Trigger: TTGGGAGAAGCAAAGTCGGCATGGGCACTTCTTCAA...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR GCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTTTGAAGAAGTGCCCATaGCGACTTTGCTTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFLKKCP*RLCFSQ
Trigger: TTGGGAGAAGCAAAGTCGGCATGGGCACTTCTTCAA...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR GCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTAAGGGCTCAGTCAGCTaGGTGATACTAAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSIKGSVS*VILRWA
Trigger: GGCCCATCTTAGTATCACGCAGCTGACTGAGCCCTT...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTGCAGGAATGACATCTTaGGGACCTGTTGATCCTACA +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFAGMTS*GPVDPT
Trigger: TGTAGGATCAACAGGTCCCCAAGATGTCATTCCTGC...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTAGCGCTTGTTCCATTTaGCATTTCACAACACCTGGT +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFSACSI*HFTTPG
Trigger: ACCAGGTGTTGTGAAATGTCAAATGGAACAAGCGCT...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
CDS-3UTR TCA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAGAAATTCATTCAGTTaGAGAAGTGCCCATGCCGAC +
Preference number: 4 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASRNSFS*RSAHAD
Trigger: GTCGGCATGGGCACTTCTTCAACTGAATGAATTTCT...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTAGAAATTCATTCAGTTaGAGAAGTGCCCATGCCGAC +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFRNSFS*RSAHAD
Trigger: GTCGGCATGGGCACTTCTTCAACTGAATGAATTTCT...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTGATGGTGTGAACAGCTaGTCCATGCTTCTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFDGVNS*SMLLLN
Trigger: GTTCAGAAGAAGCATGGATCAGCTGTTCACACCATC...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTTTGGCCATGATGGTGTaGACAGCTGATCCATGCTTC +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSILAMMV*TADPCF
Trigger: GAAGCATGGATCAGCTGTTCACACCATCATGGCCAA...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTCTGCCATTACTTCAGTaGTCACATACTGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFLPLLQ*SHTDGF
Trigger: GAAGCCATCAGTATGTGATCACTGAAGTAATGGCAG...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTCTGCCATTACTTCAGTaGTCACATACTGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASLPLLQ*SHTDGF
Trigger: GAAGCCATCAGTATGTGATCACTGAAGTAATGGCAG...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTTTAAGATGTCAGTTTTaGAGGGCTCAGTCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFLRCQF*RAQSAA
Trigger: CGCAGCTGACTGAGCCCTTCAAAACTGACATCTTAA...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTGGTAGGCGAAACCTTTaGGCAGAAAATAGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFGRRNL*AENSGS
Trigger: AGAACCACTATTTTCTGCTCAAAGGTTTCGCCTACC...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGAGAGAAAGCTGTCCAGTaGTGGTCACATAGATTTTTA +
Preference number: 4 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGEKAVQ*WSHRFL
Trigger: TAAAAATCTATGTGACCATCACTGGACAGCTTTCTC...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR GCA 90 bp CTTTTGAAAAACATAACATGGGAAGCGAGAGAGGTACGTAGTTGTTATTTGAGGACAAAGGCTGTTACATaGAGGCCCATCAATAACTCC +
Preference number: 4 (lower is better)
Translates to: LLKNITWEAREVRSCYLRTKAVT*RPINNS
Trigger: GGAGTTATTGATGGGCCTGCATGTAACAGCCTTTGT...CCTCAAATAACAACTACGTACCTCTCTCGCTTCCCATGTTATGTTTTTCAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS-3UTR GCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTTTGAAGAAGTGCCCATaGCGACTTTGCTTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFLKKCP*RLCFSQ
Trigger: TTGGGAGAAGCAAAGTCGGCATGGGCACTTCTTCAA...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR GCA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTATTCAGTTGAAGAAGTaGCCATGCCGACTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASIQLKK*PCRLCF
Trigger: GAAGCAAAGTCGGCATGGGCACTTCTTCAACTGAAT...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR GCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTGAACAGCAGCTTCAATaGAAACACAATGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFEQQLQ*KHNASS
Trigger: GCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTC...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR GCA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTGAACAGCAGCTTCAATaGAAACACAATGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASEQQLQ*KHNASS
Trigger: GCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTC...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTGCAGGAATGACATCTTaGGGACCTGTTGATCCTACA +
Preference number: 4 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFAGMTS*GPVDPT
Trigger: TGTAGGATCAACAGGTCCCCAAGATGTCATTCCTGC...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGATGGTTGTATCACTTCTaGAGTACACTTCATTGTACT +
Preference number: 4 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGWLYHF*STLHCT
Trigger: AGTACAATGAAGTGTACTTCAGAAGTGATACAACCA...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTGCAGTAGGTAGTCTTTaGGTAACTGACAAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFAVGSL*VTDKLL
Trigger: CAAAAGCTTGTCAGTTACTCAAAGACTACCTACTGC...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTTTAAGATGTCAGTTTTaGAGGGCTCAGTCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSILRCQF*RAQSAA
Trigger: CGCAGCTGACTGAGCCCTTCAAAACTGACATCTTAA...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAGGATATGTGGATCTTaGTTGGGCCTTAAGATGTCA +
Preference number: 4 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASRICGS*LGLKMS
Trigger: TGACATCTTAAGGCCCAATCAAGATCCACATATCCT...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTAGGATATGTGGATCTTaGTTGGGCCTTAAGATGTCA +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFRICGS*LGLKMS
Trigger: TGACATCTTAAGGCCCAATCAAGATCCACATATCCT...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTTCACCCAATTTTGCCTaGTTGTTGGGCTTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSISPNFA*LLGLVD
Trigger: ATCCACCAAGCCCAACAATCAGGCAAAATTGGGTGA...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616709.4
CDS-3UTR GCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTACAAAGGCTGTTACATaGAGGCCCATCAATAACTCC +
Preference number: 4 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFTKAVT*RPINNS
Trigger: GGAGTTATTGATGGGCCTGCATGTAACAGCCTTTGT...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CCA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGAGATTGTTGGGCTTGGTaGATAAACATTTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGDCWAW*INIFQS
Trigger: ACTTTGGAAAATGTTTATCCACCAAGCCCAACAATC...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTTCAGAGAGGTTTCCTTaGTCACCCAATTTTGCCTTA +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFSERFP*SPNFAL
Trigger: TAAGGCAAAATTGGGTGACCAAGGAAACCTCTCTGA...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
CDS-3UTR CCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTTCTCCCAAGGAAACCTaGCCATCTTTGTCTCCATCA +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSISPKET*PSLSPS
Trigger: TGATGGAGACAAAGATGGCCAGGTTTCCTTGGGAGA...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CCA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGAATTCTAGAAGTCCTATaGCTATTTTGGCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGILEVL*LFWPFL
Trigger: CAAGAAAGGCCAAAATAGCCATAGGACTTCTAGAAT...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGCAGGAATGACATCTTaGGGACCTGTTGATCCTACA +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSIAGMTS*GPVDPT
Trigger: TGTAGGATCAACAGGTCCCCAAGATGTCATTCCTGC...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTAGCGCTTGTTCCATTTaGCATTTCACAACACCTGGT +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSISACSI*HFTTPG
Trigger: ACCAGGTGTTGTGAAATGTCAAATGGAACAAGCGCT...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
CDS-3UTR TCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTGCAGTAGGTAGTCTTTaGGTAACTGACAAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFAVGSL*VTDKLL
Trigger: CAAAAGCTTGTCAGTTACTCAAAGACTACCTACTGC...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTCTAAGATGGGCCCTTTaGATCTTTAGGAAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFLRWAL*IFRKVH
Trigger: ATGAACTTTCCTAAAGATTCAAAGGGCCCATCTTAG...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTAGGATATGTGGATCTTaGTTGGGCCTTAAGATGTCA +
Preference number: 4 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFRICGS*LGLKMS
Trigger: TGACATCTTAAGGCCCAATCAAGATCCACATATCCT...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTAGGCGAAACCTTTaGGCAGAAAATAGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSIGRRNL*AENSGS
Trigger: AGAACCACTATTTTCTGCTCAAAGGTTTCGCCTACC...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTGAGAAAGCTGTCCAGTaGTGGTCACATAGATTTTTA +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFEKAVQ*WSHRFL
Trigger: TAAAAATCTATGTGACCATCACTGGACAGCTTTCTC...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTAGATATTCTGGAAACTaGGGAGACGCTAACAATTGT +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFRYSGN*GDANNC
Trigger: ACAATTGTTAGCGTCTCCTCAGTTTCCAGAATATCT...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613047.4
CDS-3UTR GCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTACAAAGGCTGTTACATaGAGGCCCATCAATAACTCC +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSITKAVT*RPINNS
Trigger: GGAGTTATTGATGGGCCTGCATGTAACAGCCTTTGT...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR GCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTATTCAGTTGAAGAAGTaGCCATGCCGACTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSIIQLKK*PCRLCF
Trigger: GAAGCAAAGTCGGCATGGGCACTTCTTCAACTGAAT...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR GCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGAACAGCAGCTTCAATaGAAACACAATGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSIEQQLQ*KHNASS
Trigger: GCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTC...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CCA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTCCTGATTGTTGGGCTTaGTGGATAAACATTTTCCAA +
Preference number: 4 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASPDCWA*WINIFQ
Trigger: TTGGAAAATGTTTATCCACCAAGCCCAACAATCAGG...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616709.4
CDS-3UTR TCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTAAATCAGACTCACAGTaGCGATCCTTAATAAGTTCT +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFKSDSQ*RSLISS
Trigger: AGAACTTATTAAGGATCGTCACTGTGAGTCTGATTT...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGCAGTAGGTAGTCTTTaGGTAACTGACAAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSIAVGSL*VTDKLL
Trigger: CAAAAGCTTGTCAGTTACTCAAAGACTACCTACTGC...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTTTGATGTTTATGGAATaGAGCTTTTCACAGCATTGG +
Preference number: 4 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASLMFME*SFSQHW
Trigger: CCAATGCTGTGAAAAGCTTCATTCCATAAACATCAA...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTAGGATATGTGGATCTTaGTTGGGCCTTAAGATGTCA +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSIRICGS*LGLKMS
Trigger: TGACATCTTAAGGCCCAATCAAGATCCACATATCCT...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTGATTGTTGGGCTTGGTaGATAAACATTTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFDCWAW*INIFQS
Trigger: ACTTTGGAAAATGTTTATCCACCAAGCCCAACAATC...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTTCAGAGAGGTTTCCTTaGTCACCCAATTTTGCCTTA +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSISERFP*SPNFAL
Trigger: TAAGGCAAAATTGGGTGACCAAGGAAACCTCTCTGA...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
CDS-3UTR CCA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTATTCTAGAAGTCCTATaGCTATTTTGGCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASILEVL*LFWPFL
Trigger: CAAGAAAGGCCAAAATAGCCATAGGACTTCTAGAAT...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTTATGTGGATCTTGATTaGGCCTTAAGATGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFYVDLD*ALRCQF
Trigger: AAACTGACATCTTAAGGCCCAATCAAGATCCACATA...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTAAATCAGACTCACAGTaGCGATCCTTAATAAGTTCT +
Preference number: 4 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFKSDSQ*RSLISS
Trigger: AGAACTTATTAAGGATCGTCACTGTGAGTCTGATTT...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTTGGTTGTATCACTTCTaGAGTACACTTCATTGTACT +
Preference number: 4 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFWLYHF*STLHCT
Trigger: AGTACAATGAAGTGTACTTCAGAAGTGATACAACCA...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTTTGATGTTTATGGAATaGAGCTTTTCACAGCATTGG +
Preference number: 4 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFLMFME*SFSQHW
Trigger: CCAATGCTGTGAAAAGCTTCATTCCATAAACATCAA...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTCTAAGATGGGCCCTTTaGATCTTTAGGAAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSILRWAL*IFRKVH
Trigger: ATGAACTTTCCTAAAGATTCAAAGGGCCCATCTTAG...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGAGAAAGCTGTCCAGTaGTGGTCACATAGATTTTTA +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSIEKAVQ*WSHRFL
Trigger: TAAAAATCTATGTGACCATCACTGGACAGCTTTCTC...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTGATTGTTGGGCTTGGTaGATAAACATTTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFDCWAW*INIFQS
Trigger: ACTTTGGAAAATGTTTATCCACCAAGCCCAACAATC...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTTCTGATTGTTGGGCTTaGTGGATAAACATTTTCCAA +
Preference number: 4 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFSDCWA*WINIFQ
Trigger: TTGGAAAATGTTTATCCACCAAGCCCAACAATCAGA...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
CDS-3UTR CCA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTAATACATCTGATTGTTaGGCTTGGTGGATAAACATT +
Preference number: 4 (lower is better)
Translates to: FLLNSSFNANTMLPALVFNTSDC*AWWINI
Trigger: AATGTTTATCCACCAAGCCCAACAATCAGATGTATT...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
CDS-3UTR CCA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAATACATCTGATTGTTaGGCTTGGTGGATAAACATT +
Preference number: 4 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASNTSDC*AWWINI
Trigger: AATGTTTATCCACCAAGCCCAACAATCAGATGTATT...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
CDS-3UTR CCA 90 bp CTTTTGAAAAACATAACATGGGAAGCGAGAGAGGTACGTAGTTGTTATTTGAGGAATACATCTGATTGTTaGGCTTGGTGGATAAACATT +
Preference number: 4 (lower is better)
Translates to: LLKNITWEAREVRSCYLRNTSDC*AWWINI
Trigger: AATGTTTATCCACCAAGCCCAACAATCAGATGTATT...CCTCAAATAACAACTACGTACCTCTCTCGCTTCCCATGTTATGTTTTTCAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS-3UTR CCA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTTATGTGGATCTTGATTaGGCCTTAAGATGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFYVDLD*ALRCQF
Trigger: AAACTGACATCTTAAGGCCCAATCAAGATCCACATA...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTAAATCAGACTCACAGTaGCGATCCTTAATAAGTTCT +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSIKSDSQ*RSLISS
Trigger: AGAACTTATTAAGGATCGTCACTGTGAGTCTGATTT...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR TCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTTGGTTGTATCACTTCTaGAGTACACTTCATTGTACT +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSIWLYHF*STLHCT
Trigger: AGTACAATGAAGTGTACTTCAGAAGTGATACAACCA...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR GCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTTTGGTCACCCAATTTTaGCTTAAAGAGACTATAGAC +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSILVTQF*LKETID
Trigger: GTCTATAGTCTCTTTAAGGCAAAATTGGGTGACCAA...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
CDS-3UTR CCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTATTCTAGAAGTCCTATaGCTATTTTGGCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSIILEVL*LFWPFL
Trigger: CAAGAAAGGCCAAAATAGCCATAGGACTTCTAGAAT...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTATTTTGCCTGATTGTTaGGCTTGGTGGATAAACATT +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSIILPDC*AWWINI
Trigger: AATGTTTATCCACCAAGCCCAACAATCAGGCAAAAT...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616709.4
CDS-3UTR GCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTTCAATGCAAACACAATaGTTCCAGCATTGGTATTTT +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSISMQTQ*FQHWYF
Trigger: AAAATACCAATGCTGGAAGCATTGTGTTTGCATTGA...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CCA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTAATACATCTGATTGTTaGGCTTGGTGGATAAACATT +
Preference number: 4 (lower is better)
Translates to: INFLVEQQLQCKHNASSINTSDC*AWWINI
Trigger: AATGTTTATCCACCAAGCCCAACAATCAGATGTATT...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
CDS CCA 90 bp AGCGTGTTCCGAACAAACCGACGTTTGGCATCACTGATTGCTGTCTaGAGCAGTGCTTCGCAAAAGTTTGGCACAATTACCGGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: SVFRTNRRLASLIAV*SSASQKFGTITGAG
Trigger: ACCAGCACCGGTAATTGTGCCAAACTTTTGCGAAGCACTGCTCCAGACAGCAATCAGTGATGCCAAACGTCGGTTTGTTCGGAACACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS-3UTR CAA 90 bp CGACGTTTGGCATCACTGATTGCTGTCTGGAGCAGTGCTTCGCAAAAGTTTGGCCGAACAAACCGACGTTaGGCATCACTGATTGCTGTC +
Preference number: 5 (lower is better)
Translates to: RRLASLIAVWSSASQKFGRTNRR*ASLIAV
Trigger: GACAGCAATCAGTGATGCCAAACGTCGGTTTGTTCG...GCCAAACTTTTGCGAAGCACTGCTCCAGACAGCAATCAGTGATGCCAAACGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS GCA 90 bp CCGAACAAACCGACGTTTGGCATCACTGATTGCTGTCTGGAGCAGTaGTTCGCAAAAGTTTGGCACAATTACCGGTGCTGGTCCTTAAAG +
Preference number: 5 (lower is better)
Translates to: PNKPTFGITDCCLEQ*FAKVWHNYRCWSLK
Trigger: CTTTAAGGACCAGCACCGGTAATTGTGCCAAACTTTTGCGAAGCACTGCTCCAGACAGCAATCAGTGATGCCAAACGTCGGTTTGTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS TCA 90 bp AAGTGGGACATAGCGTGTTCCGAACAAACCGACGTTTGGCATCACTaGTTGCTGTCTGGAGCAGTGCTTCGCAAAAGTTTGGCACAATTA +
Preference number: 5 (lower is better)
Translates to: KWDIACSEQTDVWHH*LLSGAVLRKSLAQL
Trigger: TAATTGTGCCAAACTTTTGCGAAGCACTGCTCCAGACAGCAATCAGTGATGCCAAACGTCGGTTTGTTCGGAACACGCTATGTCCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS-3UTR CAA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTGTGCCCATGCCGACTTaGCTTCTCCCAAGGAAACCT +
Preference number: 5 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASVPMPT*LLPRKP
Trigger: AGGTTTCCTTGGGAGAAGCAAAGTCGGCATGGGCAC...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTGTGCCCATGCCGACTTaGCTTCTCCCAAGGAAACCT +
Preference number: 5 (lower is better)
Translates to: FLLNSSFNANTMLPALVFVPMPT*LLPRKP
Trigger: AGGTTTCCTTGGGAGAAGCAAAGTCGGCATGGGCAC...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGACTTCACGAATTTCACTaGGAGCACCACGCAGTAGGT +
Preference number: 5 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGLHEFH*EHHAVG
Trigger: ACCTACTGCGTGGTGCTCCAAGTGAAATTCGTGAAG...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp CGTTTGGCATCACTGATTGCTGTCTGGAGCAGTGCTTCGCAAAAGTTTGGCACAGTACGTAGTTGTTATTaGAGGCTAGGTTTTCGAAGT +
Preference number: 5 (lower is better)
Translates to: RLASLIAVWSSASQKFGTVRSCY*RLGFRS
Trigger: ACTTCGAAAACCTAGCCTCAAATAACAACTACGTAC...TGTGCCAAACTTTTGCGAAGCACTGCTCCAGACAGCAATCAGTGATGCCAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS-3UTR CAA 90 bp TGTTTTAGTGGGGGAATTACTGCTGAATGTGCTCTTGCCCAGTTAAGCTTTGTGAAGCGCTTGTTCCATTaGACATTTCACAACACCTGG +
Preference number: 5 (lower is better)
Translates to: CFSGGITAECALAQLSFVKRLFH*TFHNTW
Trigger: CCAGGTGTTGTGAAATGTCAAATGGAACAAGCGCTT...CACAAAGCTTAACTGGGCAAGAGCACATTCAGCAGTAATTCCCCCACTAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS TCA 90 bp CCTATGGCTATTTTGGCCTTTCTTGGCCATGATGGTGTGAACAGCTaGTCCATGCTTCTTCTGAACCCAGATGGAATAAAAAGTTCAATG +
Preference number: 5 (lower is better)
Translates to: PMAILAFLGHDGVNS*SMLLLNPDGIKSSM
Trigger: CATTGAACTTTTTATTCCATCTGGGTTCAGAAGAAGCATGGATCAGCTGTTCACACCATCATGGCCAAGAAAGGCCAAAATAGCCATAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTCTTCACGAATTTCACTaGGAGCACCACGCAGTAGGT +
Preference number: 5 (lower is better)
Translates to: FLLNSSFNANTMLPALVFLHEFH*EHHAVG
Trigger: ACCTACTGCGTGGTGCTCCAAGTGAAATTCGTGAAG...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTCATCTTGGGGACCTGTaGATCCTACACCTGCCATTA +
Preference number: 5 (lower is better)
Translates to: FLLNSSFNANTMLPALVFHLGDL*ILHLPL
Trigger: TAATGGCAGGTGTAGGATCAACAGGTCCCCAAGATG...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS TCA 90 bp ATTCTTCACGAATTTCACTTGGAGCACCACGCAGTAGGTAGTCTTTaGGTAACTGACAAGCTTTTGCCAAGTTTGGTTGTATCACTTCTG +
Preference number: 5 (lower is better)
Translates to: ILHEFHLEHHAVGSL*VTDKLLPSLVVSLL
Trigger: CAGAAGTGATACAACCAAACTTGGCAAAAGCTTGTCAGTTACTCAAAGACTACCTACTGCGTGGTGCTCCAAGTGAAATTCGTGAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGAAAGAAATTCATTCAGTaGAAGAAGTGCCCATGCCGA +
Preference number: 5 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGKKFIQ*KKCPCR
Trigger: TCGGCATGGGCACTTCTTCAACTGAATGAATTTCTT...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTCATCTTGGGGACCTGTaGATCCTACACCTGCCATTA +
Preference number: 5 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFHLGDL*ILHLPL
Trigger: TAATGGCAGGTGTAGGATCAACAGGTCCCCAAGATG...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTCTTAAGATGTCAGTTTaGAAGGGCTCAGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: FLLNSSFNANTMLPALVFLKMSV*KGSVSC
Trigger: GCAGCTGACTGAGCCCTTCAAAACTGACATCTTAAG...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTCTTAAGATGTCAGTTTaGAAGGGCTCAGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASLKMSV*KGSVSC
Trigger: GCAGCTGACTGAGCCCTTCAAAACTGACATCTTAAG...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGATTAAGAAATAGCCCTTaGGCCCACAGGATATACTGT +
Preference number: 5 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGLRNSP*AHRIYC
Trigger: ACAGTATATCCTGTGGGCCAAAGGGCTATTTCTTAA...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTAAGCGCTTGTTCCATTaGACATTTCACAACACCTGG +
Preference number: 5 (lower is better)
Translates to: FLLNSSFNANTMLPALVFKRLFH*TFHNTW
Trigger: CCAGGTGTTGTGAAATGTCAAATGGAACAAGCGCTT...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
CDS-3UTR CAA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGAATCAAGATGAAGCGCTaGTTCCATTTGACATTTCAC +
Preference number: 5 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGIKMKR*FHLTFH
Trigger: GTGAAATGTCAAATGGAACAAGCGCTTCATCTTGAT...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
CDS-3UTR CAA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAGTCCTATGGCTATTTaGGCCTTTCTTGGCCATGAT +
Preference number: 5 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASSPMAI*AFLGHD
Trigger: ATCATGGCCAAGAAAGGCCAAAATAGCCATAGGACT...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTAGTCCTATGGCTATTTaGGCCTTTCTTGGCCATGAT +
Preference number: 5 (lower is better)
Translates to: FLLNSSFNANTMLPALVFSPMAI*AFLGHD
Trigger: ATCATGGCCAAGAAAGGCCAAAATAGCCATAGGACT...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGATTATATCCTAGGTTTTaGGCACTAGTATCGCACATG +
Preference number: 5 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGLYPRF*ALVSHM
Trigger: CATGTGCGATACTAGTGCCAAAAACCTAGGATATAA...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGAAAGCTTTTGCCAAGTTaGGTTGTATCACTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGKLLPS*VVSLLK
Trigger: CTTCAGAAGTGATACAACCAAACTTGGCAAAAGCTT...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTCTTAAGATGTCAGTTTaGAAGGGCTCAGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFLKMSV*KGSVSC
Trigger: GCAGCTGACTGAGCCCTTCAAAACTGACATCTTAAG...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTCTTGGTCACCCAATTTaGCCTGATTGTTGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: INFLVEQQLQCKHNASSILGHPI*PDCWAW
Trigger: CCAAGCCCAACAATCAGGCAAAATTGGGTGACCAAG...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616709.4
CDS-3UTR CAA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTAAGCGCTTGTTCCATTaGACATTTCACAACACCTGG +
Preference number: 5 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFKRLFH*TFHNTW
Trigger: CCAGGTGTTGTGAAATGTCAAATGGAACAAGCGCTT...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
CDS-3UTR CAA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAGAAATTCATTCAGTaGAAGAAGTGCCCATGCCGA +
Preference number: 5 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASKKFIQ*KKCPCR
Trigger: TCGGCATGGGCACTTCTTCAACTGAATGAATTTCTT...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp AGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAAAGGGCAGGACAGAATCCCATTAATTaGGGGGTATGTTCTTTATCT +
Preference number: 5 (lower is better)
Translates to: SYTMNVLRRCNRASKRAGQNPIN*GVCSLS
Trigger: AGATAAAGAACATACCCCCAAATTAATGGGATTCTG...TCCTGCCCTTTTAGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTAGTCCTATGGCTATTTaGGCCTTTCTTGGCCATGAT +
Preference number: 5 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFSPMAI*AFLGHD
Trigger: ATCATGGCCAAGAAAGGCCAAAATAGCCATAGGACT...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTTTAAGAAATAGCCCTTaGGCCCACAGGATATACTGT +
Preference number: 5 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASLRNSP*AHRIYC
Trigger: ACAGTATATCCTGTGGGCCAAAGGGCTATTTCTTAA...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTTCAATAACTCCAGTCTaGTACTTGTCACACTGGAGG +
Preference number: 5 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFSITPV*YLSHWR
Trigger: CCTCCAGTGTGACAAGTACAAGACTGGAGTTATTGA...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613902.4
CDS-3UTR CAA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTAAGCGCTTGTTCCATTaGACATTTCACAACACCTGG +
Preference number: 5 (lower is better)
Translates to: INFLVEQQLQCKHNASSIKRLFH*TFHNTW
Trigger: CCAGGTGTTGTGAAATGTCAAATGGAACAAGCGCTT...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
CDS-3UTR CAA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTAAGAAATTCATTCAGTaGAAGAAGTGCCCATGCCGA +
Preference number: 5 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFKKFIQ*KKCPCR
Trigger: TCGGCATGGGCACTTCTTCAACTGAATGAATTTCTT...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTTTATATCCTAGGTTTTaGGCACTAGTATCGCACATG +
Preference number: 5 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASLYPRF*ALVSHM
Trigger: CATGTGCGATACTAGTGCCAAAAACCTAGGATATAA...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTAAGCTTTTGCCAAGTTaGGTTGTATCACTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: FLLNSSFNANTMLPALVFKLLPS*VVSLLK
Trigger: CTTCAGAAGTGATACAACCAAACTTGGCAAAAGCTT...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTAAGCTTTTGCCAAGTTaGGTTGTATCACTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASKLLPS*VVSLLK
Trigger: CTTCAGAAGTGATACAACCAAACTTGGCAAAAGCTT...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTGTAACTGACAAGCTTTaGCCAAGTTTGGTTGTATCA +
Preference number: 5 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASVTDKL*PSLVVS
Trigger: TGATACAACCAAACTTGGCAAAAGCTTGTCAGTTAC...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTGTAACTGACAAGCTTTaGCCAAGTTTGGTTGTATCA +
Preference number: 5 (lower is better)
Translates to: FLLNSSFNANTMLPALVFVTDKL*PSLVVS
Trigger: TGATACAACCAAACTTGGCAAAAGCTTGTCAGTTAC...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTTCTTTGCATATCAACTaGCAAAGTGTAAAGCTGCAC +
Preference number: 5 (lower is better)
Translates to: FLLNSSFNANTMLPALVFSLHIN*QSVKLH
Trigger: GTGCAGCTTTACACTTTGCAAGTTGATATGCAAAGA...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613047.4
CDS-3UTR CAA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTGGCTTTATGTTCCTCTaGTTCAGCGAACCAAATGTT +
Preference number: 5 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFGFMFL*FSEPNV
Trigger: AACATTTGGTTCGCTGAACAAGAGGAACATAAAGCC...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613047.4
CDS-3UTR CAA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTAAGAAATTCATTCAGTaGAAGAAGTGCCCATGCCGA +
Preference number: 5 (lower is better)
Translates to: INFLVEQQLQCKHNASSIKKFIQ*KKCPCR
Trigger: TCGGCATGGGCACTTCTTCAACTGAATGAATTTCTT...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp GTCAGTCAAAATAGTTACACAATGAATGTACTTCGGAGATGTAACAGGGCTTCTGGTATGTTCTTTATCTaGAAGTATCACCATGAGAAG +
Preference number: 5 (lower is better)
Translates to: VSQNSYTMNVLRRCNRASGMFFI*KYHHEK
Trigger: CTTCTCATGGTGATACTTCAAGATAAAGAACATACC...AGAAGCCCTGTTACATCTCCGAAGTACATTCATTGTGTAACTATTTTGACTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp TTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATTTCAGAATCCCATTAATTaGGGGGTATGTTCTTTATCT +
Preference number: 5 (lower is better)
Translates to: FLLNSSFNANTMLPALVFQNPIN*GVCSLS
Trigger: AGATAAAGAACATACCCCCAAATTAATGGGATTCTG...AAATACCAATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTTTATATCCTAGGTTTTaGGCACTAGTATCGCACATG +
Preference number: 5 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFLYPRF*ALVSHM
Trigger: CATGTGCGATACTAGTGCCAAAAACCTAGGATATAA...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTTTAAGAAATAGCCCTTaGGCCCACAGGATATACTGT +
Preference number: 5 (lower is better)
Translates to: INFLVEQQLQCKHNASSILRNSP*AHRIYC
Trigger: ACAGTATATCCTGTGGGCCAAAGGGCTATTTCTTAA...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTGGTATGTTCTTTATCTaGAAGTATCACCATGAGAAG +
Preference number: 5 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFGMFFI*KYHHEK
Trigger: CTTCTCATGGTGATACTTCAAGATAAAGAACATACC...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTTTATATCCTAGGTTTTaGGCACTAGTATCGCACATG +
Preference number: 5 (lower is better)
Translates to: INFLVEQQLQCKHNASSILYPRF*ALVSHM
Trigger: CATGTGCGATACTAGTGCCAAAAACCTAGGATATAA...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGTAACTGACAAGCTTTaGCCAAGTTTGGTTGTATCA +
Preference number: 5 (lower is better)
Translates to: INFLVEQQLQCKHNASSIVTDKL*PSLVVS
Trigger: TGATACAACCAAACTTGGCAAAAGCTTGTCAGTTAC...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp CATAGTTCAAAATCAGGATATGTGGATCTTGATTGGGCCTTAAGATGTCAGTTTTCCAGCATTGGTATTTaGGCTAAGGTAAATCTACAA +
Preference number: 5 (lower is better)
Translates to: HSSKSGYVDLDWALRCQFSSIGI*AKVNLQ
Trigger: TTGTAGATTTACCTTAGCCAAAATACCAATGCTGGA...AAACTGACATCTTAAGGCCCAATCAAGATCCACATATCCTGATTTTGAACTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTGGTATGTTCTTTATCTaGAAGTATCACCATGAGAAG +
Preference number: 5 (lower is better)
Translates to: INFLVEQQLQCKHNASSIGMFFI*KYHHEK
Trigger: CTTCTCATGGTGATACTTCAAGATAAAGAACATACC...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTCAGAATCCCATTAATTaGGGGGTATGTTCTTTATCT +
Preference number: 5 (lower is better)
Translates to: INFLVEQQLQCKHNASSIQNPIN*GVCSLS
Trigger: AGATAAAGAACATACCCCCAAATTAATGGGATTCTG...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS-3UTR CAA 90 bp ATAAATTTTCTTGTTGAACAGCAGCTTCAATGCAAACACAATGCTTCCAGCATTTCCAGCATTGGTATTTaGGCTAAGGTAAATCTACAA +
Preference number: 5 (lower is better)
Translates to: INFLVEQQLQCKHNASSISSIGI*AKVNLQ
Trigger: TTGTAGATTTACCTTAGCCAAAATACCAATGCTGGA...AATGCTGGAAGCATTGTGTTTGCATTGAAGCTGCTGTTCAACAAGAAAATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS CCA 72 bp AGTGCCCATGCCGACTTTGCTTCTCCCAAGGAAACCTaGCCATCTTTGTCTCCATCAGCCACCGTCAAGATG +
Preference number: 6 (lower is better)
Translates to: SAHADFASPKET*PSLSPSATVKM
Trigger: CATCTTGACGGTGGCTGATGGAGACAAAGATGGCCAGGTTTCCTTGGGAGAAGCAAAGTCGGCATGGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS GCA 72 bp CCGACGTTTGGCATCACTGATTGCTGTCTGGAGCAGTaGTTCGCAAAAGTTTGGCACAATTACCGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: PTFGITDCCLEQ*FAKVWHNYRCW
Trigger: CCAGCACCGGTAATTGTGCCAAACTTTTGCGAAGCACTGCTCCAGACAGCAATCAGTGATGCCAAACGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS CCA 72 bp ACTGATTGCTGTCTGGAGCAGTGCTTCGCAAAAGTTTaGCACAATTACCGGTGCTGGTCCTTAAAGAGACTA +
Preference number: 6 (lower is better)
Translates to: TDCCLEQCFAKV*HNYRCWSLKRL
Trigger: TAGTCTCTTTAAGGACCAGCACCGGTAATTGTGCCAAACTTTTGCGAAGCACTGCTCCAGACAGCAATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615519.4
CDS CAA 72 bp CGTCAAGATGAGATTAACCAGTTCAGAGAGGTTTCCTaGGTCACCCAATTTTGCCTGATTGTTGGGCTTGGT +
Preference number: 6 (lower is better)
Translates to: RQDEINQFREVS*VTQFCLIVGLG
Trigger: ACCAAGCCCAACAATCAGGCAAAATTGGGTGACCAAGGAAACCTCTCTGAACTGGTTAATCTCATCTTGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616709.4
CDS TCA 72 bp ATTTTGGCCTTTCTTGGCCATGATGGTGTGAACAGCTaGTCCATGCTTCTTCTGAACCCAGATGGAATAAAA +
Preference number: 6 (lower is better)
Translates to: ILAFLGHDGVNS*SMLLLNPDGIK
Trigger: TTTTATTCCATCTGGGTTCAGAAGAAGCATGGATCAGCTGTTCACACCATCATGGCCAAGAAAGGCCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS TCA 72 bp GAATTTCACTTGGAGCACCACGCAGTAGGTAGTCTTTaGGTAACTGACAAGCTTTTGCCAAGTTTGGTTGTA +
Preference number: 6 (lower is better)
Translates to: EFHLEHHAVGSL*VTDKLLPSLVV
Trigger: TACAACCAAACTTGGCAAAAGCTTGTCAGTTACTCAAAGACTACCTACTGCGTGGTGCTCCAAGTGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4
CDS CAA 72 bp CGTCAAGATGAGATTAACCAGTTCAGAGAGGTTTCCTaGGTCACCCAATTTTGCCTTAAAGAGACTATAGAC +
Preference number: 6 (lower is better)
Translates to: RQDEINQFREVS*VTQFCLKETID
Trigger: GTCTATAGTCTCTTTAAGGCAAAATTGGGTGACCAAGGAAACCTCTCTGAACTGGTTAATCTCATCTTGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
CDS TCA 72 bp CTGACAAGCTTTTGCCAAGTTTGGTTGTATCACTTCTaGAGTACACTTCATTGTACTCTGATCACAGCTAGT +
Preference number: 6 (lower is better)
Translates to: LTSFCQVWLYHF*STLHCTLITAS
Trigger: ACTAGCTGTGATCAGAGTACAATGAAGTGTACTTCAGAAGTGATACAACCAAACTTGGCAAAAGCTTGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370310.5
ENST00000613047.4
ENST00000613902.4
ENST00000616709.4