RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DIP2C (Homo sapiens)

Ensembl gene IDs: ENSG00000151240

Ensembl transcript IDs: ENST00000280886.12, ENST00000381496.7, ENST00000421992.2, ENST00000434695.2, ENST00000634311.1

Found 772 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGCACTCGTCCACAGGCGGCAAACGACGCAGCTGGAGGACTTCTTaGTTCAGCCGGAGCTCTGGCATGAACCCCCGGGGAACTGTGCTC +
Preference number: 1 (lower is better)
Translates to: AHSSTGGKRRSWRTS*FSRSSGMNPRGTVL
Trigger: GAGCACAGTTCCCCGGGGGTTCATGCCAGAGCTCCGGCTGAAGCAAGAAGTCCTCCAGCTGCGTCGTTTGCCGCCTGTGGACGAGTGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR CCA 90 bp GCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGCTaGAGGACTTCTTGCTTCAGCCGGAGCTCTGGCATGAACCCCCGG +
Preference number: 1 (lower is better)
Translates to: AETGAHSSTGGKRRS*RTSCFSRSSGMNPR
Trigger: CCGGGGGTTCATGCCAGAGCTCCGGCTGAAGCAAGAAGTCCTCCAGCTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR CCA 90 bp ACGGCGCACATTCATTCAATATCCACCACGTGTCAGGCCCCGCCCTaGTGCCGAGGTAAGGACGGTGGCACGCTTCAGAAGCCTTGTGGA +
Preference number: 1 (lower is better)
Translates to: TAHIHSISTTCQAPP*CRGKDGGTLQKPCG
Trigger: TCCACAAGGCTTCTGAAGCGTGCCACCGTCCTTACCTCGGCACCAGGGCGGGGCCTGACACGTGGTGGATATTGAATGAATGTGCGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434695.2
3UTR TCA 90 bp ACACAGAGCGGGCTGGGTCTTAAGACGAGGGGACGATCACCGATGTaGGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGG +
Preference number: 1 (lower is better)
Translates to: TQSGLGLKTRGRSPM*VPDTLSTPHWPSEG
Trigger: CCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACATCGGTGATCGTCCCCTCGTCTTAAGACCCAGCCCGCTCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR GCA 90 bp GCGCACATTCATTCAATATCCACCACGTGTCAGGCCCCGCCCTGGTaGCGAGGTAAGGACGGTGGCACGCTTCAGAAGCCTTGTGGAAAA +
Preference number: 1 (lower is better)
Translates to: AHIHSISTTCQAPPW*RGKDGGTLQKPCGK
Trigger: TTTTCCACAAGGCTTCTGAAGCGTGCCACCGTCCTTACCTCGGCACCAGGGCGGGGCCTGACACGTGGTGGATATTGAATGAATGTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434695.2
3UTR TCA 90 bp CCTCCTCTTCCTCCTCCACTCTCACCACAAATGGCTGTATTCTGGTaGGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACA +
Preference number: 1 (lower is better)
Translates to: PPLPPPLSPQMAVFW*VLPCVCTLQWTRRT
Trigger: TGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTCACCAGAATACAGCCATTTGTGGTGAGAGTGGAGGAGGAAGAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR TCA 90 bp CTGTCCTGCACACTGCAGCTAATGTTTCATAGTCAGTGCCTGGCCTaGAGCCCCAAACCTACCTCCCTTTCAACAAGGTGGGTGGGTGTA +
Preference number: 1 (lower is better)
Translates to: LSCTLQLMFHSQCLA*SPKPTSLSTRWVGV
Trigger: TACACCCACCCACCTTGTTGAAAGGGAGGTAGGTTTGGGGCTTCAGGCCAGGCACTGACTATGAAACATTAGCTGCAGTGTGCAGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR CCA 90 bp GAAGTCCTCTTCCTCCTCCTCTTCCTCCTCCACTCTCACCACAAATaGCTGTATTCTGGTGAGTGTTGCCCTGTGTCTGCACGCTTCAGT +
Preference number: 1 (lower is better)
Translates to: EVLFLLLFLLHSHHK*LYSGECCPVSARFS
Trigger: ACTGAAGCGTGCAGACACAGGGCAACACTCACCAGAATACAGCCATTTGTGGTGAGAGTGGAGGAGGAAGAGGAGGAGGAAGAGGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR CCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTaGGGCAGTTACAGAACACATCTTTCTCGGAGTGCAGATGCTCCT +
Preference number: 1 (lower is better)
Translates to: LSHAYLAPRATAGSH*GSYRTHLSRSADAP
Trigger: AGGAGCATCTGCACTCCGAGAAAGATGTGTTCTGTAACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR GCA 90 bp AAATTCAGTGGTAAATTCACATTTCACCCCCATGCCAATCGTGGCTaGTGTGAGAAGTCCTCTTCCTCCTCCTCTTCCTCCTCCACTCTC +
Preference number: 1 (lower is better)
Translates to: KFSGKFTFHPHANRG*CEKSSSSSSSSSTL
Trigger: GAGAGTGGAGGAGGAAGAGGAGGAGGAAGAGGACTTCTCACAGCAGCCACGATTGGCATGGGGGTGAAATGTGAATTTACCACTGAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR GCA 90 bp GTCACACTGGGGCAGTTACAGAACACATCTTTCTCGGAGTGCAGATaGTCCTTCTTGGTTGGACACCGTGGGCCAATTCAATTTAGAAGT +
Preference number: 1 (lower is better)
Translates to: VTLGQLQNTSFSECR*SFLVGHRGPIQFRS
Trigger: ACTTCTAAATTGAATTGGCCCACGGTGTCCAACCAAGAAGGAGCATCTGCACTCCGAGAAAGATGTGTTCTGTAACTGCCCCAGTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR GCA 90 bp CTGCACAAGAACATATTGCCATTTCCTATTAAGAATACAGAACCGTaGTCAACACTCCCACGGCGCACATTCATTCAATATCCACCACGT +
Preference number: 1 (lower is better)
Translates to: LHKNILPFPIKNTEP*STLPRRTFIQYPPR
Trigger: ACGTGGTGGATATTGAATGAATGTGCGCCGTGGGAGTGTTGAGCACGGTTCTGTATTCTTAATAGGAAATGGCAATATGTTCTTGTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434695.2
3UTR CCA 90 bp ATGTTTGAAGTGACATCTACATTTGTTTTGCTTCCTGACTTCAGCTaGACCTCAAAGCTGTCCTGCACACTGCAGCTAATGTTTCATAGT +
Preference number: 1 (lower is better)
Translates to: MFEVTSTFVLLPDFS*TSKLSCTLQLMFHS
Trigger: ACTATGAAACATTAGCTGCAGTGTGCAGGACAGCTTTGAGGTCCAGCTGAAGTCAGGAAGCAAAACAAATGTAGATGTCACTTCAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR GCA 90 bp TTTAGCGGTCATATTGACAGAATTGTCTTCTGCACAAGAACATATTaGCATTTCCTATTAAGAATACAGAACCGTGCTCAACACTCCCAC +
Preference number: 1 (lower is better)
Translates to: FSGHIDRIVFCTRTY*HFLLRIQNRAQHSH
Trigger: GTGGGAGTGTTGAGCACGGTTCTGTATTCTTAATAGGAAATGGCAATATGTTCTTGTGCAGAAGACAATTCTGTCAATATGACCGCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434695.2
3UTR GCA 90 bp GTATACCAGCCTTTGTTTCTTCAGCACATTTCTGACAAAGAAAGCTaGTATTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTA +
Preference number: 1 (lower is better)
Translates to: VYQPLFLQHISDKES*YYLIGRCYLEGFLV
Trigger: TACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAATAGCAGCTTTCTTTGTCAGAAATGTGCTGAAGAAACAAAGGCTGGTATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR CCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTaGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACATAAAA +
Preference number: 1 (lower is better)
Translates to: HLNIKQALSQMYKAY*WFNIQEGCCPLHIK
Trigger: TTTTATGTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGCTTCAGCCGGAGCTCTaGCATGAACCCCCGGGGAAC +
Preference number: 2 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQLQPEL*HEPPGN
Trigger: GTTCCCCGGGGGTTCATGCCAGAGCTCCGGCTGAAG...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR CAA 90 bp GGCGCACTCGTCCACAGGCGGCAAACGACGCAGCTGGAGGACTTCTaGCTTCAGCCGGAGCTCTGGCATGAACCCCCGGGGAACTGTGCT +
Preference number: 2 (lower is better)
Translates to: GALVHRRQTTQLEDF*LQPELWHEPPGNCA
Trigger: AGCACAGTTCCCCGGGGGTTCATGCCAGAGCTCCGGCTGAAGCAAGAAGTCCTCCAGCTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR TCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGCAATCGTGGCTGCTGTaGGAAGTCCTCTTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQQSWLL*EVLFLL
Trigger: GAGGAGGAAGAGGACTTCTCACAGCAGCCACGATTG...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGCAGAGGGGGAATCAATaGAACCCAGTGCGAATGACC +
Preference number: 2 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQQRGNQ*NPVRMT
Trigger: GGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTG...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTGTGTTGCCCTGTGTCTaGACGCTTCAGTGGACACGG +
Preference number: 2 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSVLPCV*TLQWTR
Trigger: CCGTGTCCACTGAAGCGTGCAGACACAGGGCAACAC...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR TCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGGTGCACATTGAGCTTTaGATTCTTTTGCCATCCTTG +
Preference number: 2 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQVHIEL*ILLPSL
Trigger: CAAGGATGGCAAAAGAATTCAAAGCTCAATGTGCAC...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR TCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTGGACGATCACCGATGTaGGTTCCGGACACTTTGTCC +
Preference number: 2 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSGRSPM*VPDTLS
Trigger: GGACAAAGTGTCCGGAACTCACATCGGTGATCGTCC...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGAGGGCTCCTGCGGTCTaGGACTGCTGGCAACAGCAG +
Preference number: 2 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESRAPAV*DCWQQQ
Trigger: CTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCT...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGAGGGCTCCTGCGGTCTaGGACTGCTGGCAACAGCAG +
Preference number: 2 (lower is better)
Translates to: LTALTTALQRPHSLNVELRAPAV*DCWQQQ
Trigger: CTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCT...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGTTGGAAGGTGCTATTTaGAAGGTTTTCTCGTACCTC +
Preference number: 2 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQLEGAI*KVFSYL
Trigger: GAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAA...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGCTTCAGCCGGAGCTCTaGCATGAACCCCCGGGGAAC +
Preference number: 2 (lower is better)
Translates to: LTALTTALQRPHSLNVELLQPEL*HEPPGN
Trigger: GTTCCCCGGGGGTTCATGCCAGAGCTCCGGCTGAAG...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp GCGCACATTCATTCAATATCCACCACGTGTCAGGCCCCGCCCTGGTGCCGAGGTGCTTCAGAAGCCTTGTaGAAAACACCAGCACGCCAA +
Preference number: 2 (lower is better)
Translates to: AHIHSISTTCQAPPWCRGASEAL*KTPARQ
Trigger: TTGGCGTGCTGGTGTTTTCCACAAGGCTTCTGAAGC...ACCTCGGCACCAGGGCGGGGCCTGACACGTGGTGGATATTGAATGAATGTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434695.2
3UTR-3UTR GCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCTTTAGACAGGGCTCCTaGGGTCTGCGACTGCTGGCA +
Preference number: 2 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCFRQGS*GLRLLA
Trigger: TGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAA...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGGTGTTGCCCTGTGTCTaGACGCTTCAGTGGACACGG +
Preference number: 2 (lower is better)
Translates to: LTALTTALQRPHSLNVELVLPCV*TLQWTR
Trigger: CCGTGTCCACTGAAGCGTGCAGACACAGGGCAACAC...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGCCTGCGGTCTGCGACTaGTGGCAACAGCAGAGTGTA +
Preference number: 2 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESPAVCD*WQQQSV
Trigger: TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGG...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTGTCTGCACGCTTCAGTaGACACGGAGAACAATGTCT +
Preference number: 2 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSVCTLQ*TRRTMS
Trigger: AGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGAC...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTTTGTCCACTCCACATTaGCCATCAGAGGGGGAATCA +
Preference number: 2 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSLSTPH*PSEGES
Trigger: TGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAA...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR TCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCTGCACAGGTGAGCTCTaGGAAGGTGTGGCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSCTGEL*EGVARS
Trigger: GCTCCTGGCCACACCTTCTCAGAGCTCACCTGTGCA...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGGGCAAACGACGCAGCTaGAGGACTTCTTGCTTCAGC +
Preference number: 2 (lower is better)
Translates to: LTALTTALQRPHSLNVELGKRRS*RTSCFS
Trigger: GCTGAAGCAAGAAGTCCTCCAGCTGCGTCGTTTGCC...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTACATCTTTCTCGGAGTaGAGATGCTCCTTCTTGGTT +
Preference number: 2 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSTSFSE*RCSFLV
Trigger: AACCAAGAAGGAGCATCTGCACTCCGAGAAAGATGT...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGTATTCTGGTGAGTGTTaGCCTGTGTCTGCACGCTTC +
Preference number: 2 (lower is better)
Translates to: LTALTTALQRPHSLNVELYSGEC*PVSARF
Trigger: GAAGCGTGCAGACACAGGGCAACACTCACCAGAATA...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGAGCACCGAGAGCCACTaGGGGGTCACACTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPSTESH*GVTLGQ
Trigger: CTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCT...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGGCGGTCTGCGACTGCTaGCAACAGCAGAGTGTATGT +
Preference number: 2 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLAVCDC*QQQSVC
Trigger: ACATACACTCTGCTGTTGCCAGCAGTCGCAGACCGC...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGTTGTCCACTCCACATTaGCCATCAGAGGGGGAATCA +
Preference number: 2 (lower is better)
Translates to: LTALTTALQRPHSLNVELLSTPH*PSEGES
Trigger: TGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAA...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGTTCATAGTCAGTGCCTaGCCTGAAGCCCCAAACCTA +
Preference number: 2 (lower is better)
Translates to: LTALTTALQRPHSLNVELFIVSA*PEAPNL
Trigger: TAGGTTTGGGGCTTCAGGCCAGGCACTGACTATGAA...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR CAA 90 bp GGGCAGTTACAGAACACATCTTTCTCGGAGTGCAGATGCTCCTTCTaGGTTGGACACCGTGGGCCAATTCAATTTAGAAGTGCACAGGTG +
Preference number: 2 (lower is better)
Translates to: GQLQNTSFSECRCSF*VGHRGPIQFRSAQV
Trigger: CACCTGTGCACTTCTAAATTGAATTGGCCCACGGTGTCCAACCAAGAAGGAGCATCTGCACTCCGAGAAAGATGTGTTCTGTAACTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGCATGCCAATCGTGGCTaGTGTGAGAAGTCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLHANRG*CEKSSS
Trigger: GGAAGAGGACTTCTCACAGCAGCCACGATTGGCATG...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTGGCAATAATTTCACTTaGTGGTCTCTGGTTCTAGAA +
Preference number: 2 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSGNNFT*WSLVLE
Trigger: TTCTAGAACCAGAGACCAGCAAGTGAAATTATTGCC...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGGAAAACAGTGCTATTTaGCAACCTAAAGCCCCTCAG +
Preference number: 2 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESENSAI*QPKAPQ
Trigger: CTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGGGCAGAGAAAGACGCTaGCCACAACATAATGAAAGA +
Preference number: 2 (lower is better)
Translates to: LTALTTALQRPHSLNVELGRERR*PQHNER
Trigger: TCTTTCATTATGTTGTGGGCAGCGTCTTTCTCTGCC...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACTCACACAGAGCGGGCTaGGTCTTAAGACGAGGGGAC +
Preference number: 2 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHSHRAG*VLRRGD
Trigger: GTCCCCTCGTCTTAAGACCCAGCCCGCTCTGTGTGA...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR TCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGGTGCACATTGAGCTTTaGATTCTTTTGCCATCCTTG +
Preference number: 2 (lower is better)
Translates to: LTALTTALQRPHSLNVELVHIEL*ILLPSL
Trigger: CAAGGATGGCAAAAGAATTCAAAGCTCAATGTGCAC...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCTTTAGACAGGGCTCCTaGGGTCTGCGACTGCTGGCA +
Preference number: 2 (lower is better)
Translates to: ALNSFAILEMAIISLAGLFRQGS*GLRLLA
Trigger: TGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAA...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR TCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCTCTTCAGCACATTTCTaGCAAAGAAAGCTGCTATTA +
Preference number: 2 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCSSAHF*QRKLLL
Trigger: TAATAGCAGCTTTCTTTGTCAGAAATGTGCTGAAGA...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR TCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACGCAACCCAGTGCGAATaGCCACAGAATCGCATTCCT +
Preference number: 2 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHATQCE*PQNRIP
Trigger: AGGAATGCGATTCTGTGGTCATTCGCACTGGGTTGC...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCGAAAACAGTGCTATTTaGCAACCTAAAGCCCCTCAG +
Preference number: 2 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSENSAI*QPKAPQ
Trigger: CTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGCACTCTCACCACAAATaGCTGTATTCTGGTGAGTGT +
Preference number: 2 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLHSHHK*LYSGEC
Trigger: ACACTCACCAGAATACAGCCATTTGTGGTGAGAGTG...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTTCACACAGAGCGGGCTaGGTCTTAAGACGAGGGGAC +
Preference number: 2 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFSHRAG*VLRRGD
Trigger: GTCCCCTCGTCTTAAGACCCAGCCCGCTCTGTGTGA...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCGGCAAACGACGCAGCTaGAGGACTTCTTGCTTCAGC +
Preference number: 2 (lower is better)
Translates to: CPQHNERSSTFCPASILVGKRRS*RTSCFS
Trigger: GCTGAAGCAAGAAGTCCTCCAGCTGCGTCGTTTGCC...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACATGCTCCTTCTTGGTTaGACACCGTGGGCCAATTCA +
Preference number: 2 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHMLLLG*TPWANS
Trigger: TGAATTGGCCCACGGTGTCCAACCAAGAAGGAGCAT...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACTTCATAGTCAGTGCCTaGCCTGAAGCCCCAAACCTA +
Preference number: 2 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHFIVSA*PEAPNL
Trigger: TAGGTTTGGGGCTTCAGGCCAGGCACTGACTATGAA...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR TCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTCAATCGTGGCTGCTGTaGGAAGTCCTCTTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPQSWLL*EVLFLL
Trigger: GAGGAGGAAGAGGACTTCTCACAGCAGCCACGATTG...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGAGGGACCATCTCCCTTaGGTAAAGTGTCAAGCAGGA +
Preference number: 2 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPRDHLP*VKCQAG
Trigger: TCCTGCTTGACACTTTACCCAAGGGAGATGGTCCCT...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR TCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTATGGCTGTATTCTGGTaGGTGTTGCCCTGTGTCTGC +
Preference number: 2 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFMAVFW*VLPCVC
Trigger: GCAGACACAGGGCAACACTCACCAGAATACAGCCAT...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR TCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCGTAGAGTTGATCTGGTaGCAGTTGAAATTATGTTTG +
Preference number: 2 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSVELIW*QLKLCL
Trigger: CAAACATAATTTCAACTGTCACCAGATCAACTCTAC...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACGGCAGAGAAAGACGCTaGCCACAACATAATGAAAGA +
Preference number: 2 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHGRERR*PQHNER
Trigger: TCTTTCATTATGTTGTGGGCAGCGTCTTTCTCTGCC...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTTATTCTGGTGAGTGTTaGCCTGTGTCTGCACGCTTC +
Preference number: 2 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFYSGEC*PVSARF
Trigger: GAAGCGTGCAGACACAGGGCAACACTCACCAGAATA...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACAATGGTTTGTGGAGATaGAAGGATGCACCACATATG +
Preference number: 2 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHNGLWR*KDAPHM
Trigger: CATATGTGGTGCATCCTTCCATCTCCACAAACCATT...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACGAATCAAATGGTTTGTaGAGATGGAAGGATGCACCA +
Preference number: 2 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHESNGL*RWKDAP
Trigger: TGGTGCATCCTTCCATCTCCACAAACCATTTGATTC...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGTCCCTTTCAACAAGGTaGGTGGGTGTAGGAAAATGT +
Preference number: 2 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPSLSTR*VGVGKC
Trigger: ACATTTTCCTACACCCACCCACCTTGTTGAAAGGGA...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTAGGGACCATCTCCCTTaGGTAAAGTGTCAAGCAGGA +
Preference number: 2 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFRDHLP*VKCQAG
Trigger: TCCTGCTTGACACTTTACCCAAGGGAGATGGTCCCT...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCACATCTTTCTCGGAGTaGAGATGCTCCTTCTTGGTT +
Preference number: 2 (lower is better)
Translates to: CPQHNERSSTFCPASILVTSFSE*RCSFLV
Trigger: AACCAAGAAGGAGCATCTGCACTCCGAGAAAGATGT...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCCACTCTCACCACAAATaGCTGTATTCTGGTGAGTGT +
Preference number: 2 (lower is better)
Translates to: CPQHNERSSTFCPASILVHSHHK*LYSGEC
Trigger: ACACTCACCAGAATACAGCCATTTGTGGTGAGAGTG...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACCTGCTATTATCTAATTaGAAGGTGCTATTTGGAAGG +
Preference number: 2 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHLLLSN*KVLFGR
Trigger: CCTTCCAAATAGCACCTTCCAATTAGATAATAGCAG...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGTATCTAATTGGAAGGTaGTATTTGGAAGGTTTTCTC +
Preference number: 2 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPYLIGR*YLEGFL
Trigger: GAGAAAACCTTCCAAATAGCACCTTCCAATTAGATA...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR GCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTCATCTACATTTGTTTTaGTTCCTGACTTCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFHLHLF*FLTSAG
Trigger: TCCAGCTGAAGTCAGGAAGCAAAACAAATGTAGATG...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGATGTACAAAGCGTACTaGTGGTTTAACATACAAGAA +
Preference number: 2 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPMYKAY*WFNIQE
Trigger: TTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR CAA 90 bp ATTTCTTCTCATTCTATACTAACTTCGAAGGCCGTATACCAGCCTTaGTTTCTTCAGCACATTTCTGACAAAGAAAGCTGCTATTATCTA +
Preference number: 2 (lower is better)
Translates to: ISSHSILTSKAVYQP*FLQHISDKESCYYL
Trigger: TAGATAATAGCAGCTTTCTTTGTCAGAAATGTGCTGAAGAAACAAAGGCTGGTATACGGCCTTCGAAGTTAGTATAGAATGAGAAGAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR TCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTTCTTCAGCACATTTCTaGCAAAGAAAGCTGCTATTA +
Preference number: 2 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFSSAHF*QRKLLL
Trigger: TAATAGCAGCTTTCTTTGTCAGAAATGTGCTGAAGA...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTATTTCAAGAATCAAATaGTTTGTGGAGATGGAAGGA +
Preference number: 2 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFISRIK*FVEMEG
Trigger: TCCTTCCATCTCCACAAACCATTTGATTCTTGAAAT...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR CCA 72 bp GGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGCTaGAGGACTTCTTGCTTCAGCCGGAGCTCTGGCATG +
Preference number: 3 (lower is better)
Translates to: GAHSSTGGKRRS*RTSCFSRSSGM
Trigger: CATGCCAGAGCTCCGGCTGAAGCAAGAAGTCCTCCAGCTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR GCA 72 bp TCCACAGGCGGCAAACGACGCAGCTGGAGGACTTCTTaGTTCAGCCGGAGCTCTGGCATGAACCCCCGGGGA +
Preference number: 3 (lower is better)
Translates to: STGGKRRSWRTS*FSRSSGMNPRG
Trigger: TCCCCGGGGGTTCATGCCAGAGCTCCGGCTGAAGCAAGAAGTCCTCCAGCTGCGTCGTTTGCCGCCTGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR TCA 72 bp GCTGGAGGACTTCTTGCTTCAGCCGGAGCTCTGGCATaGACCCCCGGGGAACTGTGCTCACTGAGCGAGGGA +
Preference number: 3 (lower is better)
Translates to: AGGLLASAGALA*TPGELCSLSEG
Trigger: TCCCTCGCTCAGTGAGCACAGTTCCCCGGGGGTTCATGCCAGAGCTCCGGCTGAAGCAAGAAGTCCTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR GCA 72 bp CATTCAATATCCACCACGTGTCAGGCCCCGCCCTGGTaGCGAGGTAAGGACGGTGGCACGCTTCAGAAGCCT +
Preference number: 3 (lower is better)
Translates to: HSISTTCQAPPW*RGKDGGTLQKP
Trigger: AGGCTTCTGAAGCGTGCCACCGTCCTTACCTCGGCACCAGGGCGGGGCCTGACACGTGGTGGATATTGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434695.2
3UTR-3UTR CAA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTTGCAGATGCTCCTTCTaGGTTGGACACCGTGGGCCA +
Preference number: 3 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSCRCSF*VGHRGP
Trigger: TGGCCCACGGTGTCCAACCAAGAAGGAGCATCTGCA...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR CCA 72 bp ATTCATTCAATATCCACCACGTGTCAGGCCCCGCCCTaGTGCCGAGGTAAGGACGGTGGCACGCTTCAGAAG +
Preference number: 3 (lower is better)
Translates to: IHSISTTCQAPP*CRGKDGGTLQK
Trigger: CTTCTGAAGCGTGCCACCGTCCTTACCTCGGCACCAGGGCGGGGCCTGACACGTGGTGGATATTGAATGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434695.2
3UTR-3UTR CAA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTGATGCTCCTTCTTGGTaGGACACCGTGGGCCAATTC +
Preference number: 3 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSDAPSW*DTVGQF
Trigger: GAATTGGCCCACGGTGTCCAACCAAGAAGGAGCATC...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR TCA 72 bp GGGCTGGGTCTTAAGACGAGGGGACGATCACCGATGTaGGTTCCGGACACTTTGTCCACTCCACATTGGCCA +
Preference number: 3 (lower is better)
Translates to: GLGLKTRGRSPM*VPDTLSTPHWP
Trigger: TGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACATCGGTGATCGTCCCCTCGTCTTAAGACCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CAA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGTTGTGCAATGAATTCTaGCAGCTAAGAAAACAGTGC +
Preference number: 3 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQLCNEF*QLRKQC
Trigger: GCACTGTTTTCTTAGCTGCAAGAATTCATTGCACAA...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR TCA 72 bp CCTCCTCCACTCTCACCACAAATGGCTGTATTCTGGTaGGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACA +
Preference number: 3 (lower is better)
Translates to: PPPLSPQMAVFW*VLPCVCTLQWT
Trigger: TGTCCACTGAAGCGTGCAGACACAGGGCAACACTCACCAGAATACAGCCATTTGTGGTGAGAGTGGAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR TCA 72 bp ATTCACATTTCACCCCCATGCCAATCGTGGCTGCTGTaGGAAGTCCTCTTCCTCCTCCTCTTCCTCCTCCAC +
Preference number: 3 (lower is better)
Translates to: IHISPPCQSWLL*EVLFLLLFLLH
Trigger: GTGGAGGAGGAAGAGGAGGAGGAAGAGGACTTCTCACAGCAGCCACGATTGGCATGGGGGTGAAATGTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR GCA 72 bp TGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATaGAACCCAGTGCGAATGACCACAGAATCGCATTCC +
Preference number: 3 (lower is better)
Translates to: CPLHIGHQRGNQ*NPVRMTTESHS
Trigger: GGAATGCGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CAA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTATTGGAAGGTGCTATTaGGAAGGTTTTCTCGTACCT +
Preference number: 3 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSIGRCY*EGFLVP
Trigger: AGGTACGAGAAAACCTTCCAAATAGCACCTTCCAAT...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR TCA 72 bp GCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATaGCCACAGAATCGCATTCCTTTTCGTAGCAAGGAC +
Preference number: 3 (lower is better)
Translates to: AIRGGINATQCE*PQNRIPFRSKD
Trigger: GTCCTTGCTACGAAAAGGAATGCGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR TCA 72 bp ACACTGCAGCTAATGTTTCATAGTCAGTGCCTGGCCTaGAGCCCCAAACCTACCTCCCTTTCAACAAGGTGG +
Preference number: 3 (lower is better)
Translates to: TLQLMFHSQCLA*SPKPTSLSTRW
Trigger: CCACCTTGTTGAAAGGGAGGTAGGTTTGGGGCTTCAGGCCAGGCACTGACTATGAAACATTAGCTGCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR GCA 72 bp TCTCTGGTTCTAGAAGAAACTTTTAGACAGGGCTCCTaGGGTCTGCGACTGCTGGCAACAGCAGAGTGTATG +
Preference number: 3 (lower is better)
Translates to: SLVLEETFRQGS*GLRLLATAECM
Trigger: CATACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTTCTTCTAGAACCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CAA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCGCCGTATACCAGCCTTaGTTTCTTCAGCACATTTCT +
Preference number: 3 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCAVYQP*FLQHIS
Trigger: AGAAATGTGCTGAAGAAACAAAGGCTGGTATACGGC...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR GCA 72 bp TTGCTTCCTGACTTCAGCTGGACCTCAAAGCTGTCCTaGACACTGCAGCTAATGTTTCATAGTCAGTGCCTG +
Preference number: 3 (lower is better)
Translates to: LLPDFSWTSKLS*TLQLMFHSQCL
Trigger: CAGGCACTGACTATGAAACATTAGCTGCAGTGTGCAGGACAGCTTTGAGGTCCAGCTGAAGTCAGGAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CAA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGATTGGAAGGTGCTATTaGGAAGGTTTTCTCGTACCT +
Preference number: 3 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLIGRCY*EGFLVP
Trigger: AGGTACGAGAAAACCTTCCAAATAGCACCTTCCAAT...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CAA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCGATGCTCCTTCTTGGTaGGACACCGTGGGCCAATTC +
Preference number: 3 (lower is better)
Translates to: CPQHNERSSTFCPASILVDAPSW*DTVGQF
Trigger: GAATTGGCCCACGGTGTCCAACCAAGAAGGAGCATC...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CAA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGAAGATCATCTACATTTaGCCCAGCATCAATCTTAGT +
Preference number: 3 (lower is better)
Translates to: LTALTTALQRPHSLNVELKIIYI*PSINLS
Trigger: ACTAAGATTGATGCTGGGCAAAATGTAGATGATCTT...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CAA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCAAGATCATCTACATTTaGCCCAGCATCAATCTTAGT +
Preference number: 3 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSKIIYI*PSINLS
Trigger: ACTAAGATTGATGCTGGGCAAAATGTAGATGATCTT...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR CCA 72 bp AAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTaGTTTAACATACAAGAAGGTTGCTGTCCTTTGCAC +
Preference number: 3 (lower is better)
Translates to: KQALSQMYKAYW*FNIQEGCCPLH
Trigger: GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR-3UTR CAA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCGCCGTATACCAGCCTTaGTTTCTTCAGCACATTTCT +
Preference number: 3 (lower is better)
Translates to: CPQHNERSSTFCPASILVAVYQP*FLQHIS
Trigger: AGAAATGTGCTGAAGAAACAAAGGCTGGTATACGGC...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR GCA 72 bp AACATATTGCCATTTCCTATTAAGAATACAGAACCGTaGTCAACACTCCCACGGCGCACATTCATTCAATAT +
Preference number: 3 (lower is better)
Translates to: NILPFPIKNTEP*STLPRRTFIQY
Trigger: ATATTGAATGAATGTGCGCCGTGGGAGTGTTGAGCACGGTTCTGTATTCTTAATAGGAAATGGCAATATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434695.2
3UTR CCA 72 bp ATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTaGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTG +
Preference number: 3 (lower is better)
Translates to: IKQALSQMYKAY*WFNIQEGCCPL
Trigger: CAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR TCA 72 bp ATAATAAACAAGCACCATGAGGAATCTGCTCCTGTTTaGTTAGGTCTGTGTTTATATGTTCACTGTGTACCC +
Preference number: 3 (lower is better)
Translates to: IINKHHEESAPV*LGLCLYVHCVP
Trigger: GGGTACACAGTGAACATATAAACACAGACCTAATCAAACAGGAGCAGATTCCTCATGGTGCTTGTTTATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR GCA 72 bp TCTGACAAAGAAAGCTGCTATTATCTAATTGGAAGGTaGTATTTGGAAGGTTTTCTCGTACCTCAAACTTTC +
Preference number: 3 (lower is better)
Translates to: SDKESCYYLIGR*YLEGFLVPQTF
Trigger: GAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAATAGCAGCTTTCTTTGTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR GCA 72 bp CCTTTGTTTCTTCAGCACATTTCTGACAAAGAAAGCTaGTATTATCTAATTGGAAGGTGCTATTTGGAAGGT +
Preference number: 3 (lower is better)
Translates to: PLFLQHISDKES*YYLIGRCYLEG
Trigger: ACCTTCCAAATAGCACCTTCCAATTAGATAATAGCAGCTTTCTTTGTCAGAAATGTGCTGAAGAAACAAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR GCA 72 bp TCTGTGTTTATATGTTCACTGTGTACCCTCTTTTTGTaGAAGTTGATTACACGGTTTTGTCTGACTTCAAAA +
Preference number: 3 (lower is better)
Translates to: SVFICSLCTLFL*KLITRFCLTSK
Trigger: TTTTGAAGTCAGACAAAACCGTGTAATCAACTTGCACAAAAAGAGGGTACACAGTGAACATATAAACACAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR GCA 72 bp CATATTGACAGAATTGTCTTCTGCACAAGAACATATTaGCATTTCCTATTAAGAATACAGAACCGTGCTCAA +
Preference number: 3 (lower is better)
Translates to: HIDRIVFCTRTY*HFLLRIQNRAQ
Trigger: TTGAGCACGGTTCTGTATTCTTAATAGGAAATGGCAATATGTTCTTGTGCAGAAGACAATTCTGTCAATATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS-3UTR GCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCCCCACCTCTGCAGTaGGGCCTCCAGCGACGGCGG +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDAPPLQ*GLQRRR
Trigger: CCGCCGTCGCTGGAGGCCGCACTGCAGAGGTGGGGC...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGCCAGCCCTCGCGCCTTaGGGGACTCTGTTTGCGAGC +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQPALAP*GTLFAS
Trigger: GCTCGCAAACAGAGTCCCTCAAGGCGCGAGGGCTGG...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACATGGTGCCCCACCTCTaGAGTGCGGCCTCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDMVPHL*SAASSD
Trigger: GTCGCTGGAGGCCGCACTGCAGAGGTGGGGCACCAT...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGCCTTGGGCGAGATGGTaGCCCACCTCTGCAGTGCGG +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQPWARW*PTSAVR
Trigger: CCGCACTGCAGAGGTGGGGCACCATCTCGCCCAAGG...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGAGGTGGTGGACGTGGTaGAGCCGTGGATGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQRWWTW*SRGWPG
Trigger: GCCAGGCCATCCACGGCTCCACCACGTCCACCACCT...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACCATCCCCGGTCTCCATaGGCTCGGCGTTGCCGTACT +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDHPRSP*ARRCRT
Trigger: AGTACGGCAACGCCGAGCTCATGGAGACCGGGGATG...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGGCCCCCTCCGGCTTTaGTTGGTTCGGATCCGGTTG +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDGPLRL*LVRIRL
Trigger: CAACCGGATCCGAACCAACCAAAGCCGGAGGGGGCC...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGCGTTGGTGTCCATGGTaGTCAGGCAGGGCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQRWCPW*SGRAPW
Trigger: CCAAGGCGCCCTGCCTGACCACCATGGACACCAACG...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CCCCGCCCTGGTGCCGAGGTAAGGACGGTGGCACGCTTCAGAAGCCTTGTGGAATGTCAGGCCCCGCCCTaGTGCCGAGGTAAGGACGGT +
Preference number: 4 (lower is better)
Translates to: PRPGAEVRTVARFRSLVECQAPP*CRGKDG
Trigger: ACCGTCCTTACCTCGGCACCAGGGCGGGGCCTGACA...TTCCACAAGGCTTCTGAAGCGTGCCACCGTCCTTACCTCGGCACCAGGGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434695.2
3UTR CAA 72 bp GTCCACAGGCGGCAAACGACGCAGCTGGAGGACTTCTaGCTTCAGCCGGAGCTCTGGCATGAACCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: VHRRQTTQLEDF*LQPELWHEPPG
Trigger: CCCCGGGGGTTCATGCCAGAGCTCCGGCTGAAGCAAGAAGTCCTCCAGCTGCGTCGTTTGCCGCCTGTGGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGTCCGGGGTGGTCTGTaGTCTCCACTGCAAGACCTC +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDVRGGL*SPLQDL
Trigger: GAGGTCTTGCAGTGGAGAGCACAGACCACCCCGGAC...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACCATGGCTTCGTCCAGTaGCCCTACCACGTAGAGGGC +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDHGFVQ*PYHVEG
Trigger: GCCCTCTACGTGGTAGGGGCACTGGACGAAGCCATG...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGTTGGGTGGTACCGCATaGCCCGCAGCTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQLGGTA*PAAPWL
Trigger: AAGCCATGGAGCTGCGGGGCATGCGGTACCACCCAA...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACCACAGTGAGGGCCTCTaGCGAGCTGGCACAAGGACA +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDHSEGL*RAGTRT
Trigger: TGTCCTTGTGCCAGCTCGCCAGAGGCCCTCACTGTG...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTGGCTGGAGGTGGGGGTaGCCTGGGAGTCCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSGWRWG*PGSPPA
Trigger: TGCAGGGGGACTCCCAGGGCACCCCCACCTCCAGCC...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGGCTCTCTTGTGCAGCTaGACGCAGGTCAGCGAGTTC +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQALLCS*TQVSEF
Trigger: GAACTCGCTGACCTGCGTGCAGCTGCACAAGAGAGC...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGTTGAGGGACTCTGTTTaGGAGCCCAGCCCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQLRDSV*EPSPLV
Trigger: CACCAAGGGGCTGGGCTCGCAAACAGAGTCCCTCAA...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACAGCTGGAGGACTTCTTaGTTCAGCCGGAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDSWRTS*FSRSSG
Trigger: GCCAGAGCTCCGGCTGAAGCAAGAAGTCCTCCAGCT...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGGGGGAGGGTGTTTGCTaGCACCAAGGCCAGGCAATA +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQGEGVC*HQGQAI
Trigger: TATTGCCTGGCCTTGGTGCCAGCAAACACCCTCCCC...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACTCACACAGAGCGGGCTaGGTCTTAAGACGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDSHRAG*VLRRGD
Trigger: GTCCCCTCGTCTTAAGACCCAGCCCGCTCTGTGTGA...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTACGGCGGCCAGTTCGTaGCCACGCCCAGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSTAASS*PRPAAL
Trigger: GAGAGCAGCTGGGCGTGGTCACGAACTGGCCGCCGT...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTACCAGGGGCAGCGCCATaGCCTCCAGGCTGCGGTCCG +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVPGAAP*PPGCGP
Trigger: CGGACCGCAGCCTGGAGGGCATGGCGCTGCCCCTGG...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280886.12
CDS-3UTR GCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTGTGACCACGCCCAGCTaGTCTCCGCGCATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSVTTPS*SPRMAS
Trigger: GCTGGCCATGCGCGGAGAGCAGCTGGGCGTGGTCAC...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGAACGACTGTGTGAGTaGGATCCGAGGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDERLCE*DPRPLF
Trigger: GAAGAGAGGCCTCGGATCGCACTCACACAGTCGTTC...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGGTCCTGAGGTTCCCTaGAAGCAAATCGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDGPEVP*KQIARF
Trigger: GAACCTGGCGATTTGCTTGCAGGGAACCTCAGGACC...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGAACTGCCCTCACAACTaGACTGCAGCGTCCACACTC +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQNCPHN*TAASTL
Trigger: GAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTT...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGGGCATCTTTAATGTGTaGGAACCAGTCTCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQGIFNV*EPVSGR
Trigger: CCGCCCCGAGACTGGTTCCCACACATTAAAGATGCC...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACCAAGGTTTGCAGATCTaGGCAGGCCGCTTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDQGLQI*AGRFFG
Trigger: GCCAAAGAAGCGGCCTGCCCAGATCTGCAAACCTTG...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTCTGACGGCCCGCGGGTaGAGGCCCAGGTCCTTAAAC +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSLTARG*RPRSLN
Trigger: GTTTAAGGACCTGGGCCTTCACCCGCGGGCCGTCAG...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACATCAGGGGCAGACTATaGGGGGATCCTCTTTCCACT +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDIRGRL*GDPLST
Trigger: AGTGGAAAGAGGATCCCCTCATAGTCTGCCCCTGAT...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGATACTGTCAATCGCCTaGAGCACACGGCTCATCCAC +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQILSIA*STRLIH
Trigger: GTGGATGAGCCGTGTGCTGCAGGCGATTGACAGTAT...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GCGCACATTCATTCAATATCCACCACGTGTCAGGCCCCGCCCTGGTGCCGAGGTAGCCCAGCCCCTTGGTaGACAGCTCCATCACGGAGT +
Preference number: 4 (lower is better)
Translates to: AHIHSISTTCQAPPWCRGSPAPW*TAPSRS
Trigger: ACTCCGTGATGGAGCTGTGCACCAAGGGGCTGGGCT...ACCTCGGCACCAGGGCGGGGCCTGACACGTGGTGGATATTGAATGAATGTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS-3UTR CCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGAAGAAACCTATCTGCTaGCTCCCTGCGTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQKKPIC*LPASFL
Trigger: CAGGAAGGACGCAGGGAGCCAGCAGATAGGTTTCTT...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTCGTCGCGATGTTCTGTaGGTGCGGGGGACGGACGGT +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSRRDVL*VRGTDG
Trigger: ACCGTCCGTCCCCCGCACCCACAGAACATCGCGACG...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGGGCAGGCCGCTTCTTTaGCAAATCATCTGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQGRPLL*QIICVQ
Trigger: CTGGACACAGATGATTTGCCAAAGAAGCGGCCTGCC...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGGCAGAAGGCACTGGTaGCTGCGTGAGACATCTTTA +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDGRRHW*LRETSL
Trigger: TAAAGATGTCTCACGCAGCCACCAGTGCCTTCTGCC...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGGGGATCAGGATGGACTaGTGCCCAGAATACACACTG +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQGIRMD*CPEYTL
Trigger: CAGTGTGTATTCTGGGCACCAGTCCATCCTGATCCC...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTCATCCCCGGTCTCCATaGGCTCGGCGTTGCCGTACT +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSHPRSP*ARRCRT
Trigger: AGTACGGCAACGCCGAGCTCATGGAGACCGGGGATG...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCCCGACGTCCTTCTTaGAATCCAGCACATTCACAA +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDARRPS*NPAHSQ
Trigger: TTGTGAATGTGCTGGATTTCAAGAAGGACGTCGGGC...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CGTGCTCAACACTCCCACGGCGCACATTCATTCAATATCCACCACGTGTCAGGCCTGACGGCCCGCGGGTaGAGGCCCAGGTCCTTAAAC +
Preference number: 4 (lower is better)
Translates to: RAQHSHGAHSFNIHHVSGLTARG*RPRSLN
Trigger: GTTTAAGGACCTGGGCCTTCACCCGCGGGCCGTCAG...GCCTGACACGTGGTGGATATTGAATGAATGTGCGCCGTGGGAGTGTTGAGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS-3UTR TCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCAACCGAACGAGGTGCTaGCGGCCCGCGGGTGAAGGC +
Preference number: 4 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCNRTRC*RPAGEG
Trigger: GCCTTCACCCGCGGGCCGTCAGCACCTCGTTCGGTT...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTAGCCGGAGCTCTGGCATaGACCCCCGGGGAACTGTGC +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVAGALA*TPGELC
Trigger: GCACAGTTCCCCGGGGGTTCATGCCAGAGCTCCGGC...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTGGAGCCCGGCGTTCTTaGGGCAAAGCTTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSGARRS*GKAWST
Trigger: GGTGGACCAAGCTTTGCCGCAAGAACGCCGGGCTCC...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CGCCCTGGTGCCGAGGTAAGGACGGTGGCACGCTTCAGAAGCCTTGTGGAAAACTTGAGGGACTCTGTTTaGGAGCCCAGCCCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RPGAEVRTVARFRSLVENLRDSV*EPSPLV
Trigger: CACCAAGGGGCTGGGCTCGCAAACAGAGTCCCTCAA...GTTTTCCACAAGGCTTCTGAAGCGTGCCACCGTCCTTACCTCGGCACCAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS-3UTR GCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACTATTCTGGTGAGTGTTaGCCTGTGTCTGCACGCTTC +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDYSGEC*PVSARF
Trigger: GAAGCGTGCAGACACAGGGCAACACTCACCAGAATA...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGCGGCGTTGCCGTACTTaGGCGCTGTCCGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELRRCRT*ALSGTP
Trigger: CGGGGTCCCGGACAGCGCCCAAGTACGGCAACGCCG...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTAGCTGCTCTCCGCGCATaGCCAGCATCTGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVAALRA*PASGPP
Trigger: AGGGGGCCCAGATGCTGGCCATGCGCGGAGAGCAGC...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTTCCCGTTGGTGTCCATaGTGGTCAGGCAGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSSRWCP*WSGRAP
Trigger: AGGCGCCCTGCCTGACCACCATGGACACCAACGGGA...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTTGCCAGGGCAGAAACTaGGGCGCACTCGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSCQGRN*GALVHR
Trigger: CCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCA...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGTTCATAGTCAGTGCCTaGCCTGAAGCCCCAAACCTA +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQFIVSA*PEAPNL
Trigger: TAGGTTTGGGGCTTCAGGCCAGGCACTGACTATGAA...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTACTGCGTCCTTCCTGGTaGGCGGCACCTCGATGGGCA +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVLRPSW*AAPRWA
Trigger: TGCCCATCGAGGTGCCGCTCACCAGGAAGGACGCAG...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTGACCCCGTGGAACCCTaGGGTCTCTCCACCTGTATC +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSDPVEP*GLSTCI
Trigger: GATACAGGTGGAGAGACCGCAGGGTTCCACGGGGTC...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTAATGGTGCCCCACCTCTaGAGTGCGGCCTCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVMVPHL*SAASSD
Trigger: GTCGCTGGAGGCCGCACTGCAGAGGTGGGGCACCAT...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCCCTTGGGCGAGATGGTaGCCCACCTCTGCAGTGCGG +
Preference number: 4 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCPWARW*PTSAVR
Trigger: CCGCACTGCAGAGGTGGGGCACCATCTCGCCCAAGG...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACAGAGGAACAGGAACTTaGGTGCCTGGTCGTTATCTT +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDRGTGT*VPGRYL
Trigger: AAGATAACGACCAGGCACGCAAGTTCCTGTTCCTCT...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCACCCCCGGGGAACTGTaGTCACTGAGCGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCTPGEL*SLSEGA
Trigger: GGCTCCCTCGCTCAGTGAGCACAGTTCCCCGGGGGT...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAAGAGGTGGGGGTGCCCTaGGAGTCCCCCTGCACTGAG +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQEVGVP*ESPCTE
Trigger: CTCAGTGCAGGGGGACTCCCAGGGCACCCCCACCTC...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTAGAGGGGCTTCCCGTTaGTGTCCATGGTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSRGASR*CPWWSG
Trigger: GCCTGACCACCATGGACACCAACGGGAAGCCCCTCT...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACCCAGCACATTCACAATaGTTTCAGCTTCCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDPAHSQ*FQLPCS
Trigger: GCTACACGGAAGCTGAAACCATTGTGAATGTGCTGG...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CAGAACCGTGCTCAACACTCCCACGGCGCACATTCATTCAATATCCACCACGTGGCGAGCCCAGCCCCTTaGTGCACAGCTCCATCACGG +
Preference number: 4 (lower is better)
Translates to: QNRAQHSHGAHSFNIHHVASPAP*CTAPSR
Trigger: CCGTGATGGAGCTGTGCACCAAGGGGCTGGGCTCGC...CACGTGGTGGATATTGAATGAATGTGCGCCGTGGGAGTGTTGAGCACGGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS-3UTR TCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTCCCGTCTGGCTTCACTaGACACATGATGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSPVWLH*THDGSR
Trigger: CCTGGAGCCATCATGTGTTCAGTGAAGCCAGACGGG...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp AACACTCCCACGGCGCACATTCATTCAATATCCACCACGTGTCAGGCCCCGCCCTTGAGAACGACTGTGTaGGTGCGATCCGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: NTPTAHIHSISTTCQAPPLRTTV*VRSEAS
Trigger: AGAGGCCTCGGATCGCACTCACACAGTCGTTCTCAA...GGGCGGGGCCTGACACGTGGTGGATATTGAATGAATGTGCGCCGTGGGAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS-3UTR TCA 90 bp CCTTGTGGAAAACACCAGCACGCCAACTCTGTTCTTCATTCTGTCCCTTTCCTGAACCGAACGAGGTGCTaGCGGCCCGCGGGTGAAGGC +
Preference number: 4 (lower is better)
Translates to: PCGKHQHANSVLHSVPFLNRTRC*RPAGEG
Trigger: GCCTTCACCCGCGGGCCGTCAGCACCTCGTTCGGTT...CAGGAAAGGGACAGAATGAAGAACAGAGTTGGCGTGCTGGTGTTTTCCACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS-3UTR GCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGGGCTGGAGGTGGGGGTaGCCTGGGAGTCCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLGWRWG*PGSPPA
Trigger: TGCAGGGGGACTCCCAGGGCACCCCCACCTCCAGCC...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTCTTGTCAGGATGCCATaGCAGAGCCCGACGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSLVRMP*QSPTSF
Trigger: GAAGGACGTCGGGCTCTGGCATGGCATCCTGACAAG...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAAATGTCGTCGGCGTTGTaGCTGCGCCCGCTGACCACC +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQMSSAL*LRPLTT
Trigger: GGTGGTCAGCGGGCGCAGGCACAACGCCGACGACAT...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTCAAGTAGCCTGTGCGTaGCCAGATGGTCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSQVACA*PDGLGV
Trigger: GACACCCAGACCATCTGGGCACGCACAGGCTACTTG...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATACCCCCGGGGAACTGTaGTCACTGAGCGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHTPGEL*SLSEGA
Trigger: GGCTCCCTCGCTCAGTGAGCACAGTTCCCCGGGGGT...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGACCTCAAAGCTGTCCTaGACACTGCAGCTAATGTTT +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQTSKLS*TLQLMF
Trigger: AAACATTAGCTGCAGTGTGCAGGACAGCTTTGAGGT...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTAAGGAGGTGGTGGACGTaGTGGAGCCGTGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVRRWWT*WSRGWP
Trigger: AGGCCATCCACGGCTCCACCACGTCCACCACCTCCT...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTAAGGACGAGGAGGTGGTaGACGTGGTGGAGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVRTRRW*TWWSRG
Trigger: TCCACGGCTCCACCACGTCCACCACCTCCTCGTCCT...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTACGGCCAGCGCAGTaGCCACGATGTCGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHLRPAQ*PRCRRR
Trigger: ACGCCGACGACATCGTGGCCACTGCGCTGGCCGTAG...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAACTACGGCCAGCGCAGTaGCCACGATGTCGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQLRPAQ*PRCRRR
Trigger: ACGCCGACGACATCGTGGCCACTGCGCTGGCCGTAG...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTCACCAAGCGGGGTTTTaGGGAGGGTGTTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSHQAGF*GGCLLA
Trigger: TGCCAGCAAACACCCTCCCCAAAACCCCGCTTGGTG...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGCCGCCGCCGCCTCCCTaGACCGCAGCAACTTACAGA +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELPPPPP*TAATYR
Trigger: TCTGTAAGTTGCTGCGGTCCAGGGAGGCGGCGGCGG...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTACTTCAGCCGGAGCTCTaGCATGAACCCCCGGGGAAC +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVLQPEL*HEPPGN
Trigger: GTTCCCCGGGGGTTCATGCCAGAGCTCCGGCTGAAG...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GGCGCACATTCATTCAATATCCACCACGTGTCAGGCCCCGCCCTGGTGCCGAGGGCTTCAGAAGCCTTGTaGAAAACACCAGCACGCCAA +
Preference number: 4 (lower is better)
Translates to: GAHSFNIHHVSGPALVPRASEAL*KTPARQ
Trigger: TTGGCGTGCTGGTGTTTTCCACAAGGCTTCTGAAGC...CCTCGGCACCAGGGCGGGGCCTGACACGTGGTGGATATTGAATGAATGTGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS-3UTR TCA 90 bp TCAGAAGCCTTGTGGAAAACACCAGCACGCCAACTCTGTTCTTCATTCTGTCCCCCAGCCCTCGCGCCTTaGGGGACTCTGTTTGCGAGC +
Preference number: 4 (lower is better)
Translates to: SEALWKTPARQLCSSFCPPALAP*GTLFAS
Trigger: GCTCGCAAACAGAGTCCCTCAAGGCGCGAGGGCTGG...GGGACAGAATGAAGAACAGAGTTGGCGTGCTGGTGTTTTCCACAAGGCTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS-3UTR TCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGAACCGAACGAGGTGCTaGCGGCCCGCGGGTGAAGGC +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLNRTRC*RPAGEG
Trigger: GCCTTCACCCGCGGGCCGTCAGCACCTCGTTCGGTT...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGGCCGGAGCTCTGGCATaGACCCCCGGGGAACTGTGC +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLAGALA*TPGELC
Trigger: GCACAGTTCCCCGGGGGTTCATGCCAGAGCTCCGGC...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGATTTGTTTTGCTTCCTaGCTTCAGCTGGACCTCAAA +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQICFAS*LQLDLK
Trigger: TTTGAGGTCCAGCTGAAGTCAGGAAGCAAAACAAAT...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAAGCGTCCATCGAGGTCTaGACGACCAGGGACCTGCGT +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQASIEV*TTRDLR
Trigger: ACGCAGGTCCCTGGTCGTGCAGACCTCGATGGACGC...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCTACTAATGCCCAATaGATATCCCTCGATTTCACA +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDATNAQ*ISLDFT
Trigger: TGTGAAATCGAGGGATATGCATTGGGCATTAGTAGC...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGACGAGGCCGACATCCTaGACGGTGAGCACGGACAGC +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESTRPTS*TVSTDS
Trigger: GCTGTCCGTGCTCACCGTGCAGGATGTCGGCCTCGT...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGGAGGTGGGGGTGCCCTaGGAGTCCCCCTGCACTGAG +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLEVGVP*ESPCTE
Trigger: CTCAGTGCAGGGGGACTCCCAGGGCACCCCCACCTC...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATGACGTGGTGGAGCCGTaGATGGCCTGGCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHDVVEP*MAWLIQ
Trigger: CTGGATCAGCCAGGCCATCCACGGCTCCACCACGTC...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATAGGACGAGGAGGTGGTaGACGTGGTGGAGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHRTRRW*TWWSRG
Trigger: TCCACGGCTCCACCACGTCCACCACCTCCTCGTCCT...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGGGCCCCCTCCGGCTTTaGTTGGTTCGGATCCGGTTG +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELGPLRL*LVRIRL
Trigger: CAACCGGATCCGAACCAACCAAAGCCGGAGGGGGCC...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCTCAGGCAGGGCGCCTTaGGCGAGATGGTGCCCCACC +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSSGRAP*ARWCPT
Trigger: GGTGGGGCACCATCTCGCCCAAGGCGCCCTGCCTGA...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGTCCCGTTGGTGTCCATaGTGGTCAGGCAGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESSRWCP*WSGRAP
Trigger: AGGCGCCCTGCCTGACCACCATGGACACCAACGGGA...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCCCCCGGCCCGGGGGCTaGTTACTGTCATCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVPRPGG*LLSSVG
Trigger: GCCCACGGATGACAGTAACCAGCCCCCGGGCCGGGG...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGAGGTCAGTCCATGCATaGAGAGGACACCCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELRSVHA*RGHPGP
Trigger: CGGGCCGGGGTGTCCTCTCCATGCATGGACTGACCT...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGTGCCCCGCAGCTCCATaGCTTCGTCCAGTGCCCCTA +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELCPAAP*LRPVPL
Trigger: TAGGGGCACTGGACGAAGCCATGGAGCTGCGGGGCA...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTGCGGTCTGCGACTGCTaGCAACAGCAGAGTGTATGT +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSAVCDC*QQQSVC
Trigger: ACATACACTCTGCTGTTGCCAGCAGTCGCAGACCGC...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTTCAGCCGGAGCTCTaGCATGAACCCCCGGGGAAC +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHLQPEL*HEPPGN
Trigger: GTTCCCCGGGGGTTCATGCCAGAGCTCCGGCTGAAG...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTGGCAAACGACGCAGCTaGAGGACTTCTTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSGKRRS*RTSCFS
Trigger: GCTGAAGCAAGAAGTCCTCCAGCTGCGTCGTTTGCC...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCCAGGGCAGAAACTaGGGCGCACTCGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQCQGRN*GALVHR
Trigger: CCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCA...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTCTGTATCGAGTGCTCTaGGGTGTACGTGGTTACGTC +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSLYRVL*GVRGYV
Trigger: GACGTAACCACGTACACCTCAGAGCACTCGATACAG...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTTCTCGGACTTTGTACTaGCTCACGGCAAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSSRTLY*LTARSH
Trigger: GTGGCTTCTTGCCGTGAGTCAGTACAAAGTCCGAGA...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGCCAGCCCTCGCGCCTTaGGGGACTCTGTTTGCGAGC +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLPALAP*GTLFAS
Trigger: GCTCGCAAACAGAGTCCCTCAAGGCGCGAGGGCTGG...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCCTGACGGCCCGCGGGTaGAGGCCCAGGTCCTTAAAC +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSLTARG*RPRSLN
Trigger: GTTTAAGGACCTGGGCCTTCACCCGCGGGCCGTCAG...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGGGGAACTGTGCTCACTaGGCGAGGGAGCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLGNCAH*AREPQR
Trigger: CCTCTGGGGCTCCCTCGCTCAGTGAGCACAGTTCCC...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATTGCACAGGTGAGCTCTaGGAAGGTGTGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHCTGEL*EGVARS
Trigger: GCTCCTGGCCACACCTTCTCAGAGCTCACCTGTGCA...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTGGAAGGCATAGGCACTaGCATCTTCCGCTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSGRHRH*HLPLFV
Trigger: CACAAAGAGCGGAAGATGGCAGTGCCTATGCCTTCC...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCCCCTGGGAGTCCCCCTaGACTGAGCCTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCPWESP*TEPSSS
Trigger: AGAAGATGAAGGCTCAGTGCAGGGGGACTCCCAGGG...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCGGGCCGATTTCTGGCTaGTTCTGTCGAGGCTTAGGC +
Preference number: 4 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCGPISG*FCRGLG
Trigger: GCCTAAGCCTCGACAGAAGCAGCCAGAAATCGGCCC...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATTCTGACCCAGGTCTCTaGCACTGGCCTGGGCGATTC +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHSDPGL*HWPGRF
Trigger: GAATCGCCCAGGCCAGTGGCAGAGACCTGGGTCAGA...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCGCTCTCTTGTGCAGCTaGACGCAGGTCAGCGAGTTC +
Preference number: 4 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCALLCS*TQVSEF
Trigger: GAACTCGCTGACCTGCGTGCAGCTGCACAAGAGAGC...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGAGCCCAGCCCCTTGGTaGACAGCTCCATCACGGAGT +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESSPAPW*TAPSRS
Trigger: ACTCCGTGATGGAGCTGTGCACCAAGGGGCTGGGCT...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAAACCCCAAGTAGCCTGTaGGTGCCCAGATGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQTPSSL*VPRWSG
Trigger: CCCAGACCATCTGGGCACGCACAGGCTACTTGGGGT...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGCATGGCTTCGTCCAGTaGCCCTACCACGTAGAGGGC +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESHGFVQ*PYHVEG
Trigger: GCCCTCTACGTGGTAGGGGCACTGGACGAAGCCATG...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTCAGAGGGGGAATCAATaGAACCCAGTGCGAATGACC +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSQRGNQ*NPVRMT
Trigger: GGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTG...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGAGCACCGAGAGCCACTaGGGGGTCACACTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLSTESH*GVTLGQ
Trigger: CTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCT...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp ACATTCATTCAATATCCACCACGTGTCAGGCCCCGCCCTGGTGCCGAGGTAAGGAAGAATACAGAACCGTaGTCAACACTCCCACGGCGC +
Preference number: 4 (lower is better)
Translates to: TFIQYPPRVRPRPGAEVRKNTEP*STLPRR
Trigger: GCGCCGTGGGAGTGTTGAGCACGGTTCTGTATTCTT...CCTTACCTCGGCACCAGGGCGGGGCCTGACACGTGGTGGATATTGAATGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS-3UTR CCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCCTGTCCGGGACCCCGTaGAACCCTGCGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSLSGTP*NPAVSP
Trigger: TGGAGAGACCGCAGGGTTCCACGGGGTCCCGGACAG...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCCTCCAGGCCGGACCATaGGTTCCTGCTTTGTGCCTA +
Preference number: 4 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCLQAGP*VPALCL
Trigger: TAGGCACAAAGCAGGAACCCATGGTCCGGCCTGGAG...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTAAGAAACCTATCTGCTaGCTCCCTGCGTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSKKPIC*LPASFL
Trigger: CAGGAAGGACGCAGGGAGCCAGCAGATAGGTTTCTT...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGCACAGTGAGGGCCTCTaGCGAGCTGGCACAAGGACA +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELHSEGL*RAGTRT
Trigger: TGTCCTTGTGCCAGCTCGCCAGAGGCCCTCACTGTG...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATGGTTACTGTCATCCGTaGGCCTCCGGATGGCCACAG +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHGYCHP*ASGWPQ
Trigger: CTGTGGCCATCCGGAGGCCCACGGATGACAGTAACC...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTAGGGGAGGGTGTTTGCTaGCACCAAGGCCAGGCAATA +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVGEGVC*HQGQAI
Trigger: TATTGCCTGGCCTTGGTGCCAGCAAACACCCTCCCC...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTAGGCAGGGCCGATTTCTaGCTGCTTCTGTCGAGGCTT +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVGRADF*LLLSRL
Trigger: AAGCCTCGACAGAAGCAGCCAGAAATCGGCCCTGCC...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTATCTCTGCCACTGGCCTaGGCGATTCTCTTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVSLPLA*AILFPE
Trigger: CTCTGGGAAGAGAATCGCCCAGGCCAGTGGCAGAGA...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGCGTCGCGATGTTCTGTaGGTGCGGGGGACGGACGGT +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLRRDVL*VRGTDG
Trigger: ACCGTCCGTCCCCCGCACCCACAGAACATCGCGACG...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGTCCAGTGCTCCATATTaGTGCTGCCCTGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELSSAPY*CCPGWR
Trigger: CCTCCAGCCAGGGCAGCATCAATATGGAGCACTGGA...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAACGACATCCTGCACGGTaGGCACGGACAGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQRHPAR*ARTASL
Trigger: AAGAGAAGCTGTCCGTGCTCACCGTGCAGGATGTCG...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGTCGCACCCCGACAGTTaGGCAGCGTGTAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESSHPDS*AACRGC
Trigger: ACATCCTCTACACGCTGCTCAACTGTCGGGGTGCGA...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGGCACTGGTGGCTGCGTaGGACATCTTTACGCCAGCT +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESALVAA*DIFTPA
Trigger: AGCTGGCGTAAAGATGTCTCACGCAGCCACCAGTGC...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAACCCTGGGAGTCCCCCTaGACTGAGCCTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQPWESP*TEPSSS
Trigger: AGAAGATGAAGGCTCAGTGCAGGGGGACTCCCAGGG...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTTCCACCTGTATCGAGTaGTCTGAGGTGTACGTGGTT +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSSTCIE*SEVYVV
Trigger: AACCACGTACACCTCAGAGCACTCGATACAGGTGGA...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGCTTGTCAGGATGCCATaGCAGAGCCCGACGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELLVRMP*QSPTSF
Trigger: GAAGGACGTCGGGCTCTGGCATGGCATCCTGACAAG...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCATGTCGTCGGCGTTGTaGCTGCGCCCGCTGACCACC +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVMSSAL*LRPLTT
Trigger: GGTGGTCAGCGGGCGCAGGCACAACGCCGACGACAT...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTATTCTCAGCTCTCTTGTaGAGCTGCACGCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVFSALL*SCTQVS
Trigger: GCTGACCTGCGTGCAGCTGCACAAGAGAGCTGAGAA...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGCTGGGTTGCAAGGTTTaGAGATCTGGGCAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELLGCKV*RSGQAA
Trigger: AGCGGCCTGCCCAGATCTGCAAACCTTGCAACCCAG...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAAGTGTTGCCCTGTGTCTaGACGCTTCAGTGGACACGG +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQVLPCV*TLQWTR
Trigger: CCGTGTCCACTGAAGCGTGCAGACACAGGGCAACAC...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGGTGTTGCCCTGTGTCTaGACGCTTCAGTGGACACGG +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESVLPCV*TLQWTR
Trigger: CCGTGTCCACTGAAGCGTGCAGACACAGGGCAACAC...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCAGGGCTCCTGCGGTCTaGGACTGCTGGCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSRAPAV*DCWQQQ
Trigger: CTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCT...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATTTTAGACAGGGCTCCTaGGGTCTGCGACTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHFRQGS*GLRLLA
Trigger: TGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAA...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGTTTAGACAGGGCTCCTaGGGTCTGCGACTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELFRQGS*GLRLLA
Trigger: TGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAA...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATAGCTGGAGGACTTCTTaGTTCAGCCGGAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHSWRTS*FSRSSG
Trigger: GCCAGAGCTCCGGCTGAAGCAAGAAGTCCTCCAGCT...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGGAGGCGGCTGCTAACTaGCCTCACAACTGCACTGCA +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELEAAAN*PHNCTA
Trigger: TGCAGTGCAGTTGTGAGGGCAGTTAGCAGCCGCCTC...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACTGTACCCTCTTTTTGTaGAAGTTGATTACACGGTTT +
Preference number: 4 (lower is better)
Translates to: QELPGQKLGRTRPQAANDCTLFL*KLITRF
Trigger: AAACCGTGTAATCAACTTGCACAAAAAGAGGGTACA...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GTCAGGCCCCGCCCTGGTGCCGAGGTAAGGACGGTGGCACGCTTCAGAAGCCTTGACAGAATTGTCTTCTaGACAAGAACATATTGCCAT +
Preference number: 4 (lower is better)
Translates to: VRPRPGAEVRTVARFRSLDRIVF*TRTYCH
Trigger: ATGGCAATATGTTCTTGTGCAGAAGACAATTCTGTC...AAGGCTTCTGAAGCGTGCCACCGTCCTTACCTCGGCACCAGGGCGGGGCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS-3UTR CCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGTTGGCCAGAGCCGCCTaGACAGCTTCCGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLLARAA*TASVWT
Trigger: CGTCCACACGGAAGCTGTCCAGGCGGCTCTGGCCAA...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTAGCCAGAAGAGGTATCTaGAGGGGTGTAGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVARRGI*RGVGVH
Trigger: ATGGACGCCTACACCCCTCCAGATACCTCTTCTGGC...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAAGAGCCGTGGATGGCCTaGCTGATCCAGTGCTCCATA +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQEPWMA*LIQCSI
Trigger: TATGGAGCACTGGATCAGCCAGGCCATCCACGGCTC...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGGACGTGGTGGAGCCGTaGATGGCCTGGCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLDVVEP*MAWLIQ
Trigger: CTGGATCAGCCAGGCCATCCACGGCTCCACCACGTC...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCAGGAGGTGGTGGACGTaGTGGAGCCGTGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSRRWWT*WSRGWP
Trigger: AGGCCATCCACGGCTCCACCACGTCCACCACCTCCT...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGCACCCGGCTACTTACTaGTACTCCATCCCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELHPATY*YSIPGL
Trigger: GAGACCGGGGATGGAGTACCAGTAAGTAGCCGGGTG...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGCGTTGGTGTCCATGGTaGTCAGGCAGGGCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLRWCPW*SGRAPW
Trigger: CCAAGGCGCCCTGCCTGACCACCATGGACACCAACG...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGCAGCCGGATCATTGTTaGGGAACACCAGTGCCACCC +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELQPDHC*GTPVPP
Trigger: GGGTGGCACTGGTGTTCCCCAACAATGATCCGGCTG...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGAGGTCAGTCCATGCATaGAGAGGACACCCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLRSVHA*RGHPGP
Trigger: CGGGCCGGGGTGTCCTCTCCATGCATGGACTGACCT...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTAAACTGTCCTCTTCCGTaGAGTCAGGCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVNCPLP*SQASAQ
Trigger: CTGAGCAGAGGCCTGACTCCACGGAAGAGGACAGTT...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCAACGGCAGAAGGCACTaGTGGCTGCGTGAGACATCT +
Preference number: 4 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCNGRRH*WLRETS
Trigger: AGATGTCTCACGCAGCCACCAGTGCCTTCTGCCGTT...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTAAGGGCGGGATCAGGATaGACTGGTGCCCAGAATACA +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVRAGSG*TGAQNT
Trigger: TGTATTCTGGGCACCAGTCCATCCTGATCCCGCCCT...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCTGTCCACGTAGACAGTaGTTGGGTCAGGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCCPRRQ*LGQVLR
Trigger: CCTCAGGACCTGACCCAACCACTGTCTACGTGGACA...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCGGCAAACGACGCAGCTaGAGGACTTCTTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCGKRRS*RTSCFS
Trigger: GCTGAAGCAAGAAGTCCTCCAGCTGCGTCGTTTGCC...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGTTTTCTATGTGGGTCTaGGCCATGACGTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESFSMWV*AMTSAS
Trigger: GCTGGCGGACGTCATGGCTCAGACCCACATAGAAAA...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGACAGCTTGCCGTAAGTaGGGATGTAGAGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELTACRK*GCRGAS
Trigger: GGAAGCCCCTCTACATCCTCACTTACGGCAAGCTGT...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAACGTAGAAAGCCGCCATaGAGGCAGCCGGATCATTGT +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQRRKPP*RQPDHC
Trigger: ACAATGATCCGGCTGCCTTCATGGCGGCTTTCTACG...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGCGTAGAAAGCCGCCATaGAGGCAGCCGGATCATTGT +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELRRKPP*RQPDHC
Trigger: ACAATGATCCGGCTGCCTTCATGGCGGCTTTCTACG...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGTGGCACAAGGACAGATaGCCTCCTGTCGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESWHKDR*PPVEGL
Trigger: AAGGCCTTCGACAGGAGGTCATCTGTCCTTGTGCCA...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGCCGAGTCCACACGAATaGCCCCATAGGTCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESPSPHE*PHRSVH
Trigger: ATGGACTGACCTATGGGGTCATTCGTGTGGACTCGG...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTATCGTTATCTTCGATCTaGCCCAGGTCTCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVSLSSI*PRSLPL
Trigger: CAGTGGCAGAGACCTGGGTCAGATCGAAGATAACGA...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGTTGAGAACGACTGTGTaGGTGCGATCCGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELLRTTV*VRSEAS
Trigger: AGAGGCCTCGGATCGCACTCACACAGTCGTTCTCAA...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGTTGAGAACGACTGTGTaGGTGCGATCCGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESLRTTV*VRSEAS
Trigger: AGAGGCCTCGGATCGCACTCACACAGTCGTTCTCAA...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCCTCCATTTGCATCTGTaGGCTCAGTTCTCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCLHLHL*AQFSAG
Trigger: TCCTGCGGAGAACTGAGCTCACAGATGCAAATGGAG...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGCAATCGTGGCTGCTGTaGGAAGTCCTCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESQSWLL*EVLFLL
Trigger: GAGGAGGAAGAGGACTTCTCACAGCAGCCACGATTG...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATGGACGATCACCGATGTaGGTTCCGGACACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHGRSPM*VPDTLS
Trigger: GGACAAAGTGTCCGGAACTCACATCGGTGATCGTCC...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCAGTCAGTGCCTGGCCTaGAGCCCCAAACCTACCTCC +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSSQCLA*SPKPTS
Trigger: GGAGGTAGGTTTGGGGCTTCAGGCCAGGCACTGACT...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTGGCTGGTTGAGTACATaGGTTTCTCTAACCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSGWLST*VSLTSH
Trigger: GTGACTGGTTAGAGAAACTCATGTACTCAACCAGCC...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCGGAGCCCGGCGTTCTTaGGGCAAAGCTTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVGARRS*GKAWST
Trigger: GGTGGACCAAGCTTTGCCGCAAGAACGCCGGGCTCC...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATGCCTGGCTGATCCAGTaGTCCATATTGATGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHAWLIQ*SILMLP
Trigger: GGGCAGCATCAATATGGAGCACTGGATCAGCCAGGC...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGGACCCCGTGGAACCCTaGGGTCTCTCCACCTGTATC +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLDPVEP*GLSTCI
Trigger: GATACAGGTGGAGAGACCGCAGGGTTCCACGGGGTC...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTCACACACGCCACTTTTaGTTTGTACTGGCAGACCTT +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSHTRHF*FVLADL
Trigger: AAGGTCTGCCAGTACAAAGCAAAAGTGGCGTGTGTG...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGGAAGACATTGAGAAATaGATCGCAAGAAGAAATAGA +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQEDIEK*IARRNR
Trigger: TCTATTTCTTCTTGCGATGCATTTCTCAATGTCTTC...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCACGAGGCCGACATCCTaGACGGTGAGCACGGACAGC +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVTRPTS*TVSTDS
Trigger: GCTGTCCGTGCTCACCGTGCAGGATGTCGGCCTCGT...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATGGCACATTAGGACATTaGAGGGGTGCAGAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHGTLGH*RGAESP
Trigger: AGGGCTCTCTGCACCCCTGCAATGTCCTAATGTGCC...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGTTCTCAGCTCTCTTGTaGAGCTGCACGCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESFSALL*SCTQVS
Trigger: GCTGACCTGCGTGCAGCTGCACAAGAGAGCTGAGAA...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGGAAGGCACTGGTGGCTaGGTGAGACATCTTTACGCC +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELEGTGG*VRHLYA
Trigger: GGCGTAAAGATGTCTCACGCAGCCACCAGTGCCTTC...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTATGGCGCTCTCCATTTaGATCTGTGAGCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSMALSI*ICELSS
Trigger: AGAACTGAGCTCACAGATGCAAATGGAGAGCGCCAT...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGTTGGGTGGTACCGCATaGCCCGCAGCTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLLGGTA*PAAPWL
Trigger: AAGCCATGGAGCTGCGGGGCATGCGGTACCACCCAA...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTACAGAGGGGGAATCAATaGAACCCAGTGCGAATGACC +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVQRGNQ*NPVRMT
Trigger: GGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTG...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGAACTGCCCTCACAACTaGACTGCAGCGTCCACACTC +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESNCPHN*TAASTL
Trigger: GAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTT...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGCGGCGTTGCCGTACTTaGGCGCTGTCCGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPRRCRT*ALSGTP
Trigger: CGGGGTCCCGGACAGCGCCCAAGTACGGCAACGCCG...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCGGTTACTGTCATCCGTaGGCCTCCGGATGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSGYCHP*ASGWPQ
Trigger: CTGTGGCCATCCGGAGGCCCACGGATGACAGTAACC...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGCCCCGGCCCGGGGGCTaGTTACTGTCATCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPPRPGG*LLSSVG
Trigger: GCCCACGGATGACAGTAACCAGCCCCCGGGCCGGGG...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTGCCTGTCCTTATGAATaGGTATTCACTGATCGGAGC +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSACPYE*VFTDRS
Trigger: GCTCCGATCAGTGAATACCCATTCATAAGGACAGGC...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGGGATGTGGTCCGGGGTaGTCTGTGCTCTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLGCGPG*SVLSTA
Trigger: TGCAGTGGAGAGCACAGACCACCCCGGACCACATCC...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAAAGGGCGGGATCAGGATaGACTGGTGCCCAGAATACA +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQRAGSG*TGAQNT
Trigger: TGTATTCTGGGCACCAGTCCATCCTGATCCCGCCCT...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTATGTAGGCCACATAGATaGGGTCTAGCTGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVCRPHR*GLAGLP
Trigger: TGGCAGACCAGCTAGACCCCATCTATGTGGCCTACA...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGATGTACAAAGCGTACTaGTGGTTTAACATACAAGAA +
Preference number: 4 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQMYKAY*WFNIQE
Trigger: TTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGCTGCTGGATTTTTGCTaGCACCCGGCTACTTACTGG +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESLLDFC*HPATYW
Trigger: CCAGTAAGTAGCCGGGTGTCAGCAAAAATCCAGCAG...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCCCCGTCTGGCTTCACTaGACACATGATGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSPVWLH*THDGSR
Trigger: CCTGGAGCCATCATGTGTTCAGTGAAGCCAGACGGG...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACACGTGGTCGCCGTCCTaGAGGTGGCCCCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHTWSPS*RWPLSI
Trigger: GATGGAGAGGGGCCACCTTCAGGACGGCGACCACGT...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCGCACTGGTGGCTGCGTaGGACATCTTTACGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSALVAA*DIFTPA
Trigger: AGCTGGCGTAAAGATGTCTCACGCAGCCACCAGTGC...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATCTCGGACTTTGTACTaGCTCACGGCAAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQSRTLY*LTARSH
Trigger: GTGGCTTCTTGCCGTGAGTCAGTACAAAGTCCGAGA...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAAATCAGGGGCAGACTATaGGGGGATCCTCTTTCCACT +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQIRGRL*GDPLST
Trigger: AGTGGAAAGAGGATCCCCTCATAGTCTGCCCCTGAT...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGGCAACCCAGTGCGAATaGCCACAGAATCGCATTCCT +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESATQCE*PQNRIP
Trigger: AGGAATGCGATTCTGTGGTCATTCGCACTGGGTTGC...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCCCATGCCCTCCAGGCTaGGGTCCGCCATGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVPCPPG*GPPCSA
Trigger: CGCGGAGCATGGCGGACCGCAGCCTGGAGGGCATGG...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280886.12
CDS-3UTR GCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCGTGACCACGCCCAGCTaGTCTCCGCGCATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLVTTPS*SPRMAS
Trigger: GCTGGCCATGCGCGGAGAGCAGCTGGGCGTGGTCAC...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTGCCCCACCTCTGCAGTaGGGCCTCCAGCGACGGCGG +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPAPPLQ*GLQRRR
Trigger: CCGCCGTCGCTGGAGGCCGCACTGCAGAGGTGGGGC...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTATCACACCCAGCACACTaGCATCCTTACACGTCTTGT +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVSHPAH*HPYTSC
Trigger: ACAAGACGTGTAAGGATGGCAGTGTGCTGGGTGTGA...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGGTGGAGTCAGGCCTCTaGTCAGCCACGATCACGATC +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLVESGL*SATITI
Trigger: GATCGTGATCGTGGCTGAGCAGAGGCCTGACTCCAC...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAAGTCTGTGCTCTCCACTaGAAGACCTCTGAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQVCALH*KTSERN
Trigger: GTTCCTCTCAGAGGTCTTGCAGTGGAGAGCACAGAC...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCCTGGGTTGCAAGGTTTaGAGATCTGGGCAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSLGCKV*RSGQAA
Trigger: AGCGGCCTGCCCAGATCTGCAAACCTTGCAACCCAG...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGGCCCAGAATACACACTaGAGAGGCACCAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELAQNTH*RGTRGQ
Trigger: TTGTCCTCTGGTGCCTCTGCAGTGTGTATTCTGGGC...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCAGCCCAGCCCCTTGGTaGACAGCTCCATCACGGAGT +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVSPAPW*TAPSRS
Trigger: ACTCCGTGATGGAGCTGTGCACCAAGGGGCTGGGCT...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACAGCACCGAGAGCCACTaGGGGGTCACACTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHSTESH*GVTLGQ
Trigger: CTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCT...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCGAGGCGGCTGCTAACTaGCCTCACAACTGCACTGCA +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSEAAAN*PHNCTA
Trigger: TGCAGTGCAGTTGTGAGGGCAGTTAGCAGCCGCCTC...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp ACAAGAACATATTGCCATTTCCTATTAAGAATACAGAACCGTGCTCAACACTCCCAGGCCCCGCCCTGGTaGCGAGGTAAGGACGGTGGC +
Preference number: 4 (lower is better)
Translates to: TRTYCHFLLRIQNRAQHSQAPPW*RGKDGG
Trigger: GCCACCGTCCTTACCTCGGCACCAGGGCGGGGCCTG...GGAGTGTTGAGCACGGTTCTGTATTCTTAATAGGAAATGGCAATATGTTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS-3UTR CCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACGCGCCTTGGGCGAGATaGTGCCCCACCTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHAPWAR*CPTSAV
Trigger: CACTGCAGAGGTGGGGCACCATCTCGCCCAAGGCGC...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCCCAACCTTTAAACTGTaGGATCTCTCCCGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCPTFKL*DLSRWA
Trigger: AGCCCAACGGGAGAGATCCCACAGTTTAAAGGTTGG...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCCCCGGAGCTTGTCATaGGAAACACCTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHPRSLS*ETPQRC
Trigger: ACACCTTTGAGGTGTTTCCCATGACAAGCTCCGGGG...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGTATCAGGTCTATTCCTaGGGGGTAGACCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESYQVYS*GVDQGH
Trigger: GTGGCCTTGGTCTACCCCCCAGGAATAGACCTGATA...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATGGCAGAAGGCACTGGTaGCTGCGTGAGACATCTTTA +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHGRRHW*LRETSL
Trigger: TAAAGATGTCTCACGCAGCCACCAGTGCCTTCTGCC...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCGTCTGCACGCTTCAGTaGACACGGAGAACAATGTCT +
Preference number: 4 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCVCTLQ*TRRTMS
Trigger: AGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGAC...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCTCCAGTGCTCCATATTaGTGCTGCCCTGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVSSAPY*CCPGWR
Trigger: CCTCCAGCCAGGGCAGCATCAATATGGAGCACTGGA...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGACAGCTTGCCGTAAGTaGGGATGTAGAGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLTACRK*GCRGAS
Trigger: GGAAGCCCCTCTACATCCTCACTTACGGCAAGCTGT...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGGCCCGACGTCCTTCTTaGAATCCAGCACATTCACAA +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESARRPS*NPAHSQ
Trigger: TTGTGAATGTGCTGGATTTCAAGAAGGACGTCGGGC...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATGCGAGTACGGGATGCTaGTCACATGCATCATGTTCA +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHASTGC*SHASCS
Trigger: TGAACATGATGCATGTGATCAGCATCCCGTACTCGC...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGGCGAGTACGGGATGCTaGTCACATGCATCATGTTCA +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESASTGC*SHASCS
Trigger: TGAACATGATGCATGTGATCAGCATCCCGTACTCGC...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATGCAGAGAGGAGAGGTTaGTGTCTCTCTGATCTCTGT +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHAERRG*CLSDLC
Trigger: ACAGAGATCAGAGAGACATCAACCTCTCCTCTCTGC...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCTGGCACAAGGACAGATaGCCTCCTGTCGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSWHKDR*PPVEGL
Trigger: AAGGCCTTCGACAGGAGGTCATCTGTCCTTGTGCCA...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGACGTGGTCGCCGTCCTaGAGGTGGCCCCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPTWSPS*RWPLSI
Trigger: GATGGAGAGGGGCCACCTTCAGGACGGCGACCACGT...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCAGTTGTGGACACGCTaGAGTCGAGATATGCAAGAG +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHQLWTR*SRDMQE
Trigger: CTCTTGCATATCTCGACTTCAGCGTGTCCACAACTG...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGAATCTCTCCAAGGTGTaGGTCCCCCAGCGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLNLSKV*VPQRSF
Trigger: AAAGGACCGCTGGGGGACTCACACCTTGGAGAGATT...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTTTACACGGTTTTGTCTaGCTTCAAAAGCACAAGGTC +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSLHGFV*LQKHKV
Trigger: GACCTTGTGCTTTTGAAGTCAGACAAAACCGTGTAA...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATTCCACCTGTATCGAGTaGTCTGAGGTGTACGTGGTT +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHSTCIE*SEVYVV
Trigger: AACCACGTACACCTCAGAGCACTCGATACAGGTGGA...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATTCACACCCAGCACACTaGCATCCTTACACGTCTTGT +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHSHPAH*HPYTSC
Trigger: ACAAGACGTGTAAGGATGGCAGTGTGCTGGGTGTGA...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCGGCCATAGTAGGACGTaGCCGTCGCAACTGCACACA +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVGHSRT*PSQLHT
Trigger: TGTGTGCAGTTGCGACGGGCACGTCCTACTATGGCC...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGAGGTGTTCTTGGTCATaGCAGAGAGGCCATAGTAGG +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELRCSWS*QRGHSR
Trigger: CCTACTATGGCCTCTCTGGCATGACCAAGAACACCT...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCGAAGGCACTGGTGGCTaGGTGAGACATCTTTACGCC +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSEGTGG*VRHLYA
Trigger: GGCGTAAAGATGTCTCACGCAGCCACCAGTGCCTTC...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGATCAGGATGGACTGGTaGCCAGAATACACACTGCAG +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESIRMDW*PEYTLQ
Trigger: CTGCAGTGTGTATTCTGGGCACCAGTCCATCCTGAT...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAAGCCTTGTGGAAAACACCAGCACGCCAACTCTGTTCTTCATTCTGTCCCTTTGAACGACTGTGTGAGTaGGATCCGAGGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: EALWKTPARQLCSSFCPFERLCE*DPRPLF
Trigger: GAAGAGAGGCCTCGGATCGCACTCACACAGTCGTTC...AAAGGGACAGAATGAAGAACAGAGTTGGCGTGCTGGTGTTTTCCACAAGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS-3UTR GCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGTATTCTGGTGAGTGTTaGCCTGTGTCTGCACGCTTC +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESYSGEC*PVSARF
Trigger: GAAGCGTGCAGACACAGGGCAACACTCACCAGAATA...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCTCCGCTCTTTGTGTTTaGCCAGAGCCGCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVSALCV*PEPPGQ
Trigger: CTGTCCAGGCGGCTCTGGCCAAACACAAAGAGCGGA...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCGCTGCTCTCCGCGCATaGCCAGCATCTGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVAALRA*PASGPP
Trigger: AGGGGGCCCAGATGCTGGCCATGCGCGGAGAGCAGC...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTATGGGATCTCTCCCGTTaGGCTTTTTGGAAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVWDLSR*AFWKSF
Trigger: AAAGGACTTCCAAAAAGCCCAACGGGAGAGATCCCA...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATTTTGTGACGCAGGTGTaGGGGCACATTAGGACATTG +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHFVTQV*GHIRTL
Trigger: CAATGTCCTAATGTGCCCCCACACCTGCGTCACAAA...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCTCTCTGCCACTGGCCTaGGCGATTCTCTTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVSLPLA*AILFPE
Trigger: CTCTGGGAAGAGAATCGCCCAGGCCAGTGGCAGAGA...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGCGAGCCCAGCCCCTTaGTGCACAGCTCCATCACGG +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPASPAP*CTAPSR
Trigger: CCGTGATGGAGCTGTGCACCAAGGGGCTGGGCTCGC...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACTGCCCCGCAGCTCCATaGCTTCGTCCAGTGCCCCTA +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHCPAAP*LRPVPL
Trigger: TAGGGGCACTGGACGAAGCCATGGAGCTGCGGGGCA...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATTGTCCACTCCACATTaGCCATCAGAGGGGGAATCA +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQLSTPH*PSEGES
Trigger: TGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAA...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCCATATCCTTTTTGTGTaGTGTCACCTTCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCHILFV*CHLPTA
Trigger: AGCTGTCGGAAGGTGACATCACACAAAAAGGATATG...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280886.12
CDS-3UTR TCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTACGGCGGCCAGTTCGTaGCCACGCCCAGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPTAASS*PRPAAL
Trigger: GAGAGCAGCTGGGCGTGGTCACGAACTGGCCGCCGT...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTTACTTTGGAAGACATTaGGAAATGCATCGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSYFGRH*EMHRKK
Trigger: CTTCTTGCGATGCATTTCTCAATGTCTTCCAAAGTA...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCGCGTCCATCGAGGTCTaGACGACCAGGGACCTGCGT +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLASIEV*TTRDLR
Trigger: ACGCAGGTCCCTGGTCGTGCAGACCTCGATGGACGC...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTAAGGGTATTGACAAGCTaGTGGATTTTTGCTGACACC +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVRVLTS*WIFADT
Trigger: GGTGTCAGCAAAAATCCAGCAGCTTGTCAATACCCT...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCCGATCTCATCCGTTCTaGACAGCTGAGGAACCCCGT +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVRSHPF*TAEEPR
Trigger: ACGGGGTTCCTCAGCTGTGCAGAACGGATGAGATCG...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCCGTGCCCGTCGCAACTaGACACACACACAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLRARRN*THTQLP
Trigger: GGGGAGCTGTGTGTGTGTGCAGTTGCGACGGGCACG...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGCGTGCCCGTCGCAACTaGACACACACACAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPRARRN*THTQLP
Trigger: GGGGAGCTGTGTGTGTGTGCAGTTGCGACGGGCACG...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGGTCTGTGCTCTCCACTaGAAGACCTCTGAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLVCALH*KTSERN
Trigger: GTTCCTCTCAGAGGTCTTGCAGTGGAGAGCACAGAC...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACGTCCGGGGTGGTCTGTaGTCTCCACTGCAAGACCTC +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHVRGGL*SPLQDL
Trigger: GAGGTCTTGCAGTGGAGAGCACAGACCACCCCGGAC...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGGCCCAGAATACACACTaGAGAGGCACCAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLAQNTH*RGTRGQ
Trigger: TTGTCCTCTGGTGCCTCTGCAGTGTGTATTCTGGGC...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCGAACGACTGTGTGAGTaGGATCCGAGGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVERLCE*DPRPLF
Trigger: GAAGAGAGGCCTCGGATCGCACTCACACAGTCGTTC...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCGGTCCTGAGGTTCCCTaGAAGCAAATCGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVGPEVP*KQIARF
Trigger: GAACCTGGCGATTTGCTTGCAGGGAACCTCAGGACC...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATATGGCGCTCTCCATTTaGATCTGTGAGCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHMALSI*ICELSS
Trigger: AGAACTGAGCTCACAGATGCAAATGGAGAGCGCCAT...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGAGGGCTCCTGCGGTCTaGGACTGCTGGCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPRAPAV*DCWQQQ
Trigger: CTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCT...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTCATCTACATTTGTTTTaGTTCCTGACTTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSHLHLF*FLTSAG
Trigger: TCCAGCTGAAGTCAGGAAGCAAAACAAATGTAGATG...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACTCTTGCGGCAAAGCTTaGTCCACCCTCGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHSCGKA*STLGGC
Trigger: GCAGCCTCCGAGGGTGGACCAAGCTTTGCCGCAAGA...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGTTGGCCAGAGCCGCCTaGACAGCTTCCGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPLARAA*TASVWT
Trigger: CGTCCACACGGAAGCTGTCCAGGCGGCTCTGGCCAA...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCCTGTCCGGGACCCCGTaGAACCCTGCGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVLSGTP*NPAVSP
Trigger: TGGAGAGACCGCAGGGTTCCACGGGGTCCCGGACAG...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCGCGCCTTGGGCGAGATaGTGCCCCACCTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVAPWAR*CPTSAV
Trigger: CACTGCAGAGGTGGGGCACCATCTCGCCCAAGGCGC...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCCCCCGGAGCTTGTCATaGGAAACACCTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSPRSLS*ETPQRC
Trigger: ACACCTTTGAGGTGTTTCCCATGACAAGCTCCGGGG...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACGGATGTGGTCCGGGGTaGTCTGTGCTCTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHGCGPG*SVLSTA
Trigger: TGCAGTGGAGAGCACAGACCACCCCGGACCACATCC...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCCACTCTCACCACAAATaGCTGTATTCTGGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCHSHHK*LYSGEC
Trigger: ACACTCACCAGAATACAGCCATTTGTGGTGAGAGTG...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGGCAGAGAGGAGAGGTTaGTGTCTCTCTGATCTCTGT +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLAERRG*CLSDLC
Trigger: ACAGAGATCAGAGAGACATCAACCTCTCCTCTCTGC...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTGGGAACTGTGCTCACTaGGCGAGGGAGCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPGNCAH*AREPQR
Trigger: CCTCTGGGGCTCCCTCGCTCAGTGAGCACAGTTCCC...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCTTACACGGTTTTGTCTaGCTTCAAAAGCACAAGGTC +
Preference number: 4 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCLHGFV*LQKHKV
Trigger: GACCTTGTGCTTTTGAAGTCAGACAAAACCGTGTAA...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTGAATCTGCTCCTGTTTaGTTAGGTCTGTGTTTATAT +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSESAPV*LGLCLY
Trigger: ATATAAACACAGACCTAATCAAACAGGAGCAGATTC...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTCTAATTTGTGTAGAATaGTGTAAGCGACCTTCATAC +
Preference number: 4 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSLICVE*CKRPSY
Trigger: GTATGAAGGTCGCTTACAGCATTCTACACAAATTAG...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATGGCAGAGAAAGACGCTaGCCACAACATAATGAAAGA +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHGRERR*PQHNER
Trigger: TCTTTCATTATGTTGTGGGCAGCGTCTTTCTCTGCC...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGGGCAGAGAAAGACGCTaGCCACAACATAATGAAAGA +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESGRERR*PQHNER
Trigger: TCTTTCATTATGTTGTGGGCAGCGTCTTTCTCTGCC...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTAGGTGGTGGACGTGGTaGAGCCGTGGATGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPRWWTW*SRGWPG
Trigger: GCCAGGCCATCCACGGCTCCACCACGTCCACCACCT...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGTTTGGAAGTCCTTTATaGCAGGCGTCACTAGTCAAG +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELFGSPL*QASLVK
Trigger: CTTGACTAGTGACGCCTGCCATAAAGGACTTCCAAA...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATAAACCACAGCAGCTTTaGCCAACCTTTAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHKPQQL*PTFKLW
Trigger: CCACAGTTTAAAGGTTGGCCAAAGCTGCTGTGGTTT...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTATTTGTTTCTGATAAATaGATCCCACCAAGCGGGGTT +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVFVSDK*IPPSGV
Trigger: AACCCCGCTTGGTGGGATCCATTTATCAGAAACAAA...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTCCGCCGCCGCCTCCCTaGACCGCAGCAACTTACAGA +
Preference number: 4 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFPPPPP*TAATYR
Trigger: TCTGTAAGTTGCTGCGGTCCAGGGAGGCGGCGGCGG...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTGCGAGCCCAGCCCCTTaGTGCACAGCTCCATCACGG +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPASPAP*CTAPSR
Trigger: CCGTGATGGAGCTGTGCACCAAGGGGCTGGGCTCGC...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGTCCGTAACGCTTTTATaGGCTCTGATGACCGAGGTC +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLSVTLL*ALMTEV
Trigger: GACCTCGGTCATCAGAGCCCATAAAAGCGTTACGGA...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGATGCTCCTTCTTGGTTaGACACCGTGGGCCAATTCA +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLMLLLG*TPWANS
Trigger: TGAATTGGCCCACGGTGTCCAACCAAGAAGGAGCAT...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCAATGGTTTGTGGAGATaGAAGGATGCACCACATATG +
Preference number: 4 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCNGLWR*KDAPHM
Trigger: CATATGTGGTGCATCCTTCCATCTCCACAAACCATT...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGAGGGACCATCTCCCTTaGGTAAAGTGTCAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLRDHLP*VKCQAG
Trigger: TCCTGCTTGACACTTTACCCAAGGGAGATGGTCCCT...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACTTTTCTATGTGGGTCTaGGCCATGACGTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHFSMWV*AMTSAS
Trigger: GCTGGCGGACGTCATGGCTCAGACCCACATAGAAAA...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCAGTCTTGAGTTGAAGTaGTCTGACTGGAGGGATTCG +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSSLELK*SDWRDS
Trigger: CGAATCCCTCCAGTCAGATCACTTCAACTCAAGACT...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCCACACACGCCACTTTTaGTTTGTACTGGCAGACCTT +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSHTRHF*FVLADL
Trigger: AAGGTCTGCCAGTACAAAGCAAAAGTGGCGTGTGTG...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAAGCTACTAATGCCCAATaGATATCCCTCGATTTCACA +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQATNAQ*ISLDFT
Trigger: TGTGAAATCGAGGGATATGCATTGGGCATTAGTAGC...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACCGATCTCATCCGTTCTaGACAGCTGAGGAACCCCGT +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHRSHPF*TAEEPR
Trigger: ACGGGGTTCCTCAGCTGTGCAGAACGGATGAGATCG...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGCCATAGTAGGACGTaGCCGTCGCAACTGCACACA +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPGHSRT*PSQLHT
Trigger: TGTGTGCAGTTGCGACGGGCACGTCCTACTATGGCC...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGTTTGGGGAGGGTGTTTaGTGGCACCAAGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPFGEGV*WHQGQA
Trigger: TGCCTGGCCTTGGTGCCAGCAAACACCCTCCCCAAA...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCTTGAGGGACTCTGTTTaGGAGCCCAGCCCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLLRDSV*EPSPLV
Trigger: CACCAAGGGGCTGGGCTCGCAAACAGAGTCCCTCAA...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCGAGCCGTGGATGGCCTaGCTGATCCAGTGCTCCATA +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLEPWMA*LIQCSI
Trigger: TATGGAGCACTGGATCAGCCAGGCCATCCACGGCTC...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGGTATTGACAAGCTGCTaGATTTTTGCTGACACCCGG +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLVLTSC*IFADTR
Trigger: CCGGGTGTCAGCAAAAATCCAGCAGCTTGTCAATAC...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCAGAGGGGCTTCCCGTTaGTGTCCATGGTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVRGASR*CPWWSG
Trigger: GCCTGACCACCATGGACACCAACGGGAAGCCCCTCT...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCTCCCGTTGGGCTTTTTaGAAGTCCTTTATGGCAGGC +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVSRWAF*KSFMAG
Trigger: GCCTGCCATAAAGGACTTCCAAAAAGCCCAACGGGA...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGTGGGATCTCTCCCGTTaGGCTTTTTGGAAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLWDLSR*AFWKSF
Trigger: AAAGGACTTCCAAAAAGCCCAACGGGAGAGATCCCA...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACAACTGTCCTCTTCCGTaGAGTCAGGCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHNCPLP*SQASAQ
Trigger: CTGAGCAGAGGCCTGACTCCACGGAAGAGGACAGTT...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCCACCAAGCGGGGTTTTaGGGAGGGTGTTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLHQAGF*GGCLLA
Trigger: TGCCAGCAAACACCCTCCCCAAAACCCCGCTTGGTG...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCGGGACGGACGGTTATTaGCACACAGCCTGCGTACAG +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLGTDGY*HTACVQ
Trigger: CTGTACGCAGGCTGTGTGCCAATAACCGTCCGTCCC...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACCAAGGTTTGCAGATCTaGGCAGGCCGCTTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHQGLQI*AGRFFG
Trigger: GCCAAAGAAGCGGCCTGCCCAGATCTGCAAACCTTG...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGATATGCAAGAGTGTCTaGGTTGCAAGGTTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELICKSV*VARFAD
Trigger: ATCTGCAAACCTTGCAACCCAGACACTCTTGCATAT...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCGGTCCTTTTGTTTCTaGGTTGGCAATTATAATCCG +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHRSFCF*VGNYNP
Trigger: CGGATTATAATTGCCAACCCAGAAACAAAAGGACCG...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGCGGTCCTTTTGTTTCTaGGTTGGCAATTATAATCCG +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESRSFCF*VGNYNP
Trigger: CGGATTATAATTGCCAACCCAGAAACAAAAGGACCG...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGTTGGAAGGTGCTATTTaGAAGGTTTTCTCGTACCTC +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESLEGAI*KVFSYL
Trigger: GAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAA...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATATCATCAGCACACGCTaGCATAAACACATTCACTGT +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHIISTR*HKHIHC
Trigger: ACAGTGAATGTGTTTATGCCAGCGTGTGCTGATGAT...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGATCATCAGCACACGCTaGCATAAACACATTCACTGT +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESIISTR*HKHIHC
Trigger: ACAGTGAATGTGTTTATGCCAGCGTGTGCTGATGAT...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATGAATCAAATGGTTTGTaGAGATGGAAGGATGCACCA +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHESNGL*RWKDAP
Trigger: TGGTGCATCCTTCCATCTCCACAAACCATTTGATTC...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCTTCATAGTCAGTGCCTaGCCTGAAGCCCCAAACCTA +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVFIVSA*PEAPNL
Trigger: TAGGTTTGGGGCTTCAGGCCAGGCACTGACTATGAA...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACCTGTATCGAGTGCTCTaGGGTGTACGTGGTTACGTC +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHLYRVL*GVRGYV
Trigger: GACGTAACCACGTACACCTCAGAGCACTCGATACAG...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCCGACATCCTGCACGGTaGGCACGGACAGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVRHPAR*ARTASL
Trigger: AAGAGAAGCTGTCCGTGCTCACCGTGCAGGATGTCG...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCAATCTCTCCAAGGTGTaGGTCCCCCAGCGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLNLSKV*VPQRSF
Trigger: AAAGGACCGCTGGGGGACTCACACCTTGGAGAGATT...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTATCTTCAGCACATTTCTaGCAAAGAAAGCTGCTATTA +
Preference number: 4 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVSSAHF*QRKLLL
Trigger: TAATAGCAGCTTTCTTTGTCAGAAATGTGCTGAAGA...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTTGCACAGGTGAGCTCTaGGAAGGTGTGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPCTGEL*EGVARS
Trigger: GCTCCTGGCCACACCTTCTCAGAGCTCACCTGTGCA...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCGGCTGGTTGAGTACATaGGTTTCTCTAACCAGTCAC +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVGWLST*VSLTSH
Trigger: GTGACTGGTTAGAGAAACTCATGTACTCAACCAGCC...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCGTGGAGTCAGGCCTCTaGTCAGCCACGATCACGATC +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVVESGL*SATITI
Trigger: GATCGTGATCGTGGCTGAGCAGAGGCCTGACTCCAC...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACATACTGTCAATCGCCTaGAGCACACGGCTCATCCAC +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHILSIA*STRLIH
Trigger: GTGGATGAGCCGTGTGCTGCAGGCGATTGACAGTAT...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCGGGCCGATTTCTGGCTaGTTCTGTCGAGGCTTAGGC +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVGPISG*FCRGLG
Trigger: GCCTAAGCCTCGACAGAAGCAGCCAGAAATCGGCCC...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTTCTGACCCAGGTCTCTaGCACTGGCCTGGGCGATTC +
Preference number: 4 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFSDPGL*HWPGRF
Trigger: GAATCGCCCAGGCCAGTGGCAGAGACCTGGGTCAGA...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCGAACAGGAACTTGCGTaGCTGGTCGTTATCTTCGAT +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVEQELA*LVVIFD
Trigger: ATCGAAGATAACGACCAGGCACGCAAGTTCCTGTTC...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGGCAACCATAAAACGCTaGTATCAGGTCTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLATIKR*YQVYSW
Trigger: CCAGGAATAGACCTGATAGCAGCGTTTTATGGTTGC...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCCCTGCGGTCTGCGACTaGTGGCAACAGCAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVPAVCD*WQQQSV
Trigger: TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGG...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATGGCAATAATTTCACTTaGTGGTCTCTGGTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHGNNFT*WSLVLE
Trigger: TTCTAGAACCAGAGACCAGCAAGTGAAATTATTGCC...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAACATCTACATTTGTTTTaGTTCCTGACTTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQHLHLF*FLTSAG
Trigger: TCCAGCTGAAGTCAGGAAGCAAAACAAATGTAGATG...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTTCTTGCGGCAAAGCTTaGTCCACCCTCGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFSCGKA*STLGGC
Trigger: GCAGCCTCCGAGGGTGGACCAAGCTTTGCCGCAAGA...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGCTCTGAGGTGTACGTaGTTACGTCAGGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPALRCT*LRQEVQ
Trigger: CTGCACCTCCTGACGTAACCACGTACACCTCAGAGC...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCCTCCAGGCCGGACCATaGGTTCCTGCTTTGTGCCTA +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVLQAGP*VPALCL
Trigger: TAGGCACAAAGCAGGAACCCATGGTCCGGCCTGGAG...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGCATCTTTAATGTGTaGGAACCAGTCTCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPGIFNV*EPVSGR
Trigger: CCGCCCCGAGACTGGTTCCCACACATTAAAGATGCC...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGCGAAGGCCTTTACTTTaGAAGACATTGAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESRRPLL*KTLRNA
Trigger: TGCATTTCTCAATGTCTTCCAAAGTAAAGGCCTTCG...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAACGAAGGCCTTTACTTTaGAAGACATTGAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQRRPLL*KTLRNA
Trigger: TGCATTTCTCAATGTCTTCCAAAGTAAAGGCCTTCG...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCGGCAGGGCCGATTTCTaGCTGCTTCTGTCGAGGCTT +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVGRADF*LLLSRL
Trigger: AAGCCTCGACAGAAGCAGCCAGAAATCGGCCCTGCC...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACGGCAGGCCGCTTCTTTaGCAAATCATCTGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHGRPLL*QIICVQ
Trigger: CTGGACACAGATGATTTGCCAAAGAAGCGGCCTGCC...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGAACGGCAGAAGGCACTaGTGGCTGCGTGAGACATCT +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPNGRRH*WLRETS
Trigger: AGATGTCTCACGCAGCCACCAGTGCCTTCTGCCGTT...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATTTCGGATCCGGTTGTTaGACTTCTAATAATTCTTCA +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHFGSGC*TSNNSS
Trigger: TGAAGAATTATTAGAAGTTCAACAACCGGATCCGAA...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTTCGCACCCCGACAGTTaGGCAGCGTGTAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPSHPDS*AACRGC
Trigger: ACATCCTCTACACGCTGCTCAACTGTCGGGGTGCGA...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGCATTGTGGGCACTGTaGACCCAAATCTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPALWAL*TQISPR
Trigger: CCTTGGAGAGATTTGGGTTCACAGTGCCCACAATGC...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCAACTTAGTCTTGAGTTaGAGTGATCTGACTGGAGGG +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVNLVLS*SDLTGG
Trigger: CCCTCCAGTCAGATCACTTCAACTCAAGACTAAGTT...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGATGGCTGTATTCTGGTaGGTGTTGCCCTGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPMAVFW*VLPCVC
Trigger: GCAGACACAGGGCAACACTCACCAGAATACAGCCAT...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGGTGCACATTGAGCTTTaGATTCTTTTGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLVHIEL*ILLPSL
Trigger: CAAGGATGGCAAAAGAATTCAAAGCTCAATGTGCAC...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGATTTGTTTTGCTTCCTaGCTTCAGCTGGACCTCAAA +
Preference number: 4 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLICFAS*LQLDLK
Trigger: TTTGAGGTCCAGCTGAAGTCAGGAAGCAAAACAAAT...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATGTAGAGTTGATCTGGTaGCAGTTGAAATTATGTTTG +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHVELIW*QLKLCL
Trigger: CAAACATAATTTCAACTGTCACCAGATCAACTCTAC...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGGTAGAGTTGATCTGGTaGCAGTTGAAATTATGTTTG +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESVELIW*QLKLCL
Trigger: CAAACATAATTTCAACTGTCACCAGATCAACTCTAC...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGGAATCTGCTCCTGTTTaGTTAGGTCTGTGTTTATAT +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESESAPV*LGLCLY
Trigger: ATATAAACACAGACCTAATCAAACAGGAGCAGATTC...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCGCCTGGCTGATCCAGTaGTCCATATTGATGCTGCCC +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVAWLIQ*SILMLP
Trigger: GGGCAGCATCAATATGGAGCACTGGATCAGCCAGGC...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGCTAATTTGTGTAGAATaGTGTAAGCGACCTTCATAC +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESLICVE*CKRPSY
Trigger: GTATGAAGGTCGCTTACAGCATTCTACACAAATTAG...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGAGCAAGAAACCTATCTaGTGGCTCCCTGCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPSKKPI*WLPASF
Trigger: GAAGGACGCAGGGAGCCAGCAGATAGGTTTCTTGCT...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTTTTGGGGAGGGTGTTTaGTGGCACCAAGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPFGEGV*WHQGQA
Trigger: TGCCTGGCCTTGGTGCCAGCAAACACCCTCCCCAAA...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCGGCACATTAGGACATTaGAGGGGTGCAGAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVGTLGH*RGAESP
Trigger: AGGGCTCTCTGCACCCCTGCAATGTCCTAATGTGCC...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTCAAGTAGCCTGTGCGTaGCCAGATGGTCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPQVACA*PDGLGV
Trigger: GACACCCAGACCATCTGGGCACGCACAGGCTACTTG...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCCATGCCAATCGTGGCTaGTGTGAGAAGTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLHANRG*CEKSSS
Trigger: GGAAGAGGACTTCTCACAGCAGCCACGATTGGCATG...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTCCTGCGGTCTGCGACTaGTGGCAACAGCAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPPAVCD*WQQQSV
Trigger: TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGG...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTCAGCCGGATCATTGTTaGGGAACACCAGTGCCACCC +
Preference number: 4 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFQPDHC*GTPVPP
Trigger: GGGTGGCACTGGTGTTCCCCAACAATGATCCGGCTG...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACCCAACCTTTAAACTGTaGGATCTCTCCCGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHPTFKL*DLSRWA
Trigger: AGCCCAACGGGAGAGATCCCACAGTTTAAAGGTTGG...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCTATAATCCGAACCCCTaGAAGTATCTTTCCCGATTC +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSYNPNP*KYLSRF
Trigger: GAATCGGGAAAGATACTTCCAGGGGTTCGGATTATA...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCTGTAGGCCACATAGATaGGGTCTAGCTGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLCRPHR*GLAGLP
Trigger: TGGCAGACCAGCTAGACCCCATCTATGTGGCCTACA...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACTTGTCCACTCCACATTaGCCATCAGAGGGGGAATCA +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHLSTPH*PSEGES
Trigger: TGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAA...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCTCCCTTTCAACAAGGTaGGTGGGTGTAGGAAAATGT +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVSLSTR*VGVGKC
Trigger: ACATTTTCCTACACCCACCCACCTTGTTGAAAGGGA...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGTTTTGTTTGAAACTGTaGCTGGTTGAGTACATGAGT +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELFCLKL*LVEYMS
Trigger: ACTCATGTACTCAACCAGCCACAGTTTCAAACAAAA...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATTTTTGTTTGAAACTGTaGCTGGTTGAGTACATGAGT +
Preference number: 4 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHFCLKL*LVEYMS
Trigger: ACTCATGTACTCAACCAGCCACAGTTTCAAACAAAA...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCCTGCTGGATTTTTGCTaGCACCCGGCTACTTACTGG +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVLLDFC*HPATYW
Trigger: CCAGTAAGTAGCCGGGTGTCAGCAAAAATCCAGCAG...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTCCGAGTCCACACGAATaGCCCCATAGGTCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPPSPHE*PHRSVH
Trigger: ATGGACTGACCTATGGGGTCATTCGTGTGGACTCGG...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCGCATTGTGGGCACTGTaGACCCAAATCTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVALWAL*TQISPR
Trigger: CCTTGGAGAGATTTGGGTTCACAGTGCCCACAATGC...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGAGGTGTTCTTGGTCATaGCAGAGAGGCCATAGTAGG +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPRCSWS*QRGHSR
Trigger: CCTACTATGGCCTCTCTGGCATGACCAAGAACACCT...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATATCTAATTGGAAGGTaGTATTTGGAAGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQYLIGR*YLEGFL
Trigger: GAGAAAACCTTCCAAATAGCACCTTCCAATTAGATA...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGAACATACAAGAAGGTTaGTGTCCTTTGCACATAAAA +
Preference number: 4 (lower is better)
Translates to: LTALTTALQRPHSLNVELNIQEG*CPLHIK
Trigger: TTTTATGTGCAAAGGACAGCAACCTTCTTGTATGTT...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTGCCAGAAGAGGTATCTaGAGGGGTGTAGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPARRGI*RGVGVH
Trigger: ATGGACGCCTACACCCCTCCAGATACCTCTTCTGGC...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCCCTCAAAGGTGTTCTTaGTCATGCCAGAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLPQRCS*SCQRGH
Trigger: ATGGCCTCTCTGGCATGACCAAGAACACCTTTGAGG...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCTATCAGGTCTATTCCTaGGGGGTAGACCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVYQVYS*GVDQGH
Trigger: GTGGCCTTGGTCTACCCCCCAGGAATAGACCTGATA...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCGTCTGCACGCTTCAGTaGACACGGAGAACAATGTCT +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLVCTLQ*TRRTMS
Trigger: AGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGAC...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCTTGGAAGGTGCTATTTaGAAGGTTTTCTCGTACCTC +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVLEGAI*KVFSYL
Trigger: GAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAA...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTGCGGTCTGCGACTGCTaGCAACAGCAGAGTGTATGT +
Preference number: 4 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFAVCDC*QQQSVC
Trigger: ACATACACTCTGCTGTTGCCAGCAGTCGCAGACCGC...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTGCAGATGCTCCTTCTTaGTTGGACACCGTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFADAPS*LDTVGQ
Trigger: TTGGCCCACGGTGTCCAACCAAGAAGGAGCATCTGC...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCAATGGTTTGTGGAGATaGAAGGATGCACCACATATG +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVNGLWR*KDAPHM
Trigger: CATATGTGGTGCATCCTTCCATCTCCACAAACCATT...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGATTTCAAGAATCAAATaGTTTGTGGAGATGGAAGGA +
Preference number: 4 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESISRIK*FVEMEG
Trigger: TCCTTCCATCTCCACAAACCATTTGATTCTTGAAAT...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCAGGGACCATCTCCCTTaGGTAAAGTGTCAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLRDHLP*VKCQAG
Trigger: TCCTGCTTGACACTTTACCCAAGGGAGATGGTCCCT...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTCTCCATTTGCATCTGTaGGCTCAGTTCTCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFLHLHL*AQFSAG
Trigger: TCCTGCGGAGAACTGAGCTCACAGATGCAAATGGAG...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCTCTTCAGCACATTTCTaGCAAAGAAAGCTGCTATTA +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSSSAHF*QRKLLL
Trigger: TAATAGCAGCTTTCTTTGTCAGAAATGTGCTGAAGA...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTAGCAAGAAACCTATCTaGTGGCTCCCTGCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPSKKPI*WLPASF
Trigger: GAAGGACGCAGGGAGCCAGCAGATAGGTTTCTTGCT...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCAGAGGAACAGGAACTTaGGTGCCTGGTCGTTATCTT +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLRGTGT*VPGRYL
Trigger: AAGATAACGACCAGGCACGCAAGTTCCTGTTCCTCT...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGCTGAAGTCGAGATATaGAAGAGTGTCTGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPAEVEI*KSVWVA
Trigger: TGCAACCCAGACACTCTTGCATATCTCGACTTCAGC...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCGCTGAAGTCGAGATATaGAAGAGTGTCTGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLAEVEI*KSVWVA
Trigger: TGCAACCCAGACACTCTTGCATATCTCGACTTCAGC...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCATCAGGATGGACTGGTaGCCAGAATACACACTGCAG +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVIRMDW*PEYTLQ
Trigger: CTGCAGTGTGTATTCTGGGCACCAGTCCATCCTGAT...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACGAAAACAGTGCTATTTaGCAACCTAAAGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHENSAI*QPKAPQ
Trigger: CTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCCCAGCACATTCACAATaGTTTCAGCTTCCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLPAHSQ*FQLPCS
Trigger: GCTACACGGAAGCTGAAACCATTGTGAATGTGCTGG...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTGGGATCAGGATGGACTaGTGCCCAGAATACACACTG +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPGIRMD*CPEYTL
Trigger: CAGTGTGTATTCTGGGCACCAGTCCATCCTGATCCC...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCTCCGTAACGCTTTTATaGGCTCTGATGACCGAGGTC +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVSVTLL*ALMTEV
Trigger: GACCTCGGTCATCAGAGCCCATAAAAGCGTTACGGA...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCATGCTCCTTCTTGGTTaGACACCGTGGGCCAATTCA +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVMLLLG*TPWANS
Trigger: TGAATTGGCCCACGGTGTCCAACCAAGAAGGAGCAT...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTCAGTTGTGGACACGCTaGAGTCGAGATATGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPQLWTR*SRDMQE
Trigger: CTCTTGCATATCTCGACTTCAGCGTGTCCACAACTG...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACCATATCCTTTTTGTGTaGTGTCACCTGCAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHHILFV*CHLQEK
Trigger: CTTCTCTTGCAGGTGACATCACACAAAAAGGATATG...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381496.7
CDS-3UTR GCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGCAACCATAAAACGCTaGTATCAGGTCTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPATIKR*YQVYSW
Trigger: CCAGGAATAGACCTGATAGCAGCGTTTTATGGTTGC...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGTATTGGCACACAGCCTaGGTACAGGCAACCATAAAA +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPYWHTA*VQATIK
Trigger: TTTTATGGTTGCCTGTACGCAGGCTGTGTGCCAATA...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCGAAAACAGTGCTATTTaGCAACCTAAAGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLENSAI*QPKAPQ
Trigger: CTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCAGATCATCTACATTTTaGCCAGCATCAATCTTAGTC +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVRSSTF*PASILV
Trigger: GACTAAGATTGATGCTGGGCAAAATGTAGATGATCT...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCAACATACAAGAAGGTTaGTGTCCTTTGCACATAAAA +
Preference number: 4 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSNIQEG*CPLHIK
Trigger: TTTTATGTGCAAAGGACAGCAACCTTCTTGTATGTT...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCGTATTGACAAGCTGCTaGATTTTTGCTGACACCCGG +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVVLTSC*IFADTR
Trigger: CCGGGTGTCAGCAAAAATCCAGCAGCTTGTCAATAC...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTTCCCGTTGGGCTTTTTaGAAGTCCTTTATGGCAGGC +
Preference number: 4 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFSRWAF*KSFMAG
Trigger: GCCTGCCATAAAGGACTTCCAAAAAGCCCAACGGGA...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTCCTCAAAGGTGTTCTTaGTCATGCCAGAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFPQRCS*SCQRGH
Trigger: ATGGCCTCTCTGGCATGACCAAGAACACCTTTGAGG...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTTTTGTGACGCAGGTGTaGGGGCACATTAGGACATTG +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPFVTQV*GHIRTL
Trigger: CAATGTCCTAATGTGCCCCCACACCTGCGTCACAAA...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACTATAATCCGAACCCCTaGAAGTATCTTTCCCGATTC +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHYNPNP*KYLSRF
Trigger: GAATCGGGAAAGATACTTCCAGGGGTTCGGATTATA...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCAACAACAATCAGCCTTaGATCTCAGAAGTCAAACAA +
Preference number: 4 (lower is better)
Translates to: CLHASVDTENNVYISRKVNNNQP*ISEVKQ
Trigger: TTGTTTGACTTCTGAGATCCAAGGCTGATTGTTGTT...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR CAA 72 bp CATTCTATACTAACTTCGAAGGCCGTATACCAGCCTTaGTTTCTTCAGCACATTTCTGACAAAGAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: HSILTSKAVYQP*FLQHISDKESC
Trigger: GCAGCTTTCTTTGTCAGAAATGTGCTGAAGAAACAAAGGCTGGTATACGGCCTTCGAAGTTAGTATAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCAGGTTGATGTCTCTCTaGTCTCTGTGTGCTACTAAT +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLRLMSL*SLCATN
Trigger: ATTAGTAGCACACAGAGATCAGAGAGACATCAACCT...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTAGTCTTGAGTTGAAGTaGTCTGACTGGAGGGATTCG +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPSLELK*SDWRDS
Trigger: CGAATCCCTCCAGTCAGATCACTTCAACTCAAGACT...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCAACTTAGTCTTGAGTTaGAGTGATCTGACTGGAGGG +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVNLVLS*SDLTGG
Trigger: CCCTCCAGTCAGATCACTTCAACTCAAGACTAAGTT...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCGTGCACATTGAGCTTTaGATTCTTTTGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLVHIEL*ILLPSL
Trigger: CAAGGATGGCAAAAGAATTCAAAGCTCAATGTGCAC...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTGAACAGGAACTTGCGTaGCTGGTCGTTATCTTCGAT +
Preference number: 4 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFEQELA*LVVIFD
Trigger: ATCGAAGATAACGACCAGGCACGCAAGTTCCTGTTC...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCTATTGGCACACAGCCTaGGTACAGGCAACCATAAAA +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVYWHTA*VQATIK
Trigger: TTTTATGGTTGCCTGTACGCAGGCTGTGTGCCAATA...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTGCCTGTCCTTATGAATaGGTATTCACTGATCGGAGC +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPACPYE*VFTDRS
Trigger: GCTCCGATCAGTGAATACCCATTCATAAGGACAGGC...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCATATGCAAGAGTGTCTaGGTTGCAAGGTTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLICKSV*VARFAD
Trigger: ATCTGCAAACCTTGCAACCCAGACACTCTTGCATAT...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGAATCAAATGGTTTGTaGAGATGGAAGGATGCACCA +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPESNGL*RWKDAP
Trigger: TGGTGCATCCTTCCATCTCCACAAACCATTTGATTC...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTCCAGTCACCACACTCTaGAATAACGCTGCTAACATT +
Preference number: 4 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFPVTTL*NNAANI
Trigger: AATGTTAGCAGCGTTATTTCAGAGTGTGGTGACTGG...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp ACAAGAACATATTGCCATTTCCTATTAAGAATACAGAACCGTGCTCAACACTCCTTTATCTTCTCCTACTaGGCGTACTCCTTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: TRTYCHFLLRIQNRAQHSFIFSY*AYSFLV
Trigger: TACAAGGAAGGAGTACGCTCAGTAGGAGAAGATAAA...GGAGTGTTGAGCACGGTTCTGTATTCTTAATAGGAAATGGCAATATGTTCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS-3UTR GCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTAGGGTATTGACAAGCTaGTGGATTTTTGCTGACACC +
Preference number: 4 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFRVLTS*WIFADT
Trigger: GGTGTCAGCAAAAATCCAGCAGCTTGTCAATACCCT...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTACATCTTTCTCGGAGTaGAGATGCTCCTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPTSFSE*RCSFLV
Trigger: AACCAAGAAGGAGCATCTGCACTCCGAGAAAGATGT...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACAGATCATCTACATTTTaGCCAGCATCAATCTTAGTC +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHRSSTF*PASILV
Trigger: GACTAAGATTGATGCTGGGCAAAATGTAGATGATCT...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTACCTCAAAGCTGTCCTaGACACTGCAGCTAATGTTT +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPTSKLS*TLQLMF
Trigger: AAACATTAGCTGCAGTGTGCAGGACAGCTTTGAGGT...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACTGTACCCTCTTTTTGTaGAAGTTGATTACACGGTTT +
Preference number: 4 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHCTLFL*KLITRF
Trigger: AAACCGTGTAATCAACTTGCACAAAAAGAGGGTACA...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTAAACCACAGCAGCTTTaGCCAACCTTTAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPKPQQL*PTFKLW
Trigger: CCACAGTTTAAAGGTTGGCCAAAGCTGCTGTGGTTT...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTACTTTTGCTTTGTACTaGCAGACCTTCTGGATCCAG +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPTFALY*QTFWIQ
Trigger: CTGGATCCAGAAGGTCTGCCAGTACAAAGCAAAAGT...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTACTTTTGCTTTGTACTaGCAGACCTTCTGGATCCAG +
Preference number: 4 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFTFALY*QTFWIQ
Trigger: CTGGATCCAGAAGGTCTGCCAGTACAAAGCAAAAGT...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTCACTCTCACCACAAATaGCTGTATTCTGGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPHSHHK*LYSGEC
Trigger: ACACTCACCAGAATACAGCCATTTGTGGTGAGAGTG...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTTCCCTTTCAACAAGGTaGGTGGGTGTAGGAAAATGT +
Preference number: 4 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFSLSTR*VGVGKC
Trigger: ACATTTTCCTACACCCACCCACCTTGTTGAAAGGGA...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTAGGTTGATGTCTCTCTaGTCTCTGTGTGCTACTAAT +
Preference number: 4 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFRLMSL*SLCATN
Trigger: ATTAGTAGCACACAGAGATCAGAGAGACATCAACCT...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR TCA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCTACTTTGGAAGACATTaGGAAATGCATCGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: CPQHNERSSTFCPASILVYFGRH*EMHRKK
Trigger: CTTCTTGCGATGCATTTCTCAATGTCTTCCAAAGTA...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp AGCGGTCATATTGACAGAATTGTCTTCTGCACAAGAACATATTGCCATTTCCTAATTCTGTCCCTTTCCTaGGCTGTTTTTCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: SGHIDRIVFCTRTYCHFLILSLS*AVFLSS
Trigger: AGATGAAAGAAAAACAGCGCAGGAAAGGGACAGAAT...TAGGAAATGGCAATATGTTCTTGTGCAGAAGACAATTCTGTCAATATGACCGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS-3UTR CCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTTTTGTTTCTGATAAATaGATCCCACCAAGCGGGGTT +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPFVSDK*IPPSGV
Trigger: AACCCCGCTTGGTGGGATCCATTTATCAGAAACAAA...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCCTGCTATTATCTAATTaGAAGGTGCTATTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLLLLSN*KVLFGR
Trigger: CCTTCCAAATAGCACCTTCCAATTAGATAATAGCAG...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGCTGCTATTATCTAATTaGAAGGTGCTATTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPLLLSN*KVLFGR
Trigger: CCTTCCAAATAGCACCTTCCAATTAGATAATAGCAG...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGAACAACAATCAGCCTTaGATCTCAGAAGTCAAACAA +
Preference number: 4 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPNNNQP*ISEVKQ
Trigger: TTGTTTGACTTCTGAGATCCAAGGCTGATTGTTGTT...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR CAA 72 bp AGGTCTGTGTTTATATGTTCACTGTGTACCCTCTTTTaGTGCAAGTTGATTACACGGTTTTGTCTGACTTCA +
Preference number: 4 (lower is better)
Translates to: RSVFICSLCTLF*CKLITRFCLTS
Trigger: TGAAGTCAGACAAAACCGTGTAATCAACTTGCACAAAAAGAGGGTACACAGTGAACATATAAACACAGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCTATCTAATTGGAAGGTaGTATTTGGAAGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: ALNSFAILEMAIISLAGLYLIGR*YLEGFL
Trigger: GAGAAAACCTTCCAAATAGCACCTTCCAATTAGATA...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTGGCAATAATTTCACTTaGTGGTCTCTGGTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPGNNFT*WSLVLE
Trigger: TTCTAGAACCAGAGACCAGCAAGTGAAATTATTGCC...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR GCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTGAAGACATTGAGAAATaGATCGCAAGAAGAAATAGA +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPEDIEK*IARRNR
Trigger: TCTATTTCTTCTTGCGATGCATTTCTCAATGTCTTC...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTATTTCAAGAATCAAATaGTTTGTGGAGATGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPISRIK*FVEMEG
Trigger: TCCTTCCATCTCCACAAACCATTTGATTCTTGAAAT...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CCA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTATGTACAAAGCGTACTaGTGGTTTAACATACAAGAA +
Preference number: 4 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFMYKAY*WFNIQE
Trigger: TTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
3UTR CAA 72 bp AAAGAAAGCTGCTATTATCTAATTGGAAGGTGCTATTaGGAAGGTTTTCTCGTACCTCAAACTTTCCTAAAA +
Preference number: 4 (lower is better)
Translates to: KESCYYLIGRCY*EGFLVPQTFLK
Trigger: TTTTAGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAATAGCAGCTTTCTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS TCA 90 bp TGCCCCACCTCTGCAGTGCGGCCTCCAGCGACGGCGGCCAGTTCGTaGCCACGCCCAGCTGCTCTCCGCGCATGGCCAGCATCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: CPTSAVRPPATAASS*PRPAALRAWPASGP
Trigger: GGGCCCAGATGCTGGCCATGCGCGGAGAGCAGCTGGGCGTGGTCACGAACTGGCCGCCGTCGCTGGAGGCCGCACTGCAGAGGTGGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 90 bp AGTGCGGCCTCCAGCGACGGCGGCCAGTTCGTGACCACGCCCAGCTaGTCTCCGCGCATGGCCAGCATCTGGGCCCCCTCCGGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: SAASSDGGQFVTTPS*SPRMASIWAPSGFG
Trigger: ACCAAAGCCGGAGGGGGCCCAGATGCTGGCCATGCGCGGAGAGCAGCTGGGCGTGGTCACGAACTGGCCGCCGTCGCTGGAGGCCGCACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 90 bp ATGGTGGTCAGGCAGGGCGCCTTGGGCGAGATGGTGCCCCACCTCTaGAGTGCGGCCTCCAGCGACGGCGGCCAGTTCGTGACCACGCCC +
Preference number: 5 (lower is better)
Translates to: MVVRQGALGEMVPHL*SAASSDGGQFVTTP
Trigger: GGGCGTGGTCACGAACTGGCCGCCGTCGCTGGAGGCCGCACTGCAGAGGTGGGGCACCATCTCGCCCAAGGCGCCCTGCCTGACCACCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CCA 90 bp AGAGGGGCTTCCCGTTGGTGTCCATGGTGGTCAGGCAGGGCGCCTTaGGCGAGATGGTGCCCCACCTCTGCAGTGCGGCCTCCAGCGACG +
Preference number: 5 (lower is better)
Translates to: RGASRWCPWWSGRAP*ARWCPTSAVRPPAT
Trigger: CGTCGCTGGAGGCCGCACTGCAGAGGTGGGGCACCATCTCGCCCAAGGCGCCCTGCCTGACCACCATGGACACCAACGGGAAGCCCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CCA 90 bp ACCCGCTCCCGAGCCGCAGCTTCTCGGACGTCGCACACCCCGATGTaGGCAGAGCGGAATGTTCTCCTCGGCGCTCCTTCACTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: TRSRAAASRTSHTPM*AERNVLLGAPSLCC
Trigger: GCAGCACAGTGAAGGAGCGCCGAGGAGAACATTCCGCTCTGCCCACATCGGGGTGTGCGACGTCCGAGAAGCTGCGGCTCGGGAGCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634311.1
CDS CCA 90 bp CCACCCCGAAACGAAAGTAAAACAGAGGCCGGTTCCCTGCGGTGCTaGCCACCCGCTCCCGAGCCGCAGCTTCTCGGACGTCGCACACCC +
Preference number: 5 (lower is better)
Translates to: PPRNESKTEAGSLRC*PPAPEPQLLGRRTP
Trigger: GGGTGTGCGACGTCCGAGAAGCTGCGGCTCGGGAGCGGGTGGCCAGCACCGCAGGGAACCGGCCTCTGTTTTACTTTCGTTTCGGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634311.1
CDS TCA 90 bp ACCCTGAAGACCGTCGGCGGTGGTAGCGAGAGGCGGAGGAAGGAGTaGCAGGAGCCCGGCGTTCTTGCGGCAAAGCTTGGTCCACCCTCG +
Preference number: 5 (lower is better)
Translates to: TLKTVGGGSERRRKE*QEPGVLAAKLGPPS
Trigger: CGAGGGTGGACCAAGCTTTGCCGCAAGAACGCCGGGCTCCTGTCACTCCTTCCTCCGCCTCTCGCTACCACCGCCGACGGTCTTCAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS TCA 90 bp ACCCTGAAGACCGTCGGCGGTGGTAGCGAGAGGCGGAGGAAGGAGTaGCAGGAGCCCGGCGTTCTTGCGGCAAAGCTTGGTCCACCCCGA +
Preference number: 5 (lower is better)
Translates to: TLKTVGGGSERRRKE*QEPGVLAAKLGPPR
Trigger: TCGGGGTGGACCAAGCTTTGCCGCAAGAACGCCGGGCTCCTGTCACTCCTTCCTCCGCCTCTCGCTACCACCGCCGACGGTCTTCAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634311.1
CDS GCA 90 bp GAGGTGGTGGACGTGGTGGAGCCGTGGATGGCCTGGCTGATCCAGTaGTCCATATTGATGCTGCCCTGGCTGGAGGTGGGGGTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: EVVDVVEPWMAWLIQ*SILMLPWLEVGVPW
Trigger: CCAGGGCACCCCCACCTCCAGCCAGGGCAGCATCAATATGGAGCACTGGATCAGCCAGGCCATCCACGGCTCCACCACGTCCACCACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 90 bp GGTCCACCCCGAAACGAAAGTAAAACAGAGGCCGGTTCCCTGCGGTaGTGGCCACCCGCTCCCGAGCCGCAGCTTCTCGGACGTCGCACA +
Preference number: 5 (lower is better)
Translates to: GPPRNESKTEAGSLR*WPPAPEPQLLGRRT
Trigger: TGTGCGACGTCCGAGAAGCTGCGGCTCGGGAGCGGGTGGCCAGCACCGCAGGGAACCGGCCTCTGTTTTACTTTCGTTTCGGGGTGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634311.1
CDS GCA 90 bp AGCTTGGTCCACCCCGAAACGAAAGTAAAACAGAGGCCGGTTCCCTaGGGTGCTGGCCACCCGCTCCCGAGCCGCAGCTTCTCGGACGTC +
Preference number: 5 (lower is better)
Translates to: SLVHPETKVKQRPVP*GAGHPLPSRSFSDV
Trigger: GACGTCCGAGAAGCTGCGGCTCGGGAGCGGGTGGCCAGCACCGCAGGGAACCGGCCTCTGTTTTACTTTCGTTTCGGGGTGGACCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634311.1
CDS-3UTR CAA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACACCAGGGACCTGCGTTaGGAAGGCATAGGCACTGCC +
Preference number: 5 (lower is better)
Translates to: QELPGQKLGRTRPQAANDTRDLR*EGIGTA
Trigger: GGCAGTGCCTATGCCTTCCAAACGCAGGTCCCTGGT...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGGCAGCCGGATCATTGTaGGGGAACACCAGTGCCACC +
Preference number: 5 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQAAGSL*GNTSAT
Trigger: GGTGGCACTGGTGTTCCCCAACAATGATCCGGCTGC...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS GCA 90 bp TCGGCGTTGCCGTACTTGGGCGCTGTCCGGGACCCCGTGGAACCCTaGGGTCTCTCCACCTGTATCGAGTGCTCTGAGGTGTACGTGGTT +
Preference number: 5 (lower is better)
Translates to: SALPYLGAVRDPVEP*GLSTCIECSEVYVV
Trigger: AACCACGTACACCTCAGAGCACTCGATACAGGTGGAGAGACCGCAGGGTTCCACGGGGTCCCGGACAGCGCCCAAGTACGGCAACGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS-3UTR CAA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTTCGGCGTTGCCGTACTaGGGCGCTGTCCGGGACCCC +
Preference number: 5 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSSALPY*GAVRDP
Trigger: GGGGTCCCGGACAGCGCCCAAGTACGGCAACGCCGA...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACATGAGGCCATCCATCTaGCCCACCACGAAGACGAGG +
Preference number: 5 (lower is better)
Translates to: QELPGQKLGRTRPQAANDMRPSI*PTTKTR
Trigger: CCTCGTCTTCGTGGTGGGCAAGATGGATGGCCTCAT...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS GCA 90 bp CGAGGTCTGCACGACCAGGGACCTGCGTTTGGAAGGCATAGGCACTaGCATCTTCCGCTCTTTGTGTTTGGCCAGAGCCGCCTGGACAGC +
Preference number: 5 (lower is better)
Translates to: RGLHDQGPAFGRHRH*HLPLFVFGQSRLDS
Trigger: GCTGTCCAGGCGGCTCTGGCCAAACACAAAGAGCGGAAGATGGCAGTGCCTATGCCTTCCAAACGCAGGTCCCTGGTCGTGCAGACCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 90 bp TGGCCCCTCTCCATCAGCATCACGGCGATCTTCTCAGCTCTCTTGTaGAGCTGCACGCAGGTCAGCGAGTTCGCTATCGCACCCCGACAG +
Preference number: 5 (lower is better)
Translates to: WPLSISITAIFSALL*SCTQVSEFAIAPRQ
Trigger: CTGTCGGGGTGCGATAGCGAACTCGCTGACCTGCGTGCAGCTGCACAAGAGAGCTGAGAAGATCGCCGTGATGCTGATGGAGAGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 90 bp ATGTGGGCAGAGCGGAATGTTCTCCTCGGCGCTCCTTCACTGTGCTaGAGTCTACACCGAACCACGGCAGCTCCATTCGCTGTCGGAGGC +
Preference number: 5 (lower is better)
Translates to: MWAERNVLLGAPSLC*SLHRTTAAPFAVGG
Trigger: GCCTCCGACAGCGAATGGAGCTGCCGTGGTTCGGTGTAGACTGCAGCACAGTGAAGGAGCGCCGAGGAGAACATTCCGCTCTGCCCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634311.1
CDS GCA 90 bp CCGATGTGGGCAGAGCGGAATGTTCTCCTCGGCGCTCCTTCACTGTaGTGCAGTCTACACCGAACCACGGCAGCTCCATTCGCTGTCGGA +
Preference number: 5 (lower is better)
Translates to: PMWAERNVLLGAPSL*CSLHRTTAAPFAVG
Trigger: TCCGACAGCGAATGGAGCTGCCGTGGTTCGGTGTAGACTGCAGCACAGTGAAGGAGCGCCGAGGAGAACATTCCGCTCTGCCCACATCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634311.1
CDS CCA 90 bp CAGTGCTCCATATTGATGCTGCCCTGGCTGGAGGTGGGGGTGCCCTaGGAGTCCCCCTGCACTGAGCCTTCATCTTCTGAGCCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: QCSILMLPWLEVGVP*ESPCTEPSSSEPEE
Trigger: CTCTTCTGGCTCAGAAGATGAAGGCTCAGTGCAGGGGGACTCCCAGGGCACCCCCACCTCCAGCCAGGGCAGCATCAATATGGAGCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS-3UTR CAA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTAGTCAGGCAGGGCGCCTaGGGCGAGATGGTGCCCCAC +
Preference number: 5 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVVRQGA*GEMVPH
Trigger: GTGGGGCACCATCTCGCCCAAGGCGCCCTGCCTGAC...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGTGGGATCTCTCCCGTaGGGCTTTTTGGAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: QELPGQKLGRTRPQAANDVGSLP*GFLEVL
Trigger: AAGGACTTCCAAAAAGCCCAACGGGAGAGATCCCAC...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGCACGCCACTTTTGCTTaGTACTGGCAGACCTTCTGG +
Preference number: 5 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQHATFA*YWQTFW
Trigger: CCAGAAGGTCTGCCAGTACAAAGCAAAAGTGGCGTG...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS CCA 90 bp GCCACAAGGCGGGGTTGGTTTCCAGCTCAGAGGGCGGGATCAGGATaGACTGGTGCCCAGAATACACACTGCAGAGGCACCAGAGGACAA +
Preference number: 5 (lower is better)
Translates to: ATRRGWFPAQRAGSG*TGAQNTHCRGTRGQ
Trigger: TTGTCCTCTGGTGCCTCTGCAGTGTGTATTCTGGGCACCAGTCCATCCTGATCCCGCCCTCTGAGCTGGAAACCAACCCCGCCTTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CCA 90 bp CTCGGACTTTGTACTGACTCACGGCAAGAAGCCACAAGGCGGGGTTaGTTTCCAGCTCAGAGGGCGGGATCAGGATGGACTGGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: LGLCTDSRQEATRRG*FPAQRAGSGWTGAQ
Trigger: CTGGGCACCAGTCCATCCTGATCCCGCCCTCTGAGCTGGAAACCAACCCCGCCTTGTGGCTTCTTGCCGTGAGTCAGTACAAAGTCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS-3UTR CAA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTCCACCAAGCGGGGTTTaGGGGAGGGTGTTTGCTGGC +
Preference number: 5 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSPPSGV*GRVFAG
Trigger: GCCAGCAAACACCCTCCCCAAAACCCCGCTTGGTGG...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACCAGCGTCCACACTCCTaGAATGTAGAGTTGATCTGG +
Preference number: 5 (lower is better)
Translates to: QELPGQKLGRTRPQAANDQRPHS*NVELIW
Trigger: CCAGATCAACTCTACATTCAAGGAGTGTGGACGCTG...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS GCA 90 bp CTTGGTCATGCCAGAGAGGCCATAGTAGGACGTGCCCGTCGCAACTaGACACACACACAGCTCCCCGATCTCATCCGTTCTGCACAGCTG +
Preference number: 5 (lower is better)
Translates to: LGHAREAIVGRARRN*THTQLPDLIRSAQL
Trigger: CAGCTGTGCAGAACGGATGAGATCGGGGAGCTGTGTGTGTGTGCAGTTGCGACGGGCACGTCCTACTATGGCCTCTCTGGCATGACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000421992.2
ENST00000634311.1
CDS GCA 90 bp CTCTCCATCAGCATCACGGCGATCTTCTCAGCTCTCTTGTGCAGCTaGACGCAGGTCAGCGAGTTCGCTATCGCACCCCGACAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: LSISITAIFSALLCS*TQVSEFAIAPRQLS
Trigger: GCTCAACTGTCGGGGTGCGATAGCGAACTCGCTGACCTGCGTGCAGCTGCACAAGAGAGCTGAGAAGATCGCCGTGATGCTGATGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CCA 90 bp GAGGCCTCCGGGACCCACGAACCCCAGCAAGCCTGTCCTTATGAATaGGTATTCACTGATCGGAGCCCCGGAGCTTGTCATGGGAAACAC +
Preference number: 5 (lower is better)
Translates to: EASGTHEPQQACPYE*VFTDRSPGACHGKH
Trigger: GTGTTTCCCATGACAAGCTCCGGGGCTCCGATCAGTGAATACCCATTCATAAGGACAGGCTTGCTGGGGTTCGTGGGTCCCGGAGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS-3UTR CAA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTGGGGACGGACGGTTATaGGCACACAGCCTGCGTACA +
Preference number: 5 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSGDGRL*AHSLRT
Trigger: TGTACGCAGGCTGTGTGCCAATAACCGTCCGTCCCC...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS TCA 90 bp ACTGCACACACACACAGCTCCCCGATCTCATCCGTTCTGCACAGCTaGGGAACCCCGTCTGGCTTCACTGAACACATGATGGCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: TAHTHSSPISSVLHS*GTPSGFTEHMMAPG
Trigger: GCCTGGAGCCATCATGTGTTCAGTGAAGCCAGACGGGGTTCCTCAGCTGTGCAGAACGGATGAGATCGGGGAGCTGTGTGTGTGTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000421992.2
ENST00000634311.1
CDS GCA 90 bp CCTCAAAGGTGTTCTTGGTCATGCCAGAGAGGCCATAGTAGGACGTaGCCGTCGCAACTGCACACACACACAGCTCCCCGATCTCATCCG +
Preference number: 5 (lower is better)
Translates to: PQRCSWSCQRGHSRT*PSQLHTHTAPRSHP
Trigger: CGGATGAGATCGGGGAGCTGTGTGTGTGTGCAGTTGCGACGGGCACGTCCTACTATGGCCTCTCTGGCATGACCAAGAACACCTTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 90 bp GCTCAAAGGTGTTCTTGGTCATGCCAGAGAGGCCATAGTAGGACGTaGCCGTCGCAACTGCACACACACACAGCTCCCCGATCTCATCCG +
Preference number: 5 (lower is better)
Translates to: AQRCSWSCQRGHSRT*PSQLHTHTAPRSHP
Trigger: CGGATGAGATCGGGGAGCTGTGTGTGTGTGCAGTTGCGACGGGCACGTCCTACTATGGCCTCTCTGGCATGACCAAGAACACCTTTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421992.2
CDS-3UTR CAA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTTTCCGCTCTTTGTGTTaGGCCAGAGCCGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSFRSLC*ARAAWT
Trigger: TGTCCAGGCGGCTCTGGCCAAACACAAAGAGCGGAA...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATGGGCCCCCTCCGGCTTaGGTTGGTTCGGATCCGGTT +
Preference number: 5 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHGPPPA*VGSDPV
Trigger: AACCGGATCCGAACCAACCAAAGCCGGAGGGGGCCC...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGTACGCAGTGTCGTTATaGGCATCTTTAATGTGTGGG +
Preference number: 5 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQYAVSL*ASLMCG
Trigger: CCCACACATTAAAGATGCCAATAACGACACTGCGTA...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAAAGGAGCCCGGCGTTCTaGCGGCAAAGCTTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQRSPAF*RQSLVH
Trigger: GTGGACCAAGCTTTGCCGCAAGAACGCCGGGCTCCT...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTATCCAGTGCTCCATATaGATGCTGCCCTGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSIQCSI*MLPWLE
Trigger: CTCCAGCCAGGGCAGCATCAATATGGAGCACTGGAT...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATCCATGAGCTCGGCGTaGCCGTACTTGGGCGCTGTC +
Preference number: 5 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQSMSSA*PYLGAV
Trigger: GACAGCGCCCAAGTACGGCAACGCCGAGCTCATGGA...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACTCGAAGGCCTTTACTTaGGAAGACATTGAGAAATGC +
Preference number: 5 (lower is better)
Translates to: QELPGQKLGRTRPQAANDSKAFT*EDIEKC
Trigger: GCATTTCTCAATGTCTTCCAAAGTAAAGGCCTTCGA...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGACGATGTCGTCGGCGTaGTGCCTGCGCCCGCTGACC +
Preference number: 5 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLTMSSA*CLRPLT
Trigger: GGTCAGCGGGCGCAGGCACAACGCCGACGACATCGT...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTAGGGGACGGACGGTTATaGGCACACAGCCTGCGTACA +
Preference number: 5 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVGDGRL*AHSLRT
Trigger: TGTACGCAGGCTGTGTGCCAATAACCGTCCGTCCCC...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATCCAGCCCTCGCGCCTaGAGGGACTCTGTTTGCGAG +
Preference number: 5 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQSSPRA*RDSVCE
Trigger: CTCGCAAACAGAGTCCCTCAAGGCGCGAGGGCTGGA...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCTTCTCCCCACGGGAGTaGATGGGGATGACGCCGATG +
Preference number: 5 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCFSPRE*MGMTPM
Trigger: CATCGGCGTCATCCCCATCAACTCCCGTGGGGAGAA...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TCAACACTCCCACGGCGCACATTCATTCAATATCCACCACGTGTCAGGCCCCGCCACGCTTCAGAAGCCTaGTGGAAAACACCAGCACGC +
Preference number: 5 (lower is better)
Translates to: STLPRRTFIQYPPRVRPRHASEA*WKTPAR
Trigger: GCGTGCTGGTGTTTTCCACAAGGCTTCTGAAGCGTG...GCGGGGCCTGACACGTGGTGGATATTGAATGAATGTGCGCCGTGGGAGTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS-3UTR CAA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGCCCCTCCGGCTTTGGTaGGTTCGGATCCGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LTALTTALQRPHSLNVELPLRLW*VRIRLL
Trigger: CAACAACCGGATCCGAACCAACCAAAGCCGGAGGGG...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAACCCCTCCGGCTTTGGTaGGTTCGGATCCGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQPLRLW*VRIRLL
Trigger: CAACAACCGGATCCGAACCAACCAAAGCCGGAGGGG...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTCAGTCTCGGGGCGGTTaGGAGAGATGTTTAGACTCT +
Preference number: 5 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSQSRGG*ERCLDS
Trigger: AGAGTCTAAACATCTCTCCAAACCGCCCCGAGACTG...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTATCGGAGCCCCGGAGCTaGTCATGGGAAACACCTCAA +
Preference number: 5 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVSEPRS*SWETPQ
Trigger: TTGAGGTGTTTCCCATGACAAGCTCCGGGGCTCCGA...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGGCAATAAACTCCAACTaGATGTATACTGTCAATCGC +
Preference number: 5 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQAINSN*MYTVNR
Trigger: GCGATTGACAGTATACATCAAGTTGGAGTTTATTGC...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATTTTGGGGAGGGTGTTaGCTGGCACCAAGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQFWGGC*LAPRPG
Trigger: GCCTGGCCTTGGTGCCAGCAAACACCCTCCCCAAAA...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCCCACGTAGACAGTGGTaGGGTCAGGTCCTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCPRRQW*GQVLRF
Trigger: GAACCTCAGGACCTGACCCAACCACTGTCTACGTGG...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCAGCTGGAGGACTTCTaGCTTCAGCCGGAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHQLEDF*LQPELW
Trigger: CCAGAGCTCCGGCTGAAGCAAGAAGTCCTCCAGCTG...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGCAGCTGGAGGACTTCTaGCTTCAGCCGGAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESQLEDF*LQPELW
Trigger: CCAGAGCTCCGGCTGAAGCAAGAAGTCCTCCAGCTG...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CAGGAGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACCTCCTTTCCTTTCTCTaGCACAACCAAATTTCAATC +
Preference number: 5 (lower is better)
Translates to: QELPGQKLGRTRPQAANDLLSFL*HNQISI
Trigger: GATTGAAATTTGGTTGTGCAAGAGAAAGGAAAGGAG...GTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGGTTGATTACACGGTTTaGTCTGACTTCAAAAGCACA +
Preference number: 5 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQVDYTV*SDFKST
Trigger: TGTGCTTTTGAAGTCAGACAAAACCGTGTAATCAAC...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS TCA 90 bp GGACCCCGTGGAACCCTGCGGTCTCTCCACCTGTATCGAGTGCTCTaGGGTGTACGTGGTTACGTCAGGAGGTGCAGAATGATTTTCTAT +
Preference number: 5 (lower is better)
Translates to: GPRGTLRSLHLYRVL*GVRGYVRRCRMIFY
Trigger: ATAGAAAATCATTCTGCACCTCCTGACGTAACCACGTACACCTCAGAGCACTCGATACAGGTGGAGAGACCGCAGGGTTCCACGGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS-3UTR CAA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATTCCGCTCTTTGTGTTaGGCCAGAGCCGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQFRSLC*ARAAWT
Trigger: TGTCCAGGCGGCTCTGGCCAAACACAAAGAGCGGAA...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTCAAGCTGCTGGATTTTaGCTGACACCCGGCTACTTA +
Preference number: 5 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSQAAGF*LTPGYL
Trigger: TAAGTAGCCGGGTGTCAGCAAAAATCCAGCAGCTTG...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACGTCAGGCAGGGCGCCTaGGGCGAGATGGTGCCCCAC +
Preference number: 5 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHVRQGA*GEMVPH
Trigger: GTGGGGCACCATCTCGCCCAAGGCGCCCTGCCTGAC...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGTCGGAGCCCCGGAGCTaGTCATGGGAAACACCTCAA +
Preference number: 5 (lower is better)
Translates to: LTALTTALQRPHSLNVELSEPRS*SWETPQ
Trigger: TTGAGGTGTTTCCCATGACAAGCTCCGGGGCTCCGA...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TTCAGAAGCCTTGTGGAAAACACCAGCACGCCAACTCTGTTCTTCATTCTGTCCTCCAGCCCTCGCGCCTaGAGGGACTCTGTTTGCGAG +
Preference number: 5 (lower is better)
Translates to: FRSLVENTSTPTLFFILSSSPRA*RDSVCE
Trigger: CTCGCAAACAGAGTCCCTCAAGGCGCGAGGGCTGGA...GGACAGAATGAAGAACAGAGTTGGCGTGCTGGTGTTTTCCACAAGGCTTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS-3UTR CAA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGCCACGTAGACAGTGGTaGGGTCAGGTCCTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: LTALTTALQRPHSLNVELPRRQW*GQVLRF
Trigger: GAACCTCAGGACCTGACCCAACCACTGTCTACGTGG...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTAGATGCTCCTTCTTGGTaGGACACCGTGGGCCAATTC +
Preference number: 5 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVDAPSW*DTVGQF
Trigger: GAATTGGCCCACGGTGTCCAACCAAGAAGGAGCATC...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AGCTGCCAGGGCAGAAACTGGGGCGCACTCGTCCACAGGCGGCAAACGACGCAGAAGATCATCTACATTTaGCCCAGCATCAATCTTAGT +
Preference number: 5 (lower is better)
Translates to: SCQGRNWGALVHRRQTTQKIIYI*PSINLS
Trigger: ACTAAGATTGATGCTGGGCAAAATGTAGATGATCTT...CTGCGTCGTTTGCCGCCTGTGGACGAGTGCGCCCCAGTTTCTGCCCTGGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCTTCTTGCGGCAAAGCTaGGTCCACCCTCGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSFLRQS*VHPRRL
Trigger: CAGCCTCCGAGGGTGGACCAAGCTTTGCCGCAAGAA...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCTCGGCGTTGCCGTACTaGGGCGCTGTCCGGGACCCC +
Preference number: 5 (lower is better)
Translates to: ALNSFAILEMAIISLAGLSALPY*GAVRDP
Trigger: GGGGTCCCGGACAGCGCCCAAGTACGGCAACGCCGA...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCTCCATGAGCTCGGCGTaGCCGTACTTGGGCGCTGTC +
Preference number: 5 (lower is better)
Translates to: CLHASVDTENNVYISRKVSMSSA*PYLGAV
Trigger: GACAGCGCCCAAGTACGGCAACGCCGAGCTCATGGA...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTAGGTCGTTTCGGTCGTTaGAGGGTATTGACAAGCTGC +
Preference number: 5 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVGRFGR*RVLTSC
Trigger: GCAGCTTGTCAATACCCTCAAACGACCGAAACGACC...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCACCTCAAAGGTGTTCTaGGTCATGCCAGAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCTSKVF*VMPERP
Trigger: TGGCCTCTCTGGCATGACCAAGAACACCTTTGAGGT...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCACCTCCACAATCATCTaGACGGTAGGCAACGTCGTC +
Preference number: 5 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCTSTII*TVGNVV
Trigger: GACGACGTTGCCTACCGTCAAGATGATTGTGGAGGT...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCTTCTCCCCACGGGAGTaGATGGGGATGACGCCGATG +
Preference number: 5 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSFSPRE*MGMTPM
Trigger: CATCGGCGTCATCCCCATCAACTCCCGTGGGGAGAA...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS TCA 90 bp GGTTCGCGCCGTCCGCCACTATCAGCATTCGCAGAGAGGAGAGGTTaGTGTCTCTCTGATCTCTGTGTGCTACTAATGCCCAATGCATAT +
Preference number: 5 (lower is better)
Translates to: GSRRPPLSAFAERRG*CLSDLCVLLMPNAY
Trigger: ATATGCATTGGGCATTAGTAGCACACAGAGATCAGAGAGACATCAACCTCTCCTCTCTGCGAATGCTGATAGTGGCGGACGGCGCGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000421992.2
ENST00000634311.1
CDS GCA 90 bp AGTGTGTCAGCAGCGCAGTCCTCGTCACCGTCACACCCAGCACACTaGCATCCTTACACGTCTTGTACTCAATATACGCAGTGTCGTTAT +
Preference number: 5 (lower is better)
Translates to: SVSAAQSSSPSHPAH*HPYTSCTQYTQCRY
Trigger: ATAACGACACTGCGTATATTGAGTACAAGACGTGTAAGGATGGCAGTGTGCTGGGTGTGACGGTGACGAGGACTGCGCTGCTGACACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 90 bp GATGACCTCCTGTCGAAGGCCTTTACTTTGGAAGACATTGAGAAATaGATCGCAAGAAGAAATAGACCAGGGGTTCGCGCCGTCCGCCAC +
Preference number: 5 (lower is better)
Translates to: DDLLSKAFTLEDIEK*IARRNRPGVRAVRH
Trigger: GTGGCGGACGGCGCGAACCCCTGGTCTATTTCTTCTTGCGATGCATTTCTCAATGTCTTCCAAAGTAAAGGCCTTCGACAGGAGGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000421992.2
ENST00000634311.1
CDS CCA 90 bp AACCCTGCGGTCTCTCCACCTGTATCGAGTGCTCTGAGGTGTACGTaGTTACGTCAGGAGGTGCAGAATGATTTTCTATGTGGGTCTGAG +
Preference number: 5 (lower is better)
Translates to: NPAVSPPVSSALRCT*LRQEVQNDFLCGSE
Trigger: CTCAGACCCACATAGAAAATCATTCTGCACCTCCTGACGTAACCACGTACACCTCAGAGCACTCGATACAGGTGGAGAGACCGCAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CCA 90 bp CGTAAAGGTGGTCGTTTCGGTCGTTTGAGGGTATTGACAAGCTGCTaGATTTTTGCTGACACCCGGCTACTTACTGGTACTCCATCCCCG +
Preference number: 5 (lower is better)
Translates to: RKGGRFGRLRVLTSC*IFADTRLLTGTPSP
Trigger: CGGGGATGGAGTACCAGTAAGTAGCCGGGTGTCAGCAAAAATCCAGCAGCTTGTCAATACCCTCAAACGACCGAAACGACCACCTTTACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS-3UTR CAA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACCGCACGGCCTCCTCTTaGTTCGCAGGCGGAGGTCTC +
Preference number: 5 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHRTASS*FAGGGL
Trigger: GAGACCTCCGCCTGCGAACAAAGAGGAGGCCGTGCG...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280886.12
CDS-3UTR CAA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTACAAGCTGCTGGATTTTaGCTGACACCCGGCTACTTA +
Preference number: 5 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVQAAGF*LTPGYL
Trigger: TAAGTAGCCGGGTGTCAGCAAAAATCCAGCAGCTTG...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACGGGCCCCCTCCGGCTTaGGTTGGTTCGGATCCGGTT +
Preference number: 5 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHGPPPA*VGSDPV
Trigger: AACCGGATCCGAACCAACCAAAGCCGGAGGGGGCCC...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCAAGGCAGCCGGATCATaGTTGGGGAACACCAGTGCC +
Preference number: 5 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSKAAGS*LGNTSA
Trigger: GGCACTGGTGTTCCCCAACAATGATCCGGCTGCCTT...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATACCTCAAAGGTGTTCTaGGTCATGCCAGAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHTSKVF*VMPERP
Trigger: TGGCCTCTCTGGCATGACCAAGAACACCTTTGAGGT...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAAGAGAGGAACAGGAACTaGCGTGCCTGGTCGTTATCT +
Preference number: 5 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQERNRN*RAWSLS
Trigger: AGATAACGACCAGGCACGCAAGTTCCTGTTCCTCTC...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGCCCCCAGCGGTCCTTTaGTTTCTGGGTTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESPPAVL*FLGWQL
Trigger: TAATTGCCAACCCAGAAACAAAAGGACCGCTGGGGG...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCCCCCAGCGGTCCTTTaGTTTCTGGGTTGGCAATTA +
Preference number: 5 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHPPAVL*FLGWQL
Trigger: TAATTGCCAACCCAGAAACAAAAGGACCGCTGGGGG...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCTGCAGATGCTCCTTCTaGGTTGGACACCGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSCRCSF*VGHRGP
Trigger: TGGCCCACGGTGTCCAACCAAGAAGGAGCATCTGCA...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAAAAGGGACCATCTCCCTaGGGTAAAGTGTCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQKGPSP*GKVSSR
Trigger: CCTGCTTGACACTTTACCCAAGGGAGATGGTCCCTT...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GGCGCACATTCATTCAATATCCACCACGTGTCAGGCCCCGCCCTGGTGCCGAGGGTCATATTGACAGAATaGTCTTCTGCACAAGAACAT +
Preference number: 5 (lower is better)
Translates to: GAHSFNIHHVSGPALVPRVILTE*SSAQEH
Trigger: ATGTTCTTGTGCAGAAGACAATTCTGTCAATATGAC...CCTCGGCACCAGGGCGGGGCCTGACACGTGGTGGATATTGAATGAATGTGCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS CCA 90 bp AAGTCGAGATATGCAAGAGTGTCTGGGTTGCAAGGTTTGCAGATCTaGGCAGGCCGCTTCTTTGGCAAATCATCTGTGTCCAGGATGAGG +
Preference number: 5 (lower is better)
Translates to: KSRYARVSGLQGLQI*AGRFFGKSSVSRMR
Trigger: CCTCATCCTGGACACAGATGATTTGCCAAAGAAGCGGCCTGCCCAGATCTGCAAACCTTGCAACCCAGACACTCTTGCATATCTCGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS-3UTR CAA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCACGATGTCGTCGGCGTaGTGCCTGCGCCCGCTGACC +
Preference number: 5 (lower is better)
Translates to: CPQHNERSSTFCPASILVTMSSA*CLRPLT
Trigger: GGTCAGCGGGCGCAGGCACAACGCCGACGACATCGT...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCGGGCAGGCCGCTTCTTaGGCAAATCATCTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSGQAAS*ANHLCP
Trigger: TGGACACAGATGATTTGCCAAAGAAGCGGCCTGCCC...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTCCTTTTGTTTCTGGGTaGGCAATTATAATCCGAACC +
Preference number: 5 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSPFVSG*AIIIRT
Trigger: GGTTCGGATTATAATTGCCAACCCAGAAACAAAAGG...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAACAGCGTCCACACTCCTaGAATGTAGAGTTGATCTGG +
Preference number: 5 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQQRPHS*NVELIW
Trigger: CCAGATCAACTCTACATTCAAGGAGTGTGGACGCTG...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS GCA 90 bp TCTCGTAAAGGTGGTCGTTTCGGTCGTTTGAGGGTATTGACAAGCTaGTGGATTTTTGCTGACACCCGGCTACTTACTGGTACTCCATCC +
Preference number: 5 (lower is better)
Translates to: SRKGGRFGRLRVLTS*WIFADTRLLTGTPS
Trigger: GGATGGAGTACCAGTAAGTAGCCGGGTGTCAGCAAAAATCCAGCAGCTTGTCAATACCCTCAAACGACCGAAACGACCACCTTTACGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 90 bp CAGGCCGGACCATGGGTTCCTGCTTTGTGCCTAATTTGTGTAGAATaGTGTAAGCGACCTTCATACTTCTTGTCCACAGCTTGCCGTAAG +
Preference number: 5 (lower is better)
Translates to: QAGPWVPALCLICVE*CKRPSYFLSTACRK
Trigger: CTTACGGCAAGCTGTGGACAAGAAGTATGAAGGTCGCTTACAGCATTCTACACAAATTAGGCACAAAGCAGGAACCCATGGTCCGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS-3UTR CAA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACGCCATCTTCCGCTCTTaGTGTTTGGCCAGAGCCGCC +
Preference number: 5 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHAIFRS*CLARAA
Trigger: GGCGGCTCTGGCCAAACACAAAGAGCGGAAGATGGC...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AAACTTTTAGACAGGGCTCCTGCGGTCTGCGACTGCTGGCAACAGCAGAGTGTACCATGGGTTCCTGCTTaGTGCCTAATTTGTGTAGAA +
Preference number: 5 (lower is better)
Translates to: KLLDRAPAVCDCWQQQSVPWVPA*CLICVE
Trigger: TTCTACACAAATTAGGCACAAAGCAGGAACCCATGG...TACACTCTGCTGTTGCCAGCAGTCGCAGACCGCAGGAGCCCTGTCTAAAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAATGCTACGCAGTGTCGTTATaGGCATCTTTAATGTGTGGG +
Preference number: 5 (lower is better)
Translates to: EFRTLCPLHIGHQRGNQCYAVSL*ASLMCG
Trigger: CCCACACATTAAAGATGCCAATAACGACACTGCGTA...GCATTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACTTTTGGGGAGGGTGTTaGCTGGCACCAAGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHFWGGC*LAPRPG
Trigger: GCCTGGCCTTGGTGCCAGCAAACACCCTCCCCAAAA...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGCCACCAAGCGGGGTTTaGGGGAGGGTGTTTGCTGGC +
Preference number: 5 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPPPSGV*GRVFAG
Trigger: GCCAGCAAACACCCTCCCCAAAACCCCGCTTGGTGG...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCATCTTCTCAGCTCTCTaGTGCAGCTGCACGCAGGTC +
Preference number: 5 (lower is better)
Translates to: CLHASVDTENNVYISRKVIFSAL*CSCTQV
Trigger: GACCTGCGTGCAGCTGCACAAGAGAGCTGAGAAGAT...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGAGCCACAAGGCGGGGTaGGTTTCCAGCTCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPSHKAG*VSSSEG
Trigger: GCCCTCTGAGCTGGAAACCAACCCCGCCTTGTGGCT...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGTCCAGCCCTCGCGCCTaGAGGGACTCTGTTTGCGAG +
Preference number: 5 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPSSPRA*RDSVCE
Trigger: CTCGCAAACAGAGTCCCTCAAGGCGCGAGGGCTGGA...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CTTAGTCATGCATATCTAGCACCGAGAGCCACTGCGGGGTCACACTGGGGCAGTCTCTTTTTGTGCAAGTaGATTACACGGTTTTGTCTG +
Preference number: 5 (lower is better)
Translates to: LSHAYLAPRATAGSHWGSLFLCK*ITRFCL
Trigger: CAGACAAAACCGTGTAATCAACTTGCACAAAAAGAG...ACTGCCCCAGTGTGACCCCGCAGTGGCTCTCGGTGCTAGATATGCATGACTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGGTGCCGAGGTAAGGACGGTGGCACGCTTCAGAAGCCTTGTGGAAAACACCAGGATTTAGCGGTCATATaGACAGAATTGTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: WCRGKDGGTLQKPCGKHQDLAVI*TELSSA
Trigger: TGCAGAAGACAATTCTGTCAATATGACCGCTAAATC...CTGGTGTTTTCCACAAGGCTTCTGAAGCGTGCCACCGTCCTTACCTCGGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434695.2
CDS TCA 90 bp TCCGCCACTATCAGCATTCGCAGAGAGGAGAGGTTGATGTCTCTCTaGTCTCTGTGTGCTACTAATGCCCAATGCATATCCCTCGATTTC +
Preference number: 5 (lower is better)
Translates to: SATISIRREERLMSL*SLCATNAQCISLDF
Trigger: GAAATCGAGGGATATGCATTGGGCATTAGTAGCACACAGAGATCAGAGAGACATCAACCTCTCCTCTCTGCGAATGCTGATAGTGGCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000421992.2
ENST00000634311.1
CDS-3UTR CAA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGACCAGGGACCTGCGTTaGGAAGGCATAGGCACTGCC +
Preference number: 5 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPTRDLR*EGIGTA
Trigger: GGCAGTGCCTATGCCTTCCAAACGCAGGTCCCTGGT...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGCGACCTTCATACTTCTaGTCCACAGCTTGCCGTAAG +
Preference number: 5 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLRPSYF*STACRK
Trigger: CTTACGGCAAGCTGTGGACAAGAAGTATGAAGGTCG...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAACCATGGGTTCCTGCTTaGTGCCTAATTTGTGTAGAA +
Preference number: 5 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQPWVPA*CLICVE
Trigger: TTCTACACAAATTAGGCACAAAGCAGGAACCCATGG...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGTGAGTTCCGGACACTTTGTCCACTCCACATTGGCCATCAGAGGGGGAATCAACCATCCTTACACGTCTaGTACTCAATATACGCAGTG +
Preference number: 5 (lower is better)
Translates to: CEFRTLCPLHIGHQRGNQPSLHV*YSIYAV
Trigger: CACTGCGTATATTGAGTACAAGACGTGTAAGGATGG...TTGATTCCCCCTCTGATGGCCAATGTGGAGTGGACAAAGTGTCCGGAACTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGCCATCCTTACACGTCTaGTACTCAATATACGCAGTG +
Preference number: 5 (lower is better)
Translates to: LTALTTALQRPHSLNVELPSLHV*YSIYAV
Trigger: CACTGCGTATATTGAGTACAAGACGTGTAAGGATGG...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACCAGGTCCAAGGCTTCTaGTTCCGACCCATCCAGCTC +
Preference number: 5 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHQVQGF*FRPIQL
Trigger: GAGCTGGATGGGTCGGAACAAGAAGCCTTGGACCTG...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATGCCGTATACCAGCCTTaGTTTCTTCAGCACATTTCT +
Preference number: 5 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHAVYQP*FLQHIS
Trigger: AGAAATGTGCTGAAGAAACAAAGGCTGGTATACGGC...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACTGCAGATGCTCCTTCTaGGTTGGACACCGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHCRCSF*VGHRGP
Trigger: TGGCCCACGGTGTCCAACCAAGAAGGAGCATCTGCA...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGCTGTGTACCCTCTTTTaGTGCAAGTTGATTACACGG +
Preference number: 5 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESLCTLF*CKLITR
Trigger: CCGTGTAATCAACTTGCACAAAAAGAGGGTACACAG...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCCGACCTTCATACTTCTaGTCCACAGCTTGCCGTAAG +
Preference number: 5 (lower is better)
Translates to: CLHASVDTENNVYISRKVRPSYF*STACRK
Trigger: CTTACGGCAAGCTGTGGACAAGAAGTATGAAGGTCG...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCGCAGCCGGATCATTGTaGGGGAACACCAGTGCCACC +
Preference number: 5 (lower is better)
Translates to: CPQHNERSSTFCPASILVAAGSL*GNTSAT
Trigger: GGTGGCACTGGTGTTCCCCAACAATGATCCGGCTGC...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGAAGGCAGCCGGATCATaGTTGGGGAACACCAGTGCC +
Preference number: 5 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPKAAGS*LGNTSA
Trigger: GGCACTGGTGTTCCCCAACAATGATCCGGCTGCCTT...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCAGCCCGACGTCCTTCTaGAAATCCAGCACATTCACA +
Preference number: 5 (lower is better)
Translates to: CLHASVDTENNVYISRKVSPTSF*KSSTFT
Trigger: TGTGAATGTGCTGGATTTCAAGAAGGACGTCGGGCT...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCATGAGGCCATCCATCTaGCCCACCACGAAGACGAGG +
Preference number: 5 (lower is better)
Translates to: ALNSFAILEMAIISLAGLMRPSI*PTTKTR
Trigger: CCTCGTCTTCGTGGTGGGCAAGATGGATGGCCTCAT...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACGGGCAGGCCGCTTCTTaGGCAAATCATCTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHGQAAS*ANHLCP
Trigger: TGGACACAGATGATTTGCCAAAGAAGCGGCCTGCCC...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTAGCCACAAGGCGGGGTaGGTTTCCAGCTCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPSHKAG*VSSSEG
Trigger: GCCCTCTGAGCTGGAAACCAACCCCGCCTTGTGGCT...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATATTGGAAGGTGCTATTaGGAAGGTTTTCTCGTACCT +
Preference number: 5 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHIGRCY*EGFLVP
Trigger: AGGTACGAGAAAACCTTCCAAATAGCACCTTCCAAT...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CTAACTGCCCTCACAACTGCACTGCAGCGTCCACACTCCTTGAATGTAGAGTTGACATCTACATTTGTTTaGCTTCCTGACTTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LTALTTALQRPHSLNVELTSTFV*LPDFSW
Trigger: CCAGCTGAAGTCAGGAAGCAAAACAAATGTAGATGT...CAACTCTACATTCAAGGAGTGTGGACGCTGCAGTGCAGTTGTGAGGGCAGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTTTCTTGCGGCAAAGCTaGGTCCACCCTCGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPFLRQS*VHPRRL
Trigger: CAGCCTCCGAGGGTGGACCAAGCTTTGCCGCAAGAA...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTGCCATCTTCCGCTCTTaGTGTTTGGCCAGAGCCGCC +
Preference number: 5 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFAIFRS*CLARAA
Trigger: GGCGGCTCTGGCCAAACACAAAGAGCGGAAGATGGC...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACCAGTCTCGGGGCGGTTaGGAGAGATGTTTAGACTCT +
Preference number: 5 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHQSRGG*ERCLDS
Trigger: AGAGTCTAAACATCTCTCCAAACCGCCCCGAGACTG...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCCAGGTCCAAGGCTTCTaGTTCCGACCCATCCAGCTC +
Preference number: 5 (lower is better)
Translates to: CPQHNERSSTFCPASILVQVQGF*FRPIQL
Trigger: GAGCTGGATGGGTCGGAACAAGAAGCCTTGGACCTG...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGGCCGTATACCAGCCTTaGTTTCTTCAGCACATTTCT +
Preference number: 5 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLAVYQP*FLQHIS
Trigger: AGAAATGTGCTGAAGAAACAAAGGCTGGTATACGGC...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp ATTGGCCATCAGAGGGGGAATCAATGCAACCCAGTGCGAATGACCACAGAATCGTTGTGCAATGAATTCTaGCAGCTAAGAAAACAGTGC +
Preference number: 5 (lower is better)
Translates to: IGHQRGNQCNPVRMTTESLCNEF*QLRKQC
Trigger: GCACTGTTTTCTTAGCTGCAAGAATTCATTGCACAA...CGATTCTGTGGTCATTCGCACTGGGTTGCATTGATTCCCCCTCTGATGGCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATTTGTGCAATGAATTCTaGCAGCTAAGAAAACAGTGC +
Preference number: 5 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHLCNEF*QLRKQC
Trigger: GCACTGTTTTCTTAGCTGCAAGAATTCATTGCACAA...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS CCA 90 bp CTTGTACTCAATATACGCAGTGTCGTTATTGGCATCTTTAATGTGTaGGAACCAGTCTCGGGGCGGTTTGGAGAGATGTTTAGACTCTGT +
Preference number: 5 (lower is better)
Translates to: LVLNIRSVVIGIFNV*EPVSGRFGEMFRLC
Trigger: ACAGAGTCTAAACATCTCTCCAAACCGCCCCGAGACTGGTTCCCACACATTAAAGATGCCAATAACGACACTGCGTATATTGAGTACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS-3UTR CAA 90 bp GAGTGTTGCCCTGTGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATTTACTTTGGAAGACATaGAGAAATGCATCGCAAGAA +
Preference number: 5 (lower is better)
Translates to: ECCPVSARFSGHGEQCLHLLWKT*RNASQE
Trigger: TTCTTGCGATGCATTTCTCAATGTCTTCCAAAGTAA...ATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACACAGGGCAACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GAAAACAGTGCTATTTGCCAACCTAAAGCCCCTCAGTATCATCAGCACACGCTGACATCTACATTTGTTTaGCTTCCTGACTTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: ENSAICQPKAPQYHQHTLTSTFV*LPDFSW
Trigger: CCAGCTGAAGTCAGGAAGCAAAACAAATGTAGATGT...CAGCGTGTGCTGATGATACTGAGGGGCTTTAGGTTGGCAAATAGCACTGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AAATTATGTAAACAGAGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGAGCCCGACGTCCTTCTaGAAATCCAGCACATTCACA +
Preference number: 5 (lower is better)
Translates to: KLCKQSQIHFPVGVTSFPSPTSF*KSSTFT
Trigger: TGTGAATGTGCTGGATTTCAAGAAGGACGTCGGGCT...CGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACTCTGTTTACATAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTATCTTCTCAGCTCTCTaGTGCAGCTGCACGCAGGTC +
Preference number: 5 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFIFSAL*CSCTQV
Trigger: GACCTGCGTGCAGCTGCACAAGAGAGCTGAGAAGAT...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCACCTCCACAATCATCTaGACGGTAGGCAACGTCGTC +
Preference number: 5 (lower is better)
Translates to: CPQHNERSSTFCPASILVTSTII*TVGNVV
Trigger: GACGACGTTGCCTACCGTCAAGATGATTGTGGAGGT...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTGATGCTCCTTCTTGGTaGGACACCGTGGGCCAATTC +
Preference number: 5 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFDAPSW*DTVGQF
Trigger: GAATTGGCCCACGGTGTCCAACCAAGAAGGAGCATC...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCCTCCTTTCCTTTCTCTaGCACAACCAAATTTCAATC +
Preference number: 5 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSLLSFL*HNQISI
Trigger: GATTGAAATTTGGTTGTGCAAGAGAAAGGAAAGGAG...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCCTCTTTTTGTGCAAGTaGATTACACGGTTTTGTCTG +
Preference number: 5 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSLFLCK*ITRFCL
Trigger: CAGACAAAACCGTGTAATCAACTTGCACAAAAAGAG...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp AGTCAGATACATTTCCCTGTAGGAGTCACTTCCTTCCCGGGATTAAAGCTGTCCGGAATCTGCTCCTGTTaGATTAGGTCTGTGTTTATA +
Preference number: 5 (lower is better)
Translates to: SQIHFPVGVTSFPGLKLSGICSC*IRSVFI
Trigger: TATAAACACAGACCTAATCAAACAGGAGCAGATTCC...GGACAGCTTTAATCCCGGGAAGGAAGTGACTCCTACAGGGAAATGTATCTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTGGTCGTTTCGGTCGTTaGAGGGTATTGACAAGCTGC +
Preference number: 5 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFGRFGR*RVLTSC
Trigger: GCAGCTTGTCAATACCCTCAAACGACCGAAACGACC...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTGTGGGATCTCTCCCGTaGGGCTTTTTGGAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPVGSLP*GFLEVL
Trigger: AAGGACTTCCAAAAAGCCCAACGGGAGAGATCCCAC...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTGAGAGGAACAGGAACTaGCGTGCCTGGTCGTTATCT +
Preference number: 5 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPERNRN*RAWSLS
Trigger: AGATAACGACCAGGCACGCAAGTTCCTGTTCCTCTC...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACCTGTGTACCCTCTTTTaGTGCAAGTTGATTACACGG +
Preference number: 5 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHLCTLF*CKLITR
Trigger: CCGTGTAATCAACTTGCACAAAAAGAGGGTACACAG...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTAAGGGACCATCTCCCTaGGGTAAAGTGTCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFKGPSP*GKVSSR
Trigger: CCTGCTTGACACTTTACCCAAGGGAGATGGTCCCTT...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCAGGCTCCAATTAACTTaGACCTCTTCTTTTCATATC +
Preference number: 5 (lower is better)
Translates to: CLHASVDTENNVYISRKVRLQLT*TSSFHI
Trigger: GATATGAAAAGAAGAGGTCAAAGTTAATTGGAGCCT...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGTCTGCACGCTTCAGTGGACACGGAGAACAATGTCTACATCTCTAGAAAAGTCAAGATCATCTACATTTaGCCCAGCATCAATCTTAGT +
Preference number: 5 (lower is better)
Translates to: CLHASVDTENNVYISRKVKIIYI*PSINLS
Trigger: ACTAAGATTGATGCTGGGCAAAATGTAGATGATCTT...GACTTTTCTAGAGATGTAGACATTGTTCTCCGTGTCCACTGAAGCGTGCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCTCGAAGGCCTTTACTTaGGAAGACATTGAGAAATGC +
Preference number: 5 (lower is better)
Translates to: ALNSFAILEMAIISLAGLSKAFT*EDIEKC
Trigger: GCATTTCTCAATGTCTTCCAAAGTAAAGGCCTTCGA...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCATTGGAAGGTGCTATTaGGAAGGTTTTCTCGTACCT +
Preference number: 5 (lower is better)
Translates to: ALNSFAILEMAIISLAGLIGRCY*EGFLVP
Trigger: AGGTACGAGAAAACCTTCCAAATAGCACCTTCCAAT...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp ATGTACAAAGCGTACTGGTGGTTTAACATACAAGAAGGTTGCTGTCCTTTGCACGGAATCTGCTCCTGTTaGATTAGGTCTGTGTTTATA +
Preference number: 5 (lower is better)
Translates to: MYKAYWWFNIQEGCCPLHGICSC*IRSVFI
Trigger: TATAAACACAGACCTAATCAAACAGGAGCAGATTCC...GTGCAAAGGACAGCAACCTTCTTGTATGTTAAACCACCAGTACGCTTTGTACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp GCTTTGAATTCTTTTGCCATCCTTGAGATGGCAATAATTTCACTTGCTGGTCTCGTTGATTACACGGTTTaGTCTGACTTCAAAAGCACA +
Preference number: 5 (lower is better)
Translates to: ALNSFAILEMAIISLAGLVDYTV*SDFKST
Trigger: TGTGCTTTTGAAGTCAGACAAAACCGTGTAATCAAC...GAGACCAGCAAGTGAAATTATTGCCATCTCAAGGATGGCAAAAGAATTCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TGCCCACAACATAATGAAAGATCATCTACATTTTGCCCAGCATCAATCTTAGTCTTACTTTGGAAGACATaGAGAAATGCATCGCAAGAA +
Preference number: 5 (lower is better)
Translates to: CPQHNERSSTFCPASILVLLWKT*RNASQE
Trigger: TTCTTGCGATGCATTTCTCAATGTCTTCCAAAGTAA...GACTAAGATTGATGCTGGGCAAAATGTAGATGATCTTTCATTATGTTGTGGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTGCAATAAACTCCAACTaGATGTATACTGTCAATCGC +
Preference number: 5 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFAINSN*MYTVNR
Trigger: GCGATTGACAGTATACATCAAGTTGGAGTTTATTGC...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp TTATCTAATTGGAAGGTGCTATTTGGAAGGTTTTCTCGTACCTCAAACTTTCCTAGGCTCCAATTAACTTaGACCTCTTCTTTTCATATC +
Preference number: 5 (lower is better)
Translates to: LSNWKVLFGRFSRTSNFPRLQLT*TSSFHI
Trigger: GATATGAAAAGAAGAGGTCAAAGTTAATTGGAGCCT...AGGAAAGTTTGAGGTACGAGAAAACCTTCCAAATAGCACCTTCCAATTAGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS-3UTR CAA 90 bp CATTTGAATATAAAACAGGCGTTATCACAGATGTACAAAGCGTACTGGTGGTTTCCAGAAAAAGCTGTTTaGTTTCTGATAAATGGATCC +
Preference number: 5 (lower is better)
Translates to: HLNIKQALSQMYKAYWWFPEKAV*FLINGS
Trigger: GGATCCATTTATCAGAAACAAAACAGCTTTTTCTGG...AAACCACCAGTACGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS GCA 72 bp TCCAGCGACGGCGGCCAGTTCGTGACCACGCCCAGCTaGTCTCCGCGCATGGCCAGCATCTGGGCCCCCTCC +
Preference number: 6 (lower is better)
Translates to: SSDGGQFVTTPS*SPRMASIWAPS
Trigger: GGAGGGGGCCCAGATGCTGGCCATGCGCGGAGAGCAGCTGGGCGTGGTCACGAACTGGCCGCCGTCGCTGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 72 bp GGGCGCCTTGGGCGAGATGGTGCCCCACCTCTGCAGTaGGGCCTCCAGCGACGGCGGCCAGTTCGTGACCAC +
Preference number: 6 (lower is better)
Translates to: GRLGRDGAPPLQ*GLQRRRPVRDH
Trigger: GTGGTCACGAACTGGCCGCCGTCGCTGGAGGCCGCACTGCAGAGGTGGGGCACCATCTCGCCCAAGGCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 72 bp AGGCAGGGCGCCTTGGGCGAGATGGTGCCCCACCTCTaGAGTGCGGCCTCCAGCGACGGCGGCCAGTTCGTG +
Preference number: 6 (lower is better)
Translates to: RQGALGEMVPHL*SAASSDGGQFV
Trigger: CACGAACTGGCCGCCGTCGCTGGAGGCCGCACTGCAGAGGTGGGGCACCATCTCGCCCAAGGCGCCCTGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 72 bp CCATGGTGGTCAGGCAGGGCGCCTTGGGCGAGATGGTaGCCCACCTCTGCAGTGCGGCCTCCAGCGACGGCG +
Preference number: 6 (lower is better)
Translates to: PWWSGRAPWARW*PTSAVRPPATA
Trigger: CGCCGTCGCTGGAGGCCGCACTGCAGAGGTGGGGCACCATCTCGCCCAAGGCGCCCTGCCTGACCACCATGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS TCA 72 bp TCTGCAGTGCGGCCTCCAGCGACGGCGGCCAGTTCGTaGCCACGCCCAGCTGCTCTCCGCGCATGGCCAGCA +
Preference number: 6 (lower is better)
Translates to: SAVRPPATAASS*PRPAALRAWPA
Trigger: TGCTGGCCATGCGCGGAGAGCAGCTGGGCGTGGTCACGAACTGGCCGCCGTCGCTGGAGGCCGCACTGCAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CCA 72 bp TGTCCATGGTGGTCAGGCAGGGCGCCTTGGGCGAGATaGTGCCCCACCTCTGCAGTGCGGCCTCCAGCGACG +
Preference number: 6 (lower is better)
Translates to: CPWWSGRAPWAR*CPTSAVRPPAT
Trigger: CGTCGCTGGAGGCCGCACTGCAGAGGTGGGGCACCATCTCGCCCAAGGCGCCCTGCCTGACCACCATGGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CAA 72 bp CCATCCCCGGTCTCCATGAGCTCGGCGTTGCCGTACTaGGGCGCTGTCCGGGACCCCGTGGAACCCTGCGGT +
Preference number: 6 (lower is better)
Translates to: PSPVSMSSALPY*GAVRDPVEPCG
Trigger: ACCGCAGGGTTCCACGGGGTCCCGGACAGCGCCCAAGTACGGCAACGCCGAGCTCATGGAGACCGGGGATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CAA 90 bp TCGGCGTTGTGCCTGCGCCCGCTGACCACCATGAGGCCATCCATCTaGCCCACCACGAAGACGAGGCCTCCGGGACCCACGAACCCCAGC +
Preference number: 6 (lower is better)
Translates to: SALCLRPLTTMRPSI*PTTKTRPPGPTNPS
Trigger: GCTGGGGTTCGTGGGTCCCGGAGGCCTCGTCTTCGTGGTGGGCAAGATGGATGGCCTCATGGTGGTCAGCGGGCGCAGGCACAACGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CCA 72 bp ACCACGCCCAGCTGCTCTCCGCGCATGGCCAGCATCTaGGCCCCCTCCGGCTTTGGTTGGTTCGGATCCGGT +
Preference number: 6 (lower is better)
Translates to: TTPSCSPRMASI*APSGFGWFGSG
Trigger: ACCGGATCCGAACCAACCAAAGCCGGAGGGGGCCCAGATGCTGGCCATGCGCGGAGAGCAGCTGGGCGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CCA 72 bp TCCCGTTGGTGTCCATGGTGGTCAGGCAGGGCGCCTTaGGCGAGATGGTGCCCCACCTCTGCAGTGCGGCCT +
Preference number: 6 (lower is better)
Translates to: SRWCPWWSGRAP*ARWCPTSAVRP
Trigger: AGGCCGCACTGCAGAGGTGGGGCACCATCTCGCCCAAGGCGCCCTGCCTGACCACCATGGACACCAACGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CAA 90 bp GACGTGGTGGAGCCGTGGATGGCCTGGCTGATCCAGTGCTCCATATaGATGCTGCCCTGGCTGGAGGTGGGGGTGCCCTGGGAGTCCCCC +
Preference number: 6 (lower is better)
Translates to: DVVEPWMAWLIQCSI*MLPWLEVGVPWESP
Trigger: GGGGGACTCCCAGGGCACCCCCACCTCCAGCCAGGGCAGCATCAATATGGAGCACTGGATCAGCCAGGCCATCCACGGCTCCACCACGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CAA 90 bp ACTGGTACTCCATCCCCGGTCTCCATGAGCTCGGCGTTGCCGTACTaGGGCGCTGTCCGGGACCCCGTGGAACCCTGCGGTCTCTCCACC +
Preference number: 6 (lower is better)
Translates to: TGTPSPVSMSSALPY*GAVRDPVEPCGLST
Trigger: GGTGGAGAGACCGCAGGGTTCCACGGGGTCCCGGACAGCGCCCAAGTACGGCAACGCCGAGCTCATGGAGACCGGGGATGGAGTACCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 72 bp GAGGCGGAGGAAGGAGTGACAGGAGCCCGGCGTTCTTaGGGCAAAGCTTGGTCCACCCTCGGAGGCTGCGGA +
Preference number: 6 (lower is better)
Translates to: EAEEGVTGARRS*GKAWSTLGGCG
Trigger: TCCGCAGCCTCCGAGGGTGGACCAAGCTTTGCCGCAAGAACGCCGGGCTCCTGTCACTCCTTCCTCCGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280886.12
ENST00000381496.7
CDS CCA 72 bp CGGCGTTGCCGTACTTGGGCGCTGTCCGGGACCCCGTaGAACCCTGCGGTCTCTCCACCTGTATCGAGTGCT +
Preference number: 6 (lower is better)
Translates to: RRCRTWALSGTP*NPAVSPPVSSA
Trigger: AGCACTCGATACAGGTGGAGAGACCGCAGGGTTCCACGGGGTCCCGGACAGCGCCCAAGTACGGCAACGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CCA 72 bp AGTCCATGCATGGAGAGGACACCCCGGCCCGGGGGCTaGTTACTGTCATCCGTGGGCCTCCGGATGGCCACA +
Preference number: 6 (lower is better)
Translates to: SPCMERTPRPGG*LLSSVGLRMAT
Trigger: TGTGGCCATCCGGAGGCCCACGGATGACAGTAACCAGCCCCCGGGCCGGGGTGTCCTCTCCATGCATGGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000421992.2
ENST00000634311.1
CDS CAA 90 bp CGGCTACTTACTGGTACTCCATCCCCGGTCTCCATGAGCTCGGCGTaGCCGTACTTGGGCGCTGTCCGGGACCCCGTGGAACCCTGCGGT +
Preference number: 6 (lower is better)
Translates to: RLLTGTPSPVSMSSA*PYLGAVRDPVEPCG
Trigger: ACCGCAGGGTTCCACGGGGTCCCGGACAGCGCCCAAGTACGGCAACGCCGAGCTCATGGAGACCGGGGATGGAGTACCAGTAAGTAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS TCA 72 bp CCCGGCTACTTACTGGTACTCCATCCCCGGTCTCCATaGGCTCGGCGTTGCCGTACTTGGGCGCTGTCCGGG +
Preference number: 6 (lower is better)
Translates to: PGYLLVLHPRSP*ARRCRTWALSG
Trigger: CCCGGACAGCGCCCAAGTACGGCAACGCCGAGCTCATGGAGACCGGGGATGGAGTACCAGTAAGTAGCCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 72 bp CCGTACTTGGGCGCTGTCCGGGACCCCGTGGAACCCTaGGGTCTCTCCACCTGTATCGAGTGCTCTGAGGTG +
Preference number: 6 (lower is better)
Translates to: PYLGAVRDPVEP*GLSTCIECSEV
Trigger: CACCTCAGAGCACTCGATACAGGTGGAGAGACCGCAGGGTTCCACGGGGTCCCGGACAGCGCCCAAGTACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 72 bp CACCCCGAAACGAAAGTAAAACAGAGGCCGGTTCCCTaGGGTGCTGGCCACCCGCTCCCGAGCCGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: HPETKVKQRPVP*GAGHPLPSRSF
Trigger: GAAGCTGCGGCTCGGGAGCGGGTGGCCAGCACCGCAGGGAACCGGCCTCTGTTTTACTTTCGTTTCGGGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634311.1
CDS CCA 72 bp CGAGCCGCAGCTTCTCGGACGTCGCACACCCCGATGTaGGCAGAGCGGAATGTTCTCCTCGGCGCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: RAAASRTSHTPM*AERNVLLGAPS
Trigger: TGAAGGAGCGCCGAGGAGAACATTCCGCTCTGCCCACATCGGGGTGTGCGACGTCCGAGAAGCTGCGGCTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634311.1
CDS CAA 72 bp ACTGGTACTCCATCCCCGGTCTCCATGAGCTCGGCGTaGCCGTACTTGGGCGCTGTCCGGGACCCCGTGGAA +
Preference number: 6 (lower is better)
Translates to: TGTPSPVSMSSA*PYLGAVRDPVE
Trigger: TTCCACGGGGTCCCGGACAGCGCCCAAGTACGGCAACGCCGAGCTCATGGAGACCGGGGATGGAGTACCAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CAA 90 bp TTCATGGGTTCTACGGCCAGCGCAGTGGCCACGATGTCGTCGGCGTaGTGCCTGCGCCCGCTGACCACCATGAGGCCATCCATCTTGCCC +
Preference number: 6 (lower is better)
Translates to: FMGSTASAVATMSSA*CLRPLTTMRPSILP
Trigger: GGGCAAGATGGATGGCCTCATGGTGGTCAGCGGGCGCAGGCACAACGCCGACGACATCGTGGCCACTGCGCTGGCCGTAGAACCCATGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 72 bp GACGTGGTGGAGCCGTGGATGGCCTGGCTGATCCAGTaGTCCATATTGATGCTGCCCTGGCTGGAGGTGGGG +
Preference number: 6 (lower is better)
Translates to: DVVEPWMAWLIQ*SILMLPWLEVG
Trigger: CCCCACCTCCAGCCAGGGCAGCATCAATATGGAGCACTGGATCAGCCAGGCCATCCACGGCTCCACCACGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 72 bp CGAAACGAAAGTAAAACAGAGGCCGGTTCCCTGCGGTaGTGGCCACCCGCTCCCGAGCCGCAGCTTCTCGGA +
Preference number: 6 (lower is better)
Translates to: RNESKTEAGSLR*WPPAPEPQLLG
Trigger: TCCGAGAAGCTGCGGCTCGGGAGCGGGTGGCCAGCACCGCAGGGAACCGGCCTCTGTTTTACTTTCGTTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634311.1
CDS CCA 72 bp AACGAAAGTAAAACAGAGGCCGGTTCCCTGCGGTGCTaGCCACCCGCTCCCGAGCCGCAGCTTCTCGGACGT +
Preference number: 6 (lower is better)
Translates to: NESKTEAGSLRC*PPAPEPQLLGR
Trigger: ACGTCCGAGAAGCTGCGGCTCGGGAGCGGGTGGCCAGCACCGCAGGGAACCGGCCTCTGTTTTACTTTCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634311.1
CDS CCA 72 bp GAGGAGGTGGTGGACGTGGTGGAGCCGTGGATGGCCTaGCTGATCCAGTGCTCCATATTGATGCTGCCCTGG +
Preference number: 6 (lower is better)
Translates to: EEVVDVVEPWMA*LIQCSILMLPW
Trigger: CCAGGGCAGCATCAATATGGAGCACTGGATCAGCCAGGCCATCCACGGCTCCACCACGTCCACCACCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CAA 90 bp AGGTGGCCCCTCTCCATCAGCATCACGGCGATCTTCTCAGCTCTCTaGTGCAGCTGCACGCAGGTCAGCGAGTTCGCTATCGCACCCCGA +
Preference number: 6 (lower is better)
Translates to: RWPLSISITAIFSAL*CSCTQVSEFAIAPR
Trigger: TCGGGGTGCGATAGCGAACTCGCTGACCTGCGTGCAGCTGCACAAGAGAGCTGAGAAGATCGCCGTGATGCTGATGGAGAGGGGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CCA 72 bp CGGGGTTGGTTTCCAGCTCAGAGGGCGGGATCAGGATaGACTGGTGCCCAGAATACACACTGCAGAGGCACC +
Preference number: 6 (lower is better)
Translates to: RGWFPAQRAGSG*TGAQNTHCRGT
Trigger: GGTGCCTCTGCAGTGTGTATTCTGGGCACCAGTCCATCCTGATCCCGCCCTCTGAGCTGGAAACCAACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS TCA 72 bp CGTTCTGCACAGCTGAGGAACCCCGTCTGGCTTCACTaGACACATGATGGCTCCAGGCATCACGAGGCCGAC +
Preference number: 6 (lower is better)
Translates to: RSAQLRNPVWLH*THDGSRHHEAD
Trigger: GTCGGCCTCGTGATGCCTGGAGCCATCATGTGTTCAGTGAAGCCAGACGGGGTTCCTCAGCTGTGCAGAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000421992.2
ENST00000634311.1
CDS GCA 72 bp CACGACCAGGGACCTGCGTTTGGAAGGCATAGGCACTaGCATCTTCCGCTCTTTGTGTTTGGCCAGAGCCGC +
Preference number: 6 (lower is better)
Translates to: HDQGPAFGRHRH*HLPLFVFGQSR
Trigger: GCGGCTCTGGCCAAACACAAAGAGCGGAAGATGGCAGTGCCTATGCCTTCCAAACGCAGGTCCCTGGTCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 72 bp CCCGTGGAACCCTGCGGTCTCTCCACCTGTATCGAGTaGTCTGAGGTGTACGTGGTTACGTCAGGAGGTGCA +
Preference number: 6 (lower is better)
Translates to: PVEPCGLSTCIE*SEVYVVTSGGA
Trigger: TGCACCTCCTGACGTAACCACGTACACCTCAGAGCACTCGATACAGGTGGAGAGACCGCAGGGTTCCACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 72 bp GCCAGAGAGGCCATAGTAGGACGTGCCCGTCGCAACTaGACACACACACAGCTCCCCGATCTCATCCGTTCT +
Preference number: 6 (lower is better)
Translates to: AREAIVGRARRN*THTQLPDLIRS
Trigger: AGAACGGATGAGATCGGGGAGCTGTGTGTGTGTGCAGTTGCGACGGGCACGTCCTACTATGGCCTCTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000421992.2
ENST00000634311.1
CDS GCA 72 bp AGCATCACGGCGATCTTCTCAGCTCTCTTGTGCAGCTaGACGCAGGTCAGCGAGTTCGCTATCGCACCCCGA +
Preference number: 6 (lower is better)
Translates to: SITAIFSALLCS*TQVSEFAIAPR
Trigger: TCGGGGTGCGATAGCGAACTCGCTGACCTGCGTGCAGCTGCACAAGAGAGCTGAGAAGATCGCCGTGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 72 bp GAGCGGAATGTTCTCCTCGGCGCTCCTTCACTGTGCTaGAGTCTACACCGAACCACGGCAGCTCCATTCGCT +
Preference number: 6 (lower is better)
Translates to: ERNVLLGAPSLC*SLHRTTAAPFA
Trigger: AGCGAATGGAGCTGCCGTGGTTCGGTGTAGACTGCAGCACAGTGAAGGAGCGCCGAGGAGAACATTCCGCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634311.1
CDS GCA 72 bp GCAGAGCGGAATGTTCTCCTCGGCGCTCCTTCACTGTaGTGCAGTCTACACCGAACCACGGCAGCTCCATTC +
Preference number: 6 (lower is better)
Translates to: AERNVLLGAPSL*CSLHRTTAAPF
Trigger: GAATGGAGCTGCCGTGGTTCGGTGTAGACTGCAGCACAGTGAAGGAGCGCCGAGGAGAACATTCCGCTCTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634311.1
CDS CAA 72 bp GAAGGCATAGGCACTGCCATCTTCCGCTCTTTGTGTTaGGCCAGAGCCGCCTGGACAGCTTCCGTGTGGACG +
Preference number: 6 (lower is better)
Translates to: EGIGTAIFRSLC*ARAAWTASVWT
Trigger: CGTCCACACGGAAGCTGTCCAGGCGGCTCTGGCCAAACACAAAGAGCGGAAGATGGCAGTGCCTATGCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CAA 72 bp GCGTCCATCGAGGTCTGCACGACCAGGGACCTGCGTTaGGAAGGCATAGGCACTGCCATCTTCCGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: ASIEVCTTRDLR*EGIGTAIFRSL
Trigger: CAAAGAGCGGAAGATGGCAGTGCCTATGCCTTCCAAACGCAGGTCCCTGGTCGTGCAGACCTCGATGGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CAA 90 bp CTGCGTTTGGAAGGCATAGGCACTGCCATCTTCCGCTCTTTGTGTTaGGCCAGAGCCGCCTGGACAGCTTCCGTGTGGACGTCTGACCGA +
Preference number: 6 (lower is better)
Translates to: LRLEGIGTAIFRSLC*ARAAWTASVWTSDR
Trigger: TCGGTCAGACGTCCACACGGAAGCTGTCCAGGCGGCTCTGGCCAAACACAAAGAGCGGAAGATGGCAGTGCCTATGCCTTCCAAACGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CAA 90 bp AGGGACCTGCGTTTGGAAGGCATAGGCACTGCCATCTTCCGCTCTTaGTGTTTGGCCAGAGCCGCCTGGACAGCTTCCGTGTGGACGTCT +
Preference number: 6 (lower is better)
Translates to: RDLRLEGIGTAIFRS*CLARAAWTASVWTS
Trigger: AGACGTCCACACGGAAGCTGTCCAGGCGGCTCTGGCCAAACACAAAGAGCGGAAGATGGCAGTGCCTATGCCTTCCAAACGCAGGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 72 bp CTGCACACACACACAGCTCCCCGATCTCATCCGTTCTaGACAGCTGAGGAACCCCGTCTGGCTTCACTGAAC +
Preference number: 6 (lower is better)
Translates to: LHTHTAPRSHPF*TAEEPRLASLN
Trigger: GTTCAGTGAAGCCAGACGGGGTTCCTCAGCTGTGCAGAACGGATGAGATCGGGGAGCTGTGTGTGTGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000421992.2
ENST00000634311.1
CDS GCA 72 bp TGTTCTTGGTCATGCCAGAGAGGCCATAGTAGGACGTaGCCGTCGCAACTGCACACACACACAGCTCCCCGA +
Preference number: 6 (lower is better)
Translates to: CSWSCQRGHSRT*PSQLHTHTAPR
Trigger: TCGGGGAGCTGTGTGTGTGTGCAGTTGCGACGGGCACGTCCTACTATGGCCTCTCTGGCATGACCAAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000421992.2
ENST00000634311.1
CDS GCA 72 bp GTTTCCAGCTCAGAGGGCGGGATCAGGATGGACTGGTaGCCAGAATACACACTGCAGAGGCACCAGAGGACA +
Preference number: 6 (lower is better)
Translates to: VSSSEGGIRMDW*PEYTLQRHQRT
Trigger: TGTCCTCTGGTGCCTCTGCAGTGTGTATTCTGGGCACCAGTCCATCCTGATCCCGCCCTCTGAGCTGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CCA 72 bp TTGGTTTCCAGCTCAGAGGGCGGGATCAGGATGGACTaGTGCCCAGAATACACACTGCAGAGGCACCAGAGG +
Preference number: 6 (lower is better)
Translates to: LVSSSEGGIRMD*CPEYTLQRHQR
Trigger: CCTCTGGTGCCTCTGCAGTGTGTATTCTGGGCACCAGTCCATCCTGATCCCGCCCTCTGAGCTGGAAACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CCA 72 bp TGTACTGACTCACGGCAAGAAGCCACAAGGCGGGGTTaGTTTCCAGCTCAGAGGGCGGGATCAGGATGGACT +
Preference number: 6 (lower is better)
Translates to: CTDSRQEATRRG*FPAQRAGSGWT
Trigger: AGTCCATCCTGATCCCGCCCTCTGAGCTGGAAACCAACCCCGCCTTGTGGCTTCTTGCCGTGAGTCAGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CAA 72 bp CGTTTGGAAGGCATAGGCACTGCCATCTTCCGCTCTTaGTGTTTGGCCAGAGCCGCCTGGACAGCTTCCGTG +
Preference number: 6 (lower is better)
Translates to: RLEGIGTAIFRS*CLARAAWTASV
Trigger: CACGGAAGCTGTCCAGGCGGCTCTGGCCAAACACAAAGAGCGGAAGATGGCAGTGCCTATGCCTTCCAAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CAA 72 bp CTCCGCGCATGGCCAGCATCTGGGCCCCCTCCGGCTTaGGTTGGTTCGGATCCGGTTGTTGAACTTCTAATA +
Preference number: 6 (lower is better)
Translates to: LRAWPASGPPPA*VGSDPVVELLI
Trigger: TATTAGAAGTTCAACAACCGGATCCGAACCAACCAAAGCCGGAGGGGGCCCAGATGCTGGCCATGCGCGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS TCA 72 bp GGAACCCTGCGGTCTCTCCACCTGTATCGAGTGCTCTaGGGTGTACGTGGTTACGTCAGGAGGTGCAGAATG +
Preference number: 6 (lower is better)
Translates to: GTLRSLHLYRVL*GVRGYVRRCRM
Trigger: CATTCTGCACCTCCTGACGTAACCACGTACACCTCAGAGCACTCGATACAGGTGGAGAGACCGCAGGGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS TCA 72 bp CGTAGAGGGCATCATGGCGCTCTCCATTTGCATCTGTaGGCTCAGTTCTCCGCAGGAACCCCAAGTAGCCTG +
Preference number: 6 (lower is better)
Translates to: RRGHHGALHLHL*AQFSAGTPSSL
Trigger: CAGGCTACTTGGGGTTCCTGCGGAGAACTGAGCTCACAGATGCAAATGGAGAGCGCCATGATGCCCTCTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 72 bp TCCATCAGCATCACGGCGATCTTCTCAGCTCTCTTGTaGAGCTGCACGCAGGTCAGCGAGTTCGCTATCGCA +
Preference number: 6 (lower is better)
Translates to: SISITAIFSALL*SCTQVSEFAIA
Trigger: TGCGATAGCGAACTCGCTGACCTGCGTGCAGCTGCACAAGAGAGCTGAGAAGATCGCCGTGATGCTGATGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CCA 72 bp GGGACCCACGAACCCCAGCAAGCCTGTCCTTATGAATaGGTATTCACTGATCGGAGCCCCGGAGCTTGTCAT +
Preference number: 6 (lower is better)
Translates to: GTHEPQQACPYE*VFTDRSPGACH
Trigger: ATGACAAGCTCCGGGGCTCCGATCAGTGAATACCCATTCATAAGGACAGGCTTGCTGGGGTTCGTGGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CAA 72 bp CTCTCCATCAGCATCACGGCGATCTTCTCAGCTCTCTaGTGCAGCTGCACGCAGGTCAGCGAGTTCGCTATC +
Preference number: 6 (lower is better)
Translates to: LSISITAIFSAL*CSCTQVSEFAI
Trigger: GATAGCGAACTCGCTGACCTGCGTGCAGCTGCACAAGAGAGCTGAGAAGATCGCCGTGATGCTGATGGAGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CAA 90 bp CCAGCTGCTCTCCGCGCATGGCCAGCATCTGGGCCCCCTCCGGCTTaGGTTGGTTCGGATCCGGTTGTTGAACTTCTAATAATTCTTCAA +
Preference number: 6 (lower is better)
Translates to: PAALRAWPASGPPPA*VGSDPVVELLIILQ
Trigger: TTGAAGAATTATTAGAAGTTCAACAACCGGATCCGAACCAACCAAAGCCGGAGGGGGCCCAGATGCTGGCCATGCGCGGAGAGCAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS TCA 72 bp ACACACAGCTCCCCGATCTCATCCGTTCTGCACAGCTaGGGAACCCCGTCTGGCTTCACTGAACACATGATG +
Preference number: 6 (lower is better)
Translates to: THSSPISSVLHS*GTPSGFTEHMM
Trigger: CATCATGTGTTCAGTGAAGCCAGACGGGGTTCCTCAGCTGTGCAGAACGGATGAGATCGGGGAGCTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000421992.2
ENST00000634311.1
CDS GCA 72 bp GCAGCGCAGTCCTCGTCACCGTCACACCCAGCACACTaGCATCCTTACACGTCTTGTACTCAATATACGCAG +
Preference number: 6 (lower is better)
Translates to: AAQSSSPSHPAH*HPYTSCTQYTQ
Trigger: CTGCGTATATTGAGTACAAGACGTGTAAGGATGGCAGTGTGCTGGGTGTGACGGTGACGAGGACTGCGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CCA 72 bp CGGAGCTTGTCATGGGAAACACCTCAAAGGTGTTCTTaGTCATGCCAGAGAGGCCATAGTAGGACGTGCCCG +
Preference number: 6 (lower is better)
Translates to: RSLSWETPQRCS*SCQRGHSRTCP
Trigger: CGGGCACGTCCTACTATGGCCTCTCTGGCATGACCAAGAACACCTTTGAGGTGTTTCCCATGACAAGCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CCA 72 bp GGAACACCAGTGCCACCCTATCTCCAGGCCGGACCATaGGTTCCTGCTTTGTGCCTAATTTGTGTAGAATGC +
Preference number: 6 (lower is better)
Translates to: GTPVPPYLQAGP*VPALCLICVEC
Trigger: GCATTCTACACAAATTAGGCACAAAGCAGGAACCCATGGTCCGGCCTGGAGATAGGGTGGCACTGGTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CCA 72 bp TGTGGACACGCTGAAGTCGAGATATGCAAGAGTGTCTaGGTTGCAAGGTTTGCAGATCTGGGCAGGCCGCTT +
Preference number: 6 (lower is better)
Translates to: CGHAEVEICKSV*VARFADLGRPL
Trigger: AAGCGGCCTGCCCAGATCTGCAAACCTTGCAACCCAGACACTCTTGCATATCTCGACTTCAGCGTGTCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS TCA 72 bp CGTCCGCCACTATCAGCATTCGCAGAGAGGAGAGGTTaGTGTCTCTCTGATCTCTGTGTGCTACTAATGCCC +
Preference number: 6 (lower is better)
Translates to: RPPLSAFAERRG*CLSDLCVLLMP
Trigger: GGGCATTAGTAGCACACAGAGATCAGAGAGACATCAACCTCTCCTCTCTGCGAATGCTGATAGTGGCGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000421992.2
ENST00000634311.1
CDS TCA 72 bp GGAAGTATCTTTCCCGATTCCATCAGGGGCAGACTATaGGGGGATCCTCTTTCCACTAAGCGGACTCTGTCG +
Preference number: 6 (lower is better)
Translates to: GSIFPDSIRGRL*GDPLSTKRTLS
Trigger: CGACAGAGTCCGCTTAGTGGAAAGAGGATCCCCTCATAGTCTGCCCCTGATGGAATCGGGAAAGATACTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CAA 72 bp TTTGTTTCTGATAAATGGATCCCACCAAGCGGGGTTTaGGGGAGGGTGTTTGCTGGCACCAAGGCCAGGCAA +
Preference number: 6 (lower is better)
Translates to: FVSDKWIPPSGV*GRVFAGTKARQ
Trigger: TTGCCTGGCCTTGGTGCCAGCAAACACCCTCCCCAAAACCCCGCTTGGTGGGATCCATTTATCAGAAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS TCA 72 bp TTGTCAGGATGCCATGCCAGAGCCCGACGTCCTTCTTaGAATCCAGCACATTCACAATGGTTTCAGCTTCCG +
Preference number: 6 (lower is better)
Translates to: LSGCHARARRPS*NPAHSQWFQLP
Trigger: CGGAAGCTGAAACCATTGTGAATGTGCTGGATTTCAAGAAGGACGTCGGGCTCTGGCATGGCATCCTGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000421992.2
ENST00000634311.1
CDS GCA 72 bp GGTGGTCGTTTCGGTCGTTTGAGGGTATTGACAAGCTaGTGGATTTTTGCTGACACCCGGCTACTTACTGGT +
Preference number: 6 (lower is better)
Translates to: GGRFGRLRVLTS*WIFADTRLLTG
Trigger: ACCAGTAAGTAGCCGGGTGTCAGCAAAAATCCAGCAGCTTGTCAATACCCTCAAACGACCGAAACGACCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 72 bp ACATGCATCATGTTCATGACGCTTGTCAGGATGCCATaGCAGAGCCCGACGTCCTTCTTGAAATCCAGCACA +
Preference number: 6 (lower is better)
Translates to: TCIMFMTLVRMP*QSPTSFLKSST
Trigger: TGTGCTGGATTTCAAGAAGGACGTCGGGCTCTGGCATGGCATCCTGACAAGCGTCATGAACATGATGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000421992.2
ENST00000634311.1
CDS CCA 72 bp GGGATCTCTCCCGTTGGGCTTTTTGGAAGTCCTTTATaGCAGGCGTCACTAGTCAAGGCTACAGTAACTCCA +
Preference number: 6 (lower is better)
Translates to: GISPVGLFGSPL*QASLVKATVTP
Trigger: TGGAGTTACTGTAGCCTTGACTAGTGACGCCTGCCATAAAGGACTTCCAAAAAGCCCAACGGGAGAGATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CAA 72 bp GTTTGCTGGCACCAAGGCCAGGCAATAAACTCCAACTaGATGTATACTGTCAATCGCCTGCAGCACACGGCT +
Preference number: 6 (lower is better)
Translates to: VCWHQGQAINSN*MYTVNRLQHTA
Trigger: AGCCGTGTGCTGCAGGCGATTGACAGTATACATCAAGTTGGAGTTTATTGCCTGGCCTTGGTGCCAGCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CCA 72 bp GGTCGTTTCGGTCGTTTGAGGGTATTGACAAGCTGCTaGATTTTTGCTGACACCCGGCTACTTACTGGTACT +
Preference number: 6 (lower is better)
Translates to: GRFGRLRVLTSC*IFADTRLLTGT
Trigger: AGTACCAGTAAGTAGCCGGGTGTCAGCAAAAATCCAGCAGCTTGTCAATACCCTCAAACGACCGAAACGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CAA 72 bp GCATCTTTAATGTGTGGGAACCAGTCTCGGGGCGGTTaGGAGAGATGTTTAGACTCTGTGACAAACCACAGC +
Preference number: 6 (lower is better)
Translates to: ASLMCGNQSRGG*ERCLDSVTNHS
Trigger: GCTGTGGTTTGTCACAGAGTCTAAACATCTCTCCAAACCGCCCCGAGACTGGTTCCCACACATTAAAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CCA 72 bp GTCTCTCCACCTGTATCGAGTGCTCTGAGGTGTACGTaGTTACGTCAGGAGGTGCAGAATGATTTTCTATGT +
Preference number: 6 (lower is better)
Translates to: VSPPVSSALRCT*LRQEVQNDFLC
Trigger: ACATAGAAAATCATTCTGCACCTCCTGACGTAACCACGTACACCTCAGAGCACTCGATACAGGTGGAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS GCA 72 bp CCATGGGTTCCTGCTTTGTGCCTAATTTGTGTAGAATaGTGTAAGCGACCTTCATACTTCTTGTCCACAGCT +
Preference number: 6 (lower is better)
Translates to: PWVPALCLICVE*CKRPSYFLSTA
Trigger: AGCTGTGGACAAGAAGTATGAAGGTCGCTTACAGCATTCTACACAAATTAGGCACAAAGCAGGAACCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CAA 72 bp TTACACGTCTTGTACTCAATATACGCAGTGTCGTTATaGGCATCTTTAATGTGTGGGAACCAGTCTCGGGGC +
Preference number: 6 (lower is better)
Translates to: LHVLYSIYAVSL*ASLMCGNQSRG
Trigger: GCCCCGAGACTGGTTCCCACACATTAAAGATGCCAATAACGACACTGCGTATATTGAGTACAAGACGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000634311.1
CDS CAA 72 bp ATGACCTCCTGTCGAAGGCCTTTACTTTGGAAGACATaGAGAAATGCATCGCAAGAAGAAATAGACCAGGGG +
Preference number: 6 (lower is better)
Translates to: MTSCRRPLLWKT*RNASQEEIDQG
Trigger: CCCCTGGTCTATTTCTTCTTGCGATGCATTTCTCAATGTCTTCCAAAGTAAAGGCCTTCGACAGGAGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280886.12
ENST00000381496.7
ENST00000421992.2
ENST00000634311.1
CDS CAA 72 bp AGTAATCTCTCTTCATTCATAAAATGTTATTTGCCCTaGTTGGAAGTATGCTCAAAGGTGTTCTTGGTCATG +
Preference number: 6 (lower is better)
Translates to: SNLSSFIKCYLP*LEVCSKVFLVM
Trigger: CATGACCAAGAACACCTTTGAGCATACTTCCAACAAGGGCAAATAACATTTTATGAATGAAGAGAGATTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421992.2