Pregenerated sensors for DIP2A-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000223692

Ensembl transcript IDs: ENST00000442434.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AGAGTGGGGTTCCATGTACTTCTACTCTTCATCTTCATCTTAATCTaGAGCAGACTCCAGTTTCTGTTGAAGACAGCATCTTTGTCACTG	+
Preference number: 5 (lower is better) Translates to: RVGFHVLLLFIFILI*SRLQFLLKTASLSL Trigger: CAGTGACAAAGATGCTGTCTTCAACAGAAACTGGAGTCTGCTTCAGATTAAGATGAAGATGAAGAGTAGAAGTACATGGAACCCCACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442434.1
CDS TCA 72 bp	ATGCCTAAAATGTGCAAGGTGCTGGAGACAGAAAGATaGGCAGATCAAACCTTCCTCTTGAAATGCTCCCTC	+
Preference number: 6 (lower is better) Translates to: MPKMCKVLETER*ADQTFLLKCSL Trigger: GAGGGAGCATTTCAAGAGGAAGGTTTGATCTGCTCATCTTTCTGTCTCCAGCACCTTGCACATTTTAGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442434.1
CDS TCA 72 bp	TGGAGACAGAAAGATGAGCAGATCAAACCTTCCTCTTaGAATGCTCCCTCTAATGATCTCACTTCCATCAAT	+
Preference number: 6 (lower is better) Translates to: WRQKDEQIKPSS*NAPSNDLTSIN Trigger: ATTGATGGAAGTGAGATCATTAGAGGGAGCATTTCAAGAGGAAGGTTTGATCTGCTCATCTTTCTGTCTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442434.1
CDS TCA 72 bp	TTCCATGTACTTCTACTCTTCATCTTCATCTTAATCTaGAGCAGACTCCAGTTTCTGTTGAAGACAGCATCT	+
Preference number: 6 (lower is better) Translates to: FHVLLLFIFILI*SRLQFLLKTAS Trigger: AGATGCTGTCTTCAACAGAAACTGGAGTCTGCTTCAGATTAAGATGAAGATGAAGAGTAGAAGTACATGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442434.1

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